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[1][TOP]
>UniRef100_UPI000155CB1A PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide
B n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155CB1A
Length = 1113
Score = 275 bits (703), Expect = 2e-72
Identities = 129/176 (73%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +GKF GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 933 VLDGKFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 992
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 993 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1052
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 1053 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1108
[2][TOP]
>UniRef100_UPI00005EAC23 PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide
B n=1 Tax=Monodelphis domestica RepID=UPI00005EAC23
Length = 1133
Score = 275 bits (703), Expect = 2e-72
Identities = 129/176 (73%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +GKF GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 953 VLDGKFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1012
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 1013 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1072
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 1073 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1128
[3][TOP]
>UniRef100_UPI00017B31AA UPI00017B31AA related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B31AA
Length = 1153
Score = 275 bits (702), Expect = 2e-72
Identities = 127/176 (72%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 977 VLDGRFHYGTAFGGSKVKDVCEDLIRHGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKL 1036
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 1037 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1096
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 1097 DAFEVDVCGQCGLLGYSGWCHYCKSSCQVSSLRIPYACKLLFQELQSMNIIPRLKL 1152
[4][TOP]
>UniRef100_UPI00017B31A9 UPI00017B31A9 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B31A9
Length = 1132
Score = 275 bits (702), Expect = 2e-72
Identities = 127/176 (72%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 952 VLDGRFHYGTAFGGSKVKDVCEDLIRHGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKL 1011
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 1012 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1071
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 1072 DAFEVDVCGQCGLLGYSGWCHYCKSSCQVSSLRIPYACKLLFQELQSMNIIPRLKL 1127
[5][TOP]
>UniRef100_UPI00016E4F58 UPI00016E4F58 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E4F58
Length = 1118
Score = 274 bits (701), Expect = 3e-72
Identities = 127/176 (72%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 938 VLDGRFHYGTAFGGSKVKDVCEDLIRHGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKL 997
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 998 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1057
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 1058 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1113
[6][TOP]
>UniRef100_UPI00016E4F57 UPI00016E4F57 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E4F57
Length = 1132
Score = 274 bits (701), Expect = 3e-72
Identities = 127/176 (72%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 952 VLDGRFHYGTAFGGSKVKDVCEDLIRHGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKL 1011
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 1012 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1071
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 1072 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1127
[7][TOP]
>UniRef100_UPI00005A223E PREDICTED: similar to DNA-directed RNA polymerase III subunit 127.6
kDa polypeptide (RNA polymerase III subunit 2) (RPC2) n=1
Tax=Canis lupus familiaris RepID=UPI00005A223E
Length = 1133
Score = 274 bits (701), Expect = 3e-72
Identities = 128/176 (72%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 953 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDFVTSGITGEPLEAYIYFGPVYYQKL 1012
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 1013 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1072
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 1073 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1128
[8][TOP]
>UniRef100_A2BG99 DNA-directed RNA polymerase n=1 Tax=Danio rerio RepID=A2BG99_DANRE
Length = 1130
Score = 274 bits (701), Expect = 3e-72
Identities = 127/176 (72%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 950 VLDGRFHYGTAFGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKL 1009
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 1010 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1069
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 1070 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1125
[9][TOP]
>UniRef100_UPI0001560749 PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2
(RNA polymerase III subunit C2) (DNA-directed RNA
polymerase III subunit B) (DNA-directed RNA polymerase
III 127.6 kDa polypeptide) (C128) n=1 Tax=Equus caballus
RepID=UPI0001560749
Length = 1133
Score = 274 bits (700), Expect = 4e-72
Identities = 128/176 (72%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 953 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1012
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 1013 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1072
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 1073 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1128
[10][TOP]
>UniRef100_UPI0000E23379 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide B isoform
2 n=1 Tax=Pan troglodytes RepID=UPI0000E23379
Length = 1133
Score = 274 bits (700), Expect = 4e-72
Identities = 128/176 (72%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 953 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1012
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 1013 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1072
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 1073 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1128
[11][TOP]
>UniRef100_UPI0000503D79 polymerase (RNA) III (DNA directed) polypeptide B n=2 Tax=Rattus
norvegicus RepID=UPI0000503D79
Length = 1133
Score = 274 bits (700), Expect = 4e-72
Identities = 128/176 (72%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 953 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1012
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 1013 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1072
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 1073 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1128
[12][TOP]
>UniRef100_C0PUS9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Salmo salar
RepID=C0PUS9_SALSA
Length = 814
Score = 274 bits (700), Expect = 4e-72
Identities = 126/176 (71%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEP+ AY++ GP++YQKL
Sbjct: 634 VMDGRFHYGTAFGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPIEAYIYFGPVYYQKL 693
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 694 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 753
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 754 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 809
[13][TOP]
>UniRef100_Q5NVB0 Putative uncharacterized protein DKFZp469K1717 n=1 Tax=Pongo abelii
RepID=Q5NVB0_PONAB
Length = 1116
Score = 274 bits (700), Expect = 4e-72
Identities = 128/176 (72%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 936 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 995
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 996 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1055
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 1056 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1111
[14][TOP]
>UniRef100_B3KV73 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B3KV73_HUMAN
Length = 1075
Score = 274 bits (700), Expect = 4e-72
Identities = 128/176 (72%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 895 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 954
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 955 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1014
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 1015 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1070
[15][TOP]
>UniRef100_B3KRQ8 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B3KRQ8_HUMAN
Length = 838
Score = 274 bits (700), Expect = 4e-72
Identities = 128/176 (72%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 658 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 717
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 718 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 777
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 778 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 833
[16][TOP]
>UniRef100_P59470 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Mus musculus
RepID=RPC2_MOUSE
Length = 1133
Score = 274 bits (700), Expect = 4e-72
Identities = 128/176 (72%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 953 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1012
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 1013 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1072
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 1073 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1128
[17][TOP]
>UniRef100_Q9NW08 DNA-directed RNA polymerase III subunit RPC2 n=2 Tax=Homo sapiens
RepID=RPC2_HUMAN
Length = 1133
Score = 274 bits (700), Expect = 4e-72
Identities = 128/176 (72%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 953 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1012
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 1013 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1072
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 1073 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1128
[18][TOP]
>UniRef100_UPI000194E18E PREDICTED: hypothetical protein n=1 Tax=Taeniopygia guttata
RepID=UPI000194E18E
Length = 1280
Score = 273 bits (699), Expect = 5e-72
Identities = 127/176 (72%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 1100 VLDGRFHYGTAFGGSKVKDVCEDLIRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1159
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 1160 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1219
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 1220 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1275
[19][TOP]
>UniRef100_UPI0000E7F911 PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide
B n=1 Tax=Gallus gallus RepID=UPI0000E7F911
Length = 1126
Score = 273 bits (699), Expect = 5e-72
Identities = 127/176 (72%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 946 VLDGRFHYGTAFGGSKVKDVCEDLIRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1005
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 1006 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1065
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 1066 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1121
[20][TOP]
>UniRef100_UPI0000ECD29F DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA
polymerase III subunit C2) (DNA-directed RNA polymerase
III subunit B) (DNA-directed RNA polymerase III 127.6 kDa
polypeptide) (C128). n=1 Tax=Gallus gallus
RepID=UPI0000ECD29F
Length = 1132
Score = 273 bits (699), Expect = 5e-72
Identities = 127/176 (72%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 952 VLDGRFHYGTAFGGSKVKDVCEDLIRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1011
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 1012 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1071
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 1072 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1127
[21][TOP]
>UniRef100_C3YYC3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
RepID=C3YYC3_BRAFL
Length = 1137
Score = 273 bits (697), Expect = 8e-72
Identities = 127/176 (72%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V EGKF GTAF G +++D E LV G++Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 957 VLEGKFHYGTAFGGSKVKDVCEELVQHGFNYQGKDYLTSGITGEPLNAYIYTGPVYYQKL 1016
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DK+HARA+GPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 1017 KHMVLDKIHARAKGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1076
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWCQYC++ VS+L++PYACKLLFQELQ MN+ PRLKL
Sbjct: 1077 DQFEVDVCGECGLLGYSGWCQYCKSSRNVSSLKMPYACKLLFQELQSMNIAPRLKL 1132
[22][TOP]
>UniRef100_B3KQY9 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B3KQY9_HUMAN
Length = 523
Score = 273 bits (697), Expect = 8e-72
Identities = 127/176 (72%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 343 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 402
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGA+MLL+ERLM SS
Sbjct: 403 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGANMLLLERLMISS 462
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 463 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 518
[23][TOP]
>UniRef100_UPI000179EFE0 UPI000179EFE0 related cluster n=1 Tax=Bos taurus RepID=UPI000179EFE0
Length = 796
Score = 272 bits (696), Expect = 1e-71
Identities = 127/176 (72%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 616 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 675
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 676 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 735
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC +C++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 736 DAFEVDVCGQCGLLGYSGWCHFCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 791
[24][TOP]
>UniRef100_UPI0000F339C2 PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2
(RNA polymerase III subunit C2) (DNA-directed RNA
polymerase III subunit B) (DNA-directed RNA polymerase
III 127.6 kDa polypeptide) (C128) n=1 Tax=Bos taurus
RepID=UPI0000F339C2
Length = 1133
Score = 272 bits (696), Expect = 1e-71
Identities = 127/176 (72%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E LV GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 953 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1012
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 1013 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1072
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC +C++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 1073 DAFEVDVCGQCGLLGYSGWCHFCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1128
[25][TOP]
>UniRef100_Q7Z3R8 DNA-directed RNA polymerase n=2 Tax=Homininae RepID=Q7Z3R8_HUMAN
Length = 1133
Score = 272 bits (696), Expect = 1e-71
Identities = 127/176 (72%), Positives = 145/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E LV GY+Y GKD SG TGEP AY++ GP++YQKL
Sbjct: 953 VLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPFEAYIYFGPVYYQKL 1012
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 1013 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1072
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 1073 DAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1128
[26][TOP]
>UniRef100_UPI00006A103B DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA
polymerase III subunit C2) (DNA-directed RNA polymerase
III subunit B) (DNA-directed RNA polymerase III 127.6 kDa
polypeptide) (C128). n=1 Tax=Xenopus (Silurana)
tropicalis RepID=UPI00006A103B
Length = 1122
Score = 272 bits (695), Expect = 1e-71
Identities = 126/176 (71%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 942 VLDGRFHYGTAFGGSKVKDVCEDLIRYGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1001
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 1002 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1061
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC +C++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 1062 DAFEVDVCGKCGLLGYSGWCHFCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1117
[27][TOP]
>UniRef100_UPI00004DA04E DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA
polymerase III subunit C2) (DNA-directed RNA polymerase
III subunit B) (DNA-directed RNA polymerase III 127.6 kDa
polypeptide) (C128). n=1 Tax=Xenopus (Silurana)
tropicalis RepID=UPI00004DA04E
Length = 1136
Score = 272 bits (695), Expect = 1e-71
Identities = 126/176 (71%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 956 VLDGRFHYGTAFGGSKVKDVCEDLIRYGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1015
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 1016 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1075
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC +C++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 1076 DAFEVDVCGKCGLLGYSGWCHFCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1131
[28][TOP]
>UniRef100_B2GUR3 DNA-directed RNA polymerase n=1 Tax=Xenopus (Silurana) tropicalis
RepID=B2GUR3_XENTR
Length = 1134
Score = 272 bits (695), Expect = 1e-71
Identities = 126/176 (71%), Positives = 146/176 (82%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 954 VLDGRFHYGTAFGGSKVKDVCEDLIRYGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKL 1013
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 1014 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1073
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGLLGY GWC +C++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 1074 DAFEVDVCGKCGLLGYSGWCHFCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 1129
[29][TOP]
>UniRef100_UPI00015B53C8 PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide
B n=1 Tax=Nasonia vitripennis RepID=UPI00015B53C8
Length = 1127
Score = 271 bits (692), Expect = 3e-71
Identities = 125/176 (71%), Positives = 148/176 (84%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +GKF GTAF G ++ED E LV+ GY+Y GKD+FYSG TGEPL+AY+++GP++YQKL
Sbjct: 947 VLKGKFHYGTAFGGSKVEDVCEELVSQGYNYLGKDIFYSGITGEPLQAYIYSGPVYYQKL 1006
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DKMHARARGPRA+LTRQPTEGRS+DGGLRLGEMERDCLIGYGASM+L+ERLM SS
Sbjct: 1007 KHMVQDKMHARARGPRAVLTRQPTEGRSKDGGLRLGEMERDCLIGYGASMMLIERLMLSS 1066
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V C CGL+ Y G+C CR+ A VS + +PYACKLLFQELQ MN+VPRL L
Sbjct: 1067 DAFDVDVCNKCGLMAYTGYCHSCRSSACVSTITMPYACKLLFQELQSMNIVPRLTL 1122
[30][TOP]
>UniRef100_Q54IZ9 Ddi rpc2 intein n=1 Tax=Dictyostelium discoideum RepID=RPC2_DICDI
Length = 1608
Score = 268 bits (685), Expect = 2e-70
Identities = 126/178 (70%), Positives = 144/178 (80%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V GKF GT F GDR+E+ ++ L++ G+SY GKD SG TGEPL ++F GPIFYQKL
Sbjct: 1430 VLSGKFGFGTCFGGDRVENISKVLISKGFSYGGKDYVTSGVTGEPLACFIFFGPIFYQKL 1489
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGP LTRQPTEGR+R GGLRLGEMERDCLIGYGAS L+MERLM SS
Sbjct: 1490 KHMVMDKMHARARGPTVTLTRQPTEGRARGGGLRLGEMERDCLIGYGASALIMERLMISS 1549
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D FTVYAC CG LGY+G+CQYC++ +S +QIPYACKLLFQELQ MN+VPRLKL D
Sbjct: 1550 DRFTVYACKNCGFLGYEGYCQYCKSSVDISTIQIPYACKLLFQELQAMNIVPRLKLVD 1607
[31][TOP]
>UniRef100_Q4S7G7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon nigroviridis
RepID=Q4S7G7_TETNG
Length = 1171
Score = 266 bits (681), Expect = 6e-70
Identities = 127/186 (68%), Positives = 146/186 (78%), Gaps = 10/186 (5%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G +++D E L+ GY+Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 981 VLDGRFHYGTAFGGSKVKDVCEDLIRHGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKL 1040
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 1041 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISS 1100
Query: 362 DVFTVYACGTCGLLGYKGW----------CQYCRTGAAVSALQIPYACKLLFQELQGMNV 511
D F V CG CGLLGY GW C YC++ VS+L+IPYACKLLFQELQ MN+
Sbjct: 1101 DAFEVDVCGQCGLLGYSGWQVKLSHLDLECHYCKSSCQVSSLRIPYACKLLFQELQSMNI 1160
Query: 512 VPRLKL 529
+PRLKL
Sbjct: 1161 IPRLKL 1166
[32][TOP]
>UniRef100_UPI000180BF5A PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide
B n=1 Tax=Ciona intestinalis RepID=UPI000180BF5A
Length = 1141
Score = 265 bits (677), Expect = 2e-69
Identities = 123/173 (71%), Positives = 141/173 (81%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
GKF GTAF GD++ED ++ L GY+Y GKD SG TGE AY++ GP++YQKLKHM
Sbjct: 964 GKFHYGTAFGGDKVEDLSQVLTDNGYNYVGKDCLTSGITGESFEAYIYQGPVYYQKLKHM 1023
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V DKMHARARGPRA+LTRQPTEGRS DGGLRLGEMERDCLIGYGASMLL+ERLM SSD F
Sbjct: 1024 VLDKMHARARGPRAVLTRQPTEGRSHDGGLRLGEMERDCLIGYGASMLLLERLMISSDQF 1083
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
V CG CGLLGY GWCQ+C++ V+ L+IPYACKLLFQEL MN++PRLKL
Sbjct: 1084 EVDVCGKCGLLGYDGWCQFCKSSKNVATLKIPYACKLLFQELTSMNIIPRLKL 1136
[33][TOP]
>UniRef100_B3S5S8 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
RepID=B3S5S8_TRIAD
Length = 1016
Score = 264 bits (675), Expect = 3e-69
Identities = 123/174 (70%), Positives = 140/174 (80%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
+GKFR GTAFDGD++ED + L+ YSY+GKD SG TGE L AY+F GP++YQ+LKH
Sbjct: 838 DGKFRYGTAFDGDKLEDLCQTLIDYNYSYAGKDYLTSGITGEGLSAYIFFGPVYYQRLKH 897
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV DKMHARA+GPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG SMLL+ERLM SSD
Sbjct: 898 MVLDKMHARAKGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGTSMLLVERLMISSDA 957
Query: 368 FTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
F V C CGLL Y WC YC + VS+LQIPYACKLLFQELQ MN++PRL L
Sbjct: 958 FEVDVCNNCGLLAYSKWCHYCHSSCHVSSLQIPYACKLLFQELQSMNIIPRLSL 1011
[34][TOP]
>UniRef100_UPI0000E4965C PREDICTED: similar to RNA polymerase III subunit RPC2, partial n=1
Tax=Strongylocentrotus purpuratus RepID=UPI0000E4965C
Length = 313
Score = 264 bits (674), Expect = 4e-69
Identities = 123/176 (69%), Positives = 143/176 (81%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V EGKF GTAF GD++ D E L G++Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 133 VLEGKFHYGTAFGGDKVVDICEDLRKHGFNYLGKDFLTSGITGEPLTAYIYFGPVYYQKL 192
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARA+GPRA+LTRQPTEGR+RDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 193 KHMVLDKMHARAKGPRAVLTRQPTEGRARDGGLRLGEMERDCLIGYGASMLLLERLMISS 252
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGL+G+ GWC YC +S+L+IPYACKLLFQELQ MN++PRL+L
Sbjct: 253 DQFQVDVCGDCGLIGHSGWCPYCHCSQNISSLRIPYACKLLFQELQSMNIIPRLRL 308
[35][TOP]
>UniRef100_UPI0000E487B4 PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide
B n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E487B4
Length = 830
Score = 264 bits (674), Expect = 4e-69
Identities = 123/176 (69%), Positives = 143/176 (81%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V EGKF GTAF GD++ D E L G++Y GKD SG TGEPL AY++ GP++YQKL
Sbjct: 650 VLEGKFHYGTAFGGDKVVDICEDLRKHGFNYLGKDFLTSGITGEPLTAYIYFGPVYYQKL 709
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARA+GPRA+LTRQPTEGR+RDGGLRLGEMERDCLIGYGASMLL+ERLM SS
Sbjct: 710 KHMVLDKMHARAKGPRAVLTRQPTEGRARDGGLRLGEMERDCLIGYGASMLLLERLMISS 769
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V CG CGL+G+ GWC YC +S+L+IPYACKLLFQELQ MN++PRL+L
Sbjct: 770 DQFQVDVCGDCGLIGHSGWCPYCHCSQNISSLRIPYACKLLFQELQSMNIIPRLRL 825
[36][TOP]
>UniRef100_UPI000051A146 PREDICTED: similar to DNA-directed RNA polymerase III subunit 127.6
kDa polypeptide (RNA polymerase III subunit 2) (RPC2)
isoform 1 n=1 Tax=Apis mellifera RepID=UPI000051A146
Length = 1134
Score = 261 bits (667), Expect = 3e-68
Identities = 118/176 (67%), Positives = 144/176 (81%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F GTAF G ++ED LV G++Y GKD FYSG TGEPL+AY+++GP++YQKL
Sbjct: 954 VIKGEFHYGTAFGGSKVEDVCAELVKHGFNYLGKDFFYSGITGEPLQAYIYSGPVYYQKL 1013
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DKMHARARGPRA+LTRQPT GR+++GGLRLGEMERDCLIGYGASM+L+ERLM SS
Sbjct: 1014 KHMVQDKMHARARGPRAVLTRQPTGGRAKEGGLRLGEMERDCLIGYGASMMLIERLMISS 1073
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F + C CGL+ Y GWC CR+ + VS + +PYACKLLFQELQ MN+VPRL L
Sbjct: 1074 DAFDIDVCNKCGLMAYSGWCHSCRSSSCVSTISMPYACKLLFQELQSMNIVPRLTL 1129
[37][TOP]
>UniRef100_A8NJT3 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea okayama7#130
RepID=A8NJT3_COPC7
Length = 1140
Score = 261 bits (667), Expect = 3e-68
Identities = 124/175 (70%), Positives = 140/175 (80%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
GK + GTAF G ++ED + L+ G+SY GKDM SG TGEPL AYV+ GPI+YQKLKHM
Sbjct: 965 GKLQYGTAFGGSKVEDMSRILIEHGFSYGGKDMLTSGITGEPLEAYVYFGPIYYQKLKHM 1024
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V DKMHARARGPRA LTRQPTEGRSR+GGLRLGEMERDCLIGYGA+ LL+ERLM SSD F
Sbjct: 1025 VMDKMHARARGPRATLTRQPTEGRSREGGLRLGEMERDCLIGYGATQLLLERLMISSDKF 1084
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
V AC CGL+GY GWC YC++ ++ L IPYA KLLFQEL MNVVPRL LDD
Sbjct: 1085 EVGACQECGLMGYNGWCTYCKSSKKMATLTIPYAAKLLFQELMAMNVVPRLVLDD 1139
[38][TOP]
>UniRef100_B0D7Q0 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0D7Q0_LACBS
Length = 1142
Score = 261 bits (666), Expect = 3e-68
Identities = 124/175 (70%), Positives = 141/175 (80%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
