AV639940 ( HCL007f03_r )

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BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV639940  HCL007f03_r
         (479 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_Q6Y683 41 kDa ribosome-associated protein n=1 Tax=Chla...   306   4e-82
UniRef100_A8IIK4 Chloroplast stem-loop-binding protein n=1 Tax=C...   306   4e-82
UniRef100_A1YQX4 Chloroplast ribosome-associated protein (Fragme...   255   9e-67
UniRef100_A5AWW0 Chromosome chr7 scaffold_31, whole genome shotg...   113   8e-24
UniRef100_Q8GTK8 Os07g0212200 protein n=2 Tax=Oryza sativa RepID...   111   2e-23
UniRef100_Q9LYA9 Uncharacterized protein At3g63140, chloroplasti...   110   6e-23
UniRef100_C5XDB8 Putative uncharacterized protein Sb02g006430 n=...   109   1e-22
UniRef100_C6TMG5 Putative uncharacterized protein n=1 Tax=Glycin...   107   5e-22
UniRef100_B9GSN8 Predicted protein n=1 Tax=Populus trichocarpa R...   107   5e-22
UniRef100_B9S425 NAD dependent epimerase/dehydratase, putative n...   104   3e-21
UniRef100_B9H883 Predicted protein (Fragment) n=1 Tax=Populus tr...   104   3e-21
UniRef100_C1E7G0 Predicted protein n=1 Tax=Micromonas sp. RCC299...   103   5e-21
UniRef100_C6TM93 Putative uncharacterized protein n=1 Tax=Glycin...   102   1e-20
UniRef100_Q9XEJ6 MRNA binding protein n=1 Tax=Solanum lycopersic...   102   1e-20
UniRef100_O24365 Chloroplast mRNA-binding protein CSP41 (Fragmen...   101   2e-20
UniRef100_Q7X998 MRNA-binding protein (Fragment) n=1 Tax=Nicotia...   100   4e-20
UniRef100_B8LL40 Putative uncharacterized protein n=1 Tax=Picea ...    98   3e-19
UniRef100_Q00VC0 PREDICTED OJ1664_D08.105 gene product (ISS) n=1...    98   3e-19
UniRef100_A9S841 Predicted protein n=1 Tax=Physcomitrella patens...    97   7e-19
UniRef100_C1N8M5 Predicted protein n=1 Tax=Micromonas pusilla CC...    94   6e-18
UniRef100_A4S772 Predicted protein (Fragment) n=1 Tax=Ostreococc...    92   1e-17
UniRef100_Q7X9A4 MRNA binding protein (Fragment) n=1 Tax=Bigelow...    79   1e-13
UniRef100_B1X1U7 mRNA-binding protein n=1 Tax=Cyanothece sp. ATC...    78   3e-13
UniRef100_B7JYW1 NAD-dependent epimerase/dehydratase n=1 Tax=Cya...    75   2e-12
UniRef100_C7QWY4 NAD-dependent epimerase/dehydratase n=1 Tax=Cya...    75   2e-12
UniRef100_Q4C4M7 Similar to Nucleoside-diphosphate-sugar epimera...    75   2e-12
UniRef100_B4WSF7 3-beta hydroxysteroid dehydrogenase/isomerase f...    75   3e-12
UniRef100_B2J138 NAD-dependent epimerase/dehydratase n=1 Tax=Nos...    71   3e-11
UniRef100_B1XPP1 NAD dependent epimerase/dehydratase family prot...    71   3e-11
UniRef100_B4VU46 3-beta hydroxysteroid dehydrogenase/isomerase f...    71   3e-11
UniRef100_A0YPS6 3-beta hydroxysteroid dehydrogenase/isomerase n...    71   3e-11
UniRef100_B0JUM2 NAD-dependent epimerase/dehydratase n=1 Tax=Mic...    69   1e-10
UniRef100_B4B0A9 NAD-dependent epimerase/dehydratase n=1 Tax=Cya...    69   1e-10
UniRef100_Q10VX2 NAD-dependent epimerase/dehydratase n=1 Tax=Tri...    69   2e-10
UniRef100_B7K7X4 NAD-dependent epimerase/dehydratase n=1 Tax=Cya...    69   2e-10
UniRef100_B5VWM5 NAD-dependent epimerase/dehydratase n=1 Tax=Art...    69   2e-10
UniRef100_A8YEV5 Genome sequencing data, contig C301 n=1 Tax=Mic...    69   2e-10
UniRef100_Q8YMU6 mRNA-binding protein n=1 Tax=Nostoc sp. PCC 712...    67   8e-10
UniRef100_Q3MBB3 3-beta hydroxysteroid dehydrogenase/isomerase n...    67   8e-10
UniRef100_A0ZJQ4 3-beta hydroxysteroid dehydrogenase/isomerase n...    65   3e-09
