[UP]
[1][TOP]
>UniRef100_Q9XG28 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q9XG28_GALSU
Length = 302
Score = 131 bits (329), Expect = 3e-29
Identities = 71/137 (51%), Positives = 90/137 (65%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFAE 182
EAELKHCRI MLA LGF VQE +T P YF + V V AHD +V TGGM Q+LL+ F E
Sbjct: 166 EAELKHCRIAMLAALGFMVQELWTFPHPYF-SKVPPVLAHDVYVKTGGMSQILLFVIFFE 224
Query: 183 FFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLIHQE 362
S+ AV+ M+G REPG F FDPL + P + E SE++NGRLAMI +GG IHQ
Sbjct: 225 IISVFAVSQMMEG-KREPGVFHFDPLGLGKDPDTFRKYEWSELRNGRLAMIAVGGFIHQY 283
Query: 363 FYSHKPIMDLLAHPAPI 413
+ + + I + LA+ P+
Sbjct: 284 WVTKQGIFEQLANFKPL 300
[2][TOP]
>UniRef100_Q9M441 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q9M441_GALSU
Length = 302
Score = 131 bits (329), Expect = 3e-29
Identities = 71/137 (51%), Positives = 90/137 (65%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFAE 182
EAELKHCRI MLA LGF VQE +T P YF + V V AHD +V TGGM Q+LL+ F E
Sbjct: 166 EAELKHCRIAMLAALGFMVQELWTFPHPYF-SKVPPVLAHDVYVKTGGMSQILLFVIFFE 224
Query: 183 FFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLIHQE 362
S+ AV+ M+G REPG F FDPL + P + E SE++NGRLAMI +GG IHQ
Sbjct: 225 IISVFAVSQMMEG-KREPGVFHFDPLGLGKDPDTFRKYEWSELRNGRLAMIAVGGFIHQY 283
Query: 363 FYSHKPIMDLLAHPAPI 413
+ + + I + LA+ P+
Sbjct: 284 WVTKQGIFEQLANFKPL 300
[3][TOP]
>UniRef100_A8KCQ6 Light harvesting complex protein 7 (Fragment) n=1 Tax=Guillardia
theta RepID=A8KCQ6_GUITH
Length = 198
Score = 128 bits (321), Expect = 3e-28
Identities = 67/133 (50%), Positives = 88/133 (66%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFAE 182
EAELKH R MLA LGF VQE +T P +FP + VDAHDYFV GG Q++ W F E
Sbjct: 65 EAELKHGRFAMLAVLGFIVQELYTFP--FFPK-MAPVDAHDYFVQQGGGSQIIFWISFVE 121
Query: 183 FFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLIHQE 362
F ++A+ T+QG REPGDF+FDPL +A A + L+EIK+ RLAMI IGG IHQ
Sbjct: 122 IFGVVALFETLQG-KREPGDFAFDPLGLAKDEATLERYRLAEIKHSRLAMIAIGGFIHQY 180
Query: 363 FYSHKPIMDLLAH 401
+ + + +++ L +
Sbjct: 181 WVTKQTVLEQLGN 193
[4][TOP]
>UniRef100_Q5K286 Light harvesting protein 2 (Fragment) n=1 Tax=Guillardia theta
RepID=Q5K286_GUITH
Length = 244
Score = 120 bits (300), Expect = 8e-26
Identities = 66/138 (47%), Positives = 89/138 (64%), Gaps = 2/138 (1%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFAE 182
EAELKH RI MLA LG+ VQE++T P F + V ++AHD V +GGM Q+LLW F E
Sbjct: 79 EAELKHGRIAMLAVLGWLVQESYTFP---FFDKVSPIEAHDLLVKSGGMSQILLWTSFLE 135
Query: 183 FFSLLAVNYTMQGGDREPGDFSFDPLNMAS--TPAKRAQMELSEIKNGRLAMIGIGGLIH 356
F +A+ T+Q G R PGDFSFDPL +++ A + +L+EIK+GRLAMI GG H
Sbjct: 136 IFGGIALFQTIQ-GTRYPGDFSFDPLGLSAGKNEANLEKYQLAEIKHGRLAMIAFGGFAH 194
Query: 357 QEFYSHKPIMDLLAHPAP 410
Q F + + + + L +P
Sbjct: 195 QYFITKQGVFEQLGTSSP 212
[5][TOP]
>UniRef100_A8KCP5 Light harvesting complex protein 5 n=1 Tax=Guillardia theta
RepID=A8KCP5_GUITH
Length = 235
Score = 120 bits (300), Expect = 8e-26
Identities = 66/138 (47%), Positives = 89/138 (64%), Gaps = 2/138 (1%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFAE 182
EAELKH RI MLA LG+ VQE++T P F + V ++AHD V +GGM Q+LLW F E
Sbjct: 87 EAELKHGRIAMLAVLGWLVQESYTFP---FFDKVSPIEAHDLLVKSGGMSQILLWTSFLE 143
Query: 183 FFSLLAVNYTMQGGDREPGDFSFDPLNMAS--TPAKRAQMELSEIKNGRLAMIGIGGLIH 356
F +A+ T+Q G R PGDFSFDPL +++ A + +L+EIK+GRLAMI GG H
Sbjct: 144 IFGGIALFQTIQ-GTRYPGDFSFDPLGLSAGKNEANLEKYQLAEIKHGRLAMIAFGGFAH 202
Query: 357 QEFYSHKPIMDLLAHPAP 410
Q F + + + + L +P
Sbjct: 203 QYFITKQGVFEQLGTSSP 220
[6][TOP]
>UniRef100_Q9FEL9 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q9FEL9_GALSU
Length = 220
Score = 119 bits (297), Expect = 2e-25
Identities = 65/127 (51%), Positives = 79/127 (62%), Gaps = 3/127 (2%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYF---VNTGGMQQLLLWFC 173
E+ELKHCRI MLA +G+FVQE F LP + A D + F + TG M Q++LW
Sbjct: 84 ESELKHCRIAMLAVVGWFVQEVFHLPNQIYS----ASDPTEAFWKTLATGPMGQIVLWTS 139
Query: 174 FAEFFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLI 353
F E S AV +QG REPG F FDPL + P + +LSE+KNGRLAMI IGGLI
Sbjct: 140 FFEIISTPAVIQMLQGSGREPGYFGFDPLGLGKNPQLYKRFQLSELKNGRLAMIAIGGLI 199
Query: 354 HQEFYSH 374
HQ F +H
Sbjct: 200 HQSFLTH 206
[7][TOP]
>UniRef100_Q8RW55 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q8RW55_GALSU
Length = 220
Score = 118 bits (296), Expect = 2e-25
Identities = 65/127 (51%), Positives = 79/127 (62%), Gaps = 3/127 (2%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYF---VNTGGMQQLLLWFC 173
E+ELKHCRI MLA +G+FVQE F LP + A D + F + TG M Q++LW
Sbjct: 84 ESELKHCRIAMLAVVGWFVQEVFHLPNXIYS----ASDPTEAFWKTLATGPMGQIVLWTS 139
Query: 174 FAEFFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLI 353
F E S AV +QG REPG F FDPL + P + +LSE+KNGRLAMI IGGLI
Sbjct: 140 FFEIISTPAVIQMLQGSGREPGYFGFDPLGLGKNPQLYKRFQLSELKNGRLAMIAIGGLI 199
Query: 354 HQEFYSH 374
HQ F +H
Sbjct: 200 HQSFLTH 206
[8][TOP]
>UniRef100_A8KCR0 Light harvesting complex protein 8 (Fragment) n=1 Tax=Guillardia
theta RepID=A8KCR0_GUITH
Length = 222
Score = 117 bits (292), Expect = 7e-25
Identities = 61/132 (46%), Positives = 78/132 (59%), Gaps = 1/132 (0%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDA-HDYFVNTGGMQQLLLWFCFA 179
EAELKH R+ MLA G VQ+ + P + A HD V G MQQLLLW F
Sbjct: 89 EAELKHGRVCMLAATGMIVQDVYQFPGVTKTFGAAKMTALHDAAVKQGAMQQLLLWLGFI 148
Query: 180 EFFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLIHQ 359
E F +A+ +QG DR+PGDF FDPLN A P A+ +L E+KNGRLAMI G++H
Sbjct: 149 EIFGFVAIVQMLQGSDRQPGDFGFDPLNCAKNPNALARRQLVELKNGRLAMIATAGMLHH 208
Query: 360 EFYSHKPIMDLL 395
F + K ++L+
Sbjct: 209 YFITGKGPIELI 220
[9][TOP]
>UniRef100_Q5K258 Lhc7 protein (Fragment) n=1 Tax=Guillardia theta RepID=Q5K258_GUITH
Length = 176
Score = 114 bits (285), Expect = 4e-24
Identities = 64/133 (48%), Positives = 77/133 (57%), Gaps = 2/133 (1%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPA-SYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFA 179
EAELKHCR+ MLA LG VQ+ FT P S + HD V G M Q+LLW F
Sbjct: 39 EAELKHCRLAMLAALGAIVQDIFTFPGVSKVVGSEKMTGVHDILVKQGAMGQILLWVSFL 98
Query: 180 EFFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLIHQ 359
E F LA+ T+ G R PGDF FDPL R + L+E+KNGRLAM+G GG++H
Sbjct: 99 EVFGTLALFETLDG-KRAPGDFKFDPLGFGKNAQTRERYALAEVKNGRLAMLGFGGMVHG 157
Query: 360 EFYSHK-PIMDLL 395
F + K PI LL
Sbjct: 158 YFLTGKGPIEALL 170
[10][TOP]
>UniRef100_A8KCQ1 Light harvesting complex protein 6 n=1 Tax=Guillardia theta
RepID=A8KCQ1_GUITH
Length = 218
Score = 114 bits (285), Expect = 4e-24
Identities = 64/133 (48%), Positives = 77/133 (57%), Gaps = 2/133 (1%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPA-SYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFA 179
EAELKHCR+ MLA LG VQ+ FT P S + HD V G M Q+LLW F
Sbjct: 81 EAELKHCRLAMLAALGAIVQDIFTFPGVSKVVGSEKMTGVHDILVKQGAMGQILLWVSFL 140
Query: 180 EFFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLIHQ 359
E F LA+ T+ G R PGDF FDPL R + L+E+KNGRLAM+G GG++H
Sbjct: 141 EVFGTLALFETLDG-KRAPGDFKFDPLGFGKNAQTRERYALAEVKNGRLAMLGFGGMVHG 199
Query: 360 EFYSHK-PIMDLL 395
F + K PI LL
Sbjct: 200 YFLTGKGPIEALL 212
[11][TOP]
>UniRef100_Q2IA67 Chloroplast light harvesting protein isoform 12 n=1 Tax=Isochrysis
galbana RepID=Q2IA67_ISOGA
Length = 231
Score = 107 bits (268), Expect = 4e-22
Identities = 53/119 (44%), Positives = 71/119 (59%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFAE 182
EAELKHCR+ MLA +GF + F + F ++AHD V +G M QLLLW E
Sbjct: 105 EAELKHCRVAMLATVGFVFTDFFHISGFDFTT----LEAHDACVASGAMSQLLLWLGLLE 160
Query: 183 FFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLIHQ 359
F + ++ T++G R GDFSFDPL S PAK A +++ E+ NGRLAM G++ Q
Sbjct: 161 VFGFIGIDQTLRGSGRAAGDFSFDPLGFGSDPAKMATLQMKELANGRLAMFAFSGMVTQ 219
[12][TOP]
>UniRef100_Q5K278 Light harvesting protein 5 (Fragment) n=1 Tax=Guillardia theta
RepID=Q5K278_GUITH
Length = 225
Score = 107 bits (267), Expect = 5e-22
Identities = 58/133 (43%), Positives = 78/133 (58%), Gaps = 2/133 (1%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPAS--YFPNNVIAVDAHDYFVNTGGMQQLLLWFCF 176
EAELKHCR+ MLA G Q+ F P + + +++ HD + TG M Q+L W
Sbjct: 91 EAELKHCRVAMLAVAGCIAQDLFRFPGAETVYSSDLKLTKLHDAALKTGTMGQMLFWLGS 150
Query: 177 AEFFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLIH 356
E S AV +QG R+PGDF FDPL + RA++EL+EIKNGRLAMI G+IH
Sbjct: 151 FEAISTAAVIQMLQGSGRKPGDFGFDPLGLGK-GGDRARLELAEIKNGRLAMIAFSGIIH 209
Query: 357 QEFYSHKPIMDLL 395
F + K ++L+
Sbjct: 210 HYFITGKGPIELI 222
[13][TOP]
>UniRef100_Q9FDZ6 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q9FDZ6_GALSU
Length = 229
Score = 105 bits (262), Expect = 2e-21
Identities = 59/136 (43%), Positives = 80/136 (58%), Gaps = 3/136 (2%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFAE 182
E+E+KH RI MLA LGF VQE LP F N V AVDA + V GG+ Q+ L+ E
Sbjct: 86 ESEIKHGRIAMLAALGFIVQEFVHLPGQVFSNKV-AVDAF-FQVPRGGLWQIFLFIGLLE 143
Query: 183 FF---SLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLI 353
F + +R+PGDF FDPL + P R + +++EIKNGRLAM+ +GG I
Sbjct: 144 FVMNKGKMTPLDMFSDPNRKPGDFGFDPLGLGKDPQTRRRYQVAEIKNGRLAMLAVGGFI 203
Query: 354 HQEFYSHKPIMDLLAH 401
H F +H+ +++ L H
Sbjct: 204 HHMFLTHQGVVEQLTH 219
[14][TOP]
>UniRef100_Q4GWU4 Light-harvesting complex protein Lhcc5 n=1 Tax=Rhodomonas sp. CS24
RepID=Q4GWU4_RHDS2
Length = 255
Score = 105 bits (262), Expect = 2e-21
Identities = 61/139 (43%), Positives = 74/139 (53%), Gaps = 8/139 (5%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPA-SYFPNNVIAVDAHDYFV-------NTGGMQQL 158
EAE+KH R+ MLA G VQ+ FT P + N HD F+ N M QL
Sbjct: 86 EAEIKHGRVAMLAATGAIVQDIFTFPGVTSVIGNAKMTGVHDKFLSMEGKGGNQAAMHQL 145
Query: 159 LLWFCFAEFFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIG 338
LLW E F+ +A+ T GGDR PGDF FDPL P +L EIKNGRLAMIG
Sbjct: 146 LLWLGLFEIFTAVAIVQTFNGGDRAPGDFGFDPLGFGK-PNAIETYKLKEIKNGRLAMIG 204
Query: 339 IGGLIHQEFYSHKPIMDLL 395
IGG++H + K + L
Sbjct: 205 IGGMVHHYLLTGKGPLQFL 223
[15][TOP]
>UniRef100_A8KCN4 Light harvesting complex protein 2 n=1 Tax=Guillardia theta
RepID=A8KCN4_GUITH
Length = 215
Score = 100 bits (249), Expect = 7e-20
Identities = 59/142 (41%), Positives = 86/142 (60%), Gaps = 5/142 (3%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFAE 182
EAELKH R+ ML LGF VQE F LP F + ++A + V TGG+ Q+ E
Sbjct: 78 EAELKHGRVCMLGTLGFLVQEKFQLPLPGFGEK-LPIEAF-FTVPTGGLWQIFFTLGAIE 135
Query: 183 FFSLLAVNYTMQGGD-----REPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGG 347
+L+ N + GD R PGD FDPLN++S + + EL+E+K+GRLAMIG+GG
Sbjct: 136 ---ILSNNGRISPGDMFADGRAPGDLGFDPLNLSSDESALRRFELAELKHGRLAMIGLGG 192
Query: 348 LIHQEFYSHKPIMDLLAHPAPI 413
++HQ+ + +P ++ LA+ P+
Sbjct: 193 MLHQQLLTKQPTLEQLANFQPL 214
[16][TOP]
>UniRef100_Q5K250 Light harvesting complex 8 (Fragment) n=1 Tax=Guillardia theta
RepID=Q5K250_GUITH
Length = 155
Score = 99.0 bits (245), Expect = 2e-19
Identities = 52/120 (43%), Positives = 70/120 (58%), Gaps = 2/120 (1%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFP-NNVIAVDAHDYFVNTGGMQQLLLWFCFA 179
EAE+KH R+ MLA G VQ+ + P + + H+ V G MQQLLLW
Sbjct: 10 EAEIKHGRVAMLAATGMIVQDLYKFPGVQKTFGDAAMMKLHNLAVEQGAMQQLLLWLGLL 69
Query: 180 EFFS-LLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLIH 356
E + L AV ++G +R PGDF FDPL P A+ +L+E+KNGRLAMI +GG++H
Sbjct: 70 EILTGLPAVIQGLKGSERTPGDFGFDPLGCGRNPETLARRQLTELKNGRLAMIAVGGMVH 129
[17][TOP]
>UniRef100_B8LE61 Photosystem I light harvesting protein (Fragment) n=1
Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LE61_THAPS
Length = 145
Score = 99.0 bits (245), Expect = 2e-19
Identities = 58/121 (47%), Positives = 75/121 (61%), Gaps = 3/121 (2%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVI--AVDAHDYFVNTGGMQQLLLWFCF 176