GK + GTAF G ++ED + L+ G+SY+GKDM SG TGEPL AYV+ GPI+YQKLKHM
Sbjct: 967 GKLQYGTAFGGSKVEDMSRILIDHGFSYAGKDMLTSGITGEPLEAYVYFGPIYYQKLKHM 1026
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V DKMHARARGPRA LTRQPTEGRSR+GGLRLGEMERDCLIGYGA+ LL+ERLM SSD F
Sbjct: 1027 VMDKMHARARGPRATLTRQPTEGRSREGGLRLGEMERDCLIGYGATQLLLERLMISSDKF 1086
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
V AC CGL+GY GWC YC++ ++ L IPYA KLLFQEL MNVVPRL LDD
Sbjct: 1087 EVNACEECGLMGYNGWCTYCKSSKKMAQLTIPYAAKLLFQELMAMNVVPRLILDD 1141
[39][TOP]
>UniRef100_Q7Q416 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7Q416_ANOGA
Length = 1089
Score = 259 bits (663), Expect = 7e-68
Identities = 120/178 (67%), Positives = 141/178 (79%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V EGKF GTAF G + D + L G++Y GKD+FYSG TGEPL Y+++GP++YQKL
Sbjct: 911 VLEGKFHYGTAFGGSKCSDLQDELFNHGFNYLGKDVFYSGITGEPLEVYIYSGPVYYQKL 970
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DKMHARARGPRA+LTRQPT+GRSR+GGLRLGEMERDCLI YGASML+MERLM SS
Sbjct: 971 KHMVQDKMHARARGPRAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISS 1030
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C CG L Y WC CR+ A+VS + +PYACKLLFQEL MN+VPRLKL +
Sbjct: 1031 DAFDVDVCNVCGRLAYSSWCHNCRSSASVSTISMPYACKLLFQELTSMNIVPRLKLQN 1088
[40][TOP]
>UniRef100_A8P4S3 DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide,
putative n=1 Tax=Brugia malayi RepID=A8P4S3_BRUMA
Length = 1104
Score = 258 bits (659), Expect = 2e-67
Identities = 121/176 (68%), Positives = 141/176 (80%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V GKF GTAF GD+++ E L A G++Y GKDM SG TG+ L AY++ GPI+YQKL
Sbjct: 924 VLSGKFHYGTAFGGDQVDIVCEELAARGFNYLGKDMLTSGITGQQLSAYIYFGPIYYQKL 983
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGR+RDGGLRLGEMERDCLI YGASMLLMERLM SS
Sbjct: 984 KHMVLDKMHARARGPRAVLTRQPTEGRARDGGLRLGEMERDCLIAYGASMLLMERLMVSS 1043
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V C CGL+GYK WCQ CR+ ++ ++IPYACKLLFQELQ MN+VP++ L
Sbjct: 1044 DEFKVDVCSQCGLIGYKSWCQMCRSSRTMATIKIPYACKLLFQELQSMNIVPKISL 1099
[41][TOP]
>UniRef100_Q27492 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis elegans
RepID=Q27492_CAEEL
Length = 1154
Score = 258 bits (658), Expect = 3e-67
Identities = 122/176 (69%), Positives = 142/176 (80%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G + GTAF GD+++D E L A GY+Y GKDM SG TG+PL AY++ GPI+YQKL
Sbjct: 974 VVNGTYHYGTAFGGDQVKDVCEELAACGYNYMGKDMLTSGITGQPLSAYIYFGPIYYQKL 1033
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA LTRQPTEGRSR+GGLRLGEMERDCLI YGASMLL+ERLM SS
Sbjct: 1034 KHMVLDKMHARARGPRAALTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLIERLMVSS 1093
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V C CG++G KGWCQ CR+ +++ ++IPYACKLLFQELQ MN+VPRL L
Sbjct: 1094 DEFKVDVCTGCGVIGSKGWCQKCRSSKSMANIKIPYACKLLFQELQSMNIVPRLDL 1149
[42][TOP]
>UniRef100_B6VBN7 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis brenneri
RepID=B6VBN7_CAEBE
Length = 1152
Score = 258 bits (658), Expect = 3e-67
Identities = 122/176 (69%), Positives = 142/176 (80%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G + GTAF GD+++D E L A GY+Y GKDM SG TG+PL AY++ GPI+YQKL
Sbjct: 972 VMNGTYHYGTAFGGDQVKDVCEELAARGYNYMGKDMLTSGITGQPLSAYIYFGPIYYQKL 1031
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA LTRQPTEGRSR+GGLRLGEMERDCLI YGASMLL+ERLM SS
Sbjct: 1032 KHMVLDKMHARARGPRAALTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLIERLMVSS 1091
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V C CG++G KGWCQ CR+ +++ ++IPYACKLLFQELQ MN+VPRL L
Sbjct: 1092 DEFKVDVCTGCGVIGSKGWCQKCRSSKSMANIKIPYACKLLFQELQSMNIVPRLDL 1147
[43][TOP]
>UniRef100_B7FVD4 DNA-directed RNA polymerase n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B7FVD4_PHATR
Length = 1211
Score = 257 bits (657), Expect = 4e-67
Identities = 121/183 (66%), Positives = 146/183 (79%), Gaps = 5/183 (2%)
Frame = +2
Query: 2 VHEGKFRMGTAF-----DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPI 166
++EG+ +AF D + +EAL+ G +Y+GKD+ YSG+ GEPL AY+F+GP+
Sbjct: 1028 LYEGRQGYSSAFGEEFGSADTAQSASEALLRNGLNYTGKDILYSGTNGEPLDAYIFSGPV 1087
Query: 167 FYQKLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMER 346
FYQKLKHMV DK HARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S L+MER
Sbjct: 1088 FYQKLKHMVLDKAHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGVSNLIMER 1147
Query: 347 LMHSSDVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526
LMHSSD F+ C TCGLL Y+GWCQYCR+G V+ +++PYACKLLFQELQ MNV+PRL+
Sbjct: 1148 LMHSSDAFSANVCLTCGLLQYEGWCQYCRSGEKVADIRLPYACKLLFQELQSMNVLPRLR 1207
Query: 527 LDD 535
L D
Sbjct: 1208 LQD 1210
[44][TOP]
>UniRef100_B4MR22 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4MR22_DROWI
Length = 999
Score = 256 bits (655), Expect = 6e-67
Identities = 119/178 (66%), Positives = 142/178 (79%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V EGKF GTAF G +++D LV G++Y GKD FYSG TG PL AY+++GP++YQKL
Sbjct: 821 VLEGKFHYGTAFGGSKVQDIQAELVRHGFNYMGKDFFYSGITGAPLEAYIYSGPVYYQKL 880
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DKMHARARGP+A+LTRQPT+GRSR+GGLRLGEMERDCLI YGASML+MERLM SS
Sbjct: 881 KHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISS 940
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C CG L Y WC +C++ A VS + +PYACKLLFQEL MNVVP+L L+D
Sbjct: 941 DAFEVDVCRICGRLAYCSWCHFCQSSAHVSKISMPYACKLLFQELTSMNVVPKLILED 998
[45][TOP]
>UniRef100_B8BQM2 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8BQM2_THAPS
Length = 1108
Score = 256 bits (653), Expect = 1e-66
Identities = 122/183 (66%), Positives = 144/183 (78%), Gaps = 5/183 (2%)
Frame = +2
Query: 2 VHEGKFRMGTAF-----DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPI 166
V EG+ +AF D ++ AL+ G +Y+GKD+FYSG G PL AY+F+GP+
Sbjct: 925 VFEGRQAYASAFGEEFGSTDTVQSAELALIRNGLNYTGKDIFYSGVNGAPLDAYIFSGPV 984
Query: 167 FYQKLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMER 346
FYQKLKHMV DKMHAR+RGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YGAS L+MER
Sbjct: 985 FYQKLKHMVLDKMHARSRGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGASNLIMER 1044
Query: 347 LMHSSDVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526
LMHSSD F+ C TCGLL Y+ WCQYCR+G VS +++PYACKLLFQELQ MNV+PRL+
Sbjct: 1045 LMHSSDAFSASVCMTCGLLQYQNWCQYCRSGEKVSDIRLPYACKLLFQELQAMNVLPRLR 1104
Query: 527 LDD 535
L D
Sbjct: 1105 LKD 1107
[46][TOP]
>UniRef100_B3MH37 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3MH37_DROAN
Length = 1137
Score = 256 bits (653), Expect = 1e-66
Identities = 118/178 (66%), Positives = 142/178 (79%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V EGKF GTAF G +++D L G++Y GKD FYSG TG PL AY+++GP++YQKL
Sbjct: 959 VLEGKFHYGTAFGGSKVQDIQAELERHGFNYMGKDFFYSGITGAPLEAYIYSGPVYYQKL 1018
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DKMHARARGP+A+LTRQPT+GRSR+GGLRLGEMERDCLI YGASML+MERLM SS
Sbjct: 1019 KHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISS 1078
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C TCG L Y WC +C++ A VS + +PYACKLLFQEL MNVVP++ L+D
Sbjct: 1079 DAFEVDVCRTCGRLAYCSWCHFCQSSAYVSKISMPYACKLLFQELTSMNVVPKMILED 1136
[47][TOP]
>UniRef100_C1FIF0 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1FIF0_9CHLO
Length = 1159
Score = 255 bits (652), Expect = 1e-66
Identities = 122/184 (66%), Positives = 142/184 (77%), Gaps = 6/184 (3%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
+ +GKF+ GTAF GD + +E LV G+SY+GKD+ + G TGEPL AY+F GP++YQKL
Sbjct: 975 LQDGKFKYGTAFGGDTVTSLSEVLVEHGFSYNGKDLMHCGITGEPLVAYIFMGPVYYQKL 1034
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPR +LTRQPTEGR+RDGGLRLGEMERDCLIGYGA+ML++ERLM SS
Sbjct: 1035 KHMVLDKMHARARGPRVVLTRQPTEGRARDGGLRLGEMERDCLIGYGAAMLILERLMISS 1094
Query: 362 DVFTVYACGTCGLLGYK------GWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
D F C CGLLGYK CQ C G VSAL++PYACKLLFQELQ MN+ PRL
Sbjct: 1095 DQFEAQVCTNCGLLGYKHHGTGRNLCQQCADGGTVSALKLPYACKLLFQELQSMNICPRL 1154
Query: 524 KLDD 535
L D
Sbjct: 1155 TLSD 1158
[48][TOP]
>UniRef100_B4LKV4 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
RepID=B4LKV4_DROVI
Length = 1137
Score = 255 bits (651), Expect = 2e-66
Identities = 119/178 (66%), Positives = 142/178 (79%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V EGKF GTAF G + D LV G++Y GKD+FYSG TG PL AY+++GP++YQKL
Sbjct: 959 VLEGKFHYGTAFGGSKAADVQAELVRHGFNYMGKDLFYSGITGAPLEAYIYSGPVYYQKL 1018
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DKMHARARGP+A+LTRQPT+GRSR+GGLRLGEMERDCLI YGASML+MERLM SS
Sbjct: 1019 KHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISS 1078
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C TCG L Y WC +C++ A VS + +PYACKLLFQEL MNVVP+L L++
Sbjct: 1079 DAFEVDVCRTCGRLAYCSWCHFCQSSAHVSKISMPYACKLLFQELTSMNVVPKLILEN 1136
[49][TOP]
>UniRef100_Q28ZV6 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura
pseudoobscura RepID=Q28ZV6_DROPS
Length = 1137
Score = 254 bits (650), Expect = 2e-66
Identities = 118/178 (66%), Positives = 142/178 (79%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V EGKF GTAF G ++ D L G++Y GKD FYSG TG PL+AY+++GP++YQKL
Sbjct: 959 VLEGKFHYGTAFGGSKVGDIQAELERHGFNYMGKDFFYSGITGAPLQAYIYSGPVYYQKL 1018
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DKMHARARGP+A+LTRQPT+GRSR+GGLRLGEMERDCLI YGASML+MERLM SS
Sbjct: 1019 KHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISS 1078
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C TCG L Y WC +C++ A VS + +PYACKLLFQEL MNVVP++ L+D
Sbjct: 1079 DAFEVDVCRTCGRLAYCSWCHFCQSSAHVSKISMPYACKLLFQELTSMNVVPKMILED 1136
[50][TOP]
>UniRef100_B4GGQ4 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis
RepID=B4GGQ4_DROPE
Length = 1137
Score = 254 bits (650), Expect = 2e-66
Identities = 118/178 (66%), Positives = 142/178 (79%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V EGKF GTAF G ++ D L G++Y GKD FYSG TG PL+AY+++GP++YQKL
Sbjct: 959 VLEGKFHYGTAFGGSKVGDIQAELERHGFNYMGKDFFYSGITGAPLQAYIYSGPVYYQKL 1018
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DKMHARARGP+A+LTRQPT+GRSR+GGLRLGEMERDCLI YGASML+MERLM SS
Sbjct: 1019 KHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISS 1078
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C TCG L Y WC +C++ A VS + +PYACKLLFQEL MNVVP++ L+D
Sbjct: 1079 DAFEVDVCRTCGRLAYCSWCHFCQSSAHVSKISMPYACKLLFQELTSMNVVPKMILED 1136
[51][TOP]
>UniRef100_B4P5Q3 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4P5Q3_DROYA
Length = 1137
Score = 254 bits (649), Expect = 3e-66
Identities = 117/176 (66%), Positives = 141/176 (80%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
EGKF GTAF G ++ED L G++Y GKD FYSG TG PL AY+++GP++YQKLKH
Sbjct: 961 EGKFHYGTAFGGSKVEDIQAELERHGFNYVGKDFFYSGITGTPLEAYIYSGPVYYQKLKH 1020
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV+DKMHARARGP+A+LTRQPT+GRSR+GGLRLGEMERDCLI YGASML+MERLM SSD
Sbjct: 1021 MVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISSDA 1080
Query: 368 FTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
F V C TCG L Y WC +C++ A VS + +PYACKLLFQEL MNVVP++ L++
Sbjct: 1081 FEVDVCRTCGRLAYCSWCHFCQSSANVSKISMPYACKLLFQELTSMNVVPKMILEN 1136
[52][TOP]
>UniRef100_B4KPU7 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4KPU7_DROMO
Length = 1136
Score = 254 bits (649), Expect = 3e-66
Identities = 119/178 (66%), Positives = 141/178 (79%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V EGKF GTAF G + D LV G++Y GKD FYSG TG PL AY+++GP++YQKL
Sbjct: 958 VLEGKFHYGTAFGGSKAADVQAELVRHGFNYMGKDFFYSGITGAPLEAYIYSGPVYYQKL 1017
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DKMHARARGP+A+LTRQPT+GRSR+GGLRLGEMERDCLI YGASML+MERLM SS
Sbjct: 1018 KHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISS 1077
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C TCG L Y WC +C++ A VS + +PYACKLLFQEL MNVVP+L L++
Sbjct: 1078 DAFEVDVCRTCGRLAYCSWCHFCQSSAHVSKISMPYACKLLFQELTSMNVVPKLILEN 1135
[53][TOP]
>UniRef100_B3NS93 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3NS93_DROER
Length = 1137
Score = 254 bits (649), Expect = 3e-66
Identities = 117/176 (66%), Positives = 141/176 (80%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
EGKF GTAF G ++ED L G++Y GKD FYSG TG PL AY+++GP++YQKLKH
Sbjct: 961 EGKFHYGTAFGGSKVEDIQAELERHGFNYVGKDFFYSGITGAPLEAYIYSGPVYYQKLKH 1020
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV+DKMHARARGP+A+LTRQPT+GRSR+GGLRLGEMERDCLI YGASML+MERLM SSD
Sbjct: 1021 MVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISSDA 1080
Query: 368 FTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
F V C TCG L Y WC +C++ A VS + +PYACKLLFQEL MNVVP++ L++
Sbjct: 1081 FEVDVCRTCGRLAYCSWCHFCQSSANVSKISMPYACKLLFQELTSMNVVPKMILEN 1136
[54][TOP]
>UniRef100_A9V2W9 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis
RepID=A9V2W9_MONBE
Length = 1097
Score = 254 bits (649), Expect = 3e-66
Identities = 118/176 (67%), Positives = 138/176 (78%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G + GTAF G I + L+ GY+Y GKD SG TGEPL +Y+F GP+FYQKL
Sbjct: 917 VLNGNYNYGTAFGGTTIPEMCNTLLKHGYNYHGKDYLTSGITGEPLESYIFMGPVFYQKL 976
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHAR++GP LLTRQPTEGR+R+GGLRLGEMERDCLIG+G+SMLL+ERLM SS
Sbjct: 977 KHMVMDKMHARSQGPMTLLTRQPTEGRAREGGLRLGEMERDCLIGHGSSMLLLERLMISS 1036
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D F V+AC CGLLG GWCQYC++ +S LQ+PYACKLLFQELQ MN+VPRL L
Sbjct: 1037 DAFEVHACSQCGLLGSAGWCQYCKSSRGISKLQLPYACKLLFQELQSMNIVPRLTL 1092
[55][TOP]
>UniRef100_B6JW67 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6JW67_SCHJY
Length = 1160
Score = 254 bits (649), Expect = 3e-66
Identities = 123/178 (69%), Positives = 135/178 (75%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G GT F G R+ED + LV GY+YSGKDM SG TGE L AY+F GPI+YQKL
Sbjct: 979 VLRGTLEYGTCFGGSRVEDMSRILVEHGYNYSGKDMLTSGITGEQLEAYIFFGPIYYQKL 1038
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YGAS LL+ERLM SS
Sbjct: 1039 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGASQLLLERLMLSS 1098
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C CGLLGYKGWC C + V + IPYA KLLFQEL MN++PRL L+D
Sbjct: 1099 DAFEVDVCENCGLLGYKGWCNSCESSKHVVKMTIPYAAKLLFQELMSMNIIPRLALED 1156
[56][TOP]
>UniRef100_B4J5G6 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4J5G6_DROGR
Length = 1137
Score = 254 bits (648), Expect = 4e-66
Identities = 119/178 (66%), Positives = 141/178 (79%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V EGKF GTAF G + D LV G++Y GKD FYSG TG PL AY+++GP++YQKL
Sbjct: 959 VLEGKFHYGTAFGGSKAADVQAELVRHGFNYMGKDFFYSGITGGPLEAYIYSGPVYYQKL 1018
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DKMHARARGP+A+LTRQPT+GRSR+GGLRLGEMERDCLI YGASML+MERLM SS
Sbjct: 1019 KHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISS 1078
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C TCG L Y WC +C++ A VS + +PYACKLLFQEL MNVVP+L L++
Sbjct: 1079 DAFEVDVCRTCGRLAYCSWCHFCQSSAHVSKISMPYACKLLFQELTSMNVVPKLILEN 1136
[57][TOP]
>UniRef100_B4QC69 DNA-directed RNA polymerase n=2 Tax=melanogaster subgroup
RepID=B4QC69_DROSI
Length = 1137
Score = 254 bits (648), Expect = 4e-66
Identities = 116/176 (65%), Positives = 141/176 (80%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
EGKF GTAF G ++ED L G++Y GKD FYSG TG PL AY+++GP++YQKLKH
Sbjct: 961 EGKFHYGTAFGGSKVEDIQAELERHGFNYVGKDFFYSGITGSPLEAYIYSGPVYYQKLKH 1020
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV+DKMHARARGP+A+LTRQPT+GRSR+GGLRLGEMERDCLI YGASML+MERLM SSD
Sbjct: 1021 MVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISSDA 1080
Query: 368 FTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
F V C TCG + Y WC +C++ A VS + +PYACKLLFQEL MNVVP++ L++
Sbjct: 1081 FEVDVCRTCGRMAYCSWCHFCQSSANVSKISMPYACKLLFQELTSMNVVPKMILEN 1136
[58][TOP]
>UniRef100_Q6CEE6 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6CEE6_YARLI
Length = 1169
Score = 254 bits (648), Expect = 4e-66
Identities = 120/178 (67%), Positives = 141/178 (79%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G + GT F G ++ED ++ LV GYSYSGKDM YSG++GE L+AY+F GPI+YQKL
Sbjct: 990 VLDGSLQYGTCFGGSKLEDMSKILVDHGYSYSGKDMLYSGTSGECLQAYIFFGPIYYQKL 1049
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHAR RGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM+SS
Sbjct: 1050 KHMVMDKMHARPRGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMYSS 1109
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F C CGLLGY+GWC C+T A V + +PYA KLLFQEL MN+ PRLKL +
Sbjct: 1110 DAFEADVCQKCGLLGYQGWCNSCQTTAHVVKMTLPYAAKLLFQELVSMNIAPRLKLKE 1167
[59][TOP]
>UniRef100_C5DY85 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DY85_ZYGRC
Length = 1143
Score = 254 bits (648), Expect = 4e-66
Identities = 119/178 (66%), Positives = 139/178 (78%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G GT F G ++ED ++ LV G++YSGKDM YSG TGE L+AY+F GPI+YQKL
Sbjct: 962 VMNGSLEYGTCFGGSKLEDMSQILVDNGFNYSGKDMLYSGVTGECLQAYIFFGPIYYQKL 1021
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS
Sbjct: 1022 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMTSS 1081
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C CGL+GY GWC CR+ ++ + IPYA KLLFQEL MN+ PRL+L+D
Sbjct: 1082 DAFEVEVCEKCGLMGYSGWCTTCRSAEHINKMSIPYAAKLLFQELLSMNIAPRLRLED 1139
[60][TOP]
>UniRef100_UPI000151B156 DNA-directed RNA polymerase III 130 kDa polypeptide n=1 Tax=Pichia
guilliermondii ATCC 6260 RepID=UPI000151B156
Length = 1156
Score = 253 bits (647), Expect = 5e-66
Identities = 121/178 (67%), Positives = 137/178 (76%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G GT F G ++ED +E LV G++YSGKDM YSG TGE L+AY+F GPI+YQKL
Sbjct: 977 VLNGSLEYGTCFGGSKLEDMSEILVKNGFNYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1036
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS
Sbjct: 1037 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMLSS 1096
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C CGL+GY WC C++ V + IPYA KLLFQEL MN+ PRLKLDD
Sbjct: 1097 DAFEVDVCNNCGLMGYNSWCTSCKSSENVIKMTIPYAAKLLFQELLSMNIAPRLKLDD 1154
[61][TOP]
>UniRef100_A5DLE5 DNA-directed RNA polymerase n=1 Tax=Pichia guilliermondii
RepID=A5DLE5_PICGU
Length = 1156
Score = 253 bits (647), Expect = 5e-66
Identities = 121/178 (67%), Positives = 137/178 (76%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G GT F G ++ED +E LV G++YSGKDM YSG TGE L+AY+F GPI+YQKL
Sbjct: 977 VLNGSLEYGTCFGGSKLEDMSEILVKNGFNYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1036
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS
Sbjct: 1037 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMLSS 1096
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C CGL+GY WC C++ V + IPYA KLLFQEL MN+ PRLKLDD
Sbjct: 1097 DAFEVDVCNNCGLMGYNSWCTSCKSSENVIKMTIPYAAKLLFQELLSMNIAPRLKLDD 1154
[62][TOP]
>UniRef100_P25167 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Drosophila
melanogaster RepID=RPC2_DROME
Length = 1137
Score = 253 bits (647), Expect = 5e-66
Identities = 116/176 (65%), Positives = 141/176 (80%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
EGKF GTAF G ++ED L G++Y GKD FYSG TG PL AY+++GP++YQKLKH
Sbjct: 961 EGKFHYGTAFGGSKVEDIQAELERHGFNYVGKDFFYSGITGTPLEAYIYSGPVYYQKLKH 1020
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV+DKMHARARGP+A+LTRQPT+GRSR+GGLRLGEMERDCLI YGASML+MERLM SSD
Sbjct: 1021 MVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISSDA 1080
Query: 368 FTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
F V C TCG + Y WC +C++ A VS + +PYACKLLFQEL MNVVP++ L++
Sbjct: 1081 FEVDVCRTCGRMAYCSWCHFCQSSANVSKISMPYACKLLFQELTSMNVVPKMILEN 1136
[63][TOP]
>UniRef100_Q10233 DNA-directed RNA polymerase III subunit RPC2 n=1
Tax=Schizosaccharomyces pombe RepID=RPC2_SCHPO
Length = 1165
Score = 253 bits (646), Expect = 7e-66
Identities = 123/178 (69%), Positives = 136/178 (76%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G GT F G ++ED + LV GY+YSGKDM SG TGE L AY+F GPI+YQKL
Sbjct: 984 VLRGTLEYGTCFGGTKVEDASRILVEHGYNYSGKDMLTSGITGETLEAYIFMGPIYYQKL 1043
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YGAS LL+ERLM SS
Sbjct: 1044 KHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGASQLLLERLMISS 1103
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D V CG CGLLGYKGWC C++ V + IPYA KLLFQEL MN+VPRL L+D
Sbjct: 1104 DACDVDVCGQCGLLGYKGWCNSCQSTREVVKMTIPYAAKLLFQELLSMNIVPRLALED 1161
[64][TOP]
>UniRef100_B7Q0E7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixodes scapularis
RepID=B7Q0E7_IXOSC
Length = 1141
Score = 253 bits (645), Expect = 9e-66
Identities = 117/176 (66%), Positives = 140/176 (79%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V GKF GTAF G +++D E L+ G++Y GKD SG TGEPL AY++ GPI+YQKL
Sbjct: 961 VLNGKFHYGTAFGGSKVQDVGEELIRRGFNYRGKDCLTSGITGEPLSAYIYFGPIYYQKL 1020
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DK+HARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIG+GAS+LL+ERLM SS
Sbjct: 1021 KHMVMDKVHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGHGASLLLLERLMLSS 1080
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
D V C CGLLGY WC +CR+ +++L++PYACKLLFQEL MN++PRL L
Sbjct: 1081 DACQVDVCRGCGLLGYSRWCHFCRSSRTMASLRVPYACKLLFQELLSMNIIPRLDL 1136
[65][TOP]
>UniRef100_UPI0000D56081 PREDICTED: similar to RNA polymerase III 128kD subunit CG8344-PA n=1
Tax=Tribolium castaneum RepID=UPI0000D56081
Length = 1122
Score = 251 bits (642), Expect = 2e-65
Identities = 116/175 (66%), Positives = 137/175 (78%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
EGKF GTAF G ++ D E L G++Y GKD FYSG TGEPL AY+++GP++YQKLKH
Sbjct: 944 EGKFHYGTAFGGSKVNDVCEELAKHGFNYQGKDFFYSGITGEPLEAYIYSGPVYYQKLKH 1003
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV+DK+HAR RGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASM+L+ERLM SSD
Sbjct: 1004 MVQDKIHARGRGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMMLIERLMVSSDQ 1063
Query: 368 FTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
V C CG LGY GWC C++ VS++ +PYACKLL ELQ MN+ RL L+
Sbjct: 1064 CEVDVCNLCGRLGYCGWCNSCKSSREVSSITMPYACKLLLTELQAMNITARLTLN 1118
[66][TOP]
>UniRef100_Q6FLJ9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
RepID=Q6FLJ9_CANGA
Length = 1133
Score = 251 bits (642), Expect = 2e-65
Identities = 118/178 (66%), Positives = 138/178 (77%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G GT F G ++ED ++ LV G++YSGKDM YSG TGE L+AY+F GPI+YQKL
Sbjct: 952 VLNGSLEYGTCFGGSKLEDMSKILVDQGFNYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1011
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS
Sbjct: 1012 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMISS 1071
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C CGL+GY GWC C++ + + IPYA KLLFQEL MN+ PRL+L+D
Sbjct: 1072 DAFEVDVCSNCGLMGYSGWCSTCKSAEHIIKMTIPYAAKLLFQELLAMNIAPRLRLED 1129
[67][TOP]
>UniRef100_C4M3E3 DNA-directed RNA polymerase n=1 Tax=Entamoeba histolytica HM-1:IMSS
RepID=C4M3E3_ENTHI
Length = 1122
Score = 251 bits (641), Expect = 3e-65
Identities = 113/174 (64%), Positives = 142/174 (81%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
+G F+ GTAF GD+++D ++ L+ AGYSY GK+ YSG TG+ L AY+F GP++YQKLKH
Sbjct: 946 DGSFKYGTAFGGDKLDDMSKILIEAGYSYDGKEELYSGITGKALHAYIFIGPVYYQKLKH 1005
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV DKMHARARGP++ LTRQPTEGRSRDGGLRLGEMERDCLIGYGA+ LL+ERLM+SSD
Sbjct: 1006 MVLDKMHARARGPKSSLTRQPTEGRSRDGGLRLGEMERDCLIGYGATNLLLERLMYSSDA 1065
Query: 368 FTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
F V C CGL+G+ G+C++C + + + +PYACKLLFQE+Q MNVVPRL +
Sbjct: 1066 FKVCVCKKCGLIGHSGYCKFCESSLYCTNVTMPYACKLLFQEMQSMNVVPRLSI 1119
[68][TOP]
>UniRef100_Q6CLR1 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
RepID=Q6CLR1_KLULA
Length = 1142
Score = 251 bits (641), Expect = 3e-65
Identities = 121/178 (67%), Positives = 137/178 (76%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G GT F G ++ED ++ LV G++YSGKDM YSG TGE L+AY+F GPI+YQKL
Sbjct: 961 VLNGTLEYGTCFGGSKLEDMSKILVDNGFNYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1020
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS
Sbjct: 1021 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMLSS 1080
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C CGL+GY GWC C+T V + IPYA KLLFQEL MN+ PRLKL D
Sbjct: 1081 DAFEVDVCEKCGLMGYSGWCTSCKTAEHVVKMTIPYAAKLLFQELLAMNIAPRLKLGD 1138
[69][TOP]
>UniRef100_P22276 DNA-directed RNA polymerase III subunit RPC2 n=5 Tax=Saccharomyces
cerevisiae RepID=RPC2_YEAST
Length = 1149
Score = 250 bits (638), Expect = 6e-65
Identities = 118/178 (66%), Positives = 138/178 (77%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G GT F G ++ED ++ LV G++YSGKDM YSG TGE L+AY+F GPI+YQKL
Sbjct: 968 VLNGTLEYGTCFGGSKLEDMSKILVDQGFNYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1027
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS
Sbjct: 1028 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMISS 1087
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C CGL+GY GWC C++ + + IPYA KLLFQEL MN+ PRL+L+D
Sbjct: 1088 DAFEVDVCDKCGLMGYSGWCTTCKSAENIIKMTIPYAAKLLFQELLSMNIAPRLRLED 1145
[70][TOP]
>UniRef100_C5DEU3 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5DEU3_LACTC
Length = 1144
Score = 249 bits (636), Expect = 1e-64
Identities = 119/178 (66%), Positives = 137/178 (76%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G GT F G ++E+ ++ LV G++YSGKDM YSG TGE L+AY+F GPI+YQKL
Sbjct: 963 VLNGSLEYGTCFGGSKLENMSQILVNHGFNYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1022
