AV424940 ( MWM047d02_r )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV424940  MWM047d02_r
         (427 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_B8YLY7 Gag-Pol polyprotein n=1 Tax=Lotus japonicus Rep...   122   2e-44
UniRef100_B8YLY5 Gag-Pol polyprotein n=1 Tax=Medicago truncatula...   124   1e-40
UniRef100_B8YLY4 Gag-Pol polyprotein n=1 Tax=Medicago truncatula...   124   1e-40
UniRef100_B8YLY3 Gag-Pol polyprotein n=1 Tax=Medicago truncatula...   124   1e-40
UniRef100_B8YLY6 Gag-Pol polyprotein n=1 Tax=Medicago truncatula...   120   1e-38
UniRef100_Q6BCY1 Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA    87   2e-24
UniRef100_B0B0G3 Gag protein (Fragment) n=1 Tax=Cucumis melo Rep...    99   2e-19
UniRef100_A7PTT7 Chromosome undetermined scaffold_30, whole geno...    80   6e-19
UniRef100_Q2AA73 Polyprotein-like, related n=1 Tax=Asparagus off...    53   8e-10
UniRef100_Q2QP15 Retrotransposon protein, putative, Ty1-copia su...    54   3e-08
UniRef100_Q7XEC4 Retrotransposon protein, putative, Ty1-copia su...    55   1e-07
UniRef100_Q7XUF5 OJ991113_30.13 protein n=1 Tax=Oryza sativa Jap...    54   9e-07
UniRef100_Q8H023 Putative retrovirus-related pol polyprotein n=1...    50   1e-06
UniRef100_UPI0001983CB6 PREDICTED: hypothetical protein n=1 Tax=...    41   4e-06
UniRef100_A5BPE6 Putative uncharacterized protein n=1 Tax=Vitis ...    39   7e-06
graphical overview:
alignment
UniRef100_B8YLY7 UniRef100_B8YLY7 UniRef100_B8YLY7 UniRef100_B8YLY7 UniRef100_B8YLY5 UniRef100_B8YLY5 UniRef100_B8YLY5 UniRef100_B8YLY5 UniRef100_B8YLY4 UniRef100_B8YLY4 UniRef100_B8YLY4 UniRef100_B8YLY4 UniRef100_B8YLY3 UniRef100_B8YLY3 UniRef100_B8YLY3 UniRef100_B8YLY3 UniRef100_B8YLY6 UniRef100_B8YLY6 UniRef100_B8YLY6 UniRef100_B8YLY6 UniRef100_Q6BCY1 UniRef100_Q6BCY1 UniRef100_Q6BCY1 UniRef100_Q6BCY1 UniRef100_B0B0G3 UniRef100_B0B0G3 UniRef100_A7PTT7 UniRef100_A7PTT7 UniRef100_A7PTT7 UniRef100_A7PTT7 UniRef100_Q2AA73 UniRef100_Q2AA73 UniRef100_Q2AA73 UniRef100_Q2AA73 UniRef100_Q2QP15 UniRef100_Q2QP15 UniRef100_Q2QP15 UniRef100_Q2QP15 UniRef100_Q7XEC4 UniRef100_Q7XEC4 UniRef100_Q7XEC4 UniRef100_Q7XEC4 UniRef100_Q7XUF5 UniRef100_Q7XUF5 UniRef100_Q7XUF5 UniRef100_Q7XUF5 UniRef100_Q8H023 UniRef100_Q8H023 UniRef100_Q8H023 UniRef100_Q8H023 UniRef100_UPI0001983CB6 UniRef100_UPI0001983CB6 UniRef100_UPI0001983CB6 UniRef100_UPI0001983CB6