EAELKH R MLA +G V E +P F I +DAHD ++T M+Q+LLW
Sbjct: 19 EAELKHGRQAMLAVVGMVVPEFVRIPGEAFSFEAIPNVLDAHDALLDTS-MKQILLWISL 77
Query: 177 AEFFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRA-QMELSEIKNGRLAMIGIGGLI 353
E SL A++ M DREPG+F FDPL M A +A +M+L E+KNGRLAM+ IGG++
Sbjct: 78 MEAMSLGALS-NMNEFDREPGNFGFDPLGMMPKDAAKAKEMQLKELKNGRLAMVAIGGMV 136
Query: 354 H 356
H
Sbjct: 137 H 137
[18][TOP]
>UniRef100_B7FQE1 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7FQE1_PHATR
Length = 215
Score = 97.1 bits (240), Expect = 7e-19
Identities = 56/132 (42%), Positives = 73/132 (55%), Gaps = 6/132 (4%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQE----AFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWF 170
EAELKH RI M+A GF + + LP Y + +V AHD V GGM Q+LLWF
Sbjct: 82 EAELKHGRICMMATAGFAAVDLGLRVYPLPEGY--EGLTSVTAHDALVKQGGMGQMLLWF 139
Query: 171 CFAEFFSLLAVNYTMQGGDREPGDFSFDPLN-MASTPAKRAQ-MELSEIKNGRLAMIGIG 344
F E F +AV + G R PGDF FDP + + AK+ + M L E+ NGRLAM+
Sbjct: 140 SFLEIFDTVAVIQMLNGSGRRPGDFGFDPAGFLKNADAKKEEDMMLKELTNGRLAMLAFS 199
Query: 345 GLIHQEFYSHKP 380
G++ Q + P
Sbjct: 200 GMVTQAVLTQGP 211
[19][TOP]
>UniRef100_Q2IA66 Chloroplast light harvesting protein isoform 13 n=1 Tax=Isochrysis
galbana RepID=Q2IA66_ISOGA
Length = 211
Score = 92.4 bits (228), Expect = 2e-17
Identities = 53/132 (40%), Positives = 74/132 (56%), Gaps = 5/132 (3%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPA--SYFPNNVIAVDAHDYFVNTGGMQQLLLWFCF 176
EAELKH RI MLA G+F QE LP Y PN + A + V+ + Q++L+
Sbjct: 75 EAELKHGRICMLAATGYFFQEFLALPGFPGYTPNGIEAATS----VSPESLAQIVLFMSV 130
Query: 177 AEFFSLL---AVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGG 347
E+ S L + REPG+ FDPL+ A RA++E++E+KNGRLAM+ G
Sbjct: 131 VEYNSNLNKWTQDTMFTDPKREPGNLGFDPLHFGDNKASRARLEMAELKNGRLAMLAFSG 190
Query: 348 LIHQEFYSHKPI 383
+IHQ + KP+
Sbjct: 191 MIHQTLVTGKPV 202
[20][TOP]
>UniRef100_A8KCR8 Light harvesting complex protein 10 n=1 Tax=Guillardia theta
RepID=A8KCR8_GUITH
Length = 257
Score = 92.4 bits (228), Expect = 2e-17
Identities = 57/130 (43%), Positives = 71/130 (54%), Gaps = 12/130 (9%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAV----DAHDYFVNT--GG-----M 149
EAELKH R+ MLA G VQ+ FT P + VI AHD +++ GG M
Sbjct: 86 EAELKHGRVAMLAATGAIVQDIFTFPGV---DKVIGAAKMTSAHDKYLSLEIGGSKVATM 142
Query: 150 QQLLLWFCFAEFFSLLAVNYTMQGG-DREPGDFSFDPLNMASTPAKRAQMELSEIKNGRL 326
Q+LLW E S A+ T +G R PGDF FDPL + + L E+KNGRL
Sbjct: 143 HQMLLWIGLLEILSAPAIVQTFKGETSRAPGDFGFDPLGFSKDAKSASTYRLKEVKNGRL 202
Query: 327 AMIGIGGLIH 356
AMIGIGG++H
Sbjct: 203 AMIGIGGMVH 212
[21][TOP]
>UniRef100_A8KCR3 Light harvesting complex protein 9 n=1 Tax=Guillardia theta
RepID=A8KCR3_GUITH
Length = 220
Score = 92.4 bits (228), Expect = 2e-17
Identities = 60/137 (43%), Positives = 77/137 (56%), Gaps = 6/137 (4%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFAE 182
E+ELKH R+ MLA LG+ VQE LP +N + +A Y V GG+ Q+ + E
Sbjct: 80 ESELKHGRVCMLASLGYIVQEFVHLPFEA-TSNPVGSEAF-YQVPAGGLWQIFAFIGAIE 137
Query: 183 FFSLLAVNYTMQGGD-----REPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGG 347
FS N+ M G R PG+F FDPL P RA+ EL+E+KNGRLAM+G G
Sbjct: 138 HFSH---NFKMSGSTMFSDGRTPGNFGFDPLGFGKNPQARARYELAELKNGRLAMLGFSG 194
Query: 348 LIHQEFYSHK-PIMDLL 395
+IH F + K PI LL
Sbjct: 195 MIHGSFITGKGPINALL 211
[22][TOP]
>UniRef100_B3VBH6 Light harvesting complex protein (Fragment) n=1 Tax=Vaucheria
litorea RepID=B3VBH6_VAULI
Length = 105
Score = 89.4 bits (220), Expect = 2e-16
Identities = 51/109 (46%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Frame = +3
Query: 18 HCRITMLACLGFFVQEAFTLPASYFPNNVIAVD---AHDYFVNTGGMQQLLLWFCFAEFF 188
H RI MLA G+ V + + P +V VD AHD V G M Q+LLW E
Sbjct: 1 HGRICMLAVAGWIVVDL----GLHLPGDVHLVDSLTAHDNAVRFGAMSQILLWVSMFEAV 56
Query: 189 SLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMI 335
S +AV + G R+PG+F FDPL AS P+KRA++ L+EIKNGRLAM+
Sbjct: 57 SSVAVFQMLNGSGRKPGEFGFDPLKFASDPSKRAKLALNEIKNGRLAMV 105
[23][TOP]
>UniRef100_Q9FEM1 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q9FEM1_GALSU
Length = 227
Score = 88.6 bits (218), Expect = 3e-16
Identities = 56/135 (41%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYF--PNNVIAVDAHDYFVNTGGMQQLLLWFCF 176
E+ELKHCRI MLA +GF VQE LP F P+ + A+ V G Q+ L
Sbjct: 93 ESELKHCRIAMLAVVGFIVQEFIHLPGDVFSNPHPMQAIGQ----VPVAGWVQIFLLVAI 148
Query: 177 AEFFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLIH 356
E + A+ T+QG +REPG F FDPL +A + LSE+KNGRLAMI +
Sbjct: 149 LEMIDIAAIKETLQG-NREPGYFGFDPLGLAKDKQAHDRYLLSELKNGRLAMIASIAFMV 207
Query: 357 QEFYSHKPIMDLLAH 401
Q S++ I+ L H
Sbjct: 208 QSSRSNEGIIAQLTH 222
[24][TOP]
>UniRef100_Q7XY91 Light-harvest protein (Fragment) n=1 Tax=Griffithsia japonica
RepID=Q7XY91_GRIJA
Length = 120
Score = 87.4 bits (215), Expect = 6e-16
Identities = 45/112 (40%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
Frame = +3
Query: 63 EAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFAEFFSLLAVNYTMQG-GDREPG 239
E +T P Y +A++ HD+ V G M+Q+LLW F E ++ A+ + G GDR PG
Sbjct: 1 ELYTFPF-YSGAPHLAINRHDWGVENGSMKQILLWCSFFEIMTMPALVQMLNGQGDRVPG 59
Query: 240 DFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLIHQEFYSHKPIMDLL 395
DF FDPL + PAK A +++E+KNGRLAM + G IH +++ +++ L
Sbjct: 60 DFCFDPLGLGKDPAKLAVFKVNEVKNGRLAMCAVSGAIHHAAITNQNLVEQL 111
[25][TOP]
>UniRef100_Q5K274 Light harvesting protein 6 (Fragment) n=1 Tax=Guillardia theta
RepID=Q5K274_GUITH
Length = 213
Score = 87.4 bits (215), Expect = 6e-16
Identities = 56/137 (40%), Positives = 72/137 (52%), Gaps = 12/137 (8%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAV----DAHDYFVNT--GG-----M 149
EAELKH R+ MLA G VQ+ FT P + VI AHD +++ GG M
Sbjct: 66 EAELKHGRVAMLAATGAIVQDIFTFPGV---DKVIGAAKMTSAHDKYLSLEIGGSKVATM 122
Query: 150 QQLLLWFCFAEFFSLLAVNYTMQGG-DREPGDFSFDPLNMASTPAKRAQMELSEIKNGRL 326
Q+LLW E S A+ T +G R PGDF FDPL + + L E+KNGRL
Sbjct: 123 HQMLLWIGLLEILSDPAIVQTFKGETSRAPGDFGFDPLGFSKDAKSASTYRLKEVKNGRL 182
Query: 327 AMIGIGGLIHQEFYSHK 377
+MIGIG ++H + K
Sbjct: 183 SMIGIGRMVHHYLLTGK 199
[26][TOP]
>UniRef100_Q5K269 Light harvesting protein 7 (Fragment) n=1 Tax=Guillardia theta
RepID=Q5K269_GUITH
Length = 203
Score = 87.4 bits (215), Expect = 6e-16
Identities = 53/120 (44%), Positives = 68/120 (56%), Gaps = 2/120 (1%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLP--ASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCF 176
EAE+KH RI MLA +G F E LP AS+ N + A Y ++ G Q+ ++
Sbjct: 65 EAEIKHGRICMLAVVGMFHPEIAKLPQFASFSTNPLEAF----YQLSFAGWLQIFVFIGI 120
Query: 177 AEFFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLIH 356
E FS V YT D+ PGD FDPL + S PA R +E+KNGRLAMIG GG++H
Sbjct: 121 CESFSFEKVYYT----DKAPGDLGFDPLRLGSNPASRKYYANAEVKNGRLAMIGFGGMLH 176
[27][TOP]
>UniRef100_A8KCP1 Light harvesting complex protein 4 (Fragment) n=1 Tax=Guillardia
theta RepID=A8KCP1_GUITH
Length = 232
Score = 87.4 bits (215), Expect = 6e-16
Identities = 57/136 (41%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFAE 182
EAELKH RI MLA G VQE LP F +A+DA GGM +L+ E
Sbjct: 79 EAELKHGRICMLAWTGCLVQEVIHLPGEAFSKK-LALDAWAS-APRGGMISILVAIGLIE 136
Query: 183 FFS---LLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLI 353
S L R PGD FDPL++ + PA RA+ ELSE+ +GR AM+G G+I
Sbjct: 137 MISNRFQLTATDMFANPARVPGDLGFDPLSLGNNPATRAKYELSEVIHGRAAMMGFSGVI 196
Query: 354 HQEFYSHKPIMDLLAH 401
HQ + +PI+ L H
Sbjct: 197 HQMIVTKQPIIYSLLH 212
[28][TOP]
>UniRef100_A8KCN9 Light harvesting complex protein 3 n=1 Tax=Guillardia theta
RepID=A8KCN9_GUITH
Length = 218
Score = 87.4 bits (215), Expect = 6e-16
Identities = 53/120 (44%), Positives = 68/120 (56%), Gaps = 2/120 (1%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLP--ASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCF 176
EAE+KH RI MLA +G F E LP AS+ N + A Y ++ G Q+ ++
Sbjct: 80 EAEIKHGRICMLAVVGMFHPEIAKLPQFASFSTNPLEAF----YQLSFAGWLQIFVFIGI 135
Query: 177 AEFFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLIH 356
E FS V YT D+ PGD FDPL + S PA R +E+KNGRLAMIG GG++H
Sbjct: 136 CESFSFEKVYYT----DKAPGDLGFDPLRLGSNPASRKYYANAEVKNGRLAMIGFGGMLH 191
[29][TOP]
>UniRef100_B7G502 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G502_PHATR
Length = 206
Score = 86.3 bits (212), Expect = 1e-15
Identities = 53/120 (44%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVI--AVDAHDYFVNTGGMQQLLLWFCF 176
E+ELKH R MLA GF V E +P + I +DAHD M Q+ W F
Sbjct: 77 ESELKHGRAAMLAVAGFVVPEFVRVPGEAYSFAAIPNVIDAHDALPQA--MIQIFAWISF 134
Query: 177 AEFFSLLAVNYTMQGGDREPGDFSFDPLNM-ASTPAKRAQMELSEIKNGRLAMIGIGGLI 353
E S A+ M DR PGDF FDPL + AK+ QM+L E+KNGRLAM+ IGG++
Sbjct: 135 VEAVSFPALA-NMNEFDRVPGDFGFDPLKLYPKDAAKQEQMQLKELKNGRLAMVAIGGMV 193
[30][TOP]
>UniRef100_P93449 Light-harvesting complex I polypeptide n=1 Tax=Porphyridium
purpureum RepID=P93449_PORCR
Length = 222
Score = 85.9 bits (211), Expect = 2e-15
Identities = 58/135 (42%), Positives = 73/135 (54%), Gaps = 7/135 (5%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQE-----AFTLPASYFP--NNVIAVDAHDYFVNTGGMQQLL 161
EAELKH RI MLA LGF E + P YF N + AV A + T G+ Q++
Sbjct: 82 EAELKHGRICMLAALGFIYPEIMGGKSIPSPEGYFTELNPLKAVKA----IPTAGLLQIV 137
Query: 162 LWFCFAEFFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGI 341
L+ E S N PGDF FDPL + K +MELSE+KNGRLAMI +
Sbjct: 138 LFVMVLEAISW---NKVFMDKTSAPGDFKFDPLGL-----KSPKMELSEVKNGRLAMIAV 189
Query: 342 GGLIHQEFYSHKPIM 386
GG+IHQ + +PI+
Sbjct: 190 GGMIHQVLLTKQPIL 204
[31][TOP]
>UniRef100_Q5K281 Light harvesting complex protein (Fragment) n=1 Tax=Guillardia
theta RepID=Q5K281_GUITH
Length = 235
Score = 85.1 bits (209), Expect = 3e-15
Identities = 57/136 (41%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFAE 182
EAELKH RI MLA G VQE LP S +A+DA GGM +L+ E
Sbjct: 82 EAELKHGRICMLAWTGCLVQEVIHLPESAEAKK-LALDAWAS-APRGGMISILVAIGLIE 139
Query: 183 FFS---LLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLI 353
S L R PGD FDPL++ + PA RA+ ELSE+ +GR AM+G G+I
Sbjct: 140 MISNRFQLTATDMFANPARVPGDLGFDPLSLGNNPATRAKYELSEVIHGRAAMMGFSGVI 199
Query: 354 HQEFYSHKPIMDLLAH 401
HQ + +PI+ L H
Sbjct: 200 HQMIVTKQPIIYSLLH 215
[32][TOP]
>UniRef100_B8C0K3 Fucoxanthin chl a/c light-harvesting protein n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8C0K3_THAPS
Length = 203
Score = 84.0 bits (206), Expect = 6e-15
Identities = 52/129 (40%), Positives = 70/129 (54%), Gaps = 3/129 (2%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFF-VQEAFTL-PASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCF 176
EAELKH RI M+A LGF V F + PA+ ++ ++ AHD V GGM Q+LLWF
Sbjct: 71 EAELKHGRICMMAWLGFVAVDMGFRVYPAAEGFESLTSITAHDAAVEQGGMSQMLLWFSL 130
Query: 177 AEFFSLLAVNYTMQGGDREPGDFSFD-PLNMASTPAKRAQMELSEIKNGRLAMIGIGGLI 353
E F +AV ++G R PGDF D + A+ M+L EI + RLAM G++
Sbjct: 131 LEVFDTIAVQQMLEGSGRAPGDFGLDGGFLKGKSQAEIDTMKLKEIVHCRLAMFAFSGVV 190
Query: 354 HQEFYSHKP 380
Q + P
Sbjct: 191 TQAVLTQGP 199
[33][TOP]
>UniRef100_Q9FEM0 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q9FEM0_GALSU
Length = 219
Score = 83.2 bits (204), Expect = 1e-14
Identities = 52/133 (39%), Positives = 76/133 (57%), Gaps = 2/133 (1%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNN--VIAVDAHDYFVNTGGMQQLLLWFCF 176
EAE+KHCRI MLA LG+ E + LP+ F N + A+ F G+ Q+LL
Sbjct: 82 EAEIKHCRICMLAALGWVFPEFWHLPSEVFSNTSPLAALGQVPKF----GLIQILLLVVA 137
Query: 177 AEFFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLIH 356
E SL + + ++EPGDF FDPL + +K+ M+ +EIKNGRLAMI +G H
Sbjct: 138 LEAISLDKLEF---HPEKEPGDFGFDPLGLGKGKSKK-WMQTAEIKNGRLAMIAMGAFFH 193
Query: 357 QEFYSHKPIMDLL 395
Q +++ +++ L
Sbjct: 194 QNLLTNQGVIEQL 206
[34][TOP]
>UniRef100_Q7XY93 Light-harvest protein (Fragment) n=1 Tax=Griffithsia japonica