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS
Sbjct: 1023 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMISS 1082
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C CGL+GY GWC C+ V + IPYA KLLFQEL MN+ PRLKL+D
Sbjct: 1083 DAFEVDVCNKCGLMGYSGWCTSCKGAENVIKMTIPYAAKLLFQELLSMNIAPRLKLED 1140
[71][TOP]
>UniRef100_B9WLY1 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
RepID=B9WLY1_CANDC
Length = 1157
Score = 249 bits (636), Expect = 1e-64
Identities = 119/178 (66%), Positives = 136/178 (76%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G GT F G ++ED ++ LV G+SYSGKDM YSG TGE L+AY+F GPI+YQKL
Sbjct: 978 VLNGSLEYGTCFGGSKLEDMSKILVEKGFSYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1037
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS
Sbjct: 1038 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMISS 1097
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C CGL+GY WC C++ V + IPYA KLLFQEL MN+ PRL+L D
Sbjct: 1098 DAFEVDVCNKCGLMGYNNWCTTCKSSENVIKMTIPYAAKLLFQELLSMNIAPRLRLGD 1155
[72][TOP]
>UniRef100_A7TQC8 DNA-directed RNA polymerase n=1 Tax=Vanderwaltozyma polyspora DSM
70294 RepID=A7TQC8_VANPO
Length = 1139
Score = 249 bits (636), Expect = 1e-64
Identities = 118/178 (66%), Positives = 137/178 (76%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G GT F G ++ED + LV G++YSGKDM YSG TGE L+AY+F GPI+YQKL
Sbjct: 958 VLNGSLEYGTCFGGSKLEDMSRILVDKGFNYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1017
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS
Sbjct: 1018 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMISS 1077
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C CGL+GY GWC C++ + + IPYA KLLFQEL MN+ PRL+L+D
Sbjct: 1078 DAFEVDVCDKCGLMGYSGWCSTCKSAEHNNKMTIPYAAKLLFQELLSMNIAPRLRLED 1135
[73][TOP]
>UniRef100_A3LP81 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
RepID=A3LP81_PICST
Length = 1155
Score = 249 bits (636), Expect = 1e-64
Identities = 120/178 (67%), Positives = 136/178 (76%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G GT F G ++ED ++ LV G+SYSGKDM YSG TGE L+AY+F GPI+YQKL
Sbjct: 976 VLNGSLEYGTCFGGSKLEDMSKILVEKGFSYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1035
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS
Sbjct: 1036 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMISS 1095
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C CGL+GY WC C++ V + IPYA KLLFQEL MN+ PRLKL D
Sbjct: 1096 DAFEVDVCNKCGLMGYNSWCTTCKSFEHVIKMTIPYAAKLLFQELLSMNIAPRLKLGD 1153
[74][TOP]
>UniRef100_Q59M52 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=Q59M52_CANAL
Length = 1157
Score = 249 bits (635), Expect = 1e-64
Identities = 118/178 (66%), Positives = 136/178 (76%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G GT F G ++ED ++ L+ G+SYSGKDM YSG TGE L+AY+F GPI+YQKL
Sbjct: 978 VLNGSLEYGTCFGGSKLEDMSKILIEKGFSYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1037
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS
Sbjct: 1038 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMISS 1097
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C CGL+GY WC C++ V + IPYA KLLFQEL MN+ PRL+L D
Sbjct: 1098 DAFEVDVCNKCGLMGYNSWCTTCKSSENVIKMTIPYAAKLLFQELLSMNIAPRLRLGD 1155
[75][TOP]
>UniRef100_A5E0Z1 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
RepID=A5E0Z1_LODEL
Length = 1157
Score = 248 bits (634), Expect = 2e-64
Identities = 118/178 (66%), Positives = 136/178 (76%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G GT F G ++ED ++ LV+ G+SYSGKDM YSG TGE L+AY+F GPI+YQKL
Sbjct: 978 VLNGSLEYGTCFGGSKLEDMSKILVSKGFSYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1037
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS
Sbjct: 1038 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMISS 1097
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C CGL+GY WC C+ + + IPYA KLLFQEL MN+ PRL+L D
Sbjct: 1098 DAFEVDVCNKCGLMGYNSWCTTCKGSENIIKMTIPYAAKLLFQELLSMNIAPRLRLGD 1155
[76][TOP]
>UniRef100_Q75B52 DNA-directed RNA polymerase n=1 Tax=Eremothecium gossypii
RepID=Q75B52_ASHGO
Length = 1141
Score = 248 bits (633), Expect = 2e-64
Identities = 119/178 (66%), Positives = 136/178 (76%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G GT F G ++ D +E LV G++YSGKDM Y G TGE L+AYVF GPI+YQKL
Sbjct: 960 VLNGTLEYGTCFGGSQLADMSEILVNNGFNYSGKDMLYFGITGECLQAYVFFGPIYYQKL 1019
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS
Sbjct: 1020 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMLSS 1079
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C CGL+GY GWC C++ + + IPYA KLLFQEL MN+ PRLKL+D
Sbjct: 1080 DAFEVDVCNKCGLMGYSGWCTSCKSAEHIIKMTIPYAAKLLFQELLSMNIAPRLKLED 1137
[77][TOP]
>UniRef100_C4Y486 DNA-directed RNA polymerase n=1 Tax=Clavispora lusitaniae ATCC 42720
RepID=C4Y486_CLAL4
Length = 1159
Score = 248 bits (633), Expect = 2e-64
Identities = 118/178 (66%), Positives = 136/178 (76%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G GT F G ++ED ++ LV G++YSGKDM YSG TGE L+AY+F GPI+YQKL
Sbjct: 980 VLNGTLEYGTCFGGSKLEDMSKILVDKGFNYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1039
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHAR+RGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS
Sbjct: 1040 KHMVLDKMHARSRGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMISS 1099
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C CGL+GY WC C++ V + IPYA KLLFQEL MN+ PRLKL D
Sbjct: 1100 DAFEVDVCNNCGLMGYSSWCSTCKSSEHVIKMTIPYAAKLLFQELLSMNIAPRLKLGD 1157
[78][TOP]
>UniRef100_A8PVW9 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
RepID=A8PVW9_MALGO
Length = 1131
Score = 248 bits (633), Expect = 2e-64
Identities = 121/178 (67%), Positives = 136/178 (76%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G GTAF G ++ED + LV GY Y GK+ SG TGEPL AYV+ GPI+YQKL
Sbjct: 952 VLRGTQEYGTAFGGSKVEDMSRILVEHGYHYGGKEYMTSGMTGEPLEAYVYFGPIYYQKL 1011
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGA+ LL+ERLM SS
Sbjct: 1012 KHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGATQLLLERLMVSS 1071
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V AC CGLLGY G+C YC++ V L +PYA KLLFQEL M VVPRL L++
Sbjct: 1072 DAFVVNACEECGLLGYNGYCGYCKSSKHVVKLTVPYATKLLFQELMAMQVVPRLVLEE 1129
[79][TOP]
>UniRef100_UPI00003BE866 hypothetical protein DEHA0G24574g n=1 Tax=Debaryomyces hansenii
CBS767 RepID=UPI00003BE866
Length = 1165
Score = 248 bits (632), Expect = 3e-64
Identities = 118/178 (66%), Positives = 135/178 (75%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G GT F G ++E+ + LV G+SYSGKDM YSG TGE L+AY+F GPI+YQKL
Sbjct: 986 VLNGSLEYGTCFGGSKLEEMSRTLVDKGFSYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1045
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS
Sbjct: 1046 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMLSS 1105
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C CGL+GY WC C++ + + IPYA KLLFQEL MN+ PRLKL D
Sbjct: 1106 DAFEVDICNQCGLMGYNSWCTSCKSSEYIIKMTIPYAAKLLFQELLSMNIAPRLKLGD 1163
[80][TOP]
>UniRef100_B5RUZ7 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
RepID=B5RUZ7_DEBHA
Length = 1165
Score = 248 bits (632), Expect = 3e-64
Identities = 118/178 (66%), Positives = 135/178 (75%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G GT F G ++E+ + LV G+SYSGKDM YSG TGE L+AY+F GPI+YQKL
Sbjct: 986 VLNGSLEYGTCFGGSKLEEMSRTLVDKGFSYSGKDMLYSGITGECLQAYIFFGPIYYQKL 1045
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS
Sbjct: 1046 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMLSS 1105
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C CGL+GY WC C++ + + IPYA KLLFQEL MN+ PRLKL D
Sbjct: 1106 DAFEVDICNQCGLMGYNSWCTSCKSSEYIIKMTIPYAAKLLFQELLSMNIAPRLKLGD 1163
[81][TOP]
>UniRef100_B6AC47 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
RepID=B6AC47_9CRYT
Length = 1219
Score = 247 bits (630), Expect = 5e-64
Identities = 113/175 (64%), Positives = 134/175 (76%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G +R GTAF G +ED A+ L+ G+ YSGK+ SG TGE + Y+F GPIFYQKL
Sbjct: 1043 VLDGNYRYGTAFGGTPVEDAAKCLIQNGFHYSGKEYLTSGITGEAIETYIFVGPIFYQKL 1102
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
+HMV DKMHAR RGPR +LTRQPTEGRS+DGGLRLGEMERDCL+ YGAS LL+ERLM +S
Sbjct: 1103 RHMVLDKMHARGRGPRQILTRQPTEGRSKDGGLRLGEMERDCLVAYGASNLLIERLMLNS 1162
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526
DVF Y C CGL GY +C YCR +S +++PYACKLLFQELQ MNV PR+K
Sbjct: 1163 DVFETYVCNKCGLFGYNNYCHYCRNSDDISIIRLPYACKLLFQELQAMNVCPRIK 1217
[82][TOP]
>UniRef100_C9ZHX4 DNA-directed RNA polymerase III, putative n=2 Tax=Trypanosoma brucei
RepID=C9ZHX4_TRYBG
Length = 1129
Score = 246 bits (627), Expect = 1e-63
Identities = 116/174 (66%), Positives = 135/174 (77%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
GKF GTAF GD+ ED E L+ GY+Y GKD+FYSG TGE LRAYVF GPI+YQ+LKHM
Sbjct: 951 GKFGDGTAFGGDKAEDLGEELIRHGYNYHGKDIFYSGVTGEMLRAYVFFGPIYYQRLKHM 1010
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V DKMHARA GPR++LTRQPTEGRSR GGLR+GEMERDC++GYGAS LL ERL+ SSD+F
Sbjct: 1011 VTDKMHARATGPRSMLTRQPTEGRSRSGGLRVGEMERDCMVGYGASNLLNERLLVSSDLF 1070
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
T+ C CG +GY G+C YC VS + +PYA KLL QELQGM + RL LD
Sbjct: 1071 TIDICRCCGFMGYNGYCSYCNAKNTVSRVNVPYAFKLLLQELQGMGISTRLSLD 1124
[83][TOP]
>UniRef100_C5M3E6 DNA-directed RNA polymerase n=1 Tax=Candida tropicalis MYA-3404
RepID=C5M3E6_CANTT
Length = 1159
Score = 246 bits (627), Expect = 1e-63
Identities = 118/178 (66%), Positives = 135/178 (75%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G GT F G ++ED ++ LV G+SYSGKDM SG TGE L+AY+F GPI+YQKL
Sbjct: 980 VLNGSLEYGTCFGGSKLEDMSKILVEKGFSYSGKDMLQSGITGECLQAYIFFGPIYYQKL 1039
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDC+I YGAS LL+ERLM SS
Sbjct: 1040 KHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMISS 1099
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C CGL+GY WC C++ V + IPYA KLLFQEL MN+ PRL+L D
Sbjct: 1100 DAFEVDVCNKCGLMGYNNWCTTCQSSENVIKMTIPYAAKLLFQELLSMNIAPRLRLGD 1157
[84][TOP]
>UniRef100_C4R793 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4R793_PICPG
Length = 1158
Score = 246 bits (627), Expect = 1e-63
Identities = 114/178 (64%), Positives = 138/178 (77%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G + GT F G +++ ++ L+ G+SYSGKD YSG TGE L+AY+F GPI+YQKL
Sbjct: 979 VLDGSLQYGTCFGGSDLKEMSQILIDKGFSYSGKDQLYSGITGECLQAYIFFGPIYYQKL 1038
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHAR+RGPRA+LTRQPTEGRSRDGGLRLGEMERDC++ YGAS LL+ERLM SS
Sbjct: 1039 KHMVLDKMHARSRGPRAVLTRQPTEGRSRDGGLRLGEMERDCVVAYGASQLLLERLMISS 1098
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F V C TCGL+GY GWC C++ + + IPYA KLLFQEL MN+ PRL+L D
Sbjct: 1099 DAFEVDVCNTCGLMGYNGWCPTCKSSEFIIKMTIPYAAKLLFQELVSMNIAPRLELGD 1156
[85][TOP]
>UniRef100_A8WJV6 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae AF16
RepID=A8WJV6_CAEBR
Length = 1160
Score = 245 bits (626), Expect = 1e-63
Identities = 122/199 (61%), Positives = 142/199 (71%), Gaps = 23/199 (11%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G + GTAF GD+++D E L A GY+Y GKDM SG TG+PL AY++ GPI+YQKL
Sbjct: 957 VMNGTYHYGTAFGGDQVKDVCEELAARGYNYMGKDMLTSGITGQPLSAYIYFGPIYYQKL 1016
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHARARGPRA LTRQPTEGRSR+GGLRLGEMERDCLI YGASMLL+ERLM SS
Sbjct: 1017 KHMVLDKMHARARGPRAALTRQPTEGRSREGGLRLGEMERDCLIAYGASMLLIERLMVSS 1076
Query: 362 DVFTVY-----------------------ACGTCGLLGYKGWCQYCRTGAAVSALQIPYA 472
D F V C CG++G KGWCQ CR+ +++ ++IPYA
Sbjct: 1077 DEFKVLFRSFVPLIPIEVFFVRRCFQCVDVCTGCGVIGSKGWCQKCRSSKSMANIKIPYA 1136
Query: 473 CKLLFQELQGMNVVPRLKL 529
CKLLFQELQ MN+VPRL L
Sbjct: 1137 CKLLFQELQSMNIVPRLDL 1155
[86][TOP]
>UniRef100_Q4PBR7 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis
RepID=Q4PBR7_USTMA
Length = 1169
Score = 245 bits (626), Expect = 1e-63
Identities = 116/175 (66%), Positives = 137/175 (78%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G + GTAF G ++ED + LV GY+Y+GK+ SG TG+PL YV+ GPI+YQ+LKHM
Sbjct: 993 GTLQYGTAFGGSKVEDMSALLVENGYNYAGKETLTSGITGQPLECYVYFGPIYYQRLKHM 1052
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V+DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGA+ LL+ERLM SSD F
Sbjct: 1053 VQDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGATQLLLERLMISSDAF 1112
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
TV+AC CGL+GY G+C YC + V L IPY KL+ QEL M VVPRL L+D
Sbjct: 1113 TVHACQKCGLMGYNGFCPYCSSSKHVVQLTIPYGTKLMLQELMAMQVVPRLVLED 1167
[87][TOP]
>UniRef100_B9Q403 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii VEG
RepID=B9Q403_TOXGO
Length = 1324
Score = 245 bits (625), Expect = 2e-63
Identities = 114/175 (65%), Positives = 137/175 (78%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G + GTAF G +E E L A G+ YSGK+ SG TGE L+ YVFAGPI+YQKLKHM
Sbjct: 1149 GACQYGTAFGGVGVETLGEILAAHGFHYSGKEYLTSGITGEALQTYVFAGPIYYQKLKHM 1208
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V+DK+HAR RGPR LLTRQPTEGR+++GGLRLGEMERDCL+ YG+S LLMERLM SSDVF
Sbjct: 1209 VQDKIHARGRGPRQLLTRQPTEGRAKEGGLRLGEMERDCLVAYGSSALLMERLMLSSDVF 1268
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
C TCGL+GY+GWC YC++G V+ +++PYACKLLFQEL MNV PRL + +
Sbjct: 1269 EASVCSTCGLMGYEGWCPYCKSGKHVAPIRMPYACKLLFQELMSMNVCPRLHIKE 1323
[88][TOP]
>UniRef100_B9PFT5 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii GT1
RepID=B9PFT5_TOXGO
Length = 1328
Score = 245 bits (625), Expect = 2e-63
Identities = 114/175 (65%), Positives = 137/175 (78%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G + GTAF G +E E L A G+ YSGK+ SG TGE L+ YVFAGPI+YQKLKHM
Sbjct: 1153 GACQYGTAFGGVGVETLGEILAAHGFHYSGKEYLTSGITGEALQTYVFAGPIYYQKLKHM 1212
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V+DK+HAR RGPR LLTRQPTEGR+++GGLRLGEMERDCL+ YG+S LLMERLM SSDVF
Sbjct: 1213 VQDKIHARGRGPRQLLTRQPTEGRAKEGGLRLGEMERDCLVAYGSSALLMERLMLSSDVF 1272
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
C TCGL+GY+GWC YC++G V+ +++PYACKLLFQEL MNV PRL + +
Sbjct: 1273 EASVCSTCGLMGYEGWCPYCKSGKHVAPIRMPYACKLLFQELMSMNVCPRLHIKE 1327
[89][TOP]
>UniRef100_B6KDI3 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii ME49
RepID=B6KDI3_TOXGO
Length = 1332
Score = 245 bits (625), Expect = 2e-63
Identities = 114/175 (65%), Positives = 137/175 (78%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G + GTAF G +E E L A G+ YSGK+ SG TGE L+ YVFAGPI+YQKLKHM
Sbjct: 1157 GACQYGTAFGGVGVETLGEILAAHGFHYSGKEYLTSGITGEALQTYVFAGPIYYQKLKHM 1216
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V+DK+HAR RGPR LLTRQPTEGR+++GGLRLGEMERDCL+ YG+S LLMERLM SSDVF
Sbjct: 1217 VQDKIHARGRGPRQLLTRQPTEGRAKEGGLRLGEMERDCLVAYGSSALLMERLMLSSDVF 1276
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
C TCGL+GY+GWC YC++G V+ +++PYACKLLFQEL MNV PRL + +
Sbjct: 1277 EASVCSTCGLMGYEGWCPYCKSGKHVAPIRMPYACKLLFQELMSMNVCPRLHIKE 1331
[90][TOP]
>UniRef100_Q5KC33 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q5KC33_CRYNE
Length = 1129
Score = 244 bits (622), Expect = 4e-63
Identities = 113/175 (64%), Positives = 135/175 (77%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
GK + GTAF G ++ D ++ L+ G+SY GKDM SG TG+P+ AYV+ GPI+YQKLKHM
Sbjct: 953 GKLQYGTAFGGSKVVDMSQILIDNGFSYGGKDMLTSGITGQPMEAYVYFGPIYYQKLKHM 1012
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V DKMHAR GPRA LTRQPTEGRS+DGGLRLGEMERDCLIGYGA+ LL+ERLM SSD F
Sbjct: 1013 VMDKMHARPTGPRANLTRQPTEGRSKDGGLRLGEMERDCLIGYGATQLLLERLMISSDAF 1072
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
C +CG+LGY WC C++G V L IPYA KLL QEL GMN++P+L L+D
Sbjct: 1073 ETQVCESCGMLGYNNWCPKCKSGKGVVGLTIPYAAKLLIQELMGMNIMPKLCLED 1127
[91][TOP]
>UniRef100_Q5CPZ8 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium parvum Iowa II
RepID=Q5CPZ8_CRYPV
Length = 1287
Score = 243 bits (620), Expect = 7e-63
Identities = 112/175 (64%), Positives = 136/175 (77%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G +R GTAF G +E+ A+ LV G+ YSGK+ SG+TGE + AY+F GPI+YQKL
Sbjct: 1109 VLDGNYRYGTAFGGTPLEESAKCLVEHGFHYSGKEYLTSGTTGEAIEAYIFVGPIYYQKL 1168
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHAR RGPR +LTRQPTEGRS+DGGLRLGEMERDCL+ YGAS LL+ERLM +S
Sbjct: 1169 KHMVLDKMHARGRGPRQILTRQPTEGRSKDGGLRLGEMERDCLVAYGASNLLIERLMLNS 1228
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526
DVF C CGL GY +C YC++ VS +++PYACKLLFQELQ MNV PR++
Sbjct: 1229 DVFETNVCNQCGLFGYNNYCHYCKSSQDVSIIRLPYACKLLFQELQAMNVCPRIR 1283
[92][TOP]
>UniRef100_C5JTE0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis SLH14081
RepID=C5JTE0_AJEDS
Length = 1204
Score = 241 bits (615), Expect = 3e-62
Identities = 119/175 (68%), Positives = 133/175 (76%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G+F GTAF G +E+ + LV G+SY GKD SG TGEPL AYVF GPI+YQKLKHM
Sbjct: 1022 GQFGYGTAFGGSPVEEMSAILVDHGFSYGGKDYLTSGITGEPLPAYVFMGPIYYQKLKHM 1081
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD
Sbjct: 1082 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1141
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
V C +CG +GY GWCQ C+T V + IPYA KLL QEL MNVV RLKL D
Sbjct: 1142 EVDVCESCGFMGYLGWCQRCKTSRGVVKMVIPYAAKLLVQELFSMNVVARLKLAD 1196
[93][TOP]
>UniRef100_C5GKN6 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis ER-3
RepID=C5GKN6_AJEDR
Length = 1228
Score = 241 bits (615), Expect = 3e-62
Identities = 119/175 (68%), Positives = 133/175 (76%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G+F GTAF G +E+ + LV G+SY GKD SG TGEPL AYVF GPI+YQKLKHM
Sbjct: 1046 GQFGYGTAFGGSPVEEMSAILVDHGFSYGGKDYLTSGITGEPLPAYVFMGPIYYQKLKHM 1105
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD
Sbjct: 1106 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1165
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
V C +CG +GY GWCQ C+T V + IPYA KLL QEL MNVV RLKL D
Sbjct: 1166 EVDVCESCGFMGYLGWCQRCKTSRGVVKMVIPYAAKLLVQELFSMNVVARLKLAD 1220
[94][TOP]
>UniRef100_A6R9I0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
RepID=A6R9I0_AJECN
Length = 1186
Score = 241 bits (615), Expect = 3e-62
Identities = 119/175 (68%), Positives = 132/175 (75%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G+F GTAF G +E+ + LV G+SY GKD SG TGEPL AYVF GPI+YQKLKHM
Sbjct: 1004 GQFGYGTAFGGSPVEEMSAILVDHGFSYGGKDYLTSGITGEPLPAYVFMGPIYYQKLKHM 1063
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD
Sbjct: 1064 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1123
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
V C CG +GY GWCQ C+T V + IPYA KLL QEL MNVV RLKL D
Sbjct: 1124 EVDVCENCGFMGYLGWCQRCKTSRGVVKMAIPYAAKLLVQELFSMNVVARLKLAD 1178
[95][TOP]
>UniRef100_A4RS40 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4RS40_OSTLU
Length = 1146
Score = 241 bits (614), Expect = 4e-62
Identities = 116/184 (63%), Positives = 137/184 (74%), Gaps = 6/184 (3%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
+ G+F GTAF GD +E + LV +GYSY GKDM + G TGE L VF GP++YQKL
Sbjct: 962 LESGRFHDGTAFGGDTVEAIQQTLVESGYSYKGKDMLHCGITGEALEVNVFMGPVYYQKL 1021
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DKMHARARGPR +LTRQPTEGR+RDGGLRLGEMERDCLIGYGAS L++ERLM SS
Sbjct: 1022 KHMVQDKMHARARGPRVVLTRQPTEGRARDGGLRLGEMERDCLIGYGASQLILERLMISS 1081
Query: 362 DVFTVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
D F C CGLLG+ + C C+T A V+ L++PYACKLLFQELQ MN+ PRL
Sbjct: 1082 DQFEAQVCTKCGLLGFQHHITRRNACTLCKTEAEVATLKLPYACKLLFQELQSMNIAPRL 1141
Query: 524 KLDD 535
L +
Sbjct: 1142 SLTE 1145
[96][TOP]
>UniRef100_C6HGH3 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus H143
RepID=C6HGH3_AJECH
Length = 1227
Score = 241 bits (614), Expect = 4e-62
Identities = 119/175 (68%), Positives = 132/175 (75%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G+F GTAF G +E+ + LV G+SY GKD SG TGEPL AYVF GPI+YQKLKHM
Sbjct: 1045 GQFGYGTAFGGSPVEEMSAILVDHGFSYGGKDYLTSGITGEPLPAYVFMGPIYYQKLKHM 1104
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD
Sbjct: 1105 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1164
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
V C CG +GY GWCQ C+T V + IPYA KLL QEL MNVV RLKL D
Sbjct: 1165 EVDVCENCGFMGYLGWCQRCKTSRGVVKMVIPYAAKLLVQELFSMNVVARLKLAD 1219
[97][TOP]
>UniRef100_C0P0A1 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
RepID=C0P0A1_AJECG
Length = 1227
Score = 241 bits (614), Expect = 4e-62
Identities = 119/175 (68%), Positives = 132/175 (75%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G+F GTAF G +E+ + LV G+SY GKD SG TGEPL AYVF GPI+YQKLKHM
Sbjct: 1045 GQFGYGTAFGGSPVEEMSAILVDHGFSYGGKDYLTSGITGEPLPAYVFMGPIYYQKLKHM 1104
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD
Sbjct: 1105 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1164
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
V C CG +GY GWCQ C+T V + IPYA KLL QEL MNVV RLKL D
Sbjct: 1165 EVDVCENCGFMGYLGWCQRCKTSRGVVKMVIPYAAKLLVQELFSMNVVARLKLAD 1219
[98][TOP]
>UniRef100_C1N4K3 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N4K3_9CHLO
Length = 1197
Score = 240 bits (612), Expect = 6e-62
Identities = 120/182 (65%), Positives = 136/182 (74%), Gaps = 6/182 (3%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
+G+F GTAF GD ED LV G+SY+GKD+ + G TGEPL AY+F GP++YQKLKH
Sbjct: 1016 DGRFHDGTAFAGDTAEDIGATLVNHGFSYNGKDLLHCGITGEPLVAYIFMGPVYYQKLKH 1075
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV DKMHARARGPR +LTRQPTEGR+RDGGLRLGEMERDCLIGYGAS L++ERLM SSD
Sbjct: 1076 MVLDKMHARARGPRVVLTRQPTEGRARDGGLRLGEMERDCLIGYGASALILERLMISSDQ 1135
Query: 368 FTVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
F C CGLL Y K C C A VSAL++PYACKLLFQELQ MN+ PRL L
Sbjct: 1136 FEAQVCNKCGLLAYRHHGTGKDACAQCE-DADVSALKLPYACKLLFQELQSMNICPRLTL 1194
Query: 530 DD 535
D
Sbjct: 1195 SD 1196
[99][TOP]
>UniRef100_C4JMP0 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704
RepID=C4JMP0_UNCRE
Length = 1202
Score = 240 bits (612), Expect = 6e-62
Identities = 118/178 (66%), Positives = 132/178 (74%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G+F GT F G +E+ + LV+ G+SY GKD SG TGEPL AYVF GPI+YQKL
Sbjct: 1017 VLSGQFGYGTPFGGSPVEEMSAILVSKGFSYGGKDYLTSGITGEPLPAYVFTGPIYYQKL 1076
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SS
Sbjct: 1077 KHMVQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISS 1136
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D V C CG +GY GWCQ C+T V + IPYA KLL QEL MNVV R KL D
Sbjct: 1137 DRHEVDVCENCGFMGYLGWCQRCKTSRGVVKMAIPYAAKLLVQELFSMNVVARFKLAD 1194
[100][TOP]
>UniRef100_C1HBD0 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb01 RepID=C1HBD0_PARBA
Length = 1205
Score = 239 bits (611), Expect = 8e-62
Identities = 117/175 (66%), Positives = 133/175 (76%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G+F GTAF G +E+ + LV G+SY GKD SG TGE L AYVF GPI+YQKLKHM
Sbjct: 1023 GQFSYGTAFGGSPVEEMSAILVKHGFSYGGKDCLTSGITGESLPAYVFMGPIYYQKLKHM 1082
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD +
Sbjct: 1083 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDQY 1142
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
V C +CG +GY GWCQ C++ V + IPYA KLL QEL MNVV RLKL D
Sbjct: 1143 EVDVCESCGFMGYSGWCQRCKSSRGVVKMIIPYAAKLLVQELFSMNVVARLKLAD 1197
[101][TOP]
>UniRef100_A7EEL3 DNA-directed RNA polymerase n=1 Tax=Sclerotinia sclerotiorum 1980
UF-70 RepID=A7EEL3_SCLS1
Length = 1230
Score = 239 bits (610), Expect = 1e-61
Identities = 115/178 (64%), Positives = 134/178 (75%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G GT F G ++ + L+ G+SYSGKD SG TGE L AYVF GPI+YQKL
Sbjct: 1043 VVNGSLEYGTCFGGSNVDVMGKILIDKGFSYSGKDFVTSGITGESLPAYVFFGPIYYQKL 1102
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DKMH+R+RGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YGAS LL+ERLM SS
Sbjct: 1103 KHMVQDKMHSRSRGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGASQLLLERLMLSS 1162
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D V C TCGL+GY GWCQ C++ VS + +PYA KLL QE+ MNV+ RLKL+D
Sbjct: 1163 DAHEVDICETCGLMGYSGWCQTCKSSKGVSTMTMPYAAKLLVQEMLSMNVLVRLKLED 1220
[102][TOP]
>UniRef100_A6RTM2 DNA-directed RNA polymerase n=1 Tax=Botryotinia fuckeliana B05.10
RepID=A6RTM2_BOTFB
Length = 450
Score = 239 bits (610), Expect = 1e-61
Identities = 115/178 (64%), Positives = 134/178 (75%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G GT F G ++ + L+ G+SYSGKD SG TGE L AYVF GPI+YQKL
Sbjct: 263 VINGSLEYGTCFGGSNVDVMGQILIDNGFSYSGKDFVTSGITGESLPAYVFFGPIYYQKL 322
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DKMH+R+RGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YGAS LL+ERLM SS
Sbjct: 323 KHMVQDKMHSRSRGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGASQLLLERLMLSS 382
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D V C TCGL+GY GWCQ C++ VS + +PYA KLL QE+ MNV+ RLKL+D
Sbjct: 383 DAHQVDICETCGLMGYSGWCQTCKSSKGVSTMTMPYAAKLLVQEMLSMNVLVRLKLED 440
[103][TOP]
>UniRef100_Q84R88 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q84R88_ORYSJ
Length = 1174
Score = 238 bits (608), Expect = 2e-61
Identities = 117/186 (62%), Positives = 139/186 (74%), Gaps = 11/186 (5%)
Frame = +2
Query: 11 GKFRMGTAF-----DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQ 175
G+F G+AF + D++ED + LV G+SY+GKD+ YSG G P +AYVF GPI+YQ
Sbjct: 988 GQFHYGSAFGEPSGNADKVEDISRTLVKHGFSYNGKDLLYSGILGHPCQAYVFMGPIYYQ 1047
Query: 176 KLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMH 355
KLKHMV DKMHARA GPR LLTRQPTEGRSRDGGLRLGEMERDCLI YGASML+ ERL+
Sbjct: 1048 KLKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLLI 1107
Query: 356 SSDVFTVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVP 517
