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[1][TOP]
>UniRef100_O04142 DNA-directed RNA polymerase (Fragment) n=1 Tax=Porphyra yezoensis
            RepID=O04142_PORYE
          Length = 1685

 Score =  246 bits (629), Expect = 5e-64
 Identities = 138/181 (76%), Positives = 143/181 (79%), Gaps = 6/181 (3%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED
Sbjct: 742  EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 801

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSG----G 350
            GLDGALVEDQKL TLRSTNDSFTKRYHLTEPDLHLQ       L          G    G
Sbjct: 802  GLDGALVEDQKLDTLRSTNDSFTKRYHLTEPDLHLQGVVQFSVLVAGGSQRYPLGRRRRG 861

Query: 351  DVTELL--AKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSD 524
             V++ +  A+E  +L   R       FKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSD
Sbjct: 862  AVSQGVGTAEEGPRLPTPRG------FKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSD 915

Query: 525  L 527
            L
Sbjct: 916  L 916

[2][TOP]
>UniRef100_Q9AXN0 DNA-directed RNA polymerase n=1 Tax=Glaucosphaera vacuolata
            RepID=Q9AXN0_9RHOD
          Length = 1746

 Score =  205 bits (522), Expect = 1e-51
 Identities = 102/176 (57%), Positives = 131/176 (74%), Gaps = 1/176 (0%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRL+KA+EDVMVKYDGTVRNS   ++QFLYGED
Sbjct: 800  EFFFHAMGGREGLIDTAVKTSETGYIQRRLIKALEDVMVKYDGTVRNSTGLIVQFLYGED 859

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSN-SPYLSQAALNDIHSGGDVT 359
            G+DGA+VEDQ L TL   +    + +HL   DL      N   YL+Q  ++D+ +   + 
Sbjct: 860  GMDGAMVEDQNLRTLSMNDAKLEQTFHLDPFDLDFGIGENRRSYLAQEVIDDVRNDPQLI 919

Query: 360  ELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            + L  E+AQ+K DRD L+ E+ ++ E+K PLAVNI+RLIWN K +F++RQ+  SDL
Sbjct: 920  KALEDEFAQIKLDRDRLQREIIRSRESKWPLAVNIDRLIWNVKTLFNIRQDSVSDL 975

[3][TOP]
>UniRef100_Q9AXN1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Botryocladia
            uvarioides RepID=Q9AXN1_9FLOR
          Length = 1712

 Score =  197 bits (501), Expect = 4e-49
 Identities = 98/176 (55%), Positives = 128/176 (72%), Gaps = 1/176 (0%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAMEDVMV+YDGTVRNS + V++FLYGED
Sbjct: 725  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEDVMVRYDGTVRNSANHVVEFLYGED 784

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHL-QESSNSPYLSQAALNDIHSGGDVT 359
            G+D  L+EDQ L TL+ +++     Y+L   D    ++S   PYL     + I       
Sbjct: 785  GMDATLLEDQTLRTLKMSDERLFDEYYLDPTDAKFGKDSRGRPYLDWETCDSIRQDAQAH 844

Query: 360  ELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             LL  E+ ++++DRD LR+ + K+GEAK P+AVNI+R+IWNAK+  ++R +  SDL
Sbjct: 845  ILLRNEFQRIREDRDLLRNFIAKSGEAKRPMAVNIDRIIWNAKQAHNIRPDSVSDL 900

[4][TOP]
>UniRef100_C1EA31 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
            RepID=C1EA31_9CHLO
          Length = 1720

 Score =  185 bits (469), Expect = 2e-45
 Identities = 93/162 (57%), Positives = 120/162 (74%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMED++VKYDGTVRNS   VIQFLYGED
Sbjct: 807  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIIVKYDGTVRNSAGDVIQFLYGED 866

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   VE QK+ TLR + + F KR+H+ +PD   +      ++S+A +ND+ +  +   
Sbjct: 867  GMDATYVESQKIDTLRDSREKFRKRFHM-DPD---EPGFGRGWMSEAQVNDLANSAEKRA 922

