AV623947 ( LC070h01_r )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV623947  LC070h01_r
         (459 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_Q93WD2 Chlorophyll a-b binding protein CP29 n=2 Tax=Ch...   283   5e-75
UniRef100_A2SY49 Light-harvesting chlorophyll-a/b binding protei...   254   2e-66
UniRef100_A4QPJ4 Chloroplast light-harvesting protein CP29 Lhcb4...   161   2e-38
UniRef100_Q7XYQ5 Chlorophyll a/b-binding protein CP29 n=1 Tax=Bi...   127   3e-28
UniRef100_B5A4H8 Chlorophyll a/b binding protein CP29 n=1 Tax=Gy...   122   1e-26
UniRef100_A4S8L5 Possibly CP29, chlorophyll a/b binding n=1 Tax=...   105   2e-21
UniRef100_A9T2F8 Predicted protein n=1 Tax=Physcomitrella patens...   103   5e-21
UniRef100_A9P071 Putative uncharacterized protein n=1 Tax=Picea ...   100   5e-20
UniRef100_A9NYR8 Putative uncharacterized protein n=1 Tax=Picea ...   100   5e-20
UniRef100_A9NKX0 Putative uncharacterized protein n=1 Tax=Picea ...   100   5e-20
UniRef100_B9SLN2 Chlorophyll A/B binding protein, putative n=1 T...    99   1e-19
UniRef100_A9U3M1 Predicted protein n=1 Tax=Physcomitrella patens...    99   1e-19
UniRef100_Q3B9U8 CP29-like light-harvesting chlorophyll a/b bind...    99   2e-19
UniRef100_B1N8L8 Chloroplast chlorophyll a/b-binding protein (Fr...    97   4e-19
UniRef100_Q07473 Chlorophyll a-b binding protein CP29.1, chlorop...    97   4e-19
UniRef100_Q9S7W1 Chlorophyll a-b binding protein CP29.3, chlorop...    97   7e-19
UniRef100_Q9XQB2 Chlorophyll a/b binding protein CP29 n=1 Tax=Vi...    96   1e-18
UniRef100_C1K5D1 Chloroplast chlorophyll A-B binding protein n=1...    96   1e-18
UniRef100_C1N6G9 Chlorophyll a/b-binding protein CP29, chloropla...    96   2e-18
UniRef100_B9SQ36 Chlorophyll A/B binding protein, putative n=1 T...    96   2e-18
UniRef100_B7SB30 LHCB4 n=1 Tax=Bambusa oldhamii RepID=B7SB30_BAMOL     96   2e-18
UniRef100_B7SAW1 Chloroplast chlorophyll a/b binding protein cab...    95   2e-18
UniRef100_B7FIZ5 Putative uncharacterized protein n=1 Tax=Medica...    95   2e-18
UniRef100_A7PP40 Chromosome chr8 scaffold_23, whole genome shotg...    95   2e-18
UniRef100_B9HHN0 Light-harvesting complex II protein Lhcb8 n=1 T...    95   3e-18
UniRef100_O24561 Putative uncharacterized protein n=1 Tax=Zea ma...    94   4e-18
UniRef100_C0HF02 Putative uncharacterized protein n=1 Tax=Zea ma...    94   4e-18
UniRef100_A9PK34 Putative uncharacterized protein n=1 Tax=Populu...    94   4e-18
UniRef100_C5XBI9 Putative uncharacterized protein Sb02g036260 n=...    93   1e-17
UniRef100_B4FJG1 Putative uncharacterized protein n=1 Tax=Zea ma...    92   1e-17
UniRef100_Q6Z411 Os07g0558400 protein n=3 Tax=Oryza sativa RepID...    92   1e-17
UniRef100_Q9XF88-2 Isoform 2 of Chlorophyll a-b binding protein ...    92   2e-17
UniRef100_Q9XF88 Chlorophyll a-b binding protein CP29.2, chlorop...    92   2e-17
UniRef100_B9HCM1 Light-harvesting complex II protein Lhcb4 n=2 T...    91   2e-17
UniRef100_Q0PWS7 Chloroplast pigment-binding protein CP29 n=1 Ta...    92   2e-17