SSD + V C CGLLGY +C C+ G ++ +++PYACKLLFQELQ MNVVP
Sbjct: 1108 SSDPYQVQVCRKCGLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQELQAMNVVP 1167
Query: 518 RLKLDD 535
RLKL +
Sbjct: 1168 RLKLTE 1173
[104][TOP]
>UniRef100_Q10JZ3 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q10JZ3_ORYSJ
Length = 1155
Score = 238 bits (608), Expect = 2e-61
Identities = 117/186 (62%), Positives = 139/186 (74%), Gaps = 11/186 (5%)
Frame = +2
Query: 11 GKFRMGTAF-----DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQ 175
G+F G+AF + D++ED + LV G+SY+GKD+ YSG G P +AYVF GPI+YQ
Sbjct: 969 GQFHYGSAFGEPSGNADKVEDISRTLVKHGFSYNGKDLLYSGILGHPCQAYVFMGPIYYQ 1028
Query: 176 KLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMH 355
KLKHMV DKMHARA GPR LLTRQPTEGRSRDGGLRLGEMERDCLI YGASML+ ERL+
Sbjct: 1029 KLKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLLI 1088
Query: 356 SSDVFTVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVP 517
SSD + V C CGLLGY +C C+ G ++ +++PYACKLLFQELQ MNVVP
Sbjct: 1089 SSDPYQVQVCRKCGLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQELQAMNVVP 1148
Query: 518 RLKLDD 535
RLKL +
Sbjct: 1149 RLKLTE 1154
[105][TOP]
>UniRef100_Q1DTS7 DNA-directed RNA polymerase n=2 Tax=Coccidioides RepID=Q1DTS7_COCIM
Length = 1233
Score = 238 bits (607), Expect = 2e-61
Identities = 116/175 (66%), Positives = 132/175 (75%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G+F GTAF G +E+ + L++ G++Y GKD SG TGE L AYVF GPI+YQKLKHM
Sbjct: 1051 GQFGYGTAFGGSPVEEMSAILISKGFNYGGKDYLTSGITGEALPAYVFTGPIYYQKLKHM 1110
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD
Sbjct: 1111 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1170
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
V C CG +GY GWCQ C+T V + IPYA KLL QEL MNVV RLKL D
Sbjct: 1171 EVDVCENCGFMGYLGWCQRCKTSRGVVKMVIPYAAKLLVQELFSMNVVARLKLAD 1225
[106][TOP]
>UniRef100_C5FVS4 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
RepID=C5FVS4_NANOT
Length = 1211
Score = 238 bits (606), Expect = 3e-61
Identities = 117/175 (66%), Positives = 130/175 (74%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G+F GT F G +E+ + LV G+SY GKD SG TGEPL YVF GPI+YQKLKHM
Sbjct: 1029 GQFGYGTPFGGSPVEEMSAILVDHGFSYGGKDYLTSGITGEPLTYYVFTGPIYYQKLKHM 1088
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V+DKMH+RARGPRA LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD
Sbjct: 1089 VQDKMHSRARGPRATLTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1148
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
V C CG +GY GWCQ C+T A V + IPYA KLL QEL MNVV RL+L D
Sbjct: 1149 EVDVCEGCGFMGYSGWCQRCKTSAGVVKMVIPYAAKLLVQELFSMNVVARLRLQD 1203
[107][TOP]
>UniRef100_A9RNX6 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9RNX6_PHYPA
Length = 1135
Score = 237 bits (605), Expect = 4e-61
Identities = 114/187 (60%), Positives = 139/187 (74%), Gaps = 11/187 (5%)
Frame = +2
Query: 2 VHEGKFRMGTAFD-----GDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPI 166
+H GKF G+AF D++ + LV G+SYSGKD YSG TG PL+AY+F GPI
Sbjct: 946 LHNGKFHYGSAFGEPSGHADKVSTISATLVKHGFSYSGKDFIYSGITGSPLQAYIFMGPI 1005
Query: 167 FYQKLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMER 346
+YQKLKHMV DKMHARARGPR +LTRQPTEGRSR+GGLRLGEMERDCLI YGASM+++ER
Sbjct: 1006 YYQKLKHMVLDKMHARARGPRVVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMMILER 1065
Query: 347 LMHSSDVFTVYACGTCGLLGYKG------WCQYCRTGAAVSALQIPYACKLLFQELQGMN 508
LM SSD F + C CG++GY C C++G ++ +++PYACKLLFQELQ MN
Sbjct: 1066 LMISSDQFQIQVCTKCGMIGYYHHKLKICLCSTCKSGDNIATMKLPYACKLLFQELQSMN 1125
Query: 509 VVPRLKL 529
+VPRL L
Sbjct: 1126 IVPRLTL 1132
[108][TOP]
>UniRef100_Q4DWA6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Trypanosoma cruzi
RepID=Q4DWA6_TRYCR
Length = 382
Score = 237 bits (604), Expect = 5e-61
Identities = 114/174 (65%), Positives = 134/174 (77%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G F GTAF GD ED L+ G++Y GKD+FYSG TGE ++AYVF GPI+YQ+LKHM
Sbjct: 204 GTFGDGTAFGGDNAEDLGMHLLRNGFNYHGKDVFYSGITGEIMQAYVFFGPIYYQRLKHM 263
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V DKMHARA GPR++LTRQPTEGRSR GGLR+GEMERDC++GYGAS LL ERL+ SSD+F
Sbjct: 264 VTDKMHARATGPRSMLTRQPTEGRSRSGGLRVGEMERDCMVGYGASNLLNERLLLSSDLF 323
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
TV C +CG LGY G+C YC T VS + +PYA KLL QELQGM + RL LD
Sbjct: 324 TVDTCRSCGFLGYCGYCPYCNTKNTVSHVNVPYAFKLLLQELQGMGISTRLSLD 377
[109][TOP]
>UniRef100_UPI0001985A70 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001985A70
Length = 1142
Score = 236 bits (603), Expect = 7e-61
Identities = 117/186 (62%), Positives = 138/186 (74%), Gaps = 11/186 (5%)
Frame = +2
Query: 11 GKFRMGTAFD-----GDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQ 175
G+F G+AF D++E ++ LV G+SYSGKD YSG TG PL+AY+F GPI+YQ
Sbjct: 956 GRFHYGSAFGEPSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQ 1015
Query: 176 KLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMH 355
KLKHMV DKMHAR GPR +LTRQPTEGR+R+GGLR+GEMERDCLI YGASML+ ERLM
Sbjct: 1016 KLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMV 1075
Query: 356 SSDVFTVYACGTCGLLGYK------GWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVP 517
SSD F V C CGLLGY G C C+ G +S +++PYACKLLFQELQ MNVVP
Sbjct: 1076 SSDPFEVQVCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVP 1135
Query: 518 RLKLDD 535
RLKL +
Sbjct: 1136 RLKLTE 1141
[110][TOP]
>UniRef100_A7QMF0 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7QMF0_VITVI
Length = 1146
Score = 236 bits (603), Expect = 7e-61
Identities = 117/186 (62%), Positives = 138/186 (74%), Gaps = 11/186 (5%)
Frame = +2
Query: 11 GKFRMGTAFD-----GDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQ 175
G+F G+AF D++E ++ LV G+SYSGKD YSG TG PL+AY+F GPI+YQ
Sbjct: 960 GRFHYGSAFGEPSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQ 1019
Query: 176 KLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMH 355
KLKHMV DKMHAR GPR +LTRQPTEGR+R+GGLR+GEMERDCLI YGASML+ ERLM
Sbjct: 1020 KLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMV 1079
Query: 356 SSDVFTVYACGTCGLLGYK------GWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVP 517
SSD F V C CGLLGY G C C+ G +S +++PYACKLLFQELQ MNVVP
Sbjct: 1080 SSDPFEVQVCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVP 1139
Query: 518 RLKLDD 535
RLKL +
Sbjct: 1140 RLKLTE 1145
[111][TOP]
>UniRef100_C5Z6F6 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5Z6F6_SORBI
Length = 1137
Score = 236 bits (602), Expect = 9e-61
Identities = 115/186 (61%), Positives = 136/186 (73%), Gaps = 11/186 (5%)
Frame = +2
Query: 11 GKFRMGTAF-----DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQ 175
G+F G+AF + D + D + L+ G+SY+GKD YSG G+PL AY+F GPI+YQ
Sbjct: 951 GRFHYGSAFGEPSGNADNVADISSTLIKHGFSYNGKDFLYSGILGQPLEAYIFMGPIYYQ 1010
Query: 176 KLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMH 355
KLKHMV DKMHARA GPR LLTRQPTEGRSRDGGLRLGEMERDCLI YGASML+ ERLM
Sbjct: 1011 KLKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLML 1070
Query: 356 SSDVFTVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVP 517
SSD + V C CGLLGY +C C+ G ++ +++PYACKLLFQEL MNVVP
Sbjct: 1071 SSDPYQVQVCRKCGLLGYYNHKLKTSYCSMCKNGENMAKMRLPYACKLLFQELHAMNVVP 1130
Query: 518 RLKLDD 535
RLKL +
Sbjct: 1131 RLKLTE 1136
[112][TOP]
>UniRef100_Q4D9P5 DNA-directed RNA polymerase n=1 Tax=Trypanosoma cruzi
RepID=Q4D9P5_TRYCR
Length = 1130
Score = 236 bits (602), Expect = 9e-61
Identities = 114/174 (65%), Positives = 133/174 (76%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G F GTAF GD ED L+ G++Y GKD FYSG TGE ++AYVF GPI+YQ+LKHM
Sbjct: 952 GTFGDGTAFGGDNAEDLGMHLLRNGFNYHGKDAFYSGITGEIMQAYVFFGPIYYQRLKHM 1011
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V DKMHARA GPR++LTRQPTEGRSR GGLR+GEMERDC++GYGAS LL ERL+ SSD+F
Sbjct: 1012 VTDKMHARATGPRSMLTRQPTEGRSRSGGLRVGEMERDCMVGYGASNLLNERLLLSSDLF 1071
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
TV C +CG LGY G+C YC T VS + +PYA KLL QELQGM + RL LD
Sbjct: 1072 TVDTCRSCGFLGYCGYCPYCNTKNTVSHVNVPYAFKLLLQELQGMGISTRLSLD 1125
[113][TOP]
>UniRef100_UPI00005DC295 NRPC2; DNA binding / DNA-directed RNA polymerase/ ribonucleoside
binding n=1 Tax=Arabidopsis thaliana RepID=UPI00005DC295
Length = 1161
Score = 234 bits (596), Expect = 4e-60
Identities = 113/186 (60%), Positives = 138/186 (74%), Gaps = 11/186 (5%)
Frame = +2
Query: 11 GKFRMGTAFD-----GDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQ 175
G+F G+AF D++E + LV G+SYSGKD+ YSG +GEP+ AY+F GPI+YQ
Sbjct: 975 GRFHYGSAFGERSGHADKVETISATLVEKGFSYSGKDLLYSGISGEPVEAYIFMGPIYYQ 1034
Query: 176 KLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMH 355
KLKHMV DKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGASML+ ERLM
Sbjct: 1035 KLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYERLMI 1094
Query: 356 SSDVFTVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVP 517
SSD F V C CGLLGY K C C+ G ++ +++PYACKLLFQELQ MNVVP
Sbjct: 1095 SSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQELQSMNVVP 1154
Query: 518 RLKLDD 535
RLKL +
Sbjct: 1155 RLKLTE 1160
[114][TOP]
>UniRef100_A2E3T5 DNA-directed RNA polymerase n=1 Tax=Trichomonas vaginalis G3
RepID=A2E3T5_TRIVA
Length = 1142
Score = 234 bits (596), Expect = 4e-60
Identities = 106/175 (60%), Positives = 134/175 (76%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G+ GTAF DR++D A+ L+AAGYSYSGKDM SG TGEPL AY+F GP+FYQ LKHM
Sbjct: 967 GRIGNGTAFSSDRVKDIADDLIAAGYSYSGKDMLMSGITGEPLYAYIFFGPVFYQSLKHM 1026
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
VKDKM ARA G LTRQPT+GRSR GG+RLGEMERDCLIGYGA+ +L ER++ SSDV+
Sbjct: 1027 VKDKMQARATGQVQYLTRQPTQGRSRQGGMRLGEMERDCLIGYGAASILYERMLISSDVY 1086
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
C CG +GY+G+C +C+T + +++PYACKLLF EL M + P+++L+D
Sbjct: 1087 EANVCAKCGFIGYEGYCTHCKTKEYMKIVRMPYACKLLFYELMAMGIAPKVRLED 1141
[115][TOP]
>UniRef100_UPI000186CFA7 DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide,
putative n=1 Tax=Pediculus humanus corporis
RepID=UPI000186CFA7
Length = 1137
Score = 233 bits (595), Expect = 6e-60
Identities = 106/173 (61%), Positives = 131/173 (75%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
GK GTAF G + + E LV ++Y GKD+ YSG TGEP+ YV++GP+FYQ+LKHM
Sbjct: 959 GKHHYGTAFGGSTVSEVQEELVKNKFNYEGKDILYSGITGEPMEVYVYSGPVFYQRLKHM 1018
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V+DK+HARARGPRA+LTRQPTEGR+ DGGLRLGEMERDCLI YGAS ++ ERLM SSD F
Sbjct: 1019 VQDKIHARARGPRAVLTRQPTEGRAADGGLRLGEMERDCLIAYGASSMISERLMISSDAF 1078
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
C CGL+ Y WC C++ +S +++PYA KLLFQEL+ MN+VPRL L
Sbjct: 1079 QCDVCNECGLIAYSKWCHGCKSSKEISTIKLPYATKLLFQELRSMNIVPRLSL 1131
[116][TOP]
>UniRef100_UPI00017918AB PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2
(RNA polymerase III subunit C2) (DNA-directed RNA
polymerase III subunit B) (DNA-directed RNA polymerase
III 127.6 kDa polypeptide) (C128) n=1 Tax=Acyrthosiphon
pisum RepID=UPI00017918AB
Length = 1112
Score = 233 bits (595), Expect = 6e-60
Identities = 106/176 (60%), Positives = 134/176 (76%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V EGKF+ G+AF G + D + L Y+Y GKD+ Y G G P+ AY+++GP+FYQ+L
Sbjct: 932 VLEGKFQDGSAFGGATVTDISNELQKHNYNYLGKDVLYCGIDGRPMEAYIYSGPVFYQRL 991
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DK+HAR+RGPR LLTRQPTEGRS+DGGLR+GEMERDCLI YGASML++ERLM SS
Sbjct: 992 KHMVADKIHARSRGPRVLLTRQPTEGRSKDGGLRMGEMERDCLIAYGASMLIIERLMLSS 1051
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
DV + C CGL Y GWC C+ +V +++PYACKLLFQELQ M++VP++ L
Sbjct: 1052 DVVEMDVCKLCGLFSYSGWCHMCQKSNSVCRIKMPYACKLLFQELQAMSIVPKISL 1107
[117][TOP]
>UniRef100_B9SHS2 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9SHS2_RICCO
Length = 1139
Score = 233 bits (595), Expect = 6e-60
Identities = 115/184 (62%), Positives = 136/184 (73%), Gaps = 11/184 (5%)
Frame = +2
Query: 11 GKFRMGTAFD-----GDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQ 175
G+F G+AF D +E +E LV G+SY+GKD+ YSG TG PL+AY+F GPI+YQ
Sbjct: 953 GRFHYGSAFGEPSGHADTVEAISETLVNRGFSYNGKDIIYSGITGCPLQAYIFMGPIYYQ 1012
Query: 176 KLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMH 355
KLKHMV DKMHAR GPR +LTRQPTEGR+R+GGLR+GEMERDCLI YGASML+ ERLM
Sbjct: 1013 KLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMI 1072
Query: 356 SSDVFTVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVP 517
SSD F V C CGLLGY G C C+ G +S +++PYACKLL QELQ MN+VP
Sbjct: 1073 SSDPFEVQVCRVCGLLGYFNQKLRAGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVP 1132
Query: 518 RLKL 529
RLKL
Sbjct: 1133 RLKL 1136
[118][TOP]
>UniRef100_B9F8X6 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9F8X6_ORYSJ
Length = 1115
Score = 233 bits (595), Expect = 6e-60
Identities = 112/172 (65%), Positives = 132/172 (76%), Gaps = 6/172 (3%)
Frame = +2
Query: 38 DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARA 217
+ D++ED + LV G+SY+GKD+ YSG G P +AYVF GPI+YQKLKHMV DKMHARA
Sbjct: 943 NADKVEDISRTLVKHGFSYNGKDLLYSGILGHPCQAYVFMGPIYYQKLKHMVLDKMHARA 1002
Query: 218 RGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCG 397
GPR LLTRQPTEGRSRDGGLRLGEMERDCLI YGASML+ ERL+ SSD + V C CG
Sbjct: 1003 SGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLLISSDPYQVQVCRKCG 1062
Query: 398 LLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
LLGY +C C+ G ++ +++PYACKLLFQELQ MNVVPRLKL +
Sbjct: 1063 LLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQELQAMNVVPRLKLTE 1114
[119][TOP]
>UniRef100_B8AR02 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group
RepID=B8AR02_ORYSI
Length = 1117
Score = 233 bits (595), Expect = 6e-60
Identities = 112/172 (65%), Positives = 132/172 (76%), Gaps = 6/172 (3%)
Frame = +2
Query: 38 DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARA 217
+ D++ED + LV G+SY+GKD+ YSG G P +AYVF GPI+YQKLKHMV DKMHARA
Sbjct: 945 NADKVEDISRTLVKHGFSYNGKDLLYSGILGHPCQAYVFMGPIYYQKLKHMVLDKMHARA 1004
Query: 218 RGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCG 397
GPR LLTRQPTEGRSRDGGLRLGEMERDCLI YGASML+ ERL+ SSD + V C CG
Sbjct: 1005 SGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLLISSDPYQVQVCRKCG 1064
Query: 398 LLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
LLGY +C C+ G ++ +++PYACKLLFQELQ MNVVPRLKL +
Sbjct: 1065 LLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQELQAMNVVPRLKLTE 1116
[120][TOP]
>UniRef100_Q8SQY8 DNA-directed RNA polymerase n=1 Tax=Encephalitozoon cuniculi
RepID=Q8SQY8_ENCCU
Length = 1110
Score = 233 bits (595), Expect = 6e-60
Identities = 111/177 (62%), Positives = 136/177 (76%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V EG+ TAF + +E E L+ G+SYSGKD F SG+TG PL AY+F GP+FYQ+L
Sbjct: 935 VLEGQILDSTAFKENSVEQTCELLIKHGFSYSGKDCFTSGTTGAPLAAYIFFGPVFYQRL 994
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DK+H RARGPRA+LTRQPTEGRS+DGGL+LGEMERDCLIGYGAS L+ ERLM SS
Sbjct: 995 KHMVADKIHMRARGPRAILTRQPTEGRSKDGGLKLGEMERDCLIGYGASSLITERLMTSS 1054
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
DVF Y C +CG+L +KG C C+ G +++PYACKLLFQEL MN++PRL ++
Sbjct: 1055 DVFEAYVCRSCGVLAFKGCCVACK-GTKPVKVKMPYACKLLFQELMSMNILPRLHIE 1110
[121][TOP]
>UniRef100_Q01FH9 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri
RepID=Q01FH9_OSTTA
Length = 2569
Score = 232 bits (592), Expect = 1e-59
Identities = 113/182 (62%), Positives = 134/182 (73%), Gaps = 6/182 (3%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
+ G+F GTAF GD +E + LV AG+S+ GKDM + G TGE L VF GP++YQKL
Sbjct: 992 LENGRFHDGTAFAGDSVEAIQQTLVEAGFSHKGKDMLHCGITGEALEVNVFMGPVYYQKL 1051
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DKMHARARGPR +LTRQPTEGR+RDGGLRLGEMERDCLIGYGAS L++ERLM SS
Sbjct: 1052 KHMVQDKMHARARGPRVVLTRQPTEGRARDGGLRLGEMERDCLIGYGASQLILERLMISS 1111
Query: 362 DVFTVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
D F C CGLLG+ K C C+T A V+ L++PYA KLLFQELQ N+ PR+
Sbjct: 1112 DQFEAQVCTKCGLLGFQHHITGKNACTLCKTEAEVATLKLPYAAKLLFQELQSCNIAPRI 1171
Query: 524 KL 529
L
Sbjct: 1172 NL 1173
[122][TOP]
>UniRef100_Q2URF4 DNA-directed RNA polymerase n=1 Tax=Aspergillus oryzae
RepID=Q2URF4_ASPOR
Length = 1180
Score = 230 bits (587), Expect = 5e-59
Identities = 110/175 (62%), Positives = 129/175 (73%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G+ GT F G +E+ ++ L+ G+SY GKD SG TGE L YVF GPI+YQKLKHM
Sbjct: 998 GQHGYGTCFGGSPVEEMSQILIDKGFSYGGKDYLTSGITGEALPFYVFTGPIYYQKLKHM 1057
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD
Sbjct: 1058 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1117
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
+ C CG +GY WCQ C++ +V + IPYA KLL QEL MNV RLKL+D
Sbjct: 1118 EIDVCEQCGFMGYLNWCQRCKSSRSVVKMAIPYAAKLLIQELMSMNVTARLKLED 1172
[123][TOP]
>UniRef100_Q0CN89 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
RepID=Q0CN89_ASPTN
Length = 1219
Score = 230 bits (587), Expect = 5e-59
Identities = 111/178 (62%), Positives = 130/178 (73%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G+ GT F G +E+ ++ L+ G+SY GKD SG TGE L YVF GPI+YQKL
Sbjct: 1034 VLSGQHGYGTCFGGSPVEEMSQILIDKGFSYGGKDYLTSGITGEALPFYVFTGPIYYQKL 1093
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SS
Sbjct: 1094 KHMVQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISS 1153
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D + C CG +GY WCQ C++ +V + IPYA KLL QEL MNV RLKL+D
Sbjct: 1154 DRHEIDVCEKCGFMGYLNWCQRCKSSRSVVKMVIPYAAKLLIQELMSMNVTARLKLED 1211
[124][TOP]
>UniRef100_B8MYG2 DNA-directed RNA polymerase n=1 Tax=Aspergillus flavus NRRL3357
RepID=B8MYG2_ASPFN
Length = 1218
Score = 230 bits (587), Expect = 5e-59
Identities = 110/175 (62%), Positives = 129/175 (73%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G+ GT F G +E+ ++ L+ G+SY GKD SG TGE L YVF GPI+YQKLKHM
Sbjct: 1036 GQHGYGTCFGGSPVEEMSQILIDKGFSYGGKDYLTSGITGEALPFYVFTGPIYYQKLKHM 1095
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD
Sbjct: 1096 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1155
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
+ C CG +GY WCQ C++ +V + IPYA KLL QEL MNV RLKL+D
Sbjct: 1156 EIDVCEQCGFMGYLNWCQRCKSSRSVVKMAIPYAAKLLIQELMSMNVTARLKLED 1210
[125][TOP]
>UniRef100_B8MJE1 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC 10500
RepID=B8MJE1_TALSN
Length = 1212
Score = 230 bits (587), Expect = 5e-59
Identities = 113/178 (63%), Positives = 129/178 (72%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G+ GTAF G +E+ + LV G+SY GKD SG TG+PL YVF GPI+YQKL
Sbjct: 1027 VLSGQHGYGTAFGGSPVEEMSAILVDKGFSYGGKDYLTSGITGDPLPFYVFTGPIYYQKL 1086
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DKMH+R+ GPRA LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SS
Sbjct: 1087 KHMVQDKMHSRSTGPRATLTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMLSS 1146
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D V C CG +GY+ WCQ CR+ V + IPYA KLL QEL MNV RLKL+D
Sbjct: 1147 DKHEVDICEKCGFMGYQNWCQRCRSSRGVVKMTIPYAAKLLIQELLSMNVTARLKLED 1204
[126][TOP]
>UniRef100_B2B0Z1 DNA-directed RNA polymerase n=1 Tax=Podospora anserina
RepID=B2B0Z1_PODAN
Length = 1160
Score = 230 bits (587), Expect = 5e-59
Identities = 110/174 (63%), Positives = 135/174 (77%)
Frame = +2
Query: 14 KFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMV 193
++ G AF +E+ + L+ G+S+ GKD F SG TGEP AY+F GPIFYQ+LKHMV
Sbjct: 981 EYGFGDAFRSHPVEEMGKVLIEHGFSWEGKDYFTSGITGEPHEAYLFNGPIFYQRLKHMV 1040
Query: 194 KDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFT 373
DKMH+R+RGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YGAS LL+ERLM+SSDV
Sbjct: 1041 ADKMHSRSRGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGASQLLLERLMYSSDVTK 1100
Query: 374 VYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
V C CGL+GYKG+CQ C+T + V+ + +PYA KLL QEL MNV R++L+D
Sbjct: 1101 VDVCERCGLMGYKGYCQTCKTTSNVTKMNMPYAAKLLLQELISMNVGVRMQLED 1154
[127][TOP]
>UniRef100_B0XMI5 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus
RepID=B0XMI5_ASPFC
Length = 1200
Score = 230 bits (587), Expect = 5e-59
Identities = 111/175 (63%), Positives = 127/175 (72%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G GT F G +E+ + L+ G+SY GKD SG TGE L YVF GPI+YQKLKHM
Sbjct: 1018 GHHGYGTCFGGTPVEEASRVLIDHGFSYGGKDYLTSGITGEALPFYVFTGPIYYQKLKHM 1077
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD
Sbjct: 1078 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1137
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
+ C CG +GY WCQ C++ +V + IPYA KLL QEL MNV RLKLDD
Sbjct: 1138 EIDVCEQCGFMGYLNWCQRCKSSRSVVKMTIPYAAKLLIQELMSMNVTARLKLDD 1192
[128][TOP]
>UniRef100_A2Q8V9 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2Q8V9_ASPNC
Length = 1225
Score = 230 bits (587), Expect = 5e-59
Identities = 110/175 (62%), Positives = 129/175 (73%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G+ GT F G +++ ++ L+ G+SY GKD SG TGE L YVF GPI+YQKLKHM
Sbjct: 1043 GQHGYGTCFGGSPVQEMSQILIDNGFSYGGKDYLTSGITGEALPFYVFTGPIYYQKLKHM 1102
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD
Sbjct: 1103 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1162
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
+ C CG +GY WCQ C++ +V + IPYA KLL QEL MNV RLKLDD
Sbjct: 1163 EIDVCEQCGFMGYLNWCQRCKSSRSVVKMAIPYAAKLLIQELMSMNVTARLKLDD 1217
[129][TOP]
>UniRef100_A8IY03 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IY03_CHLRE
Length = 1161
Score = 230 bits (586), Expect = 6e-59
Identities = 119/186 (63%), Positives = 138/186 (74%), Gaps = 11/186 (5%)
Frame = +2
Query: 11 GKFRMGTAFD-----GDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQ 175
G+F GTAF D++ED + LV G+SYSGKD SG TGEPL AY+F GP++YQ
Sbjct: 975 GRFHYGTAFGEPSNLADKVEDISATLVRHGFSYSGKDFLTSGITGEPLEAYIFMGPVYYQ 1034
Query: 176 KLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMH 355
KLKHMV DKMHARARGPR +LTRQPTEGRSRDGGLRLGEMERDCLI YGASMLL+ERLM
Sbjct: 1035 KLKHMVLDKMHARARGPRVVLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLLLERLMI 1094
Query: 356 SSDVFTVYACGTCGLLGYKGWCQYC------RTGAAVSALQIPYACKLLFQELQGMNVVP 517
SSD F V A GLLG+ + C RT ++ ++IPYACKLLFQELQ MN++P
Sbjct: 1095 SSDQFEVRARVCVGLLGWWDAHRNCPVSPVDRTSDNMATIKIPYACKLLFQELQSMNIIP 1154
Query: 518 RLKLDD 535
RL+L D
Sbjct: 1155 RLRLAD 1160
[130][TOP]
>UniRef100_A1D510 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1D510_NEOFI
Length = 1200
Score = 230 bits (586), Expect = 6e-59
Identities = 111/175 (63%), Positives = 127/175 (72%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G GT F G +E+ + L+ G+SY GKD SG TGE L YVF GPI+YQKLKHM
Sbjct: 1018 GHHGYGTCFGGTPVEEASRILIDHGFSYGGKDYLTSGITGEALPFYVFTGPIYYQKLKHM 1077
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD
Sbjct: 1078 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1137
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
+ C CG +GY WCQ C++ +V + IPYA KLL QEL MNV RLKLDD
Sbjct: 1138 EIDVCEQCGFMGYLNWCQRCKSSRSVVKMTIPYAAKLLIQELMSMNVTARLKLDD 1192
[131][TOP]
>UniRef100_A1CS37 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
RepID=A1CS37_ASPCL
Length = 1246
Score = 229 bits (585), Expect = 8e-59
Identities = 110/175 (62%), Positives = 128/175 (73%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G GT F G +E+ + L+A G++Y GK+ SG TGE L YVF GPI+YQKLKHM
Sbjct: 1064 GHHGYGTCFGGTPVEETSRTLIAHGFNYGGKEYLTSGITGEALPFYVFTGPIYYQKLKHM 1123
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD
Sbjct: 1124 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDRH 1183
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
+ C CG +GY WCQ C++ +V + IPYA KLL QEL MNV RLKLDD
Sbjct: 1184 EIDVCEQCGFMGYLNWCQRCKSSRSVVKMTIPYAAKLLIQELMSMNVTARLKLDD 1238
[132][TOP]
>UniRef100_B6QHR9 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC 18224
RepID=B6QHR9_PENMQ
Length = 1212
Score = 229 bits (584), Expect = 1e-58
Identities = 114/178 (64%), Positives = 127/178 (71%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G+ GTAF G +E + LV G+SY GKD SG TGEPL YVF GPI+YQKL
Sbjct: 1027 VLSGQHGYGTAFGGSPVEQMSAILVDKGFSYGGKDYLTSGITGEPLPFYVFMGPIYYQKL 1086
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DKMH+R+ GPRA LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SS
Sbjct: 1087 KHMVQDKMHSRSTGPRATLTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMLSS 1146
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D V C CG +GY+ WCQ CR+ V + IPYA KLL QEL MNV RLKL D
Sbjct: 1147 DKHEVDICEKCGFMGYQNWCQRCRSSRGVVKMTIPYAAKLLIQELLSMNVTARLKLGD 1204
[133][TOP]
>UniRef100_C8VU19 DNA-directed RNA polymerase III, beta subunit, putative
(AFU_orthologue; AFUA_1G02460) n=2 Tax=Emericella
nidulans RepID=C8VU19_EMENI
Length = 1225
Score = 229 bits (583), Expect = 1e-58
Identities = 112/178 (62%), Positives = 127/178 (71%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G+ GT F G +E + L+ G+SY GKD SG TGE L YVF GPI+YQKL
Sbjct: 1040 VLSGQHGYGTCFSGTPVEQMTQTLIDKGFSYGGKDYLTSGITGEALPFYVFTGPIYYQKL 1099
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DKMH+RARGPRA LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SS
Sbjct: 1100 KHMVQDKMHSRARGPRATLTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISS 1159
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D V C CG +GY WCQ C++ +V + IPYA KLL QEL MNV RLKL+D
Sbjct: 1160 DRHEVDVCEQCGFMGYLNWCQRCKSSRSVVKMVIPYAAKLLIQELMSMNVTARLKLED 1217
[134][TOP]
>UniRef100_Q8I5X9 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7
RepID=Q8I5X9_PLAF7
Length = 1450
Score = 228 bits (582), Expect = 2e-58