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAK 488
            LL +EW +L KDR+ LR     TG+  + L VN++R+IWNA+
Sbjct: 923  LLEEEWERLLKDREELR-RTMSTGDQNVHLPVNLKRIIWNAQ 963

[5][TOP]
>UniRef100_A9QMT2 RNA polymerase 2 (Fragment) n=1 Tax=Pellioditis typica
           RepID=A9QMT2_9PELO
          Length = 488

 Score =  185 bits (469), Expect = 2e-45
 Identities = 96/175 (54%), Positives = 123/175 (70%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + +IQ  YGED
Sbjct: 26  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMIQLRYGED 85

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q L T++ TN  F K + L   D    E + + Y ++  + ++    +  +
Sbjct: 86  GLDGMWVENQNLPTMKPTNALFEKEFKLDLSD----EKTLTKYYTEDVVRELQGSSESLK 141

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            + KEWAQL++DR  LR ++F TG AK+ L  N++RLIWNA++IF V     +DL
Sbjct: 142 EVEKEWAQLEEDRRLLR-KIFPTGNAKIVLPCNLQRLIWNAQKIFHVETRKPTDL 195

[6][TOP]
>UniRef100_A9QME0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pellioditis typica
           RepID=A9QME0_9PELO
          Length = 633

 Score =  185 bits (469), Expect = 2e-45
 Identities = 96/175 (54%), Positives = 123/175 (70%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + +IQ  YGED
Sbjct: 40  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMIQLRYGED 99

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q L T++ TN  F K + L   D    E + + Y ++  + ++    +  +
Sbjct: 100 GLDGMWVENQNLPTMKPTNALFEKEFKLDLSD----EKTLTKYYTEDVVRELQGSSESLK 155

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            + KEWAQL++DR  LR ++F TG AK+ L  N++RLIWNA++IF V     +DL
Sbjct: 156 EVEKEWAQLEEDRRLLR-KIFPTGNAKIVLPCNLQRLIWNAQKIFHVETRKPTDL 209

[7][TOP]
>UniRef100_C1MI48 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
            RepID=C1MI48_9CHLO
          Length = 1694

 Score =  182 bits (462), Expect = 1e-44
 Identities = 93/163 (57%), Positives = 119/163 (73%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMED++VKYDGTVRNS   VIQFLYGED
Sbjct: 810  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIIVKYDGTVRNSAGDVIQFLYGED 869

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   VE QK+ TLR   + F + +HL +PD   + +    ++S+A  ND+ +  +   
Sbjct: 870  GMDATYVESQKIDTLRHDKEKFKRTFHL-DPD---EPNFGKGWMSEAQANDLANSVEKRA 925

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKR 491
            LL  EW QLK DR  L H+V  TG+  + L VN++R++WNA++
Sbjct: 926  LLEAEWEQLKLDRAEL-HKVMTTGDPSVHLPVNLKRIVWNAQK 967

[8][TOP]
>UniRef100_O01364 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cruznema tripartitum
           RepID=O01364_9BILA
          Length = 633

 Score =  181 bits (459), Expect = 3e-44
 Identities = 93/175 (53%), Positives = 120/175 (68%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   ++Q  YGED
Sbjct: 40  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSIGQMVQLRYGED 99

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q L T++ TN  F K + L   D    E +   + ++  + D+    +   
Sbjct: 100 GLDGMWVENQNLPTMKPTNAVFEKEFKLDLAD----EKTLRRFYTEDVVRDLQGSSEALR 155

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +  EWAQL++DR  LR ++F TG+AK+ L  N++RL+WNA++IF V     +DL
Sbjct: 156 EVESEWAQLEEDRRLLR-KIFPTGDAKIVLPCNLKRLLWNAQKIFHVEMRKPTDL 209

[9][TOP]
>UniRef100_A9QMQ5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cruznema tripartitum
           RepID=A9QMQ5_9BILA
          Length = 276

 Score =  181 bits (459), Expect = 3e-44
 Identities = 93/175 (53%), Positives = 120/175 (68%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   ++Q  YGED
Sbjct: 33  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSIGQMVQLRYGED 92

