AV629727 ( LCL064f10_r )

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BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV629727  LCL064f10_r
         (265 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_A8IRZ2 DNA-directed RNA polymerase n=1 Tax=Chlamydomon...   182   1e-44
UniRef100_Q8MX26 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    71   4e-11
UniRef100_A9U396 DNA-directed RNA polymerase n=1 Tax=Physcomitre...    65   2e-09
UniRef100_C9SR21 DNA-directed RNA polymerase II subunit RPB1 n=1...    63   9e-09
UniRef100_Q71ET5 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    62   2e-08
UniRef100_UPI0000E12351 Os05g0151000 n=1 Tax=Oryza sativa Japoni...    61   3e-08
UniRef100_Q5WMZ9 DNA-directed RNA polymerase n=1 Tax=Oryza sativ...    61   3e-08
UniRef100_Q0DKN9 DNA-directed RNA polymerase n=1 Tax=Oryza sativ...    61   3e-08
UniRef100_A4RMP1 DNA-directed RNA polymerase n=1 Tax=Magnaporthe...    60   6e-08
UniRef100_Q9AXN0 DNA-directed RNA polymerase n=1 Tax=Glaucosphae...    60   1e-07
UniRef100_Q2PYS6 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    60   1e-07
UniRef100_Q2PYR5 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    60   1e-07
UniRef100_Q1ACT9 RNA polymerase II largest subunit (Fragment) n=...    59   1e-07
UniRef100_O04144 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    59   1e-07
UniRef100_Q1ACS9 RNA polymerase II largest subunit (Fragment) n=...    59   2e-07
UniRef100_Q71ET3 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    59   2e-07
UniRef100_Q2TUN8 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    59   2e-07
UniRef100_Q1ACU5 RNA polymerase II largest subunit (Fragment) n=...    59   2e-07
UniRef100_B8BQ02 DNA-directed RNA polymerase n=1 Tax=Thalassiosi...    58   3e-07
UniRef100_B7SNX5 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    58   3e-07
UniRef100_B7SNX2 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    58   3e-07
UniRef100_Q2PYP9 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    58   3e-07
UniRef100_A1YIC6 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    58   3e-07
UniRef100_Q71ET4 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    58   4e-07
UniRef100_Q1ACT4 RNA polymerase II largest subunit (Fragment) n=...    58   4e-07
UniRef100_B7SNW8 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    58   4e-07
UniRef100_Q6CBQ3 DNA-directed RNA polymerase n=1 Tax=Yarrowia li...    58   4e-07
UniRef100_Q2PYR1 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    58   4e-07
UniRef100_Q1L5Z5 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    57   5e-07
UniRef100_Q1ACU8 RNA polymerase II largest subunit (Fragment) n=...    57   5e-07
UniRef100_Q1ACT5 RNA polymerase II largest subunit (Fragment) n=...    57   5e-07
UniRef100_Q1ACT2 RNA polymerase II largest subunit (Fragment) n=...    57   5e-07
UniRef100_Q1ACS3 RNA polymerase II largest subunit (Fragment) n=...    57   5e-07
UniRef100_A7R1R2 DNA-directed RNA polymerase n=1 Tax=Vitis vinif...    57   5e-07