Identities = 107/174 (61%), Positives = 133/174 (76%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+++ G+ F G E+ AE L G++ S K++ YSG TGEPL Y+F GPI+YQKL
Sbjct: 1272 VMDGEYKYGSIFSGTPFEEIAEILFRYGFNCSSKELLYSGLTGEPLETYIFMGPIYYQKL 1331
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DK+HARARGPR LLTRQPTEGRS++GGLRLGEMERDCLI YG S LL+ERLM SS
Sbjct: 1332 KHMVQDKIHARARGPRQLLTRQPTEGRSKEGGLRLGEMERDCLIAYGVSNLLLERLMLSS 1391
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
DV VY C CG++GY +C +C+ +Q+PYACKLLFQELQ MNV P++
Sbjct: 1392 DVCNVYICEDCGMMGYDLYCTFCKKCDKNIVIQMPYACKLLFQELQTMNVFPKI 1445
[135][TOP]
>UniRef100_Q9P6E7 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
RepID=Q9P6E7_NEUCR
Length = 1155
Score = 227 bits (579), Expect = 4e-58
Identities = 109/176 (61%), Positives = 133/176 (75%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
E + G AF +E +AL+ G+S+ GKD F SG TGEP+ AY++ GPIFYQ+LKH
Sbjct: 974 EKDYGFGDAFRSHPVESMGQALIDHGFSWEGKDYFTSGITGEPMEAYIYNGPIFYQRLKH 1033
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV+DKMH+R+RGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YGAS LL+ERLM SSD
Sbjct: 1034 MVQDKMHSRSRGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGASQLLLERLMISSDG 1093
Query: 368 FTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
+ C CGL GYKG+C C++ V+ + +PYACKLL QEL MNV +LKL+D
Sbjct: 1094 TELDVCQECGLFGYKGYCNACKSTRNVTQMTMPYACKLLVQELISMNVGVKLKLED 1149
[136][TOP]
>UniRef100_A4HBG9 DNA-directed RNA polymerase n=1 Tax=Leishmania braziliensis
RepID=A4HBG9_LEIBR
Length = 1125
Score = 227 bits (578), Expect = 5e-58
Identities = 108/176 (61%), Positives = 130/176 (73%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G GTAF GD + + L++ GY+Y GKD+FYSG TGE ++ YVF GPI+YQ+LKHM
Sbjct: 949 GSMGDGTAFGGDSADSISRQLLSFGYNYHGKDVFYSGITGELMQGYVFFGPIYYQRLKHM 1008
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V DKMHAR+ GPR++LTRQPTEGRSR GGLR+GEMERDC++GYGAS LL ERL+ SSD+F
Sbjct: 1009 VTDKMHARSTGPRSMLTRQPTEGRSRSGGLRVGEMERDCMVGYGASSLLNERLLISSDLF 1068
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDDP 538
T C CG LGY C YC+T S + +PYA KLL QELQGM V RL +D P
Sbjct: 1069 TADICHVCGNLGYNNRCTYCKTKGTTSKVNMPYAFKLLIQELQGMGVSLRLTMDSP 1124
[137][TOP]
>UniRef100_Q0V2J8 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum
RepID=Q0V2J8_PHANO
Length = 1443
Score = 227 bits (578), Expect = 5e-58
Identities = 112/178 (62%), Positives = 130/178 (73%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G GTAF G R+ED A+ LV+ G+SY+GKD SG TGE + Y F GPI+YQKL
Sbjct: 1260 VLNGTLEYGTAFGGSRVEDMADILVSKGFSYTGKDYLTSGITGEAHQFYTFFGPIYYQKL 1319
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DKMHARARGPRA+LTRQPTEGR+RDGGLRLGEMERDCLI YGAS LL+ERLM SS
Sbjct: 1320 KHMVQDKMHARARGPRAILTRQPTEGRARDGGLRLGEMERDCLIAYGASQLLLERLMISS 1379
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D V C CG +GY G+C+ C + AV + +PYA KLL QEL MNV + L D
Sbjct: 1380 DAHNVDVCEKCGQMGYSGYCKLCESEKAVRRITMPYAAKLLIQELGSMNVKVTIGLAD 1437
[138][TOP]
>UniRef100_A4R1B6 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
RepID=A4R1B6_MAGGR
Length = 1158
Score = 227 bits (578), Expect = 5e-58
Identities = 109/174 (62%), Positives = 133/174 (76%)
Frame = +2
Query: 14 KFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMV 193
++ G AF +E+ +AL+ G+S+ GKD F SG TGEPL AY+F GPI+YQ+LKHMV
Sbjct: 979 RYGYGDAFRSHPVEEMGKALIERGFSWEGKDYFTSGITGEPLEAYLFNGPIYYQRLKHMV 1038
Query: 194 KDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFT 373
+DKMH+RA+GPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YGAS LL+ERLM SSD
Sbjct: 1039 QDKMHSRAKGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGASQLLLERLMLSSDATK 1098
Query: 374 VYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
+ C CGL GYKG+CQ C++ V+ + +PYA KLL QEL MNV RL L+D
Sbjct: 1099 IDICQRCGLFGYKGYCQTCKSTKEVTEMTMPYAAKLLVQELISMNVGVRLVLED 1152
[139][TOP]
>UniRef100_Q9BJ42 DNA-directed RNA polymerase (Fragment) n=1 Tax=Leishmania major
RepID=Q9BJ42_LEIMA
Length = 606
Score = 226 bits (575), Expect = 1e-57
Identities = 107/176 (60%), Positives = 131/176 (74%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G GTAF G+ + ++ L++ GY+Y GKD+FYSG TGE ++ YVF GPI+YQ+LKHM
Sbjct: 430 GSMGDGTAFGGESADSISQQLLSFGYNYHGKDVFYSGITGELMQGYVFFGPIYYQRLKHM 489
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V DKMHAR+ GPR++LTRQPTEGRSR GGLR+GEMERDC++GYGAS LL ERL+ SSD+F
Sbjct: 490 VTDKMHARSTGPRSMLTRQPTEGRSRSGGLRVGEMERDCMVGYGASNLLNERLLISSDMF 549
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDDP 538
T C CG LGY C YC+T S + +PYA KLL QELQGM V RL +D P
Sbjct: 550 TADICHVCGNLGYNNRCTYCKTKGTTSKVNMPYAFKLLIQELQGMGVSLRLTMDSP 605
[140][TOP]
>UniRef100_Q4QD43 DNA-directed RNA polymerase n=1 Tax=Leishmania major
RepID=Q4QD43_LEIMA
Length = 1132
Score = 226 bits (575), Expect = 1e-57
Identities = 107/176 (60%), Positives = 131/176 (74%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G GTAF G+ + ++ L++ GY+Y GKD+FYSG TGE ++ YVF GPI+YQ+LKHM
Sbjct: 956 GSMGDGTAFGGESADSISQQLLSFGYNYHGKDVFYSGITGELMQGYVFFGPIYYQRLKHM 1015
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V DKMHAR+ GPR++LTRQPTEGRSR GGLR+GEMERDC++GYGAS LL ERL+ SSD+F
Sbjct: 1016 VTDKMHARSTGPRSMLTRQPTEGRSRSGGLRVGEMERDCMVGYGASNLLNERLLISSDMF 1075
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDDP 538
T C CG LGY C YC+T S + +PYA KLL QELQGM V RL +D P
Sbjct: 1076 TADICHVCGNLGYNNRCTYCKTKGTTSKVNMPYAFKLLIQELQGMGVSLRLTMDSP 1131
[141][TOP]
>UniRef100_UPI000023E0C8 hypothetical protein FG00843.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023E0C8
Length = 1157
Score = 225 bits (573), Expect = 2e-57
Identities = 109/173 (63%), Positives = 132/173 (76%)
Frame = +2
Query: 17 FRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVK 196
+ G AF +E+ ++ LV G+S+ GKD F SG TGEPL AYVF GPI+YQ+LKHMV+
Sbjct: 979 YGFGDAFRSHPLEEMSQVLVDHGFSWEGKDYFTSGITGEPLEAYVFNGPIYYQRLKHMVQ 1038
Query: 197 DKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTV 376
DKMH+R+RGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YGAS LL+ERLM SSD +
Sbjct: 1039 DKMHSRSRGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGASQLLLERLMISSDGTEI 1098
Query: 377 YACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
C CGL GYKG+C C++ V+ + +PYA KLL QEL MNV RL++DD
Sbjct: 1099 DICQQCGLFGYKGYCHTCKSTREVTKMTMPYAAKLLVQELISMNVGVRLQMDD 1151
[142][TOP]
>UniRef100_A5K0G6 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax
RepID=A5K0G6_PLAVI
Length = 1427
Score = 225 bits (573), Expect = 2e-57
Identities = 106/174 (60%), Positives = 133/174 (76%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+F+ G+ F G E+ A L G++ S K++ YSG TGEPL Y+F GPI+YQKL
Sbjct: 1249 VLDGEFKYGSIFSGTPFEEMASILFKYGFNCSCKELLYSGLTGEPLETYIFMGPIYYQKL 1308
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DK+HARARGPR LLTRQPTEGRS++GGLRLGEMERDCLI YG S LL+ERLM SS
Sbjct: 1309 KHMVQDKIHARARGPRQLLTRQPTEGRSKEGGLRLGEMERDCLIAYGVSNLLLERLMLSS 1368
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
DV VY C CG++GY +C +C+ + +++PYACKLLFQELQ MNV P++
Sbjct: 1369 DVCDVYICEDCGMMGYDTYCTFCQKCDKNALVKMPYACKLLFQELQTMNVFPKI 1422
[143][TOP]
>UniRef100_B6HTA4 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6HTA4_PENCW
Length = 1208
Score = 225 bits (573), Expect = 2e-57
Identities = 112/186 (60%), Positives = 132/186 (70%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G+ GT F G +++ ++ L+ G+SY GKD SG TGEPL YVF GPI+YQKL
Sbjct: 1023 VLSGQHGYGTCFGGSPVQEMSQILIDKGFSYGGKDYLTSGITGEPLPFYVFTGPIYYQKL 1082
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DKMH+RA+GP A LTRQPTEGRSR+GGLRLGEMERDCLI YG S LL+ERLM SS
Sbjct: 1083 KHMVQDKMHSRAKGPTATLTRQPTEGRSRNGGLRLGEMERDCLIAYGTSQLLLERLMISS 1142
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDDP* 541
D V C CG +GY WC C++ +V + IPYA KLL QEL MNV RLKLDD
Sbjct: 1143 DRHEVDICEKCGFMGYLNWCPGCKSSRSVVKMVIPYAAKLLIQELMSMNVTARLKLDDE- 1201
Query: 542 KTQTMG 559
+TMG
Sbjct: 1202 FPETMG 1207
[144][TOP]
>UniRef100_Q7RNH0 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii
RepID=Q7RNH0_PLAYO
Length = 1323
Score = 224 bits (571), Expect = 3e-57
Identities = 104/174 (59%), Positives = 132/174 (75%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+++ G+ F G E+ AE L G+++S K++ YSG TGEPL Y+F GPI+YQKL
Sbjct: 1145 VLDGEYKYGSIFSGTPFEEAAEVLFRYGFNWSCKELLYSGLTGEPLETYIFMGPIYYQKL 1204
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DK+HAR+RGPR LLTRQPTEGRS++GGLRLGEMERDCLI YG S LL+ERLM SS
Sbjct: 1205 KHMVQDKIHARSRGPRQLLTRQPTEGRSKEGGLRLGEMERDCLIAYGVSNLLLERLMLSS 1264
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
DV Y C CG++GY C +C+ +++PYACKLLFQELQ MNV P++
Sbjct: 1265 DVCDAYICEDCGMMGYDSCCTFCKKYDKNVVVKMPYACKLLFQELQTMNVFPKI 1318
[145][TOP]
>UniRef100_C9SKJ8 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Verticillium
albo-atrum VaMs.102 RepID=C9SKJ8_9PEZI
Length = 1105
Score = 224 bits (571), Expect = 3e-57
Identities = 109/173 (63%), Positives = 132/173 (76%)
Frame = +2
Query: 17 FRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVK 196
+ G AF ++ +EALV G+S+ GKD F SG TGEPL AY+F GPI+YQ+LKHMV+
Sbjct: 926 YGFGDAFRSHPLKQMSEALVDHGFSWEGKDYFTSGITGEPLEAYIFNGPIYYQRLKHMVQ 985
Query: 197 DKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTV 376
DKMH+RARGPRA+LTRQPTEGRSR+GGLRLGEMERDCLI YGAS LL+ERLM SSD +
Sbjct: 986 DKMHSRARGPRAILTRQPTEGRSREGGLRLGEMERDCLIAYGASQLLLERLMISSDGTEI 1045
Query: 377 YACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
C CGL GYKG+C CR+ V+ + +PYA KLL QEL MNV RL+++D
Sbjct: 1046 DICQQCGLFGYKGYCHTCRSTKEVTKMTMPYAAKLLVQELISMNVGVRLQMED 1098
[146][TOP]
>UniRef100_B3LB54 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H
RepID=B3LB54_PLAKH
Length = 1401
Score = 224 bits (570), Expect = 4e-57
Identities = 105/174 (60%), Positives = 132/174 (75%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+ + G+ F G E+ A L G++ S K++ YSG TGEPL Y+F GPI+YQKL
Sbjct: 1223 VLDGELKYGSIFSGTPFEEMASILFKYGFNCSSKELLYSGLTGEPLETYIFMGPIYYQKL 1282
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DK+HARARGPR LLTRQPTEGRS++GGLRLGEMERDCLI YG S LL+ERLM SS
Sbjct: 1283 KHMVQDKIHARARGPRQLLTRQPTEGRSKEGGLRLGEMERDCLIAYGVSNLLLERLMLSS 1342
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
DV VY C CG++GY +C +C+ + +++PYACKLLFQELQ MNV P++
Sbjct: 1343 DVCDVYICEDCGMMGYDTYCTFCQKCDKNALVKMPYACKLLFQELQTMNVFPKI 1396
[147][TOP]
>UniRef100_A7AM79 DNA-directed RNA polymerase, beta subunit, putative n=1 Tax=Babesia
bovis RepID=A7AM79_BABBO
Length = 1171
Score = 224 bits (570), Expect = 4e-57
Identities = 106/178 (59%), Positives = 128/178 (71%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G F GT F+ D + +L+ G+ +GK++ YSG TGEPL +F GP++YQKL
Sbjct: 990 VLNGIFEDGTPFEADSLPAIERSLIKKGFHPAGKEILYSGITGEPLETLIFTGPMYYQKL 1049
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DK+HARA GPR LTRQPTEGRS+DGGLRLGEMERDCLI YGAS LL+ERLM SS
Sbjct: 1050 KHMVSDKIHARAVGPRQSLTRQPTEGRSKDGGLRLGEMERDCLIAYGASGLLVERLMLSS 1109
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
DVF + C CG +GY GWC YC+ + + IPYACKLLFQELQ MN+ P + L +
Sbjct: 1110 DVFQMDVCHQCGFIGYDGWCAYCKQRGQTATVAIPYACKLLFQELQAMNIRPNVILKE 1167
[148][TOP]
>UniRef100_Q6E6F3 DNA-directed RNA polymerase n=1 Tax=Antonospora locustae
RepID=Q6E6F3_ANTLO
Length = 1014
Score = 223 bits (569), Expect = 6e-57
Identities = 108/176 (61%), Positives = 129/176 (73%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G+ T F D ED + L+ GYSY GKD F +G TG+ YVF GP++YQ+L
Sbjct: 838 VFTGRQSDATVFREDITEDLSHILIKHGYSYCGKDTFTNGITGDVYEGYVFFGPVYYQRL 897
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DKMHAR+RGPRA+LTRQPTEG+SR+GGLRLGEMERDCLIGYGAS +L ERLM SS
Sbjct: 898 KHMVADKMHARSRGPRAMLTRQPTEGKSREGGLRLGEMERDCLIGYGASAILCERLMISS 957
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
DVF Y C CG++ YK C C+ G V + +PYACKLLFQEL MN++PR+KL
Sbjct: 958 DVFRAYICHRCGIIVYKNMCTLCKRGDPV-PVDMPYACKLLFQELMSMNILPRIKL 1012
[149][TOP]
>UniRef100_Q2GW04 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
RepID=Q2GW04_CHAGB
Length = 1155
Score = 223 bits (568), Expect = 8e-57
Identities = 110/176 (62%), Positives = 133/176 (75%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
E + G AF +E+ + LV G+S+ GKD F SG TGEP AY+F GPI+YQ+LKH
Sbjct: 974 ERDYGFGDAFRSHPVEEMGKVLVEHGFSWEGKDYFTSGITGEPHEAYLFNGPIYYQRLKH 1033
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV+DKMH+R+RGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YGAS LL+ERLM SSD
Sbjct: 1034 MVQDKMHSRSRGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGASQLLLERLMISSDG 1093
Query: 368 FTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
V C CGLLGYKG+CQ C + + V+ + +PYA KLL QEL MNV R++L+D
Sbjct: 1094 TQVDICELCGLLGYKGFCQTCGSTSQVTQMTMPYAAKLLVQELISMNVGVRMQLED 1149
[150][TOP]
>UniRef100_Q4Z2F1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Plasmodium berghei
RepID=Q4Z2F1_PLABE
Length = 446
Score = 223 bits (567), Expect = 1e-56
Identities = 104/174 (59%), Positives = 132/174 (75%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+++ G+ F G E+ AE L G+++S K++ YSG TGEPL Y+F GPI+YQKL
Sbjct: 268 VLDGEYKYGSIFSGTPFEEAAEVLFRYGFNWSCKELLYSGLTGEPLETYIFMGPIYYQKL 327
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DK+HAR+RGPR LLTRQPTEGRS++GGLRLGEMERDCLI YG S LL+ERLM SS
Sbjct: 328 KHMVQDKIHARSRGPRQLLTRQPTEGRSKEGGLRLGEMERDCLIAYGVSNLLLERLMLSS 387
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
DV Y C CG++GY C +C+ +++PYACKLLFQELQ MNV P++
Sbjct: 388 DVCDTYICEDCGMMGYDLCCTFCKKYDKNVVVKMPYACKLLFQELQTMNVFPKI 441
[151][TOP]
>UniRef100_B9IDF9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9IDF9_POPTR
Length = 1141
Score = 222 bits (565), Expect = 2e-56
Identities = 112/190 (58%), Positives = 132/190 (69%), Gaps = 17/190 (8%)
Frame = +2
Query: 11 GKFRMGTAFD-----GDRIE------DCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFA 157
G+F G+AF DR+E E LV G+SY+GKD YSG TG PL+AY+F
Sbjct: 949 GRFHYGSAFGEPSGHADRVEAIRHFLSLIETLVKHGFSYNGKDFIYSGITGCPLQAYIFM 1008
Query: 158 GPIFYQKLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL 337
GPI+YQKLKHMV DKMHAR GPR +LTRQPT+GR+R+GGLR+GEME+DCL+ YG SMLL
Sbjct: 1009 GPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTDGRARNGGLRVGEMEKDCLVAYGTSMLL 1068
Query: 338 MERLMHSSDVFTVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQ 499
ERLM SSD F C CGLLGY C C+ G VS +++PYACKLL QELQ
Sbjct: 1069 YERLMVSSDQFEAQVCRACGLLGYYNQKLKAAMCTTCKNGDKVSTMKLPYACKLLIQELQ 1128
Query: 500 GMNVVPRLKL 529
MN+VPRLKL
Sbjct: 1129 SMNIVPRLKL 1138
[152][TOP]
>UniRef100_C4QD48 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni
RepID=C4QD48_SCHMA
Length = 1126
Score = 221 bits (564), Expect = 2e-56
Identities = 103/175 (58%), Positives = 130/175 (74%), Gaps = 1/175 (0%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
EGK R G+AF GD E ++ L+ GY Y GK++ YSG TG PL A+++ GP++YQ+LKH
Sbjct: 939 EGKIRDGSAFSGDPAEVLSQVLIDHGYHYLGKEILYSGVTGAPLEAFIYFGPVYYQRLKH 998
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV DK+HAR+RGP LTRQPTEGRSR+GGLR+GEMERDC I YG S LL+ERL+ SSD
Sbjct: 999 MVMDKVHARSRGPVTALTRQPTEGRSREGGLRVGEMERDCFIAYGTSQLLLERLLLSSDA 1058
Query: 368 FTVYACGTCGLLGYK-GWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
+ C CGLL WCQYCR+ V ++++PYACKLLFQEL M ++PRL+L
Sbjct: 1059 YDACVCEKCGLLATSPNWCQYCRSSRQVVSVRMPYACKLLFQELMCMRILPRLRL 1113
[153][TOP]
>UniRef100_C4QD47 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni
RepID=C4QD47_SCHMA
Length = 1128
Score = 221 bits (564), Expect = 2e-56
Identities = 103/175 (58%), Positives = 130/175 (74%), Gaps = 1/175 (0%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
EGK R G+AF GD E ++ L+ GY Y GK++ YSG TG PL A+++ GP++YQ+LKH
Sbjct: 941 EGKIRDGSAFSGDPAEVLSQVLIDHGYHYLGKEILYSGVTGAPLEAFIYFGPVYYQRLKH 1000
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV DK+HAR+RGP LTRQPTEGRSR+GGLR+GEMERDC I YG S LL+ERL+ SSD
Sbjct: 1001 MVMDKVHARSRGPVTALTRQPTEGRSREGGLRVGEMERDCFIAYGTSQLLLERLLLSSDA 1060
Query: 368 FTVYACGTCGLLGYK-GWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
+ C CGLL WCQYCR+ V ++++PYACKLLFQEL M ++PRL+L
Sbjct: 1061 YDACVCEKCGLLATSPNWCQYCRSSRQVVSVRMPYACKLLFQELMCMRILPRLRL 1115
[154][TOP]
>UniRef100_C7YHY2 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7YHY2_NECH7
Length = 1156
Score = 220 bits (560), Expect = 6e-56
Identities = 105/173 (60%), Positives = 132/173 (76%)
Frame = +2
Query: 17 FRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVK 196
+ G AF +E+ ++ LV G+S+ GKD F SG TGEPL AY+F GPI+YQ+LKHMV+
Sbjct: 978 YGFGDAFRSHPLEEMSKVLVDHGFSWEGKDYFTSGVTGEPLEAYIFNGPIYYQRLKHMVQ 1037
Query: 197 DKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTV 376
DKMH+R+RGP+A+LTRQPTEGRSR+GGLRLGEMERDCLI YGAS LL+ERLM SSD +
Sbjct: 1038 DKMHSRSRGPKAILTRQPTEGRSREGGLRLGEMERDCLIAYGASQLLLERLMISSDGTEI 1097
Query: 377 YACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
C CGL GYKG+C C++ V+ + +PYA KLL QEL MNV RL+++D
Sbjct: 1098 DICQQCGLFGYKGYCHTCKSTREVTKMTMPYAAKLLVQELISMNVGVRLQMED 1150
[155][TOP]
>UniRef100_C4V6K7 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01
RepID=C4V6K7_NOSCE
Length = 1091
Score = 218 bits (555), Expect = 2e-55
Identities = 102/176 (57%), Positives = 131/176 (74%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
EGK T F + ++ + L G+++ GKD FYSG +GEP+ AY+F GP+FYQ+LKH
Sbjct: 917 EGKISDATIFKKNEVDLVCDILSNNGFNFGGKDCFYSGISGEPIYAYIFYGPVFYQRLKH 976
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV DK+H RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGAS L++ERLM SSD+
Sbjct: 977 MVADKIHMRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIGYGASSLIVERLMESSDL 1036
Query: 368 FTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
F + C CG+L K C C + +++PYACKLLFQEL MN++P+L +++
Sbjct: 1037 FETFCCKNCGILVPKNGCNVCNDTNPL-PIRLPYACKLLFQELMSMNILPKLNVNN 1091
[156][TOP]
>UniRef100_C0SI08 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb03 RepID=C0SI08_PARBP
Length = 1232
Score = 217 bits (553), Expect = 4e-55
Identities = 111/175 (63%), Positives = 124/175 (70%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G+F GTAF G +E+ + LV G+SY GKD SG TGE L AYVF GPI+YQKLKHM
Sbjct: 1065 GQFSYGTAFGGSPVEEMSAVLVKHGFSYGGKDCLTSGITGESLPAYVFMGPIYYQKLKHM 1124
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V+DKMH+RARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG S LL+ERLM SSD +
Sbjct: 1125 VQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLERLMISSDQY 1184
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
V C +CG +GY GWCQ KLL QEL MNVV RLKL D
Sbjct: 1185 EVDVCESCGFMGYSGWCQ---------------RSKLLVQELFSMNVVARLKLAD 1224
[157][TOP]
>UniRef100_C5KAB2 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
RepID=C5KAB2_9ALVE
Length = 1140
Score = 213 bits (543), Expect = 6e-54
Identities = 106/178 (59%), Positives = 129/178 (72%), Gaps = 1/178 (0%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+ GTAF G E ++L+ G+ S K+ SG TGE L Y+F GPI+YQKL
Sbjct: 961 VLDGERSYGTAFGGTTKEHMTQSLIRHGFHPSAKEYITSGVTGEALECYIFVGPIYYQKL 1020
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DK+HAR+ GP LTRQPTEGR++DGGLRLGEMERDCL+ YGAS LL+ERLM SS
Sbjct: 1021 KHMVMDKIHARSTGPVNQLTRQPTEGRAKDGGLRLGEMERDCLVAYGASNLLLERLMLSS 1080
Query: 362 DVFTVYACGTCGLLGYK-GWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
DVFT C CGLL Y+ G C+ C T + +++PYACKLLFQELQ MNV PRLK++
Sbjct: 1081 DVFTASVCRRCGLLSYQNGTCKLCGTSENIVDIRMPYACKLLFQELQAMNVCPRLKVE 1138
[158][TOP]
>UniRef100_C5K7V0 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
RepID=C5K7V0_9ALVE
Length = 1159
Score = 213 bits (543), Expect = 6e-54
Identities = 106/178 (59%), Positives = 129/178 (72%), Gaps = 1/178 (0%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V +G+ GTAF G E ++L+ G+ S K+ SG TGE L Y+F GPI+YQKL
Sbjct: 980 VLDGERSYGTAFGGTTKEHMTQSLIRHGFHPSAKEYITSGVTGEALECYIFVGPIYYQKL 1039
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DK+HAR+ GP LTRQPTEGR++DGGLRLGEMERDCL+ YGAS LL+ERLM SS
Sbjct: 1040 KHMVMDKIHARSTGPVNQLTRQPTEGRAKDGGLRLGEMERDCLVAYGASNLLLERLMLSS 1099
Query: 362 DVFTVYACGTCGLLGYK-GWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
DVFT C CGLL Y+ G C+ C T + +++PYACKLLFQELQ MNV PRLK++
Sbjct: 1100 DVFTASVCRRCGLLSYQNGTCKLCGTSENIVDIRMPYACKLLFQELQAMNVCPRLKVE 1157
[159][TOP]
>UniRef100_B7XI25 DNA-directed RNA polymerase n=1 Tax=Enterocytozoon bieneusi H348
RepID=B7XI25_ENTBH
Length = 1107
Score = 213 bits (542), Expect = 8e-54
Identities = 99/156 (63%), Positives = 123/156 (78%)
Frame = +2
Query: 65 EALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPRALLTR 244
+ L+ GYSYSGKD+F SG TGE AY+F GPIFYQ+LKHMV DK+H R+RGPRA+LTR
Sbjct: 952 QILIDHGYSYSGKDVFTSGITGEQFEAYIFFGPIFYQRLKHMVADKIHCRSRGPRAVLTR 1011
Query: 245 QPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGYKGWCQ 424
QPTEGRS+DGGLRLGEMERDCLIGYGA+ LL ERLMH SD F + C TCG++ YK C
Sbjct: 1012 QPTEGRSKDGGLRLGEMERDCLIGYGANSLLNERLMHCSDEFDAFICETCGIICYKERCY 1071
Query: 425 YCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
+C + +++PYACKLLFQE+ MN++P++ L+
Sbjct: 1072 WCSKKPII--VKMPYACKLLFQEMMAMNILPKIILE 1105
[160][TOP]
>UniRef100_Q9FKF1 DNA-directed RNA polymerase n=1 Tax=Arabidopsis thaliana
RepID=Q9FKF1_ARATH
Length = 1194
Score = 211 bits (537), Expect = 3e-53
Identities = 101/171 (59%), Positives = 125/171 (73%), Gaps = 11/171 (6%)
Frame = +2
Query: 11 GKFRMGTAFD-----GDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQ 175
G+F G+AF D++E + LV G+SYSGKD+ YSG +GEP+ AY+F GPI+YQ
Sbjct: 985 GRFHYGSAFGERSGHADKVETISATLVEKGFSYSGKDLLYSGISGEPVEAYIFMGPIYYQ 1044
Query: 176 KLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMH 355
KLKHMV DKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGASML+ ERLM
Sbjct: 1045 KLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYERLMI 1104
Query: 356 SSDVFTVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQ 490
SSD F V C CGLLGY K C C+ G ++ +++PYACKLLFQ
Sbjct: 1105 SSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 1155
[161][TOP]
>UniRef100_Q236N3 DNA-directed RNA polymerase n=1 Tax=Tetrahymena thermophila SB210
RepID=Q236N3_TETTH
Length = 1141
Score = 209 bits (531), Expect = 1e-52
Identities = 102/178 (57%), Positives = 131/178 (73%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G+F+ GTAF GD++ D + LV G+SY+GKD+ SG TGE ++ YVF GP+FYQ+L
Sbjct: 958 VLSGQFKYGTAFGGDKMADLSSILVQNGFSYTGKDVIISGITGEYMQCYVFCGPVFYQRL 1017
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DK+HARA+G LTRQPTEGR++DGGLRLGEMERD L+ + +S LL+ERLM SS
Sbjct: 1018 KHMVADKVHARAKGRVTTLTRQPTEGRAKDGGLRLGEMERDSLLAFASSNLLIERLMISS 1077
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
D F+V C CG + + C+ C+T VS + +PYACKLLFQEL MN+ P+L L D
Sbjct: 1078 DKFSVQVCEKCGFIQHTNSCKMCQTD-QVSKVVMPYACKLLFQELLSMNIKPKLNLVD 1134
[162][TOP]
>UniRef100_Q4MYU5 DNA-directed RNA polymerase n=1 Tax=Theileria parva
RepID=Q4MYU5_THEPA
Length = 1244
Score = 205 bits (521), Expect = 2e-51
Identities = 92/160 (57%), Positives = 122/160 (76%)
Frame = +2
Query: 44 DRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARG 223
+++ D + L+ G+ GK++ YSG +G P+ +F GPI+YQ+LKHMV DK+HAR RG
Sbjct: 1081 NKMSDICDILIKNGFHPKGKEILYSGISGNPINTLIFIGPIYYQRLKHMVTDKIHARGRG 1140
Query: 224 PRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLL 403
PR +TRQPTEGRSRDGGLRLGEMERDCLI YG+S LL+ERLM SSDVF + C +CG +
Sbjct: 1141 PRQPITRQPTEGRSRDGGLRLGEMERDCLIAYGSSNLLVERLMLSSDVFNIEVCSSCGFM 1200
Query: 404 GYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
GY +C++C+ +++ + +PYACKLLFQELQ MN+ P L
Sbjct: 1201 GYNNFCKFCQNN-SLAQVSLPYACKLLFQELQAMNIRPSL 1239
[163][TOP]
>UniRef100_A0D7M6 DNA-directed RNA polymerase n=1 Tax=Paramecium tetraurelia
RepID=A0D7M6_PARTE
Length = 1131
Score = 204 bits (520), Expect = 3e-51
Identities = 98/174 (56%), Positives = 122/174 (70%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
EGKF+ GTAF G+ + E L+ G+ Y GKD SG TGE + YV+ GPIFYQ+LKH
Sbjct: 947 EGKFKYGTAFGGENVLQVGEELLKRGFHYQGKDCLISGITGEYMECYVYQGPIFYQRLKH 1006
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV DK+HARA+GP LTRQP EGR++DGG R+GEMERDC + YGAS LL+ERL+ SSD
Sbjct: 1007 MVIDKIHARAKGPMEKLTRQPVEGRAKDGGQRIGEMERDCFLAYGASNLLIERLLISSDP 1066
Query: 368 FTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
F VY C CG+ C+ C T V +++PY CKLLFQEL MN+ P+L+L
Sbjct: 1067 FNVYVCEICGMFKSDSVCRGCNTD-KVYQIRLPYCCKLLFQELLAMNIKPKLQL 1119
[164][TOP]
>UniRef100_Q4UB41 DNA-directed RNA polymerase n=1 Tax=Theileria annulata
RepID=Q4UB41_THEAN
Length = 1244
Score = 204 bits (519), Expect = 4e-51
Identities = 93/160 (58%), Positives = 120/160 (75%)
Frame = +2
Query: 44 DRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARG 223
D + D L+ G+ GK++ YSG +G P+ +F GPI+YQ+LKHMV DK+HAR RG
Sbjct: 1081 DNMSDICNILIKNGFHPKGKEILYSGISGNPINTLIFIGPIYYQRLKHMVTDKIHARGRG 1140
Query: 224 PRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLL 403
PR +TRQPTEGRSRDGGLRLGEMERDCLI YG+S LL+ERLM SSDVF + C +CG +
Sbjct: 1141 PRQPITRQPTEGRSRDGGLRLGEMERDCLIAYGSSNLLIERLMLSSDVFNIEICTSCGFM 1200
Query: 404 GYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
GY +C++C+ +++ + +PYACKLLFQELQ MN+ P L
Sbjct: 1201 GYNNFCKFCQNN-SLAQVSLPYACKLLFQELQAMNIRPSL 1239
[165][TOP]
>UniRef100_C6LZ34 DNA-directed RNA polymerase n=1 Tax=Giardia intestinalis ATCC 50581
RepID=C6LZ34_GIALA
Length = 1239
Score = 199 bits (505), Expect = 2e-49
Identities = 97/173 (56%), Positives = 122/173 (70%), Gaps = 4/173 (2%)
Frame = +2
Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208
T D + I + ++L AAG+SYSGKD+ YSG TG+ + Y+F GPI+YQKLKHMVKDK+H