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q L T++ TN  F K + L   D    E +   + ++  + D+    +   
Sbjct: 93  GLDGMWVENQNLPTMKPTNAVFEKEFKLDLAD----EKTLRRFYTEDVVRDLQGSSEALR 148

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +  EWAQL++DR  LR ++F TG+AK+ L  N++RL+WNA++IF V     +DL
Sbjct: 149 EVESEWAQLEEDRRLLR-KIFPTGDAKIVLPCNLKRLLWNAQKIFHVEMRKPTDL 202

[10][TOP]
>UniRef100_Q6E228 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhabditella axei
           RepID=Q6E228_9BILA
          Length = 621

 Score =  181 bits (458), Expect = 4e-44
 Identities = 93/175 (53%), Positives = 121/175 (69%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + +IQ  YGED
Sbjct: 44  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMIQLRYGED 103

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + T++ TN  F K + L   D    E +   + ++  + D+    +  +
Sbjct: 104 GLDGMWVENQNMPTMKPTNAMFEKEFKLDLTD----EKTLRKFYTEEVVRDLQGSTEAMK 159

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +  EW QL++DR  LR ++F TG+AK+ L  N++RLIWNA++IF V     +DL
Sbjct: 160 EVESEWHQLEEDRRLLR-KIFPTGDAKIVLPCNLQRLIWNAQKIFHVETRKPTDL 213

[11][TOP]
>UniRef100_A9QMH0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Panagrellus
           redivivus RepID=A9QMH0_PANRE
          Length = 636

 Score =  180 bits (456), Expect = 6e-44
 Identities = 96/167 (57%), Positives = 116/167 (69%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 45  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQVRYGED 104

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE Q L T++ TN  F K+YHL   D    +   S   S   + ++ +  +V E
Sbjct: 105 GLDGMWVESQTLPTMKLTNSLFEKKYHLNIHD----DKEMSRLYSVDVIRELRNDPEVQE 160

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDV 503
            L +EW +L +DR  LR E+F  G+AK  L  N++RLIWNA++IF V
Sbjct: 161 KLEQEWRKLCEDRAMLR-EIFPKGDAKTVLPCNLQRLIWNAQKIFHV 206

[12][TOP]
>UniRef100_Q6CBQ3 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
            RepID=Q6CBQ3_YARLI
          Length = 1750

 Score =  180 bits (456), Expect = 6e-44
 Identities = 99/175 (56%), Positives = 123/175 (70%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQRRLVKA+EDVMV+YDGTVRNS   VIQF+YGED
Sbjct: 817  EFFFHAMAGREGLIDTAVKTAETGYIQRRLVKALEDVMVQYDGTVRNSLGDVIQFVYGED 876

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDGA VE Q + T+  +++SF +RY      + L      P L+  + NDI    +V  
Sbjct: 877  GLDGAQVEKQTVDTIPGSDESFERRY-----KIDLMNPKTKP-LNIESGNDIVGDVEVQR 930

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +L +E+ QL  DR  LR EVF  G+   PL VNI R++ N++RIF+V ++  SDL
Sbjct: 931  VLDEEYNQLLTDRRLLREEVFTNGDHNWPLPVNIRRVVQNSQRIFNVDKSKVSDL 985

[13][TOP]
>UniRef100_Q2PYQ9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Endogone pisiformis
            RepID=Q2PYQ9_9FUNG
          Length = 845

 Score =  180 bits (456), Expect = 6e-44
 Identities = 99/175 (56%), Positives = 117/175 (66%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKA+EDVMVKYDGTVRNS   VIQF YGED
Sbjct: 582  EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDVMVKYDGTVRNSLGDVIQFCYGED 641

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   VE QKL +L      F +RY L    L+ +       L       I    DV  
Sbjct: 642  GMDACFVERQKLHSLDCKQTDFERRYRLDV--LNTKGGLKPNTLEFDVQRQIEGNEDVQG 699

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            LL +E+ QL++DRD L   +FKTG+ K PL  N++RLI NA++IF + +   SDL
Sbjct: 700  LLDEEFQQLQEDRDTLSKFIFKTGDGKWPLPTNLQRLITNAQQIFHIDRRKPSDL 754