UniRef100_Q7SDN0 DNA-directed RNA polymerase n=1 Tax=Neurospora ...    57   5e-07
UniRef100_P35084 DNA-directed RNA polymerase II subunit rpb1 n=1...    57   5e-07
UniRef100_P18616 DNA-directed RNA polymerase II subunit RPB1 n=1...    57   5e-07
UniRef100_Q99368 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    57   6e-07
UniRef100_Q1ACV0 RNA polymerase II largest subunit (Fragment) n=...    57   6e-07
UniRef100_Q1ACU4 RNA polymerase II largest subunit (Fragment) n=...    57   6e-07
UniRef100_Q1ACT1 RNA polymerase II largest subunit (Fragment) n=...    57   6e-07
UniRef100_Q1ACV3 RNA polymerase II largest subunit (Fragment) n=...    57   8e-07
UniRef100_Q71EU1 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    56   1e-06
UniRef100_Q2TUN9 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    56   1e-06
UniRef100_Q1ACU7 RNA polymerase II largest subunit (Fragment) n=...    56   1e-06
UniRef100_Q1ACT3 RNA polymerase II largest subunit (Fragment) n=...    56   1e-06
UniRef100_B7SNW5 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    56   1e-06
UniRef100_Q71EU0 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    56   1e-06
UniRef100_Q71ET9 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    56   1e-06
UniRef100_Q1ACS5 RNA polymerase II largest subunit (Fragment) n=...    56   1e-06
UniRef100_Q2PYS1 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    56   1e-06
UniRef100_A7J5B1 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    56   1e-06
UniRef100_A7J588 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    56   1e-06
UniRef100_Q1ACU9 RNA polymerase II largest subunit (Fragment) n=...    55   2e-06
UniRef100_B7SNX4 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    55   2e-06
UniRef100_B9PMD7 DNA-directed RNA polymerase n=2 Tax=Toxoplasma ...    55   2e-06
UniRef100_B6KEC6 DNA-directed RNA polymerase n=1 Tax=Toxoplasma ...    55   2e-06
UniRef100_B2AA31 DNA-directed RNA polymerase n=1 Tax=Podospora a...    55   2e-06
UniRef100_P36594 DNA-directed RNA polymerase II subunit rpb1 n=1...    55   2e-06
UniRef100_Q71ET8 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    55   2e-06
UniRef100_Q71ET7 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    55   2e-06
UniRef100_Q2TUN7 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    55   2e-06
UniRef100_Q1ACV2 RNA polymerase II largest subunit (Fragment) n=...    55   2e-06
UniRef100_Q1ACU1 RNA polymerase II largest subunit (Fragment) n=...    55   2e-06
UniRef100_B9FZ51 DNA-directed RNA polymerase n=1 Tax=Oryza sativ...    55   2e-06
UniRef100_B8BAW1 DNA-directed RNA polymerase n=1 Tax=Oryza sativ...    55   2e-06
UniRef100_A7J592 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    55   2e-06
UniRef100_A5H2F1 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    55   2e-06
UniRef100_Q71ET6 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    55   3e-06
UniRef100_Q2TUN6 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    55   3e-06
UniRef100_B7SNX0 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    55   3e-06