Sbjct: 1065 TKTDEEFIAELYDSLRAAGFSYSGKDVLYSGLTGDVIPVYIFNGPIYYQKLKHMVKDKIH 1124
Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388
+R GP +LTRQPTEGR GGLR+GEMERDC I YGAS LL+ER M SSD F Y C
Sbjct: 1125 SRGTGPITMLTRQPTEGRRVHGGLRMGEMERDCAISYGASALLLERFMLSSDEFLAYVCE 1184
Query: 389 TCGLLGYKG----WCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
CGL Y+ WC C++G V ++IPYA KL+ QEL M V+ R++L+D
Sbjct: 1185 ACGLFSYERNGALWCPTCQSGKDVVKIRIPYAAKLMIQELISMGVLVRMQLED 1237
[166][TOP]
>UniRef100_A8B2N4 DNA-directed RNA polymerase n=1 Tax=Giardia lamblia ATCC 50803
RepID=A8B2N4_GIALA
Length = 1238
Score = 197 bits (500), Expect = 6e-49
Identities = 96/173 (55%), Positives = 121/173 (69%), Gaps = 4/173 (2%)
Frame = +2
Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208
T D + + ++L AG+SYSGKD+ YSG TG+ + Y+F GPI+YQKLKHMVKDK+H
Sbjct: 1064 TKTDETFLAELYDSLRVAGFSYSGKDVLYSGLTGDVIPVYIFNGPIYYQKLKHMVKDKIH 1123
Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388
+R GP +LTRQPTEGR GGLR+GEMERDC I YGAS LL+ER M SSD F Y C
Sbjct: 1124 SRGTGPITMLTRQPTEGRRVHGGLRMGEMERDCAISYGASALLLERFMLSSDDFLAYVCE 1183
Query: 389 TCGLLGYKG----WCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
TCGL Y+ WC C++G V ++IPYA KL+ QEL M V+ R++L+D
Sbjct: 1184 TCGLFSYEKNGVLWCPTCQSGKDVVKIRIPYAAKLMIQELISMGVLVRMQLED 1236
[167][TOP]
>UniRef100_Q8SR75 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Encephalitozoon
cuniculi RepID=RPB2_ENCCU
Length = 1141
Score = 187 bits (476), Expect = 4e-46
Identities = 91/173 (52%), Positives = 116/173 (67%), Gaps = 4/173 (2%)
Frame = +2
Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208
T F G ++ + L + G+ G ++ Y+G TG LRA +F GP +YQ+LKHMV DK+H
Sbjct: 969 TPFSGVTVDGISSRLKSYGFQQRGLEVMYNGMTGRKLRAQMFFGPTYYQRLKHMVDDKIH 1028
Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388
ARARGP +LTRQP EGRSRDGGLR GEMERDC+I +GAS L ERLM SD ++ Y C
Sbjct: 1029 ARARGPLQILTRQPVEGRSRDGGLRFGEMERDCIISHGASAFLKERLMDVSDAYSCYVCD 1088
Query: 389 TCGLLGYKG----WCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
CGLL G C+ C VS ++IPYA KLL QEL GMN+ PR++ ++
Sbjct: 1089 FCGLLAMGGSKVNECKGCNNTTNVSMVEIPYAFKLLIQELMGMNIAPRIRFEE 1141
[168][TOP]
>UniRef100_A0RXX0 DNA-directed RNA polymerase, beta subunit/140 kD subunit n=1
Tax=Cenarchaeum symbiosum RepID=A0RXX0_CENSY
Length = 1115
Score = 187 bits (475), Expect = 5e-46
Identities = 91/176 (51%), Positives = 120/176 (68%), Gaps = 6/176 (3%)
Frame = +2
Query: 26 GTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKM 205
G+AF G+++E+ E + AG+ YSGK++ Y G TG+ VF G ++YQKL HMV DK+
Sbjct: 938 GSAFVGEKMEEVREVMDTAGFKYSGKEIMYDGRTGKAFPVEVFIGVVYYQKLHHMVADKI 997
Query: 206 HARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYAC 385
HARARG +LT+QPTEGR+R GGLR GEMERDCLI YGASM+L +RL+ SD +Y C
Sbjct: 998 HARARGQVQMLTKQPTEGRARGGGLRFGEMERDCLIAYGASMILKDRLLDESDKSDIYVC 1057
Query: 386 GTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
CGL+ Y K C+ C A VS++ + YA KLL QE+Q +NV PRL + +
Sbjct: 1058 ERCGLVAYHDVKQRKYVCRVCGDKAKVSSVSVAYAFKLLLQEMQSLNVAPRLLIKE 1113
[169][TOP]
>UniRef100_Q9CSL3 Putative uncharacterized protein (Fragment) n=1 Tax=Mus musculus
RepID=Q9CSL3_MOUSE
Length = 112
Score = 186 bits (473), Expect = 8e-46
Identities = 87/107 (81%), Positives = 95/107 (88%)
Frame = +2
Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388
ARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL+ERLM SSD F V CG
Sbjct: 1 ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG 60
Query: 389 TCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
CGLLGY GWC YC++ VS+L+IPYACKLLFQELQ MN++PRLKL
Sbjct: 61 QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKL 107
[170][TOP]
>UniRef100_A9A459 DNA-directed RNA polymerase n=1 Tax=Nitrosopumilus maritimus SCM1
RepID=A9A459_NITMS
Length = 1115
Score = 184 bits (468), Expect = 3e-45
Identities = 91/181 (50%), Positives = 122/181 (67%), Gaps = 6/181 (3%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
GK G+AF G+++++ E + A G+ YSGK++ Y G TG+ VF G ++YQKL HM
Sbjct: 933 GKRFDGSAFVGEKMDEVREVMDAHGFEYSGKEIMYDGRTGKSFPVEVFIGVVYYQKLHHM 992
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V DK+HARARG +LT+QPTEGR+R GGLR GEMERDCLI YGASM+L +RL+ SD
Sbjct: 993 VADKIHARARGQVQMLTKQPTEGRARGGGLRFGEMERDCLIAYGASMILKDRLLDESDKS 1052
Query: 371 TVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
++ C CGL+ Y K C+ C A VS++ + YA KLL QE+Q +NV PRL +
Sbjct: 1053 DIFVCERCGLVAYHDVKQRKYVCRVCGDKAKVSSVSVAYAFKLLLQEMQSLNVAPRLLIK 1112
Query: 533 D 535
+
Sbjct: 1113 E 1113
[171][TOP]
>UniRef100_B2W234 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2W234_PYRTR
Length = 1167
Score = 184 bits (467), Expect = 4e-45
Identities = 94/178 (52%), Positives = 114/178 (64%)
Frame = +2
Query: 2 VHEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
V G GTAF G +ED ++ LV G+SY+GKD SG TGE + Y F GPI+YQKL
Sbjct: 1008 VLNGTLEYGTAFGGSTVEDMSKILVDKGFSYTGKDYLTSGITGEAHQFYTFFGPIYYQKL 1067
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV+DKMH+RARGPRA+LTRQPTEGR+RDGGLRLGEMERDCLI YG
Sbjct: 1068 KHMVQDKMHSRARGPRAILTRQPTEGRARDGGLRLGEMERDCLIAYG------------- 1114
Query: 362 DVFTVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
G +GY G+C+ C + AV + +PYA KLL QEL MN+ + L+D
Sbjct: 1115 -----------GQMGYSGYCKLCESEKAVRKITMPYAAKLLIQELGSMNIKVTIGLED 1161
[172][TOP]
>UniRef100_Q4Z396 Putative uncharacterized protein n=1 Tax=Plasmodium berghei
RepID=Q4Z396_PLABE
Length = 209
Score = 182 bits (463), Expect = 1e-44
Identities = 90/184 (48%), Positives = 119/184 (64%), Gaps = 8/184 (4%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
EG T F +++ +E L GY G D+ Y+G G+ L + +F GP FYQ+LKH
Sbjct: 27 EGGEGDATPFSKITVQEISERLHRLGYEKYGNDILYNGHNGKMLTSKIFIGPTFYQRLKH 86
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV+DK+HAR+RGP ++TRQPTEGRSRDGGLR GEMERDC+I +G++ +L ERL SD
Sbjct: 87 MVEDKIHARSRGPLTMITRQPTEGRSRDGGLRFGEMERDCMISHGSAKMLKERLFEESDA 146
Query: 368 FTVYACGTCGLL--------GYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
+ V+ C TCGL Y+ C C + +S + IPYACKLLFQEL M + P+L
Sbjct: 147 YRVHVCDTCGLCCVADINKNAYE--CTICNSKTNISQIYIPYACKLLFQELMTMAIYPKL 204
Query: 524 KLDD 535
L+D
Sbjct: 205 VLED 208
[173][TOP]
>UniRef100_A9UUX4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis
RepID=A9UUX4_MONBE
Length = 1166
Score = 181 bits (460), Expect = 3e-44
Identities = 91/183 (49%), Positives = 115/183 (62%), Gaps = 6/183 (3%)
Frame = +2
Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184
H G T F + D A+ L + G ++ Y+G TG ++A VF GP +YQ+LK
Sbjct: 981 HSGTIGDATPFTKVNVTDVADILEGYNFQRYGNEVMYNGFTGRKMQAQVFLGPTYYQRLK 1040
Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364
HMV DK+HARARGP LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD
Sbjct: 1041 HMVDDKIHARARGPLQNLTRQPMEGRSRDGGLRFGEMERDCMIAHGAAQFLRERLFEVSD 1100
Query: 365 VFTVYACGTCG------LLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526
++++ C CG L + C CR VS +++PYACKLLFQEL M+VVPR+
Sbjct: 1101 PYSLHVCDVCGLPCVAKLEKNEFECTRCRNSTRVSRIRLPYACKLLFQELMTMSVVPRMM 1160
Query: 527 LDD 535
DD
Sbjct: 1161 TDD 1163
[174][TOP]
>UniRef100_Q1L5Z3 DNA-directed RNA polymerase n=1 Tax=Antirrhinum majus
RepID=Q1L5Z3_ANTMA
Length = 1198
Score = 181 bits (459), Expect = 3e-44
Identities = 88/183 (48%), Positives = 115/183 (62%), Gaps = 6/183 (3%)
Frame = +2
Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184
H GK T F +++ ++AL GY G + Y+G TG PL + +F GP +YQ+LK
Sbjct: 1004 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRPLTSMIFLGPTYYQRLK 1063
Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364
HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD
Sbjct: 1064 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1123
Query: 365 VFTVYACGTCGLLG------YKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526
+ V+ C CGL+G + C+ C+ + + IPYACKLL QEL M + PRL
Sbjct: 1124 AYRVHVCERCGLMGIANLKKHSYECRSCKNKTDIVQIYIPYACKLLIQELMSMAIAPRLL 1183
Query: 527 LDD 535
+D
Sbjct: 1184 TND 1186
[175][TOP]
>UniRef100_C4V8X8 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01
RepID=C4V8X8_NOSCE
Length = 1143
Score = 181 bits (459), Expect = 3e-44
Identities = 88/172 (51%), Positives = 114/172 (66%), Gaps = 4/172 (2%)
Frame = +2
Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208
T F+G +++ +E L Y G ++ Y+G TG LRA ++ GP +YQ+LKHMV DK+H
Sbjct: 972 TPFNGVTVDNISEKLKEYNYQQRGFEVMYNGMTGHKLRAQIYIGPTYYQRLKHMVDDKIH 1031
Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388
ARA+GP +LTRQP EGRSRDGGLR GEMERDC+I +GAS L ERLM SD +T C
Sbjct: 1032 ARAKGPLQILTRQPVEGRSRDGGLRFGEMERDCIISHGASAFLKERLMDVSDPYTCCICD 1091
Query: 389 TCGLLGYK----GWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
CGL+ C+ C +S ++IPYA KLL QEL GMN+ PR+K +
Sbjct: 1092 LCGLIAIDTKRYNECKGCNNRTNLSLVEIPYAFKLLIQELMGMNIAPRIKTE 1143
[176][TOP]
>UniRef100_Q7RQI2 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii
RepID=Q7RQI2_PLAYO
Length = 1312
Score = 180 bits (457), Expect = 6e-44
Identities = 89/184 (48%), Positives = 118/184 (64%), Gaps = 8/184 (4%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
EG T F +++ +E L GY G D+ Y+G G+ L + +F GP FYQ+LKH
Sbjct: 1130 EGGEGDATPFSKITVQEISERLHRLGYEKYGNDILYNGHNGKMLTSKIFIGPTFYQRLKH 1189
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV+DK+HAR+RGP ++TRQPTEGRSRDGGLR GEMERDC+I +G++ +L ERL SD
Sbjct: 1190 MVEDKIHARSRGPLTMITRQPTEGRSRDGGLRFGEMERDCMISHGSAKMLKERLFEESDA 1249
Query: 368 FTVYACGTCGLL--------GYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
+ V+ C CGL Y+ C C + +S + IPYACKLLFQEL M + P+L
Sbjct: 1250 YRVHVCDICGLCCVADINKNAYE--CTICNSKTNISQIYIPYACKLLFQELMTMAIYPKL 1307
Query: 524 KLDD 535
L+D
Sbjct: 1308 VLED 1311
[177][TOP]
>UniRef100_A5KBW7 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax
RepID=A5KBW7_PLAVI
Length = 1339
Score = 180 bits (457), Expect = 6e-44
Identities = 87/184 (47%), Positives = 120/184 (65%), Gaps = 8/184 (4%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
EG T F +++ ++ L + GY G D+ Y+G G+ L++ +F GP +YQ+LKH
Sbjct: 1157 EGGEGDATPFSRITVQEISQRLHSLGYEKYGNDVLYNGHNGKMLKSKIFIGPTYYQRLKH 1216
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV+DK+HAR+RGP ++TRQPTEGRSRDGGLR GEMERDC+I +G++ +L ERL SD
Sbjct: 1217 MVEDKIHARSRGPLTMITRQPTEGRSRDGGLRFGEMERDCMISHGSAKMLKERLFEESDA 1276
Query: 368 FTVYACGTCGLL--------GYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
+ V+ C CGL Y+ C C + +S + IPYACKLLFQEL M + P+L
Sbjct: 1277 YRVHVCDNCGLCCIADINKNAYE--CTVCNSKTNISQIYIPYACKLLFQELMTMAIYPKL 1334
Query: 524 KLDD 535
L+D
Sbjct: 1335 VLED 1338
[178][TOP]
>UniRef100_B1YC24 DNA-directed RNA polymerase n=1 Tax=Thermoproteus neutrophilus V24Sta
RepID=B1YC24_THENV
Length = 1127
Score = 179 bits (455), Expect = 1e-43
Identities = 93/175 (53%), Positives = 118/175 (67%), Gaps = 6/175 (3%)
Frame = +2
Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208
TAF+G + ED + L+ GY + GK++ YSG TGE L A +F G ++YQKL HMV DK+H
Sbjct: 950 TAFEGVKEEDLRKLLLKLGYKWDGKEVMYSGITGERLVADIFIGVVYYQKLHHMVADKIH 1009
Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388
ARARGP +LTRQPTEGRSR+GGLRLGEMERD LI +GAS LL ERL+ SSD +T+Y C
Sbjct: 1010 ARARGPVQILTRQPTEGRSREGGLRLGEMERDVLIAHGASALLYERLVESSDKYTMYVCE 1069
Query: 389 TCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
CGL Y K C + + +PYA KLL QEL + + P+L+L +
Sbjct: 1070 LCGLPAYLDAKSNKPKCPIHGDTGQFAKVVVPYAYKLLLQELIALGIYPKLELTE 1124
[179][TOP]
>UniRef100_P38420 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Arabidopsis
thaliana RepID=RPB2_ARATH
Length = 1188
Score = 179 bits (455), Expect = 1e-43
Identities = 87/179 (48%), Positives = 112/179 (62%), Gaps = 6/179 (3%)
Frame = +2
Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184
H GK T F +++ ++AL GY G + Y+G TG PL A +F GP +YQ+LK
Sbjct: 998 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFERMYNGHTGRPLTAMIFLGPTYYQRLK 1057
Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364
HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD
Sbjct: 1058 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1117
Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
+ V+ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+
Sbjct: 1118 AYRVHVCEVCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYACKLLFQELMSMAIAPRM 1176
[180][TOP]
>UniRef100_B3L0J5 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H
RepID=B3L0J5_PLAKH
Length = 1371
Score = 179 bits (454), Expect = 1e-43
Identities = 87/184 (47%), Positives = 119/184 (64%), Gaps = 8/184 (4%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
EG T F +++ ++ L GY G D+ Y+G G+ L++ +F GP +YQ+LKH
Sbjct: 1189 EGGEGDATPFSKITVQEISQRLHNLGYEKYGNDVLYNGHNGKMLKSKIFIGPTYYQRLKH 1248
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV+DK+HAR+RGP ++TRQPTEGRSRDGGLR GEMERDC+I +G++ +L ERL SD
Sbjct: 1249 MVEDKIHARSRGPLTMITRQPTEGRSRDGGLRFGEMERDCMISHGSAKMLKERLFEESDA 1308
Query: 368 FTVYACGTCGLL--------GYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
+ V+ C CGL Y+ C C + +S + IPYACKLLFQEL M + P+L
Sbjct: 1309 YRVHVCDNCGLCCIADINKNAYE--CTVCNSKTNISQIYIPYACKLLFQELMTMAIYPKL 1366
Query: 524 KLDD 535
L+D
Sbjct: 1367 VLED 1370
[181][TOP]
>UniRef100_Q0DQ04 DNA-directed RNA polymerase (Fragment) n=1 Tax=Oryza sativa
Japonica Group RepID=Q0DQ04_ORYSJ
Length = 368
Score = 178 bits (452), Expect = 2e-43
Identities = 87/183 (47%), Positives = 112/183 (61%), Gaps = 6/183 (3%)
Frame = +2
Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184
H GK T F +++ ++AL GY G + Y+G TG L A +F GP +YQ+LK
Sbjct: 176 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLK 235
Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364
HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD
Sbjct: 236 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAFFLKERLFDQSD 295
Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526
+ V+ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+
Sbjct: 296 AYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 355
Query: 527 LDD 535
D
Sbjct: 356 TQD 358
[182][TOP]
>UniRef100_B9FA12 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9FA12_ORYSJ
Length = 1218
Score = 178 bits (452), Expect = 2e-43
Identities = 87/183 (47%), Positives = 112/183 (61%), Gaps = 6/183 (3%)
Frame = +2
Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184
H GK T F +++ ++AL GY G + Y+G TG L A +F GP +YQ+LK
Sbjct: 1026 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLK 1085
Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364
HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD
Sbjct: 1086 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAFFLKERLFDQSD 1145
Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526
+ V+ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+
Sbjct: 1146 AYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1205
Query: 527 LDD 535
D
Sbjct: 1206 TQD 1208
[183][TOP]
>UniRef100_Q10G20 DNA-directed RNA polymerase n=2 Tax=Oryza sativa RepID=Q10G20_ORYSJ
Length = 1222
Score = 178 bits (452), Expect = 2e-43
Identities = 87/183 (47%), Positives = 112/183 (61%), Gaps = 6/183 (3%)
Frame = +2
Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184
H GK T F +++ ++AL GY G + Y+G TG L A +F GP +YQ+LK
Sbjct: 1030 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLK 1089
Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364
HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD
Sbjct: 1090 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAFFLKERLFDQSD 1149
Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526
+ V+ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+
Sbjct: 1150 AYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1209
Query: 527 LDD 535
D
Sbjct: 1210 TQD 1212
[184][TOP]
>UniRef100_Q963D7 RNA polymerase II subunit 2 (Fragment) n=1 Tax=Blepharisma
japonicum RepID=Q963D7_BLEJA
Length = 203
Score = 178 bits (452), Expect = 2e-43
Identities = 88/173 (50%), Positives = 111/173 (64%), Gaps = 7/173 (4%)
Frame = +2
Query: 26 GTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKM 205
GT F +ED + L A GY G ++ Y+G TG L + +F GP +YQ+LKHMV DK+
Sbjct: 26 GTPFQSVTVEDISRDLHALGYQLRGNEVMYNGHTGNRLASQIFFGPTYYQRLKHMVDDKI 85
Query: 206 HARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYAC 385
H+RARG LTRQPTEGRSRDGGLR GEMERDC+I +GA+ L ERL +SD + V+ C
Sbjct: 86 HSRARGQVQSLTRQPTEGRSRDGGLRFGEMERDCMISHGAARFLKERLFEASDAYRVHVC 145
Query: 386 GTCGLLGYKG------WCQYCRT-GAAVSALQIPYACKLLFQELQGMNVVPRL 523
CGL C+ C+ +S + IPYACKLLFQEL M++ PRL
Sbjct: 146 ENCGLFAIANLDRNMFQCKQCKNKNTRISQIFIPYACKLLFQELMAMHIAPRL 198
[185][TOP]
>UniRef100_A4WN98 DNA-directed RNA polymerase n=1 Tax=Pyrobaculum arsenaticum DSM 13514
RepID=A4WN98_PYRAR
Length = 1127
Score = 178 bits (452), Expect = 2e-43
Identities = 92/175 (52%), Positives = 117/175 (66%), Gaps = 6/175 (3%)
Frame = +2
Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208
T F+G + ED + L+ GY + GK++ YSG TGE L A +F G ++YQKL HMV DK+H
Sbjct: 950 TPFEGVKEEDLRKLLLKLGYKWDGKEVMYSGITGEKLVADIFIGIVYYQKLHHMVADKIH 1009
Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388
ARARGP +LTRQPTEGRSR+GGLRLGEMERD LI +GAS LL ERL+ SSD +T+Y C
Sbjct: 1010 ARARGPVQILTRQPTEGRSREGGLRLGEMERDVLIAHGASALLYERLVESSDKYTMYVCE 1069
Query: 389 TCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
CGL Y K C + + +PYA KLL QEL + + P+L+L +
Sbjct: 1070 LCGLPAYLDAKSNKPKCPIHGDTGQFAKVTVPYAFKLLLQELIALGIYPKLELSE 1124
[186][TOP]
>UniRef100_UPI0001926137 PREDICTED: similar to predicted protein n=1 Tax=Hydra magnipapillata
RepID=UPI0001926137
Length = 1426
Score = 178 bits (451), Expect = 3e-43
Identities = 88/182 (48%), Positives = 116/182 (63%), Gaps = 7/182 (3%)
Frame = +2
Query: 5 HEGKFRMGTAF-DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
++G+ T F D ++ + L GY G ++ Y+G TG L A VF GP +YQ+L
Sbjct: 997 NKGEIGDATPFNDAVNVQLVSSLLQEYGYHLRGNEVLYNGFTGRKLNAQVFLGPTYYQRL 1056
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DK+H+RARGP +LTRQP EGRSRDGGLR GEMERDC I +GA+ L ERL +S
Sbjct: 1057 KHMVDDKIHSRARGPVQILTRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLNERLFEAS 1116
Query: 362 DVFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
D + V+ C CGL+ C+ C+ VS ++IPYACKLLFQEL M++ PR+
Sbjct: 1117 DAYRVHVCNLCGLIAIANLRNNTFECRSCKNKTQVSQIRIPYACKLLFQELMSMSIAPRM 1176
Query: 524 KL 529
+
Sbjct: 1177 MI 1178
[187][TOP]
>UniRef100_O96236 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7
RepID=O96236_PLAF7
Length = 1340
Score = 178 bits (451), Expect = 3e-43
Identities = 86/184 (46%), Positives = 118/184 (64%), Gaps = 8/184 (4%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
EG T F +++ ++ L GY G +M Y+G G L++ +F GP +YQ+LKH
Sbjct: 1158 EGGEGDATPFSKITVQEISQKLHNLGYEKYGNEMLYNGHNGRMLKSKIFIGPTYYQRLKH 1217
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV+DK+HAR+RGP ++TRQPTEGRSRDGGLR GEMERDC+I +G++ +L ERL SD
Sbjct: 1218 MVEDKIHARSRGPLTMITRQPTEGRSRDGGLRFGEMERDCMISHGSAKMLKERLFEESDA 1277
Query: 368 FTVYACGTCGLL--------GYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
+ V+ C CGL Y+ C C + +S + +PYACKLLFQEL M + P+L
Sbjct: 1278 YRVHVCDNCGLCCIADINKNAYE--CTVCNSKTNISQIYLPYACKLLFQELMTMAIYPKL 1335
Query: 524 KLDD 535
L+D
Sbjct: 1336 VLED 1339
[188][TOP]
>UniRef100_Q5KIB7 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q5KIB7_CRYNE
Length = 1193
Score = 178 bits (451), Expect = 3e-43
Identities = 87/171 (50%), Positives = 110/171 (64%), Gaps = 6/171 (3%)
Frame = +2
Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208
T F +E ++ L A GY G ++ Y G TG L+A V+ GP +YQ+LKHMV DK+H
Sbjct: 1018 TPFTELTVEAVSKVLRAKGYQSRGFEVLYHGHTGRKLQAQVYFGPTYYQRLKHMVDDKIH 1077
Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388
ARARGP +LTRQP EGRSRDGGLR GEMERDC+I +G + L ER+ SSD F ++ C
Sbjct: 1078 ARARGPLQILTRQPVEGRSRDGGLRFGEMERDCMISHGIAGFLKERMYDSSDAFRIHVCD 1137
Query: 389 TCGLLGYKG------WCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
CGL+ +C CR +S + IPYA KLLFQELQ MN+ R+
Sbjct: 1138 VCGLMAVANLKKQEFYCSVCRNSTQISQVYIPYAAKLLFQELQAMNIACRM 1188
[189][TOP]
>UniRef100_Q55U25 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q55U25_CRYNE
Length = 1245
Score = 178 bits (451), Expect = 3e-43
Identities = 87/171 (50%), Positives = 110/171 (64%), Gaps = 6/171 (3%)
Frame = +2
Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208
T F +E ++ L A GY G ++ Y G TG L+A V+ GP +YQ+LKHMV DK+H
Sbjct: 1070 TPFTELTVEAVSKVLRAKGYQSRGFEVLYHGHTGRKLQAQVYFGPTYYQRLKHMVDDKIH 1129
Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388
ARARGP +LTRQP EGRSRDGGLR GEMERDC+I +G + L ER+ SSD F ++ C
Sbjct: 1130 ARARGPLQILTRQPVEGRSRDGGLRFGEMERDCMISHGIAGFLKERMYDSSDAFRIHVCD 1189
Query: 389 TCGLLGYKG------WCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
CGL+ +C CR +S + IPYA KLLFQELQ MN+ R+
Sbjct: 1190 VCGLMAVANLKKQEFYCSVCRNSTQISQVYIPYAAKLLFQELQAMNIACRM 1240
[190][TOP]
>UniRef100_C5NSA9 DNA-directed RNA polymerase n=1 Tax=Haladaptatus paucihalophilus
RepID=C5NSA9_9EURY
Length = 608
Score = 178 bits (451), Expect = 3e-43
Identities = 86/182 (47%), Positives = 118/182 (64%), Gaps = 6/182 (3%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
EG+ GTAF G+ E+ AL GY SGK++ YSG TGE + A +F G I Y KL H
Sbjct: 425 EGRRVDGTAFSGEDKEELRSALQERGYKSSGKEIMYSGVTGEKIEAEIFVGTILYHKLYH 484
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV +K+HAR+RGP +LTRQPTEGR+R+GGLR+G MERDC +G+GA++ L ERL+ SSD
Sbjct: 485 MVSNKLHARSRGPVQVLTRQPTEGRAREGGLRIGTMERDCFVGHGAALALKERLLDSSDR 544
Query: 368 FTVYACGTCGLLGYKG------WCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
+Y CG CG+ + +C C + + + YA KLL E++ + + PRL+L
Sbjct: 545 EWIYVCGQCGMSAVENIDQNRVYCPNCEEETDIHEIDMSYAFKLLLDEMKALGIAPRLEL 604
Query: 530 DD 535
+D
Sbjct: 605 ED 606
[191][TOP]
>UniRef100_A9SJE5 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9SJE5_PHYPA
Length = 1185
Score = 177 bits (450), Expect = 4e-43
Identities = 85/179 (47%), Positives = 113/179 (63%), Gaps = 6/179 (3%)
Frame = +2
Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184
H GK T F +++ ++AL GY G ++ Y+G TG L A++F GP +YQ+LK
Sbjct: 990 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFEVMYNGHTGRRLTAHIFLGPTYYQRLK 1049
Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364
HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD
Sbjct: 1050 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1109
Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
+ V+ C CG++ C+ C+ + + IPYACKLLFQEL M + PR+
Sbjct: 1110 AYRVHVCEHCGIIAIANLKKNTYECRGCKNNTDIVQVHIPYACKLLFQELMSMAIAPRM 1168
[192][TOP]
>UniRef100_Q1L5B4 DNA-directed RNA polymerase n=1 Tax=Rhododendron macrophyllum
RepID=Q1L5B4_RHOMC
Length = 1207
Score = 177 bits (449), Expect = 5e-43
Identities = 86/183 (46%), Positives = 112/183 (61%), Gaps = 6/183 (3%)
Frame = +2
Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184
H GK T F +++ ++AL GY G + Y+G TG PL +F GP +YQ+LK
Sbjct: 1015 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFERMYNGHTGRPLTYTIFLGPTYYQRLK 1074
Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364
HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD
Sbjct: 1075 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1134
Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526
+ V+ C CG++ C++C+ + + IPYACKLL QEL M + PRL
Sbjct: 1135 AYRVHVCALCGIVAIANLKKNSFECRHCKNKTDIVQVYIPYACKLLLQELMAMAIAPRLL 1194
Query: 527 LDD 535
D
Sbjct: 1195 TKD 1197
[193][TOP]
>UniRef100_Q6CWA5 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
RepID=Q6CWA5_KLULA
Length = 1221
Score = 177 bits (449), Expect = 5e-43
Identities = 86/168 (51%), Positives = 111/168 (66%), Gaps = 7/168 (4%)
Frame = +2
Query: 50 IEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPR 229
++ + L GY G ++ Y+G TG+ L A +F GP +YQ+L+HMV DK+HARARGP
Sbjct: 1049 VDGISRLLREHGYQSRGFEVMYNGHTGKKLMAQIFFGPTYYQRLRHMVDDKIHARARGPM 1108
Query: 230 ALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGY 409
+LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG CGL+
Sbjct: 1109 QVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAAFLKERLMEASDAFRVHICGICGLMSV 1168
Query: 410 -------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
+ C+ C+ + + IPYA KLLFQEL MN+ PRL D
Sbjct: 1169 VAKLKHNQFECRSCKNKIDIYQVHIPYAAKLLFQELMAMNIAPRLYTD 1216
[194][TOP]
>UniRef100_C4QZQ7 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4QZQ7_PICPG
Length = 1227
Score = 177 bits (449), Expect = 5e-43
Identities = 89/172 (51%), Positives = 112/172 (65%), Gaps = 7/172 (4%)
Frame = +2
Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208
T F ++ + L GY G ++ Y+G TG+ L A VF GP +YQ+L+HMV DK+H
Sbjct: 1045 TPFTDLTVDAVSNLLRDNGYQSRGFEVMYNGHTGKKLMAQVFFGPTYYQRLRHMVDDKIH 1104
Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388
ARARGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG
Sbjct: 1105 ARARGPVQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAGFLKERLMEASDAFRVHVCG 1164
Query: 389 TCGLLGY-------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
CGL+ + C+ C+ + L IPYA KLLFQEL MN+ PRL
Sbjct: 1165 ICGLMSVIANLKKNQFECRSCKNKTNIYQLHIPYAAKLLFQELMAMNIAPRL 1216
[195][TOP]
>UniRef100_C5NSD0 DNA-directed RNA polymerase n=1 Tax=Halococcus salifodinae
RepID=C5NSD0_9EURY
Length = 608
Score = 177 bits (449), Expect = 5e-43
Identities = 89/182 (48%), Positives = 121/182 (66%), Gaps = 6/182 (3%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
EG+ GTAF G+ E+ +L G+ SGK++ YSG TGE + A +F G IFYQKL H
Sbjct: 425 EGRRVDGTAFTGEDEEELRGSLEEHGFDSSGKEIMYSGVTGEKIDAEIFVGTIFYQKLYH 484
