AV422998 ( MWM021b10_r )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV422998  MWM021b10_r
         (470 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_B7FJ53 Putative uncharacterized protein (Fragment) n=1...   264   3e-69
UniRef100_C6TK51 Putative uncharacterized protein n=1 Tax=Glycin...   253   5e-66
UniRef100_C6TD06 Putative uncharacterized protein n=1 Tax=Glycin...   252   1e-65
UniRef100_B9RJ42 Photosystem II 22 kDa protein, chloroplast, put...   238   2e-61
UniRef100_A9PIG1 Putative uncharacterized protein n=1 Tax=Populu...   226   6e-58
UniRef100_B2ZAP6 Putative photosystem II protein n=1 Tax=Gossypi...   223   5e-57
UniRef100_A7NVD7 Chromosome chr18 scaffold_1, whole genome shotg...   214   2e-54
UniRef100_A4L9I5 Putative photosystem II protein n=1 Tax=Gossypi...   214   3e-54
UniRef100_A4L9G7 Putative photosystem II protein n=1 Tax=Gossypi...   214   3e-54
UniRef100_Q02060 Photosystem II 22 kDa protein, chloroplastic n=...   210   3e-53
UniRef100_Q2LAH1 Chloroplast photosystem II 22 kDa component n=1...   191   2e-47
UniRef100_Q9FPP4 Photosystem II 22 kDa protein, chloroplastic n=...   191   3e-47
UniRef100_B3RFS0 Chloroplast chlorophyll a/b-binding protein (Fr...   190   5e-47
UniRef100_P54773 Photosystem II 22 kDa protein, chloroplastic n=...   189   1e-46
UniRef100_Q9SMB4 Photosystem II 22 kDa protein, chloroplastic n=...   187   4e-46
UniRef100_Q2LAH0 Chloroplast photosystem II 22 kDa component n=1...   186   5e-46
UniRef100_Q1EMP1 Photosystem II, 22 kDa Protein n=1 Tax=Plantago...   186   5e-46
UniRef100_C6SX13 Putative uncharacterized protein n=1 Tax=Glycin...   182   8e-45
UniRef100_Q3ECX1 Putative uncharacterized protein At1g44575.2 n=...   181   2e-44
UniRef100_Q9XF91 Photosystem II 22 kDa protein, chloroplastic n=...   181   2e-44
UniRef100_Q94EI1 At1g44575/T18F15 n=1 Tax=Arabidopsis thaliana R...   179   8e-44
UniRef100_C5XR87 Putative uncharacterized protein Sb03g041100 n=...   174   2e-42
UniRef100_A9NYQ2 Putative uncharacterized protein n=1 Tax=Picea ...   172   1e-41
UniRef100_B6TKD1 Photosystem II 22 kDa protein n=1 Tax=Zea mays ...   171   2e-41
UniRef100_A9NK12 Putative uncharacterized protein n=1 Tax=Picea ...   169   1e-40
UniRef100_Q6WFB1 Photosystem II subunit PsbS n=1 Tax=Zea mays Re...   167   3e-40
UniRef100_Q943K1 Os01g0869800 protein n=2 Tax=Oryza sativa RepID...   162   8e-39
UniRef100_Q40716 22 kDa protein of photosystem II n=1 Tax=Oryza ...   156   6e-37
UniRef100_Q0J8R9 Os04g0690800 protein n=2 Tax=Oryza sativa Japon...   156   6e-37
UniRef100_Q259V3 B0518A01.1 protein n=2 Tax=Oryza sativa RepID=Q...   156   6e-37
UniRef100_A9TJ15 Photosystem II 22kDa chloroplast protein n=1 Ta...   153   6e-36
UniRef100_Q2VL34 PSII subunit PsbS (Fragment) n=1 Tax=Xerophyta ...   106   9e-22
UniRef100_A4QPL3 Chloroplast photosystem II 22 kDa PsbS protein ...    94   5e-18
UniRef100_A4QPL4 Chloroplast photosystem II 22 kDa PsbS protein ...    92   2e-17
UniRef100_Q1KTI0 Chloroplast PSII associated light-harvesting co...    86   1e-15
UniRef100_A8HPM5 Chloroplast photosystem II-associated 22 kDa pr...    84   5e-15
