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[1][TOP]
>UniRef100_Q1L5B0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Platanus orientalis
RepID=Q1L5B0_PLAOI
Length = 923
Score = 199 bits (506), Expect = 8e-50
Identities = 98/152 (64%), Positives = 119/152 (78%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 182 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 241
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+PEDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GKEV
Sbjct: 242 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKEV 301
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 302 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 332
[2][TOP]
>UniRef100_Q1L6D2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Euptelea polyandra
RepID=Q1L6D2_9MAGN
Length = 874
Score = 198 bits (503), Expect = 2e-49
Identities = 97/152 (63%), Positives = 119/152 (78%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 269
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+PEDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 329
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360
[3][TOP]
>UniRef100_Q1L6C4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hibbertia scandens
RepID=Q1L6C4_9MAGN
Length = 873
Score = 198 bits (503), Expect = 2e-49
Identities = 97/152 (63%), Positives = 119/152 (78%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 269
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+PEDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 329
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360
[4][TOP]
>UniRef100_Q1L5Z7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Berberidopsis
corallina RepID=Q1L5Z7_9MAGN
Length = 853
Score = 198 bits (503), Expect = 2e-49
Identities = 97/152 (63%), Positives = 119/152 (78%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 269
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+PEDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 329
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360
[5][TOP]
>UniRef100_Q1L5Z6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Berberidopsis
beckleri RepID=Q1L5Z6_9MAGN
Length = 873
Score = 198 bits (503), Expect = 2e-49
Identities = 97/152 (63%), Positives = 119/152 (78%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 269
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+PEDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 329
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360
[6][TOP]
>UniRef100_Q1L5A8 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Nymphaea colorata RepID=Q1L5A8_9MAGN
Length = 431
Score = 198 bits (503), Expect = 2e-49
Identities = 97/152 (63%), Positives = 119/152 (78%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+TV VT+ KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 269
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+PEDDRDHYGNKR+DLAGPLL LFR FR++T++ K +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKTYVQKCVDNGKDV 329
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360
[7][TOP]
>UniRef100_A7PJ31 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
RepID=A7PJ31_VITVI
Length = 1220
Score = 198 bits (503), Expect = 2e-49
Identities = 97/152 (63%), Positives = 119/152 (78%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 316 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 375
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+PEDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 376 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 435
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 436 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 466
[8][TOP]
>UniRef100_A5C1N0 DNA-directed RNA polymerase n=2 Tax=Vitis RepID=A5C1N0_VITVI
Length = 1193
Score = 198 bits (503), Expect = 2e-49
Identities = 97/152 (63%), Positives = 119/152 (78%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 316 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 375
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+PEDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 376 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 435
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 436 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 466
[9][TOP]
>UniRef100_Q1L6B6 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Nepenthes maxima RepID=Q1L6B6_9CARY
Length = 667
Score = 197 bits (501), Expect = 3e-49
Identities = 97/152 (63%), Positives = 118/152 (77%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG TV VTR KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 211 VIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 270
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+PEDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 271 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDQGKDV 330
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 331 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 361
[10][TOP]
>UniRef100_Q1L6D6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dillenia
suffruticosa RepID=Q1L6D6_9MAGN
Length = 868
Score = 196 bits (499), Expect = 5e-49
Identities = 97/152 (63%), Positives = 119/152 (78%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 205 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 264
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+PEDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 265 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDV 324
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 325 NLQFA-IKAKPITSGLKYSLATGNWGQANAAG 355
[11][TOP]
>UniRef100_Q1L6A5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetracentron sinense
RepID=Q1L6A5_9MAGN
Length = 951
Score = 196 bits (499), Expect = 5e-49
Identities = 96/152 (63%), Positives = 119/152 (78%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 269
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL A+GR+PEDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 270 HRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDV 329
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360
[12][TOP]
>UniRef100_Q1L5B2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Eschscholzia
californica RepID=Q1L5B2_ESCCA
Length = 951
Score = 196 bits (499), Expect = 5e-49
Identities = 96/152 (63%), Positives = 119/152 (78%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+TV VTR KRI+YA++IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYII 269
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL A+GR+PEDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GKEV
Sbjct: 270 HRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKEV 329
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360
[13][TOP]
>UniRef100_Q1L6F0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Aextoxicon punctatum
RepID=Q1L6F0_9MAGN
Length = 873
Score = 196 bits (498), Expect = 7e-49
Identities = 96/152 (63%), Positives = 118/152 (77%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+ VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 210 VIQNHQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 269
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+PEDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 329
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360
[14][TOP]
>UniRef100_Q1L6E0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coriaria sarmentosa
RepID=Q1L6E0_9ROSI
Length = 952
Score = 196 bits (498), Expect = 7e-49
Identities = 97/152 (63%), Positives = 118/152 (77%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG TV VTR KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYII 269
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+PEDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDV 329
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360
[15][TOP]
>UniRef100_Q1L6C9 RNA polymerase II second largest subunit (Fragment) n=1 Tax=Gunnera
chilensis RepID=Q1L6C9_GUNCH
Length = 453
Score = 196 bits (498), Expect = 7e-49
Identities = 95/152 (62%), Positives = 119/152 (78%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+TV VT+ KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 269
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL A+GR+PEDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 270 HRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 329
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360
[16][TOP]
>UniRef100_Q1L5B1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Liriodendron
tulipifera RepID=Q1L5B1_LIRTU
Length = 942
Score = 196 bits (497), Expect = 9e-49
Identities = 96/152 (63%), Positives = 118/152 (77%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG TV VT+ KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 202 VIQNQQVALDYIGKRGQTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 261
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+PEDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 262 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDV 321
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 322 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 352
[17][TOP]
>UniRef100_A4RQU3 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus
CCE9901 RepID=A4RQU3_OSTLU
Length = 1174
Score = 196 bits (497), Expect = 9e-49
Identities = 96/151 (63%), Positives = 119/151 (78%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQSQ+VALD+IGKRG+ V V+R KRI+YAK+IL KE LPHVGV E E +K +F GY+I
Sbjct: 307 VIQSQEVALDFIGKRGSAVGVSREKRIKYAKEILQKELLPHVGVREDCETKKAYFLGYMI 366
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL +LGR+PEDDRDHYGNKR+DL GPLLA LFRQ FR++TK+ ++ QR +D+GKE+
Sbjct: 367 HRLLLCSLGRRPEDDRDHYGNKRLDLGGPLLAQLFRQLFRKLTKDVRLYCQRCIDSGKEI 426
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
L IK+ IT+GLK+ LATGNW S A
Sbjct: 427 QLQLA-IKAKTITQGLKYSLATGNWGSQGAA 456
[18][TOP]
>UniRef100_P38420 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Arabidopsis
thaliana RepID=RPB2_ARATH
Length = 1188
Score = 196 bits (497), Expect = 9e-49
Identities = 96/152 (63%), Positives = 118/152 (77%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG TV VT+ KRI+YA+DIL KE LPHVG+GE E +K ++FGY+I
Sbjct: 315 VIQNQLVALDYIGKRGATVGVTKEKRIKYARDILQKEMLPHVGIGEHCETKKAYYFGYII 374
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+PEDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GKEV
Sbjct: 375 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEV 434
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 435 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 465
[19][TOP]
>UniRef100_Q01GR3 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri
RepID=Q01GR3_OSTTA
Length = 999
Score = 195 bits (496), Expect = 1e-48
Identities = 95/147 (64%), Positives = 118/147 (80%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQSQ+VALD+IGKRG+ V V+R KRI+YAK+IL KE LPHVGV E E +K +F GY+I
Sbjct: 153 VIQSQEVALDFIGKRGSAVGVSREKRIKYAKEILQKELLPHVGVREDCETKKAYFLGYMI 212
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL +LGR+PEDDRDHYGNKR+DL GPLLA LFRQ FR++TK+ ++ QR +D+GKE+
Sbjct: 213 HRLLLCSLGRRPEDDRDHYGNKRLDLGGPLLAQLFRQLFRKLTKDVRLYCQRCIDSGKEI 272
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSS 441
L IK+ IT+GLK+ LATGNW S
Sbjct: 273 QLQLA-IKAKTITQGLKYSLATGNWGS 298
[20][TOP]
>UniRef100_Q1L6B7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nelumbo nucifera
RepID=Q1L6B7_NELNU
Length = 865
Score = 195 bits (495), Expect = 1e-48
Identities = 96/152 (63%), Positives = 118/152 (77%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 202 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 261
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ EDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 262 HRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 321
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 322 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 352
[21][TOP]
>UniRef100_B9FA12 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9FA12_ORYSJ
Length = 1218
Score = 195 bits (495), Expect = 1e-48
Identities = 96/152 (63%), Positives = 118/152 (77%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG TV VT+ KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 344 VIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYII 403
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ EDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GKEV
Sbjct: 404 HRLLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEV 463
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW +AG
Sbjct: 464 NLQFA-IKAKTITSGLKYSLATGNWGQANQAG 494
[22][TOP]
>UniRef100_Q10G20 DNA-directed RNA polymerase n=2 Tax=Oryza sativa RepID=Q10G20_ORYSJ
Length = 1222
Score = 195 bits (495), Expect = 1e-48
Identities = 96/152 (63%), Positives = 118/152 (77%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG TV VT+ KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 348 VIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYII 407
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ EDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GKEV
Sbjct: 408 HRLLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEV 467
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW +AG
Sbjct: 468 NLQFA-IKAKTITSGLKYSLATGNWGQANQAG 498
[23][TOP]
>UniRef100_Q1L6D7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dicentra formosa
RepID=Q1L6D7_9MAGN
Length = 873
Score = 194 bits (494), Expect = 2e-48
Identities = 94/152 (61%), Positives = 119/152 (78%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+TV VT+ KRI+YA++IL KE LPHVG+GE E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTKEKRIKYAREILQKEMLPHVGIGEYCETKKAYYFGYII 269
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+PEDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDV 329
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360
[24][TOP]
>UniRef100_Q1L6E4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Chimonanthus praecox
RepID=Q1L6E4_9MAGN
Length = 906
Score = 194 bits (493), Expect = 3e-48
Identities = 93/152 (61%), Positives = 118/152 (77%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+TV VT+ KRI+YAK+IL KE LPHVG GE E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGTGEYCETKKAYYFGYII 269
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL A+GR+PEDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 270 HRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 329
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ +T GLK+ LATGNW AG
Sbjct: 330 NLQFA-IKAKTVTSGLKYSLATGNWGQANAAG 360
[25][TOP]
>UniRef100_Q1L6D4 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Embothrium coccineum RepID=Q1L6D4_EMBCO
Length = 706
Score = 194 bits (493), Expect = 3e-48
Identities = 96/152 (63%), Positives = 118/152 (77%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 269
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ EDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDV 329
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360
[26][TOP]
>UniRef100_Q1L6C3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Homalocladium
platycladum RepID=Q1L6C3_9CARY
Length = 875
Score = 194 bits (492), Expect = 3e-48
Identities = 94/152 (61%), Positives = 118/152 (77%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG TV VT+ KRI+YA++IL KE LPHVGVGE E +K ++FGY++
Sbjct: 210 VIQNQQVALDYIGKRGATVGVTKEKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIV 269
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+PEDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDQGKDV 329
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360
[27][TOP]
>UniRef100_Q1L5A7 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Spinacia oleracea RepID=Q1L5A7_SPIOL
Length = 495
Score = 194 bits (492), Expect = 3e-48
Identities = 94/152 (61%), Positives = 119/152 (78%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG TV VTR KRI+YA++IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 274 VIQNQQVALDYIGKRGATVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYII 333
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL A+GR+PEDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D+GK++
Sbjct: 334 HRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDSGKDL 393
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 394 NLSFA-IKAKTITSGLKYSLATGNWGQANAAG 424
[28][TOP]
>UniRef100_B9H2V2 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9H2V2_POPTR
Length = 690
Score = 194 bits (492), Expect = 3e-48
Identities = 96/152 (63%), Positives = 117/152 (76%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG TV VTR KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 314 VIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 373
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ EDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 374 HRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDV 433
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 434 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 464
[29][TOP]
>UniRef100_Q1L6E1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cissus tuberosa
RepID=Q1L6E1_9MAGN
Length = 951
Score = 193 bits (491), Expect = 4e-48
Identities = 94/152 (61%), Positives = 117/152 (76%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+I KE LPHVGVGE E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEIFQKEMLPHVGVGEYCETKKAYYFGYII 269
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
H+LL A GR+PEDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 270 HQLLLCAFGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 329
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360
[30][TOP]
>UniRef100_Q1L5Y8 DNA-directed RNA polymerase n=1 Tax=Antirrhinum majus
RepID=Q1L5Y8_ANTMA
Length = 1200
Score = 193 bits (491), Expect = 4e-48
Identities = 95/152 (62%), Positives = 118/152 (77%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+TV VT+ KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 323 VIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 382
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ EDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 383 HRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDV 442
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 443 NLQ-FXIKAKTITSGLKYSLATGNWGQANAAG 473
[31][TOP]
>UniRef100_Q1L5B4 DNA-directed RNA polymerase n=1 Tax=Rhododendron macrophyllum
RepID=Q1L5B4_RHOMC
Length = 1207
Score = 193 bits (490), Expect = 6e-48
Identities = 93/154 (60%), Positives = 118/154 (76%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+TV VT+ KRI+YAK+IL +E LPHVG GE E +K ++FGY+I
Sbjct: 332 VIQNQQVALDYIGKRGSTVGVTKEKRIRYAKEILQREMLPHVGTGEYCETKKAYYFGYII 391
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+PEDDRDHY NKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 392 HRLLLCALGRRPEDDRDHYANKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDV 451
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAGGK 462
+L IK+ IT GLK+ LATGNW AG +
Sbjct: 452 NLQFA-IKAKTITSGLKYSLATGNWGQANSAGSR 484
[32][TOP]
>UniRef100_Q42877 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Solanum
lycopersicum RepID=RPB2_SOLLC
Length = 1191
Score = 193 bits (490), Expect = 6e-48
Identities = 96/152 (63%), Positives = 117/152 (76%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG TV VTR KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 314 VIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 373
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ EDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 374 HRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDV 433
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 434 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 464
[33][TOP]
>UniRef100_Q1L5Y9 DNA-directed RNA polymerase n=1 Tax=Petunia x hybrida
RepID=Q1L5Y9_PETHY
Length = 1195
Score = 192 bits (489), Expect = 7e-48
Identities = 95/152 (62%), Positives = 117/152 (76%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG TV VT+ KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 318 VIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 377
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ EDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 378 HRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDV 437
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 438 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 468
[34][TOP]
>UniRef100_B9RZ91 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9RZ91_RICCO
Length = 1194
Score = 192 bits (489), Expect = 7e-48
Identities = 95/152 (62%), Positives = 117/152 (76%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG TV VT+ KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 317 VIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 376
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ EDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 377 HRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDV 436
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 437 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 467
[35][TOP]
>UniRef100_Q1L5B5 DNA-directed RNA polymerase n=1 Tax=Rhododendron macrophyllum
RepID=Q1L5B5_RHOMC
Length = 1191
Score = 192 bits (487), Expect = 1e-47
Identities = 95/152 (62%), Positives = 117/152 (76%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG TV VT+ KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 314 VIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 373
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ EDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 374 HRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDV 433
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 434 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 464
[36][TOP]
>UniRef100_Q1L5B3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Astilbe sp.
