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[1][TOP]
>UniRef100_Q7XYJ6 Ribosomal protein rpS22 (Fragment) n=1 Tax=Bigelowiella natans
RepID=Q7XYJ6_BIGNA
Length = 170
Score = 80.1 bits (196), Expect = 7e-14
Identities = 35/57 (61%), Positives = 45/57 (78%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
VV+RK F MPP S+EDA +CL LDHD YV+RN +T+EINVVY+R G+G I+PE+
Sbjct: 113 VVRRKKFPMPPISIEDATLCLDYLDHDFYVFRNSETKEINVVYRRAEGGVGLIEPEQ 169
[2][TOP]
>UniRef100_B1WZE1 Light repressed protein n=1 Tax=Cyanothece sp. ATCC 51142
RepID=B1WZE1_CYAA5
Length = 201
Score = 78.6 bits (192), Expect = 2e-13
Identities = 33/58 (56%), Positives = 45/58 (77%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
EV++ K F MPP S+E+A L+++DHD Y++RN+DT+EINV+Y RNH G G IQP E
Sbjct: 135 EVIRMKYFAMPPMSIEEAKHQLELVDHDFYMFRNQDTDEINVIYMRNHGGFGVIQPRE 192
[3][TOP]
>UniRef100_A3IRI7 Light repressed protein n=1 Tax=Cyanothece sp. CCY0110
RepID=A3IRI7_9CHRO
Length = 199
Score = 78.6 bits (192), Expect = 2e-13
Identities = 33/58 (56%), Positives = 45/58 (77%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
EV++ K F MPP S+E+A L+++DHD Y++RN+DT+EINV+Y RNH G G IQP E
Sbjct: 133 EVIRMKYFAMPPMSIEEAKHQLELVDHDFYMFRNQDTDEINVIYMRNHGGFGVIQPRE 190
[4][TOP]
>UniRef100_P74518 Light repressed protein A homolog n=1 Tax=Synechocystis sp. PCC
6803 RepID=LRTA_SYNY3
Length = 191
Score = 78.6 bits (192), Expect = 2e-13
Identities = 33/58 (56%), Positives = 46/58 (79%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
EV++ K F MPP ++EDA+ L+++DHD Y++RNKDT+EINV+Y RNH G G IQP +
Sbjct: 132 EVLRMKYFAMPPMAIEDALEQLQLVDHDFYMFRNKDTDEINVIYIRNHGGYGVIQPHQ 189
[5][TOP]
>UniRef100_Q8DKM6 LrtA protein n=1 Tax=Thermosynechococcus elongatus BP-1
RepID=Q8DKM6_THEEB
Length = 209
Score = 77.4 bits (189), Expect = 5e-13
Identities = 33/57 (57%), Positives = 46/57 (80%)
Frame = -2
Query: 271 QEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
++VV+ K F MPP ++++A+ L+M+DHD YV+RN+DT EINVVY+RNH G G IQP
Sbjct: 129 EQVVRMKYFAMPPMTIQEALEHLEMVDHDFYVFRNRDTGEINVVYERNHGGYGVIQP 185
[6][TOP]
>UniRef100_C7QW97 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Cyanothece RepID=C7QW97_CYAP0
Length = 205
Score = 77.4 bits (189), Expect = 5e-13
Identities = 31/56 (55%), Positives = 46/56 (82%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
EV++ K F MPP ++++A+ L+++DHD Y++RNKDT+EINV+Y+RNH G G IQP
Sbjct: 140 EVIRMKYFAMPPMTIDEALHQLELVDHDFYMFRNKDTDEINVIYQRNHGGYGVIQP 195
[7][TOP]
>UniRef100_B0JSS1 Light repressed protein A homolog n=1 Tax=Microcystis aeruginosa
NIES-843 RepID=B0JSS1_MICAN
Length = 199
Score = 75.9 bits (185), Expect = 1e-12
Identities = 32/56 (57%), Positives = 44/56 (78%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
EVV+ K F MPP ++E+A+ L+++DHD Y++ NKDT EINV+Y+RNH G G IQP
Sbjct: 133 EVVRMKYFAMPPMTIEEALTQLQLVDHDFYMFCNKDTNEINVIYQRNHGGFGVIQP 188
[8][TOP]
>UniRef100_Q4CAE1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Crocosphaera watsonii WH 8501 RepID=Q4CAE1_CROWT
Length = 199
Score = 75.1 bits (183), Expect = 2e-12
Identities = 32/58 (55%), Positives = 44/58 (75%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
EV++ K F MP S+E+A L+++DHD Y++RN++TEEINV+Y RNH G G IQP E
Sbjct: 133 EVIRMKYFAMPSMSIEEAKHQLELVDHDFYMFRNQETEEINVIYMRNHGGFGIIQPRE 190
[9][TOP]
>UniRef100_A8YEZ8 LrtA protein n=1 Tax=Microcystis aeruginosa PCC 7806
RepID=A8YEZ8_MICAE
Length = 199
Score = 74.3 bits (181), Expect = 4e-12
Identities = 31/56 (55%), Positives = 44/56 (78%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
EVV+ K F MPP ++E+A+ L+++DHD +++ NKDT EINV+Y+RNH G G IQP
Sbjct: 133 EVVRMKYFAMPPMTIEEALTQLQLVDHDFFMFCNKDTNEINVIYQRNHGGFGVIQP 188
[10][TOP]
>UniRef100_B7KLI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7424 RepID=B7KLI5_CYAP7
Length = 199
Score = 73.6 bits (179), Expect = 7e-12
Identities = 31/56 (55%), Positives = 44/56 (78%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
EVV+ K F MPP S+++A+ L+++DHD +++RN+DT EINV+Y RNH G G IQP
Sbjct: 133 EVVRMKYFGMPPMSIDEALEQLQLVDHDFFMFRNRDTNEINVIYIRNHGGFGVIQP 188
[11][TOP]
>UniRef100_B4VJW0 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Microcoleus chthonoplastes PCC 7420
RepID=B4VJW0_9CYAN
Length = 215
Score = 73.6 bits (179), Expect = 7e-12
Identities = 31/56 (55%), Positives = 43/56 (76%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
EVV+ K F MPP ++E+A L+++DHD Y++RN T+EINV+Y+RNH G G IQP
Sbjct: 132 EVVRMKYFAMPPMTIEEATEQLQLVDHDFYMFRNAKTDEINVIYERNHGGYGVIQP 187
[12][TOP]
>UniRef100_B8HK26 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7425 RepID=B8HK26_CYAP4
Length = 209
Score = 73.2 bits (178), Expect = 9e-12
Identities = 31/57 (54%), Positives = 44/57 (77%)
Frame = -2
Query: 271 QEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
+EVV+ K F MPP +L +A+ L+++DHD Y++RN +T EINV+Y+RNH G G IQP
Sbjct: 129 EEVVRTKYFAMPPMTLREALEQLELVDHDFYMFRNAETGEINVIYERNHGGYGVIQP 185
[13][TOP]
>UniRef100_Q5N179 Light repressed protein A homolog n=1 Tax=Synechococcus elongatus
PCC 6301 RepID=Q5N179_SYNP6
Length = 207
Score = 71.2 bits (173), Expect = 3e-11
Identities = 30/60 (50%), Positives = 44/60 (73%)
Frame = -2
Query: 271 QEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEED 92
Q++V+ K F MP ++EDA+ L+++DHD Y++RN T EINV+Y+RNH G G IQP +
Sbjct: 133 QDIVRTKYFAMPAMTVEDALAQLQLVDHDFYMFRNAATGEINVIYERNHGGYGVIQPRPE 192
[14][TOP]
>UniRef100_Q31KN7 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Synechococcus elongatus PCC 7942 RepID=Q31KN7_SYNE7
Length = 207
Score = 71.2 bits (173), Expect = 3e-11
Identities = 30/60 (50%), Positives = 44/60 (73%)
Frame = -2
Query: 271 QEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEED 92
Q++V+ K F MP ++EDA+ L+++DHD Y++RN T EINV+Y+RNH G G IQP +
Sbjct: 133 QDIVRTKYFAMPAMTVEDALAQLQLVDHDFYMFRNAATGEINVIYERNHGGYGVIQPRPE 192
[15][TOP]
>UniRef100_B4AWR2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7822 RepID=B4AWR2_9CHRO
Length = 199
Score = 70.9 bits (172), Expect = 4e-11
Identities = 31/56 (55%), Positives = 43/56 (76%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
EVV+ K F MP S+E+A+ L+++DHD Y++RN++T EINV+Y RNH G G IQP
Sbjct: 133 EVVRMKYFAMPLMSIEEALEQLQLVDHDFYMFRNRNTNEINVIYIRNHGGYGVIQP 188
[16][TOP]
>UniRef100_A0YIH4 Light-repressed protein n=1 Tax=Lyngbya sp. PCC 8106
RepID=A0YIH4_9CYAN
Length = 212
Score = 70.9 bits (172), Expect = 4e-11
Identities = 33/60 (55%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKR-NHDGIGHIQPEED 92
EVV+ K F MPP +L+DA+ L+++DHD YV+ N DT E+NV+YKR NH G G IQP +
Sbjct: 132 EVVRTKYFAMPPMNLQDALEQLQLVDHDFYVFCNADTGELNVIYKRVNHGGYGLIQPRNN 191
[17][TOP]
>UniRef100_P47908 Light repressed protein A n=1 Tax=Synechococcus sp. PCC 7002
RepID=LRTA_SYNP2
Length = 193
Score = 70.5 bits (171), Expect = 6e-11
Identities = 30/56 (53%), Positives = 42/56 (75%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
EVV+ K F MPP ++++A+ L+++DHD Y++ NKDT INV+Y RNH G G IQP
Sbjct: 133 EVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLNKDTNAINVIYIRNHGGYGVIQP 188
[18][TOP]
>UniRef100_A5GUZ2 Light repressed protein A homolog n=1 Tax=Synechococcus sp. RCC307
RepID=A5GUZ2_SYNR3
Length = 187
Score = 69.7 bits (169), Expect = 9e-11
Identities = 30/54 (55%), Positives = 41/54 (75%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQ 104
VV+RK F MPP S+E+A+ L+++DHD YV+RN D E+ VVY+RNH G G I+
Sbjct: 131 VVRRKYFAMPPMSVEEAIHQLEVIDHDFYVFRNADNGELQVVYQRNHGGYGVIE 184
[19][TOP]
>UniRef100_B5VV76 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Arthrospira maxima CS-328 RepID=B5VV76_SPIMA
Length = 212
Score = 69.7 bits (169), Expect = 9e-11
Identities = 30/58 (51%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
Frame = -2
Query: 271 QEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKR-NHDGIGHIQP 101
+EVV+ K F MPP S+++A+ L+++DHD Y++RN +T+EINV+Y+R +H G G IQP
Sbjct: 131 EEVVRTKYFAMPPMSIQEALEQLQLIDHDFYMFRNAETDEINVIYQRSHHGGYGVIQP 188
[20][TOP]
>UniRef100_B5IMZ9 Light repressed protein n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5IMZ9_9CHRO
Length = 195
Score = 68.6 bits (166), Expect = 2e-10
Identities = 29/56 (51%), Positives = 42/56 (75%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
V+RK F MPP SL++A+ L+++DHD YV+R ++ +I VVY RNH G G IQP++
Sbjct: 139 VRRKYFAMPPMSLDEALHQLELIDHDFYVFREAESGQIQVVYHRNHGGFGVIQPKD 194
[21][TOP]
>UniRef100_Q7U8F3 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 8102
RepID=Q7U8F3_SYNPX
Length = 195
Score = 68.2 bits (165), Expect = 3e-10
Identities = 28/53 (52%), Positives = 41/53 (77%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQ 104
V+RK F MPP SLE+A L ++DHD Y++R+KD++++ V+Y+RNH G G IQ
Sbjct: 140 VRRKYFAMPPMSLEEARRQLDLIDHDFYLFRDKDSDQLQVIYRRNHGGYGVIQ 192
[22][TOP]
>UniRef100_B2IVM1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Nostoc
punctiforme PCC 73102 RepID=B2IVM1_NOSP7
Length = 214
Score = 68.2 bits (165), Expect = 3e-10
Identities = 29/56 (51%), Positives = 42/56 (75%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
EVV+ K F+MPP +L +A+ L+++ HD Y++RN +T EINV+Y+RNH G G I P
Sbjct: 131 EVVRTKYFSMPPMTLAEALEQLQLVGHDFYMFRNSETGEINVIYERNHGGYGVIHP 186
[23][TOP]
>UniRef100_B0CDL4 High light inducible protein n=1 Tax=Acaryochloris marina MBIC11017
RepID=B0CDL4_ACAM1
Length = 212
Score = 68.2 bits (165), Expect = 3e-10
Identities = 29/59 (49%), Positives = 42/59 (71%)
Frame = -2
Query: 271 QEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
+EVV+ K F + P S+ DA+ L ++DHD YV+ N DT ++NV+Y+RNH G G IQP +
Sbjct: 137 EEVVRCKYFAISPMSVHDALEQLDLVDHDFYVFENADTGQLNVIYERNHGGYGVIQPRQ 195
[24][TOP]
>UniRef100_Q8YSA5 Light-repressed protein n=1 Tax=Nostoc sp. PCC 7120
