AV620926 ( LC028f11_r )

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BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV620926  LC028f11_r
         (499 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_Q6SA05 Rubisco activase n=1 Tax=Chlamydomonas reinhard...   173   6e-42
UniRef100_P23489 Ribulose bisphosphate carboxylase/oxygenase act...   173   6e-42
UniRef100_O04772 Rubisco activase n=1 Tax=Chlorococcum littorale...   105   2e-21
UniRef100_C1E4S4 Ribulose bisphosphate carboxylase/oxygenase act...    98   3e-19
UniRef100_Q01AY1 RuBisCO activase (IC) n=1 Tax=Ostreococcus taur...    92   2e-17
UniRef100_A4RW20 Predicted protein n=1 Tax=Ostreococcus lucimari...    90   9e-17
UniRef100_C1MPQ3 Ribulose bisphosphate carboxylase/oxygenase act...    88   3e-16
UniRef100_Q9AT38 Ribulose-1,5-bisphosphate carboxylase activase ...    83   9e-15
UniRef100_Q19RP2 Ribulose-1,5-bisphosphate carboxylase/oxygenase...    83   9e-15
UniRef100_A9TLG8 Predicted protein n=1 Tax=Physcomitrella patens...    83   9e-15
UniRef100_Q6XW16 Ribulose-1,5-bisphosphate carboxylase activase ...    83   1e-14
UniRef100_B2BGT2 Putative ribulose-1,5-bisphosphate carboxylase/...    83   1e-14
UniRef100_Q05C31 Putative uncharacterized protein n=1 Tax=Homo s...    83   1e-14
UniRef100_Q40281 Ribulose bisphosphate carboxylase/oxygenase act...    82   1e-14
UniRef100_B7EAB2 cDNA clone:J013001C24, full insert sequence n=2...    82   2e-14
UniRef100_B9HT80 Predicted protein (Fragment) n=2 Tax=Populus tr...    82   2e-14
UniRef100_A6N1P5 Ribulose bisphosphate carboxylase/oxygenase act...    82   2e-14
UniRef100_P93431 Ribulose bisphosphate carboxylase/oxygenase act...    82   2e-14
UniRef100_Q7X999 Ribulose bisphosphate carboxylase/oxygenase act...    82   2e-14
UniRef100_Q9ATC2 Rubisco activase (Fragment) n=2 Tax=Zantedeschi...    82   3e-14
UniRef100_Q9ATC1 Rubisco activase (Fragment) n=1 Tax=Zantedeschi...    82   3e-14
UniRef100_Q9ATB9 Rubisco activase (Fragment) n=1 Tax=Zantedeschi...    82   3e-14
UniRef100_Q8L5T3 Rubisco activase n=1 Tax=Chenopodium quinoa Rep...    82   3e-14
UniRef100_A9PJ06 Putative uncharacterized protein n=1 Tax=Populu...    82   3e-14
UniRef100_A7PIQ8 Chromosome chr13 scaffold_17, whole genome shot...    82   3e-14
UniRef100_Q8GTY4 Rubisco activase (Fragment) n=1 Tax=Medicago sa...    81   3e-14
UniRef100_Q7X9A2 Rubisco activase alpha form n=1 Tax=Deschampsia...    81   3e-14
UniRef100_C0P5X6 Putative uncharacterized protein n=1 Tax=Zea ma...    81   3e-14
UniRef100_A7PNR4 Chromosome chr8 scaffold_23, whole genome shotg...    81   4e-14