Yoshikawa s.n. RepID=Q1L5B3_9MAGN
Length = 951
Score = 191 bits (486), Expect = 2e-47
Identities = 94/152 (61%), Positives = 118/152 (77%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+TV VTR KRI+YA++IL KE LPHVG+ E E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGMAEYCETKKAYYFGYII 269
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL VALGR+ EDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 270 HRLLLVALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDV 329
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360
[37][TOP]
>UniRef100_Q1L5Z0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nicotiana sylvestris
RepID=Q1L5Z0_NICSY
Length = 1087
Score = 191 bits (485), Expect = 2e-47
Identities = 94/152 (61%), Positives = 116/152 (76%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG TV VTR KRI+YAK+IL KE LPHVG+GE E +K ++FGY+I
Sbjct: 217 VIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGIGEYCETKKAYYFGYII 276
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ EDDRDHYGNKR+DLAGPLL FR FR++T++ + +Q+ +D GK+V
Sbjct: 277 HRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGXFRMLFRKLTRDVRAYVQKXVDNGKDV 336
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 337 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 367
[38][TOP]
>UniRef100_Q1L6E5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Callistemon
subulatus RepID=Q1L6E5_9MYRT
Length = 952
Score = 191 bits (484), Expect = 3e-47
Identities = 95/152 (62%), Positives = 116/152 (76%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG TV VTR KRI+YAK+IL KE LPHVGV E E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVEEYCETKKAYYFGYII 269
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ EDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 329
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360
[39][TOP]
>UniRef100_C1E1U0 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1E1U0_9CHLO
Length = 1178
Score = 191 bits (484), Expect = 3e-47
Identities = 90/147 (61%), Positives = 118/147 (80%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQSQDVALD+IGKRG+ V VTR KRIQYA++IL KE LPHVGV E E +K +F GY++
Sbjct: 314 VIQSQDVALDFIGKRGSAVGVTRPKRIQYAREILQKELLPHVGVNEGCETKKAYFLGYIV 373
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
+RLL ALGR+ EDDRDH+GNKR+DL+GPL+A+LFRQ FR++TK+ ++ QR +D+GK++
Sbjct: 374 NRLLLCALGRKKEDDRDHFGNKRMDLSGPLIAMLFRQLFRKVTKDVRLYSQRCIDSGKDI 433
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSS 441
L +K+ IT GLK+ LATGNW +
Sbjct: 434 QLTLA-VKAKTITSGLKYSLATGNWGA 459
[40][TOP]
>UniRef100_Q1L5B7 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Camellia japonica RepID=Q1L5B7_9ERIC
Length = 417
Score = 190 bits (483), Expect = 4e-47
Identities = 94/152 (61%), Positives = 117/152 (76%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG +V VT+ KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGASVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 269
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ EDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDV 329
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360
[41][TOP]
>UniRef100_Q1L5B6 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Camellia japonica RepID=Q1L5B6_9ERIC
Length = 431
Score = 190 bits (483), Expect = 4e-47
Identities = 93/152 (61%), Positives = 116/152 (76%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL +E LPHVG GE E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGSTVGVTRDKRIRYAKEILQREMLPHVGTGEYCETKKAYYFGYII 269
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL LGR+PEDDRDHY NKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 270 HRLLLCVLGRRPEDDRDHYANKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDV 329
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 330 NLQFA-IKAKSITSGLKYSLATGNWGQANAAG 360
[42][TOP]
>UniRef100_Q1L5A9 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Liquidambar acalycina RepID=Q1L5A9_9MAGN
Length = 453
Score = 189 bits (481), Expect = 6e-47
Identities = 94/152 (61%), Positives = 116/152 (76%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG TV VT+ KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 210 VIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYII 269
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ EDDR HYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 270 HRLLLCALGRRAEDDRAHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDV 329
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 330 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 360
[43][TOP]
>UniRef100_C1ML14 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1ML14_9CHLO
Length = 1172
Score = 189 bits (480), Expect = 8e-47
Identities = 90/146 (61%), Positives = 116/146 (79%)
Frame = +1
Query: 4 IQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIH 183
IQS+ VALDYIGKRG+ V V+R KRI+YA+DIL KE LPHVGV E E RK ++ GY++H
Sbjct: 308 IQSKKVALDYIGKRGSAVGVSREKRIKYAQDILQKELLPHVGVDEECETRKAYYLGYIVH 367
Query: 184 RLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVS 363
RLL ALGR+ EDDRDH+GNKR+DLAGPL+A+LFRQ FR++TK+ ++ QR +D+GKE+
Sbjct: 368 RLLLCALGRRNEDDRDHFGNKRMDLAGPLIAILFRQLFRKLTKDVRLYCQRCVDSGKEIQ 427
Query: 364 LHGGHIKSDVITKGLKFPLATGNWSS 441
L +K+ IT GLK+ LATGNW +
Sbjct: 428 LTLA-VKAKTITSGLKYSLATGNWGA 452
[44][TOP]
>UniRef100_Q1L5Z4 DNA-directed RNA polymerase n=1 Tax=Nicotiana sylvestris
RepID=Q1L5Z4_NICSY
Length = 1203
Score = 188 bits (477), Expect = 2e-46
Identities = 90/152 (59%), Positives = 116/152 (76%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+TV TR +RI+YAK+IL +E LPHVG E E +K ++FGY+I
Sbjct: 328 VIQNQQVALDYIGKRGSTVGFTRERRIKYAKEILQREMLPHVGTREYCETKKAYYFGYII 387
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL LGR+PEDDRDHYG+KR+DLAGPLL LFR FR++T++ + +Q+ +D+GK+V
Sbjct: 388 HRLLLCVLGRRPEDDRDHYGBKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDSGKDV 447
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 448 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 478
[45][TOP]
>UniRef100_A9SJE5 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9SJE5_PHYPA
Length = 1185
Score = 188 bits (477), Expect = 2e-46
Identities = 95/152 (62%), Positives = 116/152 (76%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+TV VTR KRI+YAK+IL KE LPHVGVGE E +K +FFGY+I
Sbjct: 309 VIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYFFGYII 368
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL A+G EDDRDHYGNKR+DLAGPLL LFR FR++TK+ + +Q+ +D GKE+
Sbjct: 369 HRLLLCAIG-GAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTKDVRGYLQKCVDNGKEI 427
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L +K+ IT GLK+ LATGNW AG
Sbjct: 428 NL-AYAVKAKTITSGLKYSLATGNWGQANTAG 458
[46][TOP]
>UniRef100_Q1L5Z2 DNA-directed RNA polymerase n=1 Tax=Petunia x hybrida
RepID=Q1L5Z2_PETHY
Length = 1203
Score = 187 bits (475), Expect = 3e-46
Identities = 90/152 (59%), Positives = 116/152 (76%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+TV +R +RI+YAK+IL +E LPHVG E E +K ++FGY+I
Sbjct: 328 VIQNQQVALDYIGKRGSTVGFSRERRIKYAKEILQREMLPHVGTREYCETKKAYYFGYII 387
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL LGR+PEDDRDHYGNKR+DLAGPLL LFR FR++T++ + +Q+ +D+GK+V
Sbjct: 388 HRLLLCVLGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDSGKDV 447
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 448 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 478
[47][TOP]
>UniRef100_Q1L5Z1 DNA-directed RNA polymerase n=1 Tax=Solanum lycopersicum
RepID=Q1L5Z1_SOLLC
Length = 1205
Score = 187 bits (475), Expect = 3e-46
Identities = 91/152 (59%), Positives = 114/152 (75%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+TV TR KRI+YAK+IL +E LPHVG E E +K ++FGY+I
Sbjct: 333 VIQNQQVALDYIGKRGSTVGFTREKRIKYAKEILQREMLPHVGTREYCETKKAYYFGYII 392
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL LGR+PEDDRDHY NKR+DLAGPLL LFR FR++T++ + +Q+ +D GK+V
Sbjct: 393 HRLLLCVLGRRPEDDRDHYANKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDGGKDV 452
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW AG
Sbjct: 453 NLQFA-IKAKTITSGLKYSLATGNWGQANAAG 483
[48][TOP]
>UniRef100_Q1L5Z3 DNA-directed RNA polymerase n=1 Tax=Antirrhinum majus
RepID=Q1L5Z3_ANTMA
Length = 1198
Score = 186 bits (472), Expect = 7e-46
Identities = 90/152 (59%), Positives = 117/152 (76%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG+T+ VTR KRI+YA++IL +E LPHVG E E +K ++FGY+I
Sbjct: 323 VIQNQQVALDYIGKRGSTIGVTRDKRIKYAREILQREMLPHVGTEEYCETKKAYYFGYII 382
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
+RLL ALGR+PEDDRDHY NKR+DLAGPLLA LFR FR++T++ + +Q+ +D GK+V
Sbjct: 383 NRLLLCALGRRPEDDRDHYANKRLDLAGPLLAGLFRMLFRKLTRDVRSYVQKCVDNGKDV 442
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ +ATGNW AG
Sbjct: 443 NLQFA-IKAKTITSGLKYSIATGNWGQANAAG 473
[49][TOP]
>UniRef100_A1YIC9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Furculomyces
boomerangus RepID=A1YIC9_9FUNG
Length = 906
Score = 180 bits (457), Expect = 4e-44
Identities = 88/151 (58%), Positives = 113/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ +DVALD+IGKRG V V++ KRI+Y +IL KEFLPHVG NE RK FFFGY++
Sbjct: 117 VIQDKDVALDFIGKRGTAVGVSKDKRIKYGAEILQKEFLPHVGTQAHNETRKSFFFGYMV 176
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ +DDRDHYG KR+DLAGPLLA+LFR FR++TK+ +Q+ +D+ +E
Sbjct: 177 HRLLLCALERREQDDRDHYGKKRMDLAGPLLAMLFRNLFRKVTKDMTRYLQKCIDSKREF 236
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IKS+ IT GLK+ LATGNW +K+
Sbjct: 237 NLTMA-IKSNTITAGLKYSLATGNWGDQKKS 266
[50][TOP]
>UniRef100_Q1L5X1 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=Q1L5X1_CHLRE
Length = 1607
Score = 179 bits (454), Expect = 8e-44
Identities = 85/151 (56%), Positives = 112/151 (74%)
Frame = +1
Query: 4 IQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIH 183
+Q+Q+ AL+Y+GKRG ++A RIQYA+++L KE LPH+G E E RKG+F GY++H
Sbjct: 305 VQTQEEALNYLGKRGTVTGASKADRIQYARNLLIKELLPHLGTEEFMETRKGYFVGYMVH 364
Query: 184 RLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVS 363
RL+ VALGR+PEDDRDHY NKR+DL GPL+A LFR FR++ KE +M QR +DAGKE++
Sbjct: 365 RLMLVALGRRPEDDRDHYANKRLDLGGPLMAGLFRLLFRKLCKELRMQAQRMVDAGKEIN 424
Query: 364 LHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+ I VIT+GLK+ LATGNW K G
Sbjct: 425 VISA-INDKVITRGLKYSLATGNWGEQGKQG 454
[51][TOP]
>UniRef100_A1YIC8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Capniomyces
stellatus RepID=A1YIC8_9FUNG
Length = 924
Score = 179 bits (454), Expect = 8e-44
Identities = 86/151 (56%), Positives = 115/151 (76%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++V+LD+IGKRG TV V++ KR++YA++IL KEFLPHVG NE RK +FFGY+I
Sbjct: 124 VIQDKEVSLDFIGKRGTTVGVSKEKRVKYAREILQKEFLPHVGTQAHNETRKTYFFGYMI 183
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL L R+ +DDRDHYG KR+DLAGPLLA+LFR FR++TK+ +Q+ +D+ +E
Sbjct: 184 HRLLLCGLERREQDDRDHYGKKRMDLAGPLLAMLFRNLFRKVTKDMTRYLQKCIDSKREF 243
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +KS+ IT GLK+ LATGNW +KA
Sbjct: 244 NLTMA-MKSNTITAGLKYSLATGNWGDQKKA 273
[52][TOP]
>UniRef100_C5WR62 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5WR62_SORBI
Length = 1218
Score = 178 bits (451), Expect = 2e-43
Identities = 94/152 (61%), Positives = 108/152 (71%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ+Q VALDYIGKRG TV VTR KRI+YAK+IL KE LPHVGVGE E +K ++FGY+I
Sbjct: 359 VIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYII 418
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ EDDRDHYGNKR+DLAGPLL LFR C +D GKEV
Sbjct: 419 HRLLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMC---------------VDNGKEV 463
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L IK+ IT GLK+ LATGNW +AG
Sbjct: 464 NLQFA-IKAKTITSGLKYSLATGNWGQANQAG 494
[53][TOP]
>UniRef100_A1YIC7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Smittium culisetae
RepID=A1YIC7_SMICU
Length = 899
Score = 177 bits (449), Expect = 3e-43
Identities = 84/151 (55%), Positives = 114/151 (75%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++V+LD+IGKRG TV V R KRI+YA++IL KEFLPHVG NE RK +F GY++
Sbjct: 102 VIQDREVSLDFIGKRGTTVGVNREKRIKYAREILQKEFLPHVGTQPHNETRKTYFLGYMV 161
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL+ L R+ +DDRDHYG KR+DLAGPLLA+LFR F++MT++ +Q+ +++ +E
Sbjct: 162 HRLLQCVLERRDQDDRDHYGRKRLDLAGPLLAMLFRNLFKKMTRDMTRYLQKCIESRREF 221
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +KS+ IT GLK+ LATGNW +KA
Sbjct: 222 NLSMA-LKSNTITAGLKYSLATGNWGDQKKA 251
[54][TOP]
>UniRef100_A1YID1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Basidiobolus ranarum
RepID=A1YID1_9FUNG
Length = 883
Score = 177 bits (448), Expect = 4e-43
Identities = 86/151 (56%), Positives = 110/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q VALDYIGKRG TV + + KRI+YA +IL KEFLPHV E +K +FFGY++
Sbjct: 115 VIQEQHVALDYIGKRGTTVGINKDKRIKYATEILQKEFLPHVATEAHTETKKAYFFGYMV 174
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDHYG KR+DLAGPLLA+LFR FR++TK+ +Q+ +D+ +E
Sbjct: 175 HRLLLAALERRDLDDRDHYGKKRMDLAGPLLAMLFRMLFRKLTKDVGRYLQKCIDSNREF 234
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +KS+ IT GLK+ LATGNW +KA
Sbjct: 235 NLTLA-VKSNTITNGLKYSLATGNWGDQKKA 264
[55][TOP]
>UniRef100_Q9UV80 DNA-directed RNA polymerase (Fragment) n=1 Tax=Sclerotinia
sclerotiorum RepID=Q9UV80_SCLSC
Length = 938
Score = 176 bits (447), Expect = 5e-43
Identities = 85/151 (56%), Positives = 112/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IGKRGN ++TR KRI+YA+DI+ KE LPH+ E +E RK FF GY++
Sbjct: 120 VIQDREVALDFIGKRGNGTSLTRDKRIKYARDIMQKELLPHISQKEGSETRKAFFLGYMV 179
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
H+LL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR FRR+T + +QR ++ +E
Sbjct: 180 HKLLQCALGRRETDDRDHFGKKRLDLAGPLLAKLFRNLFRRLTTDVYRYLQRCVENNREF 239
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L G +KS IT GLK+ LATGNW +KA
Sbjct: 240 NLTLG-VKSTTITNGLKYSLATGNWGDQKKA 269
[56][TOP]
>UniRef100_A7E6G0 DNA-directed RNA polymerase n=1 Tax=Sclerotinia sclerotiorum 1980
UF-70 RepID=A7E6G0_SCLS1
Length = 1267
Score = 176 bits (447), Expect = 5e-43
Identities = 85/151 (56%), Positives = 112/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IGKRGN ++TR KRI+YA+DI+ KE LPH+ E +E RK FF GY++
Sbjct: 346 VIQDREVALDFIGKRGNGTSLTRDKRIKYARDIMQKELLPHISQKEGSETRKAFFLGYMV 405
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
H+LL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR FRR+T + +QR ++ +E
Sbjct: 406 HKLLQCALGRRETDDRDHFGKKRLDLAGPLLAKLFRNLFRRLTTDVYRYLQRCVENNREF 465
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L G +KS IT GLK+ LATGNW +KA
Sbjct: 466 NLTLG-VKSTTITNGLKYSLATGNWGDQKKA 495
[57][TOP]
>UniRef100_A6S7C1 DNA-directed RNA polymerase n=2 Tax=Botryotinia fuckeliana
RepID=A6S7C1_BOTFB
Length = 1207
Score = 176 bits (447), Expect = 5e-43
Identities = 85/151 (56%), Positives = 112/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IGKRGN ++TR KRI+YA+DI+ KE LPH+ E +E RK FF GY++
Sbjct: 346 VIQDREVALDFIGKRGNGTSLTRDKRIKYARDIMQKELLPHISQKEGSETRKAFFLGYMV 405
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
H+LL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR FRR+T + +QR ++ +E
Sbjct: 406 HKLLQCALGRRETDDRDHFGKKRLDLAGPLLAKLFRNLFRRLTTDVYRYLQRCVENNREF 465
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L G +KS IT GLK+ LATGNW +KA
Sbjct: 466 NLTLG-VKSTTITNGLKYSLATGNWGDQKKA 495
[58][TOP]
>UniRef100_Q54J75 DNA-directed RNA polymerase II subunit rpb2 n=1 Tax=Dictyostelium
discoideum RepID=RPB2_DICDI
Length = 1170
Score = 176 bits (447), Expect = 5e-43
Identities = 85/154 (55%), Positives = 114/154 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQSQ+VALDY+GKRG+T+ TR +RI++A+++L KE LPHV V E E +K F+FGY+
Sbjct: 309 VIQSQEVALDYLGKRGSTMG-TREQRIKFAREVLQKEMLPHVSVAEFYETKKAFYFGYIT 367
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL +L R+P DDRDH+ NKR+DLAGPLL LFRQ F+++TK+ ++ +QR +D KE
Sbjct: 368 HRLLLASLERRPLDDRDHFANKRLDLAGPLLGTLFRQLFKKLTKDVRLYLQRCIDKDKEF 427
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAGGK 462
+ +KS IT GLK+ LATGNW S + G K
Sbjct: 428 -IASSAVKSKTITSGLKYSLATGNWGSSKSGGTK 460
[59][TOP]
>UniRef100_Q6RYG4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Thamnolia
vermicularis RepID=Q6RYG4_9LECA
Length = 893
Score = 176 bits (446), Expect = 7e-43
Identities = 82/151 (54%), Positives = 114/151 (75%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IGKRGN+ +TR KRI+YA+DI+ KE LPH+ E +E RK FF GY++
Sbjct: 110 VIQDREVALDFIGKRGNSQGITRDKRIKYARDIMQKELLPHISQVEGSETRKAFFLGYMV 169
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HR+L+VALGR+ DDRDH+G KR+DLAGPL+A LFR F ++TK+ +Q+ +++ +E
Sbjct: 170 HRMLQVALGRRDPDDRDHFGKKRLDLAGPLMAGLFRMLFNKLTKDVYKYLQKCVESNREF 229
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L G +KS +T GLK+ LATGNW +KA
Sbjct: 230 NLTLG-VKSTTLTNGLKYSLATGNWGDQKKA 259
[60][TOP]
>UniRef100_A7XIF0 DNA-directed RNA polymerase n=1 Tax=Psilopezia deligata
RepID=A7XIF0_9PEZI
Length = 801
Score = 176 bits (446), Expect = 7e-43
Identities = 84/151 (55%), Positives = 114/151 (75%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ +++ALDYIGKRGN+ + KRI+YA+DIL KE LPH+ E NE RK FF GY++
Sbjct: 90 VIQDREIALDYIGKRGNSQGSNKEKRIRYARDILQKELLPHISQQEGNETRKAFFLGYMV 149
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL+ AL R+ DDRDH+G KR+DLAGPLLA LFR ++++TKE +++ ++ GKE
Sbjct: 150 HRLLQCALERREVDDRDHFGKKRLDLAGPLLAQLFRTLWKQLTKEVYKYLEKCVEGGKEF 209
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L+ +KS+ IT GLK+ LATGNW+S +KA
Sbjct: 210 NLNLA-VKSNTITSGLKYSLATGNWASQKKA 239
[61][TOP]
>UniRef100_Q6RYG6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Sphaerophorus
globosus RepID=Q6RYG6_9LECA
Length = 903
Score = 175 bits (444), Expect = 1e-42
Identities = 85/151 (56%), Positives = 110/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IGKRGN+ VTR KRI+YA+DI+ KE LPH+ E E RK FF GY++
Sbjct: 119 VIQDREVALDFIGKRGNSQGVTRDKRIKYARDIMQKELLPHISQSEGTETRKAFFLGYMV 178
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F ++TK+ +QR ++ KE
Sbjct: 179 HRLLQCALGRREVDDRDHFGKKRLDLAGPLLAGLFRMLFNKLTKDVYKYLQRCVENNKEF 238
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +KS +T GLK+ LATGNW +KA
Sbjct: 239 NLTLA-VKSTTLTNGLKYSLATGNWGDQKKA 268
[62][TOP]
>UniRef100_C4Q1D7 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni
RepID=C4Q1D7_SCHMA
Length = 1304
Score = 175 bits (443), Expect = 2e-42
Identities = 88/151 (58%), Positives = 110/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q VAL++IG RG VT+ KRI+YAK+IL KE LPHVGV + E RK +F GY++
Sbjct: 436 VIQEQKVALNFIGSRGARPGVTKEKRIKYAKEILQKETLPHVGVSDFCETRKAYFLGYMV 495
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDHYGNKR+DLAGPLLA LFR FR +TKE ++ Q+ +D GK+
Sbjct: 496 HRLLLAALKRRDVDDRDHYGNKRLDLAGPLLAFLFRGLFRNLTKEIRLYAQKFIDKGKDF 555
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L I+S +IT GLK+ LATGNW +KA
Sbjct: 556 NLELA-IRSQIITDGLKYSLATGNWGDQKKA 585
[63][TOP]
>UniRef100_UPI0001865901 hypothetical protein BRAFLDRAFT_125505 n=1 Tax=Branchiostoma
floridae RepID=UPI0001865901
Length = 1176
Score = 174 bits (441), Expect = 3e-42
Identities = 85/151 (56%), Positives = 112/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YA++IL KE LPHVG+ + E +K +F GY++
Sbjct: 312 VIQEQNVALNFIGARGAKPGVTKDKRIKYAREILQKEMLPHVGISDYCETKKAYFLGYIV 371
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ +TKE ++ Q+ +D GK+
Sbjct: 372 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAYLFRGLFKNLTKEVRIYAQKFIDRGKDF 431
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +IT GLK+ LATGNW +KA
Sbjct: 432 NLELA-IKTRIITDGLKYSLATGNWGDQKKA 461
[64][TOP]
>UniRef100_UPI000180B7B7 PREDICTED: similar to POLR2B protein n=1 Tax=Ciona intestinalis
RepID=UPI000180B7B7
Length = 1173
Score = 174 bits (441), Expect = 3e-42
Identities = 85/151 (56%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YA++IL KE LPHVG+ + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAREILQKEMLPHVGISDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR FR + KE ++ Q+ +D GK+
Sbjct: 370 HRLLSAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFRNLMKEVRLYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +IT GLK+ LATGNW +KA
Sbjct: 430 NLELA-IKTRIITDGLKYSLATGNWGDQKKA 459
[65][TOP]
>UniRef100_Q27670 DNA-directed RNA polymerase (Fragment) n=1 Tax=Helobdella stagnalis
RepID=Q27670_9ANNE
Length = 859
Score = 174 bits (441), Expect = 3e-42
Identities = 86/150 (57%), Positives = 110/150 (73%)
Frame = +1
Query: 4 IQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIH 183
+Q Q VAL++IG RG+ VTR KRI+YAK+IL KE LPHVG+ + E RK +F GY++H
Sbjct: 118 VQDQPVALNFIGGRGSRPGVTREKRIKYAKEILQKEMLPHVGISDFCETRKAYFLGYMVH 177
Query: 184 RLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVS 363
RLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR FR ++KE ++ Q+ +D GK+ +