RepID=Q8YSA5_ANASP
Length = 213
Score = 67.8 bits (164), Expect = 4e-10
Identities = 28/60 (46%), Positives = 44/60 (73%)
Frame = -2
Query: 271 QEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEED 92
+EVV+ K F+MPP ++ +A+ L+++ HD Y++ N +T EINV+Y+RNH G G IQP +
Sbjct: 131 EEVVRTKYFSMPPMTVTEALEQLQLVGHDFYMFHNAETGEINVIYERNHGGYGVIQPRNN 190
[25][TOP]
>UniRef100_Q3M699 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Anabaena variabilis ATCC 29413 RepID=Q3M699_ANAVT
Length = 213
Score = 67.8 bits (164), Expect = 4e-10
Identities = 28/60 (46%), Positives = 44/60 (73%)
Frame = -2
Query: 271 QEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEED 92
+EVV+ K F+MPP ++ +A+ L+++ HD Y++ N +T EINV+Y+RNH G G IQP +
Sbjct: 131 EEVVRTKYFSMPPMTVTEALEQLQLVGHDFYMFHNAETGEINVIYERNHGGYGVIQPRNN 190
[26][TOP]
>UniRef100_Q2JIS4 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
JA-2-3B'a(2-13) RepID=Q2JIS4_SYNJB
Length = 190
Score = 67.8 bits (164), Expect = 4e-10
Identities = 29/56 (51%), Positives = 42/56 (75%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
EVV+ K F MPP ++++A+ L+++DHD YV+RN + EINV+Y RNH G G I+P
Sbjct: 134 EVVRTKYFAMPPMTVQEALHQLELVDHDFYVFRNIENGEINVIYVRNHGGYGLIRP 189
[27][TOP]
>UniRef100_D0CH01 Sigma 54 modulation protein n=1 Tax=Synechococcus sp. WH 8109
RepID=D0CH01_9SYNE
Length = 195
Score = 67.8 bits (164), Expect = 4e-10
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
V+RK F MPP LEDA L ++DHD Y++R K+++++ V+Y+RNH G G IQ E
Sbjct: 140 VRRKYFAMPPMGLEDARRQLDLIDHDFYLFREKESDQLQVIYRRNHGGYGVIQARE 195
[28][TOP]
>UniRef100_B9YPU1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax='Nostoc
azollae' 0708 RepID=B9YPU1_ANAAZ
Length = 214
Score = 67.8 bits (164), Expect = 4e-10
Identities = 30/56 (53%), Positives = 41/56 (73%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
EVV+ K F MPP +L +A L+++ HD Y++RN +T EINV+Y+RNH G G IQP
Sbjct: 132 EVVRTKYFPMPPMTLAEAQEQLQLVGHDFYMFRNAETGEINVIYERNHGGYGVIQP 187
[29][TOP]
>UniRef100_B8LMC5 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LMC5_PICSI
Length = 321
Score = 67.8 bits (164), Expect = 4e-10
Identities = 31/62 (50%), Positives = 42/62 (67%)
Frame = -2
Query: 274 SQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
S EVV+ K F MPP S E+A+ L +DHD Y +RN ++ E+NV+YKR H G G I P+
Sbjct: 240 SDEVVRTKYFEMPPMSPEEALEQLMNVDHDFYAFRNMESGEVNVLYKRKHGGYGLIVPKN 299
Query: 94 DE 89
+E
Sbjct: 300 NE 301
[30][TOP]
>UniRef100_Q672Q2 Chloroplast-specific ribosomal protein n=1 Tax=Solanum lycopersicum
RepID=Q672Q2_SOLLC
Length = 311
Score = 67.0 bits (162), Expect = 6e-10
Identities = 30/59 (50%), Positives = 43/59 (72%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEED 92
EVV++K F MPP S+ +A+ L+ +DHD Y +RN++T EIN+VY+R G G I P+ED
Sbjct: 232 EVVRKKSFDMPPLSVNEAIEQLENVDHDFYGFRNEETGEINIVYRRKEGGYGLIIPKED 290
[31][TOP]
>UniRef100_C9EFD1 Chloroplast ribosomal protein (Fragment) n=1 Tax=Solanum tuberosum
RepID=C9EFD1_SOLTU
Length = 280
Score = 67.0 bits (162), Expect = 6e-10
Identities = 30/59 (50%), Positives = 43/59 (72%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEED 92
EVV++K F MPP S+ +A+ L+ +DHD Y +RN++T EIN+VY+R G G I P+ED
Sbjct: 205 EVVRKKSFDMPPLSVNEAIEQLENVDHDFYGFRNEETGEINIVYRRKEGGYGLIIPKED 263
[32][TOP]
>UniRef100_A0ZCI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Nodularia spumigena CCY9414 RepID=A0ZCI5_NODSP
Length = 213
Score = 66.6 bits (161), Expect = 8e-10
Identities = 28/59 (47%), Positives = 42/59 (71%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEED 92
EVV+ K F+MPP ++ +A L+++ HD Y++ N +T EINV+Y+RNH G G IQP +
Sbjct: 132 EVVRTKYFSMPPMTVAEATEQLQLVGHDFYMFHNAETGEINVIYERNHGGYGVIQPRHN 190
[33][TOP]
>UniRef100_Q3AI28 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Synechococcus sp. CC9605 RepID=Q3AI28_SYNSC
Length = 195
Score = 66.2 bits (160), Expect = 1e-09
Identities = 27/56 (48%), Positives = 40/56 (71%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
V+RK F MPP LE+A L ++DHD Y++R K+++++ V+Y+RNH G G IQ E
Sbjct: 140 VRRKYFAMPPMGLEEARRQLDLIDHDFYLFREKESDQLQVIYRRNHGGYGVIQARE 195
[34][TOP]
>UniRef100_B4WNT9 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Synechococcus sp. PCC 7335 RepID=B4WNT9_9SYNE
Length = 224
Score = 66.2 bits (160), Expect = 1e-09
Identities = 27/58 (46%), Positives = 43/58 (74%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEED 92
VV+ K F MPP +++ A+ L+++ HD Y++RN +T EINV+Y+RNH G G +QP ++
Sbjct: 141 VVRSKYFAMPPMTVQTALENLELVGHDFYMFRNVETGEINVIYERNHKGYGLLQPRQN 198
[35][TOP]
>UniRef100_UPI0001794B34 hypothetical protein CLOSPO_00786 n=1 Tax=Clostridium sporogenes
ATCC 15579 RepID=UPI0001794B34
Length = 175
Score = 65.9 bits (159), Expect = 1e-09
Identities = 28/60 (46%), Positives = 42/60 (70%)
Frame = -2
Query: 277 KSQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
K ++VK K F M P S E+AV+ +++L H+ +VY+N DTEE+NV+Y+R G I+PE
Sbjct: 115 KETQIVKTKKFAMKPMSSEEAVLQMELLGHNFFVYQNADTEEVNVIYRRKDGNYGLIEPE 174
[36][TOP]
>UniRef100_Q7NMI0 Glr0786 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NMI0_GLOVI
Length = 187
Score = 65.9 bits (159), Expect = 1e-09
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = -2
Query: 271 QEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
+EVV+ K F MPP S E+A+ L ++DHD +V+RN ++ EINV+Y RNH G G I P
Sbjct: 130 KEVVRTKYFAMPPMSPEEALDHLALVDHDFFVFRNAESGEINVLYARNHGGYGLIVP 186
[37][TOP]
>UniRef100_A7FQJ2 Ribosomal subunit interface protein n=7 Tax=Clostridium botulinum
RepID=A7FQJ2_CLOB1
Length = 175
Score = 65.9 bits (159), Expect = 1e-09
Identities = 28/60 (46%), Positives = 42/60 (70%)
Frame = -2
Query: 277 KSQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
K ++VK K F M P S E+AV+ +++L H+ +VY+N DTEE+NV+Y+R G I+PE
Sbjct: 115 KETQIVKTKKFAMKPMSSEEAVLQMELLGHNFFVYQNADTEEVNVIYRRKDGNYGLIEPE 174
[38][TOP]
>UniRef100_C1FQQ9 Ribosomal subunit interface protein n=2 Tax=Clostridium botulinum
RepID=C1FQQ9_CLOBJ
Length = 175
Score = 65.9 bits (159), Expect = 1e-09
Identities = 28/60 (46%), Positives = 42/60 (70%)
Frame = -2
Query: 277 KSQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
K ++VK K F M P S E+AV+ +++L H+ +VY+N DTEE+NV+Y+R G I+PE
Sbjct: 115 KETQIVKTKKFAMKPMSSEEAVLQMELLGHNFFVYQNADTEEVNVIYRRKDGNYGLIEPE 174
[39][TOP]
>UniRef100_Q2JS19 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
JA-3-3Ab RepID=Q2JS19_SYNJA
Length = 191
Score = 65.5 bits (158), Expect = 2e-09
Identities = 28/56 (50%), Positives = 41/56 (73%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
EVV+ K F MPP ++++A+ L+++DHD YV+RN + EINV+Y R H G G I+P
Sbjct: 134 EVVRTKYFAMPPMTVQEALHQLELVDHDFYVFRNIENGEINVIYVRKHGGYGLIRP 189
[40][TOP]
>UniRef100_A3YVD7 Light repressed protein A-like protein n=1 Tax=Synechococcus sp. WH
5701 RepID=A3YVD7_9SYNE
Length = 195
Score = 65.1 bits (157), Expect = 2e-09
Identities = 28/56 (50%), Positives = 41/56 (73%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
V+RK F+MP SL+ A+ L+++DHD YV+R + + + VVY+RNH G G IQP+E
Sbjct: 139 VRRKYFSMPAMSLDQALHQLELIDHDFYVFREESSGGLQVVYRRNHGGFGVIQPKE 194
[41][TOP]
>UniRef100_B2A816 Sigma 54 modulation protein, SSU ribosomal protein S30P n=1
Tax=Natranaerobius thermophilus JW/NM-WN-LF
RepID=B2A816_NATTJ
Length = 178
Score = 64.7 bits (156), Expect = 3e-09
Identities = 27/60 (45%), Positives = 42/60 (70%)
Frame = -2
Query: 277 KSQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
K E+VK K F + P + E+AV+ ++++ HD +V+RN +TEE+NVVY+R G I+PE
Sbjct: 118 KDPEIVKTKRFAIKPMTPEEAVLQMELIGHDFFVFRNAETEEVNVVYRRKDGNYGQIEPE 177
[42][TOP]
>UniRef100_B9SEK8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative n=1
Tax=Ricinus communis RepID=B9SEK8_RICCO
Length = 311
Score = 64.7 bits (156), Expect = 3e-09
Identities = 29/59 (49%), Positives = 42/59 (71%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEED 92
EVV+ K F MPP ++ +A+ LK +DHD Y +RN++T EIN++YKR G G I P+E+
Sbjct: 232 EVVRTKYFDMPPLTVSEAIEQLKNVDHDFYGFRNEETGEINIIYKRKAGGYGIIIPKEN 290
[43][TOP]
>UniRef100_Q3AZ51 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Synechococcus sp. CC9902 RepID=Q3AZ51_SYNS9
Length = 195
Score = 63.9 bits (154), Expect = 5e-09
Identities = 27/56 (48%), Positives = 40/56 (71%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
V+RK F+MPP +L+DA L ++DHD Y++R+ T ++ V+Y+RNH G G IQ E
Sbjct: 140 VRRKYFSMPPMTLDDARHQLDVIDHDFYLFRDSKTGDLQVIYRRNHGGYGVIQARE 195
[44][TOP]
>UniRef100_C6T7E3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T7E3_SOYBN
Length = 291
Score = 63.5 bits (153), Expect = 7e-09
Identities = 29/59 (49%), Positives = 41/59 (69%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEED 92
EVV+ K F MPP ++ +A+ L+ +DHD Y +RN++T EIN+VYKR G G I P+ D
Sbjct: 212 EVVRTKYFDMPPLTVAEAIEQLENVDHDFYGFRNEETGEINIVYKRKEGGYGLIVPKGD 270
[45][TOP]
>UniRef100_A4CWK2 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 7805
RepID=A4CWK2_SYNPV
Length = 195
Score = 63.2 bits (152), Expect = 9e-09
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQ 104
V+RK F MPP +LE A L ++DHD YV+R+ D+ E+ V+Y RNH G G I+
Sbjct: 140 VRRKYFAMPPMTLEQARQQLDLIDHDFYVFRDSDSGELQVIYHRNHGGYGVIE 192
[46][TOP]
>UniRef100_Q0ICJ8 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
CC9311 RepID=Q0ICJ8_SYNS3
Length = 191
Score = 62.8 bits (151), Expect = 1e-08
Identities = 27/53 (50%), Positives = 39/53 (73%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQ 104
V+RK F MP SLE+A L+++DHD Y++R+K++ E+ V+Y RNH G G IQ
Sbjct: 136 VRRKYFAMPAMSLEEARHQLELIDHDFYLFRDKESGELQVIYHRNHGGFGVIQ 188
[47][TOP]
>UniRef100_A3ZA02 Light repressed protein A-like protein n=1 Tax=Synechococcus sp.
