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[1][TOP]
>UniRef100_B9RZ91 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9RZ91_RICCO
Length = 1194
Score = 135 bits (339), Expect = 2e-30
Identities = 65/118 (55%), Positives = 86/118 (72%)
Frame = +2
Query: 179 VDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLI 358
++E+YED ++ +I+ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ +VDES DI +
Sbjct: 11 LNEDYEDEDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIR 70
Query: 359 PEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
PE Q+ PG + T I FGQ+ +SKP TE++GE TL+P ARLRNLTYS PL
Sbjct: 71 PESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPL 128
[2][TOP]
>UniRef100_A8I9Z6 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8I9Z6_CHLRE
Length = 1634
Score = 135 bits (339), Expect = 2e-30
Identities = 63/123 (51%), Positives = 92/123 (74%), Gaps = 4/123 (3%)
Frame = +2
Query: 176 GVDEEY----EDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESP 343
G DE++ ++ D +I ED+W VI A+FD+ GLVRQQL S+NEFV+VT+Q ++DE+P
Sbjct: 3 GADEDHMEVVQEEEDTEIVQEDSWNVITAFFDDKGLVRQQLDSFNEFVNVTIQEIIDETP 62
Query: 344 DIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYS 523
+IV+ PE Q++PG +A +E + +IKFGQ+ +S+P TE +GE+ L+P +ARLRNLTY
Sbjct: 63 EIVIKPESQHLPGVEAAEEK-EYIIKFGQVYLSRPQITEQDGESVVLFPKEARLRNLTYC 121
Query: 524 TPL 532
PL
Sbjct: 122 APL 124
[3][TOP]
>UniRef100_A9SJE5 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9SJE5_PHYPA
Length = 1185
Score = 134 bits (336), Expect = 5e-30
Identities = 68/119 (57%), Positives = 85/119 (71%)
Frame = +2
Query: 176 GVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVL 355
G DEEY+D + +I+ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ +VDES DI +
Sbjct: 3 GGDEEYDDEEE-EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESSDIEI 61
Query: 356 IPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
PE Q+ PGR A + I FGQ+ +SKP TE +GE TL+P ARLRNLTYS PL
Sbjct: 62 RPESQHNPGRQAEIGDVTYKINFGQIYLSKPMMTEADGETATLWPKAARLRNLTYSAPL 120
[4][TOP]
>UniRef100_Q1L5X1 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=Q1L5X1_CHLRE
Length = 1607
Score = 133 bits (335), Expect = 7e-30
Identities = 61/116 (52%), Positives = 88/116 (75%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E ++ D +I ED+W VI A+FD+ GLVRQQL S+NEFV+VT+Q ++DE+P+IV+ PE
Sbjct: 2 EVVQEEEDTEIVQEDSWNVITAFFDDKGLVRQQLDSFNEFVNVTIQEIIDETPEIVIKPE 61
Query: 365 DQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
Q++PG +A +E + +IKFGQ+ +S+P TE +GE+ L+P +ARLRNLTY PL
Sbjct: 62 SQHLPGVEAAEEK-EYIIKFGQVYLSRPQITEQDGESVVLFPKEARLRNLTYCAPL 116
[5][TOP]
>UniRef100_A7PJ31 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
RepID=A7PJ31_VITVI
Length = 1220
Score = 132 bits (331), Expect = 2e-29
Identities = 66/121 (54%), Positives = 85/121 (70%)
Frame = +2
Query: 170 YNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDI 349
Y+ E E+ +D +I+ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ +VDES DI
Sbjct: 7 YDPTVVEEEEDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 66
Query: 350 VLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTP 529
+ PE Q+ PGR + T I FGQ+ +SKP TE++GE TL+P ARLRNLTYS P
Sbjct: 67 EIRPESQHNPGRQSDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 126
Query: 530 L 532
L
Sbjct: 127 L 127
[6][TOP]
>UniRef100_A5C1N0 DNA-directed RNA polymerase n=2 Tax=Vitis RepID=A5C1N0_VITVI
Length = 1193
Score = 132 bits (331), Expect = 2e-29
Identities = 66/121 (54%), Positives = 85/121 (70%)
Frame = +2
Query: 170 YNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDI 349
Y+ E E+ +D +I+ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ +VDES DI
Sbjct: 7 YDPTVVEEEEDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 66
Query: 350 VLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTP 529
+ PE Q+ PGR + T I FGQ+ +SKP TE++GE TL+P ARLRNLTYS P
Sbjct: 67 EIRPESQHNPGRQSDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 126
Query: 530 L 532
L
Sbjct: 127 L 127
[7][TOP]
>UniRef100_Q10G20 DNA-directed RNA polymerase n=2 Tax=Oryza sativa RepID=Q10G20_ORYSJ
Length = 1222
Score = 131 bits (330), Expect = 3e-29
Identities = 69/130 (53%), Positives = 87/130 (66%), Gaps = 5/130 (3%)
Frame = +2
Query: 158 EDGVYNGVDEEYED-----PNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQ 322
E G G + E E+ P++ +I+ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ
Sbjct: 30 EYGAVGGEEMEDEEADGDAPDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQ 89
Query: 323 RLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQAR 502
+VDES DI + PE Q+ PGR A T I FGQ+ +SKP TE +GE TL+P AR
Sbjct: 90 EIVDESADIEIRPESQHNPGRQAEFAETLHKISFGQIYLSKPMMTEADGETATLFPKSAR 149
Query: 503 LRNLTYSTPL 532
LRNLTYS PL
Sbjct: 150 LRNLTYSAPL 159
[8][TOP]
>UniRef100_P38420 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Arabidopsis
thaliana RepID=RPB2_ARATH
Length = 1188
Score = 131 bits (329), Expect = 3e-29
Identities = 65/121 (53%), Positives = 83/121 (68%)
Frame = +2
Query: 170 YNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDI 349
Y + ED +D +I+ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ +VDES DI
Sbjct: 6 YEPEPQYVEDDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 65
Query: 350 VLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTP 529
+ PE Q+ PG + T I FGQ+ +SKP TE++GE TL+P ARLRNLTYS P
Sbjct: 66 EIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 125
Query: 530 L 532
L
Sbjct: 126 L 126
[9][TOP]
>UniRef100_Q1L5Z3 DNA-directed RNA polymerase n=1 Tax=Antirrhinum majus
RepID=Q1L5Z3_ANTMA
Length = 1198
Score = 130 bits (328), Expect = 4e-29
Identities = 66/134 (49%), Positives = 88/134 (65%)
Frame = +2
Query: 131 LYDMSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVS 310
+Y D + V D + E+ D DIS EDAW VI++YF+E GLVRQQL S++EF+
Sbjct: 1 MYGGGDPYPDQNVVEVHDHDEEEKEDEDISQEDAWTVISSYFEEKGLVRQQLDSFDEFIQ 60
Query: 311 VTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYP 490
TMQ +VDES +I + PE Q+ PG ++ I FGQ+ +SKP TE++GE TL+P
Sbjct: 61 NTMQEIVDESSNIEIRPESQHNPGGNSDFAEAMYRISFGQIYLSKPMMTESDGETNTLFP 120
Query: 491 NQARLRNLTYSTPL 532
ARLRNLTYS+PL
Sbjct: 121 KAARLRNLTYSSPL 134
[10][TOP]
>UniRef100_Q1L5Y8 DNA-directed RNA polymerase n=1 Tax=Antirrhinum majus
RepID=Q1L5Y8_ANTMA
Length = 1200
Score = 130 bits (328), Expect = 4e-29
Identities = 65/117 (55%), Positives = 82/117 (70%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
+E E+ + DIS EDAW VI+AYF+E GLVRQQL S++EF+ TMQ +VDES DI + P
Sbjct: 18 NENDEEEEEEDISQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRP 77
Query: 362 EDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
E Q+ PG+ T I FGQ+ +SKP TE++GE TL+P ARLRNLTYS PL
Sbjct: 78 ESQHNPGQQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPL 134
[11][TOP]
>UniRef100_C5WR62 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5WR62_SORBI
Length = 1218
Score = 130 bits (327), Expect = 6e-29
Identities = 70/131 (53%), Positives = 85/131 (64%), Gaps = 4/131 (3%)
Frame = +2
Query: 152 GNEDGVYNGVDEEYEDPNDAD----ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTM 319
G DG +G + E E D D I +DAW VI+AYF+E GLVRQQL S++EF+ TM
Sbjct: 40 GGGDGDGDGEEMEEEADGDPDLRDEIGQDDAWAVISAYFEEKGLVRQQLDSFDEFIQNTM 99
Query: 320 QRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQA 499
Q +VDES DI + PE Q+ PGR A T I FGQ+ +SKP TE +GE TL+P A
Sbjct: 100 QEIVDESADIEIRPESQHNPGRQAEFAETLHKISFGQIYLSKPMMTEADGETATLFPKSA 159
Query: 500 RLRNLTYSTPL 532
RLRNLTYS PL
Sbjct: 160 RLRNLTYSAPL 170
[12][TOP]
>UniRef100_B9FA12 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9FA12_ORYSJ
Length = 1218
Score = 130 bits (326), Expect = 8e-29
Identities = 64/111 (57%), Positives = 80/111 (72%)
Frame = +2
Query: 200 PNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVP 379
P++ +I+ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ +VDES DI + PE Q+ P
Sbjct: 45 PDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNP 104
Query: 380 GRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
GR A T I FGQ+ +SKP TE +GE TL+P ARLRNLTYS PL
Sbjct: 105 GRQAEFAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPL 155
[13][TOP]
>UniRef100_Q42877 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Solanum
lycopersicum RepID=RPB2_SOLLC
Length = 1191
Score = 129 bits (325), Expect = 1e-28
Identities = 65/123 (52%), Positives = 86/123 (69%), Gaps = 5/123 (4%)
Frame = +2
Query: 179 VDEEYE-----DPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESP 343
+++EYE D ++ +I+ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ +VDES
Sbjct: 3 MEDEYEPQYNVDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA 62
Query: 344 DIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYS 523
DI + PE Q+ PG + T I FGQ+ +SKP TE++GE TL+P ARLRNLTYS
Sbjct: 63 DIEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS 122
Query: 524 TPL 532
PL
Sbjct: 123 APL 125
[14][TOP]
>UniRef100_Q1L5Y9 DNA-directed RNA polymerase n=1 Tax=Petunia x hybrida
RepID=Q1L5Y9_PETHY
Length = 1195
Score = 129 bits (324), Expect = 1e-28
Identities = 63/118 (53%), Positives = 83/118 (70%)
Frame = +2
Query: 179 VDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLI 358
++ E E+ + +I+ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ +VDES DI +
Sbjct: 12 MNNEEEEEEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIR 71
Query: 359 PEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
PE Q+ PG + T I FGQ+ +SKP TE++GE TL+P ARLRNLTYS PL
Sbjct: 72 PESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPL 129
[15][TOP]
>UniRef100_Q1L5B4 DNA-directed RNA polymerase n=1 Tax=Rhododendron macrophyllum
RepID=Q1L5B4_RHOMC
Length = 1207
Score = 129 bits (323), Expect = 2e-28
Identities = 65/134 (48%), Positives = 91/134 (67%)
Frame = +2
Query: 131 LYDMSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVS 310
+ ++ D G+ DG + +D ++ +IS EDAW VI+AYF+E GLVRQQL S++EF+
Sbjct: 17 IVNVGDGGDGDG-------DGDDDDEEEISQEDAWTVISAYFEEKGLVRQQLDSFDEFIQ 69
Query: 311 VTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYP 490
TMQ +VDE+ DI + PE Q+ PGR + I FGQ+ +SKP TE++GE +L+P
Sbjct: 70 NTMQEIVDEAADIEIKPESQHNPGRQSDFVEMVYRISFGQIYLSKPMMTESDGETASLFP 129
Query: 491 NQARLRNLTYSTPL 532
ARLRNLTYS+PL
Sbjct: 130 KAARLRNLTYSSPL 143
[16][TOP]
>UniRef100_B9H2V2 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9H2V2_POPTR
Length = 690
Score = 129 bits (323), Expect = 2e-28
Identities = 64/116 (55%), Positives = 81/116 (69%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E E+ D +I+ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ +VDES DI + PE
Sbjct: 2 EPEEEDADEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPE 61
Query: 365 DQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
Q+ PG + T I FGQ+ +SKP TE++GE TL+P ARLRNLTYS PL
Sbjct: 62 SQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPL 117
[17][TOP]
>UniRef100_Q1L5B5 DNA-directed RNA polymerase n=1 Tax=Rhododendron macrophyllum
RepID=Q1L5B5_RHOMC
Length = 1191
Score = 128 bits (321), Expect = 3e-28
Identities = 64/120 (53%), Positives = 84/120 (70%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYE---DPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
+EEY+ + + +I+ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ +VDES DI
Sbjct: 6 EEEYDPTMEDEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIE 65
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
+ PE Q+ PG + T I FGQ+ +SKP TE++GE TL+P ARLRNLTYS PL
Sbjct: 66 IRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPL 125
[18][TOP]
>UniRef100_Q1L5Z2 DNA-directed RNA polymerase n=1 Tax=Petunia x hybrida
RepID=Q1L5Z2_PETHY
Length = 1203
Score = 127 bits (318), Expect = 6e-28
Identities = 65/131 (49%), Positives = 90/131 (68%), Gaps = 2/131 (1%)
Frame = +2
Query: 146 DSGNEDGVYNGVDEEYEDPNDA--DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTM 319
D +D VDE+ +D +D +I+ +DAW VI+AYF+E GLVRQQL S++EF+ TM
Sbjct: 9 DENIDDRTTMAVDEQEDDYDDESQEITQDDAWAVISAYFEEKGLVRQQLDSFDEFIQNTM 68
Query: 320 QRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQA 499
Q +VDE+ DI + PE Q+ P R + +T IKF Q+ +S+P TE++GE TL+P A
Sbjct: 69 QEIVDETADIEIRPESQHNPARQSDFVDTIYKIKFTQIYLSRPMMTESDGETNTLFPKAA 128
Query: 500 RLRNLTYSTPL 532
RLRNLTYS+PL
Sbjct: 129 RLRNLTYSSPL 139
[19][TOP]
>UniRef100_Q1L5Z1 DNA-directed RNA polymerase n=1 Tax=Solanum lycopersicum
RepID=Q1L5Z1_SOLLC
Length = 1205
Score = 126 bits (316), Expect = 1e-27
Identities = 65/133 (48%), Positives = 89/133 (66%), Gaps = 1/133 (0%)
Frame = +2
Query: 137 DMSDSGNEDGVYNG-VDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSV 313
DM +E G G VDE+ ++ +I+ +DAW VI++YF+E GLVRQQL S++EF+
Sbjct: 13 DMVQVEDEGGEGRGDVDEDEDEDESREITQDDAWAVISSYFEEKGLVRQQLDSFDEFIQN 72
Query: 314 TMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPN 493
TMQ +VDE+ DI + PE Q+ P R T IKF Q+ +S+P TE++GE TL+P
Sbjct: 73 TMQEIVDETADIEIRPESQHNPSRQPDFVETIYKIKFTQIYLSRPMMTESDGETNTLFPK 132
Query: 494 QARLRNLTYSTPL 532
ARLRNLTYS+PL
Sbjct: 133 AARLRNLTYSSPL 145
[20][TOP]
>UniRef100_Q1L5Z4 DNA-directed RNA polymerase n=1 Tax=Nicotiana sylvestris
RepID=Q1L5Z4_NICSY
Length = 1203
Score = 123 bits (308), Expect = 9e-27
Identities = 65/132 (49%), Positives = 86/132 (65%), Gaps = 3/132 (2%)
Frame = +2
Query: 146 DSGNEDGVYNGVDEEYEDPND---ADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVT 316
D +D V VDEE E +I+ +DAW VI+AYF+E GLVRQQL S++EF+ T
Sbjct: 9 DENVDDRVLMAVDEEEEQAEGDEAQEITQDDAWAVISAYFEEKGLVRQQLDSFDEFIQNT 68
Query: 317 MQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQ 496
MQ +VDE+ +I + PE Q+ P R T IKF Q+ +S+P TE++GE TL+P
Sbjct: 69 MQEIVDETANIEIRPESQHNPSRQPDFVETIYKIKFTQIYLSRPMMTESDGETNTLFPKA 128
Query: 497 ARLRNLTYSTPL 532
ARLRNLTYS+PL
Sbjct: 129 ARLRNLTYSSPL 140
[21][TOP]
>UniRef100_A4RQU3 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus
CCE9901 RepID=A4RQU3_OSTLU
Length = 1174
Score = 120 bits (301), Expect = 6e-26
Identities = 60/114 (52%), Positives = 78/114 (68%), Gaps = 1/114 (0%)
Frame = +2
Query: 194 EDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQY 373
ED + +I EDAW VI+++F+E GLVRQQL S+NEF+ TMQ +VDE +I L PE Q+
Sbjct: 7 EDDEEEEIGQEDAWVVISSFFEEKGLVRQQLDSFNEFIQHTMQEIVDEMREIELTPEHQH 66
Query: 374 VPGRDAPDENTKVV-IKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
+PG+D K I F Q+ +SKP TE +G TL+P +ARLRNLTYS PL
Sbjct: 67 MPGQDIDSMEKKTYKISFNQIYLSKPMVTEADGYTTTLFPKEARLRNLTYSAPL 120
[22][TOP]
>UniRef100_Q54J75 DNA-directed RNA polymerase II subunit rpb2 n=1 Tax=Dictyostelium
discoideum RepID=RPB2_DICDI
Length = 1170
Score = 119 bits (298), Expect = 1e-25
Identities = 61/119 (51%), Positives = 81/119 (68%), Gaps = 1/119 (0%)
Frame = +2
Query: 179 VDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLI 358
++++ +D ADIS ED W VI+AYF E GLVRQQL S++EF+ TMQ ++DESP I L
Sbjct: 6 MNDDSQDNPHADISQEDVWTVISAYFQEKGLVRQQLDSFDEFIQNTMQEIIDESPPITLR 65
Query: 359 PEDQYVPGRDAPDENTKVV-IKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
PE Q+ PG+ N +KFGQ+ +SKP E +G + + PNQAR+RNLTYS PL
Sbjct: 66 PESQHHPGQAVVSNNVSTFSVKFGQIYLSKPT-AEIDGVSQQVTPNQARIRNLTYSAPL 123
[23][TOP]
>UniRef100_C1E1U0 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1E1U0_9CHLO
Length = 1178
Score = 115 bits (289), Expect = 1e-24
Identities = 56/118 (47%), Positives = 79/118 (66%), Gaps = 1/118 (0%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
+E + +I EDAW VI+++F+E GL RQQL S+NEF+ TMQ +VDE D + P
Sbjct: 3 EENVAVEEEEEIGQEDAWTVISSFFEEKGLARQQLDSFNEFIQHTMQEIVDEMSDFTIEP 62
Query: 362 EDQYVPGRDAPDE-NTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
E+Q++PG +A + K ++F Q+ +SKP TE +G TL+P +ARLRNLTYS PL
Sbjct: 63 EEQHMPGEEADGKGKKKYKVEFKQIYLSKPMVTEADGMTSTLFPKEARLRNLTYSAPL 120
[24][TOP]
>UniRef100_Q1WMR3 DNA-directed RNA polymerase n=1 Tax=Coprinellus disseminatus
RepID=Q1WMR3_COPDI
Length = 1241
Score = 114 bits (286), Expect = 3e-24
Identities = 60/119 (50%), Positives = 83/119 (69%)
Frame = +2
Query: 176 GVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVL 355
G+D++ +D A+I+ ED W VI ++FD+ GLVRQQL S++EFV TMQ LVDE+ D++L
Sbjct: 36 GMDDDGDD--FAEITQEDCWTVITSFFDQKGLVRQQLDSFDEFVQNTMQELVDENADLIL 93
Query: 356 IPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
DQ+ G D D + IKFGQ+ +S+P TE +G L+P +ARLRNLTYS+PL
Sbjct: 94 DQADQHT-GHDT-DMTRRYEIKFGQIYLSRPTVTEADGSVFPLFPQEARLRNLTYSSPL 150
[25][TOP]
>UniRef100_Q5CY45 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium parvum Iowa II
RepID=Q5CY45_CRYPV
Length = 1177
Score = 113 bits (282), Expect = 1e-23
Identities = 54/113 (47%), Positives = 76/113 (67%)
Frame = +2
Query: 194 EDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQY 373
E ND +I ED+W +I YF + GLV QQL+S+N+F+ +Q +VDE P I++ P+ QY
Sbjct: 10 EQKND-EIQQEDSWALIGTYFRDRGLVNQQLESFNDFIMYKLQEIVDEHPPIIITPQSQY 68
Query: 374 VPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
P D + V+KFGQL +S+P+ E G A L+PN+ARLRNLTYS+P+
Sbjct: 69 RPDEQI-DTKVRYVLKFGQLSLSRPSVEEREGVARGLWPNEARLRNLTYSSPV 120
[26][TOP]
>UniRef100_Q5CN11 DNA-directed RNA polymerase II second largest chain n=1
Tax=Cryptosporidium hominis RepID=Q5CN11_CRYHO
Length = 733
Score = 113 bits (282), Expect = 1e-23
Identities = 54/113 (47%), Positives = 76/113 (67%)
Frame = +2
Query: 194 EDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQY 373
E ND +I ED+W +I YF + GLV QQL+S+N+F+ +Q +VDE P I++ P+ QY
Sbjct: 10 EQKND-EIQQEDSWALIGTYFRDRGLVNQQLESFNDFIMYKLQEIVDEHPPIIITPQSQY 68
Query: 374 VPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
P D + V+KFGQL +S+P+ E G A L+PN+ARLRNLTYS+P+
Sbjct: 69 RPDEQI-DTKVRYVLKFGQLSLSRPSVEEREGVARGLWPNEARLRNLTYSSPV 120
[27][TOP]
>UniRef100_A8PJ53 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8PJ53_COPC7
Length = 742
Score = 112 bits (281), Expect = 1e-23
Identities = 59/116 (50%), Positives = 79/116 (68%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
EEY D + A I+ ED W VI+++FD+ GLVRQQL S++EFV TMQ LVDE+ D++L
Sbjct: 20 EEY-DEDYAPITQEDCWTVISSFFDQKGLVRQQLDSFDEFVQNTMQELVDENSDLILDQA 78
Query: 365 DQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
DQ+ A D + IKFGQ+ +S+P TE +G ++P +ARLRNLTYS PL
Sbjct: 79 DQHT--GQAGDMTRRYEIKFGQIYLSRPTVTEADGSVVPVFPQEARLRNLTYSAPL 132
[28][TOP]
>UniRef100_A8N2R8 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8N2R8_COPC7
Length = 1222
Score = 112 bits (281), Expect = 1e-23
Identities = 59/116 (50%), Positives = 79/116 (68%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
EEY D + A I+ ED W VI+++FD+ GLVRQQL S++EFV TMQ LVDE+ D++L
Sbjct: 20 EEY-DEDYAPITQEDCWTVISSFFDQKGLVRQQLDSFDEFVQNTMQELVDENSDLILDQA 78
Query: 365 DQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
DQ+ A D + IKFGQ+ +S+P TE +G ++P +ARLRNLTYS PL
Sbjct: 79 DQHT--GQAGDMTRRYEIKFGQIYLSRPTVTEADGSVVPVFPQEARLRNLTYSAPL 132
[29][TOP]
>UniRef100_UPI00017937B7 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide n=1 Tax=Acyrthosiphon pisum
RepID=UPI00017937B7
Length = 1101
Score = 112 bits (280), Expect = 2e-23
Identities = 62/127 (48%), Positives = 84/127 (66%), Gaps = 5/127 (3%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDA-DISAE----DAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLV 331
+Y+ D+EYE+ + DIS+E W VIN+YFDE GLVRQQL S++EF+ +++QR+V
Sbjct: 1 MYDLGDDEYEEEEETEDISSELWQEACWIVINSYFDEKGLVRQQLDSFDEFIQMSVQRIV 60
Query: 332 DESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRN 511
++SP I L E Q+ G D TK IKF Q+ +SKP E +G + PN+ARLRN
Sbjct: 61 EDSPQIELQAESQHTHGE--IDTPTKYQIKFEQIYLSKPTHWEKDGSPSPMMPNEARLRN 118
Query: 512 LTYSTPL 532
LTYS PL
Sbjct: 119 LTYSAPL 125
[30][TOP]
>UniRef100_B7FVG3 DNA-directed RNA polymerase n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B7FVG3_PHATR
Length = 1212
Score = 112 bits (279), Expect = 2e-23
Identities = 59/124 (47%), Positives = 83/124 (66%), Gaps = 8/124 (6%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
+E D ++ ++ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ LVD+S DI + PE
Sbjct: 16 DEVMDIDEIPVTQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQELVDDSGDIRVSPE 75
Query: 365 DQYVPGRD------APDENTKVV--IKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTY 520
Q++ G D ++ TK V I FGQ+ +SKP E +G ++P++ARLRN+TY
Sbjct: 76 IQHMVGYDDEAYDREQEKETKFVFEIHFGQVYLSKPTTVEKDGTITNMFPHEARLRNMTY 135
Query: 521 STPL 532
S PL
Sbjct: 136 SAPL 139
[31][TOP]
>UniRef100_Q5KIB7 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q5KIB7_CRYNE
Length = 1193
Score = 111 bits (277), Expect = 4e-23
Identities = 63/139 (45%), Positives = 84/139 (60%), Gaps = 4/139 (2%)
Frame = +2
Query: 128 PLYDMSDS----GNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSY 295
P YD S G+ED +E+Y+ D IS ED W VIN++F+E GLVRQQL+S+
Sbjct: 22 PDYDYSQQTAPKGDED------EEKYDVDEDEPISQEDYWTVINSFFEEKGLVRQQLESF 75
Query: 296 NEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEA 475
NEF+ TMQ +VD+ + L QY A DE + I FGQ+ +++ N TE +G
Sbjct: 76 NEFIENTMQEIVDDHSRLTLDQFTQYT--GVAGDETRRYEISFGQIYLARVNHTEMDGRT 133
Query: 476 XTLYPNQARLRNLTYSTPL 532
L+P +ARLRNLTYS PL
Sbjct: 134 NMLFPQEARLRNLTYSAPL 152
[32][TOP]
>UniRef100_Q55U25 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q55U25_CRYNE
Length = 1245
Score = 111 bits (277), Expect = 4e-23
Identities = 63/139 (45%), Positives = 84/139 (60%), Gaps = 4/139 (2%)
Frame = +2
Query: 128 PLYDMSDS----GNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSY 295
P YD S G+ED +E+Y+ D IS ED W VIN++F+E GLVRQQL+S+
Sbjct: 21 PDYDYSQQTAPKGDED------EEKYDVDEDEPISQEDYWTVINSFFEEKGLVRQQLESF 74
Query: 296 NEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEA 475
NEF+ TMQ +VD+ + L QY A DE + I FGQ+ +++ N TE +G
Sbjct: 75 NEFIENTMQEIVDDHSRLTLDQFTQYT--GVAGDETRRYEISFGQIYLARVNHTEMDGRT 132
Query: 476 XTLYPNQARLRNLTYSTPL 532
L+P +ARLRNLTYS PL
Sbjct: 133 NMLFPQEARLRNLTYSAPL 151
[33][TOP]
>UniRef100_B8C598 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana
CCMP1335 RepID=B8C598_THAPS
Length = 1196
Score = 110 bits (275), Expect = 6e-23
Identities = 58/120 (48%), Positives = 80/120 (66%), Gaps = 8/120 (6%)
Frame = +2
Query: 197 DPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYV 376
D +D ++ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ LVD+S I + PE Q++
Sbjct: 2 DLDDMPVTQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQELVDDSGSIRVSPEIQHL 61
Query: 377 PGRD------APDENTKVV--IKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
G D + TK V +KFGQ+ +SKP E +G ++P++ARLRNLTY+ PL
Sbjct: 62 VGYDEANFDETMNSTTKKVFEVKFGQVYLSKPTTVEKDGTVTNMFPHEARLRNLTYAAPL 121
[34][TOP]
>UniRef100_A9BK63 DNA-directed RNA polymerase n=1 Tax=Cryptophyta RepID=A9BK63_9CRYP
Length = 1222
Score = 110 bits (275), Expect = 6e-23
Identities = 53/112 (47%), Positives = 75/112 (66%)
Frame = +2
Query: 197 DPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYV 376
D ND I +D W ++ ++F E+ LVRQQL S+NEF+ TMQ ++D+ P IV+ E
Sbjct: 4 DKNDEIIKQDDMWIILESFFKENNLVRQQLDSFNEFIQNTMQDIIDDIPPIVIKTEFDKF 63
Query: 377 PGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
+ ++ K++++FGQL +SKP F E NG TL PN+ARLRNLTYS+PL
Sbjct: 64 KSSETK-KSLKLILRFGQLHLSKPTFIEENGTTHTLLPNEARLRNLTYSSPL 114
[35][TOP]
>UniRef100_UPI00015B44D8 PREDICTED: similar to ENSANGP00000011389 n=1 Tax=Nasonia
vitripennis RepID=UPI00015B44D8
Length = 1175
Score = 109 bits (273), Expect = 1e-22
Identities = 59/121 (48%), Positives = 81/121 (66%), Gaps = 4/121 (3%)
Frame = +2
Query: 182 DEEYEDPNDADISA----EDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDI 349
+E YED + +IS+ E W VINAYFDE GLVRQQL S++EF+ +++QR+V+ESP I
Sbjct: 6 EEHYEDDDSEEISSKVWQEACWIVINAYFDEKGLVRQQLDSFDEFIEMSVQRIVEESPQI 65
Query: 350 VLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTP 529
L E Q+ G + T+ ++KF Q+ +SKP E +G + PN+ARLRNLTYS P
Sbjct: 66 DLQAEAQHRTG--DIETPTRHLVKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTYSAP 123
Query: 530 L 532
L
Sbjct: 124 L 124
[36][TOP]
>UniRef100_Q4YWL7 Putative uncharacterized protein (Fragment) n=1 Tax=Plasmodium
berghei RepID=Q4YWL7_PLABE
Length = 467
Score = 109 bits (273), Expect = 1e-22
Identities = 55/123 (44%), Positives = 80/123 (65%), Gaps = 6/123 (4%)
Frame = +2
Query: 182 DEEYEDPNDAD----ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDI 349
D+ ED +D D I+ ED+W VI ++F HGLV QQ++SYN+F+ MQ ++DE P+I
Sbjct: 18 DQNLEDVSDKDDDDQITEEDSWIVIGSFFGSHGLVNQQIESYNDFIEYRMQEIIDEHPNI 77
Query: 350 VLIPEDQYVPGRDAPDENTKVV--IKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYS 523
+ P+ QY P + DEN ++ +KFGQL + +P F E N L+P +ARLRNLTYS
Sbjct: 78 EIKPQPQYRPDK---DENNNIIYSLKFGQLSLDRPFFDEKNLVNKNLWPQEARLRNLTYS 134
Query: 524 TPL 532
+ +
Sbjct: 135 SAI 137
[37][TOP]
>UniRef100_B0WKE9 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
RepID=B0WKE9_CULQU
Length = 1176
Score = 109 bits (273), Expect = 1e-22
Identities = 61/128 (47%), Positives = 83/128 (64%), Gaps = 2/128 (1%)
Frame = +2
Query: 155 NEDGVYNGVDEEYEDPNDA--DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRL 328
NEDG + E EDP + ++ E W VINAYFDE GLVRQQL S++EF+ +++QR+
Sbjct: 4 NEDGDHF----EEEDPEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRI 59
Query: 329 VDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLR 508
V++SP I L E Q+ G + T+ V+KF Q+ +SKP E +G + PN+ARLR
Sbjct: 60 VEDSPAIELTAEAQHTTG--DIETPTRYVLKFDQIYLSKPTHWEKDGSPSPMMPNEARLR 117
Query: 509 NLTYSTPL 532
NLTYS PL
Sbjct: 118 NLTYSAPL 125
[38][TOP]
>UniRef100_Q7RQI2 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii
RepID=Q7RQI2_PLAYO
Length = 1312
Score = 109 bits (272), Expect = 1e-22
Identities = 55/123 (44%), Positives = 80/123 (65%), Gaps = 6/123 (4%)
Frame = +2
Query: 182 DEEYEDPNDAD----ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDI 349
D+ ED +D D I+ ED+W VI ++F HGLV QQ++SYN+F+ MQ ++DE P+I
Sbjct: 18 DQNIEDVSDKDDEDQITEEDSWIVIGSFFGSHGLVNQQIESYNDFIEYRMQEIIDEHPNI 77
Query: 350 VLIPEDQYVPGRDAPDENTKVV--IKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYS 523
+ P+ QY P + DEN ++ +KFGQL + +P F E N L+P +ARLRNLTYS
Sbjct: 78 EIKPQPQYRPDK---DENNNIIYSLKFGQLSLDRPFFDEKNLINKNLWPQEARLRNLTYS 134
Query: 524 TPL 532
+ +
Sbjct: 135 SAI 137
[39][TOP]
>UniRef100_UPI0000221AC5 hypothetical protein CBG18197 n=1 Tax=Caenorhabditis briggsae AF16
RepID=UPI0000221AC5
Length = 1194
Score = 108 bits (271), Expect = 2e-22
Identities = 63/133 (47%), Positives = 87/133 (65%), Gaps = 4/133 (3%)
Frame = +2
Query: 146 DSGNEDGVYNGVDEEYEDPNDADISA----EDAWEVINAYFDEHGLVRQQLQSYNEFVSV 313
D G +D +G DEEY D A+IS E W VI+AYFDE GLVRQQL S++EFV +
Sbjct: 6 DDGMQD---DGNDEEYSDET-AEISPDAWQEACWVVISAYFDEKGLVRQQLDSFDEFVQM 61
Query: 314 TMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPN 493
+QR+V++SP + L E+Q++ G D + K +KF Q+ +SKP E +G + PN
Sbjct: 62 NVQRIVEDSPPVELQSENQHL-GNDM-ENPAKFSLKFNQIYLSKPTHWEKDGAPMPMMPN 119
Query: 494 QARLRNLTYSTPL 532
+ARLRNLTY++PL
Sbjct: 120 EARLRNLTYASPL 132
[40][TOP]
>UniRef100_B6AET6 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
RepID=B6AET6_9CRYT
Length = 1184
Score = 108 bits (271), Expect = 2e-22
Identities = 50/109 (45%), Positives = 76/109 (69%)
Frame = +2
Query: 206 DADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGR 385
D ++ ED+W +I YF + GLV QQL+S+N+F+ +Q +VDE P IV+IP+ QY P
Sbjct: 7 DDEVQQEDSWALIGTYFRDRGLVSQQLESFNDFIMYKLQEIVDEHPPIVIIPQPQYRPDE 66
Query: 386 DAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
D + + V+KFGQL +S+P+ E G A L+P++ARLR+LTY++P+
Sbjct: 67 QI-DTSIQYVLKFGQLSLSRPSVEEREGVARGLWPSEARLRSLTYASPV 114
[41][TOP]
>UniRef100_B4R0H5 DNA-directed RNA polymerase n=1 Tax=Drosophila simulans
RepID=B4R0H5_DROSI
Length = 1176
Score = 108 bits (269), Expect = 3e-22
Identities = 58/126 (46%), Positives = 81/126 (64%), Gaps = 4/126 (3%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDADIS----AEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVD 334
+Y+ +E YE+ N +IS E W VINAYFDE GLVRQQL S++EF+ +++QR+V+
Sbjct: 2 MYDNEEELYEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE 61
Query: 335 ESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNL 514
+SP I L E Q+ G + + +KF Q+ +SKP E +G + PN+ARLRNL
Sbjct: 62 DSPAIELQAEAQHTSGE--VETPPRFSLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNL 119
Query: 515 TYSTPL 532
TYS PL
Sbjct: 120 TYSAPL 125
[42][TOP]
>UniRef100_B4PTC0 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4PTC0_DROYA
Length = 1176
Score = 108 bits (269), Expect = 3e-22
Identities = 58/126 (46%), Positives = 81/126 (64%), Gaps = 4/126 (3%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDADIS----AEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVD 334
+Y+ +E YE+ N +IS E W VINAYFDE GLVRQQL S++EF+ +++QR+V+
Sbjct: 2 MYDNEEELYEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE 61
Query: 335 ESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNL 514
+SP I L E Q+ G + + +KF Q+ +SKP E +G + PN+ARLRNL
Sbjct: 62 DSPAIELQAEAQHTSGE--VETPPRFSLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNL 119
Query: 515 TYSTPL 532
TYS PL
Sbjct: 120 TYSAPL 125
[43][TOP]
>UniRef100_B4N9I3 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4N9I3_DROWI
Length = 1176
Score = 108 bits (269), Expect = 3e-22
Identities = 58/126 (46%), Positives = 81/126 (64%), Gaps = 4/126 (3%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDADIS----AEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVD 334
+Y+ +E YE+ N +IS E W VINAYFDE GLVRQQL S++EF+ +++QR+V+
Sbjct: 2 MYDNEEELYEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE 61
Query: 335 ESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNL 514
+SP I L E Q+ G + + +KF Q+ +SKP E +G + PN+ARLRNL
Sbjct: 62 DSPAIELQAEAQHTSGE--VETPPRFSLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNL 119
Query: 515 TYSTPL 532
TYS PL
Sbjct: 120 TYSAPL 125
[44][TOP]
>UniRef100_B3P0M0 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3P0M0_DROER
Length = 1176
Score = 108 bits (269), Expect = 3e-22
Identities = 58/126 (46%), Positives = 81/126 (64%), Gaps = 4/126 (3%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDADIS----AEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVD 334
+Y+ +E YE+ N +IS E W VINAYFDE GLVRQQL S++EF+ +++QR+V+
Sbjct: 2 MYDNEEELYEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE 61
Query: 335 ESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNL 514
+SP I L E Q+ G + + +KF Q+ +SKP E +G + PN+ARLRNL
Sbjct: 62 DSPAIELQAEAQHTSGE--VETPPRFSLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNL 119
Query: 515 TYSTPL 532
TYS PL
Sbjct: 120 TYSAPL 125
[45][TOP]
>UniRef100_B3LYR3 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3LYR3_DROAN
Length = 1176
Score = 108 bits (269), Expect = 3e-22
Identities = 58/126 (46%), Positives = 81/126 (64%), Gaps = 4/126 (3%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDADIS----AEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVD 334
+Y+ +E YE+ N +IS E W VINAYFDE GLVRQQL S++EF+ +++QR+V+
Sbjct: 2 MYDNEEELYEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE 61
Query: 335 ESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNL 514
+SP I L E Q+ G + + +KF Q+ +SKP E +G + PN+ARLRNL
Sbjct: 62 DSPAIELQAEAQHTSGE--VETPPRFSLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNL 119
Query: 515 TYSTPL 532
TYS PL
Sbjct: 120 TYSAPL 125
[46][TOP]
>UniRef100_A8PVJ8 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
RepID=A8PVJ8_MALGO
Length = 1197
Score = 108 bits (269), Expect = 3e-22
Identities = 55/114 (48%), Positives = 75/114 (65%)
Frame = +2
Query: 191 YEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQ 370
YED +IS ED W+VI A+F+E GLVRQQ+ S+NEF+S T+Q LV+ES + L DQ
Sbjct: 2 YEDEGVEEISQEDCWDVIKAFFEEKGLVRQQIDSFNEFMSNTVQELVEESKSLTLEQSDQ 61
Query: 371 YVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
+ A D+ + I+FGQ+ ++KP TE +G L+P +AR RNLTYS L
Sbjct: 62 HT--GQAEDKTRRYEIEFGQIYMNKPQQTEADGSTAPLFPQEARQRNLTYSAGL 113
[47][TOP]
>UniRef100_P08266 DNA-directed RNA polymerase II subunit RPB2 n=2 Tax=melanogaster
subgroup RepID=RPB2_DROME
Length = 1176
Score = 108 bits (269), Expect = 3e-22
Identities = 58/126 (46%), Positives = 81/126 (64%), Gaps = 4/126 (3%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDADIS----AEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVD 334
+Y+ +E YE+ N +IS E W VINAYFDE GLVRQQL S++EF+ +++QR+V+
Sbjct: 2 MYDNEEELYEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE 61
Query: 335 ESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNL 514
+SP I L E Q+ G + + +KF Q+ +SKP E +G + PN+ARLRNL
Sbjct: 62 DSPAIELQAEAQHTSGE--VETPPRFSLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNL 119
Query: 515 TYSTPL 532
TYS PL
Sbjct: 120 TYSAPL 125
[48][TOP]
>UniRef100_UPI0000D5712C PREDICTED: similar to AGAP003648-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D5712C
Length = 1175
Score = 107 bits (267), Expect = 5e-22
Identities = 55/126 (43%), Positives = 83/126 (65%), Gaps = 4/126 (3%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDADISAE----DAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVD 334
+Y +++++D +IS+E W VINAYFDE GLVRQQL S++EF+ +++QR+V+
Sbjct: 1 MYEQDEDQFDDEESEEISSELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE 60
Query: 335 ESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNL 514
+SP I L E Q+ G + ++ ++KF Q+ +SKP E +G + PN+ARLRNL
Sbjct: 61 DSPQIDLQAEAQHTSGE--LENPSRYLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNL 118
Query: 515 TYSTPL 532
TYS PL
Sbjct: 119 TYSAPL 124
[49][TOP]
>UniRef100_Q7QAK7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7QAK7_ANOGA
Length = 1175
Score = 107 bits (267), Expect = 5e-22
Identities = 56/117 (47%), Positives = 78/117 (66%), Gaps = 2/117 (1%)
Frame = +2
Query: 188 EYEDPNDA--DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
E EDP + ++ E W VINAYFDE GLVRQQL S++EF+ +++QR+V++SP I L
Sbjct: 10 EEEDPEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVEDSPAIELTA 69
Query: 362 EDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
E Q+ G + T+ ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 70 EAQHSSGE--IENPTRYLLKFDQIYLSKPTHWEKDGSPSPMMPNEARLRNLTYSAPL 124
[50][TOP]
>UniRef100_UPI0001926137 PREDICTED: similar to predicted protein n=1 Tax=Hydra
magnipapillata RepID=UPI0001926137
Length = 1426
Score = 107 bits (266), Expect = 7e-22
Identities = 58/134 (43%), Positives = 85/134 (63%)
Frame = +2
Query: 131 LYDMSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVS 310
+YD D +D Y+ +E+ D ++ E W VI++YF+E GLVRQQL S++EF+
Sbjct: 1 MYDPIDE--DDDHYDNTEED--DEISKELWQEACWTVISSYFEEKGLVRQQLDSFDEFIQ 56
Query: 311 VTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYP 490
+++QR+V+ESP I L E QY + +E T+ +KF Q+ +SKP E +G + P
Sbjct: 57 MSVQRIVEESPPIELQAETQYT--ENEIEEPTRYQLKFEQIYLSKPTHWEKDGAPKPMMP 114
Query: 491 NQARLRNLTYSTPL 532
N+ARLRNLTYS PL
Sbjct: 115 NEARLRNLTYSAPL 128
[51][TOP]
>UniRef100_C1ML14 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1ML14_9CHLO
Length = 1172
Score = 107 bits (266), Expect = 7e-22
Identities = 56/114 (49%), Positives = 72/114 (63%), Gaps = 2/114 (1%)
Frame = +2
Query: 197 DPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRL-VDESPDIVLIPEDQY 373
+ D +I EDAW VI+++F+E GL RQQL S+NEF+ MQ + VDE L PE Q+
Sbjct: 7 EEEDEEIGQEDAWTVISSFFEEKGLARQQLDSFNEFIQHAMQEIVVDEMSSFELEPEQQH 66
Query: 374 VPGRDAPDENTKVV-IKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
VPG + K I F Q+ +SKP TE +G TL+P +ARLRNLTYS PL
Sbjct: 67 VPGEEGEGGEKKTYKISFKQIYLSKPMVTEADGMTSTLFPKEARLRNLTYSAPL 120
[52][TOP]
>UniRef100_B4K015 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4K015_DROGR
Length = 1175
Score = 107 bits (266), Expect = 7e-22
Identities = 57/126 (45%), Positives = 80/126 (63%), Gaps = 4/126 (3%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDADIS----AEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVD 334
+Y +E +E+ N +IS E W VINAYFDE GLVRQQL S++EF+ +++QR+V+
Sbjct: 1 MYENEEENFEEENVEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE 60
Query: 335 ESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNL 514
+SP I L E Q+ G + + +KF Q+ +SKP E +G + PN+ARLRNL
Sbjct: 61 DSPAIELQAEAQHTSGE--VETPPRFSLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNL 118
Query: 515 TYSTPL 532
TYS PL
Sbjct: 119 TYSAPL 124
[53][TOP]
>UniRef100_Q4Y5W4 DNA-directed RNA polymerase II second largest subunit, putative
(Fragment) n=1 Tax=Plasmodium chabaudi
RepID=Q4Y5W4_PLACH
Length = 727
Score = 106 bits (265), Expect = 9e-22
Identities = 53/121 (43%), Positives = 80/121 (66%), Gaps = 2/121 (1%)
Frame = +2
Query: 176 GVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVL 355
G+++ + +D I+ ED+W VI ++F HGLV QQ++SYN+F+ MQ ++DE P I +
Sbjct: 18 GIEDLSDKDDDDQINEEDSWVVIGSFFG-HGLVNQQIESYNDFIEYRMQEIIDEHPHIEI 76
Query: 356 IPEDQYVPGRDAPDENTKVV--IKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTP 529
P+ QY P + DENT ++ +KFGQL + +P F E N L+P +ARLRNLTYS+
Sbjct: 77 KPQPQYRPDK---DENTNIIYSLKFGQLSLDRPFFDEKNLVNKNLWPQEARLRNLTYSSA 133
Query: 530 L 532
+
Sbjct: 134 I 134
[54][TOP]
>UniRef100_B4KDW5 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4KDW5_DROMO
Length = 1176
Score = 106 bits (265), Expect = 9e-22
Identities = 56/126 (44%), Positives = 81/126 (64%), Gaps = 4/126 (3%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDADIS----AEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVD 334
+Y+ +E +++ N +IS E W VINAYFDE GLVRQQL S++EF+ +++QR+V+
Sbjct: 2 MYDNEEENFDEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE 61
Query: 335 ESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNL 514
+SP I L E Q+ G + + +KF Q+ +SKP E +G + PN+ARLRNL
Sbjct: 62 DSPAIELQAEAQHTSGE--VETPPRFSLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNL 119
Query: 515 TYSTPL 532
TYS PL
Sbjct: 120 TYSAPL 125
[55][TOP]
>UniRef100_Q298X6 DNA-directed RNA polymerase n=2 Tax=pseudoobscura subgroup
RepID=Q298X6_DROPS
Length = 1176
Score = 106 bits (265), Expect = 9e-22
Identities = 57/126 (45%), Positives = 81/126 (64%), Gaps = 4/126 (3%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDADIS----AEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVD 334
+Y+ +E +E+ N +IS E W VINAYFDE GLVRQQL S++EF+ +++QR+V+
Sbjct: 2 MYDNEEELFEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE 61
Query: 335 ESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNL 514
+SP I L E Q+ G + + +KF Q+ +SKP E +G + PN+ARLRNL
Sbjct: 62 DSPAIELQAEAQHTSGE--VETPPRFSLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNL 119
Query: 515 TYSTPL 532
TYS PL
Sbjct: 120 TYSAPL 125
[56][TOP]
>UniRef100_B4M040 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
RepID=B4M040_DROVI
Length = 1176
Score = 106 bits (264), Expect = 1e-21
Identities = 56/126 (44%), Positives = 80/126 (63%), Gaps = 4/126 (3%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDADIS----AEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVD 334
+Y +E +++ N +IS E W VINAYFDE GLVRQQL S++EF+ +++QR+V+
Sbjct: 2 MYENEEENFDEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE 61
Query: 335 ESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNL 514
+SP I L E Q+ G + + +KF Q+ +SKP E +G + PN+ARLRNL
Sbjct: 62 DSPAIELQAEAQHTSGE--VETPPRFSLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNL 119
Query: 515 TYSTPL 532
TYS PL
Sbjct: 120 TYSAPL 125
[57][TOP]
>UniRef100_Q10578 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Caenorhabditis
elegans RepID=RPB2_CAEEL
Length = 1193
Score = 106 bits (264), Expect = 1e-21
Identities = 61/133 (45%), Positives = 84/133 (63%), Gaps = 11/133 (8%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDAD-------ISAED----AWEVINAYFDEHGLVRQQLQSYNEFVSV 313
+Y+ DE DP D D ISAE W VI+AYFDE GLVRQQL S++EFV +
Sbjct: 1 MYDDEDEMVNDPMDGDYIDDSDEISAEAWQEACWVVISAYFDEKGLVRQQLDSFDEFVQM 60
Query: 314 TMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPN 493
+QR+V++SP + L E+Q++ G D + K +KF Q+ +SKP E +G + PN
Sbjct: 61 NVQRIVEDSPPVELQSENQHL-GTDM-ENPAKFSLKFNQIYLSKPTHWEKDGAPMPMMPN 118
Query: 494 QARLRNLTYSTPL 532
+ARLRNLTY++PL
Sbjct: 119 EARLRNLTYASPL 131
[58][TOP]
>UniRef100_A5KBW7 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax
RepID=A5KBW7_PLAVI
Length = 1339
Score = 105 bits (263), Expect = 2e-21
Identities = 52/125 (41%), Positives = 78/125 (62%), Gaps = 2/125 (1%)
Frame = +2
Query: 164 GVYNGVDEEYEDPNDAD--ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDE 337
G Y D E+ ++ + I+ ED+W VI ++F HGLV QQ++SYN+F+ MQ ++DE
Sbjct: 12 GEYMHADAPLEEDHEEEERITEEDSWVVIGSFFGSHGLVNQQIESYNDFIEYRMQEIIDE 71
Query: 338 SPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLT 517
P I + P+ QY RD ++N +KFGQL + +P + E N L+P +ARLRNLT
Sbjct: 72 HPQIEIRPQPQYRSDRD-DNKNVMYALKFGQLSLDRPFYDERNLTNKNLWPQEARLRNLT 130
Query: 518 YSTPL 532
YS+ +
Sbjct: 131 YSSAI 135
[59][TOP]
>UniRef100_Q6RYH8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Filobasidiella
neoformans RepID=Q6RYH8_CRYNE
Length = 1114
Score = 105 bits (263), Expect = 2e-21
Identities = 54/114 (47%), Positives = 73/114 (64%)
Frame = +2
Query: 191 YEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQ 370
Y+ +D IS ED W V N++F+E GLVRQQL+S+NEF+ TMQ +VD+ + L Q
Sbjct: 32 YDVDDDEPISQEDYWTVTNSFFEEKGLVRQQLESFNEFIETTMQEIVDDHSRLTLDQFTQ 91
Query: 371 YVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
Y A DE + I FGQ+ +++ N TE +G L+P +ARLRNLTYS PL
Sbjct: 92 YT--GVAGDETRRYEISFGQIYLARVNHTEMDGRTNMLFPQEARLRNLTYSAPL 143
[60][TOP]
>UniRef100_UPI000155BCC7 PREDICTED: similar to RNA polymerase II 140 kDa subunit, partial
n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BCC7
Length = 951
Score = 105 bits (261), Expect = 3e-21
Identities = 54/121 (44%), Positives = 81/121 (66%), Gaps = 3/121 (2%)
Frame = +2
Query: 179 VDEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDI 349
VD +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 6 VDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPI 65
Query: 350 VLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTP 529
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS P
Sbjct: 66 DLQAEAQHATGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAP 123
Query: 530 L 532
L
Sbjct: 124 L 124
[61][TOP]
>UniRef100_Q6CAD6 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6CAD6_YARLI
Length = 1229
Score = 105 bits (261), Expect = 3e-21
Identities = 53/119 (44%), Positives = 77/119 (64%), Gaps = 4/119 (3%)
Frame = +2
Query: 188 EYEDP----NDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVL 355
EYEDP D +I+AED W VI+++F+E GLV QQL S++EF+ T+Q LV E ++L
Sbjct: 3 EYEDPYGYYEDTEITAEDCWTVISSFFNEKGLVSQQLDSFDEFIETTIQELVWEDRTLIL 62
Query: 356 IPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
Q+ D ++N + I FG++ +S+P TE +G +YP +AR RNLTYS+PL
Sbjct: 63 DQPAQHTTPND--NQNKRFEITFGKIYLSRPTMTEADGSTHPMYPQEARARNLTYSSPL 119
[62][TOP]
>UniRef100_Q27826 DNA-directed RNA polymerase n=1 Tax=Euplotes octocarinatus
RepID=Q27826_EUPOC
Length = 1194
Score = 104 bits (260), Expect = 3e-21
Identities = 59/130 (45%), Positives = 82/130 (63%), Gaps = 2/130 (1%)
Frame = +2
Query: 149 SGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRL 328
SG YN +++ D +I+ EDAW VI AYFD+HGLV QQ+ S++ F+S T+Q +
Sbjct: 14 SGGRGDYYN----QHKMDIDDEITQEDAWAVIRAYFDQHGLVSQQISSFDRFLSYTVQDI 69
Query: 329 VDESPDIVLIPEDQYVPG-RDAPDENTKVVIKFGQLRVS-KPNFTENNGEAXTLYPNQAR 502
V E+ I + PE Q+ PG + EN K I GQ+RV+ KP F E + + ++PN+AR
Sbjct: 70 VTENNTISIQPELQFAPGSMNESRENIKYDIILGQVRVNEKPRFKEFDDKYNVIFPNEAR 129
Query: 503 LRNLTYSTPL 532
LRNLTY T L
Sbjct: 130 LRNLTYQTSL 139
[63][TOP]
>UniRef100_UPI00006A01AA DNA-directed RNA polymerase II subunit RPB2 (EC 2.7.7.6) (RNA
polymerase II subunit B2) (DNA-directed RNA polymerase
II subunit B) (RNA polymerase II subunit 2)
(DNA-directed RNA polymerase II 140 kDa polypeptide).