Sbjct: 178 RLLLAALGRREVDDRDHYGNKRLDLAGPLLAYLFRGLFRNLSKEIRLYAQKFIDRGKDFN 237
Query: 364 LHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
L IK+ IT GLK+ LATGNW +KA
Sbjct: 238 LELA-IKTRTITDGLKYSLATGNWGDQKKA 266
[66][TOP]
>UniRef100_C3Y5U9 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
RepID=C3Y5U9_BRAFL
Length = 1104
Score = 174 bits (441), Expect = 3e-42
Identities = 85/151 (56%), Positives = 112/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YA++IL KE LPHVG+ + E +K +F GY++
Sbjct: 312 VIQEQNVALNFIGARGAKPGVTKDKRIKYAREILQKEMLPHVGISDYCETKKAYFLGYIV 371
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ +TKE ++ Q+ +D GK+
Sbjct: 372 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAYLFRGLFKNLTKEVRIYAQKFIDRGKDF 431
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +IT GLK+ LATGNW +KA
Sbjct: 432 NLELA-IKTRIITDGLKYSLATGNWGDQKKA 461
[67][TOP]
>UniRef100_Q27548 DNA-directed RNA polymerase (Fragment) n=1 Tax=Crassostrea gigas
RepID=Q27548_CRAGI
Length = 859
Score = 174 bits (440), Expect = 4e-42
Identities = 85/151 (56%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YA++IL KE LPHVGV + E +K +F GY++
Sbjct: 117 VIQEQNVALNFIGSRGARPGVTKEKRIKYAREILQKEMLPHVGVSDFCETKKAYFLGYMV 176
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL A+GR+ DDRDHYGNKR+DLAGPLLA LFR FR + KE ++ Q+ +D GK+
Sbjct: 177 HRLLLAAIGRREVDDRDHYGNKRLDLAGPLLAFLFRGLFRNLMKEVRLYAQKFIDRGKDF 236
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +IT GLK+ LATGNW +KA
Sbjct: 237 NLELA-IKTRIITDGLKYSLATGNWGDQKKA 266
[68][TOP]
>UniRef100_Q7QAK7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7QAK7_ANOGA
Length = 1175
Score = 173 bits (439), Expect = 5e-42
Identities = 85/151 (56%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
V+Q Q+VAL++IG RG VT+ KRI+YAK+IL KE LPHVGV + E +K +F GY++
Sbjct: 310 VVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE +M Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +IT GL++ LATGNW +KA
Sbjct: 430 NLELA-IKTKIITDGLRYSLATGNWGDQKKA 459
[69][TOP]
>UniRef100_B0WKE9 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
RepID=B0WKE9_CULQU
Length = 1176
Score = 173 bits (439), Expect = 5e-42
Identities = 85/151 (56%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
V+Q Q+VAL++IG RG VT+ KRI+YAK+IL KE LPHVGV + E +K +F GY++
Sbjct: 311 VVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 370
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE +M Q+ +D GK+
Sbjct: 371 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLLKEVRMYAQKFIDRGKDF 430
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +IT GL++ LATGNW +KA
Sbjct: 431 NLELA-IKTKIITDGLRYSLATGNWGDQKKA 460
[70][TOP]
>UniRef100_Q2I5S5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phycomyces
blakesleeanus RepID=Q2I5S5_PHYBL
Length = 801
Score = 173 bits (439), Expect = 5e-42
Identities = 85/151 (56%), Positives = 109/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ QDVALD+IGKRG TV TR +R +YA +IL KE LPHVG E RK +FFGY+I
Sbjct: 119 VIQDQDVALDFIGKRGTTVGATRERRTKYATEILQKELLPHVGTAYKTETRKSYFFGYMI 178
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDHYG KR+DLAGPL+A LFR F+++TK+ +Q+ +++ +E
Sbjct: 179 HRLLLAALERRELDDRDHYGKKRMDLAGPLMAGLFRLLFKKLTKDVAKYLQKCIESSREF 238
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +KS+ IT GLK+ LATGNW +KA
Sbjct: 239 NLTLA-VKSNTITNGLKYSLATGNWGDQKKA 268
[71][TOP]
>UniRef100_UPI000186D6F3 DNA-directed RNA polymerase II 135 kDa polypeptide, putative n=1
Tax=Pediculus humanus corporis RepID=UPI000186D6F3
Length = 1175
Score = 173 bits (438), Expect = 6e-42
Identities = 85/151 (56%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ +RI+YAK+IL KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGARGARPGVTKERRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE +M Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMFAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +IT GL++ LATGNW +KA
Sbjct: 430 NLELA-IKTKIITDGLRYSLATGNWGDQKKA 459
[72][TOP]
>UniRef100_B4R0H5 DNA-directed RNA polymerase n=1 Tax=Drosophila simulans
RepID=B4R0H5_DROSI
Length = 1176
Score = 173 bits (438), Expect = 6e-42
Identities = 84/151 (55%), Positives = 112/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
V+Q Q+VAL++IG RG VT+ KRI+YAK+IL KE LPHVGV + E +K +F GY++
Sbjct: 311 VVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 370
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL +LGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE +M Q+ +D GK+
Sbjct: 371 HRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQKFIDRGKDF 430
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+++IT GL++ LATGNW +KA
Sbjct: 431 NLELA-IKTNIITDGLRYSLATGNWGDQKKA 460
[73][TOP]
>UniRef100_B4PTC0 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4PTC0_DROYA
Length = 1176
Score = 173 bits (438), Expect = 6e-42
Identities = 84/151 (55%), Positives = 112/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
V+Q Q+VAL++IG RG VT+ KRI+YAK+IL KE LPHVGV + E +K +F GY++
Sbjct: 311 VVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 370
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL +LGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE +M Q+ +D GK+
Sbjct: 371 HRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQKFIDRGKDF 430
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+++IT GL++ LATGNW +KA
Sbjct: 431 NLELA-IKTNIITDGLRYSLATGNWGDQKKA 460
[74][TOP]
>UniRef100_B4N9I3 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4N9I3_DROWI
Length = 1176
Score = 173 bits (438), Expect = 6e-42
Identities = 84/151 (55%), Positives = 112/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
V+Q Q+VAL++IG RG VT+ KRI+YAK+IL KE LPHVGV + E +K +F GY++
Sbjct: 311 VVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 370
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL +LGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE +M Q+ +D GK+
Sbjct: 371 HRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQKFIDRGKDF 430
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+++IT GL++ LATGNW +KA
Sbjct: 431 NLELA-IKTNIITDGLRYSLATGNWGDQKKA 460
[75][TOP]
>UniRef100_B4M040 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
RepID=B4M040_DROVI
Length = 1176
Score = 173 bits (438), Expect = 6e-42
Identities = 84/151 (55%), Positives = 112/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
V+Q Q+VAL++IG RG VT+ KRI+YAK+IL KE LPHVGV + E +K +F GY++
Sbjct: 311 VVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 370
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL +LGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE +M Q+ +D GK+
Sbjct: 371 HRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQKFIDRGKDF 430
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+++IT GL++ LATGNW +KA
Sbjct: 431 NLELA-IKTNIITDGLRYSLATGNWGDQKKA 460
[76][TOP]
>UniRef100_B4KDW5 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4KDW5_DROMO
Length = 1176
Score = 173 bits (438), Expect = 6e-42
Identities = 84/151 (55%), Positives = 112/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
V+Q Q+VAL++IG RG VT+ KRI+YAK+IL KE LPHVGV + E +K +F GY++
Sbjct: 311 VVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 370
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL +LGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE +M Q+ +D GK+
Sbjct: 371 HRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQKFIDRGKDF 430
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+++IT GL++ LATGNW +KA
Sbjct: 431 NLELA-IKTNIITDGLRYSLATGNWGDQKKA 460
[77][TOP]
>UniRef100_B4K015 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4K015_DROGR
Length = 1175
Score = 173 bits (438), Expect = 6e-42
Identities = 84/151 (55%), Positives = 112/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
V+Q Q+VAL++IG RG VT+ KRI+YAK+IL KE LPHVGV + E +K +F GY++
Sbjct: 310 VVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL +LGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE +M Q+ +D GK+
Sbjct: 370 HRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+++IT GL++ LATGNW +KA
Sbjct: 430 NLELA-IKTNIITDGLRYSLATGNWGDQKKA 459
[78][TOP]
>UniRef100_Q298X6 DNA-directed RNA polymerase n=2 Tax=pseudoobscura subgroup
RepID=Q298X6_DROPS
Length = 1176
Score = 173 bits (438), Expect = 6e-42
Identities = 84/151 (55%), Positives = 112/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
V+Q Q+VAL++IG RG VT+ KRI+YAK+IL KE LPHVGV + E +K +F GY++
Sbjct: 311 VVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 370
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL +LGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE +M Q+ +D GK+
Sbjct: 371 HRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQKFIDRGKDF 430
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+++IT GL++ LATGNW +KA
Sbjct: 431 NLELA-IKTNIITDGLRYSLATGNWGDQKKA 460
[79][TOP]
>UniRef100_B3P0M0 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3P0M0_DROER
Length = 1176
Score = 173 bits (438), Expect = 6e-42
Identities = 84/151 (55%), Positives = 112/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
V+Q Q+VAL++IG RG VT+ KRI+YAK+IL KE LPHVGV + E +K +F GY++
Sbjct: 311 VVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 370
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL +LGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE +M Q+ +D GK+
Sbjct: 371 HRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQKFIDRGKDF 430
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+++IT GL++ LATGNW +KA
Sbjct: 431 NLELA-IKTNIITDGLRYSLATGNWGDQKKA 460
[80][TOP]
>UniRef100_B3LYR3 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3LYR3_DROAN
Length = 1176
Score = 173 bits (438), Expect = 6e-42
Identities = 84/151 (55%), Positives = 112/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
V+Q Q+VAL++IG RG VT+ KRI+YAK+IL KE LPHVGV + E +K +F GY++
Sbjct: 311 VVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 370
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL +LGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE +M Q+ +D GK+
Sbjct: 371 HRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQKFIDRGKDF 430
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+++IT GL++ LATGNW +KA
Sbjct: 431 NLELA-IKTNIITDGLRYSLATGNWGDQKKA 460
[81][TOP]
>UniRef100_Q6RYH6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dibaeis baeomyces
RepID=Q6RYH6_9LECA
Length = 893
Score = 173 bits (438), Expect = 6e-42
Identities = 80/151 (52%), Positives = 113/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IGKRGN+ +TR KRI+YA+DI+ KE LPH+ E +E RK FF GY++
Sbjct: 110 VIQDREVALDFIGKRGNSQGITRDKRIKYARDIMQKELLPHISQVEGSETRKAFFLGYMV 169
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HR+L+V LGR+ DDRDH+G KR+DLAGPL+A LFR F ++TK+ +Q+ +++ +E
Sbjct: 170 HRMLQVTLGRRDPDDRDHFGKKRLDLAGPLMAGLFRTLFNKLTKDVYKYLQKCVESNREF 229
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L G +KS +T GL++ LATGNW +KA
Sbjct: 230 NLTLG-VKSTTLTNGLRYSLATGNWGEQKKA 259
[82][TOP]
>UniRef100_P08266 DNA-directed RNA polymerase II subunit RPB2 n=2 Tax=melanogaster
subgroup RepID=RPB2_DROME
Length = 1176
Score = 173 bits (438), Expect = 6e-42
Identities = 84/151 (55%), Positives = 112/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
V+Q Q+VAL++IG RG VT+ KRI+YAK+IL KE LPHVGV + E +K +F GY++
Sbjct: 311 VVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 370
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL +LGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE +M Q+ +D GK+
Sbjct: 371 HRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQKFIDRGKDF 430
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+++IT GL++ LATGNW +KA
Sbjct: 431 NLELA-IKTNIITDGLRYSLATGNWGDQKKA 460
[83][TOP]
>UniRef100_A7SHD8 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
RepID=A7SHD8_NEMVE
Length = 1182
Score = 172 bits (437), Expect = 8e-42
Identities = 85/151 (56%), Positives = 110/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ +RI+YAK+IL KE LPHVGV + E +K +F GY++
Sbjct: 314 VIQEQNVALNFIGSRGARPGVTKERRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMV 373
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR FR + KE +M Q+ +D GK+
Sbjct: 374 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFRNLMKEVRMYAQKFIDRGKDF 433
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
++ +K VIT GL++ LATGNW +KA
Sbjct: 434 NIELA-LKPKVITDGLRYSLATGNWGDQKKA 463
[84][TOP]
>UniRef100_Q02061 DNA-directed RNA polymerase II subunit RPB2 n=1
Tax=Schizosaccharomyces pombe RepID=RPB2_SCHPO
Length = 1210
Score = 172 bits (437), Expect = 8e-42
Identities = 83/151 (54%), Positives = 110/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ +D+ALDYIGKRG+T VTR KR++YA DIL KE LPH+ E E RK FF GY+I
Sbjct: 309 VIQDKDIALDYIGKRGSTTGVTREKRLRYAHDILQKELLPHITTMEGFETRKAFFLGYMI 368
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HR+L AL R+ DDRDH+G KR+DLAGPLLA LFR FR+MT++ MQ+ ++ +E
Sbjct: 369 HRMLLCALERREPDDRDHFGKKRLDLAGPLLASLFRMLFRKMTRDVYKYMQKCVETNREF 428
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +KS++IT GL++ LATGNW +++
Sbjct: 429 NLTLA-VKSNIITNGLRYSLATGNWGDQKRS 458
[85][TOP]
>UniRef100_Q9UV82 DNA-directed RNA polymerase (Fragment) n=1 Tax=Microglossum viride
RepID=Q9UV82_9PEZI
Length = 938
Score = 172 bits (436), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALDYIGKRGN + +TR KRI+YA+DI+ KE LPH+ E +E RK FF GY++
Sbjct: 120 VIQDREVALDYIGKRGNAMGLTRDKRIKYARDIMQKELLPHISQKEGSETRKAFFLGYMV 179
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
H+LL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F+++T++ QR ++ KE
Sbjct: 180 HKLLQCALGRRETDDRDHFGKKRLDLAGPLLAKLFRNLFKKLTQDLFKYTQRCVENRKEF 239
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ G IKS +T GLK+ LATGNW +KA
Sbjct: 240 NPALG-IKSTTLTAGLKYSLATGNWGDQKKA 269
[86][TOP]
>UniRef100_Q9UV81 DNA-directed RNA polymerase (Fragment) n=1 Tax=Leotia viscosa
RepID=Q9UV81_9HELO
Length = 938
Score = 172 bits (436), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALDYIGKRGN + +TR KRI+YA+DI+ KE LPH+ E +E RK FF GY++
Sbjct: 120 VIQDREVALDYIGKRGNAMGLTRDKRIKYARDIMQKELLPHISQKEGSETRKAFFLGYMV 179
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
H+LL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F+++T++ QR ++ KE
Sbjct: 180 HKLLQCALGRRETDDRDHFGKKRLDLAGPLLAKLFRNLFKKLTQDLFKYTQRCVENRKEF 239
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ G IKS +T GLK+ LATGNW +KA
Sbjct: 240 NPALG-IKSTTLTAGLKYSLATGNWGDQKKA 269
[87][TOP]
>UniRef100_UPI000194C2A3 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide B, 140kDa
n=1 Tax=Taeniopygia guttata RepID=UPI000194C2A3
Length = 1174
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459
[88][TOP]
>UniRef100_UPI0001795E58 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB2
(RNA polymerase II subunit B2) (DNA-directed RNA
polymerase II subunit B) (RNA polymerase II subunit 2)
(DNA-directed RNA polymerase II 140 kDa polypeptide) n=1
Tax=Equus caballus RepID=UPI0001795E58
Length = 1174
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 430 NLQLA-IKTRIISDGLKYSLATGNWGDQKKA 459
[89][TOP]
>UniRef100_UPI000155BCC7 PREDICTED: similar to RNA polymerase II 140 kDa subunit, partial
n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BCC7
Length = 951
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459
[90][TOP]
>UniRef100_UPI0000F2D75F PREDICTED: similar to RNA polymerase II 140 kDa subunit n=1
Tax=Monodelphis domestica RepID=UPI0000F2D75F
Length = 1174
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459
[91][TOP]
>UniRef100_UPI0000E20419 PREDICTED: DNA directed RNA polymerase II polypeptide B isoform 1
n=1 Tax=Pan troglodytes RepID=UPI0000E20419
Length = 1099
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 235 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 294
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 295 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 354
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 355 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 384
[92][TOP]
>UniRef100_P30876 DNA-directed RNA polymerase II subunit RPB2 n=2 Tax=Catarrhini
RepID=RPB2_HUMAN
Length = 1174
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459
[93][TOP]
>UniRef100_UPI00005A2A5D PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
17 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5D
Length = 1099
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 235 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 294
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 295 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 354
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 355 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 384
[94][TOP]
>UniRef100_UPI00005A2A5C PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
16 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5C
Length = 1173
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459
[95][TOP]
>UniRef100_UPI00005A2A5B PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
15 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5B
Length = 1179
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459
[96][TOP]
>UniRef100_UPI00005A2A5A PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
14 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5A
Length = 1175
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459
[97][TOP]
>UniRef100_UPI00005A2A59 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
13 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A59
Length = 1180
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459
[98][TOP]
>UniRef100_UPI00005A2A58 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
12 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A58
Length = 1174
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 311 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 370
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 371 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 430
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 431 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 460
[99][TOP]
>UniRef100_UPI00005A2A57 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
11 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A57
Length = 1180
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459
[100][TOP]
>UniRef100_UPI00005A2A56 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
10 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A56
Length = 1166
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 305 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 364
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 365 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 424
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 425 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 454
[101][TOP]
>UniRef100_UPI00005A2A55 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
9 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A55
Length = 1182
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 306 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 365
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 366 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 425
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 426 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 455
[102][TOP]
>UniRef100_UPI00005A2A54 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
8 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A54
Length = 1173
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459
[103][TOP]
>UniRef100_UPI00005A2A52 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
6 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A52
Length = 1162
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459
[104][TOP]
>UniRef100_UPI00005A2A51 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
5 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A51
Length = 932
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459
[105][TOP]
>UniRef100_UPI00006A01AA DNA-directed RNA polymerase II subunit RPB2 (EC 2.7.7.6) (RNA
polymerase II subunit B2) (DNA-directed RNA polymerase
II subunit B) (RNA polymerase II subunit 2)
(DNA-directed RNA polymerase II 140 kDa polypeptide).
n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI00006A01AA
Length = 927
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459
[106][TOP]
>UniRef100_UPI0000EB23D9 DNA-directed RNA polymerase II subunit RPB2 (EC 2.7.7.6) (RNA
polymerase II subunit B2) (DNA-directed RNA polymerase
II subunit B) (RNA polymerase II subunit 2)
(DNA-directed RNA polymerase II 140 kDa polypeptide).