RS9917 RepID=A3ZA02_9SYNE
Length = 195
Score = 62.8 bits (151), Expect = 1e-08
Identities = 27/53 (50%), Positives = 38/53 (71%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQ 104
V+RK F MPP SLE+A L ++DHD Y++R+ T ++ V+Y+RNH G G IQ
Sbjct: 140 VRRKYFAMPPMSLEEARHQLDVIDHDFYLFRDASTGDLQVIYRRNHGGYGVIQ 192
[48][TOP]
>UniRef100_Q9FLV3 Similarity to ribosomal protein 30S subunit n=2 Tax=Arabidopsis
thaliana RepID=Q9FLV3_ARATH
Length = 365
Score = 62.8 bits (151), Expect = 1e-08
Identities = 27/60 (45%), Positives = 43/60 (71%)
Frame = -2
Query: 271 QEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEED 92
+E+V+ K F MPP ++ +AV L+++ HD Y ++N++T EIN+VYKR G G I P++D
Sbjct: 285 KEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEINIVYKRKEGGYGLIIPKKD 344
[49][TOP]
>UniRef100_P19954 30S ribosomal protein 1, chloroplastic n=1 Tax=Spinacia oleracea
RepID=RR30_SPIOL
Length = 302
Score = 62.8 bits (151), Expect = 1e-08
Identities = 27/59 (45%), Positives = 42/59 (71%)
Frame = -2
Query: 271 QEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
+EVV+ K F MPP ++ +AV L+ +DHD Y +RN++T +IN++YKR G G I P++
Sbjct: 223 EEVVRTKYFDMPPLTITEAVEQLENVDHDFYAFRNEETGDINILYKRKEGGYGLIIPKD 281
[50][TOP]
>UniRef100_B9I297 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I297_POPTR
Length = 306
Score = 62.4 bits (150), Expect = 2e-08
Identities = 28/61 (45%), Positives = 43/61 (70%)
Frame = -2
Query: 271 QEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEED 92
+EVV+ K F MPP ++ +A+ L+ +DHD Y +RN++T EIN+VYKR G G I P+ +
Sbjct: 226 EEVVRTKFFDMPPLTVSEAIEQLENVDHDFYGFRNEETGEINIVYKRKAGGYGLIIPKGN 285
Query: 91 E 89
+
Sbjct: 286 D 286
[51][TOP]
>UniRef100_UPI00016C04A0 sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Epulopiscium sp. 'N.t. morphotype B'
RepID=UPI00016C04A0
Length = 177
Score = 62.0 bits (149), Expect = 2e-08
Identities = 24/55 (43%), Positives = 41/55 (74%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
++K+K F M P + E+A+M ++++ H+ YVY ++DTE++NVVYKR + G I+P
Sbjct: 121 IIKKKKFAMKPMNAEEAIMQMELVGHNFYVYLDQDTEDVNVVYKRRNSSYGLIEP 175
[52][TOP]
>UniRef100_Q7V8W0 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus
str. MIT 9313 RepID=Q7V8W0_PROMM
Length = 195
Score = 61.6 bits (148), Expect = 3e-08
Identities = 25/56 (44%), Positives = 39/56 (69%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
V+RK F MPP S+E A L ++DHD Y++R +++ ++ V+Y+RNH G G IQ +
Sbjct: 140 VRRKYFAMPPMSVEQARYQLDLIDHDFYLFREQESGQLQVIYRRNHGGYGVIQARD 195
[53][TOP]
>UniRef100_Q31CD8 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Prochlorococcus marinus str. MIT 9312
RepID=Q31CD8_PROM9
Length = 194
Score = 61.2 bits (147), Expect = 3e-08
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQ 104
+K K F M P S E+A L ++DHD YV+RNK E+ V+YKRNH G G IQ
Sbjct: 140 IKNKYFEMNPISSEEARKQLDLIDHDFYVFRNKKNNELQVIYKRNHGGYGLIQ 192
[54][TOP]
>UniRef100_A2CBL6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9303 RepID=A2CBL6_PROM3
Length = 195
Score = 61.2 bits (147), Expect = 3e-08
Identities = 25/56 (44%), Positives = 39/56 (69%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
V+RK F MPP S+E A L ++DHD Y++R +++ ++ V+Y+RNH G G IQ +
Sbjct: 140 VRRKYFAMPPMSVEQARHQLDLIDHDFYLFREQESGQLQVIYRRNHGGYGVIQARD 195
[55][TOP]
>UniRef100_Q05SE1 Putative uncharacterized protein n=1 Tax=Synechococcus sp. RS9916
RepID=Q05SE1_9SYNE
Length = 195
Score = 61.2 bits (147), Expect = 3e-08
Identities = 25/56 (44%), Positives = 40/56 (71%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
V+RK F MPP S+E+A L ++DHD +++R+ ++E+ V+Y+RNH G G IQ +
Sbjct: 140 VRRKYFPMPPMSVEEARHQLDLIDHDFFLFRDASSKELQVIYRRNHGGYGVIQARD 195
[56][TOP]
>UniRef100_C5VNV1 Ribosomal subunit interface protein n=1 Tax=Clostridium botulinum D
str. 1873 RepID=C5VNV1_CLOBO
Length = 178
Score = 61.2 bits (147), Expect = 3e-08
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 6/68 (8%)
Frame = -2
Query: 283 VPKSQE------VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHD 122
+PK E +VK K F + P S E+AV+ +++L H+ +V+RN DT+E+NV+YKR
Sbjct: 110 IPKDAEDNVESKIVKTKKFAVKPMSNEEAVLQMELLGHNFFVFRNSDTDEVNVLYKRKDG 169
Query: 121 GIGHIQPE 98
G I+PE
Sbjct: 170 QYGLIEPE 177
[57][TOP]
>UniRef100_Q7V2R9 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus
subsp. pastoris str. CCMP1986 RepID=Q7V2R9_PROMP
Length = 194
Score = 60.8 bits (146), Expect = 4e-08
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQ 104
+K+K F M P SLE+A L +DHD Y++RNK E+ V+YKRNH G G IQ
Sbjct: 140 IKKKYFEMIPISLEEARKQLDFIDHDFYLFRNKLNNELQVIYKRNHGGYGLIQ 192
[58][TOP]
>UniRef100_A2BV60 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9515 RepID=A2BV60_PROM5
Length = 194
Score = 60.8 bits (146), Expect = 4e-08
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQ 104
+K K F M P SLE+A L ++DHD YV+RNK E+ V+YKR H G G IQ
Sbjct: 140 IKNKYFEMIPISLEEARKQLDLIDHDFYVFRNKKNNELQVIYKRKHGGYGLIQ 192
[59][TOP]
>UniRef100_UPI0001984F94 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001984F94
Length = 298
Score = 60.5 bits (145), Expect = 6e-08
Identities = 27/59 (45%), Positives = 42/59 (71%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEED 92
E+V+ K F MPP ++ +AV L+ +DHD + +RN++T EIN++YKR G G I P+E+
Sbjct: 219 EIVRTKYFDMPPLTVPEAVEQLENVDHDFFGFRNEETGEINILYKRKAGGYGLIIPKEN 277
[60][TOP]
>UniRef100_Q10ZL6 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Trichodesmium erythraeum IMS101 RepID=Q10ZL6_TRIEI
Length = 215
Score = 60.5 bits (145), Expect = 6e-08
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKR-NHDGIGHIQP 101
EVV+ K F MP ++E+A+ L+++DHD Y++ N T EINV+YKR +H G G IQP
Sbjct: 131 EVVRTKYFPMPSMTVEEALEQLQLIDHDFYMFSNGVTGEINVIYKRYHHGGYGLIQP 187
[61][TOP]
>UniRef100_A9BE19 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9211 RepID=A9BE19_PROM4
Length = 197
Score = 60.5 bits (145), Expect = 6e-08
Identities = 23/58 (39%), Positives = 41/58 (70%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEEDE 89
++RK F+MPP S E A L ++DHD Y+++ +T+++ V+Y+R H G G IQ ++++
Sbjct: 140 IRRKYFSMPPMSTEQARHQLDLIDHDFYMFKEIETQQLQVIYRRTHGGYGIIQAKDED 197
[62][TOP]
>UniRef100_A3PBB8 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9301 RepID=A3PBB8_PROM0
Length = 194
Score = 60.5 bits (145), Expect = 6e-08
Identities = 27/53 (50%), Positives = 35/53 (66%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQ 104
+K K F M P S ++A L ++DHD YV+RNK E+ V+YKRNH G G IQ
Sbjct: 140 IKNKYFEMTPISSDEARKQLDLIDHDFYVFRNKKNNELQVIYKRNHGGYGLIQ 192
[63][TOP]
>UniRef100_A2BPM8 Light repressed protein A n=1 Tax=Prochlorococcus marinus str.