n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI00006A01AA
Length = 927
Score = 103 bits (258), Expect = 6e-21
Identities = 53/121 (43%), Positives = 81/121 (66%), Gaps = 3/121 (2%)
Frame = +2
Query: 179 VDEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDI 349
+D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 6 LDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPI 65
Query: 350 VLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTP 529
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS P
Sbjct: 66 DLQAEAQHTTGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAP 123
Query: 530 L 532
L
Sbjct: 124 L 124
[64][TOP]
>UniRef100_UPI000194C2A3 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide B, 140kDa
n=1 Tax=Taeniopygia guttata RepID=UPI000194C2A3
Length = 1174
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[65][TOP]
>UniRef100_UPI0001795E58 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB2
(RNA polymerase II subunit B2) (DNA-directed RNA
polymerase II subunit B) (RNA polymerase II subunit 2)
(DNA-directed RNA polymerase II 140 kDa polypeptide) n=1
Tax=Equus caballus RepID=UPI0001795E58
Length = 1174
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[66][TOP]
>UniRef100_UPI0000F2D75F PREDICTED: similar to RNA polymerase II 140 kDa subunit n=1
Tax=Monodelphis domestica RepID=UPI0000F2D75F
Length = 1174
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHATGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[67][TOP]
>UniRef100_P30876 DNA-directed RNA polymerase II subunit RPB2 n=2 Tax=Catarrhini
RepID=RPB2_HUMAN
Length = 1174
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[68][TOP]
>UniRef100_UPI00005A2A5C PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
16 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5C
Length = 1173
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[69][TOP]
>UniRef100_UPI00005A2A5B PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
15 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5B
Length = 1179
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[70][TOP]
>UniRef100_UPI00005A2A5A PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
14 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5A
Length = 1175
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[71][TOP]
>UniRef100_UPI00005A2A59 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
13 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A59
Length = 1180
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[72][TOP]
>UniRef100_UPI00005A2A58 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
12 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A58
Length = 1174
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[73][TOP]
>UniRef100_UPI00005A2A57 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
11 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A57
Length = 1180
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[74][TOP]
>UniRef100_UPI00005A2A56 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
10 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A56
Length = 1166
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[75][TOP]
>UniRef100_UPI00005A2A55 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
9 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A55
Length = 1182
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[76][TOP]
>UniRef100_UPI00005A2A54 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
8 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A54
Length = 1173
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[77][TOP]
>UniRef100_UPI00005A2A53 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
7 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A53
Length = 1113
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[78][TOP]
>UniRef100_UPI00005A2A52 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
6 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A52
Length = 1162
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[79][TOP]
>UniRef100_UPI00005A2A51 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
5 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A51
Length = 932
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[80][TOP]
>UniRef100_UPI00005A2A4F PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide B isoform 3 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A2A4F
Length = 193
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[81][TOP]
>UniRef100_UPI0000EB23D9 DNA-directed RNA polymerase II subunit RPB2 (EC 2.7.7.6) (RNA
polymerase II subunit B2) (DNA-directed RNA polymerase
II subunit B) (RNA polymerase II subunit 2)
(DNA-directed RNA polymerase II 140 kDa polypeptide).
n=1 Tax=Canis lupus familiaris RepID=UPI0000EB23D9
Length = 1176
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[82][TOP]
>UniRef100_UPI0000F3357E UPI0000F3357E related cluster n=1 Tax=Bos taurus
RepID=UPI0000F3357E
Length = 1177
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 8 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 67
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 68 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 125
[83][TOP]
>UniRef100_UPI0000ECC4A8 polymerase (RNA) II (DNA directed) polypeptide B, 140kDa n=1
Tax=Gallus gallus RepID=UPI0000ECC4A8
Length = 1176
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 8 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 67
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 68 LQAEAQHATGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 125
[84][TOP]
>UniRef100_UPI00003AD7E4 polymerase (RNA) II (DNA directed) polypeptide B, 140kDa n=1
Tax=Gallus gallus RepID=UPI00003AD7E4
Length = 1174
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHATGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[85][TOP]
>UniRef100_Q6PA46 MGC68569 protein n=1 Tax=Xenopus laevis RepID=Q6PA46_XENLA
Length = 949
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHTTGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[86][TOP]
>UniRef100_Q5ZMN9 DNA-directed RNA polymerase n=1 Tax=Gallus gallus
RepID=Q5ZMN9_CHICK
Length = 1174
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEARWIVISSYFDEEGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHATGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[87][TOP]
>UniRef100_A5PJW8 DNA-directed RNA polymerase n=1 Tax=Bos taurus RepID=A5PJW8_BOVIN
Length = 1174
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[88][TOP]
>UniRef100_B3S2W9 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
RepID=B3S2W9_TRIAD
Length = 1196
Score = 103 bits (257), Expect = 8e-21
Identities = 53/122 (43%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Frame = +2
Query: 170 YNGVDEEYEDPN-DADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPD 346
Y+ D+ +D + D+ E W VINAYF+E GLVRQQL S++EF+ +++QR+V++SP
Sbjct: 7 YDLTDQPIDDDEIETDLWQEACWVVINAYFNEKGLVRQQLDSFDEFIQMSVQRIVEDSPQ 66
Query: 347 IVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYST 526
I + E Q+ + ++ + +KF Q+ +SKP F E +G + NQARLRNLTYS
Sbjct: 67 IDIQGETQHHSSEE--QQSVRYQLKFDQIYLSKPTFWEKDGSPTPMMSNQARLRNLTYSA 124
Query: 527 PL 532
PL
Sbjct: 125 PL 126
[89][TOP]
>UniRef100_A8MW88 DNA-directed RNA polymerase (Fragment) n=1 Tax=Homo sapiens
RepID=A8MW88_HUMAN
Length = 1173
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 6 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 65
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 66 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 123
[90][TOP]
>UniRef100_Q8CFI7 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Mus musculus
RepID=RPB2_MOUSE
Length = 1174
Score = 103 bits (257), Expect = 8e-21
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[91][TOP]
>UniRef100_UPI0001B09250 DNA directed RNA polymerase II polypeptide B n=1 Tax=Danio rerio
RepID=UPI0001B09250
Length = 1174
Score = 103 bits (256), Expect = 1e-20
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DIQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHTSGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[92][TOP]
>UniRef100_Q6DRH1 RNA polymerase II subunit B (Fragment) n=1 Tax=Danio rerio
RepID=Q6DRH1_DANRE
Length = 562
Score = 103 bits (256), Expect = 1e-20
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DIQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHTSGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[93][TOP]
>UniRef100_Q504C7 Polr2b protein n=1 Tax=Danio rerio RepID=Q504C7_DANRE
Length = 366
Score = 103 bits (256), Expect = 1e-20
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DIQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L E Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 67 LQAEAQHTSGE--VEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[94][TOP]
>UniRef100_B4DHJ3 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DHJ3_HUMAN
Length = 1167
Score = 103 bits (256), Expect = 1e-20
Identities = 52/116 (44%), Positives = 77/116 (66%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
+E +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I L E
Sbjct: 4 DEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDLQAE 63
Query: 365 DQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
Q+ G +E + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 64 AQHASGE--VEEPPRYLLKFEQIYLSKPTHRERDGAPSPMMPNEARLRNLTYSAPL 117
[95][TOP]
>UniRef100_A1D971 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1D971_NEOFI
Length = 1255
Score = 103 bits (256), Expect = 1e-20
Identities = 55/122 (45%), Positives = 80/122 (65%), Gaps = 5/122 (4%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
+EE+ D + I++ED W VI+++FD GLV QQL S++EF+S TMQ LV+E + L
Sbjct: 9 EEEFYDEMEEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTL-- 66
Query: 362 EDQYVPGRDAPDENTKVV-----IKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYST 526
DQ +P D DE+ VV +KFG + +S+P+ TE +G + P +ARLRNLTY++
Sbjct: 67 -DQTLPPSD--DEDDPVVLRRYELKFGTVMLSRPSVTEGDGATTIMLPQEARLRNLTYAS 123
Query: 527 PL 532
PL
Sbjct: 124 PL 125
[96][TOP]
>UniRef100_C0HA74 DNA-directed RNA polymerase n=1 Tax=Salmo salar RepID=C0HA74_SALSA
Length = 1174
Score = 102 bits (255), Expect = 1e-20
Identities = 52/116 (44%), Positives = 77/116 (66%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
+E ED D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I L E
Sbjct: 11 DEDEDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDLQAE 70
Query: 365 DQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
Q+ G ++ + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 71 AQHTSGE--VEDPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 124
[97][TOP]
>UniRef100_Q4U9X1 DNA-directed RNA polymerase n=1 Tax=Theileria annulata
RepID=Q4U9X1_THEAN
Length = 1223
Score = 102 bits (255), Expect = 1e-20
Identities = 48/114 (42%), Positives = 77/114 (67%), Gaps = 1/114 (0%)
Frame = +2
Query: 188 EYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPED 367
+Y +D + + ED W+VI ++F+EHGLV QQ++S+N+F++ MQ ++D P I + P+
Sbjct: 47 QYLKRDDENFTEEDTWKVIGSFFNEHGLVHQQIESFNDFITYRMQEIIDSHPPIEITPQP 106
Query: 368 QYVPGRDAPDENTKVV-IKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYST 526
Y P + EN+ V +KFGQL +SKP+ E +G ++P +ARLRNLTY++
Sbjct: 107 NYRPEEEV--ENSVVYKLKFGQLSLSKPSVEEKDGVFKHIWPQEARLRNLTYAS 158
[98][TOP]
>UniRef100_O96236 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7
RepID=O96236_PLAF7
Length = 1340
Score = 102 bits (255), Expect = 1e-20
Identities = 50/113 (44%), Positives = 74/113 (65%)
Frame = +2
Query: 194 EDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQY 373
++PN+ I+ +D+W VI ++F HGLV QQ++SYN+F+ MQ ++DE P I + P+ QY
Sbjct: 25 KNPNE-QITEDDSWVVIGSFFGSHGLVNQQIESYNDFIEYRMQEIIDEHPKIEIRPQPQY 83
Query: 374 VPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
RD D N +KFGQL + +P + E N L+P +ARLRNLTYS+ +
Sbjct: 84 RTDRDEND-NIIYSLKFGQLSLDRPFYDEKNLSNKNLWPQEARLRNLTYSSAI 135
[99][TOP]
>UniRef100_A7E6G0 DNA-directed RNA polymerase n=1 Tax=Sclerotinia sclerotiorum 1980
UF-70 RepID=A7E6G0_SCLS1
Length = 1267
Score = 102 bits (255), Expect = 1e-20
Identities = 56/119 (47%), Positives = 75/119 (63%), Gaps = 4/119 (3%)
Frame = +2
Query: 188 EYED--PNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
EY+D DA I+AED W VI+++FD GLV QQ+ S++EFV TMQ LV+E+ + L
Sbjct: 9 EYDDFGEEDAGITAEDCWTVISSFFDAKGLVSQQIDSFDEFVQTTMQELVEENSQLTL-- 66
Query: 362 EDQYVP--GRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
DQ P D P + IKFG + +S+P TE +G + P +ARLRNLTYS+PL
Sbjct: 67 -DQNNPPSSNDNPIALRRYEIKFGTIMLSRPAMTEGDGSTQVMLPQEARLRNLTYSSPL 124
[100][TOP]
>UniRef100_B6HM08 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum
Wisconsin 54-1255 RepID=B6HM08_PENCW
Length = 1255
Score = 102 bits (254), Expect = 2e-20
Identities = 54/122 (44%), Positives = 80/122 (65%), Gaps = 5/122 (4%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
+E++ D D I++ED W VI+++FD GLV QQL S++EF+S TMQ LV+E +VL
Sbjct: 9 EEDFYDEADEGITSEDCWTVISSFFDSKGLVSQQLDSFDEFISSTMQELVEEQGQVVL-- 66
Query: 362 EDQYVPGRDAPDENTKVVI-----KFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYST 526
DQ +P + DE +V+ KFG + +S+P+ TE +G + P +ARLRNLTY++
Sbjct: 67 -DQTLP--PSEDEIEPIVVRRYELKFGTVMLSRPSVTEGDGATTIMLPQEARLRNLTYAS 123
Query: 527 PL 532
PL
Sbjct: 124 PL 125
[101][TOP]
>UniRef100_A2QYC2 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2QYC2_ASPNC
Length = 1256
Score = 102 bits (254), Expect = 2e-20
Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 5/122 (4%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
++EY D D I++ED W VI+++FD GLV QQL S++EF+S TMQ LV+E + L
Sbjct: 9 EDEYYDDMDEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTL-- 66
Query: 362 EDQYVPGRDAPDENTKVVI-----KFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYST 526
DQ +P + DE VV+ KFG + +S+P+ TE +G + P +ARLRNLTY++
Sbjct: 67 -DQTLP--PSEDEVDPVVVRRYELKFGTVMLSRPSVTEGDGATTIMLPQEARLRNLTYAS 123
Query: 527 PL 532
PL
Sbjct: 124 PL 125
[102][TOP]
>UniRef100_Q2VA54 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum
RepID=Q2VA54_PHANO
Length = 1262
Score = 102 bits (253), Expect = 2e-20
Identities = 50/114 (43%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E+YED +I++ED W VI+++FD GLV QQL SY+EF T+Q +V E+ ++L
Sbjct: 10 EDYEDDEGGEITSEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQN 69
Query: 365 DQYVPGRDA-PDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYS 523
Y P D+ P + IKFG++ +++P TE +G L+P++ARLRNLTYS
Sbjct: 70 TPYDPDEDSDPIIKRRYEIKFGRVYLARPTHTEGDGTTVALFPHEARLRNLTYS 123
[103][TOP]
>UniRef100_Q1HDK3 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria sp. S-93-48
RepID=Q1HDK3_9PLEO
Length = 1262
Score = 102 bits (253), Expect = 2e-20
Identities = 50/114 (43%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E+YED +I++ED W VI+++FD GLV QQL SY+EF T+Q +V E+ ++L
Sbjct: 10 EDYEDEEGGEITSEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQN 69
Query: 365 DQYVPGRDA-PDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYS 523
Y P D+ P + IKFG++ +++P TE +G L+P++ARLRNLTYS
Sbjct: 70 TPYDPDEDSDPIIKRRYEIKFGRVYLARPTHTEGDGTTVALFPHEARLRNLTYS 123
[104][TOP]
>UniRef100_Q1HDK2 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria avenaria f. sp.
triticae RepID=Q1HDK2_9PLEO
Length = 1262
Score = 102 bits (253), Expect = 2e-20
Identities = 50/114 (43%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E+YED +I++ED W VI+++FD GLV QQL SY+EF T+Q +V E+ ++L
Sbjct: 10 EDYEDEEGGEITSEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQN 69
Query: 365 DQYVPGRDA-PDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYS 523
Y P D+ P + IKFG++ +++P TE +G L+P++ARLRNLTYS
Sbjct: 70 TPYDPDEDSDPIIKRRYEIKFGRVYLARPTHTEGDGTTVALFPHEARLRNLTYS 123
[105][TOP]
>UniRef100_Q1HDK1 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria avenaria f. sp.
triticae RepID=Q1HDK1_9PLEO
Length = 1262
Score = 102 bits (253), Expect = 2e-20
Identities = 50/114 (43%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E+YED +I++ED W VI+++FD GLV QQL SY+EF T+Q +V E+ ++L
Sbjct: 10 EDYEDDEGGEITSEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQN 69
Query: 365 DQYVPGRDA-PDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYS 523
Y P D+ P + IKFG++ +++P TE +G L+P++ARLRNLTYS
Sbjct: 70 TPYDPDEDSDPIIKRRYEIKFGRVYLARPTHTEGDGTTVALFPHEARLRNLTYS 123
[106][TOP]
>UniRef100_Q1HDJ9 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria avenaria f. sp.
triticae RepID=Q1HDJ9_9PLEO
Length = 1262
Score = 102 bits (253), Expect = 2e-20
Identities = 50/114 (43%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E+YED +I++ED W VI+++FD GLV QQL SY+EF T+Q +V E+ ++L
Sbjct: 10 EDYEDDEGGEITSEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQN 69
Query: 365 DQYVPGRDA-PDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYS 523
Y P D+ P + IKFG++ +++P TE +G L+P++ARLRNLTYS
Sbjct: 70 TPYDPDEDSDPIIKRRYEIKFGRVYLARPTHTEGDGTTVALFPHEARLRNLTYS 123
[107][TOP]
>UniRef100_Q1HDJ8 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum
RepID=Q1HDJ8_PHANO
Length = 1262
Score = 102 bits (253), Expect = 2e-20
Identities = 50/114 (43%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E+YED +I++ED W VI+++FD GLV QQL SY+EF T+Q +V E+ ++L
Sbjct: 10 EDYEDEEGGEITSEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQN 69
Query: 365 DQYVPGRDA-PDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYS 523
Y P D+ P + IKFG++ +++P TE +G L+P++ARLRNLTYS
Sbjct: 70 TPYDPDEDSDPIIKRRYEIKFGRVYLARPTHTEGDGTTVALFPHEARLRNLTYS 123
[108][TOP]
>UniRef100_Q1HDI7 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria avenaria f. sp.
avenaria RepID=Q1HDI7_9PLEO
Length = 1262
Score = 102 bits (253), Expect = 2e-20
Identities = 50/114 (43%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E+YED +I++ED W VI+++FD GLV QQL SY+EF T+Q +V E+ ++L
Sbjct: 10 EDYEDDEGGEITSEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQN 69
Query: 365 DQYVPGRDA-PDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYS 523
Y P D+ P + IKFG++ +++P TE +G L+P++ARLRNLTYS
Sbjct: 70 TPYDPDEDSDPIIKRRYEIKFGRVYLARPTHTEGDGTTVALFPHEARLRNLTYS 123
[109][TOP]
>UniRef100_Q1HDI5 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria avenaria f. sp.