n=1 Tax=Canis lupus familiaris RepID=UPI0000EB23D9
Length = 1176
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459
[107][TOP]
>UniRef100_UPI0000F3357E UPI0000F3357E related cluster n=1 Tax=Bos taurus
RepID=UPI0000F3357E
Length = 1177
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 311 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 370
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 371 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 430
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 431 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 460
[108][TOP]
>UniRef100_UPI00003AD7E4 polymerase (RNA) II (DNA directed) polypeptide B, 140kDa n=1
Tax=Gallus gallus RepID=UPI00003AD7E4
Length = 1174
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459
[109][TOP]
>UniRef100_Q6PA46 MGC68569 protein n=1 Tax=Xenopus laevis RepID=Q6PA46_XENLA
Length = 949
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459
[110][TOP]
>UniRef100_Q5ZMN9 DNA-directed RNA polymerase n=1 Tax=Gallus gallus
RepID=Q5ZMN9_CHICK
Length = 1174
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459
[111][TOP]
>UniRef100_A5PJW8 DNA-directed RNA polymerase n=1 Tax=Bos taurus RepID=A5PJW8_BOVIN
Length = 1174
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459
[112][TOP]
>UniRef100_Q27446 DNA-directed RNA polymerase (Fragment) n=1 Tax=Artemia salina
RepID=Q27446_ARTSA
Length = 862
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YA++IL KE LPHVG+ + E +K +F GY++
Sbjct: 117 VIQEQNVALNFIGARGARPGVTKDKRIKYAREILQKEMLPHVGISDFCETKKAYFLGYMV 176
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPL++LLFR F+ +TKE +M Q+ +D GK+
Sbjct: 177 HRLLLAALGRRELDDRDHYGNKRLDLAGPLMSLLFRGLFKTLTKEVRMYAQKFIDRGKDF 236
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
++ IK IT GLK+ LATGNW +KA
Sbjct: 237 NIELA-IKPKFITDGLKYSLATGNWGDQKKA 266
[113][TOP]
>UniRef100_B4DR40 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DR40_HUMAN
Length = 1083
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 219 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 278
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 279 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 338
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 339 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 368
[114][TOP]
>UniRef100_B4DHJ3 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DHJ3_HUMAN
Length = 1167
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 303 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 362
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 363 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 422
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 423 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 452
[115][TOP]
>UniRef100_B4DH29 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DH29_HUMAN
Length = 1099
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 235 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 294
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 295 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 354
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 355 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 384
[116][TOP]
>UniRef100_A8MW88 DNA-directed RNA polymerase (Fragment) n=1 Tax=Homo sapiens
RepID=A8MW88_HUMAN
Length = 1173
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 309 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 368
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 369 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 428
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 429 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 458
[117][TOP]
>UniRef100_Q8CFI7 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Mus musculus
RepID=RPB2_MOUSE
Length = 1174
Score = 172 bits (435), Expect = 1e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDQKKA 459
[118][TOP]
>UniRef100_UPI0000D5712C PREDICTED: similar to AGAP003648-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D5712C
Length = 1175
Score = 171 bits (434), Expect = 2e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q++AL++IG RG VT+ KRI+YA++IL KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNIALNFIGTRGARPGVTKEKRIKYAREILQKEMLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE +M Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +IT GL++ LATGNW +KA
Sbjct: 430 NLDLA-IKTKLITDGLRYSLATGNWGDQKKA 459
[119][TOP]
>UniRef100_B7QNH8 DNA-directed RNA polymerase n=1 Tax=Ixodes scapularis
RepID=B7QNH8_IXOSC
Length = 1142
Score = 171 bits (434), Expect = 2e-41
Identities = 83/151 (54%), Positives = 112/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ +RI+Y+++IL KE LPHVGV + E +K ++ GY++
Sbjct: 310 VIQEQNVALNFIGARGAHPGVTKERRIKYSREILQKEMLPHVGVSDFCETKKAYYLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPL+A LFR FR +TKE +M Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLMAFLFRGLFRNLTKEVRMYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +IT GL++ LATGNW +KA
Sbjct: 430 NLELA-IKTRIITDGLRYSLATGNWGDQKKA 459
[120][TOP]
>UniRef100_Q9UVA0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pichia kudriavzevii
RepID=Q9UVA0_ISSOR
Length = 905
Score = 171 bits (434), Expect = 2e-41
Identities = 82/151 (54%), Positives = 112/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
+IQSQ+VALDYIG+RGN V + R +RIQ+AKDIL +EFLPH+ +E K +FFGY+I
Sbjct: 116 LIQSQEVALDYIGRRGNAVGIKRERRIQFAKDILQREFLPHISQDGGHETNKAYFFGYII 175
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
+RLL AL R+ +DDRDH+G KR+DLAGPLLA LFR FR+++++ MQR ++ G++
Sbjct: 176 NRLLLCALERKEQDDRDHFGKKRLDLAGPLLANLFRILFRKLSRDIYRYMQRCIEHGEDF 235
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
++ +KS IT GLK+ LATGNW +KA
Sbjct: 236 NIVSA-VKSTTITSGLKYSLATGNWGEQKKA 265
[121][TOP]
>UniRef100_A7XIE3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phymatotrichopsis
omnivora RepID=A7XIE3_9PEZI
Length = 884
Score = 171 bits (434), Expect = 2e-41
Identities = 81/151 (53%), Positives = 114/151 (75%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IGKRGN+ V + KRI+YA+DI+ KE LPH+ E +E RK FF GY++
Sbjct: 113 VIQDREVALDFIGKRGNSQGVNKEKRIRYARDIMQKELLPHISQKEGSETRKAFFLGYMV 172
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HR+L+ AL R+ DDRDH+G KR+DLAGPLLA LFR ++++TKE +++ ++ KE
Sbjct: 173 HRMLQCALERREVDDRDHFGKKRLDLAGPLLAQLFRNLWKQLTKEVYKYLEKCVEGSKEF 232
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L+ +KS+ IT GLK+ LATGNW+S +KA
Sbjct: 233 NLNLA-VKSNTITTGLKYSLATGNWASQKKA 262
[122][TOP]
>UniRef100_A1YID4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Gigaspora gigantea
RepID=A1YID4_9GLOM
Length = 894
Score = 171 bits (434), Expect = 2e-41
Identities = 83/150 (55%), Positives = 107/150 (71%)
Frame = +1
Query: 4 IQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIH 183
+QS +VA D+IG+RG T TR KRI+YAK+IL KE LPHV E RK FF GY++H
Sbjct: 112 VQSTEVAADWIGRRGTTTGATRDKRIKYAKEILQKELLPHVSTEYGCEKRKAFFLGYMVH 171
Query: 184 RLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVS 363
RLL ALGR+ DDRDHYG KR+DLAGPLLA LFR F+++TK+ + +++ +D +E +
Sbjct: 172 RLLLAALGRRELDDRDHYGKKRMDLAGPLLASLFRMLFKKLTKDISIYLRKCIDTSREFN 231
Query: 364 LHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
LH IK+ IT GLK+ LATGNW +KA
Sbjct: 232 LHLA-IKAQTITNGLKYSLATGNWGDQKKA 260
[123][TOP]
>UniRef100_A1YID3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glomus mosseae
RepID=A1YID3_GLOMO
Length = 883
Score = 171 bits (434), Expect = 2e-41
Identities = 83/150 (55%), Positives = 108/150 (72%)
Frame = +1
Query: 4 IQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIH 183
+QS +VA D+IG+RG T TR KRI+YAKDIL KE LPHV E RK FF GY++H
Sbjct: 112 VQSMEVAADWIGRRGTTTGATRDKRIKYAKDILQKELLPHVSTEYGCEKRKAFFLGYMVH 171
Query: 184 RLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVS 363
RLL ALGR+ DDRDHYG KR+DLAGPLLA LFR F+++TK+ + +++ +D+ +E +
Sbjct: 172 RLLLAALGRRELDDRDHYGKKRMDLAGPLLASLFRMLFKKLTKDVSIYLRKCIDSNREFN 231
Query: 364 LHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
L+ IK+ IT GLK+ LATGNW +KA
Sbjct: 232 LNLA-IKAQTITNGLKYSLATGNWGDQKKA 260
[124][TOP]
>UniRef100_A1YID2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glomus mosseae
RepID=A1YID2_GLOMO
Length = 883
Score = 171 bits (434), Expect = 2e-41
Identities = 83/150 (55%), Positives = 108/150 (72%)
Frame = +1
Query: 4 IQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIH 183
+QS +VA D+IG+RG T TR KRI+YAKDIL KE LPHV E RK FF GY++H
Sbjct: 112 VQSMEVAADWIGRRGTTTGATRDKRIKYAKDILQKELLPHVSTEYGCEKRKAFFLGYMVH 171
Query: 184 RLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVS 363
RLL ALGR+ DDRDHYG KR+DLAGPLLA LFR F+++TK+ + +++ +D+ +E +
Sbjct: 172 RLLLAALGRRELDDRDHYGKKRMDLAGPLLASLFRMLFKKLTKDVSIYLRKCIDSNREFN 231
Query: 364 LHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
L+ IK+ IT GLK+ LATGNW +KA
Sbjct: 232 LNLA-IKAQTITNGLKYSLATGNWGDQKKA 260
[125][TOP]
>UniRef100_A1YID0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mucor hiemalis
RepID=A1YID0_9FUNG
Length = 884
Score = 171 bits (433), Expect = 2e-41
Identities = 84/151 (55%), Positives = 109/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ QDVALD+IGKRG TV TR +RI+YA +IL KE LPHVG E RK +FFGY+I
Sbjct: 119 VIQDQDVALDFIGKRGTTVGATRERRIKYASEILQKELLPHVGTAYKTETRKSYFFGYMI 178
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDHYG KR+DLAG L++ LFR F+++TK+ +Q+ +++ +E
Sbjct: 179 HRLLLAALERRELDDRDHYGKKRMDLAGVLMSGLFRLLFKKLTKDVAKYLQKCIESSREF 238
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +KS+ IT GLK+ LATGNW +KA
Sbjct: 239 NLTLA-VKSNTITNGLKYSLATGNWGDQKKA 268
[126][TOP]
>UniRef100_UPI00017937B7 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide n=1 Tax=Acyrthosiphon pisum
RepID=UPI00017937B7
Length = 1101
Score = 171 bits (432), Expect = 3e-41
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ KRI+YA++IL KE LPHVGV + E +K +F GY++
Sbjct: 311 VIQEQNVALNFIGSRGARPGVTKDKRIKYAREILQKEMLPHVGVSDFCETKKAYFLGYMV 370
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL +LGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE +M Q+ +D GK+
Sbjct: 371 HRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYAQKFIDRGKDF 430
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +IT GL++ LATGNW +KA
Sbjct: 431 NLDLA-IKTKLITDGLRYSLATGNWGDQKKA 460
[127][TOP]
>UniRef100_UPI00015B44D8 PREDICTED: similar to ENSANGP00000011389 n=1 Tax=Nasonia
vitripennis RepID=UPI00015B44D8
Length = 1175
Score = 171 bits (432), Expect = 3e-41
Identities = 83/151 (54%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ +RI+YA++IL KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGARPGVTKERRIKYAREILQKETLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL +LGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE +M Q+ +D GK+
Sbjct: 370 HRLLSASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +IT GL++ LATGNW +KA
Sbjct: 430 NLELA-IKTKIITDGLRYSLATGNWGDQKKA 459
[128][TOP]
>UniRef100_Q6RYG3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Usnea cornuta
RepID=Q6RYG3_9LECA
Length = 903
Score = 170 bits (431), Expect = 4e-41
Identities = 82/151 (54%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IGKRGN+ VTR KRI+YA+DI+ KE LPH+ E +E RK FF GY++
Sbjct: 119 VIQDREVALDFIGKRGNSQGVTRDKRIKYARDIMQKELLPHISQVEGSETRKAFFLGYMV 178
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F ++TK+ +Q+ ++ KE
Sbjct: 179 HRLLQCALGRREVDDRDHFGKKRLDLAGPLLASLFRGTFNKLTKDVYKYLQKCVENNKEF 238
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
++ +KS +T GL++ LATGNW +KA
Sbjct: 239 NMTLA-VKSTHLTNGLRYSLATGNWGDQKKA 268
[129][TOP]
>UniRef100_Q5CY45 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium parvum Iowa II
RepID=Q5CY45_CRYPV
Length = 1177
Score = 170 bits (430), Expect = 5e-41
Identities = 80/146 (54%), Positives = 103/146 (70%)
Frame = +1
Query: 10 SQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIHRL 189
SQDV LD+IGKRG TV R KRIQYAK++ KE LPHVGV +E RK +F GY++H+L
Sbjct: 307 SQDVCLDFIGKRGPTVGAAREKRIQYAKELFEKELLPHVGVTSGSESRKAYFIGYMVHKL 366
Query: 190 LRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVSLH 369
ALGR PEDDRDH+G KR+DLAGPL+A F QCFR+M K+ + +QR +D GKE +
Sbjct: 367 CLGALGRVPEDDRDHFGKKRLDLAGPLVAASFGQCFRKMMKDVRRLLQRNIDNGKEFDVA 426
Query: 370 GGHIKSDVITKGLKFPLATGNWSSDR 447
G + IT+ +++ ATGNW D+
Sbjct: 427 GVIRSASYITQTIQYQFATGNWGKDK 452
[130][TOP]
>UniRef100_Q5CN11 DNA-directed RNA polymerase II second largest chain n=1
Tax=Cryptosporidium hominis RepID=Q5CN11_CRYHO
Length = 733
Score = 170 bits (430), Expect = 5e-41
Identities = 80/146 (54%), Positives = 103/146 (70%)
Frame = +1
Query: 10 SQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIHRL 189
SQDV LD+IGKRG TV R KRIQYAK++ KE LPHVGV +E RK +F GY++H+L
Sbjct: 307 SQDVCLDFIGKRGPTVGAAREKRIQYAKELFEKELLPHVGVTSGSESRKAYFIGYMVHKL 366
Query: 190 LRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVSLH 369
ALGR PEDDRDH+G KR+DLAGPL+A F QCFR+M K+ + +QR +D GKE +
Sbjct: 367 CLGALGRVPEDDRDHFGKKRLDLAGPLVAASFGQCFRKMMKDVRRLLQRNIDNGKEFDVA 426
Query: 370 GGHIKSDVITKGLKFPLATGNWSSDR 447
G + IT+ +++ ATGNW D+
Sbjct: 427 GVIRSASYITQTIQYQFATGNWGKDK 452
[131][TOP]
>UniRef100_Q6RYI7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Baeomyces sp. SLJ472
RepID=Q6RYI7_9LECA
Length = 894
Score = 170 bits (430), Expect = 5e-41
Identities = 79/151 (52%), Positives = 113/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IGKRGN+ ++TR KRI+YA+DI+ KE LPH+ E +E RK FF GY++
Sbjct: 110 VIQDREVALDFIGKRGNSNSITRDKRIKYARDIVVKELLPHISQTEGSETRKAFFLGYMV 169
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HR+L+V LGR+ DDRDH+G KR+DLAGPL+A LFR F ++ K+ +++ +++ +E
Sbjct: 170 HRMLQVVLGRREPDDRDHFGKKRLDLAGPLMAGLFRMLFNKLVKDVYNYLKKCVESNREF 229
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L G +KS +T GLK+ LATGNW +KA
Sbjct: 230 NLSLG-VKSTTLTNGLKYSLATGNWGDQKKA 259
[132][TOP]
>UniRef100_Q6RYH5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Diploschistes
muscorum RepID=Q6RYH5_9LECA
Length = 901
Score = 170 bits (430), Expect = 5e-41
Identities = 78/151 (51%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
V+Q ++VALD+IGKR N + R KRI++A+DI+ KE LPH+ E +E RK FF GY++
Sbjct: 118 VVQDREVALDHIGKRSNALGQPRDKRIRHARDIMQKELLPHISQSEGSETRKAFFLGYMV 177
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HR+L+VALGR+ DDRDH+G KR+DLAGPL+A LFR F R+TK+ +Q+ ++ ++
Sbjct: 178 HRMLQVALGRREPDDRDHFGKKRLDLAGPLMASLFRSLFNRLTKDVLKYLQKCIEGNRDF 237
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
++ G +KS +T GLK+ LATGNWS +KA
Sbjct: 238 NIALG-VKSTTLTNGLKYSLATGNWSEQKKA 267
[133][TOP]
>UniRef100_Q6RYH4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hydnum repandum
RepID=Q6RYH4_9HOMO
Length = 887
Score = 170 bits (430), Expect = 5e-41
Identities = 81/151 (53%), Positives = 112/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD IGKRG T +++ KR++YA++IL KE LPHV +GE +E +K FFFGY+I
Sbjct: 120 VIQEREVALDLIGKRGTTTGLSKDKRLRYAQEILQKEMLPHVSMGEGSESKKAFFFGYMI 179
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ +Q+ ++ K+
Sbjct: 180 HRLLLAALERRELDDRDHFGKKRLDLAGPLLASLFRMLFRKLTKDVYRHLQKCVETHKDF 239
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
++ +KS+ IT GLK+ LATGNW +K+
Sbjct: 240 NISIA-VKSNTITNGLKYSLATGNWGDQKKS 269
[134][TOP]
>UniRef100_B6K5Q5 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6K5Q5_SCHJY
Length = 1210
Score = 170 bits (430), Expect = 5e-41
Identities = 85/152 (55%), Positives = 110/152 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ +DVALDYIGKRG+T VTR KR++YA DIL KE LPH+ E E RK FF GY++
Sbjct: 309 VIQDKDVALDYIGKRGSTTGVTREKRLRYAHDILQKEMLPHITTLEGFETRKAFFLGYMV 368
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HR+L AL R+ DDRDH+G KR+DLAGPLLA LFR F++MT++ MQ+ ++ +E
Sbjct: 369 HRMLLCALERREPDDRDHFGKKRLDLAGPLLASLFRMLFKKMTRDVYKYMQKCVETNREF 428
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKAG 456
+L +KS+ IT GL++ LATGNW D+K G
Sbjct: 429 NLTLA-VKSNTITNGLRYSLATGNW-GDQKRG 458
[135][TOP]
>UniRef100_B7FVG3 DNA-directed RNA polymerase n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B7FVG3_PHATR
Length = 1212
Score = 169 bits (429), Expect = 7e-41
Identities = 84/145 (57%), Positives = 106/145 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ QDVALD+IG+RG+ VT+ R++YA+ IL KE LPHVG E E +KGFF GY +
Sbjct: 336 VIQRQDVALDFIGRRGSARDVTKEDRMRYAQAILQKEVLPHVGTEEHCETKKGFFIGYAV 395
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
H+LL LGR EDDRDH+G KR+DLAGPLL LFR FR++TK+ + +QR +D GK
Sbjct: 396 HKLLMCRLGRAEEDDRDHFGKKRLDLAGPLLGGLFRVLFRKLTKDVRKHLQRCLDEGKHF 455
Query: 361 SLHGGHIKSDVITKGLKFPLATGNW 435
++ G IKS+ IT GLK+ LATGNW
Sbjct: 456 NI-GAAIKSNHITDGLKYSLATGNW 479
[136][TOP]
>UniRef100_Q6RYG5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Taphrina deformans
RepID=Q6RYG5_9ASCO
Length = 936
Score = 169 bits (429), Expect = 7e-41
Identities = 81/150 (54%), Positives = 108/150 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IGKRG+ + VT+ KR++YA+DIL KE LPH+ E E RK FF GY++
Sbjct: 117 VIQDREVALDFIGKRGSAIGVTKEKRLRYAQDILQKEMLPHITTSEGFETRKAFFLGYMV 176
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR F+R+TK+ + M + +D+GKE
Sbjct: 177 HRLLLCALERRDPDDRDHFGKKRIDLAGPLLAGLFRMLFKRLTKDIRQYMTKCVDSGKEF 236
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRK 450
+L +K IT GL++ LATG W +K
Sbjct: 237 NLPLA-VKHTTITNGLRYSLATGTWGDQKK 265
[137][TOP]
>UniRef100_UPI00017B4CC9 UPI00017B4CC9 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B4CC9
Length = 1147
Score = 169 bits (428), Expect = 9e-41
Identities = 83/151 (54%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ +RI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 283 VIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 342
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 343 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQKFIDRGKDF 402
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 403 NLELA-IKTRIISDGLKYSLATGNWGDVKKA 432
[138][TOP]
>UniRef100_UPI00016DFC9D UPI00016DFC9D related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016DFC9D
Length = 1045
Score = 169 bits (428), Expect = 9e-41
Identities = 83/151 (54%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ +RI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 119 VIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 178
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 179 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQKFIDRGKDF 238
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 239 NLELA-IKTRIISDGLKYSLATGNWGDVKKA 268
[139][TOP]
>UniRef100_Q4T1Y4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon
nigroviridis RepID=Q4T1Y4_TETNG
Length = 1217
Score = 169 bits (428), Expect = 9e-41
Identities = 83/151 (54%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ +RI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 283 VIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMV 342
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 343 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQKFIDRGKDF 402
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 403 NLELA-IKTRIISDGLKYSLATGNWGDVKKA 432
[140][TOP]
>UniRef100_UPI0001B09250 DNA directed RNA polymerase II polypeptide B n=1 Tax=Danio rerio
RepID=UPI0001B09250
Length = 1174
Score = 169 bits (427), Expect = 1e-40
Identities = 83/151 (54%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ +RI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEVLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDVKKA 459
[141][TOP]
>UniRef100_Q6DRH1 RNA polymerase II subunit B (Fragment) n=1 Tax=Danio rerio
RepID=Q6DRH1_DANRE
Length = 562
Score = 169 bits (427), Expect = 1e-40
Identities = 83/151 (54%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ +RI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEVLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDVKKA 459
[142][TOP]
>UniRef100_C0HA74 DNA-directed RNA polymerase n=1 Tax=Salmo salar RepID=C0HA74_SALSA
Length = 1174
Score = 169 bits (427), Expect = 1e-40
Identities = 83/151 (54%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VT+ +RI+YAK++L KE LPHVGV + E +K +F GY++