UniRef100_Q06B50 Chloroplast ribulose-1,5-bisphosphate carboxyla...    80   7e-14
UniRef100_Q06B48 Chloroplast ribulose-1,5-bisphosphate carboxyla...    80   7e-14
UniRef100_A9TBP0 Predicted protein n=1 Tax=Physcomitrella patens...    80   7e-14
UniRef100_Q40073 Ribulose bisphosphate carboxylase/oxygenase act...    80   7e-14
UniRef100_Q9AXG1 Ribulose-1,5-bisphosphate carboxylase/oxygenase...    80   1e-13
UniRef100_C1K241 Chloroplast ribulose-1,5-bisphosphate carboxyla...    80   1e-13
UniRef100_A8W9B0 Chloroplast ribulose 1,5-bisphosphate carboxyla...    80   1e-13
UniRef100_A9PJF4 Putative uncharacterized protein n=1 Tax=Populu...    79   1e-13
UniRef100_O98997 Ribulose bisphosphate carboxylase/oxygenase act...    79   1e-13
UniRef100_Q9AXG0 Ribulose-1,5-bisphosphate carboxylase/oxygenase...    79   2e-13
UniRef100_Q308Y6 Ribulose-1,5-bisphosphate carboxylase/oxygenase...    79   2e-13
UniRef100_B9SDY7 Ribulose bisphosphate carboxylase/oxygenase act...    79   2e-13
UniRef100_A9NV87 Putative uncharacterized protein n=2 Tax=Picea ...    79   2e-13
UniRef100_A8QIH7 Chloroplast ribulose-1,5-bisphosphate carboxyla...    79   2e-13
UniRef100_B9HMK4 Predicted protein (Fragment) n=1 Tax=Populus tr...    79   2e-13
UniRef100_A9PG25 Putative uncharacterized protein n=1 Tax=Populu...    79   2e-13
UniRef100_A9PFQ2 Putative uncharacterized protein n=1 Tax=Populu...    79   2e-13
UniRef100_A7NYV5 Chromosome chr6 scaffold_3, whole genome shotgu...    79   2e-13
UniRef100_A5C3D4 Putative uncharacterized protein n=1 Tax=Vitis ...    79   2e-13
UniRef100_C6T859 Putative uncharacterized protein n=1 Tax=Glycin...    78   3e-13
UniRef100_O49074 Ribulose bisphosphate carboxylase/oxygenase act...    78   3e-13
UniRef100_Q7X9A1 Rubisco activase beta form n=1 Tax=Deschampsia ...    78   4e-13
UniRef100_C5Y1T6 Putative uncharacterized protein Sb05g027880 n=...    78   4e-13
UniRef100_A9NXN4 Putative uncharacterized protein n=1 Tax=Picea ...    78   4e-13
UniRef100_Q9FUI0 Ribulose 1,5-bisphosphate carboxylase/oxygenase...    77   5e-13
UniRef100_A9TBN9 Predicted protein n=1 Tax=Physcomitrella patens...    77   5e-13
UniRef100_Q9ZT00 Ribulose bisphosphate carboxylase/oxygenase act...    77   5e-13
UniRef100_C5Y1T5 Putative uncharacterized protein Sb05g027870 n=...    77   6e-13
UniRef100_B9T427 Ribulose bisphosphate carboxylase/oxygenase act...    77   6e-13
UniRef100_B1PDJ9 Chloroplast rubisco activase n=1 Tax=Capsicum a...    77   6e-13
UniRef100_P10871 Ribulose bisphosphate carboxylase/oxygenase act...    77   6e-13