avenaria RepID=Q1HDI5_9PLEO
Length = 1262
Score = 102 bits (253), Expect = 2e-20
Identities = 50/114 (43%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E+YED +I++ED W VI+++FD GLV QQL SY+EF T+Q +V E+ ++L
Sbjct: 10 EDYEDDEGGEITSEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQN 69
Query: 365 DQYVPGRDA-PDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYS 523
Y P D+ P + IKFG++ +++P TE +G L+P++ARLRNLTYS
Sbjct: 70 TPYDPDEDSDPIIKRRYEIKFGRVYLARPTHTEGDGTTVALFPHEARLRNLTYS 123
[110][TOP]
>UniRef100_Q0U9V8 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum
RepID=Q0U9V8_PHANO
Length = 1252
Score = 102 bits (253), Expect = 2e-20
Identities = 50/114 (43%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E+YED +I++ED W VI+++FD GLV QQL SY+EF T+Q +V E+ ++L
Sbjct: 10 EDYEDDEGGEITSEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQN 69
Query: 365 DQYVPGRDA-PDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYS 523
Y P D+ P + IKFG++ +++P TE +G L+P++ARLRNLTYS
Sbjct: 70 TPYDPDEDSDPIIKRRYEIKFGRVYLARPTHTEGDGTTVALFPHEARLRNLTYS 123
[111][TOP]
>UniRef100_B2ADP9 DNA-directed RNA polymerase n=2 Tax=Podospora anserina
RepID=B2ADP9_PODAN
Length = 1278
Score = 102 bits (253), Expect = 2e-20
Identities = 58/131 (44%), Positives = 78/131 (59%), Gaps = 2/131 (1%)
Frame = +2
Query: 146 DSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQR 325
D ++D Y DE D ++A I+ ED W+VI+AYFD GLV QQ+ S++EF S T+Q
Sbjct: 16 DEFDDDNNYENGDELGVDQDEAAITPEDCWDVISAYFDMKGLVSQQIDSFDEFTSSTIQS 75
Query: 326 LVDESPDIVLIPEDQYVPGRDAPDENT--KVVIKFGQLRVSKPNFTENNGEAXTLYPNQA 499
LVDE D+ L D PG D + + I FG + +SKP TE +GE +L P +
Sbjct: 76 LVDEYADLTL---DHPNPGDDQGRDIALRRYDIHFGNVMISKPTLTEISGETTSLLPYEC 132
Query: 500 RLRNLTYSTPL 532
R RNLTYS P+
Sbjct: 133 RDRNLTYSAPM 143
[112][TOP]
>UniRef100_A6S7C1 DNA-directed RNA polymerase n=2 Tax=Botryotinia fuckeliana
RepID=A6S7C1_BOTFB
Length = 1207
Score = 102 bits (253), Expect = 2e-20
Identities = 56/119 (47%), Positives = 75/119 (63%), Gaps = 4/119 (3%)
Frame = +2
Query: 188 EYED--PNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
EY+D DA I+AED W VI+++F+ GLV QQL S++EFV TMQ LV+E+ + L
Sbjct: 9 EYDDYGEEDAGITAEDCWTVISSFFEAKGLVSQQLDSFDEFVQTTMQELVEENSQLTL-- 66
Query: 362 EDQYVP--GRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
DQ P D P + IKFG + +S+P TE +G + P +ARLRNLTYS+PL
Sbjct: 67 -DQNNPPSSHDNPIALRRYEIKFGTIMLSRPAMTEGDGSTQVMLPQEARLRNLTYSSPL 124
[113][TOP]
>UniRef100_A1CG49 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
RepID=A1CG49_ASPCL
Length = 1257
Score = 102 bits (253), Expect = 2e-20
Identities = 56/122 (45%), Positives = 79/122 (64%), Gaps = 5/122 (4%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
+EE+ D + I++ED W VI+++FD GLV QQL S++EFVS TMQ LV+E + L
Sbjct: 9 EEEFYDDMEEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFVSSTMQELVEEQGQVTL-- 66
Query: 362 EDQYVPGRDAPDENTKVV-----IKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYST 526
DQ +P D DE VV +KFG + +S+P+ TE +G + P +ARLRNLTY++
Sbjct: 67 -DQTLPPAD--DEVDPVVLRRYELKFGTVMLSRPSVTEGDGATTIMLPQEARLRNLTYAS 123
Query: 527 PL 532
PL
Sbjct: 124 PL 125
[114][TOP]
>UniRef100_A8Q7K3 DNA-directed RNA polymerase n=1 Tax=Brugia malayi
RepID=A8Q7K3_BRUMA
Length = 1185
Score = 101 bits (252), Expect = 3e-20
Identities = 56/124 (45%), Positives = 79/124 (63%), Gaps = 7/124 (5%)
Frame = +2
Query: 182 DEEYEDP---NDADISAED----AWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDES 340
D+E E+ D +IS+E W VI+AYFDE GLVRQQL S++EF+ + +QR+V++S
Sbjct: 5 DDETEEALFEEDEEISSEQWQEACWVVISAYFDEKGLVRQQLDSFDEFIQMNVQRIVEDS 64
Query: 341 PDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTY 520
P + L E Q+ G + K +KF Q+ +SKP E +G + PN+ARLRNLTY
Sbjct: 65 PPVELQSEVQHFSG--DVENPIKFALKFDQIYLSKPTHWEKDGAPTPMMPNEARLRNLTY 122
Query: 521 STPL 532
S+PL
Sbjct: 123 SSPL 126
[115][TOP]
>UniRef100_UPI000186D6F3 DNA-directed RNA polymerase II 135 kDa polypeptide, putative n=1
Tax=Pediculus humanus corporis RepID=UPI000186D6F3
Length = 1175
Score = 101 bits (251), Expect = 4e-20
Identities = 53/122 (43%), Positives = 79/122 (64%), Gaps = 5/122 (4%)
Frame = +2
Query: 182 DEEYEDPNDA-----DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPD 346
+++YE+ DA ++ E W VIN+YFDE GLVRQQL S++EF+ +++QR+V+++P
Sbjct: 5 EDQYENDEDAGEISSELWQEACWIVINSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDTPI 64
Query: 347 IVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYST 526
I L E Q+ G + ++KF Q+ +SKP E +G + PN+ARLRNLTYS
Sbjct: 65 IDLQAEAQHASGE--IENPPHYLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTYSA 122
Query: 527 PL 532
PL
Sbjct: 123 PL 124
[116][TOP]
>UniRef100_Q4N2K9 DNA-directed RNA polymerase n=1 Tax=Theileria parva
RepID=Q4N2K9_THEPA
Length = 1190
Score = 101 bits (251), Expect = 4e-20
Identities = 50/134 (37%), Positives = 82/134 (61%), Gaps = 1/134 (0%)
Frame = +2
Query: 128 PLYDMSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFV 307
P YD+ + VDE + + ED W+VI ++F+EHGLV QQ++S+N+F+
Sbjct: 35 PKYDIDQDLDHSQYLKAVDENFTE--------EDTWKVIGSFFNEHGLVHQQIESFNDFI 86
Query: 308 SVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVV-IKFGQLRVSKPNFTENNGEAXTL 484
+ MQ ++D P I + P+ Y P + +EN+ + +KFGQL ++KP+ E +G +
Sbjct: 87 TYRMQEIIDAHPPIEITPQPNYRP--EEEEENSILYRLKFGQLSLNKPSVEEKDGVFKHI 144
Query: 485 YPNQARLRNLTYST 526
+P +ARLRNLTY++
Sbjct: 145 WPQEARLRNLTYAS 158
[117][TOP]
>UniRef100_B3L0J5 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H
RepID=B3L0J5_PLAKH
Length = 1371
Score = 100 bits (249), Expect = 6e-20
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 2/120 (1%)
Frame = +2
Query: 179 VDEEYEDPNDAD--ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
+D E+ +D + I+ ED+W VI ++F HGLV QQ++SYN+F+ MQ ++DE P +
Sbjct: 58 IDAPLEEDHDEEERITEEDSWVVIGSFFGSHGLVNQQIESYNDFIEYRMQEIIDEHPALE 117
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
+ P+ QY D +N +KFGQL + +P + E N L+P +ARLRNLTYS+ +
Sbjct: 118 IRPQAQYRSEGD-EQKNVMYALKFGQLSLDRPFYDERNLTNKNLWPQEARLRNLTYSSAI 176
[118][TOP]
>UniRef100_Q0CWW4 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
RepID=Q0CWW4_ASPTN
Length = 1256
Score = 100 bits (249), Expect = 6e-20
Identities = 53/122 (43%), Positives = 79/122 (64%), Gaps = 5/122 (4%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
++E+ D D I++ED W VI+++FD GLV QQL S++EF+S TMQ LV+E + L
Sbjct: 9 EDEFYDEMDEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTL-- 66
Query: 362 EDQYVPGRDAPDENTKVV-----IKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYST 526
DQ +P + DE +V +KFG + +S+P+ TE +G + P +ARLRNLTY++
Sbjct: 67 -DQTLPPNE--DEVDPIVLRRYELKFGTVMLSRPSVTEGDGATTIMLPQEARLRNLTYAS 123
Query: 527 PL 532
PL
Sbjct: 124 PL 125
[119][TOP]
>UniRef100_C8VK81 DNA-directed RNA polymerase (EC 2.7.7.6)
[Source:UniProtKB/TrEMBL;Acc:Q9UV95] n=2 Tax=Emericella
nidulans RepID=C8VK81_EMENI
Length = 1252
Score = 100 bits (249), Expect = 6e-20
Identities = 54/122 (44%), Positives = 79/122 (64%), Gaps = 5/122 (4%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
+EEY D D I++ED W VI+++FD GLV QQL S++EF+S T+Q LV+E + L
Sbjct: 9 EEEYYDDMDEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFISSTLQELVEEQGQVTL-- 66
Query: 362 EDQYVPGRDAPDENTKVVI-----KFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYST 526
DQ +P + DE VV+ KFG + +S+P E +G A + P++ARLRN+TY++
Sbjct: 67 -DQTIP--PSEDEVDPVVVRRYELKFGTVMLSRPMAMEGDGAATIMLPHEARLRNMTYAS 123
Query: 527 PL 532
PL
Sbjct: 124 PL 125
[120][TOP]
>UniRef100_B6K5Q5 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6K5Q5_SCHJY
Length = 1210
Score = 100 bits (249), Expect = 6e-20
Identities = 53/116 (45%), Positives = 75/116 (64%), Gaps = 2/116 (1%)
Frame = +2
Query: 191 YEDPN-DADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPED 367
YED + ++ ED W VI++YF+E+ L RQQL S++EFV TMQ +VD+ + L D
Sbjct: 3 YEDYQYNETLTQEDCWTVISSYFEENSLARQQLSSFDEFVQNTMQEIVDDDSTLTL---D 59
Query: 368 QYVPGRDAPDENT-KVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
QY A + T + I FGQ+ +S+P TE +G T++P +ARLRNLTYS+PL
Sbjct: 60 QYAQHTGAQGDYTRRYEINFGQIYLSRPTMTEADGSTTTMFPQEARLRNLTYSSPL 115
[121][TOP]
>UniRef100_B0YC08 DNA-directed RNA polymerase n=3 Tax=Aspergillus fumigatus
RepID=B0YC08_ASPFC
Length = 1255
Score = 100 bits (249), Expect = 6e-20
Identities = 53/122 (43%), Positives = 80/122 (65%), Gaps = 5/122 (4%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
++E+ D + I++ED W VI+++FD GLV QQL S++EF+S TMQ LV+E + L
Sbjct: 9 EDEFYDEMEEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTL-- 66
Query: 362 EDQYVPGRDAPDENTKVV-----IKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYST 526
DQ +P + DE+ VV +KFG + +S+P+ TE +G + P +ARLRNLTY++
Sbjct: 67 -DQTLP--PSEDEDDPVVLRRYELKFGTVMLSRPSVTEGDGATTIMLPQEARLRNLTYAS 123
Query: 527 PL 532
PL
Sbjct: 124 PL 125
[122][TOP]
>UniRef100_A5DVP4 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
RepID=A5DVP4_LODEL
Length = 1238
Score = 100 bits (249), Expect = 6e-20
Identities = 53/124 (42%), Positives = 78/124 (62%), Gaps = 7/124 (5%)
Frame = +2
Query: 182 DEEYEDPN--DADISA-----EDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDES 340
D+E +DP DAD+ A ED W VI+++F E GLV QQL S++EF+ T+Q LV E
Sbjct: 4 DQEMDDPYMYDADVEAQNITPEDCWTVISSFFQEKGLVSQQLDSFDEFIESTIQELVWED 63
Query: 341 PDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTY 520
++L Q+ +D +N + I FG++ +SKP TE +G ++P +ARLRNLTY
Sbjct: 64 SHLILDQPAQHTSEKD--HDNKRYEINFGKIYISKPTQTEGDGTTHPMFPQEARLRNLTY 121
Query: 521 STPL 532
S+P+
Sbjct: 122 SSPI 125
[123][TOP]
>UniRef100_B7QNH8 DNA-directed RNA polymerase n=1 Tax=Ixodes scapularis
RepID=B7QNH8_IXOSC
Length = 1142
Score = 100 bits (248), Expect = 8e-20
Identities = 51/116 (43%), Positives = 75/116 (64%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E+ + D+ E W VI+AYFDE GLVRQQL S++EF+ +++QR+V+++P I L E
Sbjct: 11 EDESEEITPDLWQEACWIVISAYFDEKGLVRQQLDSFDEFIQMSVQRIVEDTPQIDLQAE 70
Query: 365 DQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
Q+ G + + ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 71 AQHASGE--IENPPRYLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTYSAPL 124
[124][TOP]
>UniRef100_Q6QN96 DNA-directed RNA polymerase n=1 Tax=Cochliobolus heterostrophus
RepID=Q6QN96_COCHE
Length = 1208
Score = 100 bits (248), Expect = 8e-20
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 1/123 (0%)
Frame = +2
Query: 158 EDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDE 337
EDG+ ++YED D + ED W VI+++FD GLV QQL SY+EF T+Q +V E
Sbjct: 8 EDGM-----DDYEDEEDDRVLPEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKE 62
Query: 338 SPDIVLIPEDQYVPGR-DAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNL 514
+ ++L Y P D P + IKFG++ +++P TE +G LYP++ARLRNL
Sbjct: 63 NGSVILEQNTPYNPDEDDNPIIKRRYEIKFGRVYLARPTHTEGDGTTVQLYPHEARLRNL 122
Query: 515 TYS 523
TYS
Sbjct: 123 TYS 125
[125][TOP]
>UniRef100_UPI0000586387 PREDICTED: similar to RNA polymerase II subunit B, partial n=1
Tax=Strongylocentrotus purpuratus RepID=UPI0000586387
Length = 300
Score = 99.8 bits (247), Expect = 1e-19
Identities = 52/116 (44%), Positives = 75/116 (64%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
EE D D E W VI++YFDE GLVRQQL S++EF+ +++QR+V++SP + L E
Sbjct: 11 EEETDDLTPDQWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDSPAVDLQAE 70
Query: 365 DQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
Q++ + T+ ++KF Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 71 AQHMTTEQ--EVPTRYLLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNLTYSAPL 124
[126][TOP]
>UniRef100_P90631 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Moneuplotes crassus RepID=P90631_EUPCR
Length = 205
Score = 99.8 bits (247), Expect = 1e-19
Identities = 51/120 (42%), Positives = 77/120 (64%), Gaps = 10/120 (8%)
Frame = +2
Query: 197 DP-NDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQY 373
DP N +I+ EDAW +I AYF +HGLV QQ+ S++ F+S T+Q +V E+ + ++PE QY
Sbjct: 2 DPDNSKEITQEDAWALIKAYFQQHGLVSQQISSFDRFLSYTIQDIVAENSIMSIVPEKQY 61
Query: 374 VP--------GRDAPDENTKVVIKFGQLRVS-KPNFTENNGEAXTLYPNQARLRNLTYST 526
P G + D + + I+ GQ++V+ KP F E + + ++PN+ARLRNLTY T
Sbjct: 62 APGVRLYLTLGNENQDRDLRYEIELGQVKVNEKPRFKEYDDKYNVIFPNEARLRNLTYQT 121
[127][TOP]
>UniRef100_UPI0001865901 hypothetical protein BRAFLDRAFT_125505 n=1 Tax=Branchiostoma
floridae RepID=UPI0001865901
Length = 1176
Score = 99.4 bits (246), Expect = 1e-19
Identities = 55/125 (44%), Positives = 79/125 (63%), Gaps = 7/125 (5%)
Frame = +2
Query: 179 VDEEY----EDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDE 337
+DEEY ED D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V++
Sbjct: 4 IDEEYTYQEEDETDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVED 63
Query: 338 SPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLT 517
SP I L E Q++ + + ++ F Q+ +SKP E +G + PN+ARLRNLT
Sbjct: 64 SPQIDLQAEAQHLTME--AEVPPRYLLNFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLT 121
Query: 518 YSTPL 532
YS PL
Sbjct: 122 YSAPL 126
[128][TOP]
>UniRef100_C3Y5U9 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
RepID=C3Y5U9_BRAFL
Length = 1104
Score = 99.4 bits (246), Expect = 1e-19
Identities = 55/125 (44%), Positives = 79/125 (63%), Gaps = 7/125 (5%)
Frame = +2
Query: 179 VDEEY----EDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDE 337
+DEEY ED D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V++
Sbjct: 4 IDEEYTYQEEDETDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVED 63
Query: 338 SPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLT 517
SP I L E Q++ + + ++ F Q+ +SKP E +G + PN+ARLRNLT
Sbjct: 64 SPQIDLQAEAQHLTME--AEVPPRYLLNFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLT 121
Query: 518 YSTPL 532
YS PL
Sbjct: 122 YSAPL 126
[129][TOP]
>UniRef100_A8XS50 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae
RepID=A8XS50_CAEBR
Length = 1215
Score = 99.4 bits (246), Expect = 1e-19
Identities = 63/148 (42%), Positives = 87/148 (58%), Gaps = 19/148 (12%)
Frame = +2
Query: 146 DSGNEDGVYNGVDEEYEDPNDADISA----EDAWEVINAYFDE---------------HG 268
D G +D +G DEEY D A+IS E W VI+AYFDE G
Sbjct: 12 DDGMQD---DGNDEEYSDET-AEISPDAWQEACWVVISAYFDEKVNFGFFLIKTICMFQG 67
Query: 269 LVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKP 448
LVRQQL S++EFV + +QR+V++SP + L E+Q++ G D + K +KF Q+ +SKP
Sbjct: 68 LVRQQLDSFDEFVQMNVQRIVEDSPPVELQSENQHL-GNDM-ENPAKFSLKFNQIYLSKP 125
Query: 449 NFTENNGEAXTLYPNQARLRNLTYSTPL 532
E +G + PN+ARLRNLTY++PL
Sbjct: 126 THWEKDGAPMPMMPNEARLRNLTYASPL 153
[130][TOP]
>UniRef100_A7SHD8 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
RepID=A7SHD8_NEMVE
Length = 1182
Score = 99.4 bits (246), Expect = 1e-19
Identities = 51/118 (43%), Positives = 76/118 (64%)
Frame = +2
Query: 176 GVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVL 355
G E+ + D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V++SP+I L
Sbjct: 12 GYGEDEGEDITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDSPEIDL 71
Query: 356 IPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTP 529
E Q++ + + V+KF Q+ +SKP E +G + PN+ARLRNLTYS P
Sbjct: 72 QAESQHM--TSDTEIPARFVLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTYSAP 127
[131][TOP]
>UniRef100_Q5A8Y5 DNA-directed RNA polymerase n=2 Tax=Candida albicans
RepID=Q5A8Y5_CANAL
Length = 1234
Score = 99.4 bits (246), Expect = 1e-19
Identities = 53/122 (43%), Positives = 74/122 (60%), Gaps = 5/122 (4%)
Frame = +2
Query: 182 DEEYEDPNDAD-----ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPD 346
DE DP D I+ ED W VI ++F E GLV QQL S++EFV ++Q LV E
Sbjct: 4 DESMADPYQYDSIDEPITQEDCWTVITSFFQEKGLVSQQLDSFDEFVETSIQELVWEDSH 63
Query: 347 IVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYST 526
++L Q+ +D EN + I FG++ +SKP+ TE +G ++P +ARLRNLTYS+
Sbjct: 64 LILDQPAQHTSEKD--HENKRYEITFGKIYISKPSQTEGDGSTHAVFPQEARLRNLTYSS 121
Query: 527 PL 532
PL
Sbjct: 122 PL 123
[132][TOP]
>UniRef100_B9W6V2 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
RepID=B9W6V2_CANDC
Length = 1234
Score = 99.4 bits (246), Expect = 1e-19
Identities = 53/122 (43%), Positives = 74/122 (60%), Gaps = 5/122 (4%)
Frame = +2
Query: 182 DEEYEDPNDAD-----ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPD 346
DE DP D I+ ED W VI ++F E GLV QQL S++EFV ++Q LV E
Sbjct: 4 DESMADPYQYDSIDEPITQEDCWTVITSFFQEKGLVSQQLDSFDEFVETSIQELVWEDSH 63
Query: 347 IVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYST 526
++L Q+ +D EN + I FG++ +SKP+ TE +G ++P +ARLRNLTYS+
Sbjct: 64 LILDQPAQHTSEKD--HENKRYEITFGKIYISKPSQTEGDGSTHAVFPQEARLRNLTYSS 121
Query: 527 PL 532
PL
Sbjct: 122 PL 123
[133][TOP]
>UniRef100_B8MU25 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC
10500 RepID=B8MU25_TALSN
Length = 1256
Score = 99.4 bits (246), Expect = 1e-19
Identities = 53/119 (44%), Positives = 76/119 (63%), Gaps = 2/119 (1%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
DE YED + I++ED W VI++YFD GLV QQL S++EF+S TMQ LV+E + +
Sbjct: 10 DEYYEDEEEG-ITSEDCWTVISSYFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTI-- 66
Query: 362 EDQYVPGRDAPDENT--KVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
+ P D D + IK+G + +++P+F+E NG A L P +AR RNLTY++PL
Sbjct: 67 DQTITPNEDEIDPVVIRRYEIKYGTIMLARPSFSEINGAATLLLPMEARHRNLTYASPL 125
[134][TOP]
>UniRef100_B6QUV1 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC
18224 RepID=B6QUV1_PENMQ
Length = 1254
Score = 99.4 bits (246), Expect = 1e-19
Identities = 53/119 (44%), Positives = 76/119 (63%), Gaps = 2/119 (1%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
DE YED + I++ED W VI++YFD GLV QQL S++EF+S TMQ LV+E + +
Sbjct: 10 DEYYEDEEEG-ITSEDCWTVISSYFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTI-- 66
Query: 362 EDQYVPGRDAPDENT--KVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
+ P D D + IK+G + +++P+F+E NG A L P +AR RNLTY++PL
Sbjct: 67 DQTITPNEDEIDPVVIRRYEIKYGTIMLARPSFSEINGAATLLLPMEARHRNLTYASPL 125
[135][TOP]
>UniRef100_P08518 DNA-directed RNA polymerase II subunit RPB2 n=4 Tax=Saccharomyces
cerevisiae RepID=RPB2_YEAST
Length = 1224
Score = 99.4 bits (246), Expect = 1e-19
Identities = 56/131 (42%), Positives = 81/131 (61%)
Frame = +2
Query: 140 MSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTM 319