Sbjct: 310 VIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEVLPHVGVSDFCETKKAYFLGYMV 369
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 370 HRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQKFIDRGKDF 429
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 430 NLELA-IKTRIISDGLKYSLATGNWGDVKKA 459
[143][TOP]
>UniRef100_Q873V3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Echinodontium
tinctorium RepID=Q873V3_9HOMO
Length = 871
Score = 169 bits (427), Expect = 1e-40
Identities = 81/151 (53%), Positives = 110/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ +D+ALD+IG RG T ++R +RI+YA++IL KE LPHV + E +E RK +FFGY+I
Sbjct: 93 VIQDRDIALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMSEGSESRKAYFFGYMI 152
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL A+ R+ DDRDH+G KR+DLAGPLLA LFR FR++T++ +Q+ ++ KE
Sbjct: 153 HRLLLAAMERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTRDVYRHLQKCVETHKEF 212
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L+ IK IT GLK+ LATGNW +KA
Sbjct: 213 NLNLA-IKHTTITNGLKYSLATGNWGDQKKA 242
[144][TOP]
>UniRef100_Q207G5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Sparassis crispa
RepID=Q207G5_9APHY
Length = 900
Score = 168 bits (425), Expect = 2e-40
Identities = 79/151 (52%), Positives = 112/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T + R +R++YA++IL KE LPH+ + E +E +K +FFGY+I
Sbjct: 102 VIQDREVALDFIGNRGTTTGLNRERRLRYAQEILQKEMLPHISMAEGSESKKAYFFGYMI 161
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ +Q+ +++ KE
Sbjct: 162 HRLLLAALERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVESHKEF 221
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L+ +KS+ IT GLK+ LATGNW +K+
Sbjct: 222 NLNLA-VKSNTITNGLKYSLATGNWGDQKKS 251
[145][TOP]
>UniRef100_C5FJF0 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
RepID=C5FJF0_NANOT
Length = 1258
Score = 168 bits (425), Expect = 2e-40
Identities = 80/152 (52%), Positives = 115/152 (75%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALD+I KRG++ +++ + KR++YA+DI+ KEFLPH+ E +E RK FF GY+
Sbjct: 344 VIQDREVALDFISKRGSSPMSMNQEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYM 403
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+HRLL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F R+TK+ +QR ++ G++
Sbjct: 404 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRVLFMRLTKDLYKYVQRCVETGRQ 463
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ L+ G +K+ +T GLK+ LATGNW +KA
Sbjct: 464 LYLNIG-VKASTLTGGLKYALATGNWGEQKKA 494
[146][TOP]
>UniRef100_A1YIE3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neocallimastix
frontalis RepID=A1YIE3_NEOFR
Length = 915
Score = 168 bits (425), Expect = 2e-40
Identities = 80/150 (53%), Positives = 108/150 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ +++ALD+IGKRG TV VT+ KRI+YA +IL KE LPH+G E +K +FFGY+I
Sbjct: 122 VIQDKEIALDFIGKRGTTVGVTKEKRIRYAAEILQKELLPHIGTRAHTETKKAYFFGYMI 181
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLL LFR FR++TK+ ++Q +D +E
Sbjct: 182 HRLLLAALERRECDDRDHFGKKRLDLAGPLLGSLFRMLFRKLTKDVSKTLQMCIDRNREF 241
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRK 450
+L+ I+ + I+ GLK+ LATGNW + K
Sbjct: 242 NLNSA-IRPNTISDGLKYSLATGNWGAQSK 270
[147][TOP]
>UniRef100_A1YIE4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neocallimastix
frontalis RepID=A1YIE4_NEOFR
Length = 915
Score = 167 bits (424), Expect = 3e-40
Identities = 80/150 (53%), Positives = 108/150 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ +++ALD+IGKRG TV VT+ KR++YA +IL KE LPH+G E +K +FFGY+I
Sbjct: 122 VIQDKEIALDFIGKRGTTVGVTKEKRMRYAAEILQKELLPHIGTKAHTETKKAYFFGYMI 181
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLL LFR FR++T + S+Q+ +D +E
Sbjct: 182 HRLLLAALERRECDDRDHFGKKRLDLAGPLLGSLFRMLFRKLTSDVSKSLQKCIDRNREF 241
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRK 450
+L+ I+ + IT GLK+ LATGNW + K
Sbjct: 242 NLNVA-IRPNTITDGLKYSLATGNWGAQSK 270
[148][TOP]
>UniRef100_UPI0000ECC4A8 polymerase (RNA) II (DNA directed) polypeptide B, 140kDa n=1
Tax=Gallus gallus RepID=UPI0000ECC4A8
Length = 1176
Score = 167 bits (423), Expect = 3e-40
Identities = 84/152 (55%), Positives = 111/152 (73%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGY-V 177
VIQ Q+VAL++IG RG VT+ KRI+YAK++L KE LPHVGV + E +K +F GY +
Sbjct: 311 VIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYYM 370
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+HRLL ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 371 VHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKD 430
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L IK+ +I+ GLK+ LATGNW +KA
Sbjct: 431 FNLELA-IKTRIISDGLKYSLATGNWGDQKKA 461
[149][TOP]
>UniRef100_B8C598 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana
CCMP1335 RepID=B8C598_THAPS
Length = 1196
Score = 167 bits (423), Expect = 3e-40
Identities = 83/145 (57%), Positives = 105/145 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VALD+IG+RG+ VT+ RI+YA IL KE LPHVG E E +KGFF GY +
Sbjct: 318 VIQKQEVALDFIGRRGSARDVTKDDRIRYAAGILQKEVLPHVGTEEHCETKKGFFLGYAV 377
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
H+LL LGR EDDRDH+G KR+DLAGPLL LFR FR++TK+ + +QR +D GK
Sbjct: 378 HKLLMCKLGRADEDDRDHFGKKRLDLAGPLLGGLFRVLFRKLTKDVRKHLQRCLDEGKHF 437
Query: 361 SLHGGHIKSDVITKGLKFPLATGNW 435
++ G IKS+ I+ GLK+ LATGNW
Sbjct: 438 NI-GAAIKSNHISDGLKYSLATGNW 461
[150][TOP]
>UniRef100_Q9UV93 DNA-directed RNA polymerase (Fragment) n=1 Tax=Trichophyton rubrum
RepID=Q9UV93_TRIRU
Length = 1109
Score = 167 bits (423), Expect = 3e-40
Identities = 80/152 (52%), Positives = 115/152 (75%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALD+I KRG++ +++ + KR++YA+DI+ KEFLPH+ E +E RK FF GY+
Sbjct: 291 VIQDREVALDFISKRGSSPMSMNQEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYM 350
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+HRLL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F R+TK+ +QR ++ G++
Sbjct: 351 VHRLLQCALGRRYVDDRDHFGKKRLDLAGPLLANLFRVLFMRLTKDLYKYVQRCVETGRQ 410
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ L+ G +K+ +T GLK+ LATGNW +KA
Sbjct: 411 LYLNIG-VKASTLTGGLKYALATGNWGEQKKA 441
[151][TOP]
>UniRef100_Q873V5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dacrymyces
chrysospermus RepID=Q873V5_9BASI
Length = 870
Score = 167 bits (423), Expect = 3e-40
Identities = 78/150 (52%), Positives = 108/150 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALDYIG+RG T ++R KR++YA++IL KE LPH+ E E +K +FFGY++
Sbjct: 100 VIQDREVALDYIGRRGTTTGLSREKRLRYAQEILQKEMLPHISTQEGAESKKAYFFGYMV 159
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRL+ AL R+ DDRDH+G KR+DLAGPLLA LFR FRR+TK+ MQ+ ++ +E
Sbjct: 160 HRLVLAALDRRELDDRDHFGKKRLDLAGPLLATLFRMLFRRLTKDVYRYMQKCVETHREF 219
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRK 450
+++ +K IT GLK+ LATGNW +K
Sbjct: 220 NINAA-VKPATITNGLKYSLATGNWGDQKK 248
[152][TOP]
>UniRef100_Q873V0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Gautieria otthii
RepID=Q873V0_9HOMO
Length = 856
Score = 167 bits (423), Expect = 3e-40
Identities = 78/151 (51%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ +DVALD+IG RG T+ ++R +R++YA++IL KE LPH+ + E E +K +FFGY++
Sbjct: 96 VIQDRDVALDFIGNRGTTIGLSRDRRLRYAQEILQKEMLPHIAMSEGAESKKAYFFGYMV 155
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ +Q+ ++ KE
Sbjct: 156 HRLLLAALERRELDDRDHFGKKRLDLAGPLLASLFRMLFRKLTKDVYRYLQKCVETHKEF 215
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L+ +K + IT GLK+ LATGNW +K+
Sbjct: 216 NLNLA-VKPNTITNGLKYSLATGNWGDQKKS 245
[153][TOP]
>UniRef100_Q6RYG7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pneumocystis carinii
RepID=Q6RYG7_PNECA
Length = 898
Score = 167 bits (423), Expect = 3e-40
Identities = 81/150 (54%), Positives = 108/150 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IGKRG+ V + R KR++YA+DIL KE LPH+ E E RK FF GY+I
Sbjct: 118 VIQEREVALDFIGKRGSAVGINREKRLRYAQDILQKELLPHITTTEGYETRKAFFLGYMI 177
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR F+++TK+ MQ+ ++ +E
Sbjct: 178 HRLLLCALERRDPDDRDHFGKKRLDLAGPLLANLFRMLFKKLTKDVYKYMQKCVETNREF 237
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRK 450
+L +KS+ IT GL++ LATGNW +K
Sbjct: 238 NLTLA-VKSNTITHGLRYSLATGNWGDQKK 266
[154][TOP]
>UniRef100_Q6CAD6 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6CAD6_YARLI
Length = 1229
Score = 167 bits (423), Expect = 3e-40
Identities = 79/151 (52%), Positives = 110/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALDYIG+RG+ V V R +R++YA+DIL KE LPH+ E E RK +F GY++
Sbjct: 315 VIQDREVALDYIGRRGSAVGVNRERRVRYARDILQKELLPHITQEEGFETRKAYFLGYMV 374
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HR+L VALGR+ DDRDH+G KR+DLAGPL+A +FR F+++TK+ M + ++ K+
Sbjct: 375 HRMLLVALGRKEPDDRDHFGKKRLDLAGPLMAGIFRMLFKKLTKDIYRYMLKCVETNKDF 434
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +KS+ IT GLK+ LATGNW +KA
Sbjct: 435 NLTLA-VKSNTITNGLKYSLATGNWGDQKKA 464
[155][TOP]
>UniRef100_UPI0001926137 PREDICTED: similar to predicted protein n=1 Tax=Hydra
magnipapillata RepID=UPI0001926137
Length = 1426
Score = 167 bits (422), Expect = 4e-40
Identities = 80/151 (52%), Positives = 108/151 (71%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
V+Q Q+VAL++IG RG VT+ KRI+YA++IL KE LPHVG + E +K +F GY++
Sbjct: 315 VVQEQNVALNFIGTRGARPGVTKEKRIKYAREILQKEMLPHVGTSDFCETKKAYFLGYMV 374
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HR+L ALGR+ DDRDHYGNKR+DLAGPLLA LFR F+ + KE ++ Q+ +D GK+
Sbjct: 375 HRILLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRLYAQKFIDKGKDF 434
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ IK+ IT GL++ LATGNW +KA
Sbjct: 435 KIELA-IKTKTITDGLRYSLATGNWGDQKKA 464
[156][TOP]
>UniRef100_Q6RYG9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Peltigera
membranacea RepID=Q6RYG9_9LECA
Length = 895
Score = 167 bits (422), Expect = 4e-40
Identities = 77/151 (50%), Positives = 112/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RGN+ +++R KR++YA+DI+ KE LPH+ + +E +K FF GY++
Sbjct: 111 VIQDREVALDWIGSRGNSQSLSRPKRVKYARDIMQKELLPHISQTDGSETKKAFFLGYMV 170
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HR+L+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F ++TK+ +Q+ ++ +E
Sbjct: 171 HRMLQCALGRREVDDRDHFGKKRLDLAGPLLAGLFRMLFNKLTKDVFKYLQKCVENNREF 230
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L G +KS +T GLK+ LATGNW +KA
Sbjct: 231 NLTLG-VKSTTLTNGLKYSLATGNWGDQKKA 260
[157][TOP]
>UniRef100_Q207G7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Polyporus squamosus
RepID=Q207G7_9APHY
Length = 898
Score = 167 bits (422), Expect = 4e-40
Identities = 78/151 (51%), Positives = 110/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ +++ALD+IG RG T+ + R +R++YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 103 VIQDREIALDFIGNRGTTIGLNRERRLRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 162
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ +Q+ ++ KE
Sbjct: 163 HRLLLAALERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRHLQKCVEMNKEF 222
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K + IT GLK+ LATGNW +K+
Sbjct: 223 NLSLA-VKHNTITNGLKYSLATGNWGDQKKS 252
[158][TOP]
>UniRef100_Q9UV78 DNA-directed RNA polymerase (Fragment) n=1 Tax=Morchella elata
RepID=Q9UV78_9PEZI
Length = 927
Score = 166 bits (421), Expect = 6e-40
Identities = 77/151 (50%), Positives = 112/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IGKRG++ + + KRI+YA+DI+ KE LPH+ E +E RK FF GY++
Sbjct: 119 VIQDREVALDFIGKRGSSQGINKEKRIRYARDIMQKELLPHISQSEGSETRKAFFLGYMV 178
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HR+L+ AL R+ DDRDH+G KR+DLAGPLLA LFR ++++TK+ +++ ++ GK+
Sbjct: 179 HRMLQCALERREVDDRDHFGKKRLDLAGPLLAGLFRTLWKKLTKDVYKYLEKCVETGKDF 238
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +KS+ IT GLK+ LATGNW +KA
Sbjct: 239 NLTLA-VKSNTITNGLKYSLATGNWGEQKKA 268
[159][TOP]
>UniRef100_Q873T6 RNA polymerase II subunit RPB2 (Fragment) n=1 Tax=Polyporus
arcularius RepID=Q873T6_9APHY
Length = 750
Score = 166 bits (421), Expect = 6e-40
Identities = 79/151 (52%), Positives = 109/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ +++ALDYIG RG T + R +R++YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 95 VIQDREIALDYIGNRGTTTGLNRERRLRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 154
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ +Q+ ++ KE
Sbjct: 155 HRLLLAALERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 214
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K + IT GLK+ LATGNW +K+
Sbjct: 215 NLSLA-VKHNTITNGLKYSLATGNWGDQKKS 244
[160][TOP]
>UniRef100_Q207G6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pycnoporus sp.
ZW02.30 RepID=Q207G6_9APHY
Length = 896
Score = 166 bits (421), Expect = 6e-40
Identities = 79/151 (52%), Positives = 109/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ +++ALDYIG RG T + R +R++YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 103 VIQDREIALDYIGNRGTTTGLNRERRLRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 162
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ +Q+ ++ KE
Sbjct: 163 HRLLLAALERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 222
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K + IT GLK+ LATGNW +K+
Sbjct: 223 NLSLA-VKHNTITNGLKYSLATGNWGDQKKS 252
[161][TOP]
>UniRef100_Q873S3 RNA polymerase II subunit RPB2 (Fragment) n=1 Tax=Coltricia
perennis RepID=Q873S3_9HOMO
Length = 803
Score = 166 bits (420), Expect = 7e-40
Identities = 78/151 (51%), Positives = 112/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ +++ALD+IG RG ++R KRI+YA++IL KE LPH+ + E +E +K +F GY+I
Sbjct: 111 VIQDREIALDFIGNRGTATGLSREKRIRYAQEILQKEMLPHISMSEGSESKKAYFLGYMI 170
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR+MTK+ +Q+ +++ +E
Sbjct: 171 HRLLLAALERRELDDRDHFGKKRLDLAGPLLAGLFRMLFRKMTKDVYRYLQKCVESHREF 230
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+++ +K++VIT GLK+ LATGNW +KA
Sbjct: 231 NINLA-VKTNVITNGLKYSLATGNWGDQKKA 260
[162][TOP]
>UniRef100_Q6RYG8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phragmidium sp. MB
RepID=Q6RYG8_9BASI
Length = 931
Score = 166 bits (420), Expect = 7e-40
Identities = 77/150 (51%), Positives = 110/150 (73%)
Frame = +1
Query: 4 IQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIH 183
IQ Q+VALD+IG+RG + ++R +R+QYA++IL KE LPH+ + E + +K +FFGY++H
Sbjct: 121 IQEQEVALDFIGRRGTSTGLSRERRLQYAEEILQKEMLPHISMSEGQQGKKAYFFGYMVH 180
Query: 184 RLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVS 363
RLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ +Q+ ++ K +
Sbjct: 181 RLLLAALDRRDLDDRDHFGKKRLDLAGPLLASLFRILFRKLTKDVYRHLQKCVEMQKPFN 240
Query: 364 LHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
L+ +KS+ IT GLK+ LATGNW +KA
Sbjct: 241 LNAA-VKSNTITNGLKYSLATGNWGDQKKA 269
[163][TOP]
>UniRef100_Q207G2 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Trametes versicolor RepID=Q207G2_TRAVE
Length = 518
Score = 166 bits (420), Expect = 7e-40
Identities = 79/150 (52%), Positives = 107/150 (71%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ +++ALDYIG RG T + R +R++YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 92 VIQDREIALDYIGNRGTTTGLNRERRLRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 151
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL A R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ +Q+ ++ KE
Sbjct: 152 HRLLLAAFERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 211
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRK 450
L G +K + IT GLK+ LATGNW +K
Sbjct: 212 QL-GLAVKHNTITNGLKYSLATGNWGDQKK 240
[164][TOP]
>UniRef100_Q10578 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Caenorhabditis
elegans RepID=RPB2_CAEEL
Length = 1193
Score = 166 bits (420), Expect = 7e-40
Identities = 83/151 (54%), Positives = 108/151 (71%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VTR +RI+YA++IL KE LPHVGV E E +K FF GY++
Sbjct: 316 VIQEQNVALNFIGARGAKPGVTREQRIKYAREILQKELLPHVGVSEHCETKKAFFIGYMV 375
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDH GNKR+DLAGPLLA LFR FR + KE +M+ Q+ ++ +
Sbjct: 376 HRLLLAALGRRELDDRDHIGNKRLDLAGPLLAFLFRSLFRNLLKEMRMTAQKYINKNDDF 435
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K+ IT+GL + LATGNW +KA
Sbjct: 436 AL-DVCVKTSTITRGLTYSLATGNWGDQKKA 465
[165][TOP]
>UniRef100_UPI0000221AC5 hypothetical protein CBG18197 n=1 Tax=Caenorhabditis briggsae AF16
RepID=UPI0000221AC5
Length = 1194
Score = 166 bits (419), Expect = 1e-39
Identities = 83/151 (54%), Positives = 108/151 (71%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VTR +RI+YA++IL KE LPHVGV E E +K FF GY++
Sbjct: 317 VIQEQNVALNFIGARGAKPGVTREQRIKYAREILQKELLPHVGVSEHCETKKAFFIGYMV 376
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDH GNKR+DLAGPLLA LFR FR + KE +M+ Q+ ++ +
Sbjct: 377 HRLLLAALGRRELDDRDHIGNKRLDLAGPLLAFLFRALFRNLLKEMRMTAQKYINKNDDF 436
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K+ IT+GL + LATGNW +KA
Sbjct: 437 AL-DVCVKTSTITRGLAYSLATGNWGDQKKA 466
[166][TOP]
>UniRef100_A8XS50 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae
RepID=A8XS50_CAEBR
Length = 1215
Score = 166 bits (419), Expect = 1e-39
Identities = 83/151 (54%), Positives = 108/151 (71%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ Q+VAL++IG RG VTR +RI+YA++IL KE LPHVGV E E +K FF GY++
Sbjct: 338 VIQEQNVALNFIGARGAKPGVTREQRIKYAREILQKELLPHVGVSEHCETKKAFFIGYMV 397
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL ALGR+ DDRDH GNKR+DLAGPLLA LFR FR + KE +M+ Q+ ++ +
Sbjct: 398 HRLLLAALGRRELDDRDHIGNKRLDLAGPLLAFLFRALFRNLLKEMRMTAQKYINKNDDF 457
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K+ IT+GL + LATGNW +KA
Sbjct: 458 AL-DVCVKTSTITRGLAYSLATGNWGDQKKA 487
[167][TOP]
>UniRef100_Q9UVA3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Agaricus bisporus
RepID=Q9UVA3_AGABI
Length = 914
Score = 166 bits (419), Expect = 1e-39
Identities = 80/151 (52%), Positives = 109/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 115 VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 174
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ +Q+ ++ KE
Sbjct: 175 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 234
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K IT GLK+ LATGNW +K+
Sbjct: 235 NL-ALAVKHQTITNGLKYSLATGNWGDQKKS 264
[168][TOP]
>UniRef100_Q873V7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Chondrostereum
purpureum RepID=Q873V7_9AGAR
Length = 770
Score = 166 bits (419), Expect = 1e-39
Identities = 80/151 (52%), Positives = 109/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 106 VIQDREVALDFIGNRGTTTGLSRDRRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 165
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ +Q+ ++ KE
Sbjct: 166 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 225
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K IT GLK+ LATGNW +K+
Sbjct: 226 NLSLA-VKHQTITNGLKYSLATGNWGDQKKS 255
[169][TOP]
>UniRef100_Q873U3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Lycoperdon pyriforme
RepID=Q873U3_9AGAR
Length = 849
Score = 166 bits (419), Expect = 1e-39
Identities = 80/151 (52%), Positives = 109/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 90 VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 149
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ +Q+ ++ KE
Sbjct: 150 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 209
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K IT GLK+ LATGNW +K+
Sbjct: 210 NL-ALAVKHQTITNGLKYSLATGNWGDQKKS 239
[170][TOP]
>UniRef100_Q873T2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Henningsomyces
candidus RepID=Q873T2_9AGAR
Length = 848
Score = 166 bits (419), Expect = 1e-39
Identities = 80/151 (52%), Positives = 110/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T ++R KRI+YA++IL KE +PHV + E +E +K +FFGY+I
Sbjct: 91 VIQDREVALDFIGNRGTTTGLSRDKRIRYAQEILQKEMIPHVSMAEGSESKKAYFFGYMI 150
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR+++K+ +Q+ ++A KE
Sbjct: 151 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLSKDVYRYLQKCVEAQKEF 210
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K IT GLK+ LATGNW +K+
Sbjct: 211 NL-ALAVKHQTITNGLKYSLATGNWGDQKKS 240
[171][TOP]
>UniRef100_Q5S3M2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phyllotopsis sp.