UniRef100_B7SNW7 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    55   3e-06
UniRef100_B7SNW6 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    55   3e-06
UniRef100_A1YIA8 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    55   3e-06
UniRef100_Q1ACT8 RNA polymerase II largest subunit (Fragment) n=...    54   4e-06
UniRef100_Q1ACS7 RNA polymerase II largest subunit (Fragment) n=...    54   4e-06
UniRef100_C5YGY9 DNA-directed RNA polymerase n=1 Tax=Sorghum bic...    54   4e-06
UniRef100_Q2PYS8 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    54   4e-06
UniRef100_A1YIC0 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    54   4e-06
UniRef100_A1YIB5 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    54   4e-06
UniRef100_Q1ACU6 RNA polymerase II largest subunit (Fragment) n=...    54   5e-06
UniRef100_Q1ACU3 RNA polymerase II largest subunit (Fragment) n=...    54   5e-06
UniRef100_Q1ACU2 RNA polymerase II largest subunit (Fragment) n=...    54   5e-06
UniRef100_B6JYP8 DNA-directed RNA polymerase n=1 Tax=Schizosacch...    54   5e-06
UniRef100_A5E6J4 DNA-directed RNA polymerase n=1 Tax=Lodderomyce...    54   5e-06
UniRef100_UPI0001985649 PREDICTED: similar to NRPB1 (RNA POLYMER...    54   7e-06
UniRef100_Q1ACV1 RNA polymerase II largest subunit (Fragment) n=...    54   7e-06
UniRef100_Q1ACT0 RNA polymerase II largest subunit (Fragment) n=...    54   7e-06
UniRef100_Q1ACS4 RNA polymerase II largest subunit (Fragment) n=...    54   7e-06
UniRef100_A7NVN7 DNA-directed RNA polymerase n=1 Tax=Vitis vinif...    54   7e-06
UniRef100_B2W4S0 DNA-directed RNA polymerase n=1 Tax=Pyrenophora...    54   7e-06
UniRef100_A1YIC4 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    54   7e-06
UniRef100_A1YIB6 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    54   7e-06
UniRef100_Q9AXN1 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    53   9e-06
UniRef100_Q1L5Y7 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    53   9e-06
UniRef100_B7SNX1 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    53   9e-06
UniRef100_B7SNW9 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    53   9e-06
UniRef100_B7G9I2 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    53   9e-06
UniRef100_Q2PYQ8 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    53   9e-06
UniRef100_B9WN64 DNA-directed RNA polymerase n=1 Tax=Candida dub...    53   9e-06
UniRef100_A7J591 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    53   9e-06
UniRef100_A1YIC2 DNA-directed RNA polymerase (Fragment) n=1 Tax=...    53   9e-06
graphical overview:
alignment