MSD N + Y+ +ED + A I+AED+W VI+A+F E GLV QQL S+N+FV T+
Sbjct: 1 MSDLANSEKYYDEDPYGFEDES-APITAEDSWAVISAFFREKGLVSQQLDSFNQFVDYTL 59
Query: 320 QRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQA 499
Q ++ E ++L Q+ D + + K I FG++ V+KP E++G LYP +A
Sbjct: 60 QDIICEDSTLILEQLAQHTTESD--NISRKYEISFGKIYVTKPMVNESDGVTHALYPQEA 117
Query: 500 RLRNLTYSTPL 532
RLRNLTYS+ L
Sbjct: 118 RLRNLTYSSGL 128
[136][TOP]
>UniRef100_B8NK59 DNA-directed RNA polymerase n=2 Tax=Aspergillus RepID=B8NK59_ASPFN
Length = 1254
Score = 99.0 bits (245), Expect = 2e-19
Identities = 52/124 (41%), Positives = 79/124 (63%), Gaps = 7/124 (5%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
++E+ D + I++ED W VI+++FD GLV QQL S++EF+S TMQ LV+E + L
Sbjct: 9 EDEFYDDMEEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTL-- 66
Query: 362 EDQYVPGRDAPDEN-------TKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTY 520
DQ +P PDE+ + +KFG + +S+P+ TE +G + P +ARLRNLTY
Sbjct: 67 -DQTLP----PDEDEVDPVVVRRYELKFGTVMLSRPSVTEGDGATTIMLPQEARLRNLTY 121
Query: 521 STPL 532
++PL
Sbjct: 122 ASPL 125
[137][TOP]
>UniRef100_A3GFG5 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
RepID=A3GFG5_PICST
Length = 1232
Score = 99.0 bits (245), Expect = 2e-19
Identities = 50/114 (43%), Positives = 72/114 (63%)
Frame = +2
Query: 191 YEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQ 370
Y+D + I+ ED W VI+++F E GLV QQL S++EF+ T+Q LV E ++L Q
Sbjct: 10 YDDGDAQSITPEDCWTVISSFFQEKGLVSQQLDSFDEFIETTIQELVWEDSHLILDQPAQ 69
Query: 371 YVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
+ D EN + I FG++ +SKP TE +G ++P +ARLRNLTYS+PL
Sbjct: 70 HTSEDD--HENRRYEITFGKIYISKPMQTEGDGTTHPMFPQEARLRNLTYSSPL 121
[138][TOP]
>UniRef100_A5DHT2 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Pichia
guilliermondii RepID=RPB2_PICGU
Length = 1236
Score = 99.0 bits (245), Expect = 2e-19
Identities = 53/131 (40%), Positives = 78/131 (59%)
Frame = +2
Query: 140 MSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTM 319
MSD ++ +Y D + + I+ ED W VI+++F E GLV QQL S++EF+ T+
Sbjct: 1 MSDQASDPYMY--------DDDSSSITPEDCWTVISSFFQEKGLVSQQLDSFDEFIESTI 52
Query: 320 QRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQA 499
Q LV E ++L Q+ D EN + I FG++ +SKP TE +G ++P +A
Sbjct: 53 QELVWEDSRLILDQPAQHTSEED--HENRRYEITFGKIYISKPTQTEGDGTTHPMFPQEA 110
Query: 500 RLRNLTYSTPL 532
RLRNLTYS+PL
Sbjct: 111 RLRNLTYSSPL 121
[139][TOP]
>UniRef100_Q753Q4 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Eremothecium
gossypii RepID=RPB2_ASHGO
Length = 1222
Score = 99.0 bits (245), Expect = 2e-19
Identities = 49/113 (43%), Positives = 78/113 (69%)
Frame = +2
Query: 194 EDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQY 373
+D DA I+AED+W VI+A+F E GLV QQL S+N+F++ T+Q L+ E ++L Q+
Sbjct: 14 DDDEDAPITAEDSWTVISAFFREKGLVSQQLDSFNQFINYTIQDLILEDSTLILEQLAQH 73
Query: 374 VPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
+A + + K I FG++ ++KP+ TE++G + +YP +ARLRNLTY++ L
Sbjct: 74 T--TEADNISRKYEISFGKIYLAKPSMTESDGVSHAMYPQEARLRNLTYASGL 124
[140][TOP]
>UniRef100_UPI000180B7B7 PREDICTED: similar to POLR2B protein n=1 Tax=Ciona intestinalis
RepID=UPI000180B7B7
Length = 1173
Score = 98.2 bits (243), Expect = 3e-19
Identities = 53/124 (42%), Positives = 77/124 (62%), Gaps = 12/124 (9%)
Frame = +2
Query: 197 DPNDADISAED------------AWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDES 340
D +D D+ AE+ W VI++YFDE GLVRQQL S++EF+ +++QR+V+++
Sbjct: 3 DDDDLDLQAEEEEEISPEMWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDA 62
Query: 341 PDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTY 520
P I L E Q+ + TK ++KF Q+ +SKP E +G + PN+ARLRNLTY
Sbjct: 63 PIIELQAESQHTSTEVSVP--TKYLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY 120
Query: 521 STPL 532
S PL
Sbjct: 121 SAPL 124
[141][TOP]
>UniRef100_UPI000151B416 hypothetical protein PGUG_02833 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151B416
Length = 1291
Score = 98.2 bits (243), Expect = 3e-19
Identities = 53/131 (40%), Positives = 77/131 (58%)
Frame = +2
Query: 140 MSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTM 319
MSD ++ +Y D + I+ ED W VI+++F E GLV QQL S++EF+ T+
Sbjct: 56 MSDQASDPYMY--------DDDSLSITPEDCWTVISSFFQEKGLVSQQLDSFDEFIESTI 107
Query: 320 QRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQA 499
Q LV E ++L Q+ D EN + I FG++ +SKP TE +G ++P +A
Sbjct: 108 QELVWEDSRLILDQPAQHTSEED--HENRRYEITFGKIYISKPTQTEGDGTTHPMFPQEA 165
Query: 500 RLRNLTYSTPL 532
RLRNLTYS+PL
Sbjct: 166 RLRNLTYSSPL 176
[142][TOP]
>UniRef100_A7ATA0 DNA-directed RNA polymerase n=1 Tax=Babesia bovis
RepID=A7ATA0_BABBO
Length = 1207
Score = 98.2 bits (243), Expect = 3e-19
Identities = 46/103 (44%), Positives = 69/103 (66%)
Frame = +2
Query: 224 EDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDEN 403
ED+W+VI ++F+ HGLV QQ++S+N+FV+ MQ +D+ P I + P+ QY P D + N
Sbjct: 59 EDSWKVIGSFFNTHGLVHQQIESFNDFVTYRMQETIDQHPPIEITPQPQYHP-EDERENN 117
Query: 404 TKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
+KFGQL ++KP E G ++P +ARLRNLTYS+ +
Sbjct: 118 IVYKLKFGQLSLNKPCVEEMAGVLKHIWPQEARLRNLTYSSQI 160
[143][TOP]
>UniRef100_C5FJF0 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
RepID=C5FJF0_NANOT
Length = 1258
Score = 98.2 bits (243), Expect = 3e-19
Identities = 54/122 (44%), Positives = 78/122 (63%), Gaps = 5/122 (4%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
D+ Y + + I++ED W VI+A+F+ GLV QQL S++EF+S TMQ LV+E + L
Sbjct: 9 DDVYYEAEEG-ITSEDCWTVISAFFESKGLVSQQLDSFDEFISTTMQELVEEQGQVTL-- 65
Query: 362 EDQYVPGRDAPDENTKVV-----IKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYST 526
DQ VP D DE VV +KFG + +++P+ TE +G + P +ARLRNLTY++
Sbjct: 66 -DQTVPPGD--DEQDPVVLRRYELKFGTVMLARPSMTEGDGATSIMLPQEARLRNLTYAS 122
Query: 527 PL 532
PL
Sbjct: 123 PL 124
[144][TOP]
>UniRef100_C4JKI6 DNA-directed RNA polymerase II 138 kDa polypeptide n=1
Tax=Uncinocarpus reesii 1704 RepID=C4JKI6_UNCRE
Length = 884
Score = 97.8 bits (242), Expect = 4e-19
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Frame = +2
Query: 185 EEYEDPNDAD--------ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDES 340
EEYED D I++ED W VI+++F+ GLV QQL S++EF+S TMQ LV+E
Sbjct: 2 EEYEDEYGEDGYYEAEEGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQ 61
Query: 341 PDIVLIPEDQYVPGRDAPDE--NTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNL 514
+ L + P D PD + +KFG + +++P+ TE +G + P +ARLRNL
Sbjct: 62 GQVTL--DQTIAPEEDDPDPVLVRRYELKFGTVMLARPSMTEGDGATSIMLPQEARLRNL 119
Query: 515 TYSTPL 532
TY++PL
Sbjct: 120 TYASPL 125
[145][TOP]
>UniRef100_C5LHP3 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
RepID=C5LHP3_9ALVE
Length = 993
Score = 97.4 bits (241), Expect = 5e-19
Identities = 53/131 (40%), Positives = 84/131 (64%), Gaps = 6/131 (4%)
Frame = +2
Query: 158 EDGVYNGVDEEYEDPNDAD--ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLV 331
E+ V D + +D +D + I +D+W V +AYF + GLV QQ+ S+++FV+ MQ +V
Sbjct: 88 EEKVAMEEDADLDDDDDVEDEIVQDDSWAVADAYFKDKGLVSQQVGSFDDFVTYKMQEIV 147
Query: 332 DESPDIVLIPEDQYVPGRDAPDE----NTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQA 499
DE P I +IP++Q G ++ ++ +++FGQL ++KP E +G +L PNQA
Sbjct: 148 DECPPITIIPQNQV--GWESEGARVYMDSSFLVEFGQLSLNKPTVEEVDGAMTSLTPNQA 205
Query: 500 RLRNLTYSTPL 532
RLRNLTYS+P+
Sbjct: 206 RLRNLTYSSPV 216
[146][TOP]
>UniRef100_C5PAW2 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735
delta SOWgp RepID=C5PAW2_COCP7
Length = 1258
Score = 97.4 bits (241), Expect = 5e-19
Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
Frame = +2
Query: 131 LYDMSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVS 310
+ + D EDG Y + I++ED W VI+++F+ GLV QQL S++EF+S
Sbjct: 1 MQEYEDEYGEDGYYEA---------EEGITSEDCWTVISSFFESKGLVSQQLDSFDEFIS 51
Query: 311 VTMQRLVDESPDIVLIPEDQYVPGRDAPDE--NTKVVIKFGQLRVSKPNFTENNGEAXTL 484
TMQ LV+E + L + P D PD + +KFG + +++P+ TE +G +
Sbjct: 52 TTMQELVEEQGQVTL--DQTIAPDEDDPDPVMVRRYELKFGTVMLARPSMTEGDGATSIM 109
Query: 485 YPNQARLRNLTYSTPL 532
P +ARLRNLTY++PL
Sbjct: 110 LPQEARLRNLTYASPL 125
[147][TOP]
>UniRef100_C4Y646 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4Y646_CLAL4
Length = 369
Score = 97.4 bits (241), Expect = 5e-19
Identities = 51/120 (42%), Positives = 73/120 (60%), Gaps = 6/120 (5%)
Frame = +2
Query: 191 YEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVL----- 355
Y++ + I+ ED W VI+++F E GLV QQL S++EF+ T+Q LV E ++L
Sbjct: 13 YDEDDSNSITPEDCWTVISSFFQEKGLVSQQLDSFDEFIESTIQELVWEDSHLILDQPAQ 72
Query: 356 -IPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
EDQY EN + I FG++ +SKP TE +G ++P +ARLRNLTYS+PL
Sbjct: 73 HTSEDQY--------ENKRFEITFGKIYISKPTQTEGDGTTHPMFPQEARLRNLTYSSPL 124
[148][TOP]
>UniRef100_Q872W7 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
RepID=Q872W7_NEUCR
Length = 1287
Score = 97.1 bits (240), Expect = 7e-19
Identities = 56/138 (40%), Positives = 82/138 (59%), Gaps = 5/138 (3%)
Frame = +2
Query: 134 YDMSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSV 313
YD D+ ++ D+ DPN I+ ED+WEVI++YFD GLV QQ+ S+NEF +
Sbjct: 19 YDNDDNYENLSTFDDEDDG-SDPNA--ITPEDSWEVISSYFDLKGLVSQQIDSFNEFTTD 75
Query: 314 TMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIK-----FGQLRVSKPNFTENNGEAX 478
T+Q L+DE D+ L D PG DE +++++ FG++ +S+P TE GE
Sbjct: 76 TVQSLIDEYADLTL---DHPSPG---DDEGREIILRRYDVHFGEIIISRPTLTEATGETI 129
Query: 479 TLYPNQARLRNLTYSTPL 532
+L P + R RNLTYS P+
Sbjct: 130 SLLPYECRDRNLTYSAPI 147
[149][TOP]
>UniRef100_Q6CWA5 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
RepID=Q6CWA5_KLULA
Length = 1221
Score = 96.7 bits (239), Expect = 9e-19
Identities = 49/112 (43%), Positives = 76/112 (67%)
Frame = +2
Query: 197 DPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYV 376
D +A ISAED+W VI+A+F E GLV QQL S+N+F++ T+Q L+ E ++L Q+
Sbjct: 13 DEEEAAISAEDSWTVISAFFREKGLVSQQLDSFNQFINYTIQDLILEDSTLILEQLAQHT 72
Query: 377 PGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
D + + K I FG++ ++KP+ TE++G + +YP +ARLRNLTY++ L
Sbjct: 73 TETD--NISRKYEISFGKIYLAKPSMTESDGVSHAMYPQEARLRNLTYASGL 122
[150][TOP]
>UniRef100_C5DW43 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS
732 RepID=C5DW43_ZYGRC
Length = 1224
Score = 96.7 bits (239), Expect = 9e-19
Identities = 55/125 (44%), Positives = 78/125 (62%), Gaps = 7/125 (5%)
Frame = +2
Query: 179 VDEEY--EDP-----NDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDE 337
VDE+Y EDP + I+AED+W VI+A+F E GLV QQL S+N+FV T+Q ++ E
Sbjct: 6 VDEDYYAEDPYGYEDENFPITAEDSWAVISAFFREKGLVSQQLDSFNQFVDYTLQDIISE 65
Query: 338 SPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLT 517
++L Q+ D + + K I FG++ V+KP E++G LYP +ARLRNLT
Sbjct: 66 DSTLILEQLAQHTTESD--NISRKYEISFGKIYVTKPMVNESDGVTHALYPQEARLRNLT 123
Query: 518 YSTPL 532
YS+ L
Sbjct: 124 YSSGL 128
[151][TOP]
>UniRef100_C4QZQ7 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4QZQ7_PICPG
Length = 1227
Score = 96.3 bits (238), Expect = 1e-18
Identities = 47/109 (43%), Positives = 73/109 (66%)
Frame = +2
Query: 206 DADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGR 385
D I+ ED W VI+A+F+E GLV QQL S++EF+ ++Q LV E P ++L Q+ +
Sbjct: 9 DDTITTEDCWTVISAFFEEKGLVSQQLDSFDEFMETSIQDLVWEEPRLILDQPAQHTNEK 68
Query: 386 DAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
D + N + I+FG++ +S+P TE +G ++P +ARLRNLTYS+P+
Sbjct: 69 D--NINKRYEIRFGKIYLSRPTMTEADGTTHAMFPQEARLRNLTYSSPV 115
[152][TOP]
>UniRef100_B2W4R0 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2W4R0_PYRTR
Length = 1208
Score = 96.3 bits (238), Expect = 1e-18
Identities = 50/114 (43%), Positives = 71/114 (62%), Gaps = 1/114 (0%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
+EYED D + ED W VI+++FD GLV QQL SY+EF T+Q +V E+ ++L
Sbjct: 13 DEYEDEEDR-VLPEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGSVILEQN 71
Query: 365 DQYVPG-RDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYS 523
Y P D P + +KFG++ +++P TE +G LYP++ARLRNLTYS
Sbjct: 72 QPYNPDEEDNPIIKRRYEMKFGRVYLARPTHTEGDGTTVQLYPHEARLRNLTYS 125
[153][TOP]
>UniRef100_Q02061 DNA-directed RNA polymerase II subunit RPB2 n=1
Tax=Schizosaccharomyces pombe RepID=RPB2_SCHPO
Length = 1210
Score = 96.3 bits (238), Expect = 1e-18
Identities = 52/116 (44%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
Frame = +2
Query: 191 YEDPN-DADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPED 367
YED + ++ ED W VI+++F+E L RQQL S++EFV TMQ +VD+ + L D
Sbjct: 3 YEDYQYNETLTQEDCWTVISSFFEETSLARQQLFSFDEFVQNTMQEIVDDDSTLTL---D 59
Query: 368 QYVPGRDAPDENTK-VVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
QY A + T+ I FGQ+ +S+P TE +G T++P +ARLRNLTYS+PL
Sbjct: 60 QYAQHTGAQGDVTRRYEINFGQIYLSRPTMTEADGSTTTMFPQEARLRNLTYSSPL 115
[154][TOP]
>UniRef100_Q6FLD5 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Candida
glabrata RepID=RPB2_CANGA
Length = 1223
Score = 96.3 bits (238), Expect = 1e-18
Identities = 53/128 (41%), Positives = 79/128 (61%)
Frame = +2
Query: 149 SGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRL 328
S + + Y+ +E+ N A I+AED W VI+A+F E GLV QQL S+N+FV T+Q +
Sbjct: 2 SADNEDYYDEDPYGFEEEN-APITAEDTWAVISAFFREKGLVSQQLDSFNQFVDYTLQDI 60
Query: 329 VDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLR 508
+ E ++L Q+ +D + + K I FG++ V+KP E++G LYP +ARLR
Sbjct: 61 ISEDSTLILEQLAQHTTEQD--NISRKYEISFGKIYVTKPMVNESDGVTHALYPQEARLR 118
Query: 509 NLTYSTPL 532
NLTYS+ L
Sbjct: 119 NLTYSSGL 126
[155][TOP]
>UniRef100_C5DLS0 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS
6340 RepID=C5DLS0_LACTC
Length = 1220
Score = 95.9 bits (237), Expect = 2e-18
Identities = 49/114 (42%), Positives = 79/114 (69%)
Frame = +2
Query: 191 YEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQ 370
YED ++A I+AED+W VI+A+F E GLV QQL S+N+F++ T+Q + E ++L Q
Sbjct: 14 YED-DEASITAEDSWTVISAFFREKGLVSQQLDSFNQFINYTIQDSIVEDSTLILEQLAQ 72
Query: 371 YVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
+ +A + + K I FG++ ++KP+ TE++G + +YP +ARLRNLTY++ L
Sbjct: 73 HT--TEADNISRKYEISFGKIYLAKPSMTESDGVSHAMYPQEARLRNLTYASGL 124
[156][TOP]
>UniRef100_B5RV50 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
RepID=B5RV50_DEBHA
Length = 1232
Score = 95.9 bits (237), Expect = 2e-18
Identities = 49/114 (42%), Positives = 74/114 (64%)
Frame = +2
Query: 191 YEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQ 370
Y+D +++ I+ E+ W VI+++F E GLV QQL S++EF+ T+Q LV E ++L Q
Sbjct: 13 YDDDSES-ITPENCWTVISSFFQEKGLVSQQLDSFDEFIETTIQELVWEDSHLILDQPAQ 71
Query: 371 YVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
+ D EN + I FG++ +SKP TE +G ++P +ARLRNLTYS+PL
Sbjct: 72 HTSEDD--HENRRYEITFGKIYISKPTQTEGDGTTHPMFPQEARLRNLTYSSPL 123
[157][TOP]
>UniRef100_Q1L5A7 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Spinacia oleracea RepID=Q1L5A7_SPIOL
Length = 495
Score = 95.1 bits (235), Expect = 3e-18
Identities = 47/85 (55%), Positives = 59/85 (69%)
Frame = +2
Query: 278 QQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFT 457
QQL S++EF+ TMQ +VDES DI + PE Q+ PG + T IKFGQ+ +SKP T
Sbjct: 1 QQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYKIKFGQIYLSKPMMT 60
Query: 458 ENNGEAXTLYPNQARLRNLTYSTPL 532
E++GE TL+P ARLRNLTYS PL
Sbjct: 61 ESDGETATLFPKAARLRNLTYSAPL 85
[158][TOP]
>UniRef100_C9SGY6 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Verticillium
albo-atrum VaMs.102 RepID=C9SGY6_9PEZI
Length = 1260
Score = 95.1 bits (235), Expect = 3e-18
Identities = 54/133 (40%), Positives = 81/133 (60%), Gaps = 2/133 (1%)
Frame = +2
Query: 140 MSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTM 319
M+ +E+ Y+G +E+ DA I+ ED W VI+++FD GLV QQ+ S++EF + T+
Sbjct: 1 MATEYDEEFDYDGYEED-----DASITPEDCWTVISSFFDSKGLVSQQVDSFDEFTTSTV 55
Query: 320 QRLVDESPDIVLIPEDQYVPGRDAPDENT--KVVIKFGQLRVSKPNFTENNGEAXTLYPN 493
Q L+DE I L DQ P D+ + +KFG + VS+P+ TE +G+ TL P
Sbjct: 56 QELIDEYSHITL---DQPNPASDSDRAIALRRYEVKFGTVMVSRPSITEADGKVSTLLPY 112
Query: 494 QARLRNLTYSTPL 532
+ R RNLTY++PL
Sbjct: 113 ECRDRNLTYASPL 125
[159][TOP]
>UniRef100_A4QV56 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
RepID=A4QV56_MAGGR
Length = 1276
Score = 95.1 bits (235), Expect = 3e-18
Identities = 52/131 (39%), Positives = 74/131 (56%)
Frame = +2
Query: 140 MSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTM 319
M++ G D + +Y+ ND +I+AED W VI++YFDE GLV QQ+ SYNEF + T+
Sbjct: 1 MAEYGEMDEYADYEAGDYDAENDDEITAEDCWNVISSYFDEKGLVSQQIDSYNEFTTSTI 60
Query: 320 QRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQA 499
Q +VDE + L + P + I G + V++P E +G+ TL P +
Sbjct: 61 QGIVDEYSVLTLDNPNPPDTFEGKPIRLRRYEIMLGNILVTQPTVKETDGKVSTLVPYEC 120
Query: 500 RLRNLTYSTPL 532
R RNLTYS PL
Sbjct: 121 RDRNLTYSCPL 131
[160][TOP]
>UniRef100_C5MEG3 DNA-directed RNA polymerase n=1 Tax=Candida tropicalis MYA-3404
RepID=C5MEG3_CANTT
Length = 1240
Score = 94.4 bits (233), Expect = 5e-18
Identities = 51/119 (42%), Positives = 75/119 (63%)
Frame = +2
Query: 176 GVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVL 355
G DEE E I+ ED W VI+++F E GLV QQL S++EFV ++Q LV E ++L
Sbjct: 12 GYDEEIET-----ITQEDCWTVISSFFQEKGLVSQQLDSFDEFVETSIQELVWEDSHLIL 66
Query: 356 IPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
Q+ D +N + I+FG++ +SK + TE +G +++P +ARLRNLTYS+PL
Sbjct: 67 DQPAQHTSVAD--HKNKRYEIEFGKIYISKTSQTEGDGTTHSVFPQEARLRNLTYSSPL 123
[161][TOP]
>UniRef100_C5JQR0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis
SLH14081 RepID=C5JQR0_AJEDS
Length = 1258
Score = 94.4 bits (233), Expect = 5e-18
Identities = 49/123 (39%), Positives = 75/123 (60%), Gaps = 6/123 (4%)
Frame = +2
Query: 182 DEEYEDP----NDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDI 349
+EEY + D I++ED W VI+++F+ GLV QQL S++EF+S TMQ LV+E +
Sbjct: 5 EEEYGEDAYYDQDEGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQGQV 64
Query: 350 VLIPEDQYVPGRDAPDENT--KVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYS 523
L + P D D + +KFG + +++P+ TE +G + P +ARLRNLTY+
Sbjct: 65 TL--DQTLAPSEDEIDPVVLRRYELKFGTVMLARPSMTEGDGATSIMLPQEARLRNLTYA 122
Query: 524 TPL 532
+PL
Sbjct: 123 SPL 125
[162][TOP]
>UniRef100_C5GBN2 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis ER-3
RepID=C5GBN2_AJEDR
Length = 1258
Score = 94.4 bits (233), Expect = 5e-18
Identities = 49/121 (40%), Positives = 74/121 (61%), Gaps = 2/121 (1%)
Frame = +2