RepID=Q7XY93_GRIJA
Length = 102
Score = 80.1 bits (196), Expect = 9e-14
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Frame = +3
Query: 120 HDYFVNTGGMQQLLLWFCFAEFFSLLAVNYTMQG-GDREPGDFSFDPLNMASTPAKRAQM 296
H+ V G M+Q+LLW F E ++ AV + G DR PGDF FDPL + PAK A
Sbjct: 1 HEGGVENGSMEQILLWCSFFEIMTMPAVFQMLSGKSDRAPGDFCFDPLGLGKDPAKMAVF 60
Query: 297 ELSEIKNGRLAMIGIGGLIHQEFYSHKPIMDLL 395
+++E+KNGRLAM + G IH +++ +++ L
Sbjct: 61 KVNEVKNGRLAMCAVSGAIHHAAITNQNLVEQL 93
[35][TOP]
>UniRef100_Q53IY4 Light-harvesting complex protein Lhcc2 n=1 Tax=Rhodomonas sp. CS24
RepID=Q53IY4_RHDS2
Length = 224
Score = 79.7 bits (195), Expect = 1e-13
Identities = 50/127 (39%), Positives = 69/127 (54%), Gaps = 2/127 (1%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLP-ASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFA 179
EAE+KH RI MLA G VQ+ +T P S + H+ + +G M Q+L +
Sbjct: 76 EAEVKHGRICMLAATGSLVQDLYTFPFMSKWYKGEKMWGLHEAAIKSGAMWQVLFFVGLL 135
Query: 180 EF-FSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLIH 356
E F L N ++ G GD FDPL + + P A+ +++EIKNGRLAMI IGG+ H
Sbjct: 136 EIPFMLKLANGSVDG----TGDLGFDPLGLKNDPETFARRQVTEIKNGRLAMIAIGGMTH 191
Query: 357 QEFYSHK 377
F + K
Sbjct: 192 HYFLTGK 198
[36][TOP]
>UniRef100_Q9LKN9 Light-harvesting complex protein LHCC4 (Fragment) n=1
Tax=Guillardia theta RepID=Q9LKN9_GUITH
Length = 219
Score = 77.4 bits (189), Expect = 6e-13
Identities = 52/131 (39%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEA-FTLPA--SYFPNNVIAVDAHDYFVNTGGMQQLLLWFC 173
EAE+KH RI MLA G V+ A P S F + H+ V G M Q+LLW
Sbjct: 87 EAEIKHGRIAMLAFAGIMVEAAGIKAPGVESVFGPTKDIFEIHNLAVEKGSMGQILLWTG 146
Query: 174 FAEF-FSLLAVNYTMQ--GGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIG 344
F E A+N + R PGDF FDPL + A+ +LSEIKNGRLAM+ +
Sbjct: 147 FLEMVIGWPAMNEMLNDPSSKRIPGDFGFDPLGLGK--GSMARKQLSEIKNGRLAMLAVS 204
Query: 345 GLIHQEFYSHK 377
G++H + K
Sbjct: 205 GIVHHTLITGK 215
[37][TOP]
>UniRef100_B8C0K4 Fucoxanthin chlorophyll a/c light-harvesting protein, lhcr type n=1
Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C0K4_THAPS
Length = 203
Score = 75.9 bits (185), Expect = 2e-12
Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEA----FTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWF 170
E+E+KH R+ M+A G+ + + LP S V + AHD V G M + +W
Sbjct: 72 ESEIKHGRVCMMAWAGYVAVDLGARIYPLPESM--QGVTSATAHDPAVAFGSMGNMFIWI 129
Query: 171 CFAEFFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGL 350
E + ++ T+QG REPGDF + M T A+ M+L E+ NGR AM+ G+
Sbjct: 130 ALFEMVGWIGLSQTLQGSGREPGDFGWGKQFMGKTQAEIDTMKLKELTNGRAAMLAFAGV 189
Query: 351 IHQ 359
+ Q
Sbjct: 190 VTQ 192
[38][TOP]
>UniRef100_Q9LKN8 Light-harvesting complex protein LHCC10 (Fragment) n=1
Tax=Guillardia theta RepID=Q9LKN8_GUITH
Length = 224
Score = 75.5 bits (184), Expect = 2e-12
Identities = 48/128 (37%), Positives = 68/128 (53%), Gaps = 3/128 (2%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPA--SYFPNNVIAVDAHDYFVNTGGMQQLLLWFCF 176
EAE+KH RI MLA G VQ+ + P +F + HD + +G + Q+L +
Sbjct: 76 EAEVKHGRICMLAATGSIVQDLYHFPFMDKWFKGEKMW-GLHDAAIKSGALWQVLFFIGL 134
Query: 177 AEF-FSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLI 353
E F L N T+ G GD FDPL + + P A+ +++E+KNGRLAMI I G+
Sbjct: 135 LELPFLLKLANGTVDG----TGDIGFDPLGLKNDPETFARRQVTEVKNGRLAMIAISGMT 190
Query: 354 HQEFYSHK 377
H F + K
Sbjct: 191 HHYFLTGK 198
[39][TOP]
>UniRef100_Q7XY90 Light-harvest protein n=1 Tax=Griffithsia japonica
RepID=Q7XY90_GRIJA
Length = 213
Score = 75.5 bits (184), Expect = 2e-12
Identities = 54/140 (38%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFAE 182
EAE+KH R++MLA LG VQE LPA F N +A +A + V + G+ Q+ L+ FAE
Sbjct: 77 EAEIKHGRVSMLAVLGMLVQEFIHLPAKGF-ENPLATEAF-FQVPSAGLFQIFLFCGFAE 134
Query: 183 FF---SLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLI 353
+ L+ + G PG+ F+P+N+ + + R L EIKNGRLAM GG I
Sbjct: 135 LYLHKGKLSPSDMFSDG-ATPGELGFNPMNLDVSDSLR----LKEIKNGRLAMCASGGFI 189
Query: 354 HQEFYSHKPIMDLLAHPAPI 413
H PI+ L P+
Sbjct: 190 HSMLLYKTPIIAQLLDFQPL 209
[40][TOP]
>UniRef100_A8KCS2 Light harvesting complex protein 11 n=1 Tax=Guillardia theta
RepID=A8KCS2_GUITH
Length = 225
Score = 75.1 bits (183), Expect = 3e-12
Identities = 47/127 (37%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLP-ASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFA 179
EAE+KH RI MLA G VQ+ + P + HD + +G + Q+L +
Sbjct: 77 EAEIKHGRICMLAATGSIVQDLYHFPFIDKWYKGEKMWGLHDAAIKSGALWQVLFFIGLL 136
Query: 180 EF-FSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLIH 356
E F L N T+ G GD FDPL + + P A+ +++E+KNGRLAMI I G+ H
Sbjct: 137 ELPFLLKLANGTVDG----TGDIGFDPLGLKNDPETFARRQVTEVKNGRLAMIAISGMTH 192
Query: 357 QEFYSHK 377
F + K
Sbjct: 193 HYFLTGK 199
[41][TOP]
>UniRef100_Q7XYZ2 Light-harvesting complex I polypeptide (Fragment) n=1
Tax=Griffithsia japonica RepID=Q7XYZ2_GRIJA
Length = 168
Score = 73.6 bits (179), Expect = 9e-12
Identities = 51/129 (39%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Frame = +3
Query: 6 AELKHCRITMLACLGFFVQEAFTLPASYF--PNNVIAVDAHDYFVNTGGMQQLLLWFCFA 179
AE+KH RI MLA LG VQE LP + F PN + A+ Y V G Q++ C
Sbjct: 45 AEIKHGRICMLATLGMLVQEVVHLPNAAFSEPNPLKAI----YAVPIEGWVQIITVICLV 100
Query: 180 EFFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLIHQ 359
E S A T D FDP+ + TP K +++L E+KNGRLA+I G I Q
Sbjct: 101 ELASFKATYET-------GADLGFDPMGLG-TPDKIEELKLKEVKNGRLAIIACTGFIFQ 152
Query: 360 EFYSHKPIM 386
+ KPI+
Sbjct: 153 ILVTGKPIL 161
[42][TOP]
>UniRef100_B7G503 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G503_PHATR
Length = 198
Score = 73.2 bits (178), Expect = 1e-11
Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVI--AVDAHDYFVNTGGMQQLLLWFCF 176
E+EL+H R MLA +GF + +P + I +DAHD + +G M QLLLW
Sbjct: 68 ESELRHGRTAMLAVVGFIATDFVRIPGEAYSFAAIPKTIDAHDALLKSGPMYQLLLWIGL 127
Query: 177 AEFFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLIH 356
+ G+R PGDF + L AK + + SE+ NGRLAM+ +GG+
Sbjct: 128 WDLIVTAPAAVAAAKGERTPGDFGWT-LMAPKDDAKMQKKKDSELLNGRLAMVAVGGIAT 186
Query: 357 Q 359
Q
Sbjct: 187 Q 187
[43][TOP]
>UniRef100_Q53IY6 Light-harvesting complex protein Lhcc4 n=1 Tax=Rhodomonas sp. CS24
RepID=Q53IY6_RHDS2
Length = 238
Score = 72.4 bits (176), Expect = 2e-11
Identities = 53/128 (41%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLP---ASYFPNNVIAVDAHDYFVNTGGMQQLLLWFC 173
EAE+KH RI MLA G VQ+ FTLP Y V A+ HD V+ G Q+LL
Sbjct: 76 EAEVKHGRIAMLAATGLIVQDLFTLPFYGKWYTGEKVWAL--HDKLVSVGAAWQVLLAIG 133
Query: 174 FAEFFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLI 353
EF +N ++G GD+ FDPL++ S +RA ++EIKNGRLAMI GG++
Sbjct: 134 ALEF---PFINKCIEGTLDGTGDYGFDPLSLKSD--RRA---VTEIKNGRLAMIAFGGMM 185
Query: 354 HQEFYSHK 377
+ K
Sbjct: 186 QHYLLTGK 193
[44][TOP]
>UniRef100_Q2IA41 Chloroplast light harvesting protein isoform 1 n=1 Tax=Karlodinium
micrum RepID=Q2IA41_KARMI
Length = 290
Score = 72.4 bits (176), Expect = 2e-11
Identities = 52/163 (31%), Positives = 71/163 (43%), Gaps = 15/163 (9%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAF--------TLPASYFPNNVIAVDAHDYFVNTGGMQQL 158
E ELKH R+ MLA LG V E F +PA + ++A F+ + +
Sbjct: 102 EVELKHGRLAMLAALGMLVAEQFHPLFGGEIDVPAILAFRETLQLEARSKFIYIAVLFSI 161
Query: 159 LLWFCFAEFFSLLAVNYTMQGG------DREPGDFSFDPLNMASTPAKR-AQMELSEIKN 317
+ E FS+ N G D EPG+ FDPL + +M+ E+ N
Sbjct: 162 FI----PEVFSVFTFNSPAGGEPWSIREDHEPGNLGFDPLGLKPKDTSEFKEMQTKELNN 217
Query: 318 GRLAMIGIGGLIHQEFYSHKPIMDLLAHPAPILNVNM*FFFLS 446
GRLAM+G G+I QE I D A P P + F+LS
Sbjct: 218 GRLAMLGAAGMIAQELVKTDKIFDNFADPLPRELAELLLFYLS 260
[45][TOP]
>UniRef100_Q7XY92 Light-harvest protein (Fragment) n=1 Tax=Griffithsia japonica
RepID=Q7XY92_GRIJA
Length = 206
Score = 72.0 bits (175), Expect = 3e-11
Identities = 43/118 (36%), Positives = 55/118 (46%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFAE 182
EAELKH RI MLA LG+ E + PN + Y V + G ++ F
Sbjct: 68 EAELKHGRICMLAILGWVFPEL----VGHLPNEAYSATNPLYAVGSVGWLPIIQILAFIA 123
Query: 183 FFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLIH 356
V PG++ FDP + + P + EL+EIKNGRLAM IGG IH
Sbjct: 124 ICEAKGVAKVYDENCANPGNYGFDPFGLTANPKTKQHYELAEIKNGRLAMCAIGGAIH 181
[46][TOP]
>UniRef100_B7FUM6 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7FUM6_PHATR
Length = 200
Score = 72.0 bits (175), Expect = 3e-11
Identities = 45/129 (34%), Positives = 69/129 (53%), Gaps = 8/129 (6%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGG---MQQLLLWFC 173
E+E+KH R MLA +GF +Q+ +TLP ++ VD + G M Q++
Sbjct: 71 ESEIKHGRAAMLATVGFVMQQFWTLPG------MVHVDDSNLAPGAAGISPMLQIVFGMG 124
Query: 174 FAEFFS---LLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQ--MELSEIKNGRLAMIG 338
E+++ + + REPG+ FDP+ M+ +K M+L EIKNGRLAM+
Sbjct: 125 ALEWWTNKGKVTMEDMFSDSSREPGNLGFDPMGMSKNKSKEEAEAMQLKEIKNGRLAMLA 184
Query: 339 IGGLIHQEF 365
IGG+IH +
Sbjct: 185 IGGMIHHNW 193
[47][TOP]
>UniRef100_Q9LKN7 Light-harvesting complex protein LHCC13 n=1 Tax=Guillardia theta
RepID=Q9LKN7_GUITH
Length = 238
Score = 71.6 bits (174), Expect = 3e-11
Identities = 53/129 (41%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLP---ASYFPNNVIAVDAHDYFVNTGGMQQLLLWFC 173
EAE+KH RI MLA G VQ+ FT P Y V A+ HD V G Q+LL+
Sbjct: 76 EAEVKHGRIAMLAATGLIVQDLFTFPFYSKWYTGEKVWAL--HDKLVKVGAAWQVLLFLF 133
Query: 174 FAEF-FSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGL 350
E F A++ T+ G GD+ FDPL + S +RA ++EIKNGRLAMI GG+
Sbjct: 134 ALEIPFIQKAIDGTLDG----TGDYGFDPLGLKSD--RRA---VTEIKNGRLAMIAFGGM 184
Query: 351 IHQEFYSHK 377
+ + K
Sbjct: 185 MQHYLLTGK 193
[48][TOP]
>UniRef100_B8C8Q0 Fucoxanthin chl a/c light-harvesting protein, lhcr type n=1
Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C8Q0_THAPS
Length = 204
Score = 71.6 bits (174), Expect = 3e-11
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPA--------SYFPNNVIAVDAHDYFVNTGGMQQL 158
E+E+KH R+ MLA GF + P S V+ + A V G+++
Sbjct: 71 ESEIKHGRVAMLASAGFIASQFVNFPMYSSMHVDDSNMAPTVVGISAMLQIVCAAGVEE- 129
Query: 159 LLWFCFAEFFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRA--QMELSEIKNGRLAM 332
W + ++ + +T DR PGDF FDP+ ++ A +M+L EIKNGRLAM
Sbjct: 130 --WRTYKGQVTMEDM-FTGDMADRTPGDFGFDPMGQLKGKSEAAVNEMKLKEIKNGRLAM 186
Query: 333 IGIGGLIHQEF 365
+ IGG+IH F
Sbjct: 187 LAIGGMIHHNF 197
[49][TOP]
>UniRef100_B7G9B9 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G9B9_PHATR
Length = 216
Score = 71.6 bits (174), Expect = 3e-11
Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAF-TLPASYFPNNVIAVDA-------HDYFVNTGGMQQL 158
EAE+KHCR+ M+A G E F P DA H ++ G +
Sbjct: 78 EAEIKHCRVAMMAVAGVLWVELFGPAPGCEMATAKSQTDAFWQLWQAHPQYIAFGFIMTG 137
Query: 159 LLWFCFAEFFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIG 338
L+ E + +A+ + G R PGDF DPL + + PAK + L+E+KNGRLAM
Sbjct: 138 LV-----EMITGIAITTGRESGQRAPGDFGLDPLKIKNNPAKWEKYSLNEVKNGRLAMFA 192
Query: 339 IGGLIHQEFYSHKPIMDLLA 398
G + Q + +H+ + L+
Sbjct: 193 AAGQLMQSWTTHEGAFENLS 212
[50][TOP]
>UniRef100_A8KCN1 Light harvesting complex protein 1 (Fragment) n=1 Tax=Guillardia
theta RepID=A8KCN1_GUITH
Length = 216
Score = 71.2 bits (173), Expect = 4e-11
Identities = 44/126 (34%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLP-ASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFA 179
EAE+KH R+ MLA G VQ+ + P + HD + +G + Q+L +
Sbjct: 68 EAEVKHGRVCMLAATGAIVQDLYHFPFIDKWYQGEKMWGLHDAAIKSGALWQVLFFIGLL 127
Query: 180 EFFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLIHQ 359
E LL + G GD FDPL + + P A+ +++E+KNGRLAMI I G+ H
Sbjct: 128 ELPFLLKLRDGTVDGT---GDIGFDPLGLKNDPDAFARRQITEVKNGRLAMIAISGMTHH 184
Query: 360 EFYSHK 377
F + K
Sbjct: 185 YFLTGK 190
[51][TOP]
>UniRef100_B7FQE0 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7FQE0_PHATR
Length = 202
Score = 70.5 bits (171), Expect = 7e-11
Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFAE 182
E+E+KH RI MLA +G+ + + Y + + + AHD + G M L+W E
Sbjct: 73 ESEIKHGRICMLAVVGYIATDLGIIVHPY-GSGLTSATAHDALLEKGVMGNALIWIGALE 131
Query: 183 FFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKR-AQMELSEIKNGRLAMIGIGGLIHQ 359
S +A +QG REPG F F + A++ +++ EI NGRLAM+ GG++ Q
Sbjct: 132 MVSYIATAEMLQGSGREPGYFGFGTKYLDGKSAEQIKKIKYQEIMNGRLAMLAFGGMVTQ 191
[52][TOP]
>UniRef100_B8LE60 Putative uncharacterized protein (Fragment) n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8LE60_THAPS
Length = 131
Score = 69.7 bits (169), Expect = 1e-10
Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 3/122 (2%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVI--AVDAHDYFVNTGGMQQLLLWFCF 176
E+E++H R MLA GF VQ+ +P + + V AHD + G M QLLLW
Sbjct: 2 ESEIRHGRTAMLAVTGFIVQDFVRIPGDAYSFEAVPKTVGAHDALLE-GPMHQLLLWISL 60
Query: 177 AEF-FSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLI 353
+ + ++ TM+ G+REPGDF + L A + E++E+ NGRLAM+ +GG+
Sbjct: 61 WDIVITYPSIQATMK-GEREPGDFGWKWL-APKDEATLKKYEMNELLNGRLAMMAVGGIA 118
Query: 354 HQ 359
Q
Sbjct: 119 TQ 120
[53][TOP]
>UniRef100_A3E4E2 Chlorophyll a-b binding protein n=1 Tax=Karlodinium micrum
RepID=A3E4E2_KARMI
Length = 249
Score = 68.6 bits (166), Expect = 3e-10
Identities = 48/151 (31%), Positives = 65/151 (43%), Gaps = 15/151 (9%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAF--------TLPASYFPNNVIAVDAHDYFVNTGGMQQL 158
E ELKH R+ MLA LG V E F +PA + ++A F+ + +
Sbjct: 100 EVELKHGRLAMLAALGMLVAEQFHPLFGGEIDVPAILAFRETLQLEARSKFIYIAVLFSI 159
Query: 159 LLWFCFAEFFSLLAVNYTMQGG------DREPGDFSFDPLNMASTPAKR-AQMELSEIKN 317
+ E FS+ N G D EPG+ FDPL + +M+ E+ N
Sbjct: 160 FI----PEVFSVFTFNSPAGGEPWSIREDHEPGNLGFDPLGLKPKDTSEFKEMQTKELNN 215
Query: 318 GRLAMIGIGGLIHQEFYSHKPIMDLLAHPAP 410
GRLAM+G G+I QE I D P P
Sbjct: 216 GRLAMLGAAGMIAQELVKTDKIFDNFVDPLP 246
[54][TOP]
>UniRef100_B7GAS4 Protein fucoxanthin chl a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7GAS4_PHATR
Length = 246
Score = 68.2 bits (165), Expect = 4e-10
Identities = 46/125 (36%), Positives = 66/125 (52%), Gaps = 6/125 (4%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQE-AFTLPASYFPNNVI--AVDAHDYFVNTGGMQQLLLWFC 173
EAE+KHCR+ MLA G+ + P + P I A +AH+ V+ G M +LL
Sbjct: 109 EAEIKHCRVAMLAVTGWIATDFGVRFPGAGAPYTDIPNAYNAHNILVDQGTMTVMLLAIG 168
Query: 174 FAEFFSLLAVNYTMQG--GDREPGDFSFDPLNMASTPAKRAQ-MELSEIKNGRLAMIGIG 344
F EF + A+ +G DR+ GDF FD + A+ + M+ E+ NGRLAM+ G
Sbjct: 169 FVEFCTGAALVQVSKGELTDRDAGDFGFDGGLLKGKSAEAIKTMKTKEVNNGRLAMLAFG 228
Query: 345 GLIHQ 359
G+ Q
Sbjct: 229 GIATQ 233
[55][TOP]
>UniRef100_B5Y4K0 Fucoxanthin chlorophyll a/c protein, lhcr type n=1
Tax=Phaeodactylum tricornutum CCAP 1055/1
RepID=B5Y4K0_PHATR
Length = 279
Score = 68.2 bits (165), Expect = 4e-10
Identities = 50/137 (36%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYF--VNTGGMQQL--LLW- 167
EAE+KH R+ MLA G+ + E F + + + A+DA D + GG+ ++ + W
Sbjct: 119 EAEIKHARLAMLAAAGWPLSELFDRQFASWLDLDPALDATDRVPSILNGGLGKISPVYWG 178
Query: 168 FCF--AEFFSLLAVNYTMQGGDREPGDFSFDPLNM-ASTPAKRAQMELSEIKNGRLAMIG 338
C A L + D PG FDPL + ST + +MEL+EIKNGRLAMI
Sbjct: 179 ACLGAAAAIDLYGLRKKRSDPDYFPGKLGFDPLGLYPSTTTGKRRMELAEIKNGRLAMIA 238
Query: 339 IGGLIHQEFYSHKPIMD 389
I G QEF ++D
Sbjct: 239 ITGFAFQEFVQQYAVVD 255
[56][TOP]
>UniRef100_B7FSI1 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7FSI1_PHATR
Length = 270
Score = 67.8 bits (164), Expect = 5e-10
Identities = 47/130 (36%), Positives = 70/130 (53%), Gaps = 9/130 (6%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDY---FVNTGGMQQLLLWFC 173
EAE+KH R+ MLA G+ + E + + + N VD D F+N G + +W+
Sbjct: 114 EAEIKHARLAMLAAAGYPLSELYDRQIAEYFNMQALVDGTDRAPSFLNGGLERVSPVWWG 173
Query: 174 FAEFFSLLAVNYTM---QGGDRE--PGDFSFDPLNMASTPAK-RAQMELSEIKNGRLAMI 335
F + Y + + GD PG+ FDP+ + + K R +MEL+EIK+GRLAM+
Sbjct: 174 FCLGMTAAIDLYGVAKARSGDPTYFPGNLGFDPVGLYPSDRKGRMRMELAEIKHGRLAML 233
Query: 336 GIGGLIHQEF 365
IGG I QE+
Sbjct: 234 AIGGFIVQEY 243
[57][TOP]
>UniRef100_Q7X8N6 Light-harvest protein n=1 Tax=Griffithsia japonica
RepID=Q7X8N6_GRIJA
Length = 217
Score = 67.0 bits (162), Expect = 8e-10
Identities = 47/130 (36%), Positives = 68/130 (52%), Gaps = 2/130 (1%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFAE 182
E+E+KH R+ MLA G QE LP + N +A +A + V + + Q+ L+ AE
Sbjct: 81 ESEIKHGRVCMLAVAGILAQEFVHLPDPRYANP-LATEALNQ-VPSAALWQIFLFCGLAE 138
Query: 183 FFSLLA-VNYTMQGGDRE-PGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLIH 356
F ++Y D PG+ F+P+N+ + M+L EIKNGRLAM +GG IH
Sbjct: 139 FVLHKGKISYVDMFSDGAVPGELGFNPMNLKISD----DMKLKEIKNGRLAMCAVGGFIH 194
Query: 357 QEFYSHKPIM 386
F PI+
Sbjct: 195 SMFIYKTPII 204
[58][TOP]
>UniRef100_Q2IA65 Chloroplast light harvesting protein isoform 14 n=1 Tax=Isochrysis
galbana RepID=Q2IA65_ISOGA
Length = 193
Score = 66.6 bits (161), Expect = 1e-09
Identities = 51/121 (42%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFF-VQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFA 179
EAELKH RI MLA +G+ V F +P F +V ++ AHD V +G M LL
Sbjct: 70 EAELKHGRICMLAWVGYVAVDNGFYVP---FAPHVSSLAAHDTAVKSGNMLLLLGAVGVI 126
Query: 180 EFFSLLAVNYTMQG-GDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLIH 356
E S AVN M G DR PGDFS DP A + +E EI + RLAM G++
Sbjct: 127 EALSYNAVNEMMSGQTDRRPGDFSMDPFGQAD----KTMLE-KEISHCRLAMFAFSGVVT 181
Query: 357 Q 359
Q
Sbjct: 182 Q 182
[59][TOP]
>UniRef100_P93450 Light-harvesting complex I polypeptide n=1 Tax=Porphyridium
purpureum RepID=P93450_PORCR
Length = 203
Score = 66.6 bits (161), Expect = 1e-09
Identities = 50/140 (35%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
Frame = +3
Query: 6 AELKHCRITMLACLGFFVQEAFTLPAS---YFPNNVIAVDAHDYFVNTGGMQQLLLWFCF 176
AELKH RI MLA LGF VQE S P+ +A+ Y V G Q++
Sbjct: 72 AELKHGRIAMLAALGFVVQEILAPKQSGPFTEPDPFLAI----YKVPVEGWYQIIAAISL 127
Query: 177 AEFFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLIH 356
E + NY G EPG+F FDPL + + + LSE+KNGRLAMI
Sbjct: 128 VELVTFKE-NYD---GSAEPGNFGFDPLGLGKDKSVFDKYALSELKNGRLAMIAWTAFAI 183
Query: 357 QEFYSHKPIMDLLAHPAPIL 416
Q+ + K ++ L P++
Sbjct: 184 QQIVTGKGVIKQLMEFQPLM 203
[60][TOP]
>UniRef100_B8BU33 Fucoxanthin chlorophyll a/c light-harvesting protein n=1
Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BU33_THAPS
Length = 252
Score = 66.2 bits (160), Expect = 1e-09
Identities = 46/125 (36%), Positives = 63/125 (50%), Gaps = 6/125 (4%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQE-AFTLPASYFPNNVI--AVDAHDYFVNTGGMQQLLLWFC 173
EAELKH RI M+A G+ + P + P + A AH+ V++G M +L
Sbjct: 106 EAELKHGRIAMMAFAGWLATDFGVRFPGAGEPYTSVPNAFSAHNIMVDSGAMWVMLSLIG 165
Query: 174 FAEFFSLLAVNYTMQG-GDREPGDFSFDPLNMASTPAKRA--QMELSEIKNGRLAMIGIG 344
F E + + +G DRE GDF FDPL + A M+L E++NGR AM+ G
Sbjct: 166 FIEISTAAVLVEVSKGENDREAGDFCFDPLGFCKGKSADAINTMKLKELQNGRAAMMAFG 225
Query: 345 GLIHQ 359
GL Q
Sbjct: 226 GLATQ 230
[61][TOP]
>UniRef100_Q2IA36 Chloroplast light harvesting protein isoform 6 n=1 Tax=Karlodinium
micrum RepID=Q2IA36_KARMI
Length = 246
Score = 65.1 bits (157), Expect = 3e-09
Identities = 50/138 (36%), Positives = 64/138 (46%), Gaps = 11/138 (7%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQ----LLLWF 170
E ELKH R+ MLA LGF V E F F N+ DA +Q ++
Sbjct: 113 EVELKHARLGMLAALGFLVGENFH---PLFGGNID--DAAYLAFQQTPLQTFWPAVVTAI 167
Query: 171 CFAEFFSLLAVNYTMQG------GDREPGDFSFDPLNMAST-PAKRAQMELSEIKNGRLA 329
E FS+ N G D PGD FDPLN+ T P + M+ E+ NGRLA
Sbjct: 168 AILEVFSVFTFNSPAGGEPWSIRSDHMPGDLGFDPLNLKPTDPEELKTMQTKELNNGRLA 227
Query: 330 MIGIGGLIHQEFYSHKPI 383
M+ G+I QEF + + I
Sbjct: 228 MLAAAGMIAQEFATGQKI 245
[62][TOP]
>UniRef100_B8CGG1 Fucoxanthin chlorophyll a/c protein, LI818 clade n=1
Tax=Thalassiosira pseudonana CCMP1335 RepID=B8CGG1_THAPS
Length = 255
Score = 64.7 bits (156), Expect = 4e-09
Identities = 48/137 (35%), Positives = 72/137 (52%), Gaps = 9/137 (6%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYF-PNN--VIAVDAHDYFVNTGG-----MQQL 158
EAE+ H R+ MLA LG+F EA P P N + V + + T G +++
Sbjct: 95 EAEVMHGRVAMLATLGYFAGEALPSPFGITGPANDQLQQVPLPAFLLLTAGIASAELKRA 154
Query: 159 LLWFCFAEFFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKR-AQMELSEIKNGRLAMI 335
+ + +F + + ++ + PGD FDPL + T AK A M+ E++NGRLAMI
Sbjct: 155 NIGWVEPDFGNWTKTLWKLRD-NYYPGDVGFDPLGLKPTDAKAFADMQTRELQNGRLAMI 213
Query: 336 GIGGLIHQEFYSHKPIM 386
G G+I QE +H+ IM
Sbjct: 214 GAIGMISQELVNHRTIM 230
[63][TOP]
>UniRef100_B5YM80 Fucoxanthin chlorophyll a/c light-harvesting protein n=1
Tax=Thalassiosira pseudonana CCMP1335 RepID=B5YM80_THAPS
Length = 252
Score = 64.7 bits (156), Expect = 4e-09
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 6/135 (4%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVN--TGGMQQLLLWFCF 176
EAE+KH R+ MLA G+ + E F + +D+ D + GG+ ++ +
Sbjct: 96 EAEVKHARLAMLAAAGWPLSEVFDKKIAAAFGATPILDSSDRVPSLLNGGLGKISPAYWI 155
Query: 177 AEFFSLLAV----NYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIG 344
A + A+ N +G D PGDF L S A + +M+L+EIKNGRLAMI +
Sbjct: 156 ACIGAAAAIDVLGNMKSKGADHLPGDFGLR-LGYPSDSAGQQRMQLAEIKNGRLAMIAVF 214
Query: 345 GLIHQEFYSHKPIMD 389
G QEF S + ++D
Sbjct: 215 GFAIQEFVSKQGVVD 229
[64][TOP]
>UniRef100_A7YXS8 Chloroplast light harvesting protein isoform 6 n=1 Tax=Karlodinium
micrum RepID=A7YXS8_KARMI
Length = 172
Score = 63.9 bits (154), Expect = 7e-09
Identities = 49/133 (36%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQ-----LLLW 167
E ELKH R+ MLA LGF V E F F N+ D Y Q ++
Sbjct: 39 EVELKHARLGMLAALGFLVGENFH---PLFGGNI---DDPAYLAFQQTPLQTFWPAVVTA 92
Query: 168 FCFAEFFSLLAVNYTMQG------GDREPGDFSFDPLNMAST-PAKRAQMELSEIKNGRL 326
E FS+ N G D PGD FDPLN+ T P + M+ E+ NGRL
Sbjct: 93 IAVLEVFSVFTFNSPAGGEPWSIRSDHMPGDLGFDPLNLKPTDPEELKTMQTKELNNGRL 152
Query: 327 AMIGIGGLIHQEF 365
AM+ G+I QEF
Sbjct: 153 AMLAAAGMIAQEF 165
[65][TOP]
>UniRef100_P93663 LI818r-1 protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii
RepID=P93663_CHLRE
Length = 196
Score = 63.2 bits (152), Expect = 1e-08
Identities = 49/144 (34%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFT-LPASYFPNNVIAVDAHDYF--VNTGGMQQLLLWFC 173
E+E+ H R+ MLA LGF V E P + + ++ A +F + G + LL+
Sbjct: 22 ESEITHGRVAMLAALGFVVGEQLQDFPLFFNWDGRVSGPAIYHFQQIGQGFWEPLLIAIG 81
Query: 174 FAEFFSLLAVNYTMQGG--------DREPGDFSFDPLNMAST-PAKRAQMELSEIKNGRL 326
AE + + AV + G D EPGD FDPL + T P + M+ E+ NGRL
Sbjct: 82 VAESYRV-AVGWATPTGTGFNSLKDDYEPGDLGFDPLGLKPTDPEELKVMQTKELNNGRL 140
Query: 327 AMIGIGGLIHQEFYSHKPIMDLLA 398
AMI I + QE I + LA
Sbjct: 141 AMIAIAAFVAQELVEQTEIFEHLA 164
[66][TOP]
>UniRef100_A8J431 Stress-related chlorophyll a/b binding protein 2 n=1
Tax=Chlamydomonas reinhardtii RepID=A8J431_CHLRE
Length = 259
Score = 63.2 bits (152), Expect = 1e-08
Identities = 49/144 (34%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFT-LPASYFPNNVIAVDAHDYF--VNTGGMQQLLLWFC 173
E+E+ H R+ MLA LGF V E P + + ++ A +F + G + LL+
Sbjct: 85 ESEITHGRVAMLAALGFVVGEQLQDFPLFFNWDGRVSGPAIYHFQQIGQGFWEPLLIAIG 144
Query: 174 FAEFFSLLAVNYTMQGG--------DREPGDFSFDPLNMAST-PAKRAQMELSEIKNGRL 326
AE + + AV + G D EPGD FDPL + T P + M+ E+ NGRL
Sbjct: 145 VAESYRV-AVGWATPTGTGFNSLKDDYEPGDLGFDPLGLKPTDPEELKVMQTKELNNGRL 203
Query: 327 AMIGIGGLIHQEFYSHKPIMDLLA 398
AMI I + QE I + LA
Sbjct: 204 AMIAIAAFVAQELVEQTEIFEHLA 227
[67][TOP]
>UniRef100_A2SY28 LI818-1 protein n=2 Tax=Mesostigma viride RepID=A2SY28_MESVI
Length = 226
Score = 63.2 bits (152), Expect = 1e-08
Identities = 52/150 (34%), Positives = 71/150 (47%), Gaps = 23/150 (15%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFT-----------------LPASYFPNNVIAVD-AHDY 128
E+EL H R+ MLA LGF V E F +P ++ V+A+ A +
Sbjct: 88 ESELVHGRVAMLATLGFVVGETFNPLFGGSITGPAINQFQQVPQPFWELVVLAIGLAEGF 147