AS9601 RepID=A2BPM8_PROMS
Length = 194
Score = 60.5 bits (145), Expect = 6e-08
Identities = 27/53 (50%), Positives = 35/53 (66%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQ 104
+K K F M P S ++A L ++DHD YV+RNK E+ V+YKRNH G G IQ
Sbjct: 140 IKNKYFEMTPISSDEARKQLDLIDHDFYVFRNKKNNELQVIYKRNHGGYGLIQ 192
[64][TOP]
>UniRef100_Q1PKX8 Light repressed protein A-like protein n=1 Tax=uncultured
Prochlorococcus marinus clone ASNC2259
RepID=Q1PKX8_PROMA
Length = 194
Score = 60.5 bits (145), Expect = 6e-08
Identities = 27/53 (50%), Positives = 35/53 (66%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQ 104
+K K F M P S ++A L ++DHD YV+RNK E+ V+YKRNH G G IQ
Sbjct: 140 IKNKYFEMTPISSDEARKQLDLIDHDFYVFRNKKNNELQVIYKRNHGGYGLIQ 192
[65][TOP]
>UniRef100_A7QEV5 Chromosome chr16 scaffold_86, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QEV5_VITVI
Length = 230
Score = 60.5 bits (145), Expect = 6e-08
Identities = 27/59 (45%), Positives = 42/59 (71%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEED 92
E+V+ K F MPP ++ +AV L+ +DHD + +RN++T EIN++YKR G G I P+E+
Sbjct: 151 EIVRTKYFDMPPLTVPEAVEQLENVDHDFFGFRNEETGEINILYKRKAGGYGLIIPKEN 209
[66][TOP]
>UniRef100_Q1PJW9 Light repressed protein A n=1 Tax=uncultured Prochlorococcus
marinus clone HF10-88F10 RepID=Q1PJW9_PROMA
Length = 194
Score = 60.1 bits (144), Expect = 7e-08
Identities = 27/53 (50%), Positives = 35/53 (66%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQ 104
+K K F M P S E+A L ++DHD YV+RNK ++ V+YKRNH G G IQ
Sbjct: 140 IKNKYFEMNPISSEEARKQLDLIDHDFYVFRNKKNNQLQVIYKRNHGGYGLIQ 192
[67][TOP]
>UniRef100_Q063T8 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Synechococcus sp. BL107 RepID=Q063T8_9SYNE
Length = 195
Score = 60.1 bits (144), Expect = 7e-08
Identities = 25/56 (44%), Positives = 39/56 (69%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
V+RK F+MPP +L+DA L ++DHD Y++++ T + V+Y+RNH G G IQ +
Sbjct: 140 VRRKYFSMPPMTLDDARHQLDVIDHDFYLFKDSATGALQVIYRRNHGGYGVIQARD 195
[68][TOP]
>UniRef100_B1B8N8 Ribosomal subunit interface protein n=1 Tax=Clostridium botulinum C
str. Eklund RepID=B1B8N8_CLOBO
Length = 184
Score = 60.1 bits (144), Expect = 7e-08
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 6/68 (8%)
Frame = -2
Query: 283 VPKSQE------VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHD 122
VPK E +VK K F + P S E+AV+ +++L H+ +V+ N DTEE+NV+YKR
Sbjct: 116 VPKDNEDSIESKIVKTKRFAIKPMSKEEAVLQMELLGHNFFVFTNGDTEEVNVLYKRKDG 175
Query: 121 GIGHIQPE 98
G I+PE
Sbjct: 176 QYGLIEPE 183
[69][TOP]
>UniRef100_A1HT12 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Thermosinus carboxydivorans Nor1 RepID=A1HT12_9FIRM
Length = 174
Score = 60.1 bits (144), Expect = 7e-08
Identities = 24/56 (42%), Positives = 39/56 (69%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
VVK K F + P +E+A+M + +++HD YV+ N +TE++NV+Y+R G I+PE
Sbjct: 118 VVKTKRFPVKPMDVEEAIMQMNLINHDFYVFMNAETEQVNVIYRRKDGNYGLIEPE 173
[70][TOP]
>UniRef100_Q84M68 Os03g0856500 protein n=3 Tax=Oryza sativa RepID=Q84M68_ORYSJ
Length = 309
Score = 60.1 bits (144), Expect = 7e-08
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEED 92
+VV+ KVF MPP S+E+A+ L +DH+ Y +R++ T E+NV+YKR G G I P+ D
Sbjct: 231 KVVRTKVFEMPPLSVEEAMEQLVNVDHNFYAFRDEKTGEMNVLYKRKEGGFGLIVPKGD 289
[71][TOP]
>UniRef100_B8BRE6 Light-repressed protein a n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8BRE6_THAPS
Length = 198
Score = 60.1 bits (144), Expect = 7e-08
Identities = 24/47 (51%), Positives = 37/47 (78%)
Frame = -2
Query: 235 PQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
P S+++A+ L +DHD YV+R+++T E++VVYKRN G+G IQPE+
Sbjct: 152 PISIKEAIFALDYIDHDFYVFRDEETNEVSVVYKRNAGGVGLIQPEQ 198
[72][TOP]
>UniRef100_B7GE66 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
RepID=B7GE66_PHATR
Length = 209
Score = 60.1 bits (144), Expect = 7e-08
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = -2
Query: 280 PKSQEVVKRKVFTMP-PQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQ 104
P++ + K K F + P S+++AV L +DHD YV+RN +T EI+VVYKR+ GIG ++
Sbjct: 149 PEAPTITKVKNFDLTKPMSVQEAVFALDYIDHDFYVFRNAETNEISVVYKRHVGGIGLVE 208
Query: 103 P 101
P
Sbjct: 209 P 209
[73][TOP]
>UniRef100_UPI00017F5F53 putative RNA-binding protein n=1 Tax=Clostridium difficile
QCD-23m63 RepID=UPI00017F5F53
Length = 183
Score = 59.7 bits (143), Expect = 1e-07
Identities = 28/62 (45%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
Frame = -2
Query: 277 KSQEVV--KRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQ 104
++QE+V +RK F++ P S E+AV+ ++++ HD Y+++N D++EI VVYKRN+ G G I+
Sbjct: 122 ENQELVIQRRKKFSVKPMSEEEAVLQMELIGHDFYMFKNIDSDEIAVVYKRNNGGYGIIE 181
Query: 103 PE 98
E
Sbjct: 182 HE 183
[74][TOP]
>UniRef100_UPI00016C5D7E putative RNA-binding protein n=1 Tax=Clostridium difficile
QCD-37x79 RepID=UPI00016C5D7E
Length = 117
Score = 59.7 bits (143), Expect = 1e-07
Identities = 28/62 (45%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
Frame = -2
Query: 277 KSQEVV--KRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQ 104
++QE+V +RK F++ P S E+AV+ ++++ HD Y+++N D++EI VVYKRN+ G G I+
Sbjct: 56 ENQELVIQRRKKFSVKPMSEEEAVLQMELIGHDFYMFKNIDSDEIAVVYKRNNGGYGIIE 115
Query: 103 PE 98
E
Sbjct: 116 HE 117
[75][TOP]
>UniRef100_C9XIR4 Putative RNA-binding protein n=3 Tax=Clostridium difficile
RepID=C9XIR4_CLODI
Length = 183
Score = 59.7 bits (143), Expect = 1e-07
Identities = 28/62 (45%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
Frame = -2
Query: 277 KSQEVV--KRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQ 104
++QE+V +RK F++ P S E+AV+ ++++ HD Y+++N D++EI VVYKRN+ G G I+
Sbjct: 122 ENQELVIQRRKKFSVKPMSEEEAVLQMELIGHDFYMFKNIDSDEIAVVYKRNNGGYGIIE 181
Query: 103 PE 98
E
Sbjct: 182 HE 183
[76][TOP]
>UniRef100_Q1AVJ5 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVJ5_RUBXD
Length = 189
Score = 59.7 bits (143), Expect = 1e-07
Identities = 26/55 (47%), Positives = 38/55 (69%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
+V+ K F M P S E+AV+ +++LDHD +V+ N DT +INVVY+R G I+P
Sbjct: 133 IVRTKQFQMKPMSAEEAVLQMELLDHDFFVFTNADTGDINVVYRRRDGNYGLIEP 187
[77][TOP]
>UniRef100_Q18CN1 Putative RNA-binding protein n=1 Tax=Clostridium difficile 630
RepID=Q18CN1_CLOD6
Length = 183
Score = 59.7 bits (143), Expect = 1e-07
Identities = 28/62 (45%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
Frame = -2
Query: 277 KSQEVV--KRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQ 104
++QE+V +RK F++ P S E+AV+ ++++ HD Y+++N D++EI VVYKRN+ G G I+
Sbjct: 122 ENQELVIQRRKKFSVKPMSEEEAVLQMELIGHDFYMFKNIDSDEIAVVYKRNNGGYGIIE 181
Query: 103 PE 98
E
Sbjct: 182 HE 183
[78][TOP]
>UniRef100_A5GJ89 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 7803
RepID=A5GJ89_SYNPW
Length = 195
Score = 59.7 bits (143), Expect = 1e-07
Identities = 24/56 (42%), Positives = 39/56 (69%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
V+RK F+MPP +LE A L ++DHD Y++R+ + ++ V+Y+RNH G G I+ +
Sbjct: 140 VRRKYFSMPPMTLEQARQQLDLIDHDFYLFRDSASGDLQVIYRRNHGGYGVIEARD 195
[79][TOP]
>UniRef100_A4J928 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Desulfotomaculum reducens MI-1 RepID=A4J928_DESRM
Length = 173
Score = 59.7 bits (143), Expect = 1e-07
Identities = 24/60 (40%), Positives = 41/60 (68%)
Frame = -2
Query: 277 KSQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
++ +V+K K F + P +L++A+M + +L HD +V+ N +TE+ NV+YKR G I+PE
Sbjct: 113 ETPQVIKTKRFAIKPMALDEAIMQMNLLGHDFFVFSNAETEQTNVIYKRKDGNYGLIEPE 172
[80][TOP]
>UniRef100_A8G3B2 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus str.
MIT 9215 RepID=A8G3B2_PROM2
Length = 194
Score = 59.3 bits (142), Expect = 1e-07
Identities = 27/53 (50%), Positives = 34/53 (64%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQ 104
+K K F M P S E+A L ++DHD YV+RN E+ V+YKRNH G G IQ
Sbjct: 140 IKNKYFEMNPISSEEARKQLDLIDHDFYVFRNNKNNELQVIYKRNHGGYGLIQ 192
[81][TOP]
>UniRef100_B9P0E9 Light repressed protein A n=1 Tax=Prochlorococcus marinus str. MIT
9202 RepID=B9P0E9_PROMA
Length = 194
Score = 59.3 bits (142), Expect = 1e-07
Identities = 27/53 (50%), Positives = 34/53 (64%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQ 104
+K K F M P S E+A L ++DHD YV+RN E+ V+YKRNH G G IQ
Sbjct: 140 IKNKYFEMNPISSEEARKQLDLIDHDFYVFRNSKNNELQVIYKRNHGGYGLIQ 192
[82][TOP]
>UniRef100_A0NI00 Ribosomal subunit interface protein n=1 Tax=Oenococcus oeni ATCC
BAA-1163 RepID=A0NI00_OENOE
Length = 190
Score = 59.3 bits (142), Expect = 1e-07
Identities = 24/63 (38%), Positives = 43/63 (68%)
Frame = -2
Query: 277 KSQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
K +V++RK ++ P +E+AV+ ++MLDHD +++ N DT ++++VYKR+ G I+ E
Sbjct: 125 KKIDVIRRKTLSLKPMDIEEAVLQMEMLDHDFFLFLNSDTNQLDIVYKRDDGKYGLIETE 184
Query: 97 EDE 89
E
Sbjct: 185 NVE 187
[83][TOP]
>UniRef100_B6TYP8 Plastid-specific 30S ribosomal protein 1 n=1 Tax=Zea mays
RepID=B6TYP8_MAIZE
Length = 309
Score = 59.3 bits (142), Expect = 1e-07
Identities = 25/59 (42%), Positives = 42/59 (71%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEED 92
+VV+ KVF MPP ++E+A+ L+ +DHD Y +R++ T ++N++Y+R G G I P+ D
Sbjct: 217 KVVRTKVFEMPPLTVEEALEQLENVDHDFYCFRDEATGQVNILYRRKEGGYGLIIPKND 275
[84][TOP]
>UniRef100_Q97F93 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Clostridium
acetobutylicum RepID=Q97F93_CLOAB
Length = 174
Score = 58.9 bits (141), Expect = 2e-07
Identities = 26/57 (45%), Positives = 40/57 (70%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
E+VK K F + P S E+AV+ +++L H+ +V++N D+ E+NVVYKR G I+PE
Sbjct: 117 EIVKTKRFAIKPMSEEEAVLEMELLGHNFFVFQNGDSNEVNVVYKRKDGNYGLIEPE 173
[85][TOP]
>UniRef100_A0Q2Y0 Ribosomal subunit interface protein n=1 Tax=Clostridium novyi NT
RepID=A0Q2Y0_CLONN
Length = 178
Score = 58.9 bits (141), Expect = 2e-07
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 6/68 (8%)
Frame = -2
Query: 283 VPKSQE------VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHD 122
VPK E +VK K F + P S E+AV+ +++L H+ +V+ N +TEE+NV+YKR
