AV770257 ( MPD004d11_f )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV770257  MPD004d11_f
         (450 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_Q40065 LHCII type I protein n=1 Tax=Hordeum vulgare Re...    56   1e-06
UniRef100_C6TM32 Putative uncharacterized protein n=1 Tax=Glycin...    56   1e-06
UniRef100_Q9ZP08 Chlorophyll a/b binding protein n=1 Tax=Cicer a...    55   2e-06
UniRef100_Q41234 Chlorophyll a/b-binding protein n=1 Tax=Pinus t...    55   2e-06
UniRef100_Q1EPK5 Chlorophyll A-B binding protein (CAB), putative...    55   3e-06
UniRef100_Q1EP45 Chlorophyll A-B binding protein (CAB), putative...    55   3e-06
UniRef100_C8XPS1 Chloroplast light harvesting chlorophyll a/b bi...    55   3e-06
UniRef100_C1K5D0 Chloroplast chlorophyll A-B binding protein n=1...    55   3e-06
UniRef100_C0L2S1 Chlorophyll A/B binding protein n=1 Tax=Gardeni...    55   3e-06
UniRef100_B9RN67 Chlorophyll A/B binding protein, putative n=1 T...    55   3e-06
UniRef100_B9GSZ2 Predicted protein n=1 Tax=Populus trichocarpa R...    55   3e-06
UniRef100_A7QQL7 Chromosome undetermined scaffold_143, whole gen...    55   3e-06
UniRef100_A7PJV3 Chromosome chr12 scaffold_18, whole genome shot...    55   3e-06
UniRef100_A5BPB2 Putative uncharacterized protein n=1 Tax=Vitis ...    55   3e-06
UniRef100_A5BAI4 Chromosome undetermined scaffold_143, whole gen...    55   3e-06
UniRef100_A5B5I4 Putative uncharacterized protein n=1 Tax=Vitis ...    55   3e-06
UniRef100_Q9XQB3 LHCII type I chlorophyll a/b binding protein n=...    54   4e-06
UniRef100_Q93XK4 Chlorophyll a/b binding protein n=1 Tax=Pinus c...    54   4e-06
UniRef100_Q40788 Chlorophyll a/b binding protein n=1 Tax=Pinus c...    54   4e-06
UniRef100_Q32291 Chlorophyll A/B binding protein n=1 Tax=Gossypi...    54   4e-06
UniRef100_O64449 Light harvesting chlorophyll a/b-binding protei...    54   4e-06
UniRef100_C5IFT7 Chloroplast chlorophyll A/B binding protein n=1...    54   4e-06
UniRef100_A9PHD4 Light-harvesting complex II protein Lhcb1 n=2 T...    54   4e-06
UniRef100_P12471 Chlorophyll a-b binding protein, chloroplastic ...    54   4e-06
UniRef100_Q9LKI0 LHCII type I chlorophyll a/b-binding protein n=...    54   5e-06
UniRef100_O80388 Light-harvesting chlorophyll a/b-binding protei...    54   5e-06
UniRef100_B3G0G4 Chloroplast chlorophyll a/b-binding protein n=1...    54   5e-06
UniRef100_B9SF47 Chlorophyll A/B binding protein, putative n=1 T...    54   7e-06
UniRef100_B9S155 Chlorophyll A/B binding protein, putative n=1 T...    54   7e-06
UniRef100_A8QJP9 Chloroplast light-harvesting chlorophyll a/b bi...    54   7e-06
UniRef100_P15194 Chlorophyll a-b binding protein type 2 member 1...    54   7e-06
UniRef100_Q9LKH9 LHCII type I chlorophyll a/b-binding protein n=...    53   9e-06