UniRef100_O64981 Ribulose bisphosphate carboxylase/oxygenase act...    77   6e-13
UniRef100_Q7X9A0 Ribulose bisphosphate carboxylase/oxygenase act...    77   6e-13
UniRef100_Q9M4V3 Ribulose bisphosphate carboxylase activase B n=...    77   8e-13
UniRef100_A9TJI2 Predicted protein n=1 Tax=Physcomitrella patens...    77   8e-13
UniRef100_Q42450 Ribulose bisphosphate carboxylase/oxygenase act...    77   8e-13
UniRef100_Q40460 Ribulose bisphosphate carboxylase/oxygenase act...    77   8e-13
UniRef100_C5J0I3 Chloroplast rubisco activase n=1 Tax=Cucumis sa...    74   5e-12
UniRef100_A9UHW7 Rubisco activase n=1 Tax=Ipomoea batatas RepID=...    74   5e-12
UniRef100_A9RES5 Predicted protein n=1 Tax=Physcomitrella patens...    74   5e-12
UniRef100_Q941B7 At2g39730/T5I7.3 n=1 Tax=Arabidopsis thaliana R...    74   7e-12
UniRef100_Q8H172 At2g39730/T5I7.3 n=1 Tax=Arabidopsis thaliana R...    74   7e-12
UniRef100_Q3EBJ5 Putative uncharacterized protein At2g39730.3 n=...    74   7e-12
UniRef100_Q0WLM1 Rubisco activase (Fragment) n=1 Tax=Arabidopsis...    74   7e-12
UniRef100_P10896-2 Isoform Short of Ribulose bisphosphate carbox...    74   7e-12
UniRef100_P10896 Ribulose bisphosphate carboxylase/oxygenase act...    74   7e-12
UniRef100_B9IFW9 Predicted protein n=1 Tax=Populus trichocarpa R...    73   1e-11
UniRef100_B1PIE1 Putative ribulose-1,5-bisphosphate carboxylase/...    73   1e-11
UniRef100_Q40565 Ribulose bisphosphate carboxylase/oxygenase act...    73   1e-11
UniRef100_C0PQ99 Putative uncharacterized protein n=1 Tax=Picea ...    70   6e-11
UniRef100_A1BQW4 RuBisCO activase (Fragment) n=1 Tax=Nicotiana a...    70   6e-11
UniRef100_A4GRL9 RuBisCO activase (Fragment) n=1 Tax=Cucumis sat...    64   5e-09
UniRef100_Q01587 Ribulose bisphosphate carboxylase/oxygenase act...    64   5e-09
UniRef100_Q115H0 Ribulose 1,5-bisphosphate carboxylase small sub...    56   1e-06
UniRef100_B5W427 Ribulose bisphosphate carboxylase small chain n...    55   3e-06
UniRef100_B0CCB7 Ribulose bisphosphate carboxylase activase, put...    55   3e-06
UniRef100_Q01AV2 26S proteasome regulatory complex, ATPase RPT4 ...    54   6e-06
UniRef100_A4RW51 Predicted protein (Fragment) n=1 Tax=Ostreococc...    53   1e-05
graphical overview:
alignment