UniRef100_C6TDC5 Putative uncharacterized protein n=1 Tax=Glycin...    91   4e-17
UniRef100_B9IG87 Predicted protein n=1 Tax=Populus trichocarpa R...    90   7e-17
UniRef100_A9PJF0 Putative uncharacterized protein n=1 Tax=Populu...    90   7e-17
UniRef100_C1EHQ9 Chlorophyll a/b-binding protein CP29, chloropla...    87   6e-16
UniRef100_A2SY24 Chloroplast light-harvesting complex protein CP...    87   8e-16
UniRef100_A4QPH7 Chloroplast light-harvesting protein CP29 Lhcb4...    80   9e-14
UniRef100_A9NLZ0 Putative uncharacterized protein n=1 Tax=Picea ...    64   5e-09
UniRef100_C0PHS5 Putative uncharacterized protein n=1 Tax=Zea ma...    61   4e-08
UniRef100_A4QPI5 Chloroplast light-harvesting complex I protein ...    59   1e-07
UniRef100_P13869 Chlorophyll a-b binding protein, chloroplastic ...    59   2e-07
UniRef100_A3BL40 Putative uncharacterized protein n=1 Tax=Oryza ...    57   5e-07
UniRef100_Q41038 Type II chlorophyll a/b binding protein from ph...    57   6e-07
UniRef100_UPI0001982B54 PREDICTED: hypothetical protein n=1 Tax=...    56   1e-06
UniRef100_B9GML1 Light-harvesting complex I protein Lhca2 n=1 Ta...    56   1e-06
UniRef100_A9PGU3 Putative uncharacterized protein n=1 Tax=Populu...    56   1e-06
UniRef100_A4QPI4 Chloroplast light-harvesting complex I protein ...    56   1e-06
UniRef100_Q9IGT7 163R* (Fragment) n=1 Tax=Porcine adenovirus 3 R...    56   1e-06
UniRef100_B6SMV5 Chlorophyll a-b binding protein n=1 Tax=Zea may...    56   1e-06
UniRef100_B4FXB0 Chlorophyll a-b binding protein CP24 n=1 Tax=Ze...    55   2e-06
UniRef100_C5XEJ9 Putative uncharacterized protein Sb03g029150 n=...    55   2e-06
UniRef100_UPI000186B3FA hypothetical protein BRAFLDRAFT_112557 n...    55   3e-06
UniRef100_Q9SYW8 Lhca2 protein n=1 Tax=Arabidopsis thaliana RepI...    55   3e-06
UniRef100_Q9M320 Lhca2 protein n=1 Tax=Arabidopsis thaliana RepI...    55   3e-06
UniRef100_B4YYB1 ST49-6 (Fragment) n=1 Tax=Thellungiella halophi...    55   3e-06
UniRef100_A7QP61 Chromosome chr1 scaffold_136, whole genome shot...    55   3e-06
UniRef100_A4URF4 LhCa2 protein n=1 Tax=Brassica juncea RepID=A4U...    55   3e-06
UniRef100_C6TKB2 Putative uncharacterized protein n=1 Tax=Glycin...    54   4e-06
UniRef100_P10708 Chlorophyll a-b binding protein 7, chloroplasti...    54   4e-06
UniRef100_UPI000198429C PREDICTED: hypothetical protein n=1 Tax=...    54   5e-06
UniRef100_C6TLU9 Putative uncharacterized protein n=1 Tax=Glycin...    54   5e-06
UniRef100_B9RR76 Chlorophyll A/B binding protein, putative n=1 T...    54   5e-06
UniRef100_A7PDT5 Chromosome chr11 scaffold_13, whole genome shot...    54   5e-06
UniRef100_A5BBT6 Putative uncharacterized protein n=1 Tax=Vitis ...    54   5e-06
UniRef100_A5B4F0 Putative uncharacterized protein n=1 Tax=Vitis ...    54   5e-06
UniRef100_A5ASW8 Chromosome chr12 scaffold_238, whole genome sho...    54   5e-06
UniRef100_B9MT12 Light-harvesting complex I protein Lhca6 n=1 Ta...    54   7e-06
UniRef100_B8BPE3 Putative uncharacterized protein n=1 Tax=Oryza ...    54   7e-06
UniRef100_A9TV00 Predicted protein (Fragment) n=1 Tax=Physcomitr...    54   7e-06