Query: 176 GVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVL 355
G D Y+ D I++ED W VI+++F+ GLV QQL S++EF+S TMQ LV+E + L
Sbjct: 9 GQDAYYDQ--DEGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQGQVTL 66
Query: 356 IPEDQYVPGRDAPDENT--KVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTP 529
+ P D D + +KFG + +++P+ TE +G + P +ARLRNLTY++P
Sbjct: 67 --DQTLAPSEDEIDPVVLRRYELKFGTVMLARPSMTEGDGATSIMLPQEARLRNLTYASP 124
Query: 530 L 532
L
Sbjct: 125 L 125
[163][TOP]
>UniRef100_A6R483 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
RepID=A6R483_AJECN
Length = 1743
Score = 94.4 bits (233), Expect = 5e-18
Identities = 49/123 (39%), Positives = 75/123 (60%), Gaps = 6/123 (4%)
Frame = +2
Query: 182 DEEYEDP----NDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDI 349
+EEY + D I++ED W VI+++F+ GLV QQL S++EF+S TMQ LV+E +
Sbjct: 490 EEEYGEDAYYDQDEGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQGQV 549
Query: 350 VLIPEDQYVPGRDAPDENT--KVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYS 523
L + P D D + +KFG + +++P+ TE +G + P +ARLRNLTY+
Sbjct: 550 TL--DQTLAPAEDKIDPVVLRRYELKFGTVMLARPSMTEGDGATSIMLPQEARLRNLTYA 607
Query: 524 TPL 532
+PL
Sbjct: 608 SPL 610
[164][TOP]
>UniRef100_Q98RY5 DNA-directed RNA polymerase n=1 Tax=Guillardia theta
RepID=Q98RY5_GUITH
Length = 1206
Score = 94.0 bits (232), Expect = 6e-18
Identities = 44/110 (40%), Positives = 70/110 (63%)
Frame = +2
Query: 203 NDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPG 382
N+++ + W ++ +F + GLV QQ+ S+N F+ TMQ ++D+ P I + ++ PG
Sbjct: 2 NNSNFDIDILWHILKLFFIQKGLVDQQINSFNNFIQNTMQDIIDDMPPITVYIDND--PG 59
Query: 383 RDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
D ++VI+ GQL +SKP + E++G L PN+ARLRNLTYS+PL
Sbjct: 60 NDDLLSKIRMVIRLGQLHLSKPTYIEDDGLVHNLVPNEARLRNLTYSSPL 109
[165][TOP]
>UniRef100_C0NB61 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
RepID=C0NB61_AJECG
Length = 1307
Score = 94.0 bits (232), Expect = 6e-18
Identities = 49/123 (39%), Positives = 75/123 (60%), Gaps = 6/123 (4%)
Frame = +2
Query: 182 DEEYEDP----NDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDI 349
+EEY + D I++ED W VI+++F+ GLV QQL S++EF+S TMQ LV+E +
Sbjct: 107 EEEYGEDAYYDQDEGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQGQV 166
Query: 350 VLIPEDQYVPGRDAPDENT--KVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYS 523
L + P D D + +KFG + +++P+ TE +G + P +ARLRNLTY+
Sbjct: 167 TL--DQTLAPAEDEIDPVVLRRYELKFGTVMLARPSVTEGDGATSIMLPQEARLRNLTYA 224
Query: 524 TPL 532
+PL
Sbjct: 225 SPL 227
[166][TOP]
>UniRef100_C4Q1D7 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni
RepID=C4Q1D7_SCHMA
Length = 1304
Score = 93.6 bits (231), Expect = 8e-18
Identities = 52/134 (38%), Positives = 76/134 (56%)
Frame = +2
Query: 131 LYDMSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVS 310
L D + E Y +D D+ E W VI++YFDE GLVRQQL S++EF+
Sbjct: 119 LEDFEEDDPERQFYGDEQSNEDDEITPDMWQEACWIVISSYFDEKGLVRQQLDSFDEFIQ 178
Query: 311 VTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYP 490
++Q++V++SP I L E Q+ G + + +KF Q+ +SK E +G + + P
Sbjct: 179 TSIQKIVEDSPIIELQAEAQHSGG--ILETPVQYRLKFEQIYLSKATHWEKDGSSVPMTP 236
Query: 491 NQARLRNLTYSTPL 532
N ARLRNLTY+ PL
Sbjct: 237 NDARLRNLTYAAPL 250
[167][TOP]
>UniRef100_B6KB61 DNA-directed RNA polymerase n=3 Tax=Toxoplasma gondii
RepID=B6KB61_TOXGO
Length = 1259
Score = 93.2 bits (230), Expect = 1e-17
Identities = 44/116 (37%), Positives = 70/116 (60%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E ++ + + W V++++F HGLV QQL+S+N+FVS +Q ++DE P I + P
Sbjct: 76 EHGDEGEQGSVDQDACWAVVSSFFHSHGLVNQQLESFNDFVSYKIQEIIDEHPPIEIRPT 135
Query: 365 DQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
QY P + + N +K QL +++P+ E G + L+P +AR RNLTYS+PL
Sbjct: 136 PQYRPEEEV-ESNVIYRLKMDQLSLNRPSVEEKEGISKHLWPYEARTRNLTYSSPL 190
[168][TOP]
>UniRef100_C1H7W3 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb01 RepID=C1H7W3_PARBA
Length = 1258
Score = 93.2 bits (230), Expect = 1e-17
Identities = 49/126 (38%), Positives = 75/126 (59%), Gaps = 10/126 (7%)
Frame = +2
Query: 185 EEYEDPNDAD--------ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDES 340
E+YE+ D I++ED W VI+++F+ GLV QQL S++EF+S TMQ LV+E
Sbjct: 2 EDYEEEYGEDVYCEQEEGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQ 61
Query: 341 PDIVLIPEDQYVPGRDAPDENT--KVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNL 514
+ L + P D D + +KFG + +++P+ TE +G + P +ARLRNL
Sbjct: 62 GQVTL--DQTLAPSEDEVDPVVLRRYELKFGTVMLARPSMTEGDGATSIMLPQEARLRNL 119
Query: 515 TYSTPL 532
TY++PL
Sbjct: 120 TYASPL 125
[169][TOP]
>UniRef100_C0S0L5 DNA-directed RNA polymerase n=2 Tax=Paracoccidioides brasiliensis
RepID=C0S0L5_PARBP
Length = 1258
Score = 93.2 bits (230), Expect = 1e-17
Identities = 49/126 (38%), Positives = 75/126 (59%), Gaps = 10/126 (7%)
Frame = +2
Query: 185 EEYEDPNDAD--------ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDES 340
E+YE+ D I++ED W VI+++F+ GLV QQL S++EF+S TMQ LV+E
Sbjct: 2 EDYEEEYGEDVYCEQEEGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQ 61
Query: 341 PDIVLIPEDQYVPGRDAPDENT--KVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNL 514
+ L + P D D + +KFG + +++P+ TE +G + P +ARLRNL
Sbjct: 62 GQVTL--DQTLAPSEDEVDPVVLRRYELKFGTVMLARPSMTEGDGATSIMLPQEARLRNL 119
Query: 515 TYSTPL 532
TY++PL
Sbjct: 120 TYASPL 125
[170][TOP]
>UniRef100_A7TTM7 DNA-directed RNA polymerase n=1 Tax=Vanderwaltozyma polyspora DSM
70294 RepID=A7TTM7_VANPO
Length = 1223
Score = 92.8 bits (229), Expect = 1e-17
Identities = 50/122 (40%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Frame = +2
Query: 170 YNGVDEEYE-DPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPD 346
Y G ++ Y + A I+AED+W VI+++F E GLV QQL S+N+FV T+Q ++ E
Sbjct: 6 YYGDEDPYGFEEETAPITAEDSWAVISSFFREKGLVSQQLDSFNQFVDYTLQDIISEDST 65
Query: 347 IVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYST 526
++L Q+ D + + K I FG++ V+KP E++G LYP ++RLRNLTYS+
Sbjct: 66 LILEQLAQHTTESD--NISRKYEISFGKIYVTKPMVNESDGVTHALYPQESRLRNLTYSS 123
Query: 527 PL 532
L
Sbjct: 124 GL 125
[171][TOP]
>UniRef100_Q8SR75 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Encephalitozoon
cuniculi RepID=RPB2_ENCCU
Length = 1141
Score = 92.0 bits (227), Expect = 2e-17
Identities = 43/110 (39%), Positives = 77/110 (70%), Gaps = 1/110 (0%)
Frame = +2
Query: 206 DADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGR 385
++ + E +W +I+++F++ GLVRQQL S+++FV MQ +++ESP I++ Q P
Sbjct: 2 ESAFTKEHSWSIISSFFEQKGLVRQQLDSFDQFVKTKMQEVINESPVIIV----QSAPTA 57
Query: 386 DAPDENTKVVIKFGQLRVSKPN-FTENNGEAXTLYPNQARLRNLTYSTPL 532
+ ++ ++FGQ+ VSKP +TE++G T++PN+AR+R+LTY++PL
Sbjct: 58 GI-ETQKRIAVRFGQIYVSKPPVYTESDGRTITVFPNEARIRDLTYASPL 106
[172][TOP]
>UniRef100_UPI00017B4CC9 UPI00017B4CC9 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B4CC9
Length = 1147
Score = 91.7 bits (226), Expect = 3e-17
Identities = 45/96 (46%), Positives = 67/96 (69%)
Frame = +2
Query: 245 NAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKF 424
++YFDE GLVRQQL S++EF+ +++QR+V+++P I L E Q+ G +E + ++KF
Sbjct: 4 SSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDLQAEAQHTSGE--VEEPPRYLLKF 61
Query: 425 GQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 62 EQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 97
[173][TOP]
>UniRef100_Q4T1Y4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon
nigroviridis RepID=Q4T1Y4_TETNG
Length = 1217
Score = 91.7 bits (226), Expect = 3e-17
Identities = 45/96 (46%), Positives = 67/96 (69%)
Frame = +2
Query: 245 NAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKF 424
++YFDE GLVRQQL S++EF+ +++QR+V+++P I L E Q+ G +E + ++KF
Sbjct: 4 SSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDLQAEAQHTSGE--VEEPPRYLLKF 61
Query: 425 GQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
Q+ +SKP E +G + PN+ARLRNLTYS PL
Sbjct: 62 EQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPL 97
[174][TOP]
>UniRef100_A9UUX4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis
RepID=A9UUX4_MONBE
Length = 1166
Score = 87.4 bits (215), Expect = 6e-16
Identities = 47/111 (42%), Positives = 65/111 (58%)
Frame = +2
Query: 194 EDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQY 373
+D D D E WEVINAYF E GLVRQQL S++ F++ T+Q+++ SP I + QY
Sbjct: 1 DDDADIDNWDEACWEVINAYFREKGLVRQQLDSFDHFITYTVQKIIKNSPPIEVQGRLQY 60
Query: 374 VPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYST 526
+ + +E K I FGQ + P E +G ++PN RLRNLTY +
Sbjct: 61 L--SNEIEEPPKHTISFGQAGFALPQHKEEDGNYDHVFPNDCRLRNLTYQS 109
[175][TOP]
>UniRef100_O59226 DNA-directed RNA polymerase n=1 Tax=Pyrococcus horikoshii
RepID=O59226_PYRHO
Length = 1117
Score = 86.3 bits (212), Expect = 1e-15
Identities = 46/111 (41%), Positives = 64/111 (57%)
Frame = +2
Query: 200 PNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVP 379
P +++ +D W V+ +Y++E GLVRQ L SYN F+ +Q +VDE I
Sbjct: 4 PTVVEVTPDDLWIVMESYWEEKGLVRQHLDSYNAFIERGLQEVVDEFGGIK--------- 54
Query: 380 GRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
D PD +KFG++RV +P F E +G+ LYP AR+RNLTYS PL
Sbjct: 55 -PDIPDFE----VKFGKIRVGEPEFQEPHGQRKPLYPMDARIRNLTYSAPL 100
[176][TOP]
>UniRef100_B6YT15 DNA-directed RNA polymerase n=1 Tax=Thermococcus onnurineus NA1
RepID=B6YT15_THEON
Length = 1120
Score = 86.3 bits (212), Expect = 1e-15
Identities = 46/111 (41%), Positives = 63/111 (56%)
Frame = +2
Query: 200 PNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVP 379
P D++ +D W V+ AY+ E GLVRQ L SYN F+ MQ++++E I
Sbjct: 4 PTVVDVTPDDLWLVMEAYWKEKGLVRQHLDSYNAFIDYGMQQVINEFGGI---------- 53
Query: 380 GRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
D PD +KFG++R+ +P F E G+ LYP AR+RNLTYS PL
Sbjct: 54 KPDIPD----FEVKFGKIRLGEPEFQEAQGQRKPLYPMDARIRNLTYSAPL 100
[177][TOP]
>UniRef100_Q9V115 DNA-directed RNA polymerase n=1 Tax=Pyrococcus abyssi
RepID=Q9V115_PYRAB
Length = 1117
Score = 85.5 bits (210), Expect = 2e-15
Identities = 46/111 (41%), Positives = 63/111 (56%)
Frame = +2
Query: 200 PNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVP 379
P +++ +D W V+ +Y+ E GLVRQ L SYN F+ +Q +VDE I
Sbjct: 4 PTVVEVTPDDLWIVMESYWQEKGLVRQHLDSYNAFIDRGLQEVVDEFGGIK--------- 54
Query: 380 GRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
D PD +KFG++RV +P F E +G+ LYP AR+RNLTYS PL
Sbjct: 55 -PDIPDFE----VKFGKIRVGEPEFQEPHGQRKPLYPMDARIRNLTYSAPL 100
[178][TOP]
>UniRef100_P31814 DNA-directed RNA polymerase subunit B n=1 Tax=Thermococcus celer
RepID=RPOB_THECE
Length = 1122
Score = 85.5 bits (210), Expect = 2e-15
Identities = 45/111 (40%), Positives = 62/111 (55%)
Frame = +2
Query: 200 PNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVP 379
P D++ +D W V+ AY+ E GLVRQ L SYN F+ MQ ++DE +
Sbjct: 6 PTVVDVTPDDLWLVMEAYWKEKGLVRQHLDSYNAFIDHGMQEVIDEFGGV---------- 55
Query: 380 GRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
D PD +KFG++R+ +P F E G+ LYP AR+RNLTYS P+
Sbjct: 56 KPDIPD----FEVKFGKVRLGEPEFQEAQGQRKPLYPMDARIRNLTYSAPI 102
[179][TOP]
>UniRef100_C6A1F9 DNA-directed RNA polymerase n=1 Tax=Thermococcus sibiricus MM 739
RepID=C6A1F9_THESM
Length = 1118
Score = 85.1 bits (209), Expect = 3e-15
Identities = 43/111 (38%), Positives = 63/111 (56%)
Frame = +2
Query: 200 PNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVP 379
P +++ +D W ++ AY+DE GLVRQ L SYN F+ MQ ++ E +
Sbjct: 4 PTIVEVTPDDLWHIMKAYWDEKGLVRQHLDSYNAFIEHGMQEVISEFEGV---------- 53
Query: 380 GRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
D PD +KFG++R+ +P F E +G+ LYP AR+RNLTYS P+
Sbjct: 54 KPDIPD----FEVKFGRVRLGEPEFQEAHGQRKPLYPIDARIRNLTYSAPV 100
[180][TOP]
>UniRef100_C4V8X8 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01
RepID=C4V8X8_NOSCE
Length = 1143
Score = 84.0 bits (206), Expect = 6e-15
Identities = 43/104 (41%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
Frame = +2
Query: 224 EDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDEN 403
E +W++I+ +F++ GLV QQ+ S+++FV MQ ++DESP I + + G +
Sbjct: 8 EYSWDIISKFFEQKGLVGQQIDSFDQFVKTKMQEVIDESPLITV--QSTLSAGNET---R 62
Query: 404 TKVVIKFGQLRVSK-PNFTENNGEAXTLYPNQARLRNLTYSTPL 532
K+ +KFGQ+ VSK P++TE +G TL PN+ARLR++TY + L
Sbjct: 63 KKITLKFGQIYVSKPPSYTEADGTTITLTPNEARLRDITYLSQL 106
[181][TOP]
>UniRef100_Q8U0M3 DNA-directed RNA polymerase n=1 Tax=Pyrococcus furiosus
RepID=Q8U0M3_PYRFU
Length = 1117
Score = 84.0 bits (206), Expect = 6e-15
Identities = 45/111 (40%), Positives = 63/111 (56%)
Frame = +2
Query: 200 PNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVP 379
P D++ +D W V+ +Y+ E GLVRQ L SYN F+ +Q +V+E I
Sbjct: 4 PTVVDVTPDDLWIVMESYWQEKGLVRQHLDSYNAFIERGLQEVVNEFGGIK--------- 54
Query: 380 GRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
D PD +KFG++RV +P F E +G+ LYP AR+RNLTY+ PL
Sbjct: 55 -PDIPDFE----VKFGKIRVGEPEFQEPHGQRKPLYPMDARIRNLTYAAPL 100
[182][TOP]
>UniRef100_Q67XZ1 DNA-directed RNA polymerase II second largest chain n=1
Tax=Arabidopsis thaliana RepID=Q67XZ1_ARATH
Length = 124
Score = 83.2 bits (204), Expect = 1e-14
Identities = 39/74 (52%), Positives = 52/74 (70%)
Frame = +2
Query: 170 YNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDI 349
Y + ED +D +I+ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ +VDES DI
Sbjct: 6 YEPEPQYVEDDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 65
Query: 350 VLIPEDQYVPGRDA 391
+ PE Q+ PG +
Sbjct: 66 EIRPESQHNPGHQS 79
[183][TOP]
>UniRef100_B6TQP3 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B6TQP3_MAIZE
Length = 126
Score = 83.2 bits (204), Expect = 1e-14
Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 6/89 (6%)
Frame = +2
Query: 143 SDSGNEDGVYNGVDEEYEDPNDAD------ISAEDAWEVINAYFDEHGLVRQQLQSYNEF 304
++ +E G G EE ++ D D I+ +DAW VI+AYF+E GLVRQQL S++EF
Sbjct: 29 AEEDDEVGYGGGGGEEMDEDADGDAEQQEDITQDDAWAVISAYFEEKGLVRQQLDSFDEF 88
Query: 305 VSVTMQRLVDESPDIVLIPEDQYVPGRDA 391
+ TMQ +VDES DI + PE Q+ PGR A
Sbjct: 89 IQNTMQEIVDESADIEIRPESQHNPGRQA 117
[184][TOP]
>UniRef100_A1RWW6 DNA-directed RNA polymerase n=1 Tax=Thermofilum pendens Hrk 5
RepID=A1RWW6_THEPD
Length = 1130
Score = 81.6 bits (200), Expect = 3e-14
Identities = 46/108 (42%), Positives = 60/108 (55%)
Frame = +2
Query: 209 ADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRD 388
A +S ED W V+ AY DE GLVRQ L S+N F+ +Q +VDE I +
Sbjct: 8 AKLSREDRWRVVKAYVDELGLVRQHLDSFNAFLERGLQEIVDEVGGIKV----------- 56
Query: 389 APDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
E+ V IKFG++ V +P F E +G L P ARLRN+TY+ PL
Sbjct: 57 ---ESQGVEIKFGKIEVGQPTFREADGSDLALTPMIARLRNITYAAPL 101
[185][TOP]
>UniRef100_C4PBI7 DNA-directed RNA polymerase n=1 Tax=Epichloe festucae
RepID=C4PBI7_9HYPO
Length = 1261
Score = 80.5 bits (197), Expect = 7e-14
Identities = 48/120 (40%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 DEEYED--PNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVL 355
D +YE+ +D I+ ED W VI+++F+ GLV QQ S++EF T+Q LV+E I L
Sbjct: 7 DYDYENYGEDDEGITPEDCWTVISSFFETKGLVSQQTDSFDEFTQTTIQDLVNEYSTITL 66
Query: 356 -IPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
P PG + IKFG + VS+P +E +G +L P + R RNLTY++PL
Sbjct: 67 DQPNPPSPPG--IKIALRRYEIKFGTVMVSRPTISETDGTVTSLLPYECRDRNLTYASPL 124
[186][TOP]
>UniRef100_B5IVZ8 DNA-directed RNA polymerase n=1 Tax=Thermococcus barophilus MP
RepID=B5IVZ8_9EURY
Length = 1118
Score = 80.5 bits (197), Expect = 7e-14
Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Frame = +2
Query: 200 PNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDE----SPDIVLIPED 367
P +++ +D W V+ +Y++E GLVRQ L SYN F+ MQ +++E PDI
Sbjct: 4 PTVVEVTPDDLWSVMESYWNEKGLVRQHLDSYNAFIDHGMQEVINEFGGIKPDI------ 57
Query: 368 QYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
+KFG++R+ +P F E G+ LYP AR+RNLTY+ P+
Sbjct: 58 ------------PNFEVKFGKIRLGEPEFQEAQGQRKPLYPMDARIRNLTYAAPI 100
[187][TOP]
>UniRef100_C7ZA30 Putative uncharacterized protein n=1 Tax=Nectria haematococca mpVI
77-13-4 RepID=C7ZA30_NECH7
Length = 1261
Score = 79.7 bits (195), Expect = 1e-13
Identities = 50/132 (37%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Frame = +2
Query: 140 MSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTM 319
M+D E Y+ D++ E I+ ED W VI+++F+ GLV QQ S++EF T+
Sbjct: 1 MADYEEELSDYDNYDDQEEG-----ITPEDCWTVISSFFESKGLVSQQTDSFDEFTQTTI 55
Query: 320 QRLVDESPDIVL-IPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQ 496
Q LV+E I L P PG + IKFG + VS+P +E +G +L P +
Sbjct: 56 QDLVNEYSVISLDQPNPPSPPG--VSIALRRYEIKFGSVMVSRPTISETDGTVTSLLPYE 113
Query: 497 ARLRNLTYSTPL 532
R RNLTY++PL
Sbjct: 114 CRDRNLTYASPL 125
[188][TOP]
>UniRef100_C3N7P9 DNA-directed RNA polymerase n=2 Tax=Sulfolobus islandicus
RepID=C3N7P9_SULIY
Length = 1131
Score = 79.3 bits (194), Expect = 2e-13
Identities = 40/108 (37%), Positives = 62/108 (57%)
Frame = +2
Query: 209 ADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRD 388
+++S ++ W+VI AYF GLVRQ L SYN+FV +Q ++DE +I
Sbjct: 6 SNLSIDEKWKVIEAYFKSKGLVRQHLDSYNDFVRNKLQEIIDEQGEI------------- 52
Query: 389 APDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
P E + ++ G++R+ KP E++ + P +ARLRNLTY+ PL
Sbjct: 53 -PTEIPGLKVRLGKIRIGKPRVRESDRGEREISPMEARLRNLTYAAPL 99
[189][TOP]
>UniRef100_C3MY98 DNA-directed RNA polymerase n=3 Tax=Sulfolobus islandicus
RepID=C3MY98_SULIM
Length = 1131
Score = 79.3 bits (194), Expect = 2e-13
Identities = 40/108 (37%), Positives = 62/108 (57%)
Frame = +2
Query: 209 ADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRD 388
+++S ++ W+VI AYF GLVRQ L SYN+FV +Q ++DE +I
Sbjct: 6 SNLSIDEKWKVIEAYFKSKGLVRQHLDSYNDFVRNKLQEIIDEQGEI------------- 52
Query: 389 APDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
P E + ++ G++R+ KP E++ + P +ARLRNLTY+ PL
Sbjct: 53 -PTEIPGLKVRLGKIRIGKPRVRESDRGEREISPMEARLRNLTYAAPL 99
[190][TOP]
>UniRef100_C3MRK2 DNA-directed RNA polymerase n=1 Tax=Sulfolobus islandicus L.S.2.15
RepID=C3MRK2_SULIL
Length = 1131
Score = 79.3 bits (194), Expect = 2e-13
Identities = 40/108 (37%), Positives = 62/108 (57%)
Frame = +2
Query: 209 ADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRD 388
+++S ++ W+VI AYF GLVRQ L SYN+FV +Q ++DE +I
Sbjct: 6 SNLSIDEKWKVIEAYFKSKGLVRQHLDSYNDFVRNKLQEIIDEQGEI------------- 52
Query: 389 APDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
P E + ++ G++R+ KP E++ + P +ARLRNLTY+ PL
