AV638187 ( HC083a06_r )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV638187  HC083a06_r
         (296 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_Q75VY9 Light-harvesting chlorophyll-a/b protein of pho...   186   9e-46
UniRef100_A8JF10 Light-harvesting chlorophyll-a/b protein of pho...   186   9e-46
UniRef100_A2SY38 Light-harvesting chlorophyll-a/b binding protei...   161   2e-38
UniRef100_C1E2V4 Chlorophyll a/b-binding protein, psi-associated...   102   2e-20
UniRef100_C1K004 Photosystem I light-harvesting cholrophyll-a/b ...    99   1e-19
UniRef100_C1N986 Chlorophyll a/b-binding protein, psi-associated...    87   6e-16
UniRef100_B6SUC4 Chlorophyll a-b binding protein 8 n=1 Tax=Zea m...    85   3e-15
UniRef100_A9PK62 Putative uncharacterized protein n=1 Tax=Populu...    85   3e-15
UniRef100_A9PE75 Light-harvesting complex I protein Lhca3 n=1 Ta...    85   3e-15
UniRef100_Q6H746 Os02g0197600 protein n=1 Tax=Oryza sativa Japon...    84   4e-15
UniRef100_Q6H748 Putative uncharacterized protein n=2 Tax=Oryza ...    84   4e-15
UniRef100_Q9S8U3 Photosystem I light-harvesting complex chloroph...    83   1e-14
UniRef100_Q43381 PSI type III chlorophyll a/b-binding protein n=...    83   1e-14
UniRef100_A4S9V8 Photosystem I light harvesting complex, chlorop...    82   1e-14
UniRef100_Q9SY97 PSI type III chlorophyll a/b-binding protein n=...    82   2e-14
UniRef100_Q8LCR7 PSI type III chlorophyll a/b-binding protein, p...    82   2e-14
UniRef100_Q0WR83 PSI type III chlorophyll a/b-binding protein n=...    82   2e-14
UniRef100_A0FHB6 Type III chlorophyll a/b-binding protein n=1 Ta...    81   3e-14
UniRef100_A0FHB5 Type III chlorophyll a/b-binding protein n=1 Ta...    81   3e-14
UniRef100_Q3B9U5 Chloroplast light-harvesting complex I protein ...    81   4e-14
UniRef100_A9NZR0 Putative uncharacterized protein n=1 Tax=Picea ...    81   4e-14
UniRef100_B9SEZ7 Chlorophyll A/B binding protein, putative n=1 T...    80   5e-14
UniRef100_C6TLW5 Putative uncharacterized protein n=1 Tax=Glycin...    80   7e-14
UniRef100_A7PSQ5 Chromosome chr6 scaffold_28, whole genome shotg...    80   7e-14
UniRef100_A4QPN5 Chloroplast light-harvesting complex I protein ...    80   7e-14
UniRef100_P27522 Chlorophyll a-b binding protein 8, chloroplasti...    80   7e-14
UniRef100_C6TEX2 Putative uncharacterized protein n=1 Tax=Glycin...    80   9e-14
UniRef100_Q02071 Type III chlorophyll a /b-binding protein n=1 T...    78   3e-13
UniRef100_Q32904 Chlorophyll a-b binding protein 3, chloroplasti...    78   4e-13
UniRef100_A9U226 Predicted protein (Fragment) n=1 Tax=Physcomitr...    77   8e-13
UniRef100_A9TEM8 Predicted protein n=1 Tax=Physcomitrella patens...    77   8e-13
UniRef100_A9TEM7 Predicted protein (Fragment) n=1 Tax=Physcomitr...    77   8e-13
UniRef100_A9TB65 Predicted protein (Fragment) n=1 Tax=Physcomitr...    77   8e-13
UniRef100_A4QPK1 Chloroplast light-harvesting complex I protein ...    77   8e-13
UniRef100_A2SY14 Light-harvesting chlorophyll-a/b binding protei...    75   2e-12
UniRef100_A8I0C6 Regulatory chlorophyll a/b binding protein (Fra...    64   5e-09
UniRef100_B5KV22 Chloroplast PSI type III chlorophyll a/b-bindin...    62   2e-08
UniRef100_Q2V2R9 Uncharacterized protein At1g61520.2 n=1 Tax=Ara...    62   3e-08
UniRef100_B5KV37 Chloroplast PSI type III chlorophyll a/b-bindin...    62   3e-08
UniRef100_Q9M538 Chlorophyll a/b-binding protein type III (Fragm...    58   3e-07
graphical overview:
alignment
UniRef100_Q75VY9 UniRef100_Q75VY9 UniRef100_A8JF10 UniRef100_A8JF10 UniRef100_A2SY38 UniRef100_A2SY38 UniRef100_C1E2V4 UniRef100_C1E2V4 UniRef100_C1K004 UniRef100_C1K004 UniRef100_C1N986 UniRef100_C1N986 UniRef100_B6SUC4 UniRef100_B6SUC4 UniRef100_A9PK62 UniRef100_A9PK62 UniRef100_A9PE75 UniRef100_A9PE75 UniRef100_Q6H746 UniRef100_Q6H746 UniRef100_Q6H748 UniRef100_Q6H748 UniRef100_Q9S8U3 UniRef100_Q9S8U3 UniRef100_Q43381 UniRef100_Q43381 UniRef100_A4S9V8 UniRef100_A4S9V8 UniRef100_Q9SY97 UniRef100_Q9SY97 UniRef100_Q8LCR7 UniRef100_Q8LCR7 UniRef100_Q0WR83 UniRef100_Q0WR83 UniRef100_A0FHB6 UniRef100_A0FHB6 UniRef100_A0FHB5 UniRef100_A0FHB5 UniRef100_Q3B9U5 UniRef100_Q3B9U5 UniRef100_A9NZR0 UniRef100_A9NZR0 UniRef100_B9SEZ7 UniRef100_B9SEZ7 UniRef100_C6TLW5 UniRef100_C6TLW5 UniRef100_A7PSQ5 UniRef100_A7PSQ5 UniRef100_A4QPN5 UniRef100_A4QPN5 UniRef100_P27522 UniRef100_P27522 UniRef100_C6TEX2 UniRef100_C6TEX2 UniRef100_Q02071 UniRef100_Q02071 UniRef100_Q32904 UniRef100_Q32904 UniRef100_A9U226 UniRef100_A9U226 UniRef100_A9TEM8 UniRef100_A9TEM8 UniRef100_A9TEM7 UniRef100_A9TEM7 UniRef100_A9TB65 UniRef100_A9TB65 UniRef100_A4QPK1 UniRef100_A4QPK1 UniRef100_A2SY14 UniRef100_A2SY14 UniRef100_A8I0C6 UniRef100_A8I0C6 UniRef100_B5KV22 UniRef100_B5KV22 UniRef100_Q2V2R9 UniRef100_Q2V2R9 UniRef100_B5KV37 UniRef100_B5KV37