Sbjct: 110 VPKDDEDNIESKIVKTKRFAIKPMSREEAVLQMELLGHNFFVFTNAETEEVNVLYKRKDG 169
Query: 121 GIGHIQPE 98
G I+PE
Sbjct: 170 QYGLIEPE 177
[86][TOP]
>UniRef100_Q3AFQ6 Ribosomal subunit interface protein n=1 Tax=Carboxydothermus
hydrogenoformans Z-2901 RepID=Q3AFQ6_CARHZ
Length = 177
Score = 58.5 bits (140), Expect = 2e-07
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
++VK K F + P S E+A M +++L H +V+ N DT+EINVVYKR G I+PE
Sbjct: 120 KIVKSKRFAIKPMSPEEAAMQMELLGHSFFVFTNADTDEINVVYKRRDGKYGLIEPE 176
[87][TOP]
>UniRef100_Q04E96 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Oenococcus oeni PSU-1 RepID=Q04E96_OENOB
Length = 190
Score = 58.2 bits (139), Expect = 3e-07
Identities = 24/63 (38%), Positives = 43/63 (68%)
Frame = -2
Query: 277 KSQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
K +V++RK ++ P +E+AV+ ++MLDHD +++ N DT ++++VYKR+ G I+ E
Sbjct: 125 KKIDVIRRKNLSLKPMDIEEAVLQMEMLDHDFFLFLNSDTNQLDIVYKRDDGKYGLIETE 184
Query: 97 EDE 89
E
Sbjct: 185 NVE 187
[88][TOP]
>UniRef100_B9MLV8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Anaerocellum thermophilum DSM 6725
RepID=B9MLV8_ANATD
Length = 181
Score = 58.2 bits (139), Expect = 3e-07
Identities = 23/56 (41%), Positives = 40/56 (71%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+ K K F + P S+E+A++ + +L H+ +V+ N+DT+++NVVY+RN G I+PE
Sbjct: 125 IAKTKRFPIKPMSVEEAILQMNLLGHNFFVFLNQDTDKVNVVYRRNDGAYGLIEPE 180
[89][TOP]
>UniRef100_B8FYZ1 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Desulfitobacterium hafniense RepID=B8FYZ1_DESHD
Length = 175
Score = 58.2 bits (139), Expect = 3e-07
Identities = 25/60 (41%), Positives = 39/60 (65%)
Frame = -2
Query: 274 SQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
S+EVV+ K F P S+E+A+M + ++ H+ Y + N DT INVVY+R G ++PE+
Sbjct: 116 SEEVVRHKKFGTKPMSVEEAIMQMNLVGHNFYAFTNMDTNVINVVYRRRSGDYGLLEPED 175
[90][TOP]
>UniRef100_A4XJ41 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Caldicellulosiruptor saccharolyticus DSM 8903
RepID=A4XJ41_CALS8
Length = 182
Score = 58.2 bits (139), Expect = 3e-07
Identities = 23/57 (40%), Positives = 40/57 (70%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
++ K K F + P S+++A++ + +L H +V+ N+DT+++NVVYKRN G I+PE
Sbjct: 125 KIAKTKRFPIKPMSVDEAILQMNLLGHSFFVFLNQDTDKVNVVYKRNDGAYGLIEPE 181
[91][TOP]
>UniRef100_C6J2M0 Ribosomal subunit interface protein n=1 Tax=Paenibacillus sp. oral
taxon 786 str. D14 RepID=C6J2M0_9BACL
Length = 183
Score = 58.2 bits (139), Expect = 3e-07
Identities = 25/57 (43%), Positives = 40/57 (70%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
EVV+ K FT+ P +E+A++ + M+ H+ +V+ N DT+E+NVVYKRN G I+ +
Sbjct: 127 EVVRTKRFTLKPMDVEEAILQMNMVGHNFFVFSNIDTKEVNVVYKRNDGKYGLIEQD 183
[92][TOP]
>UniRef100_C5RGA6 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Clostridium cellulovorans 743B RepID=C5RGA6_CLOCL
Length = 180
Score = 58.2 bits (139), Expect = 3e-07
Identities = 25/64 (39%), Positives = 42/64 (65%)
Frame = -2
Query: 283 VPKSQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQ 104
V + ++VK K F + P + E+AV+ +++L H+ +V+ + +T E+NVVYKR G I+
Sbjct: 117 VEEESKIVKTKRFAIKPMNAEEAVLQMELLGHNFFVFMDDETSEVNVVYKRKDGNFGLIE 176
Query: 103 PEED 92
PE D
Sbjct: 177 PEFD 180
[93][TOP]
>UniRef100_A6TLE5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Alkaliphilus metalliredigens QYMF RepID=A6TLE5_ALKMQ
Length = 177
Score = 57.8 bits (138), Expect = 4e-07
Identities = 24/57 (42%), Positives = 39/57 (68%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
++VK K F M P E+AV+ ++++ H+ Y++ N +T+E+NVVYKR G I+PE
Sbjct: 120 KIVKTKRFAMKPMHSEEAVLQMELIGHNFYMFANAETDEVNVVYKRKDGNYGLIEPE 176
[94][TOP]
>UniRef100_C4G2X0 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC
49176 RepID=C4G2X0_ABIDE
Length = 175
Score = 57.8 bits (138), Expect = 4e-07
Identities = 24/57 (42%), Positives = 40/57 (70%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+V++ K F + P E+A + +++L+H YV+RN +T+E+NVVYKR + G I+PE
Sbjct: 118 KVIRTKRFAVKPMDPEEACVQMELLNHSFYVFRNAETDEVNVVYKRKNGDYGLIEPE 174
[95][TOP]
>UniRef100_C1XVX9 SSU ribosomal protein S30P; sigma 54 modulation protein n=1
Tax=Meiothermus silvanus DSM 9946 RepID=C1XVX9_9DEIN
Length = 184
Score = 57.8 bits (138), Expect = 4e-07
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
++V+ K F M P S EDA ++ L HD +V+RN +TE+INV+Y+R G I+P
Sbjct: 127 QIVRTKRFAMKPMSPEDAAFEMEALGHDFFVFRNAETEDINVIYRRRDGNYGLIEP 182
[96][TOP]
>UniRef100_B0P2P9 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1
RepID=B0P2P9_9CLOT
Length = 179
Score = 57.8 bits (138), Expect = 4e-07
Identities = 24/56 (42%), Positives = 39/56 (69%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+++ K F + P +E+A + +++L HD +V+RN DT E+NVVYKR + G I+PE
Sbjct: 123 IIRSKKFAIKPMDVEEACVQMELLGHDFFVFRNADTFEVNVVYKRKGNTYGLIEPE 178
[97][TOP]
>UniRef100_UPI0001789185 sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789185
Length = 188
Score = 57.4 bits (137), Expect = 5e-07
Identities = 25/55 (45%), Positives = 39/55 (70%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQ 104
EVV+ K FTM P +E+A++ + M+ H+ +V+ N DT+E+NVVYKR+ G I+
Sbjct: 132 EVVRTKRFTMKPMDVEEAILQMNMVGHNFFVFSNIDTQEVNVVYKRDDGKYGLIE 186
[98][TOP]
>UniRef100_Q46H11 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Prochlorococcus marinus str. NATL2A
RepID=Q46H11_PROMT
Length = 194
Score = 57.4 bits (137), Expect = 5e-07
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQ 104
V+RK F M P ++E A + L ++DHD Y++R ++ + V+YKRNH G G IQ
Sbjct: 139 VRRKYFEMTPMNIEQARVQLDLIDHDFYLFREEEGSALRVIYKRNHGGYGVIQ 191
[99][TOP]
>UniRef100_C6Q3Y9 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Thermoanaerobacter mathranii subsp. mathranii str.
A3 RepID=C6Q3Y9_9THEO
Length = 181
Score = 57.4 bits (137), Expect = 5e-07
Identities = 27/60 (45%), Positives = 39/60 (65%)
Frame = -2
Query: 274 SQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
S E+VK K F + P S E+A++ + +L H+ +V+ N DT+ INVVYKR G I+P E
Sbjct: 122 SFEIVKTKRFPIKPMSAEEAILQMNLLGHNFFVFTNADTDTINVVYKRKDGKYGLIEPIE 181
[100][TOP]
>UniRef100_C6PFL3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Thermoanaerobacter italicus Ab9 RepID=C6PFL3_9THEO
Length = 181
Score = 57.4 bits (137), Expect = 5e-07
Identities = 27/60 (45%), Positives = 39/60 (65%)
Frame = -2
Query: 274 SQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
S E+VK K F + P S E+A++ + +L H+ +V+ N DT+ INVVYKR G I+P E
Sbjct: 122 SFEIVKTKRFPIKPMSAEEAILQMNLLGHNFFVFTNADTDTINVVYKRKDGKYGLIEPIE 181
[101][TOP]
>UniRef100_A7VDW4 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50
RepID=A7VDW4_9CLOT
Length = 170
Score = 57.4 bits (137), Expect = 5e-07
Identities = 26/57 (45%), Positives = 39/57 (68%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
++V+ K F + P EDA + + +L H+ YV+RN +TEE+NVVYKR + G I+PE
Sbjct: 113 KIVRCKKFAVKPMYPEDACIQMDLLGHNFYVFRNAETEEVNVVYKRKGNTYGLIEPE 169
[102][TOP]
>UniRef100_UPI0001694CB6 ribosomal subunit interface protein n=1 Tax=Paenibacillus larvae
subsp. larvae BRL-230010 RepID=UPI0001694CB6
Length = 182
Score = 57.0 bits (136), Expect = 6e-07
Identities = 23/56 (41%), Positives = 39/56 (69%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
E+V+ K FT+ P +E+A++ + M+ H+ +V+ N DT+++NVVYKR G I+P
Sbjct: 125 ELVRTKRFTLKPMDVEEAILQMNMVGHNFFVFANMDTDQVNVVYKREDGRYGLIEP 180
[103][TOP]
>UniRef100_Q8RCC0 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Thermoanaerobacter
tengcongensis RepID=Q8RCC0_THETN
Length = 184
Score = 57.0 bits (136), Expect = 6e-07
Identities = 27/62 (43%), Positives = 40/62 (64%)
Frame = -2
Query: 274 SQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
S E+VK K F + P S E+A++ + +L H +V+ N +T+ INVVYKR G I+P E
Sbjct: 123 SFEIVKTKRFPIKPMSPEEAILQMNLLGHTFFVFTNAETDMINVVYKRKDGKYGLIEPVE 182
Query: 94 DE 89
+E
Sbjct: 183 EE 184
[104][TOP]
>UniRef100_B8CYM6 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Halothermothrix orenii H 168 RepID=B8CYM6_HALOH
Length = 184
Score = 57.0 bits (136), Expect = 6e-07
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
+V+ K F + P S+E+A M + +L HD +V+ N +TE++NVVYKR G I+P
Sbjct: 128 IVRTKKFAIKPMSVEEAAMQMDLLGHDFFVFTNANTEQVNVVYKRKDGNYGLIEP 182
[105][TOP]
>UniRef100_A9KS11 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Clostridium phytofermentans ISDg RepID=A9KS11_CLOPH
Length = 178
Score = 57.0 bits (136), Expect = 6e-07
Identities = 24/56 (42%), Positives = 38/56 (67%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+ + K F M P E+A + +++L H+ YV+RN +T+E+NVVYKR + G I+PE
Sbjct: 122 ITRVKRFAMKPMDAEEACVQMELLGHNFYVFRNAETDEVNVVYKRKGNSYGLIEPE 177
[106][TOP]
>UniRef100_C6Q126 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Clostridium carboxidivorans P7 RepID=C6Q126_9CLOT
Length = 175
Score = 57.0 bits (136), Expect = 6e-07
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Frame = -2
Query: 280 PKSQE---VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGH 110
PK +E +VK K F + P S E+AV+ +++L H+ +VY++ + E+NVVYKR G
Sbjct: 111 PKDKEESKIVKTKRFAIKPMSSEEAVLQMELLGHNFFVYKDAENGEVNVVYKRKDGNYGL 170
Query: 109 IQPE 98
I+PE
Sbjct: 171 IEPE 174
[107][TOP]
>UniRef100_C6MPU4 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacter sp. M18 RepID=C6MPU4_9DELT
Length = 182
Score = 57.0 bits (136), Expect = 6e-07
Identities = 27/56 (48%), Positives = 35/56 (62%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
++K K FTM P S+E+AVM +++L D VY TE INVVY+R G I PE
Sbjct: 125 IIKTKSFTMKPMSVEEAVMQMELLHKDFLVYTESSTETINVVYRRKDGNYGLISPE 180
[108][TOP]
>UniRef100_C4FR72 Putative uncharacterized protein n=1 Tax=Veillonella dispar ATCC
17748 RepID=C4FR72_9FIRM
Length = 175
Score = 57.0 bits (136), Expect = 6e-07
Identities = 27/58 (46%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGI-GHIQPE 98
EVVKRK F + P +E+A++ + ++ HD +++ N +TE +NVVY+R HDG G I+PE
Sbjct: 117 EVVKRKHFAVRPMDVEEAILQMNLIGHDFFMFFNAETEAMNVVYRR-HDGFYGLIEPE 173
[109][TOP]