MB35 RepID=Q5S3M2_9APHY
Length = 889
Score = 166 bits (419), Expect = 1e-39
Identities = 80/151 (52%), Positives = 109/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 97 VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 156
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ +Q+ ++ KE
Sbjct: 157 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 216
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K IT GLK+ LATGNW +K+
Sbjct: 217 NL-ALAVKHQTITNGLKYSLATGNWGDQKKS 246
[172][TOP]
>UniRef100_Q27S75 DNA-directed RNA polymerase (Fragment) n=1 Tax=Macrolepiota
dolichaula RepID=Q27S75_9AGAR
Length = 882
Score = 166 bits (419), Expect = 1e-39
Identities = 80/151 (52%), Positives = 109/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 98 VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 157
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ +Q+ ++ KE
Sbjct: 158 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 217
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K IT GLK+ LATGNW +K+
Sbjct: 218 NL-ALAVKHQTITNGLKYSLATGNWGDQKKS 247
[173][TOP]
>UniRef100_Q207H1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ganoderma tsugae
RepID=Q207H1_GANTS
Length = 883
Score = 166 bits (419), Expect = 1e-39
Identities = 78/151 (51%), Positives = 109/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ +++ALDYIG RG T + R +R++YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 97 VIQDREIALDYIGNRGTTTGLNRERRLRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 156
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ +Q+ ++ KE
Sbjct: 157 HRLLLAALERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 216
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
++ +K + IT GLK+ LATGNW +K+
Sbjct: 217 NISLA-VKHNTITNGLKYSLATGNWGDQKKS 246
[174][TOP]
>UniRef100_B0CRB3 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0CRB3_LACBS
Length = 942
Score = 166 bits (419), Expect = 1e-39
Identities = 80/151 (52%), Positives = 109/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 108 VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 167
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ +Q+ ++ KE
Sbjct: 168 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 227
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K IT GLK+ LATGNW +K+
Sbjct: 228 NL-ALAVKHQTITNGLKYSLATGNWGDQKKS 257
[175][TOP]
>UniRef100_Q5U7W8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Albatrellus
higanensis RepID=Q5U7W8_9HOMO
Length = 913
Score = 165 bits (418), Expect = 1e-39
Identities = 79/151 (52%), Positives = 109/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T + R +R++YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 102 VIQDREVALDFIGNRGTTTGLNRERRLRYAQEILQKEMLPHVSMNEGSESKKAYFFGYMI 161
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ +Q+ ++ KE
Sbjct: 162 HRLLLAALERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 221
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K + IT GLK+ LATGNW +K+
Sbjct: 222 NLSLA-VKHNTITNGLKYSLATGNWGDQKKS 251
[176][TOP]
>UniRef100_Q207G9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Laetiporus
sulphureus RepID=Q207G9_9APHY
Length = 897
Score = 165 bits (418), Expect = 1e-39
Identities = 78/151 (51%), Positives = 110/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T + R +R++YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 102 VIQDREVALDFIGNRGTTTGLNRERRLRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 161
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL A+ R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ +Q+ ++ KE
Sbjct: 162 HRLLLAAMERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 221
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L+ +K + IT GLK+ LATGNW +K+
Sbjct: 222 NLNLA-VKHNTITNGLKYSLATGNWGDQKKS 251
[177][TOP]
>UniRef100_Q9UVA2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neolecta vitellina
RepID=Q9UVA2_9ASCO
Length = 930
Score = 165 bits (417), Expect = 2e-39
Identities = 80/151 (52%), Positives = 110/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ +D+ALDYIGKRG T ++R +RI++A++I+ KE LPHV E E RK FF GY++
Sbjct: 120 VIQEKDLALDYIGKRGQTTGLSRDRRIRHAREIMQKELLPHVSQTEGYESRKAFFLGYMV 179
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL VAL R+ +DDRDH+G KR+DLAGPLLA LFR F+++ K+ MQ+ ++ +E
Sbjct: 180 HRLLLVALERREQDDRDHFGKKRLDLAGPLLANLFRMLFKKLYKDVYRYMQKCVENNREF 239
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K+ IT+GLK+ LATGNW +KA
Sbjct: 240 NLTLA-VKAPTITQGLKYSLATGNWGEQKKA 269
[178][TOP]
>UniRef100_Q9UV94 DNA-directed RNA polymerase (Fragment) n=1 Tax=Byssochlamys nivea
RepID=Q9UV94_9EURO
Length = 905
Score = 165 bits (417), Expect = 2e-39
Identities = 77/152 (50%), Positives = 113/152 (74%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALD+I KRG++ ++ +R++YA++I+ KEFLPH+ E +E RK FF GY+
Sbjct: 120 VIQDREVALDFISKRGSSQTSMNHERRVRYAREIMQKEFLPHISQSEGSETRKAFFLGYM 179
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+HRLL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F R+T++ + +QR ++ +E
Sbjct: 180 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLATLFRTLFTRVTRDLQRYVQRCVETNRE 239
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ L+ G +K+ +T GLK+ LATGNW +KA
Sbjct: 240 IYLNIG-VKASTLTGGLKYALATGNWGEQKKA 270
[179][TOP]
>UniRef100_Q5S3L8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Strobilomyces
floccopus RepID=Q5S3L8_9HOMO
Length = 908
Score = 165 bits (417), Expect = 2e-39
Identities = 79/151 (52%), Positives = 109/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 102 VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 161
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR F+++TK+ +Q+ ++ KE
Sbjct: 162 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFKKLTKDVYRYLQKCVETHKEF 221
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K IT GLK+ LATGNW +K+
Sbjct: 222 NLSLA-VKHQTITNGLKYSLATGNWGDQKKS 251
[180][TOP]
>UniRef100_Q5S2C2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Boletellus
projectellus RepID=Q5S2C2_9HOMO
Length = 899
Score = 165 bits (417), Expect = 2e-39
Identities = 79/151 (52%), Positives = 109/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 111 VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 170
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR F+++TK+ +Q+ ++ KE
Sbjct: 171 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFKKLTKDVYRYLQKCVETHKEF 230
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K IT GLK+ LATGNW +K+
Sbjct: 231 NLSLA-VKHQTITNGLKYSLATGNWGDQKKS 260
[181][TOP]
>UniRef100_Q2ERY8 RNA polymerase II second largest subunit (Fragment) n=1 Tax=Serpula
himantioides RepID=Q2ERY8_9HOMO
Length = 526
Score = 165 bits (417), Expect = 2e-39
Identities = 79/151 (52%), Positives = 109/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 93 VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 152
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR++T++ +Q+ ++ KE
Sbjct: 153 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTRDVYRYLQKCVETHKEF 212
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K IT GLK+ LATGNW +K+
Sbjct: 213 NLSLA-VKHQTITNGLKYSLATGNWGDQKKS 242
[182][TOP]
>UniRef100_Q207G4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Spongipellis
pachyodon RepID=Q207G4_9APHY
Length = 901
Score = 165 bits (417), Expect = 2e-39
Identities = 78/151 (51%), Positives = 109/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T + R +R++YA++IL KE LPH+ + E +E +K +FFGY+I
Sbjct: 106 VIQDREVALDFIGNRGTTTGLNRERRLRYAQEILQKEMLPHISMAEGSESKKAYFFGYMI 165
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ +Q+ ++ KE
Sbjct: 166 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 225
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K + IT GLK+ LATGNW +K+
Sbjct: 226 NLSLA-VKHNTITNGLKYSLATGNWGDQKKS 255
[183][TOP]
>UniRef100_Q1WMR3 DNA-directed RNA polymerase n=1 Tax=Coprinellus disseminatus
RepID=Q1WMR3_COPDI
Length = 1241
Score = 165 bits (417), Expect = 2e-39
Identities = 79/150 (52%), Positives = 108/150 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T ++R +RI+YA++IL KE LPH+ + E +E +K +FFGY+I
Sbjct: 347 VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHISMAEGSESKKAYFFGYMI 406
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ +Q+ ++ KE
Sbjct: 407 HRLLLAALERRELDDRDHFGKKRLDLAGPLLAGLFRMLFRKLTKDVYRYLQKCVETHKEF 466
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRK 450
+L +K IT GLK+ LATGNW +K
Sbjct: 467 NLTLA-VKQQTITNGLKYSLATGNWGDQKK 495
[184][TOP]
>UniRef100_C5DLS0 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS
6340 RepID=C5DLS0_LACTC
Length = 1220
Score = 165 bits (417), Expect = 2e-39
Identities = 81/151 (53%), Positives = 109/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++ ALD+IG+RG + + + KRIQYAKDIL KEFLPH+ E E RK FF GY+I
Sbjct: 318 VIQDRETALDFIGRRGTALGIKKEKRIQYAKDILQKEFLPHITQLEGFESRKAFFLGYMI 377
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
+RLL AL R+ +DDRDH+G KR+DLAGPLLA LF+ FR++T++ MQR+++ K+
Sbjct: 378 NRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFRKLTRDILRFMQRSVEEAKDF 437
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K+ IT GLK+ LATGNW +KA
Sbjct: 438 NLKLA-VKATTITAGLKYALATGNWGEQKKA 467
[185][TOP]
>UniRef100_Q753Q4 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Eremothecium
gossypii RepID=RPB2_ASHGO
Length = 1222
Score = 165 bits (417), Expect = 2e-39
Identities = 81/151 (53%), Positives = 109/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++ ALD+IG+RG + + + KRIQYAKDIL KEFLPH+ E E RK FF GY+I
Sbjct: 318 VIQDRETALDFIGRRGTALGIKKEKRIQYAKDILQKEFLPHITQLEGFESRKAFFLGYMI 377
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
+RLL AL R+ +DDRDH+G KR+DLAGPLLA LF+ FR++T++ MQR+++ K+
Sbjct: 378 NRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFRKLTRDILRFMQRSVEEAKDF 437
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K+ IT GLK+ LATGNW +KA
Sbjct: 438 NLKLA-VKATTITAGLKYALATGNWGEQKKA 467
[186][TOP]
>UniRef100_Q6RYG2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ustilago maydis
RepID=Q6RYG2_USTMA
Length = 887
Score = 164 bits (416), Expect = 2e-39
Identities = 76/151 (50%), Positives = 106/151 (70%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ +DVALD+IG+RG T ++RAKR YA++IL KE LPH+ E + +K +FFGY+I
Sbjct: 118 VIQDRDVALDFIGRRGTTTGLSRAKRTVYAQEILQKEMLPHISTSEGSNTKKAYFFGYMI 177
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DL GPL+A LFR FR++T++ +Q+ ++ +E
Sbjct: 178 HRLLLAALDRREIDDRDHFGKKRIDLGGPLMANLFRMLFRKVTRDVYRHLQKCVEEHREF 237
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ +KS IT GL++ LATGNW +KA
Sbjct: 238 HIQAA-VKSSTITNGLRYSLATGNWGDQKKA 267
[187][TOP]
>UniRef100_Q5S3L7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Suillus pictus
RepID=Q5S3L7_9HOMO
Length = 899
Score = 164 bits (416), Expect = 2e-39
Identities = 79/151 (52%), Positives = 109/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 111 VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMSEGSESKKAYFFGYMI 170
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR F+++T++ +Q+ ++ KE
Sbjct: 171 HRLLLAALERRELDDRDHFGKKRLDLAGPLLAGLFRMLFKKLTRDVYRYLQKCVETHKEF 230
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K IT GLK+ LATGNW +KA
Sbjct: 231 NLSLA-VKHQTITNGLKYSLATGNWGDQKKA 260
[188][TOP]
>UniRef100_A8N2R8 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8N2R8_COPC7
Length = 1222
Score = 164 bits (416), Expect = 2e-39
Identities = 79/151 (52%), Positives = 108/151 (71%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T + R +RI+YA++IL KE LPH+ + E +E +K +FFGY+I
Sbjct: 329 VIQDREVALDFIGNRGTTTGLPRDRRIRYAQEILQKEMLPHISMAEGSESKKAYFFGYMI 388
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ +Q+ ++ KE
Sbjct: 389 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 448
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K IT GLK+ LATGNW +K+
Sbjct: 449 NLSLA-VKHQTITNGLKYSLATGNWGDQKKS 478
[189][TOP]
>UniRef100_B6AET6 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
RepID=B6AET6_9CRYT
Length = 1184
Score = 164 bits (415), Expect = 3e-39
Identities = 80/146 (54%), Positives = 102/146 (69%)
Frame = +1
Query: 10 SQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIHRL 189
SQ+V LD+IGKRG TV R KRIQYA+++L +E LPHVGV E RK +F GY++HRL
Sbjct: 299 SQEVCLDFIGKRGPTVGAIREKRIQYARELLEREVLPHVGVTIGCEFRKAYFIGYMVHRL 358
Query: 190 LRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVSLH 369
ALGR PEDDRDH+G KR+DLAGPL+A F Q FR+M K+ + +QR +D GKE +
Sbjct: 359 CMGALGRVPEDDRDHFGKKRLDLAGPLVAASFGQSFRKMMKDMRRLLQRNIDNGKEFDVA 418
Query: 370 GGHIKSDVITKGLKFPLATGNWSSDR 447
G + IT+ L++ ATGNW DR
Sbjct: 419 GVIRSASYITQTLQYQFATGNWGKDR 444
[190][TOP]
>UniRef100_Q2ERZ0 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Boletinellus merulioides RepID=Q2ERZ0_9HOMO
Length = 315
Score = 164 bits (415), Expect = 3e-39
Identities = 78/151 (51%), Positives = 110/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 113 VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 172
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR F+++T++ +Q+ +++ KE
Sbjct: 173 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFKKLTRDVYRYLQKCVESHKEF 232
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K IT GLK+ LATGNW +K+
Sbjct: 233 NLSLA-VKHQTITNGLKYSLATGNWGDQKKS 262
[191][TOP]
>UniRef100_Q27S79 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Cylindrobasidium evolvens RepID=Q27S79_9HOMO
Length = 763
Score = 164 bits (415), Expect = 3e-39
Identities = 79/151 (52%), Positives = 108/151 (71%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG ++R KRI+YA++IL KE LPH+ + E +E +K +FFGY+I
Sbjct: 89 VIQDREVALDFIGNRGTQTGLSREKRIRYAQEILQKEMLPHISMSEGSESKKAYFFGYMI 148
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR++T++ +Q+ ++ KE
Sbjct: 149 HRLLMAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTRDVYRHLQKCVETRKEF 208
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ G IK IT GLK+ LATGNW +K+
Sbjct: 209 IPNQG-IKHHTITNGLKYSLATGNWGDQKKS 238
[192][TOP]
>UniRef100_Q207H6 RNA polymerase II second largest subunit (Fragment) n=1 Tax=Nia
vibrissa RepID=Q207H6_9AGAR
Length = 524
Score = 164 bits (415), Expect = 3e-39
Identities = 78/151 (51%), Positives = 109/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T ++R +RI+YA++IL KE LPH+ + E +E +K +FFGY++
Sbjct: 97 VIQDREVALDFIGNRGTTTGLSRDRRIRYAQEILQKEMLPHISMTEGSESKKAYFFGYMV 156
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ +Q+ ++ KE
Sbjct: 157 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETRKEF 216
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K IT GLK+ LATGNW +K+
Sbjct: 217 NLSLA-VKHQTITNGLKYSLATGNWGDQKKS 246
[193][TOP]
>UniRef100_B6HM08 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum
Wisconsin 54-1255 RepID=B6HM08_PENCW
Length = 1255
Score = 164 bits (415), Expect = 3e-39
Identities = 79/152 (51%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVA-VTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALD+I KRG++ + + +R++YA+DI+ KE LPH+ E +E RK FF GY+
Sbjct: 341 VIQDREVALDFIAKRGSSQSNLNHDRRVRYARDIMQKELLPHISQNEGSETRKAFFLGYM 400
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+HRLL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F R+TK+ + +QR ++ +E
Sbjct: 401 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLASLFRTLFTRVTKDLQRYVQRCVETNRE 460
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ L+ G IK+ +T GLK+ LATGNW +KA
Sbjct: 461 IYLNIG-IKASTLTGGLKYALATGNWGEQKKA 491
[194][TOP]
>UniRef100_Q6CWA5 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
RepID=Q6CWA5_KLULA
Length = 1221
Score = 164 bits (414), Expect = 4e-39
Identities = 80/151 (52%), Positives = 109/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++ ALD+IG+RG + + + KRIQYAKDIL KEFLPH+ E E RK FF GY+I
Sbjct: 317 VIQDRETALDFIGRRGTALGIKKEKRIQYAKDILQKEFLPHITQLEGFESRKAFFLGYMI 376
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
+RLL AL R+ +DDRDH+G KR+DLAGPLLA LF+ FR++T++ MQR+++ K+
Sbjct: 377 NRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFRKLTRDILRFMQRSVEEAKDF 436
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K+ IT GLK+ LATGNW +K+
Sbjct: 437 NLKLA-VKATTITAGLKYALATGNWGEQKKS 466
[195][TOP]
>UniRef100_Q5S3M4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hygrophoropsis
aurantiaca RepID=Q5S3M4_9HOMO
Length = 863
Score = 164 bits (414), Expect = 4e-39
Identities = 78/151 (51%), Positives = 109/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 67 VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMI 126
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR F+++T++ +Q+ ++ KE
Sbjct: 127 HRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFKKLTRDVYRYLQKCVETHKEF 186
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K IT GLK+ LATGNW +K+
Sbjct: 187 NLSLA-VKHQTITNGLKYSLATGNWGDQKKS 216
[196][TOP]
>UniRef100_Q1DPF0 DNA-directed RNA polymerase n=1 Tax=Coccidioides immitis
RepID=Q1DPF0_COCIM
Length = 1152
Score = 164 bits (414), Expect = 4e-39
Identities = 78/152 (51%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALD+I KRG++ ++ KR++YA+DI+ KEFLPH+ E +E RK FF GY+
Sbjct: 292 VIQDREVALDFISKRGSSPTSMNHEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYM 351
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+H+LL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F R+TK+ +QR ++ ++
Sbjct: 352 VHKLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRVLFMRLTKDLYKYVQRCVETNRQ 411
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ L+ G +K+ +T GLK+ LATGNW +KA
Sbjct: 412 LYLNIG-VKASTLTGGLKYALATGNWGEQKKA 442
[197][TOP]
>UniRef100_C5PAW2 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735
delta SOWgp RepID=C5PAW2_COCP7
Length = 1258
Score = 164 bits (414), Expect = 4e-39
Identities = 78/152 (51%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALD+I KRG++ ++ KR++YA+DI+ KEFLPH+ E +E RK FF GY+
Sbjct: 345 VIQDREVALDFISKRGSSPTSMNHEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYM 404
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+H+LL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F R+TK+ +QR ++ ++
Sbjct: 405 VHKLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRVLFMRLTKDLYKYVQRCVETNRQ 464
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ L+ G +K+ +T GLK+ LATGNW +KA
Sbjct: 465 LYLNIG-VKASTLTGGLKYALATGNWGEQKKA 495
[198][TOP]
>UniRef100_Q9UV79 DNA-directed RNA polymerase (Fragment) n=1 Tax=Peziza quelepidotia
RepID=Q9UV79_9PEZI
Length = 927
Score = 163 bits (413), Expect = 5e-39
Identities = 76/151 (50%), Positives = 111/151 (73%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ +++ALD+IG+RG++ V + KR++YA++IL KEFLPH+ E +E RK FF GY++
Sbjct: 119 VIQKREIALDFIGRRGSSSGVAKDKRVRYAREILQKEFLPHISQKEGSETRKAFFLGYMV 178
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
H++L AL R+ DDRDH+G KR+DLAGPLLA LFR F+++TK+ +Q+ +++ +E
Sbjct: 179 HQMLLCALERKEPDDRDHFGKKRLDLAGPLLAGLFRTLFKKLTKDVYKYLQKCVESSREF 238
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +KS IT GLK+ LATGNW +KA
Sbjct: 239 NLTLA-VKSTTITNGLKYSLATGNWGEQKKA 268
[199][TOP]
>UniRef100_Q6RYI9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Amanita phalloides
RepID=Q6RYI9_AMAPH
Length = 917
Score = 163 bits (413), Expect = 5e-39
Identities = 79/151 (52%), Positives = 108/151 (71%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 118 VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMSEGSESKKAYFFGYMI 177
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ + + ++ KE
Sbjct: 178 HRLLVAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLSKCVETHKEF 237
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K IT GLK+ LATGNW +K+
Sbjct: 238 NL-ALAVKHQTITNGLKYSLATGNWGDQKKS 267
[200][TOP]
>UniRef100_Q5RM00 DNA-directed RNA polymerase (Fragment) n=1 Tax=Fomitiporia
mediterranea RepID=Q5RM00_9HOMO
Length = 898
Score = 163 bits (413), Expect = 5e-39
Identities = 77/151 (50%), Positives = 108/151 (71%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG + R KR++YA++IL KE LPH+ + E +E +K +FFGY+I
Sbjct: 88 VIQDREVALDFIGNRGTATGLNRDKRLRYAQEILQKEMLPHISMAEGSESKKAYFFGYMI 147
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLL LFR FR++TK+ +Q+ ++ KE
Sbjct: 148 HRLLLAALERRELDDRDHFGKKRLDLAGPLLTGLFRMLFRKLTKDVYRYLQKCVETHKEF 207
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+++ IK+ +T GLK+ LATGNW +KA
Sbjct: 208 NINMA-IKTQTLTNGLKYSLATGNWGDQKKA 237
[201][TOP]
>UniRef100_Q207G3 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Steccherinum laeticolor RepID=Q207G3_9APHY
Length = 556
Score = 163 bits (413), Expect = 5e-39
Identities = 78/151 (51%), Positives = 109/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T + R +R++YA++IL KE LPH+ + E +E +K +FFGY+I
Sbjct: 105 VIQDREVALDFIGNRGTTTGLNRERRLRYAQEILQKEMLPHISMKEGSESKKAYFFGYMI 164
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ +Q+ ++ KE
Sbjct: 165 HRLLLAALERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVEMHKEF 224
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K + IT GLK+ LATGNW +K+
Sbjct: 225 NL-ALAVKHNTITNGLKYSLATGNWGDQKKS 254
[202][TOP]
>UniRef100_A2QYC2 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2QYC2_ASPNC
Length = 1256
Score = 163 bits (413), Expect = 5e-39
Identities = 78/152 (51%), Positives = 113/152 (74%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVA-VTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALD+I KRG++ + + +R++YA++I+ KEFLPH+ E +E RK FF GY+
Sbjct: 342 VIQDREVALDFIAKRGSSQSSMNHERRVRYAREIMQKEFLPHISQSEGSETRKAFFLGYM 401
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+HRLL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F R+T++ + +QR ++ +E
Sbjct: 402 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNRE 461
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ L+ G IK+ +T GLK+ LATGNW +KA
Sbjct: 462 IYLNIG-IKASTLTGGLKYALATGNWGEQKKA 492
[203][TOP]
>UniRef100_Q6RYG1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Xanthoria polycarpa
RepID=Q6RYG1_9LECA
Length = 893
Score = 163 bits (412), Expect = 6e-39
Identities = 75/151 (49%), Positives = 112/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
+IQ ++VALD++GKRG ++R +RI++A+D+L KE LPH+ E +E RK FF GY+I
Sbjct: 109 LIQDREVALDFLGKRGKNQKMSRNERIKFARDVLQKELLPHISQTEGSETRKAFFLGYMI 168
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HR+L+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F+++TK+ +Q+ +++ +E
Sbjct: 169 HRMLQCALGRRDVDDRDHFGKKRLDLAGPLLAGLFRMLFQKLTKDIYKYLQKCVESNREF 228
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L G +K + ++ GLK+ LATGNW +KA
Sbjct: 229 NLALG-VKQNTLSSGLKYSLATGNWGDQKKA 258
[204][TOP]
>UniRef100_C4JKI6 DNA-directed RNA polymerase II 138 kDa polypeptide n=1
Tax=Uncinocarpus reesii 1704 RepID=C4JKI6_UNCRE
Length = 884
Score = 163 bits (412), Expect = 6e-39
Identities = 78/152 (51%), Positives = 111/152 (73%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALD+I KRG++ ++ KR++YA+DI+ KEFLPH+ E +E RK FF GY+
Sbjct: 344 VIQDREVALDFISKRGSSPTSMNHEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYM 403
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+H+LL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F R+TK+ +QR ++ ++
Sbjct: 404 VHKLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRVLFMRLTKDLYKYVQRCVETNRQ 463
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ L G +K+ +T GLK+ LATGNW +KA
Sbjct: 464 LYLKIG-VKASTLTGGLKYALATGNWGEQKKA 494
[205][TOP]
>UniRef100_Q9UV97 DNA-directed RNA polymerase (Fragment) n=1 Tax=Chaetomium elatum
RepID=Q9UV97_9PEZI
Length = 934
Score = 162 bits (411), Expect = 8e-39
Identities = 82/151 (54%), Positives = 103/151 (68%), Gaps = 1/151 (0%)
Frame = +1
Query: 4 IQSQDVALDYIGKRGN-TVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
IQ +++ALD+IGKRGN R R++ AKD+L KE LPH+ E E RK FF GY++
Sbjct: 121 IQDREIALDFIGKRGNGNAGQNRMNRVRAAKDLLQKEMLPHISQTEGCETRKAFFLGYMV 180
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR RRMT++ M+R +D K
Sbjct: 181 HRLLQCALGRRDPDDRDHFGKKRLDLAGPLLAKLFRNVIRRMTQDLMSYMKRCIDTNKNF 240
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
SL G IK +T GLK+ LATGNW +KA
Sbjct: 241 SLALG-IKHSTLTNGLKYSLATGNWGDQKKA 270
[206][TOP]
>UniRef100_Q5U7W2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Climacodon
septentrionalis RepID=Q5U7W2_9HOMO
Length = 886
Score = 162 bits (411), Expect = 8e-39
Identities = 77/150 (51%), Positives = 107/150 (71%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ +++ALD+IG RG T + R +R++YA++IL KE LPH+ + E +E +K +FFGY I
Sbjct: 101 VIQDREIALDFIGNRGTTTGLNRERRLRYAQEILQKEMLPHISMAEGSESKKAYFFGYRI 160
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ +Q+ ++ KE
Sbjct: 161 HRLLLAALERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEF 220
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRK 450
+L +K + IT GLK+ LATGNW +K
Sbjct: 221 NLSLA-VKHNTITNGLKYSLATGNWGDQKK 249
[207][TOP]
>UniRef100_Q5C8E1 RNA polymerase II subunit (Fragment) n=1 Tax=Cercophora macrocarpa
RepID=Q5C8E1_9PEZI
Length = 595
Score = 162 bits (411), Expect = 8e-39
Identities = 84/152 (55%), Positives = 106/152 (69%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGN-TVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALD+IGKRGN R+ RI+ AKD+L KE LPH+ E E RK FF GY+
Sbjct: 118 VIQDREVALDFIGKRGNGNAGQNRSNRIRAAKDLLQKEMLPHISQTEGCETRKAFFLGYM 177
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+H+LL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR RRMT++ M+R +D K+
Sbjct: 178 VHKLLQCALGRRDTDDRDHFGKKRLDLAGPLLAKLFRGVVRRMTQDLMSYMKRCIDTNKQ 237
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
SL G IKS +T LK+ LATGNW +KA
Sbjct: 238 FSLALG-IKSCTLTNALKYSLATGNWGDQKKA 268
[208][TOP]
>UniRef100_C5JQR0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis
SLH14081 RepID=C5JQR0_AJEDS
Length = 1258
Score = 162 bits (411), Expect = 8e-39
Identities = 78/152 (51%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALD+I KRG++ ++ KR++YA+DI+ KEFLPH+ E +E RK FF GY+
Sbjct: 344 VIQDREVALDFISKRGSSPTSMNHEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYM 403
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+HRLL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F R+TK+ +QR ++ ++
Sbjct: 404 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRILFMRVTKDLYKYVQRCVETNRQ 463
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ L+ G +K+ ++ GLK+ LATGNW +KA
Sbjct: 464 LYLNIG-VKASTLSGGLKYALATGNWGEQKKA 494
[209][TOP]
>UniRef100_C5GBN2 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis ER-3
RepID=C5GBN2_AJEDR
Length = 1258
Score = 162 bits (411), Expect = 8e-39
Identities = 78/152 (51%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALD+I KRG++ ++ KR++YA+DI+ KEFLPH+ E +E RK FF GY+
Sbjct: 344 VIQDREVALDFISKRGSSPTSMNHEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYM 403
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+HRLL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F R+TK+ +QR ++ ++
Sbjct: 404 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRILFMRVTKDLYKYVQRCVETNRQ 463
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ L+ G +K+ ++ GLK+ LATGNW +KA
Sbjct: 464 LYLNIG-VKASTLSGGLKYALATGNWGEQKKA 494
[210][TOP]
>UniRef100_C4QZQ7 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4QZQ7_PICPG
Length = 1227
Score = 162 bits (411), Expect = 8e-39
Identities = 83/152 (54%), Positives = 110/152 (72%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALD+IG+RG+ + + R KRIQYAKDIL KE LPH+ E E RK FF GY+
Sbjct: 315 VIQDKEVALDFIGRRGSAALGIRREKRIQYAKDILQKELLPHITQEEGFETRKTFFLGYM 374
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
++RLL AL R+ +DDRDH+G KR+DLAGPLLA LFR FR++T+E MQR ++ ++
Sbjct: 375 VNRLLLCALERKDQDDRDHFGKKRLDLAGPLLANLFRILFRKLTREIYRYMQRCIETDRD 434
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L+ +KS IT GLK+ LATGNW +KA
Sbjct: 435 FNLNLA-VKSTTITSGLKYSLATGNWGEQKKA 465
[211][TOP]
>UniRef100_C1H7W3 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb01 RepID=C1H7W3_PARBA
Length = 1258
Score = 162 bits (411), Expect = 8e-39
Identities = 78/152 (51%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALD+I KRG++ ++ KR++YA+DI+ KEFLPH+ E +E RK FF GY+
Sbjct: 344 VIQDREVALDFISKRGSSPTSMNHEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYM 403
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+HRLL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F R+TK+ +QR ++ ++
Sbjct: 404 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRILFMRVTKDLYKYVQRCVETNRQ 463
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ L+ G +K+ ++ GLK+ LATGNW +KA
Sbjct: 464 LYLNIG-VKASTLSGGLKYALATGNWGEQKKA 494
[212][TOP]
>UniRef100_C0S0L5 DNA-directed RNA polymerase n=2 Tax=Paracoccidioides brasiliensis
RepID=C0S0L5_PARBP
Length = 1258
Score = 162 bits (411), Expect = 8e-39
Identities = 78/152 (51%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALD+I KRG++ ++ KR++YA+DI+ KEFLPH+ E +E RK FF GY+
Sbjct: 344 VIQDREVALDFISKRGSSPTSMNHEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYM 403
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+HRLL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F R+TK+ +QR ++ ++
Sbjct: 404 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRILFMRVTKDLYKYVQRCVETNRQ 463
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ L+ G +K+ ++ GLK+ LATGNW +KA
Sbjct: 464 LYLNIG-VKASTLSGGLKYALATGNWGEQKKA 494
[213][TOP]
>UniRef100_C0NB61 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
RepID=C0NB61_AJECG
Length = 1307
Score = 162 bits (411), Expect = 8e-39
Identities = 78/152 (51%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALD+I KRG++ ++ KR++YA+DI+ KEFLPH+ E +E RK FF GY+
Sbjct: 446 VIQDREVALDFISKRGSSPTSMNHEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYM 505
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+HRLL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F R+TK+ +QR ++ ++
Sbjct: 506 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRILFMRVTKDLYKYVQRCVETNRQ 565
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ L+ G +K+ ++ GLK+ LATGNW +KA
Sbjct: 566 LYLNIG-VKASTLSGGLKYALATGNWGEQKKA 596
[214][TOP]
>UniRef100_A6R483 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
RepID=A6R483_AJECN
Length = 1743
Score = 162 bits (411), Expect = 8e-39
Identities = 78/152 (51%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALD+I KRG++ ++ KR++YA+DI+ KEFLPH+ E +E RK FF GY+
Sbjct: 829 VIQDREVALDFISKRGSSPTSMNHEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYM 888
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+HRLL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F R+TK+ +QR ++ ++
Sbjct: 889 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRILFMRVTKDLYKYVQRCVETNRQ 948
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ L+ G +K+ ++ GLK+ LATGNW +KA
Sbjct: 949 LYLNIG-VKASTLSGGLKYALATGNWGEQKKA 979
[215][TOP]
>UniRef100_Q6QJD4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cortinarius iodes
RepID=Q6QJD4_CORIO
Length = 878
Score = 162 bits (410), Expect = 1e-38
Identities = 79/151 (52%), Positives = 108/151 (71%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T ++R +RI+YA++IL KE LPHV + E +E +K FFGY+I
Sbjct: 106 VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVAMKEGSEYQKAHFFGYMI 165
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH+G KR+DLAGPLL+ LFR FR++TK+ +Q+ ++ KE
Sbjct: 166 HRLLLAALERRELDDRDHFGKKRLDLAGPLLSNLFRMLFRKLTKDVYRYLQKCVETHKEF 225
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K IT GLK+ LATGNW +K+
Sbjct: 226 NL-ALAVKHQTITNGLKYSLATGNWGDQKKS 255
[216][TOP]
>UniRef100_Q207G8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phaeolus
schweinitzii RepID=Q207G8_9HOMO
Length = 887
Score = 162 bits (410), Expect = 1e-38
Identities = 74/150 (49%), Positives = 109/150 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T + R +R++YA++IL KE LPH+ + E +E +K +FFGY++
Sbjct: 97 VIQDREVALDFIGNRGTTTGLNRERRLRYAQEILQKEMLPHISMAEGSESKKAYFFGYMV 156
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL A+ R+ DDRDH+G KR+DLAGPLL+ LFR FR++TK+ +Q+ ++ KE
Sbjct: 157 HRLLLAAMEREDLDDRDHFGKKRLDLAGPLLSNLFRMLFRKLTKDVYRYLQKCVETHKEF 216
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRK 450
+L+ +K + IT GLK+ LATGNW ++
Sbjct: 217 NLNLA-VKHNTITNGLKYSLATGNWGDQKR 245
[217][TOP]
>UniRef100_Q5C8E5 RNA polymerase II subunit (Fragment) n=1 Tax=Cercophora
atropurpurea RepID=Q5C8E5_9PEZI
Length = 595
Score = 162 bits (409), Expect = 1e-38
Identities = 82/152 (53%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGN-TVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALDYIGKRGN + R RI+ AKD+L KE LPH+ E E RK FF GY+
Sbjct: 118 VIQDREVALDYIGKRGNGNMGQNRVNRIRAAKDLLQKEMLPHISQSEGCETRKAFFLGYM 177
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+H+LL+ LGR+ DDRDH+G KR+DLAGPLLA LFR RR+T++ M+R +D K+
Sbjct: 178 VHKLLQCVLGRRDTDDRDHFGKKRLDLAGPLLAKLFRGIIRRVTQDLMSYMKRCIDGNKQ 237
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
SL G IK+ +T LK+ LATGNW +KA
Sbjct: 238 FSLALG-IKAGTLTNALKYSLATGNWGDQKKA 268
[218][TOP]
>UniRef100_Q27T04 DNA-directed RNA polymerase (Fragment) n=1 Tax=Vuilleminia comedens
RepID=Q27T04_9HOMO
Length = 880
Score = 162 bits (409), Expect = 1e-38
Identities = 75/150 (50%), Positives = 107/150 (71%)
Frame = +1
Query: 4 IQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIH 183
+Q ++V LDYIG RG T ++R +R+ YA++IL KE LPHV + E +E +K +FFGY+IH
Sbjct: 112 VQDREVCLDYIGNRGTTTGLSRERRLXYAQEILQKEMLPHVSMAEGSESKKAYFFGYMIH 171
Query: 184 RLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVS 363
RLL AL R+ DDRDH+G KR+DLAGPLLA LFR FR++T++ +Q+ ++ KE +
Sbjct: 172 RLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTRDVYRYLQKCVETSKEFN 231
Query: 364 LHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ +K + IT GLK+ LATGNW +K+
Sbjct: 232 ISLA-VKHNTITNGLKYSLATGNWGDQKKS 260
[219][TOP]
>UniRef100_Q207H0 RNA polymerase II second largest subunit (Fragment) n=1 Tax=Irpex
lacteus RepID=Q207H0_IRPLA
Length = 548
Score = 162 bits (409), Expect = 1e-38
Identities = 76/151 (50%), Positives = 108/151 (71%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T + R +R++YA++IL KE LPH+ + E E +K +FFGY+I
Sbjct: 98 VIQDREVALDFIGNRGTTTGLNRERRLRYAQEILQKEMLPHISMAEGAESKKAYFFGYMI 157
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRL+ AL R+ DDRDH+G KR+DLAGPLLA LFR FR++T++ +Q+ ++ KE
Sbjct: 158 HRLMLAALERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTRDVYRYLQKCVETHKEF 217
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K + IT GLK+ LATGNW +K+
Sbjct: 218 NLSLA-VKHNTITNGLKYSLATGNWGDQKKS 247
[220][TOP]
>UniRef100_B8MU25 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC
10500 RepID=B8MU25_TALSN
Length = 1256
Score = 162 bits (409), Expect = 1e-38
Identities = 77/152 (50%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALD+I KRG++ +++ +R++YA++I+ KEFLPH+ E +E RK FF GY+
Sbjct: 342 VIQDREVALDFISKRGSSQTSMSHDRRVRYAREIMQKEFLPHISQSEGSETRKAFFLGYM 401
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+H+LL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F R+T++ +QR ++ +E
Sbjct: 402 VHKLLQCALGRRDVDDRDHFGKKRLDLAGPLLATLFRTLFTRVTRDLTRYVQRCVETNRE 461
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
V L+ G +K +T GLK+ LATGNW +KA
Sbjct: 462 VVLNVG-LKPATLTGGLKYALATGNWGEQKKA 492
[221][TOP]
>UniRef100_B6QUV1 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC
18224 RepID=B6QUV1_PENMQ
Length = 1254
Score = 162 bits (409), Expect = 1e-38
Identities = 77/152 (50%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALD+I KRG++ +++ +R++YA++I+ KEFLPH+ E +E RK FF GY+
Sbjct: 340 VIQDREVALDFISKRGSSQTSMSHDRRVRYAREIMQKEFLPHISQSEGSETRKAFFLGYM 399
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+H+LL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F R+T++ +QR ++ +E
Sbjct: 400 VHKLLQCALGRRDVDDRDHFGKKRLDLAGPLLATLFRTLFTRVTRDLTRYVQRCVETNRE 459
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
V L+ G +K +T GLK+ LATGNW +KA
Sbjct: 460 VVLNVG-LKPATLTGGLKYALATGNWGEQKKA 490
[222][TOP]
>UniRef100_A1YID9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Entophlyctis
confervae-glomeratae RepID=A1YID9_9FUNG
Length = 886
Score = 162 bits (409), Expect = 1e-38
Identities = 80/150 (53%), Positives = 107/150 (71%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG + V++ KRI+YA DIL KE LPHV + ++ RK FFFGY+I
Sbjct: 119 VIQDKEVALDFIGVRGTQMGVSKDKRIRYATDILTKEMLPHVSMESHHQTRKAFFFGYMI 178
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+P DDRDH+G KR+DLAGPLL+ LFR FR++T + ++ ++ G E
Sbjct: 179 HRLLLAALERRPLDDRDHFGRKRLDLAGPLLSSLFRTLFRKLTTDVSRYTKKIVETGGEF 238
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRK 450
+L +KS ITKGL++ LATGNW +K
Sbjct: 239 NL-AMALKSATITKGLQYSLATGNWGDQKK 267
[223][TOP]
>UniRef100_A1YID6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Allomyces macrogynus
RepID=A1YID6_ALLMA
Length = 896
Score = 162 bits (409), Expect = 1e-38
Identities = 76/149 (51%), Positives = 106/149 (71%)
Frame = +1
Query: 4 IQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIH 183
IQ ++VALD+IGKRG + +TR KRI+YA D+L +E LPH+G+ + RK +F GY++H
Sbjct: 112 IQEREVALDFIGKRGRNIGLTRDKRIRYAHDLLERELLPHIGITPGCQTRKSYFIGYMVH 171
Query: 184 RLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVS 363
RLL ALGR+ DDRDH+G KR+DLAGPLLA LFR F+++TK+ ++ G+E +
Sbjct: 172 RLLLAALGRRQVDDRDHFGKKRLDLAGPLLASLFRTFFQKLTKDVSRYFTVCIERGREFN 231
Query: 364 LHGGHIKSDVITKGLKFPLATGNWSSDRK 450
L+ I S+ IT GL++ LATGNW +K
Sbjct: 232 LNMA-INSNTITNGLRYALATGNWGDQKK 259
[224][TOP]
>UniRef100_A1YID5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Allomyces macrogynus
RepID=A1YID5_ALLMA
Length = 867
Score = 161 bits (408), Expect = 2e-38
Identities = 75/149 (50%), Positives = 106/149 (71%)
Frame = +1
Query: 4 IQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIH 183
IQ +++ALD+IGKRG + +TR KRI+YA D+L +E LPH+G+ + RK +F GY++H
Sbjct: 112 IQEREIALDFIGKRGRNIGLTRDKRIRYAHDLLERELLPHIGITPGCQTRKSYFIGYMVH 171
Query: 184 RLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVS 363
RLL ALGR+ DDRDH+G KR+DLAGPLLA LFR F+++TK+ ++ G+E +
Sbjct: 172 RLLLAALGRRQVDDRDHFGKKRLDLAGPLLASLFRTFFQKLTKDVSRYFTVCIERGREFN 231
Query: 364 LHGGHIKSDVITKGLKFPLATGNWSSDRK 450
L+ I S+ IT GL++ LATGNW +K
Sbjct: 232 LNMA-INSNTITNGLRYALATGNWGDQKK 259
[225][TOP]
>UniRef100_Q6FLD5 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Candida
glabrata RepID=RPB2_CANGA
Length = 1223
Score = 161 bits (408), Expect = 2e-38
Identities = 80/151 (52%), Positives = 106/151 (70%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++ ALD+IG+RG + + + KRIQYAKDIL KEFLPH+ E E RK FF GY+I
Sbjct: 321 VIQDRETALDFIGRRGTALGIKKEKRIQYAKDILQKEFLPHITQLEGFESRKAFFLGYMI 380
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
+RLL AL R+ +DDRDH+G KR+DLAGPLLA LF+ FR++TK+ MQR ++ +
Sbjct: 381 NRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFRKLTKDIFRYMQRTVEEANDF 440
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