Query: 129 FVNTGGMQQLLLWFCFAE-FFSLLAV---NYTMQGGDREPGDFSFDPLNMASTPAKRA-Q 293
+N G W AE FFS+ V +YT PG +DPL + T +K +
Sbjct: 148 RINRG-------WGSPAEAFFSIPGVLKESYT-------PGTLGYDPLGLKPTNSKELDE 193
Query: 294 MELSEIKNGRLAMIGIGGLIHQEFYSHKPI 383
M E+ NGRLAMIGI G++ QE + PI
Sbjct: 194 MATKELNNGRLAMIGIAGMVVQELITQTPI 223
[68][TOP]
>UniRef100_A9U5E4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9U5E4_PHYPA
Length = 278
Score = 62.8 bits (151), Expect = 2e-08
Identities = 55/152 (36%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFT-LPASYFPNNVIAVDAHDYFVNTGGMQQL-LLWFCF 176
+AEL HCR ML G F+ EA T + P+ +A DA DYF + + + L+ F +
Sbjct: 110 QAELVHCRWAMLGAAGIFIPEALTKMGILNTPSWTVAGDA-DYFTDKTTLFVIELILFAW 168
Query: 177 AEFFSLLAV-------------NYTMQGGD-REPGDFSFDPLNMASTP--AKRAQMELSE 308
AE + N + G D PG FDPL T AK + E
Sbjct: 169 AEGRRWADIVNPGCVNVDPVFPNNKLTGTDVGYPGGLWFDPLGWGQTSDAAKLKDLRTRE 228
Query: 309 IKNGRLAMIGIGGLIHQEFYSHK-PIMDLLAH 401
IKNGRLAM+ + G I Q Y+H PI +L+AH
Sbjct: 229 IKNGRLAMLAVLGAIVQANYTHTGPIDNLVAH 260
[69][TOP]
>UniRef100_Q2IA40 Chloroplast light harvesting protein isoform 2 n=1 Tax=Karlodinium
micrum RepID=Q2IA40_KARMI
Length = 236
Score = 62.4 bits (150), Expect = 2e-08
Identities = 50/136 (36%), Positives = 62/136 (45%), Gaps = 16/136 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLL---W-- 167
E ELKH R+ MLA LGF V E ++ P +DA Y QQ L W
Sbjct: 102 EVELKHGRLGMLAALGFLVGE------NFHPLFGGDIDAPAYL----AFQQTPLETFWGI 151
Query: 168 ----FCFAEFFSLLAVNYTMQG------GDREPGDFSFDPLNMAST-PAKRAQMELSEIK 314
E FS+ A N G D PGD FDPLN+ T P + M+ E+
Sbjct: 152 VVAAIASLELFSVFAFNNPAGGEPWSIRSDHVPGDLGFDPLNLKPTDPEELKTMQTKELN 211
Query: 315 NGRLAMIGIGGLIHQE 362
NGRLAM+ G++ QE
Sbjct: 212 NGRLAMLAAAGMVAQE 227
[70][TOP]
>UniRef100_Q2IA38 Chloroplast light harvesting protein isoform 4 n=1 Tax=Karlodinium
micrum RepID=Q2IA38_KARMI
Length = 238
Score = 62.4 bits (150), Expect = 2e-08
Identities = 50/136 (36%), Positives = 62/136 (45%), Gaps = 16/136 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLL---W-- 167
E ELKH R+ MLA LGF V E ++ P +DA Y QQ L W
Sbjct: 104 EVELKHGRLGMLAALGFLVGE------NFHPLFGGDIDAPAYL----AFQQTPLETFWGI 153
Query: 168 ----FCFAEFFSLLAVNYTMQG------GDREPGDFSFDPLNMAST-PAKRAQMELSEIK 314
E FS+ A N G D PGD FDPLN+ T P + M+ E+
Sbjct: 154 VVAGIASLELFSVFAFNNPAGGEPWSIKSDHVPGDLGFDPLNLKPTDPEELKTMQTKELN 213
Query: 315 NGRLAMIGIGGLIHQE 362
NGRLAM+ G++ QE
Sbjct: 214 NGRLAMLAAAGMVAQE 229
[71][TOP]
>UniRef100_Q2IA37 Chloroplast light harvesting protein isoform 5 (Fragment) n=1
Tax=Karlodinium micrum RepID=Q2IA37_KARMI
Length = 223
Score = 62.4 bits (150), Expect = 2e-08
Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQ-----LLLW 167
E ELKH R+ MLA LGF + E ++ P +DA Y Q ++
Sbjct: 95 EVELKHGRLGMLAALGFLIGE------NFHPLFGGDIDAPGYLAFQQTPLQTFWPAVVTA 148
Query: 168 FCFAEFFSLLAVNYTMQG------GDREPGDFSFDPLNMASTPAKRAQ-MELSEIKNGRL 326
E FS+ + N G D PGD FDPLN+ T A+ + M+ E+ NGRL
Sbjct: 149 IAILEVFSVFSFNSPAGGEPWSIRSDHVPGDLGFDPLNLKPTDAEELKTMQTKELNNGRL 208
Query: 327 AMIGIGGLIHQE 362
AM+ G+I QE
Sbjct: 209 AMLAAAGMIAQE 220
[72][TOP]
>UniRef100_A4QPP5 Chloroplast light-harvesting complex protein Lhcz1 (Fragment) n=1
Tax=Pavlova lutheri RepID=A4QPP5_PAVLU
Length = 191
Score = 62.4 bits (150), Expect = 2e-08
Identities = 51/134 (38%), Positives = 69/134 (51%), Gaps = 13/134 (9%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYF---PNNVIAVDAHDYFVNTGGMQQLLLWFC 173
EAEL+H R+ MLA L + VQE F S PN + + V GG+ + +
Sbjct: 58 EAELRHGRLAMLAALAWPVQELFNPVLSRVLREPNYLAQIGGKSPSVLNGGLGLGPVPYT 117
Query: 174 FAEFFSLLAV--NYTMQ-----GGDREPGDFSFDPLNM---ASTPAKRAQMELSEIKNGR 323
A F L+A Y++Q G + PGDF FDPL + AS AKR M+ E+ NGR
Sbjct: 118 IAAFALLIAAVDIYSIQLKKEVGENWLPGDFGFDPLKVLGGASLEAKR-DMQEKELNNGR 176
Query: 324 LAMIGIGGLIHQEF 365
LAM+ I + +EF
Sbjct: 177 LAMVAITTYVIEEF 190
[73][TOP]
>UniRef100_Q5ENN0 Chloroplast light harvesting complex protein n=1 Tax=Heterocapsa
triquetra RepID=Q5ENN0_HETTR
Length = 478
Score = 62.0 bits (149), Expect = 3e-08
Identities = 46/118 (38%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPA-SYFPNNVIAVDA-HDYFVNTGGMQQLLLWFCF 176
E+E+KH R+ MLA +G VQ +P P+ + A+ A + V T G+ Q+ ++F
Sbjct: 152 ESEIKHGRVCMLAFVGIVVQSIVQIPGYPQEPDWLNALSACYASKVPTLGLVQMSVFFML 211
Query: 177 AEFFSLLAVNYTMQGGDREPGDFSFDPLNMASTPA---KRAQMELSEIKNGRLAMIGI 341
E N + DREPGD FDPL + P K+AQ L E+KNGRLAMI +
Sbjct: 212 VEG-RYFPENAWIGQMDREPGDLGFDPLKLTKKPGFDLKKAQ--LQELKNGRLAMIAV 266
[74][TOP]
>UniRef100_P93664 LI818r-1 protein n=1 Tax=Chlamydomonas reinhardtii
RepID=P93664_CHLRE
Length = 253
Score = 61.2 bits (147), Expect = 4e-08
Identities = 47/143 (32%), Positives = 68/143 (47%), Gaps = 12/143 (8%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFT-LPASYFPNNVIAVDAHDYF--VNTGGMQQLLLWFC 173
E+E+ H R+ MLA LGF V E P + + ++ A +F + G + LL+
Sbjct: 79 ESEITHGRVAMLAALGFIVGEQLQDFPLFFNFDGRVSGPAIYHFQQIGQGFWEPLLIAIG 138
Query: 174 FAEFFSLLAVNYTMQGG--------DREPGDFSFDPLNMAST-PAKRAQMELSEIKNGRL 326
AE + + AV + G D EPGD FDPL + T P + ++ E+ NGRL
Sbjct: 139 VAESYRV-AVGWATPTGTGFNSLKDDYEPGDLGFDPLGLKPTDPEELKTLQTKELNNGRL 197
Query: 327 AMIGIGGLIHQEFYSHKPIMDLL 395
AMI I + QE I + L
Sbjct: 198 AMIAIAAFVAQELVEQTEIFEHL 220
[75][TOP]
>UniRef100_O81933 Fucoxanthin chlorophyll a/c binding protein n=1 Tax=Cyclotella
cryptica RepID=O81933_9STRA
Length = 231
Score = 61.2 bits (147), Expect = 4e-08
Identities = 48/147 (32%), Positives = 65/147 (44%), Gaps = 20/147 (13%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQL-----LLW 167
EAE +H R+ MLA +G V E P Y P + D D + ++ L +
Sbjct: 70 EAETQHGRVAMLAAVGMLVTEE---PIEYHP--LFEADNKDIGPAIRHLDEVRAVEPLFF 124
Query: 168 FCFAEFFSLLAVNYTMQG--------------GDREPGDFSFDPLNMA-STPAKRAQMEL 302
FA F L N ++G D PGD FDPL + A A M+
Sbjct: 125 LAFAAFIGALEWNRALKGFSKPEGEFEFQQIEADYYPGDVGFDPLGLKPKDSADFAVMQT 184
Query: 303 SEIKNGRLAMIGIGGLIHQEFYSHKPI 383
E++NGRLAM+G G+I QE + K I
Sbjct: 185 KELQNGRLAMLGAAGMIAQELQNGKEI 211
[76][TOP]
>UniRef100_A7YXS6 Chloroplast light harvesting protein isoform 4 n=1 Tax=Karlodinium
micrum RepID=A7YXS6_KARMI
Length = 240
Score = 60.8 bits (146), Expect = 6e-08
Identities = 49/136 (36%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLL---W-- 167
E ELKH R+ MLA LGF V E ++ P +DA Y QQ L W
Sbjct: 106 EVELKHGRLGMLAALGFLVGE------NFHPLFGGDIDAPAYL----AFQQTPLETFWGI 155
Query: 168 ----FCFAEFFSLLAVNYTMQG------GDREPGDFSFDPLNMAST-PAKRAQMELSEIK 314
E FS+ N G D PGD FDPLN+ T P + M+ E+
Sbjct: 156 VVAAIASLELFSVFTFNNPAGGEPWSIRSDHVPGDLGFDPLNLKPTDPEELKTMQTKELN 215
Query: 315 NGRLAMIGIGGLIHQE 362
NGRLAM+ G++ QE
Sbjct: 216 NGRLAMLAAAGMVAQE 231
[77][TOP]
>UniRef100_A7YXS5 Chloroplast light harvesting protein isoform 4 n=1 Tax=Karlodinium
micrum RepID=A7YXS5_KARMI
Length = 240
Score = 60.8 bits (146), Expect = 6e-08
Identities = 49/136 (36%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLL---W-- 167
E ELKH R+ MLA LGF V E ++ P +DA Y QQ L W
Sbjct: 106 EVELKHGRLGMLAALGFLVGE------NFHPLFGGDIDAPAYL----AFQQTPLETFWGI 155
Query: 168 ----FCFAEFFSLLAVNYTMQG------GDREPGDFSFDPLNMAST-PAKRAQMELSEIK 314
E FS+ N G D PGD FDPLN+ T P + M+ E+
Sbjct: 156 VVAAIASLELFSVFTFNNPAGGEPWSIRSDHVPGDLGFDPLNLKPTDPEELKTMQTKELN 215
Query: 315 NGRLAMIGIGGLIHQE 362
NGRLAM+ G++ QE
Sbjct: 216 NGRLAMLAAAGMVAQE 231
[78][TOP]
>UniRef100_A3E3Y3 Chloroplast light harvesting protein isoform 4 n=1 Tax=Karlodinium
micrum RepID=A3E3Y3_KARMI
Length = 240
Score = 60.8 bits (146), Expect = 6e-08
Identities = 49/136 (36%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLL---W-- 167
E ELKH R+ MLA LGF V E ++ P +DA Y QQ L W
Sbjct: 106 EVELKHGRLGMLAALGFLVGE------NFHPLFGGDIDAPAYL----AFQQTPLETFWGI 155
Query: 168 ----FCFAEFFSLLAVNYTMQG------GDREPGDFSFDPLNMAST-PAKRAQMELSEIK 314
E FS+ N G D PGD FDPLN+ T P + M+ E+
Sbjct: 156 VVAAIASLELFSVFTFNNPAGGEPWSIRSDHVPGDLGFDPLNLKPTDPEELKTMQTKELN 215
Query: 315 NGRLAMIGIGGLIHQE 362
NGRLAM+ G++ QE
Sbjct: 216 NGRLAMLAAAGMVAQE 231
[79][TOP]
>UniRef100_C1N5Z4 Chlorophyll a/b-binding protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N5Z4_9CHLO
Length = 253
Score = 60.5 bits (145), Expect = 8e-08
Identities = 48/135 (35%), Positives = 66/135 (48%), Gaps = 15/135 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFAE 182
+ E+ H RI MLA LGF V E + F +NV A ++F G+ LL A
Sbjct: 68 DVEITHARICMLASLGFLVGEQVEGSSFLFDSNVTG-PAINHFQQVPGLFWGLLG---AA 123
Query: 183 FFSLLA--VNYTMQG-----------GDREPGDFSFDPLNMAS--TPAKRAQMELSEIKN 317
F++ A V Y Q D PGD++FDPL ++ A M+L EI N
Sbjct: 124 IFTVEASRVQYAWQNPFDAEKLFLLKDDYTPGDYNFDPLKLSKGKDEAWLNDMKLKEINN 183
Query: 318 GRLAMIGIGGLIHQE 362
GR+AM+ I G++ QE
Sbjct: 184 GRVAMVAISGMVAQE 198
[80][TOP]
>UniRef100_B8BYV3 Member of fucoxanthin chlorophyll a/c family, lhca clade n=1
Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BYV3_THAPS
Length = 219
Score = 59.7 bits (143), Expect = 1e-07
Identities = 45/133 (33%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAF-TLPASYFPNNVIAVDA-------HDYFVNTGGMQQL 158
EAE+KH R+ MLA G E F P DA H ++
Sbjct: 76 EAEIKHARVAMLAVAGALQVEVFGPAPGCEMATAKCQTDAFWQIWSAHPQYIAAS----- 130
Query: 159 LLWFCFAEFFSLLAVNYTMQGGDREPGDFSFDPLNMAS-TPAKRAQMELSEIKNGRLAMI 335
L+ E S +A + GDR PGDF DPL + AK +++L EI+NGRLAM
Sbjct: 131 LVLITIVEAVSGIAATTGRESGDRAPGDFGLDPLGFCNGDVAKADRLKLQEIENGRLAMW 190
Query: 336 GIGGLIHQEFYSH 374
GL+ Q +H
Sbjct: 191 AAMGLLVQGSTNH 203
[81][TOP]
>UniRef100_B8BX75 Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8BX75_THAPS
Length = 207
Score = 59.7 bits (143), Expect = 1e-07
Identities = 46/125 (36%), Positives = 65/125 (52%), Gaps = 13/125 (10%)
Frame = +3
Query: 6 AELKHCRITMLACLGFFVQEAFTLPASYFPNNVIA------------VDAHDYFVNTGGM 149
AELKH R+ MLA G+ VQ A +FP + + +DA D V G
Sbjct: 68 AELKHSRVAMLATTGYIVQAA----GIHFPGMLSSDVSFESLSAMKPLDAWD-AVPDLGK 122
Query: 150 QQLLLWFCFAEFFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELS-EIKNGRL 326
Q+ FAEF S + + M+GGD F P+N AS+ A++ ++++S E+ NGRL
Sbjct: 123 AQIYFTIFFAEFVSEFSGTHYMKGGDFP--TIVFPPINFASSDAEKEKLQMSRELNNGRL 180
Query: 327 AMIGI 341
AMI I
Sbjct: 181 AMISI 185
[82][TOP]
>UniRef100_A9TJ06 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9TJ06_PHYPA
Length = 273
Score = 59.3 bits (142), Expect = 2e-07
Identities = 50/153 (32%), Positives = 67/153 (43%), Gaps = 18/153 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQL-LLWFCFA 179
+AEL HCR ML G F+ EA T + YF + + + ++ F +A
Sbjct: 105 QAELVHCRWAMLGAAGIFIPEALTKAGILNTPSWTVAGDQQYFTDATTLFVIEIILFAWA 164
Query: 180 EFFSLLAV-------------NYTMQGGD-REPGDFSFDPLNMAST--PAKRAQMELSEI 311
E + N + G D PG FDPL T AK + EI
Sbjct: 165 EGRRWADIINPGCVNVDPVFPNNKLTGTDVGYPGGLWFDPLGWGQTGDAAKLKDLRTREI 224
Query: 312 KNGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPA 407
KNGRLAM+ + G + Q Y+H PI +LLAH A
Sbjct: 225 KNGRLAMLAVLGAVVQANYTHTGPIDNLLAHLA 257
[83][TOP]
>UniRef100_Q5ENM9 Chloroplast light harvesting complex protein (Fragment) n=1
Tax=Heterocapsa triquetra RepID=Q5ENM9_HETTR
Length = 252
Score = 58.9 bits (141), Expect = 2e-07
Identities = 42/123 (34%), Positives = 58/123 (47%), Gaps = 4/123 (3%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVI--AVDAHDYFVNTGGMQ-QLLLWFC 173
EAELKH RI MLA +G V + +P + I +DAHD G+ Q+L W
Sbjct: 134 EAELKHGRIAMLAWVGLVVPDFVRIPGERYSFEAIPNVLDAHDKLNGAVGVNFQILFWIA 193
Query: 174 FAEFFSLLAVNYTMQGGDREP-GDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGL 350
E L + E GD+ A ++ +M L+E+KNGRLAM+ GG
Sbjct: 194 LVE---LCCAKKVFEWNSLETAGDYGLTGFFPADEEGQK-RMRLAELKNGRLAMVAFGGA 249
Query: 351 IHQ 359
+ Q
Sbjct: 250 VTQ 252
[84][TOP]
>UniRef100_Q5K288 Light harvesting complex protein (Fragment) n=1 Tax=Guillardia
theta RepID=Q5K288_GUITH
Length = 258