>UniRef100_C2AWR2 Sigma 54 modulation protein; SSU ribosomal protein S30P n=1
Tax=Veillonella parvula DSM 2008 RepID=C2AWR2_9FIRM
Length = 175
Score = 57.0 bits (136), Expect = 6e-07
Identities = 27/58 (46%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGI-GHIQPE 98
EVVKRK F + P +E+A++ + ++ HD +++ N +TE +NVVY+R HDG G I+PE
Sbjct: 117 EVVKRKHFVVRPMDVEEAILQMNLIGHDFFMFFNAETEAMNVVYRR-HDGFYGLIEPE 173
[110][TOP]
>UniRef100_C0FTS3 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans
DSM 16841 RepID=C0FTS3_9FIRM
Length = 176
Score = 57.0 bits (136), Expect = 6e-07
Identities = 25/57 (43%), Positives = 39/57 (68%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
++++ K F M P EDA + +++L HD YV+ N +TE++NVVYKR + G I+PE
Sbjct: 119 KIIRTKKFDMKPMYPEDACVEMELLGHDFYVFINAETEDVNVVYKRKGNTYGLIEPE 175
[111][TOP]
>UniRef100_A8SVF0 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC
27759 RepID=A8SVF0_9FIRM
Length = 175
Score = 57.0 bits (136), Expect = 6e-07
Identities = 25/57 (43%), Positives = 39/57 (68%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
++V+ K F + P EDA + + +L H+ YV+RN +T+E+NVVYKR + G I+PE
Sbjct: 118 KIVRTKKFAVKPMYPEDACIQMDLLGHNFYVFRNAETDEVNVVYKRKGNTYGLIEPE 174
[112][TOP]
>UniRef100_A8S366 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC
BAA-613 RepID=A8S366_9CLOT
Length = 187
Score = 57.0 bits (136), Expect = 6e-07
Identities = 25/57 (43%), Positives = 39/57 (68%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
++VK K F + P E+A + ++ML H+ YV+ N DT+++NVVYKR + G I+PE
Sbjct: 130 QIVKTKKFAIKPTIPEEACLQMEMLGHNFYVFLNADTDQVNVVYKRKNGTYGLIEPE 186
[113][TOP]
>UniRef100_B9IDE9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IDE9_POPTR
Length = 231
Score = 57.0 bits (136), Expect = 6e-07
Identities = 25/58 (43%), Positives = 40/58 (68%)
Frame = -2
Query: 271 QEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+EVV+ K F MPP ++ +A+ L+ + HD Y +R+++T EIN++YKR G G I P+
Sbjct: 151 EEVVRTKYFDMPPLTVSEAIEQLEHVHHDFYGFRDEETGEINIIYKRKAGGYGLIIPK 208
[114][TOP]
>UniRef100_A9PHY3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=A9PHY3_POPTR
Length = 306
Score = 57.0 bits (136), Expect = 6e-07
Identities = 25/58 (43%), Positives = 40/58 (68%)
Frame = -2
Query: 271 QEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+EVV+ K F MPP ++ +A+ L+ + HD Y +R+++T EIN++YKR G G I P+
Sbjct: 226 EEVVRTKYFDMPPLTVSEAIEQLEHVHHDFYGFRDEETGEINIIYKRKAGGYGLIIPK 283
[115][TOP]
>UniRef100_Q898W3 SSU ribosomal protein S30P n=1 Tax=Clostridium tetani
RepID=Q898W3_CLOTE
Length = 176
Score = 56.6 bits (135), Expect = 8e-07
Identities = 24/60 (40%), Positives = 40/60 (66%)
Frame = -2
Query: 277 KSQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+ ++VK K F + P S E+AV+ ++++ H+ +V+ + DT E+NVVYKR G I+PE
Sbjct: 116 EESKIVKTKRFAIKPMSSEEAVLQMELIGHNFFVFESADTGEVNVVYKRKDGNYGLIEPE 175
[116][TOP]
>UniRef100_Q0SR10 Ribosomal subunit interface protein n=1 Tax=Clostridium perfringens
SM101 RepID=Q0SR10_CLOPS
Length = 179
Score = 56.6 bits (135), Expect = 8e-07
Identities = 24/63 (38%), Positives = 41/63 (65%)
Frame = -2
Query: 277 KSQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
K ++VK K F + P E+AV+ ++++ HD +V+++ +T ++NVVYKR G I+P
Sbjct: 116 KEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVFQDPETNQLNVVYKRKDGNYGLIEPG 175
Query: 97 EDE 89
DE
Sbjct: 176 LDE 178
[117][TOP]
>UniRef100_C8WT44 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446 RepID=C8WT44_ALIAC
Length = 180
Score = 56.6 bits (135), Expect = 8e-07
Identities = 24/57 (42%), Positives = 40/57 (70%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+VV+ K F + P +E+AV+ +++L HD +V+ N +TEE+NVVY+R G I+P+
Sbjct: 123 KVVRVKRFPIKPMDVEEAVLQMELLGHDFFVFMNAETEEVNVVYRRRSGDYGLIEPQ 179
[118][TOP]
>UniRef100_B0KBV4 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Thermoanaerobacter RepID=B0KBV4_THEP3
Length = 181
Score = 56.6 bits (135), Expect = 8e-07
Identities = 27/60 (45%), Positives = 39/60 (65%)
Frame = -2
Query: 274 SQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
S E+VK K F + P S E+A++ + +L H+ +V+ N DT+ INVVYKR G I+P E
Sbjct: 122 SFEIVKTKRFPIKPMSPEEAILQMNLLGHNFFVFTNADTDTINVVYKRKDGKYGLIEPLE 181
[119][TOP]
>UniRef100_B0K3A9 Sigma 54 modulation protein/ribosomal protein S30EA n=3
Tax=Thermoanaerobacter RepID=B0K3A9_THEPX
Length = 181
Score = 56.6 bits (135), Expect = 8e-07
Identities = 27/60 (45%), Positives = 39/60 (65%)
Frame = -2
Query: 274 SQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
S E+VK K F + P S E+A++ + +L H+ +V+ N DT+ INVVYKR G I+P E
Sbjct: 122 SFEIVKTKRFPIKPMSPEEAILQMNLLGHNFFVFTNADTDTINVVYKRKDGKYGLIEPIE 181
[120][TOP]
>UniRef100_C5EVT1 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium
1_7_47FAA RepID=C5EVT1_9FIRM
Length = 187
Score = 56.6 bits (135), Expect = 8e-07
Identities = 25/57 (43%), Positives = 38/57 (66%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
++VK K F + P E+A + ++ML H YV+ N DT+++NVVYKR + G I+PE
Sbjct: 130 QIVKTKKFAIKPTIPEEACLQMEMLGHSFYVFLNADTDQVNVVYKRKNGTYGLIEPE 186
[121][TOP]
>UniRef100_C1XLG1 Sigma 54 modulation protein; SSU ribosomal protein S30P n=1
Tax=Meiothermus ruber DSM 1279 RepID=C1XLG1_MEIRU
Length = 183
Score = 56.6 bits (135), Expect = 8e-07
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
+V+ K F M P + EDA ++ L HD +V+RN DTE+INV+Y+R G I+P
Sbjct: 127 IVRTKRFHMKPMTPEDAAFEMEALGHDFFVFRNADTEQINVIYRRRDGNYGLIEP 181
[122][TOP]
>UniRef100_C0CVD1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme
DSM 15981 RepID=C0CVD1_9CLOT
Length = 176
Score = 56.6 bits (135), Expect = 8e-07
Identities = 25/56 (44%), Positives = 38/56 (67%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+VK K F + P E+A + ++ML H+ YV+ N DT+++NVVYKR + G I+PE
Sbjct: 120 IVKTKKFAIKPTIPEEACLQMEMLGHNFYVFLNSDTDQVNVVYKRKNGTYGLIEPE 175
[123][TOP]
>UniRef100_B7DUH5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Alicyclobacillus acidocaldarius LAA1
RepID=B7DUH5_9BACL
Length = 180
Score = 56.6 bits (135), Expect = 8e-07
Identities = 24/57 (42%), Positives = 40/57 (70%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+VV+ K F + P +E+AV+ +++L HD +V+ N +TEE+NVVY+R G I+P+
Sbjct: 123 KVVRVKRFPIKPMDVEEAVLQMELLGHDFFVFMNAETEEVNVVYRRRSGDYGLIEPQ 179
[124][TOP]
>UniRef100_B6FVY1 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
13275 RepID=B6FVY1_9CLOT
Length = 194
Score = 56.6 bits (135), Expect = 8e-07
Identities = 24/57 (42%), Positives = 40/57 (70%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
+ +RK + P S E+AV+ ++++ HD Y++RN +T+EI +VYKR + G G I+ EE
Sbjct: 137 IKRRKRINIKPMSEEEAVLQMELVGHDFYIFRNDETDEIALVYKRKNGGYGIIEQEE 193
[125][TOP]
>UniRef100_C6E4W8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacter sp. M21 RepID=C6E4W8_GEOSM
Length = 182
Score = 56.2 bits (134), Expect = 1e-06
Identities = 26/56 (46%), Positives = 36/56 (64%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
++K K F+M P S+E+AVM +++L D VY TE+INVVY+R G I PE
Sbjct: 125 IIKTKSFSMKPMSVEEAVMQMELLHKDFLVYTESSTEKINVVYRRKDGNYGLISPE 180
[126][TOP]
>UniRef100_B5EEZ7 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacter bemidjiensis Bem RepID=B5EEZ7_GEOBB
Length = 182
Score = 56.2 bits (134), Expect = 1e-06
Identities = 26/56 (46%), Positives = 36/56 (64%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
++K K F+M P S+E+AVM +++L D VY TE+INVVY+R G I PE
Sbjct: 125 IIKTKSFSMKPMSVEEAVMQMELLHKDFLVYTESSTEKINVVYRRKDGNYGLISPE 180
[127][TOP]
>UniRef100_A2C0K6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. NATL1A RepID=A2C0K6_PROM1
Length = 194
Score = 56.2 bits (134), Expect = 1e-06
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = -2
Query: 262 VKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQ 104
V+RK F M P ++E A + L ++DHD Y++R ++ + V+Y+RNH G G IQ
Sbjct: 139 VRRKYFEMDPMTIEQARVQLDLIDHDFYLFREEEGSALRVIYRRNHGGYGVIQ 191
[128][TOP]
>UniRef100_C7IPR2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Thermoanaerobacter ethanolicus CCSD1
RepID=C7IPR2_THEET
Length = 181
Score = 56.2 bits (134), Expect = 1e-06
Identities = 27/60 (45%), Positives = 38/60 (63%)
Frame = -2
Query: 274 SQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
S E+VK K F + P S E+A++ + +L H +V+ N DT+ INVVYKR G I+P E
Sbjct: 122 SFEIVKTKRFPIKPMSPEEAILQMNLLGHSFFVFTNADTDTINVVYKRKDGKYGLIEPIE 181
[129][TOP]
>UniRef100_C0BAM2 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC
27758 RepID=C0BAM2_9FIRM
Length = 189
Score = 56.2 bits (134), Expect = 1e-06
Identities = 25/57 (43%), Positives = 39/57 (68%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
E+V+ K F + P EDA + +++L H+ YV+ N +T+E+NVVYKR + G I+PE
Sbjct: 131 EIVRTKRFGIKPMFPEDACIQMELLGHNFYVFSNAETDEVNVVYKRKNGTYGLIEPE 187
[130][TOP]
>UniRef100_A9TA00 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9TA00_PHYPA
Length = 297
Score = 56.2 bits (134), Expect = 1e-06
Identities = 27/60 (45%), Positives = 36/60 (60%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEEDE 89
EVV+ K F M P +A+ L + HD Y +RN ++ EIN++YKR H G G I P DE
Sbjct: 226 EVVRTKYFEMRPMKPLEALEQLVNVGHDFYAFRNVESGEINILYKRTHGGYGIIVPRNDE 285
[131][TOP]
>UniRef100_Q0B0B5 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen
RepID=Q0B0B5_SYNWW
Length = 181
Score = 55.8 bits (133), Expect = 1e-06
Identities = 24/59 (40%), Positives = 38/59 (64%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEED 92
+VV+ K F + P +E+A+M + +L H +V+ N +EE+NVVYKR G I+P+ D
Sbjct: 123 KVVRSKRFALKPMDVEEAIMQMNLLGHSFFVFFNPQSEEVNVVYKRKDGNYGLIEPDFD 181
[132][TOP]
>UniRef100_B8E0U8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E0U8_DICTD
Length = 179
Score = 55.8 bits (133), Expect = 1e-06
Identities = 25/59 (42%), Positives = 40/59 (67%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEED 92
EVVK K F + P LE+A++ +++L HD +++R+ +T++I VVYKR G I EE+
Sbjct: 121 EVVKVKRFLLKPMDLEEAILQMELLGHDFFIFRDAETDKIEVVYKRKDGKYGLIVSEEE 179
[133][TOP]
>UniRef100_C7G8P2 Ribosomal subunit interface protein n=1 Tax=Roseburia intestinalis