UniRef100_P73424 Slr1540 protein n=1 Tax=Synechocystis sp. PCC 6...    64   5e-09
UniRef100_B0C8B1 NAD-dependent epimerase/dehydratase family prot...    63   1e-08
UniRef100_Q2QSR7 Os12g0420200 protein n=1 Tax=Oryza sativa Japon...    62   3e-08
UniRef100_B8BPB7 Putative uncharacterized protein n=1 Tax=Oryza ...    62   3e-08
UniRef100_A9PJN1 Putative uncharacterized protein n=1 Tax=Populu...    61   3e-08
UniRef100_Q6Y682 38 kDa ribosome-associated protein n=1 Tax=Chla...    61   4e-08
UniRef100_C5YTC0 Putative uncharacterized protein Sb08g005500 n=...    60   8e-08
UniRef100_A5AIE0 Chromosome chr14 scaffold_27, whole genome shot...    60   8e-08
UniRef100_Q31M63 mRNA-binding protein n=2 Tax=Synechococcus elon...    60   1e-07
UniRef100_Q8GJL7 Putative uncharacterized protein SEM0023 n=1 Ta...    60   1e-07
UniRef100_B9RFM2 NAD dependent epimerase/dehydratase, putative n...    60   1e-07
UniRef100_B9I6P3 Predicted protein n=1 Tax=Populus trichocarpa R...    59   1e-07
UniRef100_B4FEH8 Putative uncharacterized protein n=1 Tax=Zea ma...    59   1e-07
UniRef100_A9PGZ8 Putative uncharacterized protein n=1 Tax=Populu...    59   1e-07
UniRef100_Q9SA52 Uncharacterized protein At1g09340, chloroplasti...    59   2e-07
UniRef100_A9SEW4 Predicted protein n=1 Tax=Physcomitrella patens...    59   2e-07
UniRef100_A9NUI9 Putative uncharacterized protein n=1 Tax=Picea ...    59   2e-07
UniRef100_Q2IA52 Chloroplast mRNA binding protein csp41 n=1 Tax=...    57   8e-07
UniRef100_C6TM80 Putative uncharacterized protein n=1 Tax=Glycin...    56   1e-06
graphical overview:
alignment
UniRef100_Q6Y683 UniRef100_Q6Y683 UniRef100_A8IIK4 UniRef100_A8IIK4 UniRef100_A1YQX4 UniRef100_A1YQX4 UniRef100_A5AWW0 UniRef100_A5AWW0 UniRef100_Q8GTK8 UniRef100_Q8GTK8 UniRef100_Q9LYA9 UniRef100_Q9LYA9 UniRef100_C5XDB8 UniRef100_C5XDB8 UniRef100_C6TMG5 UniRef100_C6TMG5 UniRef100_B9GSN8 UniRef100_B9GSN8 UniRef100_B9S425 UniRef100_B9S425 UniRef100_B9H883 UniRef100_B9H883 UniRef100_C1E7G0 UniRef100_C1E7G0 UniRef100_C6TM93 UniRef100_C6TM93 UniRef100_Q9XEJ6 UniRef100_Q9XEJ6 UniRef100_O24365 UniRef100_O24365 UniRef100_Q7X998 UniRef100_Q7X998 UniRef100_B8LL40 UniRef100_B8LL40 UniRef100_Q00VC0 UniRef100_Q00VC0 UniRef100_A9S841 UniRef100_A9S841 UniRef100_C1N8M5 UniRef100_C1N8M5 UniRef100_A4S772 UniRef100_A4S772 UniRef100_Q7X9A4 UniRef100_Q7X9A4 UniRef100_B1X1U7 UniRef100_B1X1U7 UniRef100_B7JYW1 UniRef100_B7JYW1 UniRef100_C7QWY4 UniRef100_C7QWY4 UniRef100_Q4C4M7 UniRef100_Q4C4M7 UniRef100_B4WSF7 UniRef100_B4WSF7 UniRef100_B2J138 UniRef100_B2J138 UniRef100_B1XPP1 UniRef100_B1XPP1 UniRef100_B4VU46 UniRef100_B4VU46 UniRef100_A0YPS6 UniRef100_A0YPS6 UniRef100_B0JUM2 UniRef100_B0JUM2 UniRef100_B4B0A9 UniRef100_B4B0A9 UniRef100_Q10VX2 UniRef100_Q10VX2 UniRef100_B7K7X4 UniRef100_B7K7X4 UniRef100_B5VWM5 UniRef100_B5VWM5 UniRef100_A8YEV5 UniRef100_A8YEV5 UniRef100_Q8YMU6 UniRef100_Q8YMU6 UniRef100_Q3MBB3 UniRef100_Q3MBB3 UniRef100_A0ZJQ4 UniRef100_A0ZJQ4 UniRef100_P73424 UniRef100_P73424 UniRef100_B0C8B1 UniRef100_B0C8B1 UniRef100_Q2QSR7 UniRef100_Q2QSR7 UniRef100_B8BPB7 UniRef100_B8BPB7 UniRef100_A9PJN1 UniRef100_A9PJN1 UniRef100_Q6Y682 UniRef100_Q6Y682 UniRef100_C5YTC0 UniRef100_C5YTC0 UniRef100_A5AIE0 UniRef100_A5AIE0 UniRef100_Q31M63 UniRef100_Q31M63 UniRef100_Q8GJL7 UniRef100_Q8GJL7 UniRef100_B9RFM2 UniRef100_B9RFM2 UniRef100_B9I6P3 UniRef100_B9I6P3 UniRef100_B4FEH8 UniRef100_B4FEH8 UniRef100_A9PGZ8 UniRef100_A9PGZ8 UniRef100_Q9SA52 UniRef100_Q9SA52 UniRef100_A9SEW4 UniRef100_A9SEW4 UniRef100_A9NUI9 UniRef100_A9NUI9 UniRef100_Q2IA52 UniRef100_Q2IA52