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV +K+HAR+RGP +LTRQPTEGR+R+GGLR+GEMERD LIG+GA+M L ERL+ SD
Sbjct: 485 MVSNKIHARSRGPVQVLTRQPTEGRAREGGLRVGEMERDVLIGHGAAMALKERLLDESDR 544
Query: 368 FTVYACGTCGLLGYKG------WCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
VY CG CG+ + +C C + +++ YA KLL E++ + + PRL+L
Sbjct: 545 EFVYVCGECGMSAVENVEQRRVYCPNCGEETEIHEIEMSYAFKLLLDEMKALGIAPRLEL 604
Query: 530 DD 535
+D
Sbjct: 605 ED 606
[196][TOP]
>UniRef100_C5NSC9 DNA-directed RNA polymerase n=1 Tax=Halococcus saccharolyticus
RepID=C5NSC9_9EURY
Length = 608
Score = 177 bits (449), Expect = 5e-43
Identities = 89/182 (48%), Positives = 121/182 (66%), Gaps = 6/182 (3%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
EG+ GTAF G+ E+ +L G+ SGK++ YSG TGE + A +F G IFYQKL H
Sbjct: 425 EGRRVDGTAFTGEDEEELRGSLEEHGFDSSGKEIMYSGVTGEKIDAEIFVGTIFYQKLYH 484
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV +K+HAR+RGP +LTRQPTEGR+R+GGLR+GEMERD LIG+GA+M L ERL+ SD
Sbjct: 485 MVSNKIHARSRGPVQVLTRQPTEGRAREGGLRVGEMERDVLIGHGAAMALKERLLDESDR 544
Query: 368 FTVYACGTCGLLGYKG------WCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
VY CG CG+ + +C C + +++ YA KLL E++ + + PRL+L
Sbjct: 545 EFVYVCGECGMSAVENVEQRRVYCPNCGEETEIHEIEMSYAFKLLLDEMKALGIAPRLEL 604
Query: 530 DD 535
+D
Sbjct: 605 ED 606
[197][TOP]
>UniRef100_Q6FLD5 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Candida glabrata
RepID=RPB2_CANGA
Length = 1223
Score = 177 bits (449), Expect = 5e-43
Identities = 87/168 (51%), Positives = 111/168 (66%), Gaps = 7/168 (4%)
Frame = +2
Query: 50 IEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPR 229
+E ++ L GY G ++ Y+G TG+ L A +F GP +YQ+L+HMV DK+HARARGP
Sbjct: 1051 VEGISKLLREHGYQSRGFEVMYNGHTGKKLMAQIFFGPTYYQRLRHMVDDKIHARARGPM 1110
Query: 230 ALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGY 409
+LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG CGL+
Sbjct: 1111 QVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAAFLKERLMEASDAFRVHICGICGLMSV 1170
Query: 410 -------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
+ C+ C + + IPYA KLLFQEL MN+ PRL D
Sbjct: 1171 IAKLNHNQFECKGCDNKIDIYQIHIPYAAKLLFQELMAMNITPRLYTD 1218
[198][TOP]
>UniRef100_Q1L5Z0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nicotiana sylvestris
RepID=Q1L5Z0_NICSY
Length = 1087
Score = 177 bits (448), Expect = 6e-43
Identities = 87/183 (47%), Positives = 112/183 (61%), Gaps = 6/183 (3%)
Frame = +2
Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184
H GK T F +++ ++AL GY G + Y+G TG L A +F GP +YQ+LK
Sbjct: 900 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLK 959
Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364
HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD
Sbjct: 960 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1019
Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526
+ V+ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+
Sbjct: 1020 AYRVHVCERCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1079
Query: 527 LDD 535
D
Sbjct: 1080 TKD 1082
[199][TOP]
>UniRef100_Q1ANF2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Spirogyra sp. UWCC
FW670 RepID=Q1ANF2_9VIRI
Length = 670
Score = 177 bits (448), Expect = 6e-43
Identities = 86/181 (47%), Positives = 113/181 (62%), Gaps = 6/181 (3%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
GK T F ++ + AL + GY G ++ Y+G TG L+A++F GP +YQ+LKHM
Sbjct: 483 GKEGDATPFTDVTVDSISRALHSCGYQMRGFEVMYNGHTGRKLQAHIFLGPTYYQRLKHM 542
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD +
Sbjct: 543 VDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAY 602
Query: 371 TVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
V+ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+
Sbjct: 603 RVHVCEHCGLIANANLKKSFFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMMTR 662
Query: 533 D 535
D
Sbjct: 663 D 663
[200][TOP]
>UniRef100_B9RZ91 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9RZ91_RICCO
Length = 1194
Score = 177 bits (448), Expect = 6e-43
Identities = 87/183 (47%), Positives = 112/183 (61%), Gaps = 6/183 (3%)
Frame = +2
Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184
H GK T F +++ ++AL GY G + Y+G TG L A +F GP +YQ+LK
Sbjct: 1000 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLK 1059
Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364
HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD
Sbjct: 1060 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1119
Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526
+ V+ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+
Sbjct: 1120 AYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1179
Query: 527 LDD 535
D
Sbjct: 1180 TKD 1182
[201][TOP]
>UniRef100_B9H2V3 DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa
RepID=B9H2V3_POPTR
Length = 421
Score = 177 bits (448), Expect = 6e-43
Identities = 87/183 (47%), Positives = 112/183 (61%), Gaps = 6/183 (3%)
Frame = +2
Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184
H GK T F +++ ++AL GY G + Y+G TG L A +F GP +YQ+LK
Sbjct: 227 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLK 286
Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364
HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD
Sbjct: 287 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 346
Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526
+ V+ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+
Sbjct: 347 AYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 406
Query: 527 LDD 535
D
Sbjct: 407 TKD 409
[202][TOP]
>UniRef100_Q5D921 SJCHGC09486 protein (Fragment) n=1 Tax=Schistosoma japonicum
RepID=Q5D921_SCHJA
Length = 204
Score = 177 bits (448), Expect = 6e-43
Identities = 84/185 (45%), Positives = 118/185 (63%), Gaps = 7/185 (3%)
Frame = +2
Query: 5 HEGKFRMGTAF-DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
++G+ T F D + + L GY ++G ++ Y+G TG L + +F GP +YQ+L
Sbjct: 17 NKGEIGDATPFNDAVNVRKISLLLQEYGYQHTGNEIMYNGFTGRKLNSQIFLGPTYYQRL 76
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DK+H+R+RGP +L RQP EGRSRDGGLR GEMERDC I +GA+ L ERL +S
Sbjct: 77 KHMVDDKIHSRSRGPVQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFFAS 136
Query: 362 DVFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
D + VY C CGL+ C+ C+ +S +++PYACKLLFQEL M++ PR+
Sbjct: 137 DPYQVYVCNLCGLIAIAHQRNKTYECRSCKNTTQISLVKLPYACKLLFQELMSMSIAPRM 196
Query: 524 KLDDP 538
++ P
Sbjct: 197 MINSP 201
[203][TOP]
>UniRef100_C4Q1D7 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni
RepID=C4Q1D7_SCHMA
Length = 1304
Score = 177 bits (448), Expect = 6e-43
Identities = 84/185 (45%), Positives = 118/185 (63%), Gaps = 7/185 (3%)
Frame = +2
Query: 5 HEGKFRMGTAF-DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
++G+ T F D + + L GY ++G ++ Y+G TG L + +F GP +YQ+L
Sbjct: 1117 NKGEIGDATPFNDAVNVRKISLLLQEYGYQHTGNEIMYNGFTGRKLNSQIFLGPTYYQRL 1176
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DK+H+R+RGP +L RQP EGRSRDGGLR GEMERDC I +GA+ L ERL +S
Sbjct: 1177 KHMVDDKIHSRSRGPVQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFFAS 1236
Query: 362 DVFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
D + VY C CGL+ C+ C+ +S +++PYACKLLFQEL M++ PR+
Sbjct: 1237 DPYQVYVCNLCGLIAIAHQRNKTYECRSCKNTTQISLVKLPYACKLLFQELMSMSIAPRM 1296
Query: 524 KLDDP 538
++ P
Sbjct: 1297 MINSP 1301
[204][TOP]
>UniRef100_C5MEG3 DNA-directed RNA polymerase n=1 Tax=Candida tropicalis MYA-3404
RepID=C5MEG3_CANTT
Length = 1240
Score = 177 bits (448), Expect = 6e-43
Identities = 91/179 (50%), Positives = 115/179 (64%), Gaps = 14/179 (7%)
Frame = +2
Query: 29 TAFDGDR-------IEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
+ F+GD E A+ L GY G ++ Y+G TG+ L A VF GP +YQ+L+H
Sbjct: 1051 SGFEGDASPFTDVTAEAIAKLLREHGYQSRGFEVMYNGHTGKKLMAQVFFGPTYYQRLRH 1110
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV DK+HARARGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD
Sbjct: 1111 MVDDKIHARARGPVQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAGFLKERLMEASDA 1170
Query: 368 FTVYACGTCGLLGY-------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
F V+ CG CGL+ + C+ C+ + + IPYA KLLFQEL MN+ PRL
Sbjct: 1171 FRVHVCGMCGLMSVIANLKKNQFECRSCKNKTNIYQIHIPYAAKLLFQELMAMNISPRL 1229
[205][TOP]
>UniRef100_Q42877 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Solanum
lycopersicum RepID=RPB2_SOLLC
Length = 1191
Score = 177 bits (448), Expect = 6e-43
Identities = 87/183 (47%), Positives = 112/183 (61%), Gaps = 6/183 (3%)
Frame = +2
Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184
H GK T F +++ ++AL GY G + Y+G TG L A +F GP +YQ+LK
Sbjct: 997 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLK 1056
Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364
HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD
Sbjct: 1057 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1116
Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526
+ V+ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+
Sbjct: 1117 AYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1176
Query: 527 LDD 535
D
Sbjct: 1177 TKD 1179
[206][TOP]
>UniRef100_Q1L5Y9 DNA-directed RNA polymerase n=1 Tax=Petunia x hybrida
RepID=Q1L5Y9_PETHY
Length = 1195
Score = 176 bits (447), Expect = 8e-43
Identities = 87/183 (47%), Positives = 112/183 (61%), Gaps = 6/183 (3%)
Frame = +2
Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184
H GK T F +++ ++AL GY G + Y+G TG L A +F GP +YQ+LK
Sbjct: 1001 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLPAMIFLGPTYYQRLK 1060
Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364
HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD
Sbjct: 1061 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1120
Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526
+ V+ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+
Sbjct: 1121 AYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1180
Query: 527 LDD 535
D
Sbjct: 1181 TKD 1183
[207][TOP]
>UniRef100_A9BK45 DNA-directed RNA polymerase n=1 Tax=Cryptophyta RepID=A9BK45_9CRYP
Length = 1100
Score = 176 bits (447), Expect = 8e-43
Identities = 93/171 (54%), Positives = 115/171 (67%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
GKF GT F +I + L AGYS GK+ F+SG TG P+ VF+GP+FYQKLKHM
Sbjct: 928 GKFIDGTPFIESKIAKIKKKLKIAGYSSEGKEFFFSGITGVPMLMDVFSGPVFYQKLKHM 987
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
VKDK+HAR +GP + +TRQP EGRSR GGLR GEMERDCLI YGAS ++ERL+ SSD+
Sbjct: 988 VKDKIHARGKGPCSNITRQPIEGRSRGGGLRFGEMERDCLISYGASEAIIERLLISSDLT 1047
Query: 371 TVYACGTCGLLGYKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
G K + + +L++PYACKLLFQELQ MN++PRL
Sbjct: 1048 QANFDLHTGFFTDK------KKSLNIVSLKLPYACKLLFQELQSMNILPRL 1092
[208][TOP]
>UniRef100_A7TTM7 DNA-directed RNA polymerase n=1 Tax=Vanderwaltozyma polyspora DSM
70294 RepID=A7TTM7_VANPO
Length = 1223
Score = 176 bits (447), Expect = 8e-43
Identities = 87/168 (51%), Positives = 111/168 (66%), Gaps = 7/168 (4%)
Frame = +2
Query: 50 IEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPR 229
+E ++ L GY G ++ Y+G TG+ L A +F GP +YQ+L+HMV DK+HARARGP
Sbjct: 1051 VEGISKLLREHGYQSRGFEVMYNGHTGKKLMAQIFFGPTYYQRLRHMVDDKIHARARGPM 1110
Query: 230 ALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGY 409
+LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG CGL+
Sbjct: 1111 QVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAASFLKERLMEASDAFRVHICGICGLMTV 1170
Query: 410 -------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
+ C+ C + + IPYA KLLFQEL MN+ PRL D
Sbjct: 1171 IAKLNHNQFECKGCDNKIDIYQIHIPYAAKLLFQELMAMNITPRLYAD 1218
[209][TOP]
>UniRef100_A5DVP4 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
RepID=A5DVP4_LODEL
Length = 1238
Score = 176 bits (447), Expect = 8e-43
Identities = 87/164 (53%), Positives = 110/164 (67%), Gaps = 7/164 (4%)
Frame = +2
Query: 53 EDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPRA 232
E ++ L GY G ++ Y+G TG+ L A VF GP +YQ+L+HMV DK+HARARGP
Sbjct: 1064 EAVSKLLREHGYQSRGFEVMYNGHTGKKLMAQVFFGPTYYQRLRHMVDDKIHARARGPVQ 1123
Query: 233 LLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGY- 409
+LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG CGL+
Sbjct: 1124 VLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAGFLKERLMEASDAFRVHVCGVCGLMSVI 1183
Query: 410 ------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
+ C+ C+ + + IPYA KLLFQEL MN+ PRL
Sbjct: 1184 ANLKKNQFECRSCKNKTNIYQIHIPYAAKLLFQELMAMNITPRL 1227
[210][TOP]
>UniRef100_Q3IUN3 DNA-directed RNA polymerase n=1 Tax=Natronomonas pharaonis DSM 2160
RepID=Q3IUN3_NATPD
Length = 610
Score = 176 bits (447), Expect = 8e-43
Identities = 85/182 (46%), Positives = 121/182 (66%), Gaps = 6/182 (3%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
EG+ GT F G+ ++ E+L+ G+ +GK++ YSG TGE + A +F G IFYQKL H
Sbjct: 427 EGRRVDGTPFQGEDEDELRESLIDRGFKSNGKEVMYSGITGEKIEAEIFVGVIFYQKLYH 486
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV +K+HAR+RGP +LTRQPTEGR+R+GGLR+GEMERD IG+GA+M L ERL+ SD
Sbjct: 487 MVSNKLHARSRGPVQVLTRQPTEGRAREGGLRIGEMERDVFIGHGAAMTLKERLLDESDR 546
Query: 368 FTVYACGTCGLLGYKG------WCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
+Y CG CG+ + +C C V +++ YA KLL E++ + + PR++L
Sbjct: 547 EDIYVCGQCGMSAVENVEQRRVYCPNCDEETDVHEVEMSYAFKLLLDEMKALGIAPRIEL 606
Query: 530 DD 535
+D
Sbjct: 607 ED 608
[211][TOP]
>UniRef100_A1RSE9 DNA-directed RNA polymerase n=1 Tax=Pyrobaculum islandicum DSM 4184
RepID=A1RSE9_PYRIL
Length = 1127
Score = 176 bits (447), Expect = 8e-43
Identities = 91/175 (52%), Positives = 117/175 (66%), Gaps = 6/175 (3%)
Frame = +2
Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208
T F+G + E+ + L+ GY + GK++ YSG TGE L A +F G ++YQKL HMV DK+H
Sbjct: 950 TPFEGVKEEELRKLLMKLGYKWDGKEVMYSGITGEKLVADIFIGVVYYQKLHHMVADKIH 1009
Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388
ARARGP +LTRQPTEGRSR+GGLRLGEMERD LI +GAS LL ERL+ SSD +T+Y C
Sbjct: 1010 ARARGPVQILTRQPTEGRSREGGLRLGEMERDVLIAHGASALLYERLVESSDKYTMYVCE 1069
Query: 389 TCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
CGL Y K C + + +PYA KLL QEL + + P+L+L +
Sbjct: 1070 LCGLPAYLDARTNKPRCPIHGDTGQFAKVIVPYAFKLLLQELIALGIYPKLELSE 1124
[212][TOP]
>UniRef100_B3T8B0 DNA-directed RNA polymerase n=1 Tax=uncultured marine crenarchaeote
HF4000_APKG5C13 RepID=B3T8B0_9ARCH
Length = 1114
Score = 176 bits (447), Expect = 8e-43
Identities = 83/175 (47%), Positives = 117/175 (66%), Gaps = 6/175 (3%)
Frame = +2
Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208
+AF G+++++ L AG+ YSGK++ Y G TG+ VF G ++YQKL HMV DK+H
Sbjct: 938 SAFVGEKVDEVKSVLEDAGFKYSGKEIMYDGRTGKQFPVEVFIGVVYYQKLHHMVADKIH 997
Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388
ARARG +LT+QPTEGR+R GGLR GEMERDC+I YGASM+L +RL+ SD ++ C
Sbjct: 998 ARARGQVQMLTKQPTEGRARGGGLRFGEMERDCIIAYGASMILKDRLLDESDKSDIFVCE 1057
Query: 389 TCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
CGL+ Y + +C+ C VS++ + YA KLL QE+ +N+ PRL + +
Sbjct: 1058 RCGLVAYHDIKQRRFYCRVCDKKGKVSSVSVAYAFKLLLQEMSCLNIAPRLLIKE 1112
[213][TOP]
>UniRef100_P08518 DNA-directed RNA polymerase II subunit RPB2 n=4 Tax=Saccharomyces
cerevisiae RepID=RPB2_YEAST
Length = 1224
Score = 176 bits (447), Expect = 8e-43
Identities = 87/168 (51%), Positives = 111/168 (66%), Gaps = 7/168 (4%)
Frame = +2
Query: 50 IEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPR 229
+E ++ L GY G ++ Y+G TG+ L A +F GP +YQ+L+HMV DK+HARARGP
Sbjct: 1052 VEGISKLLREHGYQSRGFEVMYNGHTGKKLMAQIFFGPTYYQRLRHMVDDKIHARARGPM 1111
Query: 230 ALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGY 409
+LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG CGL+
Sbjct: 1112 QVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAASFLKERLMEASDAFRVHICGICGLMTV 1171
Query: 410 -------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
+ C+ C + + IPYA KLLFQEL MN+ PRL D
Sbjct: 1172 IAKLNHNQFECKGCDNKIDIYQIHIPYAAKLLFQELMAMNITPRLYTD 1219
[214][TOP]
>UniRef100_Q753Q4 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Eremothecium
gossypii RepID=RPB2_ASHGO
Length = 1222
Score = 176 bits (447), Expect = 8e-43
Identities = 86/168 (51%), Positives = 112/168 (66%), Gaps = 7/168 (4%)
Frame = +2
Query: 50 IEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPR 229
++ ++ L GY G ++ Y+G TG+ L A +F GP +YQ+L+HMV DK+HARARGP
Sbjct: 1050 VDGISKLLREHGYQSRGFEVMYNGHTGKKLMAQIFFGPTYYQRLRHMVDDKIHARARGPM 1109
Query: 230 ALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGY 409
+LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG CGL+
Sbjct: 1110 QVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAAFLKERLMEASDAFRVHICGICGLMTV 1169
Query: 410 -------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
+ C+ C+ + + IPYA KLLFQEL MN+ PRL D
Sbjct: 1170 VAKLKHNQFECRGCKNKIDIYQVHIPYAAKLLFQELMAMNIAPRLYTD 1217
[215][TOP]
>UniRef100_A7PJ31 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7PJ31_VITVI
Length = 1220
Score = 176 bits (446), Expect = 1e-42
Identities = 86/179 (48%), Positives = 111/179 (62%), Gaps = 6/179 (3%)
Frame = +2
Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184
H GK T F +++ ++AL GY G + Y+G TG L A +F GP +YQ+LK
Sbjct: 1026 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLK 1085
Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364
HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD
Sbjct: 1086 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1145
Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
+ V+ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+
Sbjct: 1146 AYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM 1204
[216][TOP]
>UniRef100_A5C1N0 DNA-directed RNA polymerase n=2 Tax=Vitis RepID=A5C1N0_VITVI
Length = 1193
Score = 176 bits (446), Expect = 1e-42
Identities = 86/179 (48%), Positives = 111/179 (62%), Gaps = 6/179 (3%)
Frame = +2
Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184
H GK T F +++ ++AL GY G + Y+G TG L A +F GP +YQ+LK
Sbjct: 999 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLK 1058
Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364
HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD
Sbjct: 1059 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1118
Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
+ V+ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+
Sbjct: 1119 AYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM 1177
[217][TOP]
>UniRef100_Q6CAD6 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6CAD6_YARLI
Length = 1229
Score = 176 bits (446), Expect = 1e-42
Identities = 86/175 (49%), Positives = 113/175 (64%), Gaps = 7/175 (4%)
Frame = +2
Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208
T F ++ ++ L + GY G ++ Y G TG+ + A F GP +YQ+L+HMV DK+H
Sbjct: 1047 TPFTDVTVDAISKLLRSHGYQSRGFEVMYHGHTGKKIMAQCFLGPTYYQRLRHMVDDKIH 1106
Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388
ARARGP +LTRQP EGRSR+GGLR GEMERDC+I +GA+ L ERLM +SD F ++ CG
Sbjct: 1107 ARARGPVQILTRQPVEGRSREGGLRFGEMERDCMIAHGAAAFLKERLMEASDAFRIHVCG 1166
Query: 389 TCGLLGY-------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
CG + + C+ CR + +QIPYA KLLFQEL MN+ PRL D
Sbjct: 1167 VCGSMNVIANLKKNQFECRSCRNKTKIYQVQIPYAAKLLFQELMAMNIAPRLFSD 1221
[218][TOP]
>UniRef100_Q2VA54 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum
RepID=Q2VA54_PHANO
Length = 1262
Score = 176 bits (446), Expect = 1e-42
Identities = 87/175 (49%), Positives = 114/175 (65%), Gaps = 7/175 (4%)
Frame = +2
Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208
T F +++ ++ L AGY G ++ Y+G TG+ +R VF GP +YQ+L+HMV DK+H
Sbjct: 1080 TPFTEVTVDEISDLLEQAGYQKRGFEIMYNGHTGKKMRVQVFLGPTYYQRLRHMVDDKIH 1139
Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388
ARARGP +LTRQP EGR+RDGGLR GEMERDC+I +GA+ L ERL SD +TV+ C
Sbjct: 1140 ARARGPLQILTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFTVSDAYTVHVCD 1199
Query: 389 TCGLLG-----YKGW--CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
CGL+ KG C+ C +S + IPYA KLLFQEL MN+ R+ D
Sbjct: 1200 ICGLMSPIASIKKGMYECRPCHNKTRISQIHIPYAAKLLFQELLAMNIATRMFTD 1254
[219][TOP]
>UniRef100_Q1HDK3 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria sp. S-93-48
RepID=Q1HDK3_9PLEO
Length = 1262
Score = 176 bits (446), Expect = 1e-42
Identities = 87/175 (49%), Positives = 114/175 (65%), Gaps = 7/175 (4%)
Frame = +2
Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208
T F +++ ++ L AGY G ++ Y+G TG+ +R VF GP +YQ+L+HMV DK+H
Sbjct: 1080 TPFTEVTVDEISDLLEQAGYQKRGFEIMYNGHTGKKMRVQVFLGPTYYQRLRHMVDDKIH 1139
Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388
ARARGP +LTRQP EGR+RDGGLR GEMERDC+I +GA+ L ERL SD +TV+ C
Sbjct: 1140 ARARGPLQILTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFTVSDAYTVHVCD 1199
Query: 389 TCGLLG-----YKGW--CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
CGL+ KG C+ C +S + IPYA KLLFQEL MN+ R+ D
Sbjct: 1200 ICGLMSPIASIKKGMYECRPCHNKTRISQIHIPYAAKLLFQELLAMNIATRMFTD 1254
[220][TOP]
>UniRef100_Q1HDK2 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria avenaria f. sp.
triticae RepID=Q1HDK2_9PLEO
Length = 1262
Score = 176 bits (446), Expect = 1e-42
Identities = 87/175 (49%), Positives = 114/175 (65%), Gaps = 7/175 (4%)
Frame = +2
Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208
T F +++ ++ L AGY G ++ Y+G TG+ +R VF GP +YQ+L+HMV DK+H
Sbjct: 1080 TPFTEVTVDEISDLLEQAGYQKRGFEIMYNGHTGKKMRVQVFLGPTYYQRLRHMVDDKIH 1139
Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388
ARARGP +LTRQP EGR+RDGGLR GEMERDC+I +GA+ L ERL SD +TV+ C
Sbjct: 1140 ARARGPLQILTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFTVSDAYTVHVCD 1199
Query: 389 TCGLLG-----YKGW--CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
CGL+ KG C+ C +S + IPYA KLLFQEL MN+ R+ D
Sbjct: 1200 ICGLMSPIASIKKGMYECRPCHNKTRISQIHIPYAAKLLFQELLAMNIATRMFTD 1254
[221][TOP]
>UniRef100_Q1HDK1 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria avenaria f. sp.
triticae RepID=Q1HDK1_9PLEO
Length = 1262
Score = 176 bits (446), Expect = 1e-42
Identities = 87/175 (49%), Positives = 114/175 (65%), Gaps = 7/175 (4%)
Frame = +2
Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208
T F +++ ++ L AGY G ++ Y+G TG+ +R VF GP +YQ+L+HMV DK+H
Sbjct: 1080 TPFTEVTVDEISDLLEQAGYQKRGFEIMYNGHTGKKMRVQVFLGPTYYQRLRHMVDDKIH 1139
Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388
ARARGP +LTRQP EGR+RDGGLR GEMERDC+I +GA+ L ERL SD +TV+ C
Sbjct: 1140 ARARGPLQILTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFTVSDAYTVHVCD 1199
Query: 389 TCGLLG-----YKGW--CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
CGL+ KG C+ C +S + IPYA KLLFQEL MN+ R+ D
Sbjct: 1200 ICGLMSPIASIKKGMYECRPCHNKTRISQIHIPYAAKLLFQELLAMNIATRMFTD 1254
[222][TOP]
>UniRef100_Q1HDJ9 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria avenaria f. sp.
triticae RepID=Q1HDJ9_9PLEO
Length = 1262
Score = 176 bits (446), Expect = 1e-42
Identities = 87/175 (49%), Positives = 114/175 (65%), Gaps = 7/175 (4%)
Frame = +2
Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208
T F +++ ++ L AGY G ++ Y+G TG+ +R VF GP +YQ+L+HMV DK+H
Sbjct: 1080 TPFTEVTVDEISDLLEQAGYQKRGFEIMYNGHTGKKMRVQVFLGPTYYQRLRHMVDDKIH 1139
Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388
ARARGP +LTRQP EGR+RDGGLR GEMERDC+I +GA+ L ERL SD +TV+ C
Sbjct: 1140 ARARGPLQILTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFTVSDAYTVHVCD 1199
Query: 389 TCGLLG-----YKGW--CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
CGL+ KG C+ C +S + IPYA KLLFQEL MN+ R+ D
Sbjct: 1200 ICGLMSPIASIKKGMYECRPCHNKTRISQIHIPYAAKLLFQELLAMNIATRMFTD 1254
[223][TOP]
>UniRef100_Q1HDJ8 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum
RepID=Q1HDJ8_PHANO
Length = 1262
Score = 176 bits (446), Expect = 1e-42
Identities = 87/175 (49%), Positives = 114/175 (65%), Gaps = 7/175 (4%)
Frame = +2
Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208
T F +++ ++ L AGY G ++ Y+G TG+ +R VF GP +YQ+L+HMV DK+H
Sbjct: 1080 TPFTEVTVDEISDLLEQAGYQKRGFEIMYNGHTGKKMRVQVFLGPTYYQRLRHMVDDKIH 1139
Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388
ARARGP +LTRQP EGR+RDGGLR GEMERDC+I +GA+ L ERL SD +TV+ C
Sbjct: 1140 ARARGPLQILTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFTVSDAYTVHVCD 1199
Query: 389 TCGLLG-----YKGW--CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
CGL+ KG C+ C +S + IPYA KLLFQEL MN+ R+ D
Sbjct: 1200 ICGLMSPIASIKKGMYECRPCHNKTRISQIHIPYAAKLLFQELLAMNIATRMFTD 1254
[224][TOP]
>UniRef100_Q1HDI7 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria avenaria f. sp.
avenaria RepID=Q1HDI7_9PLEO
Length = 1262
Score = 176 bits (446), Expect = 1e-42
Identities = 87/175 (49%), Positives = 114/175 (65%), Gaps = 7/175 (4%)
Frame = +2
Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208
T F +++ ++ L AGY G ++ Y+G TG+ +R VF GP +YQ+L+HMV DK+H
Sbjct: 1080 TPFTEVTVDEISDLLEQAGYQKRGFEIMYNGHTGKKMRVQVFLGPTYYQRLRHMVDDKIH 1139
Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388
ARARGP +LTRQP EGR+RDGGLR GEMERDC+I +GA+ L ERL SD +TV+ C
Sbjct: 1140 ARARGPLQILTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFTVSDAYTVHVCD 1199
Query: 389 TCGLLG-----YKGW--CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
CGL+ KG C+ C +S + IPYA KLLFQEL MN+ R+ D
Sbjct: 1200 ICGLMSPIASIKKGMYECRPCHNKTRISQIHIPYAAKLLFQELLAMNIATRMFTD 1254
[225][TOP]
>UniRef100_Q1HDI5 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria avenaria f. sp.