L1-82 RepID=C7G8P2_9FIRM
Length = 176
Score = 55.8 bits (133), Expect = 1e-06
Identities = 24/57 (42%), Positives = 39/57 (68%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
++++ K F M P EDA + +++L HD +V+ N +TE++NVVYKR + G I+PE
Sbjct: 119 KIIRSKKFDMKPMYPEDACVQMELLGHDFFVFINAETEDVNVVYKRKGNTYGLIEPE 175
[134][TOP]
>UniRef100_B0A7Y1 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM
16795 RepID=B0A7Y1_9CLOT
Length = 187
Score = 55.8 bits (133), Expect = 1e-06
Identities = 24/56 (42%), Positives = 39/56 (69%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+ + K F M P S E+AV+ ++++ HD Y++RN DT+EI++VY+R G G I+ E
Sbjct: 132 IERHKKFDMKPMSPEEAVLQMELVGHDFYMFRNIDTDEISIVYRRETGGYGLIEHE 187
[135][TOP]
>UniRef100_C5WRX8 Putative uncharacterized protein Sb01g000590 n=1 Tax=Sorghum
bicolor RepID=C5WRX8_SORBI
Length = 310
Score = 55.8 bits (133), Expect = 1e-06
Identities = 24/59 (40%), Positives = 41/59 (69%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEED 92
+VV+ KVF MPP ++E+A+ L + H+ Y +R++ T ++N++Y+R G G I P+ED
Sbjct: 219 KVVRTKVFEMPPLTVEEALEQLDNVGHNFYCFRDEATGQVNILYRRKEGGYGLIIPKED 277
[136][TOP]
>UniRef100_C4V4X1 Ribosome-associated inhibitor A n=1 Tax=Selenomonas flueggei ATCC
43531 RepID=C4V4X1_9FIRM
Length = 181
Score = 55.5 bits (132), Expect = 2e-06
Identities = 25/58 (43%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
Frame = -2
Query: 283 VPKSQE---VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDG 119
+P+ E VVK K FT+ P +++A+M + +L+H +V+RN ++EE+N+VY R HDG
Sbjct: 115 IPEEDELYPVVKTKRFTLQPMDVQEAIMQMNLLNHHFFVFRNAESEEVNIVYGR-HDG 171
[137][TOP]
>UniRef100_C4Z2Z4 Putative sigma-54 modulation protein n=1 Tax=Eubacterium eligens
ATCC 27750 RepID=C4Z2Z4_EUBE2
Length = 175
Score = 55.1 bits (131), Expect = 2e-06
Identities = 24/59 (40%), Positives = 40/59 (67%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEED 92
++++ K F + P E+A + +++L H+ YV+ N +TEE+NVVYKR + G I+PE D
Sbjct: 117 KIIRTKRFGIKPMDPEEACVQMELLGHNFYVFFNSETEEVNVVYKRKGNTYGLIEPELD 175
[138][TOP]
>UniRef100_A5N3B3 Predicted ribosome-associated protein n=2 Tax=Clostridium kluyveri
RepID=A5N3B3_CLOK5
Length = 175
Score = 55.1 bits (131), Expect = 2e-06
Identities = 23/60 (38%), Positives = 39/60 (65%)
Frame = -2
Query: 277 KSQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+ ++VK K F + P S E+AV+ +++L H +VYR+ + ++NV+YKR G I+PE
Sbjct: 115 QEHKIVKTKRFAVKPMSSEEAVLQMELLGHSFFVYRDAEQGDVNVIYKRRDGNYGLIEPE 174
[139][TOP]
>UniRef100_C9RBI8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Ammonifex degensii KC4 RepID=C9RBI8_9THEO
Length = 177
Score = 55.1 bits (131), Expect = 2e-06
Identities = 23/56 (41%), Positives = 38/56 (67%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
VVK K F P S+++A++ + +L H+ +V+ N +TE++NVVY+R G I+PE
Sbjct: 121 VVKVKRFAWKPMSIKEAILQMNLLGHNFFVFTNAETEQVNVVYRRKDGNYGLIEPE 176
[140][TOP]
>UniRef100_C8VY36 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Desulfotomaculum acetoxidans DSM 771
RepID=C8VY36_9FIRM
Length = 177
Score = 55.1 bits (131), Expect = 2e-06
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
++++ K F M P S+E+AV+ + +L H +V+ N D++ NVVYKR G I+PE
Sbjct: 120 KILRNKRFNMKPMSVEEAVLQMNLLGHSFFVFSNADSDRANVVYKRKDGNYGLIEPE 176
[141][TOP]
>UniRef100_C0GF81 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GF81_9FIRM
Length = 177
Score = 55.1 bits (131), Expect = 2e-06
Identities = 22/56 (39%), Positives = 37/56 (66%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
+VVK K F + P +E+A++ + +L HD +V+ N D E++NV+Y+R G I+P
Sbjct: 119 DVVKTKRFVVKPMPVEEAILQMNLLGHDFFVFMNADNEDVNVIYRRKDGKYGLIEP 174
[142][TOP]
>UniRef100_B0MPR7 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM
15702 RepID=B0MPR7_9FIRM
Length = 211
Score = 55.1 bits (131), Expect = 2e-06
Identities = 24/58 (41%), Positives = 38/58 (65%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
EVVK K F + P S ++A++ + ML+H +++RN T EINVVY+R+ ++P E
Sbjct: 153 EVVKHKKFNLRPMSEDEAILQMNMLEHAFFMFRNAKTGEINVVYRRDDGNYAVLEPSE 210
[143][TOP]
>UniRef100_B0MGZ9 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM
14662 RepID=B0MGZ9_9FIRM
Length = 176
Score = 55.1 bits (131), Expect = 2e-06
Identities = 23/56 (41%), Positives = 38/56 (67%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+++ K F + P +E+A + + +L H+ +V+RN DT E+NVVYKR + G I+PE
Sbjct: 120 IIRSKKFAIKPMDVEEACIQMDLLGHNFFVFRNADTFEVNVVYKRKGNTYGLIEPE 175
[144][TOP]
>UniRef100_UPI00017F60C6 putative sigma 54 modulation protein n=1 Tax=Clostridium difficile
QCD-23m63 RepID=UPI00017F60C6
Length = 185
Score = 54.7 bits (130), Expect = 3e-06
Identities = 22/56 (39%), Positives = 39/56 (69%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+ +RK F + P S E+A++ ++++ H+ Y++RN+D EIN+VYKR G G I+ +
Sbjct: 130 IERRKKFNVKPMSSEEAILQMELVGHNFYMFRNQDNFEINIVYKRKAGGYGLIEQD 185
[145][TOP]
>UniRef100_UPI00017F5ACC putative sigma 54 modulation protein n=1 Tax=Clostridium difficile
ATCC 43255 RepID=UPI00017F5ACC
Length = 185
Score = 54.7 bits (130), Expect = 3e-06
Identities = 22/56 (39%), Positives = 39/56 (69%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+ +RK F + P S E+A++ ++++ H+ Y++RN+D EIN+VYKR G G I+ +
Sbjct: 130 IERRKKFNVKPMSSEEAILQMELVGHNFYMFRNQDNFEINIVYKRKAGGYGLIEQD 185
[146][TOP]
>UniRef100_UPI00006DCB57 hypothetical protein CdifQ_04002839 n=1 Tax=Clostridium difficile
QCD-32g58 RepID=UPI00006DCB57
Length = 138
Score = 54.7 bits (130), Expect = 3e-06
Identities = 22/56 (39%), Positives = 39/56 (69%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+ +RK F + P S E+A++ ++++ H+ Y++RN+D EIN+VYKR G G I+ +
Sbjct: 83 IERRKKFNVKPMSSEEAILQMELVGHNFYMFRNQDNFEINIVYKRKAGGYGLIEQD 138
[147][TOP]
>UniRef100_C9XLM7 Putative sigma 54 modulation protein n=3 Tax=Clostridium difficile
RepID=C9XLM7_CLODI
Length = 187
Score = 54.7 bits (130), Expect = 3e-06
Identities = 22/56 (39%), Positives = 39/56 (69%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+ +RK F + P S E+A++ ++++ H+ Y++RN+D EIN+VYKR G G I+ +
Sbjct: 132 IERRKKFNVKPMSSEEAILQMELVGHNFYMFRNQDNFEINIVYKRKAGGYGLIEQD 187
[148][TOP]
>UniRef100_C6LIX7 Ribosomal subunit interface protein n=1 Tax=Bryantella
formatexigens DSM 14469 RepID=C6LIX7_9FIRM
Length = 176
Score = 54.7 bits (130), Expect = 3e-06
Identities = 24/61 (39%), Positives = 40/61 (65%)
Frame = -2
Query: 280 PKSQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
P+ +++ K F + P EDA + +++L H+ +V+ N +TEE+NVVYKR + G I+P
Sbjct: 115 PEEVNIIRTKHFGIKPMYPEDACIQMELLGHNFFVFCNAETEEVNVVYKRKGNTYGLIEP 174
Query: 100 E 98
E
Sbjct: 175 E 175
[149][TOP]
>UniRef100_Q8XIE9 30S ribosomal protein S30AE family n=1 Tax=Clostridium perfringens
RepID=Q8XIE9_CLOPE
Length = 179
Score = 54.3 bits (129), Expect = 4e-06
Identities = 22/59 (37%), Positives = 39/59 (66%)
Frame = -2
Query: 277 KSQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
K ++VK K F + P E+AV+ ++++ HD +V+++ +T ++NVVYKR G I+P
Sbjct: 116 KEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVFQDPETNQLNVVYKRKDGNYGLIEP 174
[150][TOP]
>UniRef100_C0Z6T8 Putative uncharacterized protein yvyD n=1 Tax=Brevibacillus brevis
NBRC 100599 RepID=C0Z6T8_BREBN
Length = 185
Score = 54.3 bits (129), Expect = 4e-06
Identities = 22/57 (38%), Positives = 38/57 (66%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
++V+ K F + P ++AVM + ML H +V++N DT +++VVY+RN G I+P+
Sbjct: 129 DIVRTKRFDLKPMDAQEAVMQMDMLGHSFFVFQNSDTNDVSVVYRRNDGRYGLIEPK 185
[151][TOP]
>UniRef100_A7Z9A0 YvyD n=1 Tax=Bacillus amyloliquefaciens FZB42 RepID=A7Z9A0_BACA2
Length = 188
Score = 54.3 bits (129), Expect = 4e-06
Identities = 24/60 (40%), Positives = 38/60 (63%)
Frame = -2
Query: 274 SQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
S E+V++K F + P E+A++ + ML H+ +V+ N +T NVVY+RN G I+P E
Sbjct: 129 SPEIVRQKRFNLKPMDNEEAILQMNMLGHNFFVFTNAETNLTNVVYRRNDGKYGLIEPTE 188
[152][TOP]
>UniRef100_C0BYR7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM
15053 RepID=C0BYR7_9CLOT
Length = 178
Score = 54.3 bits (129), Expect = 4e-06
Identities = 24/57 (42%), Positives = 38/57 (66%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
++V+ K F + P EDA + + +L HD +V+ N DT+E+NVVY+R + G I+PE
Sbjct: 120 KIVRTKRFGIKPMYPEDACIQMDLLGHDFFVFCNADTDEVNVVYRRKNGTFGLIEPE 176
[153][TOP]
>UniRef100_B7A6F1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Thermus
aquaticus Y51MC23 RepID=B7A6F1_THEAQ
Length = 186
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Frame = -2
Query: 280 PKSQE---VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGH 110
P+ +E +V+ K F M P E+AV ++ L HD +V+RN T+EINVVY+R G
Sbjct: 123 PEEEEGPRIVRVKRFEMKPMDPEEAVFQMEALGHDFFVFRNAKTDEINVVYRRKDGNYGL 182
Query: 109 IQP 101
I+P
Sbjct: 183 IEP 185
[154][TOP]
>UniRef100_Q0TND9 Ribosomal subunit interface protein n=6 Tax=Clostridium perfringens
RepID=Q0TND9_CLOP1
Length = 179
Score = 54.3 bits (129), Expect = 4e-06
Identities = 22/59 (37%), Positives = 39/59 (66%)
Frame = -2
Query: 277 KSQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
K ++VK K F + P E+AV+ ++++ HD +V+++ +T ++NVVYKR G I+P
Sbjct: 116 KEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVFQDPETNQLNVVYKRKDGNYGLIEP 174
[155][TOP]
>UniRef100_A8RDK2 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM
3991 RepID=A8RDK2_9FIRM
Length = 177
Score = 54.3 bits (129), Expect = 4e-06
Identities = 23/59 (38%), Positives = 39/59 (66%)
Frame = -2
Query: 274 SQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+ E+V+ K T+ L++A+M ++ML H ++YR+ +T EI VVYKR+ G G ++ E
Sbjct: 119 NDELVRTKTVTVDTMELDEAIMRMEMLGHSFFIYRDNETNEIAVVYKRHDGGYGLLETE 177
[156][TOP]
>UniRef100_A9RWK9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RWK9_PHYPA
Length = 221
Score = 54.3 bits (129), Expect = 4e-06
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEEDE 89
E+V+ K F M P +A+ L + HD Y +RN ++ EIN++YKR H G G I P +E
Sbjct: 150 EIVRTKYFEMRPMKPLEALEQLVNVGHDFYAFRNVESGEINILYKRTHGGYGIIVPRNEE 209
[157][TOP]