UniRef100_Q43437 Photosystem II type I chlorophyll a/b-binding p...    53   9e-06
UniRef100_Q39831 Chlorophyll a/b-binding protein n=1 Tax=Glycine...    53   9e-06
UniRef100_Q1KLZ3 Putative chloroplast chlorophyll a/b-binding pr...    53   9e-06
UniRef100_O48657 Chlorophyll a/b-binding protein n=1 Tax=Fagus c...    53   9e-06
UniRef100_O04685 Chlorophyll a/b-binding protein n=1 Tax=Mesembr...    53   9e-06
UniRef100_C6TNE6 Putative uncharacterized protein n=1 Tax=Glycin...    53   9e-06
UniRef100_C6TLM4 Putative uncharacterized protein n=1 Tax=Glycin...    53   9e-06
UniRef100_C0PQF4 Putative uncharacterized protein n=1 Tax=Picea ...    53   9e-06
UniRef100_B9EXX3 Putative uncharacterized protein n=1 Tax=Oryza ...    53   9e-06
UniRef100_A9NPE9 Putative uncharacterized protein n=1 Tax=Picea ...    53   9e-06
UniRef100_A4ZGB5 Chloroplast chlorophyll a/b-binding protein (Fr...    53   9e-06
UniRef100_P15193 Chlorophyll a-b binding protein type 2 member 1...    53   9e-06
UniRef100_P27491 Chlorophyll a-b binding protein 7, chloroplasti...    53   9e-06
UniRef100_P08222 Chlorophyll a-b binding protein of LHCII type 1...    53   9e-06
UniRef100_P08221 Chlorophyll a-b binding protein of LHCII type I...    53   9e-06
graphical overview:
alignment
UniRef100_Q40065 UniRef100_Q40065 UniRef100_C6TM32 UniRef100_C6TM32 UniRef100_Q9ZP08 UniRef100_Q9ZP08 UniRef100_Q41234 UniRef100_Q41234 UniRef100_Q1EPK5 UniRef100_Q1EPK5 UniRef100_Q1EP45 UniRef100_Q1EP45 UniRef100_C8XPS1 UniRef100_C8XPS1 UniRef100_C1K5D0 UniRef100_C1K5D0 UniRef100_C0L2S1 UniRef100_C0L2S1 UniRef100_B9RN67 UniRef100_B9RN67 UniRef100_B9GSZ2 UniRef100_B9GSZ2 UniRef100_A7QQL7 UniRef100_A7QQL7 UniRef100_A7PJV3 UniRef100_A7PJV3 UniRef100_A5BPB2 UniRef100_A5BPB2 UniRef100_A5BAI4 UniRef100_A5BAI4 UniRef100_A5B5I4 UniRef100_A5B5I4 UniRef100_Q9XQB3 UniRef100_Q9XQB3 UniRef100_Q93XK4 UniRef100_Q93XK4 UniRef100_Q40788 UniRef100_Q40788 UniRef100_Q32291 UniRef100_Q32291 UniRef100_O64449 UniRef100_O64449 UniRef100_C5IFT7 UniRef100_C5IFT7 UniRef100_A9PHD4 UniRef100_A9PHD4 UniRef100_P12471 UniRef100_P12471 UniRef100_Q9LKI0 UniRef100_Q9LKI0 UniRef100_O80388 UniRef100_O80388 UniRef100_B3G0G4 UniRef100_B3G0G4 UniRef100_B9SF47 UniRef100_B9SF47 UniRef100_B9S155 UniRef100_B9S155 UniRef100_A8QJP9 UniRef100_A8QJP9 UniRef100_P15194 UniRef100_P15194 UniRef100_Q9LKH9 UniRef100_Q9LKH9 UniRef100_Q43437 UniRef100_Q43437 UniRef100_Q39831 UniRef100_Q39831 UniRef100_Q1KLZ3 UniRef100_Q1KLZ3 UniRef100_O48657 UniRef100_O48657 UniRef100_O04685 UniRef100_O04685 UniRef100_C6TNE6 UniRef100_C6TNE6 UniRef100_C6TLM4 UniRef100_C6TLM4 UniRef100_C0PQF4 UniRef100_C0PQF4 UniRef100_B9EXX3 UniRef100_B9EXX3 UniRef100_A9NPE9 UniRef100_A9NPE9 UniRef100_A4ZGB5 UniRef100_A4ZGB5 UniRef100_P15193 UniRef100_P15193 UniRef100_P27491 UniRef100_P27491 UniRef100_P08222 UniRef100_P08222