UniRef100_A9PJQ2 Putative uncharacterized protein n=1 Tax=Populu...    54   7e-06
UniRef100_A9PGU8 Putative uncharacterized protein n=1 Tax=Populu...    54   7e-06
UniRef100_B9GZP7 Light-harvesting complex I protein Lhca2 n=1 Ta...    53   9e-06
UniRef100_A9TJ06 Predicted protein n=1 Tax=Physcomitrella patens...    53   9e-06
graphical overview:
alignment
UniRef100_Q93WD2 UniRef100_Q93WD2 UniRef100_A2SY49 UniRef100_A2SY49 UniRef100_A4QPJ4 UniRef100_A4QPJ4 UniRef100_Q7XYQ5 UniRef100_Q7XYQ5 UniRef100_B5A4H8 UniRef100_B5A4H8 UniRef100_A4S8L5 UniRef100_A4S8L5 UniRef100_A9T2F8 UniRef100_A9T2F8 UniRef100_A9P071 UniRef100_A9P071 UniRef100_A9NYR8 UniRef100_A9NYR8 UniRef100_A9NKX0 UniRef100_A9NKX0 UniRef100_B9SLN2 UniRef100_B9SLN2 UniRef100_A9U3M1 UniRef100_A9U3M1 UniRef100_Q3B9U8 UniRef100_Q3B9U8 UniRef100_B1N8L8 UniRef100_B1N8L8 UniRef100_Q07473 UniRef100_Q07473 UniRef100_Q9S7W1 UniRef100_Q9S7W1 UniRef100_Q9XQB2 UniRef100_Q9XQB2 UniRef100_C1K5D1 UniRef100_C1K5D1 UniRef100_C1N6G9 UniRef100_C1N6G9 UniRef100_B9SQ36 UniRef100_B9SQ36 UniRef100_B7SB30 UniRef100_B7SB30 UniRef100_B7SAW1 UniRef100_B7SAW1 UniRef100_B7FIZ5 UniRef100_B7FIZ5 UniRef100_A7PP40 UniRef100_A7PP40 UniRef100_B9HHN0 UniRef100_B9HHN0 UniRef100_O24561 UniRef100_O24561 UniRef100_C0HF02 UniRef100_C0HF02 UniRef100_A9PK34 UniRef100_A9PK34 UniRef100_C5XBI9 UniRef100_C5XBI9 UniRef100_B4FJG1 UniRef100_B4FJG1 UniRef100_Q6Z411 UniRef100_Q6Z411 UniRef100_Q9XF88-2 UniRef100_Q9XF88-2 UniRef100_Q9XF88 UniRef100_Q9XF88 UniRef100_B9HCM1 UniRef100_B9HCM1 UniRef100_B9HCM1 UniRef100_B9HCM1 UniRef100_Q0PWS7 UniRef100_Q0PWS7 UniRef100_C6TDC5 UniRef100_C6TDC5 UniRef100_B9IG87 UniRef100_B9IG87 UniRef100_A9PJF0 UniRef100_A9PJF0 UniRef100_C1EHQ9 UniRef100_C1EHQ9 UniRef100_A2SY24 UniRef100_A2SY24 UniRef100_A4QPH7 UniRef100_A4QPH7 UniRef100_A9NLZ0 UniRef100_A9NLZ0 UniRef100_C0PHS5 UniRef100_C0PHS5 UniRef100_A4QPI5 UniRef100_A4QPI5 UniRef100_P13869 UniRef100_P13869 UniRef100_A3BL40 UniRef100_A3BL40 UniRef100_Q41038 UniRef100_Q41038 UniRef100_UPI0001982B54 UniRef100_UPI0001982B54 UniRef100_B9GML1 UniRef100_B9GML1 UniRef100_A9PGU3 UniRef100_A9PGU3 UniRef100_A4QPI4 UniRef100_A4QPI4 UniRef100_Q9IGT7 UniRef100_Q9IGT7 UniRef100_B6SMV5 UniRef100_B6SMV5 UniRef100_B4FXB0 UniRef100_B4FXB0 UniRef100_C5XEJ9 UniRef100_C5XEJ9 UniRef100_UPI000186B3FA UniRef100_UPI000186B3FA UniRef100_Q9SYW8 UniRef100_Q9SYW8 UniRef100_Q9M320 UniRef100_Q9M320 UniRef100_B4YYB1 UniRef100_B4YYB1 UniRef100_A7QP61 UniRef100_A7QP61 UniRef100_A4URF4 UniRef100_A4URF4 UniRef100_C6TKB2 UniRef100_C6TKB2 UniRef100_P10708 UniRef100_P10708 UniRef100_UPI000198429C UniRef100_UPI000198429C UniRef100_C6TLU9 UniRef100_C6TLU9 UniRef100_B9RR76 UniRef100_B9RR76 UniRef100_A7PDT5 UniRef100_A7PDT5 UniRef100_A5BBT6 UniRef100_A5BBT6 UniRef100_A5B4F0 UniRef100_A5B4F0 UniRef100_A5ASW8 UniRef100_A5ASW8 UniRef100_B9MT12 UniRef100_B9MT12 UniRef100_B8BPE3 UniRef100_B8BPE3 UniRef100_A9TV00 UniRef100_A9TV00 UniRef100_A9PJQ2 UniRef100_A9PJQ2 UniRef100_A9PGU8 UniRef100_A9PGU8 UniRef100_B9GZP7 UniRef100_B9GZP7