AV780631 ( MPDL080a10_f )

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BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV780631  MPDL080a10_f
         (326 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_UPI0001985649 PREDICTED: similar to NRPB1 (RNA POLYMER...    86   1e-15
UniRef100_A7NVN6 DNA-directed RNA polymerase n=1 Tax=Vitis vinif...    86   1e-15
UniRef100_P18616 DNA-directed RNA polymerase II subunit RPB1 n=1...    83   1e-14
UniRef100_B9SXC0 DNA-directed RNA polymerase n=1 Tax=Ricinus com...    82   1e-14
UniRef100_C5YGY9 DNA-directed RNA polymerase n=1 Tax=Sorghum bic...    82   2e-14
UniRef100_C5Y387 DNA-directed RNA polymerase n=1 Tax=Sorghum bic...    77   8e-13
UniRef100_A7R1R1 DNA-directed RNA polymerase n=1 Tax=Vitis vinif...    75   3e-12
UniRef100_A5CB27 DNA-directed RNA polymerase n=1 Tax=Vitis vinif...    73   1e-11
UniRef100_UPI0000E12351 Os05g0151000 n=1 Tax=Oryza sativa Japoni...    72   1e-11
UniRef100_Q5WMZ9 DNA-directed RNA polymerase n=1 Tax=Oryza sativ...    72   1e-11
UniRef100_Q0DKN9 DNA-directed RNA polymerase n=1 Tax=Oryza sativ...    72   1e-11
UniRef100_A9U396 DNA-directed RNA polymerase n=1 Tax=Physcomitre...    65   3e-09
UniRef100_A9TK89 DNA-directed RNA polymerase n=1 Tax=Physcomitre...    64   5e-09
UniRef100_P35084 DNA-directed RNA polymerase II subunit rpb1 n=1...    59   2e-07
UniRef100_C1EA31 DNA-directed RNA polymerase n=1 Tax=Micromonas ...    58   3e-07
UniRef100_C1MI48 DNA-directed RNA polymerase n=1 Tax=Micromonas ...    56   1e-06
UniRef100_A4S3M0 DNA-directed RNA polymerase n=1 Tax=Ostreococcu...    56   1e-06
UniRef100_Q30BD9 DNA-directed RNA polymerase n=1 Tax=Glaucocysti...    54   5e-06
UniRef100_Q1L5X2 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    54   5e-06
graphical overview:
alignment
UniRef100_UPI0001985649 UniRef100_UPI0001985649 UniRef100_A7NVN6 UniRef100_A7NVN6 UniRef100_P18616 UniRef100_P18616 UniRef100_B9SXC0 UniRef100_B9SXC0 UniRef100_C5YGY9 UniRef100_C5YGY9 UniRef100_C5Y387 UniRef100_C5Y387 UniRef100_A7R1R1 UniRef100_A7R1R1 UniRef100_A5CB27 UniRef100_A5CB27 UniRef100_UPI0000E12351 UniRef100_UPI0000E12351 UniRef100_Q5WMZ9 UniRef100_Q5WMZ9 UniRef100_Q0DKN9 UniRef100_Q0DKN9 UniRef100_A9U396 UniRef100_A9U396 UniRef100_A9TK89 UniRef100_A9TK89 UniRef100_P35084 UniRef100_P35084 UniRef100_C1EA31 UniRef100_C1EA31 UniRef100_C1MI48 UniRef100_C1MI48 UniRef100_A4S3M0 UniRef100_A4S3M0 UniRef100_Q30BD9 UniRef100_Q30BD9