Score = 58.2 bits (139), Expect = 4e-07
Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 9/137 (6%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFT--LPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCF 176
EAELKH R+ MLA G+ V E L +++A + GG+ ++ F
Sbjct: 112 EAELKHGRLAMLAAAGWPVSELVQPYLAKMLGQPDLLAAGEKAPSLLNGGLDRVNPVFFM 171
Query: 177 AEFF---SLLAVNYTM-QGGDREPGDFSFDPLNM---ASTPAKRAQMELSEIKNGRLAMI 335
A ++ +V +T +G D PGD FDPL + S P KR +EL E+ NGRLAM+
Sbjct: 172 AIIIFTATVESVAFTRTRGADYIPGDLGFDPLRLYTGKSEPVKR-DLELKELNNGRLAML 230
Query: 336 GIGGLIHQEFYSHKPIM 386
I ++EF + ++
Sbjct: 231 AITAYAYEEFLTKASVI 247
[85][TOP]
>UniRef100_C1EI81 Chlorophyll a/b-binding protein n=1 Tax=Micromonas sp. RCC299
RepID=C1EI81_9CHLO
Length = 254
Score = 57.8 bits (138), Expect = 5e-07
Identities = 47/135 (34%), Positives = 65/135 (48%), Gaps = 15/135 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFAE 182
+ E+ H RI+MLA LGF V E + F + V A ++F G+ LL A
Sbjct: 68 DVEITHGRISMLAALGFLVGEQVEGSSFLFDSQVTG-PAINHFQQVPGLFWGLLG---AT 123
Query: 183 FFSLLA--VNYTMQGG-----------DREPGDFSFDPLNMAS--TPAKRAQMELSEIKN 317
F++ A V Y Q D PGD+ FDPL ++ A M+L EI N
Sbjct: 124 IFTIEASRVQYAWQNPFDADKLFLLKTDYTPGDYQFDPLKLSKGKDAAWLNDMKLKEINN 183
Query: 318 GRLAMIGIGGLIHQE 362
GR+AM+ I G++ QE
Sbjct: 184 GRVAMVAISGMVAQE 198
[86][TOP]
>UniRef100_P04779 Chlorophyll a-b binding protein 13, chloroplastic n=1 Tax=Petunia
sp. RepID=CB21_PETSP
Length = 266
Score = 57.0 bits (136), Expect = 8e-07
Identities = 50/159 (31%), Positives = 65/159 (40%), Gaps = 20/159 (12%)
Frame = +3
Query: 9 ELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQL---------- 158
E+ HCR TML LG E F F + A GG+ L
Sbjct: 99 EVIHCRWTMLGALGCVFPELFARNGVKF-GEAVWFKAGSQIFKEGGLDYLGNPSLVHAQS 157
Query: 159 --LLWFCFAEFFSLLAVNYTMQGGDRE-------PGDFSFDPLNMASTPAKRAQMELSEI 311
+W C + Y + GG PG SFDPL +A P A++E+ EI
Sbjct: 158 ILAIWACQVVLMGAVE-GYRVAGGPLGEVIDPLYPGG-SFDPLGLADDPEAFAELEVKEI 215
Query: 312 KNGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPAPILNVN 425
KNGRLAM + G Q + K P+ +L H A +N N
Sbjct: 216 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
[87][TOP]
>UniRef100_B8BU32 Fucoxanthin chlorophyll a/c protein n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8BU32_THAPS
Length = 254
Score = 56.2 bits (134), Expect = 1e-06
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 9/128 (7%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEA------FTLPASYFPNNVIAVDAHDYFVNTGGMQQLLL 164
EAELKH R+ MLA G+ + P + + ++ AHD V+ G + +L+
Sbjct: 105 EAELKHGRVAMLAWTGWLATDGALGPVPLRFPGAAYQAVPNSLSAHDIMVDQGSLGFMLV 164
Query: 165 WFCFAEF-FSLLAVNYTMQGGDREPGDFSFDPLNM--ASTPAKRAQMELSEIKNGRLAMI 335
E + + V + DR GDF DPL + A M+L E++NGR AM+
Sbjct: 165 AIGIIEVCCATVLVEVSKGESDRAAGDFKLDPLQFLKGKSDADINTMKLKELQNGRAAMM 224
Query: 336 GIGGLIHQ 359
G++ Q
Sbjct: 225 AFAGVVTQ 232
[88][TOP]
>UniRef100_B9GZP7 Light-harvesting complex I protein Lhca2 n=1 Tax=Populus
trichocarpa RepID=B9GZP7_POPTR
Length = 269
Score = 55.8 bits (133), Expect = 2e-06
Identities = 49/152 (32%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFC--- 173
+AEL HCR ML G F+ E T + + +YF +T + + L+F
Sbjct: 104 QAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYSAGEVEYFTDTTTLFIVELFFIGWA 163
Query: 174 ----FAEFFSLLAVNYT-------MQGGD-REPGDFSFDPLNMAS-TPAKRAQMELSEIK 314
+A+ VN + G D PG FDPL S +P K ++ EIK
Sbjct: 164 EGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIK 223
Query: 315 NGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPA 407
NGRLAM+ + G Q Y+ PI +L AH A
Sbjct: 224 NGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLA 255
[89][TOP]
>UniRef100_B8BYV4 Fucoxanthin chl a/c light-harvesting protein n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8BYV4_THAPS
Length = 214
Score = 55.8 bits (133), Expect = 2e-06
Identities = 44/132 (33%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFT----LPASYFPNNVIAV----DAHDYFVNTGGMQQL 158
EAE+KH R+ MLA G EAF A+ N + A ++H ++
Sbjct: 77 EAEIKHARVAMLAVAGAVWVEAFGPAPGCEAATAKNQMDAFWQIWNSHPQYIAAS----- 131
Query: 159 LLWFCFAEFFSLLAVNYTMQGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIG 338
L++ AE S ++ + G+REPG F F N T A +M+ E++NGRLAM
Sbjct: 132 LVFIMIAEAVSGISTTTGRESGEREPGFFGFGS-NFPKTDADMKKMQDKELENGRLAMWA 190
Query: 339 IGGLIHQEFYSH 374
GLI Q +H
Sbjct: 191 AMGLIFQGSANH 202
[90][TOP]
>UniRef100_B7G6N5 Protein fucoxanthin chlorophyll a/c protein (Fragment) n=1
Tax=Phaeodactylum tricornutum CCAP 1055/1
RepID=B7G6N5_PHATR
Length = 246
Score = 55.8 bits (133), Expect = 2e-06
Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDY---FVNTG-GMQQLLLWF 170
EAE+KH R+ MLA G+ E F P + + +DA + +N G G + W
Sbjct: 98 EAEVKHGRLAMLASAGWIFAERFDRPLAQLFSMEPVLDASNRNPALLNGGLGKVSPVYWV 157
Query: 171 -CF--AEFFSLLAVNYTMQGGDREPGDFSFDPLNM-ASTPAKRAQMELSEIKNGRLAMIG 338
C A L + + + PG+ +DPL + S P+ + +M L+EIK+GRLAMI
Sbjct: 158 SCLVAAAAIDLNGIEKSRNDPNYFPGNLGWDPLGLYPSDPSGQRRMLLAEIKHGRLAMIA 217
Query: 339 IGGLIHQEFYSHKPIMD 389
I QEF +++
Sbjct: 218 ITAFAFQEFVQQYAVIN 234
[91][TOP]
>UniRef100_A9PGU8 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=A9PGU8_POPTR
Length = 269
Score = 55.8 bits (133), Expect = 2e-06
Identities = 49/152 (32%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFC--- 173
+AEL HCR ML G F+ E T + + +YF +T + + L+F
Sbjct: 104 QAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYSAGEVEYFTDTTTLFIVELFFIGWA 163
Query: 174 ----FAEFFSLLAVNYT-------MQGGD-REPGDFSFDPLNMAS-TPAKRAQMELSEIK 314
+A+ VN + G D PG FDPL S +P K ++ EIK
Sbjct: 164 EGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIK 223
Query: 315 NGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPA 407
NGRLAM+ + G Q Y+ PI +L AH A
Sbjct: 224 NGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLA 255
[92][TOP]
>UniRef100_C6TKB2 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TKB2_SOYBN
Length = 270
Score = 55.5 bits (132), Expect = 2e-06
Identities = 49/152 (32%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFC--- 173
+AEL HCR ML G F+ E T + +YF +T + + L+F
Sbjct: 105 QAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELFFIGWA 164
Query: 174 ----FAEFFSLLAVNYT-------MQGGD-REPGDFSFDPLNMAS-TPAKRAQMELSEIK 314
+A+ VN + G D PG FDPL S +P K ++ EIK
Sbjct: 165 EGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIK 224
Query: 315 NGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPA 407
NGRLAM+ + G Q Y+ PI +L AH A
Sbjct: 225 NGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLA 256
[93][TOP]
>UniRef100_C1E3Q9 Chlorophyll a/b-binding protein-like protein, chloroplast n=1
Tax=Micromonas sp. RCC299 RepID=C1E3Q9_9CHLO
Length = 284
Score = 55.5 bits (132), Expect = 2e-06
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFAE 182
+ E+ H R+ MLA +G V E + F + V A ++F G L W
Sbjct: 79 DVEITHGRVAMLAAIGVLVGEQVEGSSFLFDSQVTG-PAINHFQQVPG----LFWGLLGA 133
Query: 183 FFSLLAVNYTMQG--------------GDREPGDFSFDPLNMAS--TPAKRAQMELSEIK 314
F ++ + Q D PGD+ FDPL++ + + A+ ++ E+
Sbjct: 134 FIFVVEASRVQQAWQDPFVADRLFLLKSDHVPGDYGFDPLSLGDGISDEELARHKMGELN 193
Query: 315 NGRLAMIGIGGLIHQE 362
NGRLAMI I G++ QE
Sbjct: 194 NGRLAMIAISGMVGQE 209
[94][TOP]
>UniRef100_B9GML1 Light-harvesting complex I protein Lhca2 n=1 Tax=Populus
trichocarpa RepID=B9GML1_POPTR
Length = 272
Score = 55.5 bits (132), Expect = 2e-06
Identities = 49/152 (32%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFC--- 173
+AEL HCR ML G F+ E T + +YF +T + + L+F
Sbjct: 107 QAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELFFIGWA 166
Query: 174 ----FAEFFSLLAVNYT-------MQGGD-REPGDFSFDPLNMAS-TPAKRAQMELSEIK 314
+A+ VN + G D PG FDPL S +P K ++ EIK
Sbjct: 167 EGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIK 226
Query: 315 NGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPA 407
NGRLAM+ + G Q Y+ PI +L AH A
Sbjct: 227 NGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLA 258
[95][TOP]
>UniRef100_B7G4U8 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G4U8_PHATR
Length = 260
Score = 55.5 bits (132), Expect = 2e-06
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVN--TGGMQQLLLWFCF 176
EAE+KH R+ MLA G+ + E F + + +DA+D + GG+ ++ +
Sbjct: 99 EAEVKHARLAMLAAAGWPLSELFDAKIANWMGMTPLLDANDRAPSLLNGGLGKVSPVYWV 158
Query: 177 AEFFSLLAVNY------TMQGGDREPGDFSFDPLNM-ASTPAKRAQMELSEIKNGRLAMI 335
A + A++ D PG+ DP + A + M+L E+KNGRLAMI
Sbjct: 159 ACLVAAAAIDVYGISKARKNEPDYFPGNLGIDPFGLFPKDAAAQEDMKLKELKNGRLAMI 218
Query: 336 GIGGLIHQEFYS 371
I QEF S
Sbjct: 219 AISAFAFQEFVS 230
[96][TOP]
>UniRef100_A9PGU3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=A9PGU3_POPTR
Length = 269
Score = 55.5 bits (132), Expect = 2e-06
Identities = 49/152 (32%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFC--- 173
+AEL HCR ML G F+ E T + +YF +T + + L+F
Sbjct: 104 QAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELFFIGWA 163
Query: 174 ----FAEFFSLLAVNYT-------MQGGD-REPGDFSFDPLNMAS-TPAKRAQMELSEIK 314
+A+ VN + G D PG FDPL S +P K ++ EIK
Sbjct: 164 EGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIK 223
Query: 315 NGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPA 407
NGRLAM+ + G Q Y+ PI +L AH A
Sbjct: 224 NGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLA 255
[97][TOP]
>UniRef100_A4QPN4 Chloroplast light-harvesting complex protein LI818;2 n=1
Tax=Micromonas sp. CCMP490 RepID=A4QPN4_9CHLO
Length = 249
Score = 55.5 bits (132), Expect = 2e-06
Identities = 45/143 (31%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFAE 182
+ E+ H RI MLA LGF V E A F N+ A D+F G
Sbjct: 64 DVEITHGRIAMLASLGFLVGEQVEGSAFLFDANITG-PAIDHFQQVPGT----------- 111
Query: 183 FFSLL-AVNYTMQGG--------------------DREPGDFSFDPLNMAS--TPAKRAQ 293
F+ LL AV +T++ D PGD++FDPL +++
Sbjct: 112 FWGLLGAVIFTIEANRVQTAWQNPFEADKLFLLKDDYTPGDYNFDPLKLSAGKDDVWLND 171
Query: 294 MELSEIKNGRLAMIGIGGLIHQE 362
M+L E+ NGR+AM+ I G++ QE
Sbjct: 172 MKLKEVNNGRVAMVAISGMVAQE 194
[98][TOP]
>UniRef100_Q9XF88 Chlorophyll a-b binding protein CP29.2, chloroplastic n=1
Tax=Arabidopsis thaliana RepID=CB4B_ARATH
Length = 287
Score = 55.5 bits (132), Expect = 2e-06
Identities = 51/159 (32%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQ-QLLLWFCFA 179
E EL H R MLA LG E T V VD Y L+W
Sbjct: 135 ECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWI--- 191
Query: 180 EFFSLLAVNYTMQGGDRE--------PGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMI 335
+L + Y + E PG FDPL +AS P K+AQ++L+EIK+ RLAM+
Sbjct: 192 ---EVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMV 248
Query: 336 GIGGLIHQEFYSHK-PIMDLLAHPAPILNVNM*FFFLSS 449
G G Q + K P+ + H + L+ + F SS
Sbjct: 249 GFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 287
[99][TOP]
>UniRef100_P04782 Chlorophyll a-b binding protein 25, chloroplastic n=1 Tax=Petunia
sp. RepID=CB24_PETSP
Length = 266
Score = 55.5 bits (132), Expect = 2e-06
Identities = 49/160 (30%), Positives = 66/160 (41%), Gaps = 19/160 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFP--------NNVIAVDAHDYFVNTG---GM 149
E E+ HCR ML LG E F F + + + DY N
Sbjct: 97 ELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ 156
Query: 150 QQLLLWFCFAEFFSLLAVNYTMQGGDRE-------PGDFSFDPLNMASTPAKRAQMELSE 308
L +W C + Y + GG PG SFDPL +A P A++++ E
Sbjct: 157 SILAIWACQVVLMGAVE-GYRVAGGPLGEVIDPLYPGG-SFDPLGLADDPEAFAELKVKE 214
Query: 309 IKNGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPAPILNVN 425
IKNGRLAM + G Q + K P+ +L H A +N N
Sbjct: 215 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
[100][TOP]
>UniRef100_P04784 Chlorophyll a-b binding protein, chloroplastic n=1 Tax=Triticum
aestivum RepID=CB21_WHEAT
Length = 266
Score = 55.5 bits (132), Expect = 2e-06