UniRef100_A8IRZ2 UniRef100_A8IRZ2 UniRef100_Q8MX26 UniRef100_Q8MX26 UniRef100_A9U396 UniRef100_A9U396 UniRef100_C9SR21 UniRef100_C9SR21 UniRef100_Q71ET5 UniRef100_Q71ET5 UniRef100_UPI0000E12351 UniRef100_UPI0000E12351 UniRef100_Q5WMZ9 UniRef100_Q5WMZ9 UniRef100_Q0DKN9 UniRef100_Q0DKN9 UniRef100_A4RMP1 UniRef100_A4RMP1 UniRef100_Q9AXN0 UniRef100_Q9AXN0 UniRef100_Q2PYS6 UniRef100_Q2PYS6 UniRef100_Q2PYR5 UniRef100_Q2PYR5 UniRef100_Q1ACT9 UniRef100_Q1ACT9 UniRef100_O04144 UniRef100_O04144 UniRef100_Q1ACS9 UniRef100_Q1ACS9 UniRef100_Q71ET3 UniRef100_Q71ET3 UniRef100_Q2TUN8 UniRef100_Q2TUN8 UniRef100_Q1ACU5 UniRef100_Q1ACU5 UniRef100_B8BQ02 UniRef100_B8BQ02 UniRef100_B7SNX5 UniRef100_B7SNX5 UniRef100_B7SNX2 UniRef100_B7SNX2 UniRef100_Q2PYP9 UniRef100_Q2PYP9 UniRef100_A1YIC6 UniRef100_A1YIC6 UniRef100_Q71ET4 UniRef100_Q71ET4 UniRef100_Q1ACT4 UniRef100_Q1ACT4 UniRef100_B7SNW8 UniRef100_B7SNW8 UniRef100_Q6CBQ3 UniRef100_Q6CBQ3 UniRef100_Q2PYR1 UniRef100_Q2PYR1 UniRef100_Q1L5Z5 UniRef100_Q1L5Z5 UniRef100_Q1ACU8 UniRef100_Q1ACU8 UniRef100_Q1ACT5 UniRef100_Q1ACT5 UniRef100_Q1ACT2 UniRef100_Q1ACT2 UniRef100_Q1ACS3 UniRef100_Q1ACS3 UniRef100_A7R1R2 UniRef100_A7R1R2 UniRef100_Q7SDN0 UniRef100_Q7SDN0 UniRef100_P35084 UniRef100_P35084 UniRef100_P18616 UniRef100_P18616 UniRef100_Q99368 UniRef100_Q99368 UniRef100_Q1ACV0 UniRef100_Q1ACV0 UniRef100_Q1ACU4 UniRef100_Q1ACU4 UniRef100_Q1ACT1 UniRef100_Q1ACT1 UniRef100_Q1ACV3 UniRef100_Q1ACV3 UniRef100_Q71EU1 UniRef100_Q71EU1 UniRef100_Q2TUN9 UniRef100_Q2TUN9 UniRef100_Q1ACU7 UniRef100_Q1ACU7 UniRef100_Q1ACT3 UniRef100_Q1ACT3 UniRef100_B7SNW5 UniRef100_B7SNW5 UniRef100_Q71EU0 UniRef100_Q71EU0 UniRef100_Q71ET9 UniRef100_Q71ET9 UniRef100_Q1ACS5 UniRef100_Q1ACS5 UniRef100_Q2PYS1 UniRef100_Q2PYS1 UniRef100_A7J5B1 UniRef100_A7J5B1 UniRef100_A7J588 UniRef100_A7J588 UniRef100_Q1ACU9 UniRef100_Q1ACU9 UniRef100_B7SNX4 UniRef100_B7SNX4 UniRef100_B9PMD7 UniRef100_B9PMD7 UniRef100_B6KEC6 UniRef100_B6KEC6 UniRef100_B2AA31 UniRef100_B2AA31 UniRef100_P36594 UniRef100_P36594 UniRef100_Q71ET8 UniRef100_Q71ET8 UniRef100_Q71ET7 UniRef100_Q71ET7 UniRef100_Q2TUN7 UniRef100_Q2TUN7 UniRef100_Q1ACV2 UniRef100_Q1ACV2 UniRef100_Q1ACU1 UniRef100_Q1ACU1 UniRef100_B9FZ51 UniRef100_B9FZ51 UniRef100_B8BAW1 UniRef100_B8BAW1 UniRef100_A7J592 UniRef100_A7J592 UniRef100_A5H2F1 UniRef100_A5H2F1 UniRef100_Q71ET6 UniRef100_Q71ET6 UniRef100_Q2TUN6 UniRef100_Q2TUN6 UniRef100_B7SNX0 UniRef100_B7SNX0 UniRef100_B7SNW7 UniRef100_B7SNW7 UniRef100_B7SNW6 UniRef100_B7SNW6 UniRef100_A1YIA8 UniRef100_A1YIA8 UniRef100_Q1ACT8 UniRef100_Q1ACT8 UniRef100_Q1ACS7 UniRef100_Q1ACS7 UniRef100_C5YGY9 UniRef100_C5YGY9 UniRef100_Q2PYS8 UniRef100_Q2PYS8 UniRef100_A1YIC0 UniRef100_A1YIC0 UniRef100_A1YIB5 UniRef100_A1YIB5 UniRef100_Q1ACU6 UniRef100_Q1ACU6 UniRef100_Q1ACU3 UniRef100_Q1ACU3 UniRef100_Q1ACU2 UniRef100_Q1ACU2 UniRef100_B6JYP8 UniRef100_B6JYP8 UniRef100_A5E6J4 UniRef100_A5E6J4 UniRef100_UPI0001985649 UniRef100_UPI0001985649 UniRef100_Q1ACV1 UniRef100_Q1ACV1 UniRef100_Q1ACT0 UniRef100_Q1ACT0 UniRef100_Q1ACS4 UniRef100_Q1ACS4 UniRef100_A7NVN7 UniRef100_A7NVN7 UniRef100_B2W4S0 UniRef100_B2W4S0 UniRef100_A1YIC4 UniRef100_A1YIC4 UniRef100_A1YIB6 UniRef100_A1YIB6 UniRef100_Q9AXN1 UniRef100_Q9AXN1 UniRef100_Q1L5Y7 UniRef100_Q1L5Y7 UniRef100_B7SNX1 UniRef100_B7SNX1 UniRef100_B7SNW9 UniRef100_B7SNW9 UniRef100_B7G9I2 UniRef100_B7G9I2 UniRef100_Q2PYQ8 UniRef100_Q2PYQ8 UniRef100_B9WN64 UniRef100_B9WN64 UniRef100_A7J591 UniRef100_A7J591