avenaria RepID=Q1HDI5_9PLEO
Length = 1262
Score = 176 bits (446), Expect = 1e-42
Identities = 87/175 (49%), Positives = 114/175 (65%), Gaps = 7/175 (4%)
Frame = +2
Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208
T F +++ ++ L AGY G ++ Y+G TG+ +R VF GP +YQ+L+HMV DK+H
Sbjct: 1080 TPFTEVTVDEISDLLEQAGYQKRGFEIMYNGHTGKKMRVQVFLGPTYYQRLRHMVDDKIH 1139
Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388
ARARGP +LTRQP EGR+RDGGLR GEMERDC+I +GA+ L ERL SD +TV+ C
Sbjct: 1140 ARARGPLQILTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFTVSDAYTVHVCD 1199
Query: 389 TCGLLG-----YKGW--CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
CGL+ KG C+ C +S + IPYA KLLFQEL MN+ R+ D
Sbjct: 1200 ICGLMSPIASIKKGMYECRPCHNKTRISQIHIPYAAKLLFQELLAMNIATRMFTD 1254
[226][TOP]
>UniRef100_Q0U9V8 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum
RepID=Q0U9V8_PHANO
Length = 1252
Score = 176 bits (446), Expect = 1e-42
Identities = 87/175 (49%), Positives = 114/175 (65%), Gaps = 7/175 (4%)
Frame = +2
Query: 29 TAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMH 208
T F +++ ++ L AGY G ++ Y+G TG+ +R VF GP +YQ+L+HMV DK+H
Sbjct: 1070 TPFTEVTVDEISDLLEQAGYQKRGFEIMYNGHTGKKMRVQVFLGPTYYQRLRHMVDDKIH 1129
Query: 209 ARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACG 388
ARARGP +LTRQP EGR+RDGGLR GEMERDC+I +GA+ L ERL SD +TV+ C
Sbjct: 1130 ARARGPLQILTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFTVSDAYTVHVCD 1189
Query: 389 TCGLLG-----YKGW--CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
CGL+ KG C+ C +S + IPYA KLLFQEL MN+ R+ D
Sbjct: 1190 ICGLMSPIASIKKGMYECRPCHNKTRISQIHIPYAAKLLFQELLAMNIATRMFTD 1244
[227][TOP]
>UniRef100_C5DW43 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DW43_ZYGRC
Length = 1224
Score = 176 bits (446), Expect = 1e-42
Identities = 86/168 (51%), Positives = 111/168 (66%), Gaps = 7/168 (4%)
Frame = +2
Query: 50 IEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPR 229
+E ++ L GY G ++ Y+G TG+ L + +F GP +YQ+L+HMV DK+HARARGP
Sbjct: 1052 VEGISKLLREHGYQSRGFEVMYNGHTGKKLMSQIFFGPTYYQRLRHMVDDKIHARARGPM 1111
Query: 230 ALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGY 409
+LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG CGL+
Sbjct: 1112 QVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAAFLKERLMEASDAFRVHICGICGLMSV 1171
Query: 410 -------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
+ C+ C + + IPYA KLLFQEL MN+ PRL D
Sbjct: 1172 VAKLNHNQFECRGCDNKIDIYQIHIPYAAKLLFQELMAMNITPRLYTD 1219
[228][TOP]
>UniRef100_C5DLS0 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5DLS0_LACTC
Length = 1220
Score = 176 bits (446), Expect = 1e-42
Identities = 86/168 (51%), Positives = 111/168 (66%), Gaps = 7/168 (4%)
Frame = +2
Query: 50 IEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPR 229
++ + L GY G ++ Y+G TG+ L A +F GP +YQ+L+HMV DK+HARARGP
Sbjct: 1048 VDGISRLLREHGYQSRGFEVMYNGHTGKKLMAQIFFGPTYYQRLRHMVDDKIHARARGPV 1107
Query: 230 ALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGY 409
+LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG CGL+
Sbjct: 1108 QVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAAFLKERLMEASDAFRVHICGVCGLMTV 1167
Query: 410 -------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
+ C+ C+ + + IPYA KLLFQEL MN+ PRL D
Sbjct: 1168 VAKLKHNQFECRGCKNKIDIYQIHIPYAAKLLFQELMAMNIAPRLYTD 1215
[229][TOP]
>UniRef100_C8SAT6 RNA polymerase Rpb2 domain 6 n=1 Tax=Ferroglobus placidus DSM 10642
RepID=C8SAT6_FERPL
Length = 604
Score = 176 bits (446), Expect = 1e-42
Identities = 90/176 (51%), Positives = 118/176 (67%), Gaps = 6/176 (3%)
Frame = +2
Query: 26 GTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKM 205
GT F G++ ED EAL G+SY+GK++ Y G TG+ A +F G I+Y+KL HMV K+
Sbjct: 427 GTIFHGEKEEDLREALKKYGFSYTGKEVMYDGITGKRFVAEIFVGVIYYEKLYHMVSSKI 486
Query: 206 HARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYAC 385
HAR+RGP +LTRQPTEGRSR GGLR GEMERD LIG+GA++LL +RL+ SD V+ C
Sbjct: 487 HARSRGPVQILTRQPTEGRSRKGGLRFGEMERDVLIGHGAALLLKDRLLEESDKVEVWVC 546
Query: 386 GTCGLLG---YK---GWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLDD 535
G CG + YK +C+ C + V +++ YA KLL EL+ M + PRL L D
Sbjct: 547 GNCGHVATYDYKRNTAYCKVCDDESNVHKIEMSYAFKLLLDELKSMLIAPRLILGD 602
[230][TOP]
>UniRef100_Q8ZYQ9 DNA-directed RNA polymerase n=1 Tax=Pyrobaculum aerophilum
RepID=Q8ZYQ9_PYRAE
Length = 1127
Score = 176 bits (445), Expect = 1e-42
Identities = 92/181 (50%), Positives = 118/181 (65%), Gaps = 6/181 (3%)
Frame = +2
Query: 11 GKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHM 190
G+ T F+G + ED + L+ GY + GK++ YSG TGE L A +F G ++YQKL HM
Sbjct: 944 GQLIDATPFEGVKEEDLRKLLLKLGYKWDGKEVMYSGITGERLVADIFIGIVYYQKLHHM 1003
Query: 191 VKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVF 370
V DK+HARARGP +LTRQPTEGRSR+GGLRLGEMERD LI +GAS LL ERL+ SSD +
Sbjct: 1004 VADKIHARARGPVQILTRQPTEGRSREGGLRLGEMERDVLIAHGASALLHERLVESSDKY 1063
Query: 371 TVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKLD 532
+Y C CGL Y K C + + +PYA KLL QEL + + P+L+L
Sbjct: 1064 VMYVCELCGLPAYLDAKSNKPKCPIHGDTGQFAKVVVPYAFKLLLQELIALGIYPKLELS 1123
Query: 533 D 535
+
Sbjct: 1124 E 1124
[231][TOP]
>UniRef100_Q1L5Y8 DNA-directed RNA polymerase n=1 Tax=Antirrhinum majus
RepID=Q1L5Y8_ANTMA
Length = 1200
Score = 175 bits (444), Expect = 2e-42
Identities = 85/183 (46%), Positives = 112/183 (61%), Gaps = 6/183 (3%)
Frame = +2
Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184
H GK T F +++ ++AL GY G + Y+G TG L + +F GP +YQ+LK
Sbjct: 1006 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSSMIFLGPTYYQRLK 1065
Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364
HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD
Sbjct: 1066 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1125
Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526
+ ++ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+
Sbjct: 1126 AYRIHVCEQCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRML 1185
Query: 527 LDD 535
D
Sbjct: 1186 TKD 1188
[232][TOP]
>UniRef100_Q1L5B5 DNA-directed RNA polymerase n=1 Tax=Rhododendron macrophyllum
RepID=Q1L5B5_RHOMC
Length = 1191
Score = 175 bits (444), Expect = 2e-42
Identities = 85/183 (46%), Positives = 112/183 (61%), Gaps = 6/183 (3%)
Frame = +2
Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184
H GK T F +++ ++AL GY G + Y+G TG L + +F GP +YQ+LK
Sbjct: 997 HMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTSMIFLGPTYYQRLK 1056
Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364
HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD
Sbjct: 1057 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1116
Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526
+ ++ C CGL+ C+ C+ + + IPYACKLLFQEL M + PR+
Sbjct: 1117 AYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRML 1176
Query: 527 LDD 535
D
Sbjct: 1177 TKD 1179
[233][TOP]
>UniRef100_A7SHD8 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
RepID=A7SHD8_NEMVE
Length = 1182
Score = 175 bits (444), Expect = 2e-42
Identities = 87/187 (46%), Positives = 118/187 (63%), Gaps = 7/187 (3%)
Frame = +2
Query: 5 HEGKFRMGTAF-DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
++G+ T F D ++ ++ L GY G ++ YSG TG L VF GP +YQ+L
Sbjct: 996 NKGEIGDATPFNDAVNVQKISQLLNDYGYHLRGNEVLYSGFTGRKLNTQVFLGPTYYQRL 1055
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DK+H+RARGP +LTRQP EGRSRDGGLR GEMERDC+I +G++ L ERL S
Sbjct: 1056 KHMVDDKIHSRARGPLQILTRQPMEGRSRDGGLRFGEMERDCMIAHGSAQFLNERLFEVS 1115
Query: 362 DVFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
D ++ + C CGL+ C+ C+ VS +++PYA KLLFQEL M++ PR+
Sbjct: 1116 DPYSCHVCNLCGLIAIANLRNNTFECRGCKNKTQVSRIRMPYAAKLLFQELMSMSIAPRM 1175
Query: 524 KLDDP*K 544
+ DP K
Sbjct: 1176 MVCDPVK 1182
[234][TOP]
>UniRef100_Q5A8Y5 DNA-directed RNA polymerase n=2 Tax=Candida albicans
RepID=Q5A8Y5_CANAL
Length = 1234
Score = 175 bits (444), Expect = 2e-42
Identities = 90/179 (50%), Positives = 114/179 (63%), Gaps = 14/179 (7%)
Frame = +2
Query: 29 TAFDGDR-------IEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
+ F+GD E + L GY G ++ Y+G TG+ L A VF GP +YQ+L+H
Sbjct: 1045 SGFEGDASPFTDVTTEQISTLLRDHGYQSRGFEVMYNGHTGKKLMAQVFFGPTYYQRLRH 1104
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV DK+HARARGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD
Sbjct: 1105 MVDDKIHARARGPVQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAGFLKERLMEASDA 1164
Query: 368 FTVYACGTCGLLGY-------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
F V+ CG CGL+ + C+ C+ + + IPYA KLLFQEL MN+ PRL
Sbjct: 1165 FRVHVCGMCGLMSVIANLKKNQFECRSCKNKTNIYQIHIPYAAKLLFQELMAMNISPRL 1223
[235][TOP]
>UniRef100_C4Y645 DNA-directed RNA polymerase n=1 Tax=Clavispora lusitaniae ATCC 42720
RepID=C4Y645_CLAL4
Length = 858
Score = 175 bits (444), Expect = 2e-42
Identities = 87/164 (53%), Positives = 110/164 (67%), Gaps = 7/164 (4%)
Frame = +2
Query: 53 EDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPRA 232
E ++ L GY G ++ Y+G TG+ L A VF GP +YQ+L+HMV DK+HARARGP
Sbjct: 684 EAVSKLLREHGYQSRGFEVMYNGHTGKKLMAQVFFGPTYYQRLRHMVDDKIHARARGPVQ 743
Query: 233 LLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGY- 409
+LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG CGL+
Sbjct: 744 VLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAGFLKERLMEASDAFRVHVCGICGLMSVI 803
Query: 410 ------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
+ C+ C+ + + IPYA KLLFQEL MN+ PRL
Sbjct: 804 ANLKKNQFECRSCKNKTNIYQIHIPYAAKLLFQELMAMNISPRL 847
[236][TOP]
>UniRef100_B9W6V2 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
RepID=B9W6V2_CANDC
Length = 1234
Score = 175 bits (444), Expect = 2e-42
Identities = 90/179 (50%), Positives = 114/179 (63%), Gaps = 14/179 (7%)
Frame = +2
Query: 29 TAFDGDR-------IEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
+ F+GD E + L GY G ++ Y+G TG+ L A VF GP +YQ+L+H
Sbjct: 1045 SGFEGDASPFTDVTTEQISTLLRDHGYQSRGFEVMYNGHTGKKLMAQVFFGPTYYQRLRH 1104
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV DK+HARARGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD
Sbjct: 1105 MVDDKIHARARGPVQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAGFLKERLMEASDA 1164
Query: 368 FTVYACGTCGLLGY-------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
F V+ CG CGL+ + C+ C+ + + IPYA KLLFQEL MN+ PRL
Sbjct: 1165 FRVHVCGMCGLMSVIANLKKNQFECRSCKNKTNIYQIHIPYAAKLLFQELMAMNISPRL 1223
[237][TOP]
>UniRef100_B5RV50 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
RepID=B5RV50_DEBHA
Length = 1232
Score = 175 bits (444), Expect = 2e-42
Identities = 87/164 (53%), Positives = 110/164 (67%), Gaps = 7/164 (4%)
Frame = +2
Query: 53 EDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPRA 232
E ++ L GY G ++ Y+G TG+ L A VF GP +YQ+L+HMV DK+HARARGP
Sbjct: 1058 EAVSKLLREHGYQSRGFEVMYNGHTGKKLMAQVFFGPTYYQRLRHMVDDKIHARARGPVQ 1117
Query: 233 LLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGY- 409
+LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG CGL+
Sbjct: 1118 VLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAGFLKERLMEASDAFRVHVCGICGLMSVI 1177
Query: 410 ------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
+ C+ C+ + + IPYA KLLFQEL MN+ PRL
Sbjct: 1178 ANLKKNQFECRSCKNKTNIYQIHIPYAAKLLFQELMAMNISPRL 1221
[238][TOP]
>UniRef100_Q464Y6 DNA-directed RNA polymerase n=1 Tax=Methanosarcina barkeri str.
Fusaro RepID=Q464Y6_METBF
Length = 604
Score = 175 bits (444), Expect = 2e-42
Identities = 88/182 (48%), Positives = 118/182 (64%), Gaps = 6/182 (3%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
EG+ TAF G+ ED EAL G++++GK++FY G+TG+ + A VF G I YQKL H
Sbjct: 421 EGRRVNATAFSGENEEDLREALKRHGFAHTGKEVFYDGATGKMIPADVFVGVILYQKLHH 480
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV KMHAR+RGP +LTRQPTEGR+R+GGLR GEMERD L+G+GA+M L ERL+ SD
Sbjct: 481 MVTSKMHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVLVGHGAAMSLKERLLDESDK 540
Query: 368 FTVYACGTCGLLG------YKGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
C CG++ +C C + +++ YA KLL E++ + V PRLKL
Sbjct: 541 VVELVCSHCGMIATYDKQRNVAFCSTCGADTDIYPVEMSYAFKLLLDEIKSLGVAPRLKL 600
Query: 530 DD 535
+D
Sbjct: 601 ED 602
[239][TOP]
>UniRef100_UPI000151B416 hypothetical protein PGUG_02833 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151B416
Length = 1291
Score = 175 bits (443), Expect = 2e-42
Identities = 87/164 (53%), Positives = 109/164 (66%), Gaps = 7/164 (4%)
Frame = +2
Query: 53 EDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPRA 232
E ++ L GY G ++ Y G TG+ L A VF GP +YQ+L+HMV DK+HARARGP
Sbjct: 1117 EAVSKLLREHGYQSRGFEVMYHGHTGKKLMAQVFFGPTYYQRLRHMVDDKIHARARGPVQ 1176
Query: 233 LLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGY- 409
+LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG CGL+
Sbjct: 1177 VLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAGFLKERLMEASDAFRVHVCGVCGLMSVI 1236
Query: 410 ------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
+ C+ C+ + + IPYA KLLFQEL MN+ PRL
Sbjct: 1237 ANLKKNQFECRSCKNKTNIYQIHIPYAAKLLFQELMAMNISPRL 1280
[240][TOP]
>UniRef100_A3DMP3 DNA-directed RNA polymerase n=1 Tax=Staphylothermus marinus F1
RepID=A3DMP3_STAMF
Length = 1156
Score = 175 bits (443), Expect = 2e-42
Identities = 88/182 (48%), Positives = 118/182 (64%), Gaps = 6/182 (3%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
EG+F T F + I++ L GY SG + Y G TGE L+ +F G ++YQKL H
Sbjct: 970 EGRFVDATPFHKEPIDNLMITLKRHGYPMSGYETMYDGRTGEILKTPIFIGIVYYQKLHH 1029
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV DK+HARARGP +LTRQPTEGR+++GGLR GEME DCL+G+GAS+LL E+++ SD
Sbjct: 1030 MVADKIHARARGPVQILTRQPTEGRAKEGGLRFGEMEVDCLVGHGASLLLKEQMLDKSDK 1089
Query: 368 FTVYACGTCGLLGY------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
T+Y C CG +GY K C + + +++ YA KLL QEL M ++PRLKL
Sbjct: 1090 TTIYVCELCGHIGYYDRIRGKYMCPIHKDKGKLKPVEVSYAFKLLVQELMSMCIMPRLKL 1149
Query: 530 DD 535
+D
Sbjct: 1150 ED 1151
[241][TOP]
>UniRef100_A2BN33 DNA-directed RNA polymerase n=1 Tax=Hyperthermus butylicus DSM 5456
RepID=A2BN33_HYPBU
Length = 1138
Score = 175 bits (443), Expect = 2e-42
Identities = 88/178 (49%), Positives = 120/178 (67%), Gaps = 6/178 (3%)
Frame = +2
Query: 14 KFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMV 193
+F GT F + IE+ L+ GY+ G ++ Y G TGE +R + G ++YQKL HMV
Sbjct: 953 RFVDGTPFAKESIENLRIELLKTGYAPDGTEIMYDGRTGEMIRTPILIGLVYYQKLHHMV 1012
Query: 194 KDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFT 373
DK+HARARGP +LTRQPTEGR+R+GGLR GEMERDCL+G+GA+MLL ER++ SSD +
Sbjct: 1013 ADKIHARARGPVQVLTRQPTEGRAREGGLRFGEMERDCLVGHGAAMLLRERMLESSDRYV 1072
Query: 374 VYACGTCGLLGY-----KGW-CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
+Y C CG + + +G+ C ++A+ +PYA KLL QEL M ++PRLKL
Sbjct: 1073 LYVCELCGHIAWFDRNKRGYICPVHGDKGKIAAVIVPYAFKLLLQELMSMCIMPRLKL 1130
[242][TOP]
>UniRef100_C7NTX9 RNA polymerase Rpb2 domain 6 n=2 Tax=Halorhabdus utahensis
RepID=C7NTX9_HALUD
Length = 608
Score = 175 bits (443), Expect = 2e-42
Identities = 86/182 (47%), Positives = 121/182 (66%), Gaps = 6/182 (3%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
EG+ GTAF G+ ED ++L G+ SGK++ YSG TGE + A +F G IFYQKL H
Sbjct: 425 EGRRVDGTAFTGEDEEDLRDSLEDHGFDSSGKEVMYSGITGEKVEAEIFVGNIFYQKLYH 484
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV +K+HAR+RGP +LTRQPTEGR+R+GGLR+GEMERD IG+GA++ L ERL+ SD
Sbjct: 485 MVSNKIHARSRGPVQVLTRQPTEGRAREGGLRIGEMERDVFIGHGAALTLKERLLDESDQ 544
Query: 368 FTVYACGTCGLLGYKG------WCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
++ CG CG+ + +C C V +++ YA KLL E++ + + PR++L
Sbjct: 545 EWIHVCGQCGMTAVENVDQRRVYCPNCDEETDVHEVEMSYAFKLLLDEMKALGIAPRIEL 604
Query: 530 DD 535
+D
Sbjct: 605 ED 606
[243][TOP]
>UniRef100_C5NSC6 DNA-directed RNA polymerase n=1 Tax=Halococcus hamelinensis
RepID=C5NSC6_9EURY
Length = 613
Score = 175 bits (443), Expect = 2e-42
Identities = 89/182 (48%), Positives = 118/182 (64%), Gaps = 6/182 (3%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
EG+ GTAF G+ E+ AL G+ SGK+ YSG TGE + A +F G IFYQKL H
Sbjct: 430 EGRRVDGTAFTGEEEEELRGALEDHGFDSSGKERMYSGVTGEKIDAEIFVGTIFYQKLYH 489
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV +K+HAR+RGP +LTRQPTEGR+R+GGLR+GEMERD LIG+GA+M L ERL+ SD
Sbjct: 490 MVSNKIHARSRGPVQVLTRQPTEGRAREGGLRVGEMERDVLIGHGAAMALKERLLDESDR 549
Query: 368 FTVYACGTCGLLGYKG------WCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
+Y CG CG+ + +C C + +++ YA KLL E++ + + PRL L
Sbjct: 550 EFIYVCGNCGMSAVENVEQRRVYCPNCGEETDIHEIEMSYAFKLLLDEMKALGIAPRLDL 609
Query: 530 DD 535
D
Sbjct: 610 ID 611
[244][TOP]
>UniRef100_A5DHT2 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Pichia
guilliermondii RepID=RPB2_PICGU
Length = 1236
Score = 175 bits (443), Expect = 2e-42
Identities = 87/164 (53%), Positives = 109/164 (66%), Gaps = 7/164 (4%)
Frame = +2
Query: 53 EDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPRA 232
E ++ L GY G ++ Y G TG+ L A VF GP +YQ+L+HMV DK+HARARGP
Sbjct: 1062 EAVSKLLREHGYQSRGFEVMYHGHTGKKLMAQVFFGPTYYQRLRHMVDDKIHARARGPVQ 1121
Query: 233 LLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDVFTVYACGTCGLLGY- 409
+LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERLM +SD F V+ CG CGL+
Sbjct: 1122 VLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAGFLKERLMEASDAFRVHVCGVCGLMSVI 1181
Query: 410 ------KGWCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
+ C+ C+ + + IPYA KLLFQEL MN+ PRL
Sbjct: 1182 ANLKKNQFECRSCKNKTNIYQIHIPYAAKLLFQELMAMNISPRL 1225
[245][TOP]
>UniRef100_Q54J75 DNA-directed RNA polymerase II subunit rpb2 n=1 Tax=Dictyostelium
discoideum RepID=RPB2_DICDI
Length = 1170
Score = 175 bits (443), Expect = 2e-42
Identities = 85/184 (46%), Positives = 116/184 (63%), Gaps = 13/184 (7%)
Frame = +2
Query: 11 GKFRMGTAFDGDR-------IEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIF 169
GK T +GD +E ++AL GY +G ++ Y+G TG + A +F GP +
Sbjct: 983 GKVSASTGDEGDATPFTDVTVEAISQALHKIGYQMTGHEVMYNGHTGRRMDAQIFIGPTY 1042
Query: 170 YQKLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERL 349
YQ+LKHMV DK+H+R+RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL
Sbjct: 1043 YQRLKHMVDDKIHSRSRGPVQILTRQPVEGRSRDGGLRFGEMERDCMISHGAAQFLKERL 1102
Query: 350 MHSSDVFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNV 511
SD + V+ C CGL+ C+ C+ +S +++PYA KLLFQEL M++
Sbjct: 1103 FDQSDSYRVHICDICGLIAIANLKKNSFECRRCKNKTQISQIRMPYAAKLLFQELMSMSI 1162
Query: 512 VPRL 523
PR+
Sbjct: 1163 APRM 1166
[246][TOP]
>UniRef100_UPI0000221AC5 hypothetical protein CBG18197 n=1 Tax=Caenorhabditis briggsae AF16
RepID=UPI0000221AC5
Length = 1194
Score = 174 bits (442), Expect = 3e-42
Identities = 87/180 (48%), Positives = 114/180 (63%), Gaps = 7/180 (3%)
Frame = +2
Query: 5 HEGKFRMGTAF-DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
++G+ T F D ++ + L GY G ++ Y+G TG+ L +F GP +YQ+L
Sbjct: 998 NKGEIGDATPFNDTVNVQKISGLLCEYGYHLRGNEVMYNGHTGKKLTTQIFFGPTYYQRL 1057
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DK+H+RARGP ++ RQP EGR+RDGGLR GEMERDC I +GA+ L ERL S
Sbjct: 1058 KHMVDDKIHSRARGPIQMMNRQPMEGRARDGGLRFGEMERDCQISHGATQFLRERLFEVS 1117
Query: 362 DVFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
D + VY C CGL+ C+ CR VSA++IPYACKLLFQEL M++ PRL
Sbjct: 1118 DPYHVYVCNNCGLIVVANLRTNSFECKACRNKTQVSAVRIPYACKLLFQELMSMSIAPRL 1177
[247][TOP]
>UniRef100_Q1L5Z4 DNA-directed RNA polymerase n=1 Tax=Nicotiana sylvestris
RepID=Q1L5Z4_NICSY
Length = 1203
Score = 174 bits (442), Expect = 3e-42
Identities = 87/184 (47%), Positives = 111/184 (60%), Gaps = 6/184 (3%)
Frame = +2
Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184
H GK T F +++ ++AL GY G + Y+G TG L A +F GP +YQ+LK
Sbjct: 1011 HMGKEGDATPFTDVTVDNISKALHRCGYQMRGFERMYNGHTGRVLTAMIFLGPTYYQRLK 1070
Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364
HMV DK+H+R RGP +LTRQP EGRSRDGGLR GEMERDC+I +GA+ L ERL SD
Sbjct: 1071 HMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSD 1130
Query: 365 VFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLK 526
+ V+ C CGL+ C+ CR + IPYACKLL QEL M + PR+
Sbjct: 1131 AYRVHVCQQCGLIAIANLKKMSFECRSCRNKTDNVQVYIPYACKLLIQELMSMAIAPRML 1190
Query: 527 LDDP 538
+P
Sbjct: 1191 TKEP 1194
[248][TOP]
>UniRef100_Q1ANF0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coleochaete scutata
RepID=Q1ANF0_COLSC
Length = 702
Score = 174 bits (442), Expect = 3e-42
Identities = 85/179 (47%), Positives = 115/179 (64%), Gaps = 6/179 (3%)
Frame = +2
Query: 5 HEGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLK 184
H G+ T F +++ ++AL GY G + Y+G TG L+A +F GP +YQ+LK
Sbjct: 485 HIGREGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRKLQAQIFLGPTYYQRLK 544
Query: 185 HMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSD 364
HMV DK+H+RARGP +LTRQP EGR++DGGLR GEMERDC+I +GA+ + ERL SD
Sbjct: 545 HMVDDKIHSRARGPVQILTRQPAEGRAKDGGLRFGEMERDCMIAHGAAHFMKERLFDQSD 604
Query: 365 VFTVYACGTCGLLGY----KGW--CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
+ V+ C CGL+ KG C+ C+ + + IPYACKLLFQEL M + PR+
Sbjct: 605 AYRVHVCEICGLIAIANLKKGTFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM 663
[249][TOP]
>UniRef100_A8XS50 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae
RepID=A8XS50_CAEBR
Length = 1215
Score = 174 bits (442), Expect = 3e-42
Identities = 87/180 (48%), Positives = 114/180 (63%), Gaps = 7/180 (3%)
Frame = +2
Query: 5 HEGKFRMGTAF-DGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKL 181
++G+ T F D ++ + L GY G ++ Y+G TG+ L +F GP +YQ+L
Sbjct: 1019 NKGEIGDATPFNDTVNVQKISGLLCEYGYHLRGNEVMYNGHTGKKLTTQIFFGPTYYQRL 1078
Query: 182 KHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSS 361
KHMV DK+H+RARGP ++ RQP EGR+RDGGLR GEMERDC I +GA+ L ERL S
Sbjct: 1079 KHMVDDKIHSRARGPIQMMNRQPMEGRARDGGLRFGEMERDCQISHGATQFLRERLFEVS 1138
Query: 362 DVFTVYACGTCGLLGYKGW------CQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRL 523
D + VY C CGL+ C+ CR VSA++IPYACKLLFQEL M++ PRL
Sbjct: 1139 DPYHVYVCNNCGLIVVANLRTNSFECKACRNKTQVSAVRIPYACKLLFQELMSMSIAPRL 1198
[250][TOP]
>UniRef100_C5NSD1 DNA-directed RNA polymerase n=1 Tax=Halococcus thailandensis
RepID=C5NSD1_9EURY
Length = 611
Score = 174 bits (442), Expect = 3e-42
Identities = 87/182 (47%), Positives = 121/182 (66%), Gaps = 6/182 (3%)
Frame = +2
Query: 8 EGKFRMGTAFDGDRIEDCAEALVAAGYSYSGKDMFYSGSTGEPLRAYVFAGPIFYQKLKH 187
EG+ GTAF G+ E+ ++L G+ SGK++ +SG TGE + A +F G IFYQKL H
Sbjct: 428 EGRRVDGTAFTGEEEEELRDSLEEHGFDSSGKEIMHSGVTGEKIDAEIFVGTIFYQKLYH 487
Query: 188 MVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDV 367
MV +K+HAR+RGP +LTRQPTEGR+R+GGLR+GEMERD LIG+GA+M L ERL+ SD
Sbjct: 488 MVSNKIHARSRGPVQVLTRQPTEGRAREGGLRVGEMERDVLIGHGAAMALKERLLDESDR 547
Query: 368 FTVYACGTCGLLGYKG------WCQYCRTGAAVSALQIPYACKLLFQELQGMNVVPRLKL 529
+Y CG CG+ + +C C + +++ YA KLL E++ + + PRL+L
Sbjct: 548 EFIYVCGECGMSAVENVEQRRVYCPNCGEETDIHEIEMSYAFKLLLDEMKALGIAPRLEL 607
Query: 530 DD 535
D
Sbjct: 608 LD 609