UniRef100_A8HPM2 Chloroplast photosystem II-associated 22 kDa pr...    84   5e-15
UniRef100_A9NQD1 Putative uncharacterized protein n=1 Tax=Picea ...    75   3e-12
UniRef100_Q56ZF6 Photosystem II chlorophyll-binding protein PsbS...    61   4e-08
UniRef100_C1FFP3 Photosystem II 22 kDa protein, chloroplast n=1 ...    60   7e-08
UniRef100_C1MXA4 Predicted protein n=1 Tax=Micromonas pusilla CC...    57   8e-07
UniRef100_A9S263 Predicted protein n=1 Tax=Physcomitrella patens...    55   3e-06
graphical overview:
alignment
UniRef100_B7FJ53 UniRef100_B7FJ53 UniRef100_B7FJ53 UniRef100_B7FJ53 UniRef100_C6TK51 UniRef100_C6TK51 UniRef100_C6TK51 UniRef100_C6TK51 UniRef100_C6TD06 UniRef100_C6TD06 UniRef100_C6TD06 UniRef100_C6TD06 UniRef100_B9RJ42 UniRef100_B9RJ42 UniRef100_B9RJ42 UniRef100_B9RJ42 UniRef100_A9PIG1 UniRef100_A9PIG1 UniRef100_A9PIG1 UniRef100_A9PIG1 UniRef100_B2ZAP6 UniRef100_B2ZAP6 UniRef100_B2ZAP6 UniRef100_B2ZAP6 UniRef100_A7NVD7 UniRef100_A7NVD7 UniRef100_A7NVD7 UniRef100_A7NVD7 UniRef100_A4L9I5 UniRef100_A4L9I5 UniRef100_A4L9I5 UniRef100_A4L9I5 UniRef100_A4L9G7 UniRef100_A4L9G7 UniRef100_A4L9G7 UniRef100_A4L9G7 UniRef100_Q02060 UniRef100_Q02060 UniRef100_Q02060 UniRef100_Q02060 UniRef100_Q2LAH1 UniRef100_Q2LAH1 UniRef100_Q2LAH1 UniRef100_Q2LAH1 UniRef100_Q9FPP4 UniRef100_Q9FPP4 UniRef100_Q9FPP4 UniRef100_Q9FPP4 UniRef100_B3RFS0 UniRef100_B3RFS0 UniRef100_B3RFS0 UniRef100_B3RFS0 UniRef100_P54773 UniRef100_P54773 UniRef100_P54773 UniRef100_P54773 UniRef100_Q9SMB4 UniRef100_Q9SMB4 UniRef100_Q9SMB4 UniRef100_Q9SMB4 UniRef100_Q2LAH0 UniRef100_Q2LAH0 UniRef100_Q2LAH0 UniRef100_Q2LAH0 UniRef100_Q1EMP1 UniRef100_Q1EMP1 UniRef100_Q1EMP1 UniRef100_Q1EMP1 UniRef100_C6SX13 UniRef100_C6SX13 UniRef100_Q3ECX1 UniRef100_Q3ECX1 UniRef100_Q9XF91 UniRef100_Q9XF91 UniRef100_Q9XF91 UniRef100_Q9XF91 UniRef100_Q94EI1 UniRef100_Q94EI1 UniRef100_Q94EI1 UniRef100_Q94EI1 UniRef100_C5XR87 UniRef100_C5XR87 UniRef100_C5XR87 UniRef100_C5XR87 UniRef100_A9NYQ2 UniRef100_A9NYQ2 UniRef100_A9NYQ2 UniRef100_A9NYQ2 UniRef100_B6TKD1 UniRef100_B6TKD1 UniRef100_B6TKD1 UniRef100_B6TKD1 UniRef100_A9NK12 UniRef100_A9NK12 UniRef100_A9NK12 UniRef100_A9NK12 UniRef100_Q6WFB1 UniRef100_Q6WFB1 UniRef100_Q6WFB1 UniRef100_Q6WFB1 UniRef100_Q943K1 UniRef100_Q943K1 UniRef100_Q943K1 UniRef100_Q943K1 UniRef100_Q40716 UniRef100_Q40716 UniRef100_Q40716 UniRef100_Q40716 UniRef100_Q0J8R9 UniRef100_Q0J8R9 UniRef100_Q0J8R9 UniRef100_Q0J8R9 UniRef100_Q259V3 UniRef100_Q259V3 UniRef100_Q259V3 UniRef100_Q259V3 UniRef100_A9TJ15 UniRef100_A9TJ15 UniRef100_A9TJ15 UniRef100_A9TJ15 UniRef100_Q2VL34 UniRef100_Q2VL34 UniRef100_Q2VL34 UniRef100_Q2VL34 UniRef100_A4QPL3 UniRef100_A4QPL3 UniRef100_A4QPL3 UniRef100_A4QPL3 UniRef100_A4QPL4 UniRef100_A4QPL4 UniRef100_A4QPL4 UniRef100_A4QPL4 UniRef100_Q1KTI0 UniRef100_Q1KTI0 UniRef100_A8HPM5 UniRef100_A8HPM5 UniRef100_A8HPM5 UniRef100_A8HPM5 UniRef100_A8HPM2 UniRef100_A8HPM2 UniRef100_A8HPM2 UniRef100_A8HPM2 UniRef100_A9NQD1 UniRef100_A9NQD1 UniRef100_Q56ZF6 UniRef100_Q56ZF6 UniRef100_C1FFP3 UniRef100_C1FFP3 UniRef100_C1MXA4 UniRef100_C1MXA4