++ I + IT GLK+ LATGNW +KA
Sbjct: 441 NMKLA-INAKTITSGLKYALATGNWGEQKKA 470
[226][TOP]
>UniRef100_C5LU72 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
RepID=C5LU72_9ALVE
Length = 1171
Score = 161 bits (407), Expect = 2e-38
Identities = 75/148 (50%), Positives = 106/148 (71%)
Frame = +1
Query: 4 IQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIH 183
I SQ+VALD+I KRG T+ +++ RIQYAK++L KE LPH+GV + E RK +F GY++H
Sbjct: 298 IMSQEVALDFIAKRGPTIGTSKSGRIQYAKELLQKELLPHLGVKQYCEPRKAYFIGYMVH 357
Query: 184 RLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVS 363
RLL LGR EDDRDH+G KR+D+AGPL+A F Q FR++ +++K +QR +D+G+
Sbjct: 358 RLLLGQLGRIAEDDRDHFGKKRMDMAGPLMAASFAQLFRKLVQDSKRILQRQVDSGRHFD 417
Query: 364 LHGGHIKSDVITKGLKFPLATGNWSSDR 447
L+ + IT GL++ LATGNW D+
Sbjct: 418 LNSAIRSASSITDGLRYQLATGNWGIDK 445
[227][TOP]
>UniRef100_Q873S8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Stereum hirsutum
RepID=Q873S8_9HOMO
Length = 801
Score = 161 bits (407), Expect = 2e-38
Identities = 73/151 (48%), Positives = 110/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ +++ALD+IG RG T ++R +R++YA++IL KE LPH+ + E +E +K +FFGY+I
Sbjct: 91 VIQDREIALDFIGNRGTTTGLSRERRLRYAQEILQKEMLPHISMSEGSESKKAYFFGYMI 150
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL + R+ DDRDH+G KR+DLAGPLLA LFR FR++T++ +Q+ ++ K+
Sbjct: 151 HRLLLAGMERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTRDVYRYLQKCVETHKDF 210
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L+ +K + IT GLK+ LATGNW +K+
Sbjct: 211 NLNLA-VKHNTITNGLKYSLATGNWGDQKKS 240
[228][TOP]
>UniRef100_Q6QF59 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Heterobasidion annosum RepID=Q6QF59_HETAN
Length = 515
Score = 161 bits (407), Expect = 2e-38
Identities = 74/151 (49%), Positives = 110/151 (72%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T ++R +R++YA++IL KE LPH+ + E +E +K +FFGY+I
Sbjct: 89 VIQDREVALDFIGNRGTTTGLSRDRRVRYAQEILQKEMLPHISMSEGSESKKAYFFGYMI 148
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRL+ A+ R+ DDRDH+G KR+DLAGPLLA LFR FR++T++ +Q+ ++ K+
Sbjct: 149 HRLVLAAMERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTRDVYRYLQKCVETHKDF 208
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K + IT GLK+ LATGNW +K+
Sbjct: 209 NLXLA-VKHNTITNGLKYSLATGNWGDQKKS 238
[229][TOP]
>UniRef100_Q5ARG0 DNA-directed RNA polymerase n=1 Tax=Emericella nidulans
RepID=Q5ARG0_EMENI
Length = 1028
Score = 161 bits (407), Expect = 2e-38
Identities = 75/152 (49%), Positives = 114/152 (75%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVA-VTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALD+I KRG++ + + +R++YA++I+ KE LPH+ E +E RK FF GY+
Sbjct: 116 VIQDREVALDFIAKRGSSQSSMNHERRVRYAREIMQKELLPHISQSEGSETRKAFFLGYM 175
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+HRLL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F R+T++ + +QR +++ +E
Sbjct: 176 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVESDRE 235
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ L+ G +K+ +T+GL++ LATGNW +KA
Sbjct: 236 IYLNVG-LKASTVTQGLRYALATGNWGEQKKA 266
[230][TOP]
>UniRef100_Q0CWW4 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
RepID=Q0CWW4_ASPTN
Length = 1256
Score = 161 bits (407), Expect = 2e-38
Identities = 77/152 (50%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVA-VTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALD+I KRG++ + + +R++YA++I+ KE LPH+ E +E RK FF GY+
Sbjct: 342 VIQDREVALDFIAKRGSSQSSMNHERRVRYAREIMQKELLPHISQSEGSETRKAFFLGYM 401
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+HRLL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F R+T++ + +QR ++ +E
Sbjct: 402 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNRE 461
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ L+ G IK+ +T GLK+ LATGNW +KA
Sbjct: 462 IYLNIG-IKASTLTGGLKYALATGNWGEQKKA 492
[231][TOP]
>UniRef100_C8VK81 DNA-directed RNA polymerase (EC 2.7.7.6)
[Source:UniProtKB/TrEMBL;Acc:Q9UV95] n=2 Tax=Emericella
nidulans RepID=C8VK81_EMENI
Length = 1252
Score = 161 bits (407), Expect = 2e-38
Identities = 75/152 (49%), Positives = 114/152 (75%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVA-VTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALD+I KRG++ + + +R++YA++I+ KE LPH+ E +E RK FF GY+
Sbjct: 340 VIQDREVALDFIAKRGSSQSSMNHERRVRYAREIMQKELLPHISQSEGSETRKAFFLGYM 399
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+HRLL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F R+T++ + +QR +++ +E
Sbjct: 400 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVESDRE 459
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ L+ G +K+ +T+GL++ LATGNW +KA
Sbjct: 460 IYLNVG-LKASTVTQGLRYALATGNWGEQKKA 490
[232][TOP]
>UniRef100_C5DW43 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS
732 RepID=C5DW43_ZYGRC
Length = 1224
Score = 161 bits (407), Expect = 2e-38
Identities = 79/151 (52%), Positives = 107/151 (70%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++ ALD+IG+RG + + + KRIQYA+DIL KEFLPH+ E E RK FF GY+I
Sbjct: 323 VIQDRETALDFIGRRGTALGIKKEKRIQYARDILQKEFLPHITQLEGFESRKAFFLGYMI 382
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
+RLL AL R+ +DDRDH+G KR+DLAGPLLA LF+ FR++T++ MQR ++ K+
Sbjct: 383 NRLLLCALDRRDQDDRDHFGKKRLDLAGPLLAQLFKTLFRKLTRDIFRYMQRTVEEAKDF 442
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
++ I + IT GLK+ LATGNW +KA
Sbjct: 443 NMKLA-INAKTITSGLKYALATGNWGEQKKA 472
[233][TOP]
>UniRef100_B8NK59 DNA-directed RNA polymerase n=2 Tax=Aspergillus RepID=B8NK59_ASPFN
Length = 1254
Score = 161 bits (407), Expect = 2e-38
Identities = 77/152 (50%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVA-VTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALD+I KRG++ + + +R++YA++I+ KE LPH+ E +E RK FF GY+
Sbjct: 341 VIQDREVALDFIAKRGSSQSSMNHERRVRYAREIMQKELLPHISQSEGSETRKAFFLGYM 400
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+HRLL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F R+T++ + +QR ++ +E
Sbjct: 401 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNRE 460
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ L+ G IK+ +T GLK+ LATGNW +KA
Sbjct: 461 IYLNIG-IKASTLTGGLKYALATGNWGEQKKA 491
[234][TOP]
>UniRef100_B0YC08 DNA-directed RNA polymerase n=3 Tax=Aspergillus fumigatus
RepID=B0YC08_ASPFC
Length = 1255
Score = 161 bits (407), Expect = 2e-38
Identities = 77/152 (50%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVA-VTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALD+I KRG++ + + +R++YA++I+ KE LPH+ E +E RK FF GY+
Sbjct: 343 VIQDREVALDFIAKRGSSQSSMNHERRVRYAREIMQKELLPHISQSEGSETRKAFFLGYM 402
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+HRLL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F R+T++ + +QR ++ +E
Sbjct: 403 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNRE 462
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ L+ G IK+ +T GLK+ LATGNW +KA
Sbjct: 463 IYLNIG-IKASTLTGGLKYALATGNWGEQKKA 493
[235][TOP]
>UniRef100_A1D971 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1D971_NEOFI
Length = 1255
Score = 161 bits (407), Expect = 2e-38
Identities = 77/152 (50%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVA-VTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALD+I KRG++ + + +R++YA++I+ KE LPH+ E +E RK FF GY+
Sbjct: 343 VIQDREVALDFIAKRGSSQSSMNHERRVRYAREIMQKELLPHISQSEGSETRKAFFLGYM 402
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+HRLL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F R+T++ + +QR ++ +E
Sbjct: 403 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNRE 462
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ L+ G IK+ +T GLK+ LATGNW +KA
Sbjct: 463 IYLNIG-IKASTLTGGLKYALATGNWGEQKKA 493
[236][TOP]
>UniRef100_A1CG49 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
RepID=A1CG49_ASPCL
Length = 1257
Score = 161 bits (407), Expect = 2e-38
Identities = 77/152 (50%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVA-VTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYV 177
VIQ ++VALD+I KRG++ + + +R++YA++I+ KE LPH+ E +E RK FF GY+
Sbjct: 343 VIQDREVALDFIAKRGSSQSSMNHERRVRYAREIMQKELLPHISQSEGSETRKAFFLGYM 402
Query: 178 IHRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKE 357
+HRLL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR F R+T++ + +QR ++ +E
Sbjct: 403 VHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNRE 462
Query: 358 VSLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+ L+ G IK+ +T GLK+ LATGNW +KA
Sbjct: 463 IYLNIG-IKASTLTGGLKYALATGNWGEQKKA 493
[237][TOP]
>UniRef100_Q5C8C0 RNA polymerase II subunit (Fragment) n=1 Tax=Neurospora pannonica
RepID=Q5C8C0_9PEZI
Length = 597
Score = 160 bits (406), Expect = 3e-38
Identities = 82/151 (54%), Positives = 104/151 (68%), Gaps = 1/151 (0%)
Frame = +1
Query: 4 IQSQDVALDYIGKRGN-TVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
IQ ++VALDYIGKRGN V R RI+ AK++L KE LPH+ E E RK FF GY++
Sbjct: 119 IQDREVALDYIGKRGNGNTGVNRNSRIKAAKEMLQKELLPHISQAEGCETRKAFFLGYMV 178
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
H+LL+ LGR+ DDRDH+G KR+DLAGPLLA LFR RR+T++ M+R +D K
Sbjct: 179 HKLLQCVLGRRDTDDRDHFGKKRLDLAGPLLAKLFRGIVRRLTQDLMGYMKRCVDTNKHF 238
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
SL G IK+ +T GLK+ LATGNW +KA
Sbjct: 239 SLALG-IKASTLTNGLKYSLATGNWGDQKKA 268
[238][TOP]
>UniRef100_Q2GU47 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
RepID=Q2GU47_CHAGB
Length = 1182
Score = 160 bits (406), Expect = 3e-38
Identities = 81/151 (53%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Frame = +1
Query: 4 IQSQDVALDYIGKRGN-TVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
IQ +++ALD+IGKRGN R R++ AKD+L KE LPH+ E E RK FF GY++
Sbjct: 307 IQDREIALDFIGKRGNGNAGQNRMNRVRAAKDLLQKEMLPHISQTEGCETRKAFFLGYMV 366
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL+ ALGR+ DDRDH+G KR+DL GPLLA LFR RRMT++ M+R +D K
Sbjct: 367 HRLLQCALGRRDPDDRDHFGKKRLDLPGPLLAKLFRNVIRRMTQDLMSYMKRCIDTNKNF 426
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
SL G IK +T GLK+ LATGNW +KA
Sbjct: 427 SLPLG-IKHSTLTNGLKYSLATGNWGDQKKA 456
[239][TOP]
>UniRef100_B6RQS5 RNA polymerase II subunit 2 (Fragment) n=1 Tax=Agaricus sp. JB-101
RepID=B6RQS5_9AGAR
Length = 410
Score = 160 bits (406), Expect = 3e-38
Identities = 77/147 (52%), Positives = 106/147 (72%)
Frame = +1
Query: 13 QDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIHRLL 192
++VALD+IG RG T ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+IHRLL
Sbjct: 1 REVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMIHRLL 60
Query: 193 RVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVSLHG 372
AL R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ +Q+ ++ KE +L
Sbjct: 61 LAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEFNL-A 119
Query: 373 GHIKSDVITKGLKFPLATGNWSSDRKA 453
+K IT GLK+ LATGNW +K+
Sbjct: 120 LAVKHQTITNGLKYSLATGNWGDQKKS 146
[240][TOP]
>UniRef100_B6RQS4 RNA polymerase II subunit 2 (Fragment) n=1 Tax=Agaricus sp. JB-101
RepID=B6RQS4_9AGAR
Length = 368
Score = 160 bits (406), Expect = 3e-38
Identities = 77/147 (52%), Positives = 106/147 (72%)
Frame = +1
Query: 13 QDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIHRLL 192
++VALD+IG RG T ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+IHRLL
Sbjct: 1 REVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSESKKAYFFGYMIHRLL 60
Query: 193 RVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVSLHG 372
AL R+ DDRDH+G KR+DLAGPLLA LFR FR++TK+ +Q+ ++ KE +L
Sbjct: 61 LAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQKCVETHKEFNL-A 119
Query: 373 GHIKSDVITKGLKFPLATGNWSSDRKA 453
+K IT GLK+ LATGNW +K+
Sbjct: 120 LAVKHQTITNGLKYSLATGNWGDQKKS 146
[241][TOP]
>UniRef100_Q5U7W5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Armillaria mellea
RepID=Q5U7W5_ARMME
Length = 884
Score = 160 bits (405), Expect = 4e-38
Identities = 77/151 (50%), Positives = 106/151 (70%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IG RG T ++R +RI+YA++IL KE LPHV + E +E +K +FFGY+I
Sbjct: 111 VIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMSEGSESKKAYFFGYMI 170
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
HRLL AL R+ DDRDH G R+DLAGPLLA LFR FR+ ++ +Q+ ++ KE
Sbjct: 171 HRLLLAALERRELDDRDHLGKNRLDLAGPLLANLFRMLFRKFNRDVYRYLQKCVETHKEF 230
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
++ G +K IT GLK+ LATGNW +K+
Sbjct: 231 NVSVG-VKHQTITNGLKYSLATGNWGDQKKS 260
[242][TOP]
>UniRef100_Q9UV99 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neurospora crassa
RepID=Q9UV99_NEUCR
Length = 903
Score = 160 bits (404), Expect = 5e-38
Identities = 81/151 (53%), Positives = 105/151 (69%), Gaps = 1/151 (0%)
Frame = +1
Query: 4 IQSQDVALDYIGKRGN-TVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
IQ ++VALDYIGKRGN + + R RI+ AK++L KE LPH+ E E RK FF GY++
Sbjct: 121 IQDREVALDYIGKRGNGSTGINRNGRIKAAKEMLQKELLPHISQAEGCETRKAFFLGYMV 180
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
H+LL+ LGR+ DDRDH+G KR+DLAGPLLA LFR RR+T++ M+R +D K
Sbjct: 181 HKLLQCVLGRRDTDDRDHFGKKRLDLAGPLLAKLFRGIVRRLTQDLMGYMKRCVDTNKHF 240
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
SL G IK+ +T GLK+ LATGNW +KA
Sbjct: 241 SLALG-IKASTLTNGLKYSLATGNWGDQKKA 270
[243][TOP]
>UniRef100_Q9UV88 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dothidea insculpta
RepID=Q9UV88_9PEZI
Length = 936
Score = 160 bits (404), Expect = 5e-38
Identities = 76/151 (50%), Positives = 112/151 (74%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++VALD+IGKRG + TR RI+YA+D++ KEFLPH+ E +E RK FF GY+I
Sbjct: 119 VIQDREVALDFIGKRGQQMG-TREXRIRYARDVMQKEFLPHISQKEGSETRKAFFLGYMI 177
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
+RLL+ ALGR EDDRDH+G KR+DLAGPL+A +FR F ++ ++ ++ + R ++ GKE
Sbjct: 178 NRLLQCALGRVEEDDRDHFGKKRLDLAGPLMAQVFRLKFTQLIRDTRVYLSRCVEGGKEF 237
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
+L +K+++++ GL++ LATGNW +KA
Sbjct: 238 NLTLA-VKANILSSGLRYCLATGNWGDQKKA 267
[244][TOP]
>UniRef100_Q872W7 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
RepID=Q872W7_NEUCR
Length = 1287
Score = 160 bits (404), Expect = 5e-38
Identities = 81/151 (53%), Positives = 105/151 (69%), Gaps = 1/151 (0%)
Frame = +1
Query: 4 IQSQDVALDYIGKRGN-TVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
IQ ++VALDYIGKRGN + + R RI+ AK++L KE LPH+ E E RK FF GY++
Sbjct: 376 IQDREVALDYIGKRGNGSTGINRNGRIKAAKEMLQKELLPHISQAEGCETRKAFFLGYMV 435
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
H+LL+ LGR+ DDRDH+G KR+DLAGPLLA LFR RR+T++ M+R +D K
Sbjct: 436 HKLLQCVLGRRDTDDRDHFGKKRLDLAGPLLAKLFRGIVRRLTQDLMGYMKRCVDTNKHF 495
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
SL G IK+ +T GLK+ LATGNW +KA
Sbjct: 496 SLALG-IKASTLTNGLKYSLATGNWGDQKKA 525
[245][TOP]
>UniRef100_Q7RYF4 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
RepID=Q7RYF4_NEUCR
Length = 1005
Score = 160 bits (404), Expect = 5e-38
Identities = 81/151 (53%), Positives = 105/151 (69%), Gaps = 1/151 (0%)
Frame = +1
Query: 4 IQSQDVALDYIGKRGN-TVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
IQ ++VALDYIGKRGN + + R RI+ AK++L KE LPH+ E E RK FF GY++
Sbjct: 140 IQDREVALDYIGKRGNGSTGINRNGRIKAAKEMLQKELLPHISQAEGCETRKAFFLGYMV 199
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
H+LL+ LGR+ DDRDH+G KR+DLAGPLLA LFR RR+T++ M+R +D K
Sbjct: 200 HKLLQCVLGRRDTDDRDHFGKKRLDLAGPLLAKLFRGIVRRLTQDLMGYMKRCVDTNKHF 259
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
SL G IK+ +T GLK+ LATGNW +KA
Sbjct: 260 SLALG-IKASTLTNGLKYSLATGNWGDQKKA 289
[246][TOP]
>UniRef100_Q5C8D2 RNA polymerase II subunit (Fragment) n=1 Tax=Zignoella ovoidea
RepID=Q5C8D2_9PEZI
Length = 595
Score = 160 bits (404), Expect = 5e-38
Identities = 79/150 (52%), Positives = 104/150 (69%)
Frame = +1
Query: 4 IQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIH 183
IQ ++VALD+IGKRGNT + R RI+ A+D+L KE LPH+ E E RK FF GY++H
Sbjct: 119 IQDREVALDFIGKRGNTHGLARGNRIKAARDVLQKEMLPHISQSEGCETRKAFFLGYMVH 178
Query: 184 RLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVS 363
+LL+ ALGR+ DDRDH+G KR+DLAGPLLA LFR R+MT + + ++R ++ K S
Sbjct: 179 KLLQCALGRRDTDDRDHFGKKRLDLAGPLLAKLFRGIVRKMTTDLQAYVKRCVNENKHFS 238
Query: 364 LHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
L G IK +T LK+ LATGNW +KA
Sbjct: 239 LALG-IKPSQLTNALKYSLATGNWGDQKKA 267
[247][TOP]
>UniRef100_Q5C8C8 RNA polymerase II subunit (Fragment) n=1 Tax=Gelasinospora
tetrasperma RepID=Q5C8C8_9PEZI
Length = 590
Score = 160 bits (404), Expect = 5e-38
Identities = 82/151 (54%), Positives = 104/151 (68%), Gaps = 1/151 (0%)
Frame = +1
Query: 4 IQSQDVALDYIGKRGNT-VAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
IQ ++VALDYIGKRGN V R RI+ AK++L KE LPH+ E E RK FF GY++
Sbjct: 112 IQDREVALDYIGKRGNGHTGVNRNSRIKAAKEMLQKELLPHISQAEGCETRKAFFLGYMV 171
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
H+LL+ LGR+ DDRDH+G KR+DLAGPLLA LFR RR+T++ M+R +D K
Sbjct: 172 HKLLQCVLGRRDTDDRDHFGKKRLDLAGPLLAKLFRGIVRRLTQDLMGYMKRCVDTNKHF 231
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
SL G IK+ +T GLK+ LATGNW +KA
Sbjct: 232 SLALG-IKASTLTNGLKYSLATGNWGDQKKA 261
[248][TOP]
>UniRef100_Q5C8C5 RNA polymerase II subunit (Fragment) n=1 Tax=Lasiosphaeria hispida
RepID=Q5C8C5_9PEZI
Length = 600
Score = 160 bits (404), Expect = 5e-38
Identities = 81/151 (53%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Frame = +1
Query: 4 IQSQDVALDYIGKRGN-TVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
IQ +++ALDYIGKRGN R RI+ AKD+L KE LPH+ E E RK FF GY++
Sbjct: 119 IQDREIALDYIGKRGNGNTGQNRMNRIRAAKDLLQKEMLPHISQTEGCETRKAFFLGYMV 178
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
H+LL+ LGR+ DDRDH+G KR+DLAGPL+A LFR RR+T+E M+R +D K
Sbjct: 179 HKLLQCVLGRRDTDDRDHFGKKRLDLAGPLMAKLFRGLVRRITQELMQHMKRCIDGNKHF 238
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
SL G IK +T GLK+ LATGNW +KA
Sbjct: 239 SLALG-IKPGTLTNGLKYSLATGNWGDQKKA 268
[249][TOP]
>UniRef100_Q207G1 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Gloeocystidiellum porosum RepID=Q207G1_9HOMO
Length = 429
Score = 160 bits (404), Expect = 5e-38
Identities = 74/145 (51%), Positives = 108/145 (74%)
Frame = +1
Query: 19 VALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVIHRLLRV 198
+ALD+IG RG TV ++R +R++YA++IL KE LPH+ + E +E +K +FFGY+IHRLL
Sbjct: 1 IALDFIGNRGTTVGLSRERRLRYAQEILQKEMLPHISMSEGSESKKAYFFGYMIHRLLLA 60
Query: 199 ALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEVSLHGGH 378
A+ R+ DDRDH+G KR+DLAGPLLA LFR FR++T++ +Q+ +++ KE +L+
Sbjct: 61 AMERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTRDVYRYLQKCVESHKEFNLNLA- 119
Query: 379 IKSDVITKGLKFPLATGNWSSDRKA 453
IK + IT GLK+ LATGNW +K+
Sbjct: 120 IKHNTITNGLKYSLATGNWGDQKKS 144
[250][TOP]
>UniRef100_P08518 DNA-directed RNA polymerase II subunit RPB2 n=4 Tax=Saccharomyces
cerevisiae RepID=RPB2_YEAST
Length = 1224
Score = 160 bits (404), Expect = 5e-38
Identities = 79/151 (52%), Positives = 106/151 (70%)
Frame = +1
Query: 1 VIQSQDVALDYIGKRGNTVAVTRAKRIQYAKDILNKEFLPHVGVGESNELRKGFFFGYVI 180
VIQ ++ ALD+IG+RG + + + KRIQYAKDIL KEFLPH+ E E RK FF GY+I
Sbjct: 323 VIQDRETALDFIGRRGTALGIKKEKRIQYAKDILQKEFLPHITQLEGFESRKAFFLGYMI 382
Query: 181 HRLLRVALGRQPEDDRDHYGNKRVDLAGPLLALLFRQCFRRMTKEAKMSMQRAMDAGKEV 360
+RLL AL R+ +DDRDH+G KR+DLAGPLLA LF+ F+++TK+ MQR ++ +
Sbjct: 383 NRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFKKLTKDIFRYMQRTVEEAHDF 442
Query: 361 SLHGGHIKSDVITKGLKFPLATGNWSSDRKA 453
++ I + IT GLK+ LATGNW +KA
Sbjct: 443 NMKLA-INAKTITSGLKYALATGNWGEQKKA 472