Identities = 50/160 (31%), Positives = 67/160 (41%), Gaps = 19/160 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTL------PASYFP--NNVIAVDAHDYFVNTG---GM 149
E E+ HCR ML LG E A +F + + + DY N
Sbjct: 97 ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQ 156
Query: 150 QQLLLWFCFAEFFSLLAVNYTMQGGDRE-------PGDFSFDPLNMASTPAKRAQMELSE 308
L +W C + Y + GG PG SFDPL +A P A++++ E
Sbjct: 157 SLLAIWACQVVLMGAVE-GYRIAGGPLGEIVDPLYPGG-SFDPLGLAERPQAFAELKVKE 214
Query: 309 IKNGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPAPILNVN 425
IKNGRLAM + G Q + K P+ DL H A +N N
Sbjct: 215 IKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNN 254
[101][TOP]
>UniRef100_A8HPF9 Chloroplast light-harvesting complex II protein (Fragment) n=1
Tax=Euglena gracilis RepID=A8HPF9_EUGGR
Length = 613
Score = 55.1 bits (131), Expect = 3e-06
Identities = 50/159 (31%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPN--------NVIAVDAHDYFVNTGGM--Q 152
EAEL H R ML LG EA + + DY N+ + Q
Sbjct: 187 EAELIHARWAMLGALGVVFPEALAKAGVPLAEPVWFKAGAQIFSEGGLDYLGNSNLVHAQ 246
Query: 153 QLLLWFCFAEFFSLLAVNYTMQGG----DRE---PGDFSFDPLNMASTPAKRAQMELSEI 311
+L F LA Y + GG D + PG +FDPL +A P A++++ E+
Sbjct: 247 SILAILAFQVVLMGLAEAYRVNGGPLGEDSDALYPGG-AFDPLGLADDPETFAELKVKEL 305
Query: 312 KNGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPAPILNVN 425
KNGRLAM + G Q + + P+ + AH A NVN
Sbjct: 306 KNGRLAMFAMFGFYVQALVTGEGPVENWAAHVADPFNVN 344
Score = 55.1 bits (131), Expect = 3e-06
Identities = 50/159 (31%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPN--------NVIAVDAHDYFVNTGGM--Q 152
EAEL H R ML LG EA + + DY N+ + Q
Sbjct: 427 EAELIHARWAMLGALGVVFPEALAKAGVPLAEPVWFKAGAQIFSEGGLDYLGNSNLVHAQ 486
Query: 153 QLLLWFCFAEFFSLLAVNYTMQGG----DRE---PGDFSFDPLNMASTPAKRAQMELSEI 311
+L F LA Y + GG D + PG +FDPL +A P A++++ E+
Sbjct: 487 SILAILAFQVVLMGLAEAYRVNGGPLGEDSDALYPGG-AFDPLGLADDPETFAELKVKEL 545
Query: 312 KNGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPAPILNVN 425
KNGRLAM + G Q + + P+ + AH A NVN
Sbjct: 546 KNGRLAMFAMFGFYVQALVTGEGPVENWAAHVADPFNVN 584
[102][TOP]
>UniRef100_A4QPJ2 Chloroplast protein Lhcz1 (Fragment) n=1 Tax=Bigelowiella natans
RepID=A4QPJ2_BIGNA
Length = 226
Score = 55.1 bits (131), Expect = 3e-06
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 7/121 (5%)
Frame = +3
Query: 6 AELKHCRITMLACLGFFVQEAFT-LPASYF--PNNVIAVDAHDYFVNTGGMQQLLLWFCF 176
AE+KH R+ MLA + + +QE + A F PN V V GG++Q+ +
Sbjct: 106 AEIKHGRLAMLAAVAWPLQELENPVLAKMFNLPNLVEETSGRSPSVLNGGLEQVSATYWT 165
Query: 177 AEFFSLLAVNYTMQ---GGDREPGDFSFDPLNM-ASTPAKRAQMELSEIKNGRLAMIGIG 344
A + + GG +PGD+ FDPLN+ A + M+ E+ NGRLAM+ I
Sbjct: 166 AVLLLTIVIETIGNDSWGGTIQPGDYGFDPLNLYPKDKAGQMAMQEKELNNGRLAMMAIL 225
Query: 345 G 347
G
Sbjct: 226 G 226
[103][TOP]
>UniRef100_A4QPI3 Chloroplast light-harvesting complex II protein Lhcbm6 (Fragment)
n=1 Tax=Euglena gracilis RepID=A4QPI3_EUGGR
Length = 825
Score = 55.1 bits (131), Expect = 3e-06
Identities = 50/159 (31%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPN--------NVIAVDAHDYFVNTGGM--Q 152
EAEL H R ML LG EA + + DY N+ + Q
Sbjct: 170 EAELIHARWAMLGALGVVFPEALAKAGVPLAEPVWFKAGAQIFSEGGLDYLGNSNLVHAQ 229
Query: 153 QLLLWFCFAEFFSLLAVNYTMQGG----DRE---PGDFSFDPLNMASTPAKRAQMELSEI 311
+L F LA Y + GG D + PG +FDPL +A P A++++ E+
Sbjct: 230 SILAILAFQVVLMGLAEAYRVNGGPLGEDSDALYPGG-AFDPLGLADDPETFAELKVKEL 288
Query: 312 KNGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPAPILNVN 425
KNGRLAM + G Q + + P+ + AH A NVN
Sbjct: 289 KNGRLAMFAMFGFYVQALVTGEGPVENWAAHVADPFNVN 327
Score = 55.1 bits (131), Expect = 3e-06
Identities = 50/159 (31%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPN--------NVIAVDAHDYFVNTGGM--Q 152
EAEL H R ML LG EA + + DY N+ + Q
Sbjct: 410 EAELIHARWAMLGALGVVFPEALAKAGVPLAEPVWFKAGAQIFSEGGLDYLGNSNLVHAQ 469
Query: 153 QLLLWFCFAEFFSLLAVNYTMQGG----DRE---PGDFSFDPLNMASTPAKRAQMELSEI 311
+L F LA Y + GG D + PG +FDPL +A P A++++ E+
Sbjct: 470 SILAILAFQVVLMGLAEAYRVNGGPLGEDSDALYPGG-AFDPLGLADDPETFAELKVKEL 528
Query: 312 KNGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPAPILNVN 425
KNGRLAM + G Q + + P+ + AH A NVN
Sbjct: 529 KNGRLAMFAMFGFYVQALVTGEGPVENWAAHVADPFNVN 567
Score = 55.1 bits (131), Expect = 3e-06
Identities = 50/159 (31%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPN--------NVIAVDAHDYFVNTGGM--Q 152
EAEL H R ML LG EA + + DY N+ + Q
Sbjct: 650 EAELIHARWAMLGALGVVFPEALAKAGVPLAEPVWFKAGAQIFSEGGLDYLGNSNLVHAQ 709
Query: 153 QLLLWFCFAEFFSLLAVNYTMQGG----DRE---PGDFSFDPLNMASTPAKRAQMELSEI 311
+L F LA Y + GG D + PG +FDPL +A P A++++ E+
Sbjct: 710 SILAILAFQVVLMGLAEAYRVNGGPLGEDSDALYPGG-AFDPLGLADDPETFAELKVKEL 768
Query: 312 KNGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPAPILNVN 425
KNGRLAM + G Q + + P+ + AH A NVN
Sbjct: 769 KNGRLAMFAMFGFYVQALVTGEGPVENWAAHVADPFNVN 807
[104][TOP]
>UniRef100_P04781 Chlorophyll a-b binding protein 22R, chloroplastic n=1 Tax=Petunia
sp. RepID=CB23_PETSP
Length = 267
Score = 55.1 bits (131), Expect = 3e-06
Identities = 49/160 (30%), Positives = 65/160 (40%), Gaps = 19/160 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPN--------NVIAVDAHDYFVNTG---GM 149
E E+ HCR ML LG E F F + + DY N
Sbjct: 98 ELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQ 157
Query: 150 QQLLLWFCFAEFFSLLAVNYTMQGGDRE-------PGDFSFDPLNMASTPAKRAQMELSE 308
L +W C + Y + GG PG SFDPL +A P A++++ E
Sbjct: 158 SILAIWACQVVLMGAVE-GYRVAGGPLGEVIDPLYPGG-SFDPLGLAEDPEAFAELKVKE 215
Query: 309 IKNGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPAPILNVN 425
IKNGRLAM + G Q + K P+ +L H A +N N
Sbjct: 216 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
[105][TOP]
>UniRef100_UPI00019839E5 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI00019839E5
Length = 558
Score = 54.7 bits (130), Expect = 4e-06
Identities = 49/160 (30%), Positives = 66/160 (41%), Gaps = 19/160 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPN--------NVIAVDAHDYFVNTG---GM 149
E E+ HCR ML LG E + F + + DY N G
Sbjct: 389 ELEVIHCRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPGLVHAQ 448
Query: 150 QQLLLWFCFAEFFSLLAVNYTMQGGDRE-------PGDFSFDPLNMASTPAKRAQMELSE 308
L +W C + Y + GG PG SFDPL +A P A++++ E
Sbjct: 449 SILAIWACQVILMGAVE-GYRIGGGPLGEVIDPLYPGG-SFDPLGLADDPEAFAELKVKE 506
Query: 309 IKNGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPAPILNVN 425
IKNGRLAM + G Q + K P+ +L H A +N N
Sbjct: 507 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 546
[106][TOP]
>UniRef100_Q9ATC4 Light harvesting complex protein 2 (Fragment) n=1 Tax=Vaucheria
litorea RepID=Q9ATC4_VAULI
Length = 150
Score = 54.7 bits (130), Expect = 4e-06
Identities = 44/139 (31%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFV-----NTGGMQQLLLW 167
E+E+KH RI MLA +G V A + PN D ++ F N G+ Q++
Sbjct: 13 ESEIKHGRICMLAFVGTLVIHA----GIHIPNLGYTSDWYNSFPEFVAKNPLGLAQVIAG 68
Query: 168 FCFAEFFSLLAVNYTMQG-GDREPGDFSFDPLNM--ASTPAKRAQMELSEIKNGRLAMIG 338
E F G +R+PG +FD LN+ ++ ++L EIKNGRLAM+
Sbjct: 69 LTIWEGFHGTETGLMWTGEANRKPGHLNFDLLNLMKGKNESQLKSIQLKEIKNGRLAMVA 128
Query: 339 IGGLIHQEFYSHK-PIMDL 392
+ + F S P++DL
Sbjct: 129 MAAFASEHFISGSVPLLDL 147
[107][TOP]
>UniRef100_Q41425 Chlorophyll a/b binding protein n=1 Tax=Solanum tuberosum
RepID=Q41425_SOLTU
Length = 265
Score = 54.7 bits (130), Expect = 4e-06
Identities = 49/161 (30%), Positives = 66/161 (40%), Gaps = 20/161 (12%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQL-------- 158
E E+ HCR ML LG E F V+ A + GG+ L
Sbjct: 96 ELEVIHCRWAMLGALGCVFPELLARNGVKF-GEVVWFKAGSQIFSEGGLDYLGNPSLVHA 154
Query: 159 ----LLWFCFAEFFSLLAVNYTMQGGDRE-------PGDFSFDPLNMASTPAKRAQMELS 305
+W C + Y + GG PG SFDPL +A P A++++
Sbjct: 155 QSILAIWACQVVLMGAVE-GYRIAGGPLGEVVDPLYPGG-SFDPLGLAEDPEAFAELKVK 212
Query: 306 EIKNGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPAPILNVN 425
EIKNGRLAM + G Q + K P+ +L H A +N N
Sbjct: 213 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
[108][TOP]
>UniRef100_Q019J1 Fucoxanthin chlorophyll a/c binding protein (ISS) n=1
Tax=Ostreococcus tauri RepID=Q019J1_OSTTA
Length = 250
Score = 54.7 bits (130), Expect = 4e-06
Identities = 43/137 (31%), Positives = 60/137 (43%), Gaps = 17/137 (12%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFAE 182
EAE+ H R+ MLA +GF V E + F V VN L WF
Sbjct: 69 EAEVAHSRVCMLATVGFLVGEQVEGSSFLFDAQVTGPA-----VNHFQQVPLPFWFAIGS 123
Query: 183 FFSLLAVNYTMQGGDREPG---------------DFSFDPLNMASTPAKRA--QMELSEI 311
++ A + +Q G ++PG D SFDPL + + + + L E+
Sbjct: 124 VIAI-AESARVQAGWQDPGQSDKLFLLKDGYTPGDLSFDPLGLGNGKSAEELDALRLKEL 182
Query: 312 KNGRLAMIGIGGLIHQE 362
NGRLAMI I G++ QE
Sbjct: 183 NNGRLAMIAISGMVAQE 199
[109][TOP]
>UniRef100_A7Q0V3 Chromosome chr7 scaffold_42, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7Q0V3_VITVI
Length = 263
Score = 54.7 bits (130), Expect = 4e-06
Identities = 49/160 (30%), Positives = 66/160 (41%), Gaps = 19/160 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPN--------NVIAVDAHDYFVNTG---GM 149
E E+ HCR ML LG E + F + + DY N G
Sbjct: 94 ELEVIHCRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPGLVHAQ 153
Query: 150 QQLLLWFCFAEFFSLLAVNYTMQGGDRE-------PGDFSFDPLNMASTPAKRAQMELSE 308
L +W C + Y + GG PG SFDPL +A P A++++ E
Sbjct: 154 SILAIWACQVILMGAVE-GYRIGGGPLGEVIDPLYPGG-SFDPLGLADDPEAFAELKVKE 211
Query: 309 IKNGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPAPILNVN 425
IKNGRLAM + G Q + K P+ +L H A +N N
Sbjct: 212 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 251
[110][TOP]
>UniRef100_Q00984 Chlorophyll a/b-binding protein n=1 Tax=Pinus thunbergii
RepID=Q00984_PINTH
Length = 266
Score = 54.3 bits (129), Expect = 5e-06
Identities = 48/158 (30%), Positives = 64/158 (40%), Gaps = 19/158 (12%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPN--------NVIAVDAHDYFVNTG---GM 149
E E+ HCR ML LG E F + + DY N
Sbjct: 97 ELEVIHCRWAMLGALGCLFPELLAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 156
Query: 150 QQLLLWFCFAEFFSLLAVNYTMQGGDREPG------DFSFDPLNMASTPAKRAQMELSEI 311
L +W C L+ Y + GG G +FDPL +A P A++++ EI
Sbjct: 157 SILAIWACQVVLMGLIE-GYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEI 215
Query: 312 KNGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPA-PILN 419
KNGRLAM + G Q + K PI +L H A P+ N
Sbjct: 216 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVAN 253
[111][TOP]
>UniRef100_O64449 Light harvesting chlorophyll a/b-binding protein n=1 Tax=Nicotiana
sylvestris RepID=O64449_NICSY
Length = 267
Score = 54.3 bits (129), Expect = 5e-06
Identities = 48/160 (30%), Positives = 66/160 (41%), Gaps = 19/160 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFP--------NNVIAVDAHDYFVNTG---GM 149
E E+ HCR ML LG E F + + + DY N
Sbjct: 98 ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ 157
Query: 150 QQLLLWFCFAEFFSLLAVNYTMQGGDRE-------PGDFSFDPLNMASTPAKRAQMELSE 308
L +W C + Y + GG PG SFDPL +A P A++++ E
Sbjct: 158 SILAIWACQVVLMGAIE-GYRVAGGPLGEVTDPLYPGG-SFDPLGLADDPEAFAELKVKE 215
Query: 309 IKNGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPAPILNVN 425
IKNGRLAM + G Q + K P+ +L+ H A +N N
Sbjct: 216 IKNGRLAMFSMFGFFVQAIVTGKGPLENLVDHLADPVNNN 255
[112][TOP]
>UniRef100_B9H5X9 Light-harvesting complex II protein Lhcb7 n=1 Tax=Populus
trichocarpa RepID=B9H5X9_POPTR
Length = 338
Score = 54.3 bits (129), Expect = 5e-06
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 27/167 (16%)
Frame = +3
Query: 9 ELKHCRITMLACLGFFVQEAFTLPASYF---------PNNVIAVDAHDYFVN-----TGG 146
E+ H R MLA LG + E L ++ + + D DY GG
Sbjct: 165 EILHARWAMLAALGALIPEVLDLSGAFHFIEPVWWRVGYSKLKGDTLDYLGIPGLHFAGG 224
Query: 147 MQQLLLWFC---------FAEFFSLLAVN---YTMQGGDREPGDFSFDPLNMASTPAKRA 290
L++ FC +A + + A+ + G PG FDPLN++ P
