AV393425 ( CL03d04_r )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV393425  CL03d04_r
         (516 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_Q6VPE6 Putative integrase n=1 Tax=Petunia x hybrida Re...    55   3e-06
UniRef100_A5BRL2 Putative uncharacterized protein n=1 Tax=Vitis ...    55   3e-06
UniRef100_Q9ZVK3 Putative retroelement pol polyprotein n=1 Tax=A...    55   4e-06
UniRef100_Q7XG23 Retrotransposon protein, putative, Ty3-gypsy su...    54   5e-06
UniRef100_Q0Q536 Reverse transcriptase (Fragment) n=1 Tax=Phytop...    54   5e-06
UniRef100_UPI000198632D PREDICTED: hypothetical protein, partial...    54   6e-06
UniRef100_UPI00019857E8 PREDICTED: hypothetical protein n=1 Tax=...    54   6e-06
UniRef100_UPI0001983701 PREDICTED: hypothetical protein n=1 Tax=...    54   6e-06
UniRef100_Q94I09 Putative retroelement n=1 Tax=Oryza sativa RepI...    54   6e-06
UniRef100_Q94I04 Putative retroelement n=1 Tax=Oryza sativa RepI...    54   6e-06
UniRef100_Q60DH3 Putative polyprotein n=1 Tax=Oryza sativa Japon...    54   6e-06
UniRef100_Q33A32 Retrotransposon protein, putative, Ty3-gypsy su...    54   6e-06
UniRef100_Q33A27 Retrotransposon protein, putative, Ty3-gypsy su...    54   6e-06
UniRef100_A5C4G3 Putative uncharacterized protein n=1 Tax=Vitis ...    54   6e-06
UniRef100_A5BRB4 Putative uncharacterized protein n=1 Tax=Vitis ...    54   6e-06
UniRef100_A5BBP7 Putative uncharacterized protein n=1 Tax=Vitis ...    54   6e-06
UniRef100_C5MA51 Putative uncharacterized protein n=1 Tax=Candid...    54   6e-06
UniRef100_UPI00019834F4 PREDICTED: hypothetical protein n=1 Tax=...    54   8e-06
UniRef100_Q7XGQ4 Putative polyprotein n=2 Tax=Oryza sativa RepID...    54   8e-06
UniRef100_Q75IL2 Putative polyprotein n=1 Tax=Oryza sativa Japon...    54   8e-06
UniRef100_Q53K42 Retrotransposon protein, putative, Ty3-gypsy su...    54   8e-06
graphical overview:
alignment
UniRef100_Q6VPE6 UniRef100_Q6VPE6 UniRef100_A5BRL2 UniRef100_A5BRL2 UniRef100_Q9ZVK3 UniRef100_Q9ZVK3 UniRef100_Q7XG23 UniRef100_Q7XG23 UniRef100_Q0Q536 UniRef100_Q0Q536 UniRef100_UPI000198632D UniRef100_UPI000198632D UniRef100_UPI00019857E8 UniRef100_UPI00019857E8 UniRef100_UPI0001983701 UniRef100_UPI0001983701 UniRef100_Q94I09 UniRef100_Q94I09 UniRef100_Q94I04 UniRef100_Q94I04 UniRef100_Q60DH3 UniRef100_Q60DH3 UniRef100_Q33A32 UniRef100_Q33A32 UniRef100_Q33A27 UniRef100_Q33A27 UniRef100_A5C4G3 UniRef100_A5C4G3 UniRef100_A5BRB4 UniRef100_A5BRB4 UniRef100_A5BBP7 UniRef100_A5BBP7 UniRef100_C5MA51 UniRef100_C5MA51 UniRef100_UPI00019834F4 UniRef100_UPI00019834F4 UniRef100_Q7XGQ4 UniRef100_Q7XGQ4 UniRef100_Q75IL2 UniRef100_Q75IL2