Sbjct: 53 -PTEIPGLKVRLGKIRIGKPRVRESDRGEREISPMEARLRNLTYAAPL 99
[191][TOP]
>UniRef100_B8YB55 DNA-directed RNA polymerase n=1 Tax=Sulfolobus shibatae B12
RepID=B8YB55_SULSH
Length = 1131
Score = 79.3 bits (194), Expect = 2e-13
Identities = 40/108 (37%), Positives = 62/108 (57%)
Frame = +2
Query: 209 ADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRD 388
+++S ++ W+VI AYF GLVRQ L SYN+FV +Q ++DE +I
Sbjct: 6 SNLSIDERWKVIEAYFKSKGLVRQHLDSYNDFVRNKLQEIIDEQGEI------------- 52
Query: 389 APDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
P E + ++ G++R+ KP E++ + P +ARLRNLTY+ PL
Sbjct: 53 -PTEIPGLKVRLGKIRIGKPRVRESDRGEREISPMEARLRNLTYAAPL 99
[192][TOP]
>UniRef100_C5A209 DNA-directed RNA polymerase n=1 Tax=Thermococcus gammatolerans EJ3
RepID=C5A209_THEGJ
Length = 1122
Score = 78.2 bits (191), Expect = 3e-13
Identities = 42/111 (37%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Frame = +2
Query: 212 DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDE----SPDIVLIPEDQYVP 379
D++ +D W V+ +Y+ E GLVRQ L SYN F+ +Q +++E PDI
Sbjct: 10 DVTPDDLWIVMESYWKEKGLVRQHLDSYNAFIEHGLQEVINEFGGVKPDI---------- 59
Query: 380 GRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
+KFG++R+ +P F E G+ LYP AR+RNLTYS PL
Sbjct: 60 --------PNFEVKFGKIRLGEPIFQEAQGQRRPLYPMDARIRNLTYSAPL 102
[193][TOP]
>UniRef100_B7R288 DNA-directed RNA polymerase n=1 Tax=Thermococcus sp. AM4
RepID=B7R288_9EURY
Length = 1122
Score = 78.2 bits (191), Expect = 3e-13
Identities = 42/111 (37%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Frame = +2
Query: 212 DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDE----SPDIVLIPEDQYVP 379
D++ +D W V+ +Y+ E GLVRQ L SYN F+ +Q +++E PDI
Sbjct: 10 DVTPDDLWIVMESYWKEKGLVRQHLDSYNAFIEHGLQEVINEFGGVKPDI---------- 59
Query: 380 GRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
+KFG++R+ +P F E G+ LYP AR+RNLTYS PL
Sbjct: 60 --------PNFEVKFGKIRLGEPIFQEAQGQRRPLYPMDARIRNLTYSAPL 102
[194][TOP]
>UniRef100_Q980R0 DNA-directed RNA polymerase, subunit B'' (RpoB2) n=1 Tax=Sulfolobus
solfataricus RepID=Q980R0_SULSO
Length = 480
Score = 77.8 bits (190), Expect = 4e-13
Identities = 39/108 (36%), Positives = 61/108 (56%)
Frame = +2
Query: 209 ADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRD 388
++++ ++ W VI AYF GLVRQ L SYN+FV +Q ++DE +I
Sbjct: 3 SNLTIDERWRVIEAYFKSKGLVRQHLDSYNDFVRNKLQEIIDEQGEI------------- 49
Query: 389 APDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
P E + ++ G++R+ KP E++ + P +ARLRNLTY+ PL
Sbjct: 50 -PTEIPGLKVRLGKIRIGKPRVRESDRGEREISPMEARLRNLTYAAPL 96
[195][TOP]
>UniRef100_C5SSJ4 DNA-directed RNA polymerase n=1 Tax=Sulfolobus solfataricus 98/2
RepID=C5SSJ4_SULSO
Length = 1124
Score = 77.8 bits (190), Expect = 4e-13
Identities = 39/108 (36%), Positives = 61/108 (56%)
Frame = +2
Query: 209 ADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRD 388
++++ ++ W VI AYF GLVRQ L SYN+FV +Q ++DE +I
Sbjct: 3 SNLTIDERWRVIEAYFKSKGLVRQHLDSYNDFVRNKLQEIIDEQGEI------------- 49
Query: 389 APDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
P E + ++ G++R+ KP E++ + P +ARLRNLTY+ PL
Sbjct: 50 -PTEIPGLKVRLGKIRIGKPRVRESDRGEREISPMEARLRNLTYAAPL 96
[196][TOP]
>UniRef100_Q5JE32 DNA-directed RNA polymerase n=1 Tax=Thermococcus kodakarensis
RepID=Q5JE32_PYRKO
Length = 1123
Score = 77.4 bits (189), Expect = 6e-13
Identities = 43/107 (40%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Frame = +2
Query: 215 ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAP 394
++ ++ W V+ +Y+ E G VRQ L SYN F+ +Q +V+E ++V P
Sbjct: 12 LTPDELWLVMESYWKEKGFVRQHLDSYNAFIDHGLQDVVNEFGEVV-------------P 58
Query: 395 D-ENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
D N KV KFG++R+ +P F E G+ LYP AR+RNLTYS PL
Sbjct: 59 DIPNFKV--KFGKIRIGQPEFQEAQGQRRPLYPMDARIRNLTYSAPL 103
[197][TOP]
>UniRef100_C9J2Y9 Putative uncharacterized protein POLR2B n=1 Tax=Homo sapiens
RepID=C9J2Y9_HUMAN
Length = 100
Score = 77.0 bits (188), Expect = 8e-13
Identities = 39/95 (41%), Positives = 62/95 (65%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
+E +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I L E
Sbjct: 4 DEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDLQAE 63
Query: 365 DQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNG 469
Q+ G +E + ++KF Q+ +SKP E +G
Sbjct: 64 AQHASGE--VEEPPRYLLKFEQIYLSKPTHWERDG 96
[198][TOP]
>UniRef100_A4YCQ8 DNA-directed RNA polymerase n=1 Tax=Metallosphaera sedula DSM 5348
RepID=A4YCQ8_METS5
Length = 1124
Score = 75.9 bits (185), Expect = 2e-12
Identities = 38/106 (35%), Positives = 60/106 (56%)
Frame = +2
Query: 215 ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAP 394
+S +D W ++ AYF GLVRQ L S+N+F+ +Q ++DE +I+ +PG
Sbjct: 2 LSVDDRWVIVEAYFKSRGLVRQHLDSFNDFIKNKLQEIIDEQGEII-----TEIPG---- 52
Query: 395 DENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
+ I+ G++RV KP E + + P +ARLRNLTY+ P+
Sbjct: 53 -----LKIRLGKIRVGKPRVREADKGDKEITPMEARLRNLTYAAPI 93
[199][TOP]
>UniRef100_Q4Q6P8 DNA-directed RNA polymerase n=1 Tax=Leishmania major
RepID=Q4Q6P8_LEIMA
Length = 1185
Score = 75.5 bits (184), Expect = 2e-12
Identities = 43/125 (34%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = +2
Query: 158 EDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDE 337
+DG+ + D+E +PND D+ +ED WEVI+++F E GLV QQL SYN+F+ + + +++ E
Sbjct: 17 DDGIVDEHDDE--NPND-DLDSEDIWEVISSFFREKGLVHQQLDSYNDFL-MRIPKMI-E 71
Query: 338 SPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENN----GEAXTLYPNQARL 505
S ++ +DQY PG ++ + + + + P+ ++ G L+PN+ RL
Sbjct: 72 SMAVIPRQDDQYDPGVTMEEQRDQPRLVLQDVVIGNPSHQTHSYFTGGPLPPLFPNECRL 131
Query: 506 RNLTY 520
R++TY
Sbjct: 132 RDMTY 136
[200][TOP]
>UniRef100_A4I6A8 DNA-directed RNA polymerase n=1 Tax=Leishmania infantum
RepID=A4I6A8_LEIIN
Length = 1181
Score = 74.7 bits (182), Expect = 4e-12
Identities = 42/120 (35%), Positives = 74/120 (61%), Gaps = 4/120 (3%)
Frame = +2
Query: 173 NGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
+G+D+E +PND D+ +ED WEVI+++F E GLV QQL SYN+F+ + + +++ ES ++
Sbjct: 18 DGIDDE--NPND-DLDSEDIWEVISSFFREKGLVHQQLDSYNDFL-MRIPKMI-ESMAVI 72
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENN----GEAXTLYPNQARLRNLTY 520
+DQY PG ++ + + + + P+ ++ G L+PN+ RLR++TY
Sbjct: 73 PRQDDQYDPGVTMEEQRDQPRLVLQDVVIGNPSHQTHSYFAGGPLPPLFPNECRLRDMTY 132
[201][TOP]
>UniRef100_A4HIZ1 DNA-directed RNA polymerase n=1 Tax=Leishmania braziliensis
RepID=A4HIZ1_LEIBR
Length = 1185
Score = 73.9 bits (180), Expect = 6e-12
Identities = 43/125 (34%), Positives = 75/125 (60%), Gaps = 4/125 (3%)
Frame = +2
Query: 158 EDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDE 337
+DG + D+E +PND D+ +ED WEVI+++F E GLV QQL SYN+F+ + + +++ E
Sbjct: 17 DDGFIDERDDE--NPND-DLDSEDIWEVISSFFREKGLVHQQLDSYNDFL-MRIPKMI-E 71
Query: 338 SPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENN----GEAXTLYPNQARL 505
S ++ +DQY PG ++ + + + + P+ ++ G L+PN+ RL
Sbjct: 72 SMAVIPRQDDQYDPGVTMEEQRDQPRLVLQDVVIGNPSHQTHSYFAGGPLPPLFPNECRL 131
Query: 506 RNLTY 520
R++TY
Sbjct: 132 RDMTY 136
[202][TOP]
>UniRef100_Q583H5 DNA-directed RNA polymerase n=1 Tax=Trypanosoma brucei
RepID=Q583H5_9TRYP
Length = 1190
Score = 73.6 bits (179), Expect = 8e-12
Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Frame = +2
Query: 194 EDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQY 373
E+ N ADI +ED WE+I+++F E GLV QQ+ SYN+F+ + + R+ +IV +DQ+
Sbjct: 31 ENVNTADIDSEDIWEIISSFFREKGLVHQQVDSYNDFL-LRIPRMARSLLEIVPRQDDQF 89
Query: 374 VPGRDAPDENTKVVIKFGQLRVSKPNFTENNG----EAXTLYPNQARLRNLTY 520
PG E + + + V P+ E +G E L+PN+ RLR+LTY
Sbjct: 90 DPGVHVESEPDQYRLSLEDVVVGNPSH-EMSGFSRTEMHPLFPNECRLRDLTY 141
[203][TOP]
>UniRef100_C9ZN35 DNA-directed RNA polymerase II subunit 2, putative n=1
Tax=Trypanosoma brucei gambiense DAL972
RepID=C9ZN35_TRYBG
Length = 1189
Score = 73.6 bits (179), Expect = 8e-12
Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Frame = +2
Query: 194 EDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQY 373
E+ N ADI +ED WE+I+++F E GLV QQ+ SYN+F+ + + R+ +IV +DQ+
Sbjct: 30 ENVNTADIDSEDIWEIISSFFREKGLVHQQVDSYNDFL-LRIPRMARSLLEIVPRQDDQF 88
Query: 374 VPGRDAPDENTKVVIKFGQLRVSKPNFTENNG----EAXTLYPNQARLRNLTY 520
PG E + + + V P+ E +G E L+PN+ RLR+LTY
Sbjct: 89 DPGVHVESEPDQYRLSLEDVVVGNPSH-EMSGFSRTEMHPLFPNECRLRDLTY 140
[204][TOP]
>UniRef100_A9CSV4 DNA-directed RNA polymerase n=1 Tax=Enterocytozoon bieneusi H348
RepID=A9CSV4_ENTBH
Length = 1138
Score = 72.4 bits (176), Expect = 2e-11
Identities = 39/100 (39%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Frame = +2
Query: 224 EDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDEN 403
E+ W +I ++FD+ GLVRQQL S+N+FV + MQ ++DE+ I + + +P E
Sbjct: 19 ENNWAIITSFFDQKGLVRQQLDSFNQFVKIKMQEIIDENSIISV----KSIPTAGNSIER 74
Query: 404 TKVVIKFGQLRVSKPNF-TENNGEAXTLYPNQARLRNLTY 520
++ + FGQ+ + P TE +G + + PN+ARLR+LTY
Sbjct: 75 -EIKLYFGQISILGPPINTEIDGTSSKILPNEARLRDLTY 113
[205][TOP]
>UniRef100_Q4CRQ2 DNA-directed RNA polymerase II subunit 2, putative (Fragment) n=1
Tax=Trypanosoma cruzi RepID=Q4CRQ2_TRYCR
Length = 617
Score = 72.0 bits (175), Expect = 2e-11
Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Frame = +2
Query: 158 EDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDE 337
EDG VD E+ DI +ED WE+I+++F E GLV QQ+ SYN+F+ + + R+
Sbjct: 17 EDGADYTVDGEHA--GSTDIDSEDIWEIISSFFREKGLVHQQIDSYNDFL-LRIPRMARS 73
Query: 338 SPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE---NNGEAXTLYPNQARLR 508
+IV ++Q+ PG E + + + + P+ + E L+PN+ RLR
Sbjct: 74 LLEIVPRQDEQFEPGTQTETEPDQYRLSLEDVVIGNPSHEVSGFSRREMHPLFPNECRLR 133
Query: 509 NLTY 520
+LTY
Sbjct: 134 DLTY 137
[206][TOP]
>UniRef100_A8AA81 DNA-directed RNA polymerase n=1 Tax=Ignicoccus hospitalis KIN4/I
RepID=A8AA81_IGNH4
Length = 1132
Score = 70.5 bits (171), Expect = 7e-11
Identities = 38/103 (36%), Positives = 59/103 (57%)
Frame = +2
Query: 224 EDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDEN 403
ED W ++ AYF E GLV QQL+SYN+FV+ TMQ+L++E G P E
Sbjct: 11 EDRWAIMRAYFKEKGLVSQQLESYNKFVTETMQKLIEEL-------------GEVEPFE- 56
Query: 404 TKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
+ ++F ++R +P E +G + P + R+R+LTY+ P+
Sbjct: 57 SGYKLEFIKIRYGEPIIKEKSGGTRPVTPTECRIRDLTYAAPI 99
[207][TOP]
>UniRef100_Q976A4 DNA-directed RNA polymerase n=1 Tax=Sulfolobus tokodaii
RepID=Q976A4_SULTO
Length = 1126
Score = 70.1 bits (170), Expect = 9e-11
Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Frame = +2
Query: 215 ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAP 394
++ + WE++ ++F GLVRQ L S+N+F+ +Q+++DE +I+ +PG
Sbjct: 3 LTVNERWEIVKSFFKLRGLVRQHLDSFNDFLRNKLQQIIDEQGEII-----TEIPG---- 53
Query: 395 DENTKVVIKFGQLRVSKPNFTE-NNGEAXTLYPNQARLRNLTYSTPL 532
+ IK G++R +P E + G L P +ARLRNLTY+ PL
Sbjct: 54 -----LKIKLGKIRYDRPGIRETDKGPPKELTPLEARLRNLTYAVPL 95
[208][TOP]
>UniRef100_Q58444 DNA-directed RNA polymerase subunit B'' n=1 Tax=Methanocaldococcus
jannaschii RepID=RPOB2_METJA
Length = 498
Score = 70.1 bits (170), Expect = 9e-11
Identities = 37/99 (37%), Positives = 58/99 (58%)
Frame = +2
Query: 236 EVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVV 415
E+++AYF EHGL+ Q++SYN+FV +Q+++DE I E + G
Sbjct: 6 ELVDAYFKEHGLIDHQIESYNDFVENRLQKIIDEVGYI----ETEITGG---------YK 52
Query: 416 IKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
+K G+++V KP E +G + P +AR+R+LTYS PL
Sbjct: 53 VKLGKIKVGKPVIKEADGSIRPITPMEARIRDLTYSVPL 91
[209][TOP]
>UniRef100_UPI000196666C hypothetical protein METSMIF1_00898 n=1 Tax=Methanobrevibacter
smithii DSM 2374 RepID=UPI000196666C
Length = 514
Score = 69.7 bits (169), Expect = 1e-10
Identities = 35/100 (35%), Positives = 58/100 (58%)
Frame = +2
Query: 224 EDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDEN 403
E+ W++++A+FD++ LV ++SYN+F++ +Q ++D + I L EN
Sbjct: 3 ENNWKLVDAFFDKYDLVDHHIKSYNDFINSGIQNIIDITEPITL--------------EN 48
Query: 404 TKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYS 523
K +K G+L + KP E +G +YP +ARLRNL YS
Sbjct: 49 GKYTLKTGKLFIEKPFTKEADGSKSMIYPAEARLRNLNYS 88
[210][TOP]
>UniRef100_A5ULN8 DNA-dependent RNA polymerase, subunit B, RpoB n=1
Tax=Methanobrevibacter smithii ATCC 35061
RepID=A5ULN8_METS3
Length = 514
Score = 69.7 bits (169), Expect = 1e-10
Identities = 35/100 (35%), Positives = 58/100 (58%)
Frame = +2
Query: 224 EDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDEN 403
E+ W++++A+FD++ LV ++SYN+F++ +Q ++D + I L EN
Sbjct: 3 ENNWKLVDAFFDKYDLVDHHIKSYNDFINSGIQNIIDITEPITL--------------EN 48
Query: 404 TKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYS 523
K +K G+L + KP E +G +YP +ARLRNL YS
Sbjct: 49 GKYTLKTGKLFIEKPFTKEADGSKSMIYPAEARLRNLNYS 88
[211][TOP]
>UniRef100_B9AEP8 Putative uncharacterized protein n=1 Tax=Methanobrevibacter smithii
DSM 2375 RepID=B9AEP8_METSM
Length = 514
Score = 69.7 bits (169), Expect = 1e-10
Identities = 35/100 (35%), Positives = 58/100 (58%)
Frame = +2
Query: 224 EDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDEN 403
E+ W++++A+FD++ LV ++SYN+F++ +Q ++D + I L EN
Sbjct: 3 ENNWKLVDAFFDKYDLVDHHIKSYNDFINSGIQNIIDITEPITL--------------EN 48
Query: 404 TKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYS 523
K +K G+L + KP E +G +YP +ARLRNL YS
Sbjct: 49 GKYTLKTGKLFIEKPFTKEADGSKSMIYPAEARLRNLNYS 88
[212][TOP]
>UniRef100_O27123 DNA-directed RNA polymerase subunit B'' n=1 Tax=Methanothermobacter
thermautotrophicus str. Delta H RepID=RPOB2_METTH
Length = 519
Score = 69.7 bits (169), Expect = 1e-10
Identities = 36/100 (36%), Positives = 56/100 (56%)
Frame = +2
Query: 224 EDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDEN 403
+ AW +++A+FD++ LV + SYN+FVS +Q ++D S I L E
Sbjct: 9 KSAWGLVDAFFDKYDLVDHHIHSYNDFVSNRIQEIIDTSEPIEL--------------EQ 54
Query: 404 TKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYS 523
K ++ G++ + KP E +G +YP +ARLRNLTYS
Sbjct: 55 GKYRVETGKVSIEKPFIKEADGSKSKIYPTEARLRNLTYS 94
[213][TOP]
>UniRef100_P09844 DNA-directed RNA polymerase subunit B'' n=1 Tax=Methanothermobacter
thermautotrophicus str. Winter RepID=RPOB2_METTW
Length = 515
Score = 69.3 bits (168), Expect = 2e-10
Identities = 35/100 (35%), Positives = 56/100 (56%)
Frame = +2
Query: 224 EDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDEN 403
+ AW +++A+FD++ LV + SYN+FVS +Q ++D S I L E
Sbjct: 3 KSAWGLVDAFFDKYDLVDHHIHSYNDFVSNRIQEIIDTSEPIEL--------------EQ 48
Query: 404 TKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYS 523
+ ++ G++ + KP E +G +YP +ARLRNLTYS
Sbjct: 49 GQYTVETGKVTIEKPFIKEADGSKSKIYPTEARLRNLTYS 88
[214][TOP]
>UniRef100_C9RDL0 RNA polymerase beta subunit n=1 Tax=Methanocaldococcus vulcanius M7
RepID=C9RDL0_9EURY
Length = 495
Score = 68.9 bits (167), Expect = 2e-10
Identities = 35/99 (35%), Positives = 57/99 (57%)
Frame = +2
Query: 236 EVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVV 415
E+I+AYF EHGL+ Q++SYN+FV +Q ++DE G + +
Sbjct: 3 EMIDAYFKEHGLIDHQIESYNDFVENRLQSIIDE-------------VGYIETEISGGYK 49
Query: 416 IKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
+K G++++ KP E +G + + P +AR+R+LTYS PL
Sbjct: 50 VKLGKIKIGKPVIKEADGSSRKITPMEARIRDLTYSVPL 88
[215][TOP]
>UniRef100_C5U6G2 RNA polymerase beta subunit n=1 Tax=Methanocaldococcus infernus ME
RepID=C5U6G2_9EURY
Length = 493
Score = 68.9 bits (167), Expect = 2e-10
Identities = 39/98 (39%), Positives = 58/98 (59%)
Frame = +2
Query: 239 VINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVI 418
+I+AYF EH LV QL+SYN+FV +Q++VDE + D +P E KV
Sbjct: 1 MIDAYFKEHSLVEHQLESYNDFVENRLQKIVDEIGYV-----DTDIP------EGFKV-- 47
Query: 419 KFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
KFG++++ KP E +G + P +AR+R +TYS P+
Sbjct: 48 KFGKIKLGKPIIKEADGSIREITPMEARIREITYSVPI 85
[216][TOP]
>UniRef100_A8MBV1 DNA-directed RNA polymerase n=1 Tax=Caldivirga maquilingensis
IC-167 RepID=A8MBV1_CALMQ
Length = 1131
Score = 68.6 bits (166), Expect = 3e-10
Identities = 37/106 (34%), Positives = 56/106 (52%)
Frame = +2
Query: 215 ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAP 394
I++ED W ++ +Y +GLVR Q+ S+N+FV ++ +V E D
Sbjct: 27 IASEDRWTLVESYVRSYGLVRHQIDSFNDFVDRKLKEIVQEF-------------NIDLG 73
Query: 395 DENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
D V +KF + V KP F E G +YP +ARLRN+TY+ P+
Sbjct: 74 D----VKVKFIDVEVGKPRFKEPTGVENVIYPMEARLRNITYAAPM 115
[217][TOP]
>UniRef100_C7P939 RNA polymerase beta subunit n=1 Tax=Methanocaldococcus fervens AG86
RepID=C7P939_METFA
Length = 497
Score = 68.6 bits (166), Expect = 3e-10
Identities = 34/99 (34%), Positives = 57/99 (57%)
Frame = +2
Query: 236 EVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVV 415
E+++AYF EHGL+ Q++SYN+FV +Q+++DE G + +
Sbjct: 3 ELVDAYFKEHGLIDHQIESYNDFVENRLQKIIDE-------------VGYIETEISGGFK 49
Query: 416 IKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
+K G++++ KP E +G + P +AR+R+LTYS PL
Sbjct: 50 VKLGKVKIGKPVIKEADGSIRPITPMEARIRDLTYSVPL 88
[218][TOP]
>UniRef100_A0B556 DNA-directed RNA polymerase, subunit B' n=1 Tax=Methanosaeta
thermophila PT RepID=A0B556_METTP
Length = 496
Score = 67.0 bits (162), Expect = 8e-10
Identities = 37/95 (38%), Positives = 52/95 (54%)
Frame = +2
Query: 248 AYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFG 427
AYF + LV + S+NEF+ +Q+++DE I E+ YV K G
Sbjct: 10 AYFTKDKLVHHHINSFNEFIDRGLQKVIDEVRIIETNIENTYV--------------KLG 55
Query: 428 QLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
++RV KP E +G LYPN ARLRNLTY++P+
Sbjct: 56 KIRVEKPVVMEADGSVERLYPNDARLRNLTYASPI 90
[219][TOP]
>UniRef100_P11513 DNA-directed RNA polymerase subunit B n=1 Tax=Sulfolobus
acidocaldarius RepID=RPOB_SULAC
Length = 1126
Score = 66.6 bits (161), Expect = 1e-09
Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Frame = +2
Query: 215 ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAP 394
+ E W + ++F GLVRQ L S+N+F+ +Q+++ E +IV VPG
Sbjct: 2 LDTESRWAIAESFFKTRGLVRQHLDSFNDFLRNKLQQVIYEQGEIV-----TEVPG---- 52
Query: 395 DENTKVVIKFGQLRVSKPNFTE-NNGEAXTLYPNQARLRNLTYSTPL 532
+ IK G++R KP+ E + G + P +ARLRNLTYS+P+
Sbjct: 53 -----LKIKLGKIRYEKPSIRETDKGPMREITPMEARLRNLTYSSPI 94
[220][TOP]
>UniRef100_Q7XTQ7 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q7XTQ7_ORYSJ
Length = 1343
Score = 65.9 bits (159), Expect = 2e-09
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Frame = +2
