AV623256 ( LC061b06_r )

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BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV623256  LC061b06_r
         (507 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_A8IJY1 DNA-directed RNA polymerase II, 14.5 kDa polype...   146   7e-34
UniRef100_UPI0001925D37 PREDICTED: similar to predicted protein ...    61   5e-08
UniRef100_Q965S0 DNA-directed RNA polymerase subunit n=1 Tax=Cae...    60   8e-08
UniRef100_A8XD45 DNA-directed RNA polymerase subunit n=1 Tax=Cae...    60   8e-08
UniRef100_UPI000059FF0D PREDICTED: similar to DNA-directed RNA p...    59   1e-07
UniRef100_P36954 DNA-directed RNA polymerase II subunit RPB9 n=4...    59   1e-07
UniRef100_Q4S925 Chromosome undetermined SCAF14702, whole genome...    59   1e-07
UniRef100_Q1LVK2 Novel protein similar to vertebrate polymerase ...    59   1e-07
UniRef100_C1BH34 DNA-directed RNA polymerase II subunit I n=1 Ta...    59   1e-07
UniRef100_C1BGM4 DNA-directed RNA polymerase II subunit I n=1 Ta...    59   1e-07
UniRef100_B5FX75 DNA-directed RNA polymerase subunit n=1 Tax=Tae...    59   1e-07
UniRef100_Q32P73 DNA-directed RNA polymerase II subunit RPB9 n=1...    59   1e-07
UniRef100_UPI000069E0CE DNA-directed RNA polymerase II subunit R...    59   2e-07
UniRef100_Q5EAU6 MGC85139 protein n=1 Tax=Xenopus laevis RepID=Q...    59   2e-07
UniRef100_UPI0000E491D4 PREDICTED: similar to RNA Polymerase II ...    59   2e-07
UniRef100_B7PRG9 DNA-directed RNA polymerase subunit n=1 Tax=Ixo...    58   3e-07
UniRef100_UPI000180CB05 PREDICTED: similar to DNA directed RNA p...    58   4e-07
UniRef100_UPI00015B430F PREDICTED: similar to ENSANGP00000019703...    58   4e-07
UniRef100_Q5XJ93 Zgc:103515 n=1 Tax=Danio rerio RepID=Q5XJ93_DANRE     57   5e-07
UniRef100_C1FE61 Predicted protein n=1 Tax=Micromonas sp. RCC299...    57   5e-07
UniRef100_Q1HRD6 DNA-directed RNA polymerase subunit n=1 Tax=Aed...    57   5e-07
UniRef100_B0W4J8 DNA-directed RNA polymerase subunit n=1 Tax=Cul...    57   5e-07
UniRef100_A7SXH3 Predicted protein n=1 Tax=Nematostella vectensi...    57   5e-07
UniRef100_Q7Q4H0 DNA-directed RNA polymerase subunit (Fragment) ...    57   7e-07
UniRef100_C3XRA2 DNA-directed RNA polymerase subunit n=1 Tax=Bra...    57   7e-07
UniRef100_P36958 DNA-directed RNA polymerase II subunit RPB9 n=6...    57   7e-07
UniRef100_B4NAN1 DNA-directed RNA polymerase subunit n=1 Tax=Dro...    57   7e-07
UniRef100_Q299B2 DNA-directed RNA polymerase subunit n=2 Tax=pse...    57   7e-07
UniRef100_B4MBD3 DNA-directed RNA polymerase subunit n=1 Tax=Dro...    56   1e-06
UniRef100_UPI0000D56411 PREDICTED: similar to GA17176-PA n=1 Tax...    56   2e-06
UniRef100_B3LZX4 DNA-directed RNA polymerase subunit n=1 Tax=Dro...    56   2e-06
UniRef100_B4JS70 DNA-directed RNA polymerase subunit n=1 Tax=Dro...    55   3e-06
UniRef100_UPI00003C0AF7 PREDICTED: similar to RNA polymerase II ...    55   3e-06
UniRef100_C1BNL8 DNA-directed RNA polymerase subunit n=1 Tax=Cal...    55   3e-06
UniRef100_UPI0001791659 PREDICTED: similar to GA17176-PA n=1 Tax...    54   4e-06
UniRef100_C4WT20 DNA-directed RNA polymerase subunit n=1 Tax=Acy...    54   4e-06
UniRef100_C1MJZ9 Predicted protein n=1 Tax=Micromonas pusilla CC...    54   6e-06
UniRef100_A8QDP3 DNA-directed RNA polymerase subunit n=1 Tax=Bru...    54   6e-06
UniRef100_B3RJJ7 Putative uncharacterized protein n=1 Tax=Tricho...    54   8e-06
graphical overview:
alignment
UniRef100_A8IJY1 UniRef100_A8IJY1 UniRef100_UPI0001925D37 UniRef100_UPI0001925D37 UniRef100_Q965S0 UniRef100_Q965S0 UniRef100_A8XD45 UniRef100_A8XD45 UniRef100_UPI000059FF0D UniRef100_UPI000059FF0D UniRef100_P36954 UniRef100_P36954 UniRef100_Q4S925 UniRef100_Q4S925 UniRef100_Q1LVK2 UniRef100_Q1LVK2 UniRef100_C1BH34 UniRef100_C1BH34 UniRef100_C1BGM4 UniRef100_C1BGM4 UniRef100_B5FX75 UniRef100_B5FX75 UniRef100_Q32P73 UniRef100_Q32P73 UniRef100_UPI000069E0CE UniRef100_UPI000069E0CE UniRef100_Q5EAU6 UniRef100_Q5EAU6 UniRef100_UPI0000E491D4 UniRef100_UPI0000E491D4 UniRef100_B7PRG9 UniRef100_B7PRG9 UniRef100_UPI000180CB05 UniRef100_UPI000180CB05 UniRef100_UPI00015B430F UniRef100_UPI00015B430F UniRef100_Q5XJ93 UniRef100_Q5XJ93 UniRef100_C1FE61 UniRef100_C1FE61 UniRef100_Q1HRD6 UniRef100_Q1HRD6 UniRef100_B0W4J8 UniRef100_B0W4J8 UniRef100_A7SXH3 UniRef100_A7SXH3 UniRef100_Q7Q4H0 UniRef100_Q7Q4H0 UniRef100_C3XRA2 UniRef100_C3XRA2 UniRef100_P36958 UniRef100_P36958 UniRef100_B4NAN1 UniRef100_B4NAN1 UniRef100_Q299B2 UniRef100_Q299B2 UniRef100_B4MBD3 UniRef100_B4MBD3 UniRef100_UPI0000D56411 UniRef100_UPI0000D56411 UniRef100_B3LZX4 UniRef100_B3LZX4 UniRef100_B4JS70 UniRef100_B4JS70 UniRef100_UPI00003C0AF7 UniRef100_UPI00003C0AF7 UniRef100_C1BNL8 UniRef100_C1BNL8 UniRef100_UPI0001791659 UniRef100_UPI0001791659 UniRef100_C4WT20 UniRef100_C4WT20 UniRef100_C1MJZ9 UniRef100_C1MJZ9 UniRef100_A8QDP3 UniRef100_A8QDP3