Sbjct: 225 QGVLVIAFCQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGILFDPLNLSKDPVSFE 284
Query: 291 QMELSEIKNGRLAMIG-IGGLIHQEFYSHKPIMDLLAHPAPILNVNM 428
++++ EIKNGRLAM+ +G I P+ +L+ H + L+ N+
Sbjct: 285 ELKVKEIKNGRLAMVAWLGFYIQAALTGKGPVENLVEHISDPLHNNL 331
[113][TOP]
>UniRef100_B7GCV9 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7GCV9_PHATR
Length = 232
Score = 54.3 bits (129), Expect = 5e-06
Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDA--HDYFVNTGGMQQLLLWFCF 176
+AE+KH R+ MLA LG+ E + + + VD V GG+ ++ + +
Sbjct: 85 DAEIKHGRLAMLAALGWPASEVWDRAIANAVSMPPVVDESLRAPSVLNGGLGKIPVEYWA 144
Query: 177 AEFFS---LLAVNYTMQGGDRE--PGDFSFDPLNM-ASTPAKRAQMELSEIKNGRLAMIG 338
A F + N + D PG+ +FDPL + + AK+ +M+L EIKNGRLAMI
Sbjct: 145 ASLFVASFIECANIQKRRTDDRWFPGNLNFDPLGLYPKSEAKQREMQLKEIKNGRLAMIA 204
Query: 339 IGGLIHQEFYSHKPIMD 389
I QE ++D
Sbjct: 205 ITAFAIQEAIVGTSVVD 221
[114][TOP]
>UniRef100_B5A4I6 Light harvesting complex protein LHCII-3 n=1 Tax=Gymnochlora
stellata RepID=B5A4I6_GYMST
Length = 300
Score = 54.3 bits (129), Expect = 5e-06
Identities = 48/149 (32%), Positives = 64/149 (42%), Gaps = 14/149 (9%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQE-----AFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLW 167
E E+ H R ML LG E F LP + I + DY N +
Sbjct: 136 ETEVIHARWAMLGALGCIFPELLNSAGFNLPVWFKAGGTIFENGIDYLGNPNLVHAQSAL 195
Query: 168 FCFAEFFSLLAVN--YTMQGGDR-EPGDF-----SFDPLNMASTPAKRAQMELSEIKNGR 323
+ L+ + Y GG EP D +FDPL A P+K A++++ EIKNGR
Sbjct: 196 AVLSVQVVLMGASEAYRFNGGPLGEPADVLYPGGAFDPLGFAKDPSKAAELKVKEIKNGR 255
Query: 324 LAMIGIGGLIHQEFYSHK-PIMDLLAHPA 407
LAM + G Q + K PI +L H A
Sbjct: 256 LAMTAMLGYYVQALATGKGPIENLSEHLA 284
[115][TOP]
>UniRef100_A4RXC5 Fucoxanthin chlorophyll a/c binding protein-like protein n=1
Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RXC5_OSTLU
Length = 252
Score = 54.3 bits (129), Expect = 5e-06
Identities = 44/138 (31%), Positives = 66/138 (47%), Gaps = 18/138 (13%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFCFAE 182
EAEL H R++MLA +GF V E + F V + + QQ+ F FA
Sbjct: 70 EAELTHGRVSMLATVGFLVGEQVEGSSFLFDAQVTGPAVNHF-------QQVPTPFWFAI 122
Query: 183 FFSL-LAVNYTMQGGDREPG---------------DFSFDPLNMASTPAKRA--QMELSE 308
++ +A + +Q G ++PG D +FDPL + ++ ++ L E
Sbjct: 123 GATIAIAESTRVQAGWQDPGQSDKLFLLKDGYTPGDLNFDPLGLGRGKSEEELDELRLKE 182
Query: 309 IKNGRLAMIGIGGLIHQE 362
+ NGRLAMI I G+I QE
Sbjct: 183 LNNGRLAMISISGMIAQE 200
[116][TOP]
>UniRef100_Q1MWL3 Fucoxanthin chlorophyll a/c binding protein n=1 Tax=Pleurochrysis
carterae RepID=Q1MWL3_PLECA
Length = 207
Score = 53.9 bits (128), Expect = 7e-06
Identities = 49/148 (33%), Positives = 65/148 (43%), Gaps = 14/148 (9%)
Frame = +3
Query: 9 ELKHCRITMLACLGFFVQEA---------FTLPASYFPNNVIAVDAHDYFVNTGGMQQLL 161
ELKH RI MLA LG V A F LP + P + A+ V G+ Q+
Sbjct: 63 ELKHGRICMLAILGHVVTSAGVRLPGELSFGLPFASVPTGIKALSV----VPAAGLAQIF 118
Query: 162 LWFCFAEFFSLLAVNYTMQGGDREPGDFSFDPLNMA---STPAKRAQMELSEIKNGRLAM 332
+ F E LAV ++G PGDF ++ T ++A E+ NGR A
Sbjct: 119 AFVGFLE----LAVMKDVEGTGEFPGDFRNGFIDFGWDNFTEEEKASKRGIELNNGRAAQ 174
Query: 333 IGIGGLIHQEFYSHKP--IMDLLAHPAP 410
+GI L+ E + P I DLL P P
Sbjct: 175 MGILALMVHEMLDNNPYIINDLLGAPVP 202
[117][TOP]
>UniRef100_C6T8S8 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T8S8_SOYBN
Length = 267
Score = 53.9 bits (128), Expect = 7e-06
Identities = 48/152 (31%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQLLLWFC--- 173
+AEL HCR ML G F+ E T + + +YF +T + + L+F
Sbjct: 102 QAELVHCRWAMLGAAGIFIPEFLTKIGVLNTPSWYSAGELEYFTDTTTLFIVELFFIGWA 161
Query: 174 ----FAEFFSLLAVNYT-------MQGGD-REPGDFSFDPLNMAS-TPAKRAQMELSEIK 314
+A+ VN + G D PG FDPL + +P K + EIK
Sbjct: 162 EGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGTGSPQKIKDLRTKEIK 221
Query: 315 NGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPA 407
NGRLAM+ + G Q Y+ PI +L AH A
Sbjct: 222 NGRLAMLAVMGAWFQHIYTATGPIDNLFAHLA 253
[118][TOP]
>UniRef100_P27491 Chlorophyll a-b binding protein 7, chloroplastic n=1 Tax=Nicotiana
tabacum RepID=CB27_TOBAC
Length = 267
Score = 53.9 bits (128), Expect = 7e-06
Identities = 48/160 (30%), Positives = 66/160 (41%), Gaps = 19/160 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFP--------NNVIAVDAHDYFVNTG---GM 149
E E+ HCR ML LG E F + + + DY N
Sbjct: 98 ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ 157
Query: 150 QQLLLWFCFAEFFSLLAVNYTMQGGDRE-------PGDFSFDPLNMASTPAKRAQMELSE 308
L +W C + Y + GG PG SFDPL +A P A++++ E
Sbjct: 158 SILAIWACQVVLMGAIE-GYRVAGGPLGEVTDPLYPGG-SFDPLGLADDPEAFAELKVKE 215
Query: 309 IKNGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPAPILNVN 425
IKNGRLAM + G Q + K P+ +L+ H A +N N
Sbjct: 216 IKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNNN 255
[119][TOP]
>UniRef100_Q41422 Chlorophyll a/b binding protein n=1 Tax=Solanum tuberosum
RepID=Q41422_SOLTU
Length = 265
Score = 53.5 bits (127), Expect = 9e-06
Identities = 48/160 (30%), Positives = 66/160 (41%), Gaps = 19/160 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFP--------NNVIAVDAHDYFVNTG---GM 149
E E+ HCR ML LG E + F + + + DY N
Sbjct: 96 ELEVIHCRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ 155
Query: 150 QQLLLWFCFAEFFSLLAVNYTMQGGDRE-------PGDFSFDPLNMASTPAKRAQMELSE 308
L +W C + Y + GG PG SFDPL +A P A++++ E
Sbjct: 156 SILAIWACQVVLMGAVE-GYRIAGGPLGEVVDPLYPGG-SFDPLGLAEDPEAFAELKVKE 213
Query: 309 IKNGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPAPILNVN 425
IKNGRLAM + G Q + K P+ +L H A +N N
Sbjct: 214 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
[120][TOP]
>UniRef100_C4P6Y3 Chloroplast light-harvesting chlorophyll-a/b binding protein n=1
Tax=Ankistrodesmus convolutus RepID=C4P6Y3_9CHLO
Length = 248
Score = 53.5 bits (127), Expect = 9e-06
Identities = 50/157 (31%), Positives = 68/157 (43%), Gaps = 22/157 (14%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNN---------VIAVDAHDYFVNTGGM-- 149
E EL H R ML LG V E + P+ + A D +Y N +
Sbjct: 76 EIELIHARWAMLGALGCVVPELLAKNGTPLPDGGVWFKAGAAIFADDGLNYLGNPNLIHA 135
Query: 150 QQLLLWFCFAEFFSLLAVNYTMQGG---------DR-EPGDFSFDPLNMASTPAKRAQME 299
Q +L F A ++ GG DR PGD FDP+ +A P A+++
Sbjct: 136 QSILATLAFQVVVMGAAESFRFNGGAPGGFLEGNDRLYPGD-QFDPMGLAEDPDTFAELK 194
Query: 300 LSEIKNGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPA 407
+ EIKNGRLAM + G Q + + PI +L AH A
Sbjct: 195 VKEIKNGRLAMFSMFGFFVQAIVTGQGPIANLDAHLA 231
[121][TOP]
>UniRef100_B8LDJ7 Fucoxanthin chl a/c light-harvesting protein n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8LDJ7_THAPS
Length = 222
Score = 53.5 bits (127), Expect = 9e-06
Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 10/137 (7%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYF---PNNVIAVDAHDYFVNTGGMQQLL--LW 167
EAE+KH R+ MLA +G+ + E F + F P+ + A +N GG+ ++ W
Sbjct: 75 EAEIKHSRLAMLAAVGWPLAEKFDGAIAQFLGLPSALTNSGASPSVLN-GGLDKIEPDYW 133
Query: 168 FCFAEFFSL--LAVNYTMQGGDRE--PGDFSFDPLNMASTPAKRAQ-MELSEIKNGRLAM 332
A L LA N T ++ PGD FDPL + + M+ EIK+GR+AM
Sbjct: 134 VIVAAIAGLAELANNETKTATGKKYTPGDCGFDPLGLMPQDKEGIMAMQTKEIKHGRIAM 193
Query: 333 IGIGGLIHQEFYSHKPI 383
+ I G + QE P+
Sbjct: 194 MAILGYVVQEALYRAPV 210
[122][TOP]
>UniRef100_B4G143 Chlorophyll a-b binding protein 2 n=1 Tax=Zea mays
RepID=B4G143_MAIZE
Length = 264
Score = 53.5 bits (127), Expect = 9e-06
Identities = 48/160 (30%), Positives = 65/160 (40%), Gaps = 19/160 (11%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFP--------NNVIAVDAHDYFVNTG---GM 149
E E+ HCR ML LG E F + + + DY N
Sbjct: 95 ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQ 154
Query: 150 QQLLLWFCFAEFFSLLAVNYTMQGGDRE-------PGDFSFDPLNMASTPAKRAQMELSE 308
L +W C + Y + GG PG SFDPL +A P A++++ E
Sbjct: 155 SILAIWACQVVLMGAVE-GYRIAGGPLGEVVDPLYPGG-SFDPLGLADDPEAFAELKVKE 212
Query: 309 IKNGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPAPILNVN 425
IKNGRLAM + G Q + K P+ +L H A +N N
Sbjct: 213 IKNGRLAMFSMFGFFVQAIVTGKGPVENLADHLADPVNNN 252
[123][TOP]
>UniRef100_A9TKU6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9TKU6_PHYPA
Length = 266
Score = 53.5 bits (127), Expect = 9e-06
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +3
Query: 216 QGGDREPGDFSFDPLNMASTPAKRAQMELSEIKNGRLAMIGIGGLIHQEFYSHK-PIMDL 392
+GGD PG FDPL +A P A++++ E+KNGRLAM + G Q + K P+ +L
Sbjct: 184 EGGDLYPGGKYFDPLGLADDPETLAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 243
Query: 393 LAHPA-PILN 419
L H A P+ N
Sbjct: 244 LDHLANPVSN 253
[124][TOP]
>UniRef100_A5B523 Chromosome chr18 scaffold_61, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A5B523_VITVI
Length = 290
Score = 53.5 bits (127), Expect = 9e-06
Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Frame = +3
Query: 9 ELKHCRITMLACLGFFVQEAFTL-------PASYFPNNVIAVDAHDYFVNTGGMQQLLLW 167
EL H R ML GF + EAF A +F + +D + + L++
Sbjct: 124 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLIF 183
Query: 168 FCFAEFFSLLAVNY--TMQGGDRE----PGDFSFDPLNMASTPAKRAQMELSEIKNGRLA 329
AE + Y + G D E PG FDPL +A+ P + A +++ EIKNGRLA
Sbjct: 184 AVVAEVVLVGGAEYYRIINGLDLEDKLHPGG-PFDPLGLANDPDQAALLKVKEIKNGRLA 242
Query: 330 MIGIGGLIHQEFYSHK-PIMDLLAH 401
M + G Q + + + P+ +L AH
Sbjct: 243 MFAMLGFFIQAYVTGEGPVENLAAH 267
[125][TOP]
>UniRef100_A2SY21 Chloroplast light-harvesting complex II protein Lhcbm2 n=1
Tax=Mesostigma viride RepID=A2SY21_MESVI
Length = 267
Score = 53.5 bits (127), Expect = 9e-06
Identities = 52/168 (30%), Positives = 70/168 (41%), Gaps = 18/168 (10%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGM----------- 149
E EL H R ML LG F+ EA + + A GG+
Sbjct: 91 EIELMHARWAMLGTLGCFLPEALEKYSGINFGESVWFKAGGQIFQEGGLDYLGNPSLVHA 150
Query: 150 QQLLLWFCFAEFFSLLAVNYTMQGGDR-EPGDF-----SFDPLNMASTPAKRAQMELSEI 311
Q ++ L Y + GG E GD SFDPL + P A++++ EI
Sbjct: 151 QSIIATVFIQALLMGLVEGYRVGGGPLGEAGDKMYPGGSFDPLGLGDDPDTLAELKVKEI 210
Query: 312 KNGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPAPILNVNM*FFFLSSS 452
KNGRLAM + G Q + K P+ +L AH A VN F + +SS
Sbjct: 211 KNGRLAMFSMFGYFIQAIVTGKGPVENLDAHLADPF-VNNGFAYATSS 257
[126][TOP]
>UniRef100_A2SY19 Chloroplast light-harvesting complex II protein Lhcbm1 n=1
Tax=Mesostigma viride RepID=A2SY19_MESVI
Length = 267
Score = 53.5 bits (127), Expect = 9e-06
Identities = 52/168 (30%), Positives = 70/168 (41%), Gaps = 18/168 (10%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGM----------- 149
E EL H R ML LG F+ EA + + A GG+
Sbjct: 91 EIELMHARWAMLGTLGCFLPEALEKYSGINFGESVWFKAGGQIFQEGGLDYLGNPSLVHA 150
Query: 150 QQLLLWFCFAEFFSLLAVNYTMQGGDR-EPGDF-----SFDPLNMASTPAKRAQMELSEI 311
Q ++ L Y + GG E GD SFDPL + P A++++ EI
Sbjct: 151 QSIIATVFIQALLMGLVEGYRVGGGPLGEAGDKMYPGGSFDPLGLGDDPDTLAELKVKEI 210
Query: 312 KNGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPAPILNVNM*FFFLSSS 452
KNGRLAM + G Q + K P+ +L AH A VN F + +SS
Sbjct: 211 KNGRLAMFSMFGYFIQAIVTGKGPVENLDAHLADPF-VNNGFAYATSS 257
[127][TOP]
>UniRef100_P10049 Chlorophyll a-b binding protein type I, chloroplastic n=1 Tax=Pinus
thunbergii RepID=CB21_PINTH
Length = 266
Score = 53.5 bits (127), Expect = 9e-06
Identities = 48/159 (30%), Positives = 65/159 (40%), Gaps = 20/159 (12%)
Frame = +3
Query: 3 EAELKHCRITMLACLGFFVQEAFTLPASYFPNNVIAVDAHDYFVNTGGMQQ--------- 155
E E+ HCR ML LG E F + A + GG+
Sbjct: 97 ELEVIHCRWAMLGALGCVFPELLAKNGLKF-GEAVWFKAGAQIFSEGGLDYAGNPNLIHA 155
Query: 156 ---LLLWFCFAEFFSLLAVNYTMQGGDREPG------DFSFDPLNMASTPAKRAQMELSE 308
L +W C L+ Y + GG G +FDPL +A P A++++ E
Sbjct: 156 QSILAIWACQVVLMGLIE-GYRVGGGTLGEGLDPLLPGGAFDPLGLADDPEACAELKVKE 214
Query: 309 IKNGRLAMIGIGGLIHQEFYSHK-PIMDLLAHPA-PILN 419
IKNGRLAM + G Q + K PI +L H A P+ N
Sbjct: 215 IKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVAN 253