UniRef100_Q6SA05 UniRef100_Q6SA05 UniRef100_P23489 UniRef100_P23489 UniRef100_O04772 UniRef100_O04772 UniRef100_C1E4S4 UniRef100_C1E4S4 UniRef100_Q01AY1 UniRef100_Q01AY1 UniRef100_A4RW20 UniRef100_A4RW20 UniRef100_C1MPQ3 UniRef100_C1MPQ3 UniRef100_Q9AT38 UniRef100_Q9AT38 UniRef100_Q19RP2 UniRef100_Q19RP2 UniRef100_A9TLG8 UniRef100_A9TLG8 UniRef100_Q6XW16 UniRef100_Q6XW16 UniRef100_B2BGT2 UniRef100_B2BGT2 UniRef100_Q05C31 UniRef100_Q05C31 UniRef100_Q40281 UniRef100_Q40281 UniRef100_B7EAB2 UniRef100_B7EAB2 UniRef100_B9HT80 UniRef100_B9HT80 UniRef100_A6N1P5 UniRef100_A6N1P5 UniRef100_P93431 UniRef100_P93431 UniRef100_Q7X999 UniRef100_Q7X999 UniRef100_Q9ATC2 UniRef100_Q9ATC2 UniRef100_Q9ATC1 UniRef100_Q9ATC1 UniRef100_Q9ATB9 UniRef100_Q9ATB9 UniRef100_Q8L5T3 UniRef100_Q8L5T3 UniRef100_A9PJ06 UniRef100_A9PJ06 UniRef100_A7PIQ8 UniRef100_A7PIQ8 UniRef100_Q8GTY4 UniRef100_Q8GTY4 UniRef100_Q7X9A2 UniRef100_Q7X9A2 UniRef100_C0P5X6 UniRef100_C0P5X6 UniRef100_A7PNR4 UniRef100_A7PNR4 UniRef100_Q06B50 UniRef100_Q06B50 UniRef100_Q06B48 UniRef100_Q06B48 UniRef100_A9TBP0 UniRef100_A9TBP0 UniRef100_Q40073 UniRef100_Q40073 UniRef100_Q9AXG1 UniRef100_Q9AXG1 UniRef100_C1K241 UniRef100_C1K241 UniRef100_A8W9B0 UniRef100_A8W9B0 UniRef100_A9PJF4 UniRef100_A9PJF4 UniRef100_O98997 UniRef100_O98997 UniRef100_Q9AXG0 UniRef100_Q9AXG0 UniRef100_Q308Y6 UniRef100_Q308Y6 UniRef100_B9SDY7 UniRef100_B9SDY7 UniRef100_A9NV87 UniRef100_A9NV87 UniRef100_A8QIH7 UniRef100_A8QIH7 UniRef100_B9HMK4 UniRef100_B9HMK4 UniRef100_A9PG25 UniRef100_A9PG25 UniRef100_A9PFQ2 UniRef100_A9PFQ2 UniRef100_A7NYV5 UniRef100_A7NYV5 UniRef100_A5C3D4 UniRef100_A5C3D4 UniRef100_C6T859 UniRef100_C6T859 UniRef100_O49074 UniRef100_O49074 UniRef100_Q7X9A1 UniRef100_Q7X9A1 UniRef100_C5Y1T6 UniRef100_C5Y1T6 UniRef100_A9NXN4 UniRef100_A9NXN4 UniRef100_Q9FUI0 UniRef100_Q9FUI0 UniRef100_A9TBN9 UniRef100_A9TBN9 UniRef100_Q9ZT00 UniRef100_Q9ZT00 UniRef100_C5Y1T5 UniRef100_C5Y1T5 UniRef100_B9T427 UniRef100_B9T427 UniRef100_B1PDJ9 UniRef100_B1PDJ9 UniRef100_P10871 UniRef100_P10871 UniRef100_O64981 UniRef100_O64981 UniRef100_Q7X9A0 UniRef100_Q7X9A0 UniRef100_Q9M4V3 UniRef100_Q9M4V3 UniRef100_A9TJI2 UniRef100_A9TJI2 UniRef100_Q42450 UniRef100_Q42450 UniRef100_Q40460 UniRef100_Q40460 UniRef100_C5J0I3 UniRef100_C5J0I3 UniRef100_A9UHW7 UniRef100_A9UHW7 UniRef100_A9RES5 UniRef100_A9RES5 UniRef100_Q941B7 UniRef100_Q941B7 UniRef100_Q8H172 UniRef100_Q8H172 UniRef100_Q3EBJ5 UniRef100_Q3EBJ5 UniRef100_Q0WLM1 UniRef100_Q0WLM1 UniRef100_P10896-2 UniRef100_P10896-2 UniRef100_P10896 UniRef100_P10896 UniRef100_B9IFW9 UniRef100_B9IFW9 UniRef100_B1PIE1 UniRef100_B1PIE1 UniRef100_Q40565 UniRef100_Q40565 UniRef100_C0PQ99 UniRef100_C0PQ99 UniRef100_A1BQW4 UniRef100_A1BQW4 UniRef100_A4GRL9 UniRef100_A4GRL9 UniRef100_Q01587 UniRef100_Q01587 UniRef100_Q115H0 UniRef100_Q115H0 UniRef100_B5W427 UniRef100_B5W427 UniRef100_B0CCB7 UniRef100_B0CCB7 UniRef100_Q01AV2 UniRef100_Q01AV2