>UniRef100_A5CYJ2 Ribosome-associated protein Y n=1 Tax=Pelotomaculum
thermopropionicum SI RepID=A5CYJ2_PELTS
Length = 175
Score = 53.9 bits (128), Expect = 5e-06
Identities = 23/65 (35%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Frame = -2
Query: 283 VPKSQE---VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIG 113
VP+ ++ +V+ K F + P +E+A++ + +L H +V+ N +TE++NVVY+R G
Sbjct: 110 VPEEEDGPRLVRTKRFAIKPMPVEEAILQMNLLGHSFFVFSNAETEQVNVVYRRKDGNYG 169
Query: 112 HIQPE 98
I+PE
Sbjct: 170 LIEPE 174
[158][TOP]
>UniRef100_C6PBD3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571
RepID=C6PBD3_CLOTS
Length = 179
Score = 53.9 bits (128), Expect = 5e-06
Identities = 23/56 (41%), Positives = 37/56 (66%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
EVVK K F + P S+++A++ + +L H+ +V+ N DT++ VVYKR G I+P
Sbjct: 122 EVVKTKRFPVKPMSVQEAILQMNLLGHNFFVFTNSDTDDFTVVYKRKDGRYGLIEP 177
[159][TOP]
>UniRef100_C4CGR1 SSU ribosomal protein S30P n=1 Tax=Sphaerobacter thermophilus DSM
20745 RepID=C4CGR1_9CHLR
Length = 194
Score = 53.9 bits (128), Expect = 5e-06
Identities = 26/59 (44%), Positives = 39/59 (66%)
Frame = -2
Query: 274 SQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
S+ +V+RK F + P S E+A+ +++L HD +V+ N D EINV+Y+R G IQPE
Sbjct: 134 SELLVRRKRFKIQPMSEEEAIEQMELLGHDFFVFFNPDLAEINVLYRRRDGLYGVIQPE 192
[160][TOP]
>UniRef100_C0FKQ0 Putative uncharacterized protein n=1 Tax=Clostridium sp. M62/1
RepID=C0FKQ0_9CLOT
Length = 175
Score = 53.9 bits (128), Expect = 5e-06
Identities = 25/57 (43%), Positives = 36/57 (63%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
++ K K F M P E+A + +++L H YV+ N +TEE+NVVYKR G I+PE
Sbjct: 118 KIEKVKKFAMKPMDPEEACVQMELLGHSFYVFLNAETEEVNVVYKRKGHTYGLIEPE 174
[161][TOP]
>UniRef100_B6G1P8 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
13275 RepID=B6G1P8_9CLOT
Length = 190
Score = 53.9 bits (128), Expect = 5e-06
Identities = 21/56 (37%), Positives = 39/56 (69%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+ +RK F + P S+E+A++ + + DHD Y+++++++ EI +VYKR G G I+ E
Sbjct: 134 IERRKKFNLKPMSIEEAILQMNLTDHDFYMFKDRESFEICLVYKRKEGGYGLIEQE 189
[162][TOP]
>UniRef100_B5CNW3 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC
29176 RepID=B5CNW3_9FIRM
Length = 186
Score = 53.9 bits (128), Expect = 5e-06
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
++V+ K F + P EDA + +++L H +V+ N +T+E+NVVYKR G I+PE
Sbjct: 128 QIVRTKKFGIKPMFPEDACIQMELLGHSFFVFSNAETDEVNVVYKRKDGSFGLIEPE 184
[163][TOP]
>UniRef100_A3DJE4 Sigma 54 modulation protein / SSU ribosomal protein S30P n=3
Tax=Clostridium thermocellum RepID=A3DJE4_CLOTH
Length = 177
Score = 53.9 bits (128), Expect = 5e-06
Identities = 22/57 (38%), Positives = 37/57 (64%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
EVV+ K F + P ++E+A++ + +L H +++ N +T E NVVY+R G I+PE
Sbjct: 120 EVVRTKKFAIKPMTVEEAILQMNLLGHQFFMFSNAETNEANVVYRRKDGNYGLIEPE 176
[164][TOP]
>UniRef100_C4ZI34 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Eubacterium rectale
ATCC 33656 RepID=C4ZI34_EUBR3
Length = 175
Score = 53.5 bits (127), Expect = 7e-06
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
++V+ K F M P EDA + +++ HD +V+RN + +E+NVVYKR G I+PE
Sbjct: 118 KIVRTKRFGMKPMYPEDACIQMELSGHDFFVFRNAENDEVNVVYKRKGHTYGLIEPE 174
[165][TOP]
>UniRef100_B8I5T8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Clostridium cellulolyticum H10 RepID=B8I5T8_CLOCE
Length = 176
Score = 53.5 bits (127), Expect = 7e-06
Identities = 21/57 (36%), Positives = 38/57 (66%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+VV+ K F + P +E+A++ + +L H+ +++ N D+ ++NVVYKR G I+PE
Sbjct: 119 KVVRSKRFAVKPMDVEEAILQMNLLGHEFFMFYNADSRQVNVVYKRKDGNYGLIEPE 175
[166][TOP]
>UniRef100_B5YF17 Ribosomal subunit interface protein n=1 Tax=Dictyoglomus
thermophilum H-6-12 RepID=B5YF17_DICT6
Length = 179
Score = 53.5 bits (127), Expect = 7e-06
Identities = 24/64 (37%), Positives = 41/64 (64%)
Frame = -2
Query: 283 VPKSQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQ 104
V + +VVK K F + P +E+A++ +++L HD +++R+ +T+ I VVYKR G I
Sbjct: 116 VEEKPQVVKVKRFLLKPMDVEEAILQMELLGHDFFIFRDAETDRIGVVYKRKDGKYGLII 175
Query: 103 PEED 92
EE+
Sbjct: 176 GEEE 179
[167][TOP]
>UniRef100_B0TGY7 Sigma 54 modulation protein/ribosomal protein s30ae n=1
Tax=Heliobacterium modesticaldum Ice1 RepID=B0TGY7_HELMI
Length = 174
Score = 53.5 bits (127), Expect = 7e-06
Identities = 22/58 (37%), Positives = 37/58 (63%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEED 92
VV+ K F + P +++A+M + ++ H +V+ N +TE++NVVY R G I+PE D
Sbjct: 117 VVRSKRFALKPMPVDEAIMQMNLIGHSFFVFSNAETEQVNVVYLRKDGNYGLIEPEFD 174
[168][TOP]
>UniRef100_C7ICT8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Clostridium papyrosolvens DSM 2782
RepID=C7ICT8_9CLOT
Length = 176
Score = 53.5 bits (127), Expect = 7e-06
Identities = 21/57 (36%), Positives = 38/57 (66%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+VV+ K F + P +E+A++ + +L H+ +++ N D+ ++NVVYKR G I+PE
Sbjct: 119 KVVRSKRFAVKPMDVEEAILQMNLLGHEFFMFYNADSRQVNVVYKRKDGNYGLIEPE 175
[169][TOP]
>UniRef100_C0EWH6 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM
3353 RepID=C0EWH6_9FIRM
Length = 175
Score = 53.5 bits (127), Expect = 7e-06
Identities = 23/56 (41%), Positives = 37/56 (66%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+ K K F + P +E+A + +++L H+ +V+RN +T E+NVVYKR G I+PE
Sbjct: 119 ITKSKRFAIKPMDVEEACVQMELLGHNFFVFRNAETFEVNVVYKRKDKTYGLIEPE 174
[170][TOP]
>UniRef100_B6FRG1 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM
1787 RepID=B6FRG1_9CLOT
Length = 178
Score = 53.5 bits (127), Expect = 7e-06
Identities = 22/57 (38%), Positives = 40/57 (70%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
++++ K F + P EDA + +++L H+ +V+ N +T+E+NVVYKR ++ G I+PE
Sbjct: 120 KIIRTKRFGIKPMFPEDACVQMELLGHNFFVFSNAETDEVNVVYKRKNNTYGLIEPE 176
[171][TOP]
>UniRef100_B0NJJ3 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC
35704 RepID=B0NJJ3_EUBSP
Length = 179
Score = 53.5 bits (127), Expect = 7e-06
Identities = 23/57 (40%), Positives = 38/57 (66%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
++V+ K F P EDA + +++L HD +V+ N +T+E+NVVY+R + G I+PE
Sbjct: 121 KIVRTKKFGFKPMYPEDACVQMELLGHDFFVFCNAETDEVNVVYRRKNGTFGLIEPE 177
[172][TOP]
>UniRef100_A6BHR0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM
13814 RepID=A6BHR0_9FIRM
Length = 178
Score = 53.5 bits (127), Expect = 7e-06
Identities = 23/57 (40%), Positives = 38/57 (66%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
++V+ K F P EDA + +++L HD YV+ N +++E+NVVY+R + G I+PE
Sbjct: 120 KIVRTKKFGFKPMYPEDACVQMELLGHDFYVFCNAESDEVNVVYRRKNGTFGLIEPE 176
[173][TOP]
>UniRef100_P28368 Uncharacterized protein yvyD n=1 Tax=Bacillus subtilis
RepID=YVYD_BACSU
Length = 189
Score = 53.5 bits (127), Expect = 7e-06
Identities = 23/61 (37%), Positives = 39/61 (63%)
Frame = -2
Query: 277 KSQEVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+S ++V++K F + P E+A++ + ML H+ +V+ N +T NVVY+RN G I+P
Sbjct: 129 ESLDIVRQKRFNLKPMDSEEAILQMNMLGHNFFVFTNAETNLTNVVYRRNDGKYGLIEPT 188
Query: 97 E 95
E
Sbjct: 189 E 189
[174][TOP]
>UniRef100_B0S0M8 30S ribosomal protein S30AE family n=1 Tax=Finegoldia magna ATCC
29328 RepID=B0S0M8_FINM2
Length = 179
Score = 53.1 bits (126), Expect = 9e-06
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
+VK K F + P E+A+M ++++DHD +V+ + T +NVVYKRN G + P
Sbjct: 121 IVKTKEFGIKPMDKEEAIMQMELIDHDFFVFLDSKTNNVNVVYKRNDGNYGLLVP 175
[175][TOP]
>UniRef100_C9LS67 Ribosomal subunit interface protein n=1 Tax=Selenomonas sputigena
ATCC 35185 RepID=C9LS67_9FIRM
Length = 181
Score = 53.1 bits (126), Expect = 9e-06
Identities = 22/55 (40%), Positives = 38/55 (69%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQP 101
+VK K F + P +++A+M + +L+H+ +V+RN ++EEINVVY+R I+P
Sbjct: 125 LVKTKRFVVKPMDVQEAIMQMNLLNHNFFVFRNAESEEINVVYRRTDGKYALIEP 179
[176][TOP]
>UniRef100_C4GCR0 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles
DSM 14600 RepID=C4GCR0_9FIRM
Length = 176
Score = 53.1 bits (126), Expect = 9e-06
Identities = 22/58 (37%), Positives = 37/58 (63%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPEE 95
++V+ K F + P EDA +++L H +V+ N +T+ +NVVY+R + G I+PEE
Sbjct: 119 KIVRTKKFDLKPMYAEDACAQMELLGHSFFVFTNAETDAVNVVYRRKNGSYGLIEPEE 176
[177][TOP]
>UniRef100_B7AN97 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus
ATCC 43243 RepID=B7AN97_9BACE
Length = 179
Score = 53.1 bits (126), Expect = 9e-06
Identities = 23/57 (40%), Positives = 38/57 (66%)
Frame = -2
Query: 268 EVVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
++++ K F + P E+A + +++L H YV+ N +TE+INVVYKR + G I+PE
Sbjct: 122 KIIRTKRFDVKPMDPEEACVQMELLGHSFYVFFNSETEQINVVYKRKGNTYGLIEPE 178
[178][TOP]
>UniRef100_B6ANG7 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Leptospirillum sp. Group II '5-way CG'
RepID=B6ANG7_9BACT
Length = 176
Score = 53.1 bits (126), Expect = 9e-06
Identities = 22/56 (39%), Positives = 38/56 (67%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+VK K F + P SL+DA++ +++LD D ++Y + +E + V+Y+R +G IQPE
Sbjct: 121 LVKTKRFPVKPMSLDDAILQMELLDKDFFLYTDVASESLRVLYRRKDGSLGQIQPE 176
[179][TOP]
>UniRef100_A5KKP2 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC
27756 RepID=A5KKP2_9FIRM
Length = 198
Score = 53.1 bits (126), Expect = 9e-06
Identities = 23/56 (41%), Positives = 36/56 (64%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+V+ K F + P EDA + +++L H +V+ N +T+E+NVVYKR G I+PE
Sbjct: 141 IVRTKKFGIKPMFPEDACIQMELLGHSFFVFSNAETDEVNVVYKRKDGSFGLIEPE 196
[180][TOP]
>UniRef100_A3EWH8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Leptospirillum rubarum RepID=A3EWH8_9BACT
Length = 176
Score = 53.1 bits (126), Expect = 9e-06
Identities = 22/56 (39%), Positives = 38/56 (67%)
Frame = -2
Query: 265 VVKRKVFTMPPQSLEDAVMCLKMLDHDLYVYRNKDTEEINVVYKRNHDGIGHIQPE 98
+VK K F + P SL+DA++ +++LD D ++Y + +E + V+Y+R +G IQPE
Sbjct: 121 LVKTKRFPVKPMSLDDAILQMELLDKDFFLYTDVASESLRVLYRRRDGSLGQIQPE 176