AV642396 ( HCL051b04_r )

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BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV642396  HCL051b04_r
         (490 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_A8I003 Ycf32-related subunit of photosystem II n=1 Tax...   268   1e-70
UniRef100_A8JKA1 Ycf32-related polyprotein of photosystem II (Fr...   183   4e-45
UniRef100_C1MZ88 Photosystem II PsbY protein n=1 Tax=Micromonas ...    68   3e-10
UniRef100_C1E7Y4 Photosystem II PsbY protein n=1 Tax=Micromonas ...    64   4e-09
UniRef100_A9U315 Predicted protein (Fragment) n=1 Tax=Physcomitr...    64   7e-09
UniRef100_Q00Y99 Manganese-binding protein PsbY, photosystem II-...    60   1e-07
UniRef100_A9SPH7 PsbY photosystem II polypeptide n=1 Tax=Physcom...    59   2e-07
UniRef100_B6SQV2 Photosystem II core complex proteins psbY n=1 T...    57   5e-07
UniRef100_B6SUJ7 Photosystem II core complex proteins psbY n=1 T...    57   6e-07
UniRef100_A4S5C8 Possible psbY, PSII-Y, photosystem II polypepti...    55   2e-06
graphical overview:
alignment
UniRef100_A8I003 UniRef100_A8I003 UniRef100_A8I003 UniRef100_A8I003 UniRef100_A8I003 UniRef100_A8I003 UniRef100_A8JKA1 UniRef100_A8JKA1 UniRef100_A8JKA1 UniRef100_A8JKA1 UniRef100_A8JKA1 UniRef100_A8JKA1 UniRef100_A8JKA1 UniRef100_A8JKA1 UniRef100_A8JKA1 UniRef100_A8JKA1 UniRef100_C1MZ88 UniRef100_C1MZ88 UniRef100_C1MZ88 UniRef100_C1MZ88 UniRef100_C1E7Y4 UniRef100_C1E7Y4 UniRef100_A9U315 UniRef100_A9U315 UniRef100_Q00Y99 UniRef100_Q00Y99 UniRef100_A9SPH7 UniRef100_A9SPH7 UniRef100_A9SPH7 UniRef100_A9SPH7 UniRef100_A9SPH7 UniRef100_A9SPH7 UniRef100_B6SQV2 UniRef100_B6SQV2 UniRef100_B6SUJ7 UniRef100_B6SUJ7