Query: 236 EVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVV 415
E ++FDE GL+ Q+ SYNEFVS +Q L D ++ + E Y P P +
Sbjct: 153 EASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTV--EPSYDPSNRGPGGWRHAI 210
Query: 416 IKFGQLRVSKPNFTEN----NGEAXTLYPNQARLRNLTYSTPL 532
IKFG++++ +P F + + ++ L P ARL+N+TYS+ +
Sbjct: 211 IKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKM 253
[221][TOP]
>UniRef100_Q7F9D6 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q7F9D6_ORYSJ
Length = 1316
Score = 65.9 bits (159), Expect = 2e-09
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Frame = +2
Query: 236 EVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVV 415
E ++FDE GL+ Q+ SYNEFVS +Q L D ++ + E Y P P +
Sbjct: 153 EASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTV--EPSYDPSNRGPGGWRHAI 210
Query: 416 IKFGQLRVSKPNFTEN----NGEAXTLYPNQARLRNLTYSTPL 532
IKFG++++ +P F + + ++ L P ARL+N+TYS+ +
Sbjct: 211 IKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKM 253
[222][TOP]
>UniRef100_Q259Y6 DNA-directed RNA polymerase n=1 Tax=Oryza sativa RepID=Q259Y6_ORYSA
Length = 1343
Score = 65.9 bits (159), Expect = 2e-09
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Frame = +2
Query: 236 EVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVV 415
E ++FDE GL+ Q+ SYNEFVS +Q L D ++ + E Y P P +
Sbjct: 153 EASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTV--EPSYDPSNRGPGGWRHAI 210
Query: 416 IKFGQLRVSKPNFTEN----NGEAXTLYPNQARLRNLTYSTPL 532
IKFG++++ +P F + + ++ L P ARL+N+TYS+ +
Sbjct: 211 IKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKM 253
[223][TOP]
>UniRef100_Q0J9N2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Oryza sativa
Japonica Group RepID=Q0J9N2_ORYSJ
Length = 1270
Score = 65.9 bits (159), Expect = 2e-09
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Frame = +2
Query: 236 EVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVV 415
E ++FDE GL+ Q+ SYNEFVS +Q L D ++ + E Y P P +
Sbjct: 107 EASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTV--EPSYDPSNRGPGGWRHAI 164
Query: 416 IKFGQLRVSKPNFTEN----NGEAXTLYPNQARLRNLTYSTPL 532
IKFG++++ +P F + + ++ L P ARL+N+TYS+ +
Sbjct: 165 IKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKM 207
[224][TOP]
>UniRef100_B9FCT0 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9FCT0_ORYSJ
Length = 1185
Score = 65.9 bits (159), Expect = 2e-09
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Frame = +2
Query: 236 EVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVV 415
E ++FDE GL+ Q+ SYNEFVS +Q L D ++ + E Y P P +
Sbjct: 89 EASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTV--EPSYDPSNRGPGGWRHAI 146
Query: 416 IKFGQLRVSKPNFTEN----NGEAXTLYPNQARLRNLTYSTPL 532
IKFG++++ +P F + + ++ L P ARL+N+TYS+ +
Sbjct: 147 IKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKM 189
[225][TOP]
>UniRef100_B8AV78 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group
RepID=B8AV78_ORYSI
Length = 1177
Score = 65.9 bits (159), Expect = 2e-09
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Frame = +2
Query: 236 EVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVV 415
E ++FDE GL+ Q+ SYNEFVS +Q L D ++ + E Y P P +
Sbjct: 89 EASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTV--EPSYDPSNRGPGGWRHAI 146
Query: 416 IKFGQLRVSKPNFTEN----NGEAXTLYPNQARLRNLTYSTPL 532
IKFG++++ +P F + + ++ L P ARL+N+TYS+ +
Sbjct: 147 IKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKM 189
[226][TOP]
>UniRef100_A6UV52 RNA polymerase beta subunit n=1 Tax=Methanococcus aeolicus Nankai-3
RepID=A6UV52_META3
Length = 510
Score = 65.9 bits (159), Expect = 2e-09
Identities = 35/98 (35%), Positives = 57/98 (58%)
Frame = +2
Query: 239 VINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVI 418
+++ +F E+ LV + SYN+FV ++Q+++DE+ P + V G +
Sbjct: 6 IVDEFFKENSLVEHHINSYNKFVENSIQKVIDEAA-----PIEAEVKGG--------FKV 52
Query: 419 KFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
KFG++RV KP E +G +YP +AR+RNL+YS PL
Sbjct: 53 KFGKVRVGKPINKEADGSVKEIYPVEARIRNLSYSAPL 90
[227][TOP]
>UniRef100_A2SSM6 DNA-directed RNA polymerase, subunit B' n=1 Tax=Methanocorpusculum
labreanum Z RepID=A2SSM6_METLZ
Length = 516
Score = 65.9 bits (159), Expect = 2e-09
Identities = 37/95 (38%), Positives = 53/95 (55%)
Frame = +2
Query: 248 AYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFG 427
AYF + + R QL SYN FV +Q++VDE I E + V + V ++ G
Sbjct: 10 AYFSQEHVARHQLDSYNNFVQFNLQKVVDEQR----IVETEIV---NRGKNQEAVWVELG 62
Query: 428 QLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
++RV KP E +G LYP +ARLRNL+Y+ P+
Sbjct: 63 KIRVEKPIVREADGSQSKLYPAEARLRNLSYAAPM 97
[228][TOP]
>UniRef100_C5Y8Y9 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5Y8Y9_SORBI
Length = 1239
Score = 65.1 bits (157), Expect = 3e-09
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Frame = +2
Query: 155 NEDGVYNGVDEEYED-PNDADISAEDAW--EVINAYFDEHGLVRQQLQSYNEFVSVTMQR 325
N+D E Y + P D + + + + E ++FDE GL+ Q+ SYNEFVS +Q
Sbjct: 73 NDDVNGKSSSEPYSNAPIDMSVESLEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQE 132
Query: 326 LVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLY-PNQAR 502
L D ++++ E Y P + +IKFG++++ KP F E + P AR
Sbjct: 133 LFDSLGEVIV--EPGYDPSKKGSGGWKHAIIKFGRVKLEKPVFWTGKDEGSVDFKPWHAR 190
Query: 503 LRNLTYSTPL 532
L+N+TY++ L
Sbjct: 191 LQNMTYASRL 200
[229][TOP]
>UniRef100_B4FHF6 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FHF6_MAIZE
Length = 267
Score = 65.1 bits (157), Expect = 3e-09
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Frame = +2
Query: 236 EVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVV 415
E ++FDE GL+ Q+ SYNEFVS +Q L D ++++ E Y P + +
Sbjct: 93 EASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIV--EPGYDPSKKGSGSWKHAI 150
Query: 416 IKFGQLRVSKPNFTENNGEAXTLY-PNQARLRNLTYSTPL 532
IKFG++++ KP F E + P ARL+N+TY++ L
Sbjct: 151 IKFGRVKLEKPVFWTGKDEVSVDFKPWHARLQNMTYASRL 190
[230][TOP]
>UniRef100_Q8TRB5 DNA-directed RNA polymerase, subunit B n=1 Tax=Methanosarcina
acetivorans RepID=Q8TRB5_METAC
Length = 550
Score = 65.1 bits (157), Expect = 3e-09
Identities = 35/95 (36%), Positives = 51/95 (53%)
Frame = +2
Query: 248 AYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFG 427
AYF +V+ + S+N+F+ +Q+++DE I ED Y +K G
Sbjct: 12 AYFTRDKIVQHHIDSFNKFIDYGLQKIIDEQKIIETDIEDTY--------------LKLG 57
Query: 428 QLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
++RV P E +G LYPN+ARLRNL+YS PL
Sbjct: 58 KIRVEHPVVKEADGAIEKLYPNEARLRNLSYSGPL 92
[231][TOP]
>UniRef100_Q2FPK1 DNA-directed RNA polymerase, subunit B' n=1 Tax=Methanospirillum
hungatei JF-1 RepID=Q2FPK1_METHJ
Length = 518
Score = 65.1 bits (157), Expect = 3e-09
Identities = 36/95 (37%), Positives = 52/95 (54%)
Frame = +2
Query: 248 AYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFG 427
AYF + R QL SYN F+ +Q++VDE +I D G+ N V ++ G
Sbjct: 10 AYFSREHVARHQLDSYNHFLLNNLQKVVDEQR---VIETDIETRGKG----NEPVSVELG 62
Query: 428 QLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
L++ KP E +G LYP +ARLRN+TY+ P+
Sbjct: 63 DLKILKPLVREADGSQSELYPGEARLRNITYAAPI 97
[232][TOP]
>UniRef100_C8SAT7 RNA polymerase beta subunit n=1 Tax=Ferroglobus placidus DSM 10642
RepID=C8SAT7_FERPL
Length = 491
Score = 64.7 bits (156), Expect = 4e-09
Identities = 37/95 (38%), Positives = 54/95 (56%)
Frame = +2
Query: 248 AYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFG 427
AYF LVR QL S+N F+ +Q+++DE I L ENT VV+ G
Sbjct: 10 AYFTHDRLVRHQLDSFNRFIEERLQKVIDEQGIIEL------------DIENTYVVL--G 55
Query: 428 QLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
++++ +P E +G LYP +ARLRNLTY++P+
Sbjct: 56 EVKLDRPKVKEADGTEHLLYPVEARLRNLTYASPI 90
[233][TOP]
>UniRef100_Q07DU9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Zea mays
RepID=Q07DU9_MAIZE
Length = 1170
Score = 64.3 bits (155), Expect = 5e-09
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Frame = +2
Query: 236 EVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVV 415
E ++FDE GL+ Q+ SYNEFVS +Q L D ++++ E Y P + +
Sbjct: 34 EASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIV--EPGYDPSKKGSGGWKHAI 91
Query: 416 IKFGQLRVSKPNFTENNGEAXTLY-PNQARLRNLTYSTPL 532
IKFG++++ KP F E + P ARL+N+TY++ L
Sbjct: 92 IKFGRVKLEKPVFWTGKDEGSVDFKPWHARLQNMTYASRL 131
[234][TOP]
>UniRef100_C5WRS0 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5WRS0_SORBI
Length = 1228
Score = 64.3 bits (155), Expect = 5e-09
Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Frame = +2
Query: 173 NGVDEEYEDPNDADISAED----AWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDES 340
NG E D+S E E ++FDE GL+ Q+ SYN+FVS +Q L D
Sbjct: 67 NGKSSEPYSNAPIDLSVESLEKFCKEASRSFFDEVGLISHQINSYNDFVSHGLQELFDSL 126
Query: 341 PDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLY-PNQARLRNLT 517
++++ E Y P + +IKFG++++ KP F E + P ARL+N+T
Sbjct: 127 GEVIV--EPGYDPSKKGSGGWKHAIIKFGRVKLEKPVFWTGKDEGSVDFKPWHARLQNMT 184
Query: 518 YSTPL 532
Y++ L
Sbjct: 185 YASRL 189
[235][TOP]
>UniRef100_C9JZW8 Putative uncharacterized protein POLR2B n=1 Tax=Homo sapiens
RepID=C9JZW8_HUMAN
Length = 76
Score = 64.3 bits (155), Expect = 5e-09
Identities = 30/66 (45%), Positives = 46/66 (69%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
+E +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I L E
Sbjct: 4 DEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDLQAE 63
Query: 365 DQYVPG 382
Q+ G
Sbjct: 64 AQHASG 69
[236][TOP]
>UniRef100_A7I9N8 DNA-directed RNA polymerase n=1 Tax=Candidatus Methanoregula boonei
6A8 RepID=A7I9N8_METB6
Length = 522
Score = 63.5 bits (153), Expect = 9e-09
Identities = 36/95 (37%), Positives = 54/95 (56%)
Frame = +2
Query: 248 AYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFG 427
AYF + R QL S+N F++ +Q++V+E +I D GR+ N V ++ G
Sbjct: 13 AYFAREHVARHQLDSFNYFLTENLQKVVNEQK---IIETDIENRGRN----NDPVWVELG 65
Query: 428 QLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
+ V KP E +G LYP++ARLRNLTY+ P+
Sbjct: 66 NIEVKKPLVREADGSQGELYPSEARLRNLTYAAPI 100
[237][TOP]
>UniRef100_A2E7H8 DNA-directed RNA polymerase n=1 Tax=Trichomonas vaginalis G3
RepID=A2E7H8_TRIVA
Length = 1177
Score = 63.2 bits (152), Expect = 1e-08
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Frame = +2
Query: 191 YEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQ 370
Y D N+ + S D W VI+ +F+ GLV+QQL+SYN F++ + ++D+ I L DQ
Sbjct: 8 YVDANEDNWSQNDMWMVISKFFENRGLVKQQLKSYNSFINNCVDSVLDDKGHITL-QSDQ 66
Query: 371 YVPGR---------DAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYS 523
+ + D D+ + I FG V +P E L P +RLR+L+YS
Sbjct: 67 LLANKIKMDFNSNDDDEDQGKTIHISFGTSTVLRP----TTPEGKQLTPMISRLRSLSYS 122
[238][TOP]
>UniRef100_Q2NEK2 RpoB2 n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NEK2_METST
Length = 502
Score = 62.4 bits (150), Expect = 2e-08
Identities = 31/100 (31%), Positives = 56/100 (56%)
Frame = +2
Query: 224 EDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDEN 403
++AW +++++FDE+ +V ++SYN+F+ +Q +VD + I L ++
Sbjct: 3 KNAWSLVDSFFDEYDIVDHHIRSYNDFLDNKIQEIVDITEPITL--------------DH 48
Query: 404 TKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYS 523
+ IK G + + KP E +G + P++ARLRNL YS
Sbjct: 49 GEYTIKTGDVEIVKPFIKEADGSKSIIEPSEARLRNLNYS 88
[239][TOP]
>UniRef100_B9RNV9 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9RNV9_RICCO
Length = 1203
Score = 62.0 bits (149), Expect = 3e-08
Identities = 32/94 (34%), Positives = 55/94 (58%)
Frame = +2
Query: 251 YFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQ 430
+F+E+GL+ Q+ SYN+F++ +Q+ D ++V+ E Y P + +E +KFG+
Sbjct: 70 FFNEYGLISHQINSYNDFINNGIQKAFDSFGELVV--EPGYDPSKKGENEWRYASVKFGK 127
Query: 431 LRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
+ + KP F E L P ARL+N+TYS+ +
Sbjct: 128 VALEKPTFWSGADEHKML-PRHARLQNMTYSSKM 160
[240][TOP]
>UniRef100_Q2GU47 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
RepID=Q2GU47_CHAGB
Length = 1182
Score = 61.6 bits (148), Expect = 3e-08
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +2
Query: 182 DEEYEDPNDAD--ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVL 355
+ E ED D D I+ ED W+VI ++FD GLV QQ+ S++EF S T+Q LVDE
Sbjct: 31 EAELEDAEDTDDTITTEDTWDVIQSHFDCKGLVAQQIDSFDEFTSTTIQSLVDEVTKRAR 90
Query: 356 IPEDQYVPGRDAPDENTKVVIKFGQ 430
+ ++ V +D +E + + + G+
Sbjct: 91 VAINEEVALKDMDEEQQEYMARTGE 115
[241][TOP]
>UniRef100_Q6LXJ0 DNA-directed RNA polymerase subunit B n=1 Tax=Methanococcus
maripaludis RepID=Q6LXJ0_METMP
Length = 499
Score = 61.6 bits (148), Expect = 3e-08
Identities = 33/98 (33%), Positives = 53/98 (54%)
Frame = +2
Query: 239 VINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVI 418
V++A+F E+ LV+ + SY++FV +QR++DE + + Y +
Sbjct: 6 VVDAFFKENSLVKHHIDSYDDFVKNKIQRIIDEVTGVETEIKGGYK-------------V 52
Query: 419 KFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
FG +RV+KP E +G + P +AR+RNL YS PL
Sbjct: 53 SFGNVRVTKPINKEADGSVKPITPMEARIRNLAYSAPL 90
[242][TOP]
>UniRef100_Q17U53 DNA-directed RNA polymerase, putative n=1 Tax=Solanum bulbocastanum
RepID=Q17U53_SOLBU
Length = 1018
Score = 60.8 bits (146), Expect = 6e-08
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Frame = +2
Query: 161 DGVYNGVDEEYEDPNDADISAEDAWEVINAY------------FDEHGLVRQQLQSYNEF 304
DG++ D ++++ D D + + A E+ + F+++G++ Q+ SYN+F
Sbjct: 37 DGLFEVDDYDWDEDEDEDDNLDMAKELGGGFLRNFCKKASAGFFEKYGVISHQIDSYNDF 96
Query: 305 VSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNF-------TEN 463
+ +QR+ D +I + P Y P + + +KFG++ + +P F N
Sbjct: 97 IRYGIQRVFDSVGEIHVEPG--YDPSKKGEGDWKHASVKFGKVTLDRPKFWAGEKFSAYN 154
Query: 464 NGEAXTLYPNQARLRNLTYS 523
E L+P ARL+N+TYS
Sbjct: 155 GEEYLNLWPRHARLQNMTYS 174
[243][TOP]
>UniRef100_A3CS82 DNA-directed RNA polymerase n=1 Tax=Methanoculleus marisnigri JR1
RepID=A3CS82_METMJ
Length = 513
Score = 60.8 bits (146), Expect = 6e-08
Identities = 36/95 (37%), Positives = 54/95 (56%)
Frame = +2
Query: 248 AYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFG 427
AYF + R QL SYN F+ +Q++VDE I E + G++A V ++ G
Sbjct: 4 AYFAREHVARHQLDSYNNFLLHNLQKVVDEQRVIETDIETRG-KGKEA------VWVELG 56
Query: 428 QLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
++ V KP E +G L+P++ARLRNLTY+ P+
Sbjct: 57 KVEVKKPLVREADGSQSELFPSEARLRNLTYAAPI 91
[244][TOP]
>UniRef100_B9IL57 DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa
RepID=B9IL57_POPTR
Length = 1160
Score = 60.5 bits (145), Expect = 7e-08
Identities = 30/94 (31%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Frame = +2
Query: 251 YFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQ 430
+FDE+GL+ Q+ SYN F++ +QR+ D ++ + E Y + E + ++FG+
Sbjct: 34 FFDEYGLISHQINSYNSFINSGLQRVFDSFGEVAV--EPGYDSSKQKDGEWRRASVRFGK 91
Query: 431 LRVSKPNF---TENNGEAXTLYPNQARLRNLTYS 523
+ + +P+F T ++ E ++P ARL+N+TYS
Sbjct: 92 VTLDRPSFWGGTSSDAE-HNMFPRHARLQNMTYS 124
[245][TOP]
>UniRef100_A3DMP3 DNA-directed RNA polymerase n=1 Tax=Staphylothermus marinus F1
RepID=A3DMP3_STAMF
Length = 1156
Score = 60.5 bits (145), Expect = 7e-08
Identities = 34/103 (33%), Positives = 52/103 (50%)
Frame = +2
Query: 224 EDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDEN 403
+D W V+ ++F+E GLVRQ L SYN F+ + ++ E +I + N
Sbjct: 11 DDLWTVMKSFFEEFGLVRQHLDSYNRFIDHLLPEIISEHKEITI-------------SGN 57
Query: 404 TKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
K++IK G S+P G T+ P + RLRN TY+ P+
Sbjct: 58 RKLLIK-GYRIGSEPKIRTIEGFERTVTPLECRLRNFTYAVPI 99
[246][TOP]
>UniRef100_Q54IZ9 Ddi rpc2 intein n=1 Tax=Dictyostelium discoideum RepID=RPC2_DICDI
Length = 1608
Score = 60.5 bits (145), Expect = 7e-08
Identities = 36/129 (27%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
Frame = +2
Query: 155 NEDGVYNG-VDEEYEDPNDADI--SAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQR 325
N D ++ G +DE Y D E+ W+++ A+ GLV+Q + S+N F++V M++
Sbjct: 11 NPDFLHKGSMDELYNISKLTDDIKPVEEKWKLVPAFMKCRGLVKQHIDSFNFFINVEMKK 70
Query: 326 LVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARL 505
+V + + + Y ++F + V P TE+N ++ L P + RL
Sbjct: 71 IVKANERLTAENDPSYF-------------VRFTDINVGSPTSTEDNLDSVQLTPQRCRL 117
Query: 506 RNLTYSTPL 532
R++TYS P+
Sbjct: 118 RDMTYSAPI 126
[247][TOP]
>UniRef100_C4LUK7 DNA-directed RNA polymerase n=1 Tax=Entamoeba histolytica HM-1:IMSS
RepID=C4LUK7_ENTHI
Length = 1170
Score = 59.7 bits (143), Expect = 1e-07
Identities = 35/106 (33%), Positives = 57/106 (53%)
Frame = +2
Query: 215 ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAP 394
I E W +I+A+F E+GLV+QQL SYN F+ + ++ I + + V G A
Sbjct: 10 IQPEQFWYLIDAHFKENGLVKQQLSSYNNFIKKVRDVITSDTTKIEI--SNAEVLGISAN 67
Query: 395 DENTKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
DE ++ + P + + + +L+P++ARLR+LTYS L
Sbjct: 68 DEEEHTIVLTDPI-FHFPKVSTGSKASASLFPHEARLRSLTYSCQL 112
[248][TOP]
>UniRef100_A7AM79 DNA-directed RNA polymerase, beta subunit, putative n=1 Tax=Babesia
bovis RepID=A7AM79_BABBO
Length = 1171
Score = 59.3 bits (142), Expect = 2e-07
Identities = 32/103 (31%), Positives = 52/103 (50%)
Frame = +2
Query: 224 EDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDEN 403
+D W+++ Y G+ RQ + SYN FV + E +IV P ++ + D
Sbjct: 37 KDKWKILPCYMGMRGIARQHINSYNNFV-------LREIKEIVNAPSNKMLKS----DAC 85
Query: 404 TKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
K I+F + V +P +ENN + L P R+R++TYS P+
Sbjct: 86 KKFYIEFIDINVGEPTMSENNNKPILLTPQLCRMRDITYSAPM 128
[249][TOP]
>UniRef100_C9JMN3 Putative uncharacterized protein POLR2B n=1 Tax=Homo sapiens
RepID=C9JMN3_HUMAN
Length = 64
Score = 59.3 bits (142), Expect = 2e-07
Identities = 26/57 (45%), Positives = 43/57 (75%), Gaps = 3/57 (5%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESP 343
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAP 63
[250][TOP]
>UniRef100_B3S5S8 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
RepID=B3S5S8_TRIAD
Length = 1016
Score = 58.9 bits (141), Expect = 2e-07
Identities = 29/103 (28%), Positives = 54/103 (52%)
Frame = +2
Query: 224 EDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDEN 403
ED W+++ A+ GLV+Q + SYN F++ ++++V+ + + D +
Sbjct: 29 EDKWKLVPAFLKVKGLVKQHIDSYNYFINCEIKKIVNANNKV-------------TTDAD 75
Query: 404 TKVVIKFGQLRVSKPNFTENNGEAXTLYPNQARLRNLTYSTPL 532
T +K+ + V P+ E+ YP++ RLR+LTYS P+
Sbjct: 76 TVFYLKYLNVYVGNPDIEESFNVTKPTYPHECRLRDLTYSAPI 118