[14][TOP]
>UniRef100_A9QMF8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhabditis sp. SB347
           RepID=A9QMF8_9BILA
          Length = 621

 Score =  179 bits (455), Expect = 8e-44
 Identities = 94/175 (53%), Positives = 118/175 (67%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 44  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLGQMIQLRYGED 103

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + T++ TN  F K + L   D    E S     ++  + ++    D  +
Sbjct: 104 GLDGMWVENQNMPTMKPTNALFEKEFKLELTD----EKSLRTLYTEDVVRELQGSSDALK 159

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
               EW QL++DR  LR ++F TG+AK+ L  N++RLIWNA++IF V     +DL
Sbjct: 160 EAEAEWGQLEEDRRLLR-KIFPTGDAKIVLPCNLQRLIWNAQKIFHVETRKPTDL 213

[15][TOP]
>UniRef100_A9QME8 RNA polymerase 2 (Fragment) n=1 Tax=Choriorhabditis dudichi
           RepID=A9QME8_9BILA
          Length = 252

 Score =  179 bits (454), Expect = 1e-43
 Identities = 93/175 (53%), Positives = 118/175 (67%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + +IQ  YGED
Sbjct: 13  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMIQLRYGED 72

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + T++ T+  F K + L   D    E     Y     + D+    +   
Sbjct: 73  GLDGMWVENQNMPTMKPTHLLFEKDFKLDLSD----EKMLKKYYKDEVVRDLQGSSEALN 128

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            + +EW QL++DR  LR ++F TG+AK+ L  N++RLIWNA++IF V     +DL
Sbjct: 129 EVEEEWRQLEEDRRLLR-KIFPTGDAKIVLPCNLQRLIWNAQKIFHVHMRQTTDL 182

[16][TOP]
>UniRef100_Q1E2G9 DNA-directed RNA polymerase n=1 Tax=Coccidioides immitis
            RepID=Q1E2G9_COCIM
          Length = 1750

 Score =  179 bits (454), Expect = 1e-43
 Identities = 97/175 (55%), Positives = 125/175 (71%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQR+LVKA+E+VMVKYDGTVRNS   VIQFLYGED
Sbjct: 835  EFFFHAMAGREGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDVIQFLYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDGA +E+Q++  +R +++ F  R+ +   DL   E+S SP L + A  +I    +V  
Sbjct: 895  GLDGAFIENQRVDVIRCSDEQFRNRFRI---DLMDPENSLSPELLEQA-TEITGDMEVQR 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +EW QL+KDR FLR  V K  E  + L +N++R++ +AK  F +R+   SDL
Sbjct: 951  YLDEEWEQLQKDRAFLR-SVAKEDEEMMQLPINVQRILESAKTTFRIREGTISDL 1004

[17][TOP]
>UniRef100_A9QMP1 RNA polymerase 2 (Fragment) n=1 Tax=Pellioditis mediterranea
           RepID=A9QMP1_9PELO
          Length = 276

 Score =  179 bits (453), Expect = 1e-43
 Identities = 92/175 (52%), Positives = 120/175 (68%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + +IQ  YGED
Sbjct: 27  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMIQLRYGED 86

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + T++ TN  F K + L   D  +   +     ++  + D+    +  +
Sbjct: 87  GLDGMWVENQNMPTMKPTNALFEKDFKLDITDEKMMRKN----YTEDVIRDLQGSSEALK 142

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            + +EW QL+ DR  LR ++F TG+AK+ L  N++RLIWNA++IF V     +DL
Sbjct: 143 QIEEEWHQLEHDRRLLR-KIFPTGDAKIVLPCNLQRLIWNAQKIFHVETRKPTDL 196

[18][TOP]
>UniRef100_A9QME7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pellioditis
           mediterranea RepID=A9QME7_9PELO
          Length = 618

 Score =  179 bits (453), Expect = 1e-43
 Identities = 92/175 (52%), Positives = 120/175 (68%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + +IQ  YGED
Sbjct: 41  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMIQLRYGED 100

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + T++ TN  F K + L   D  +   +     ++  + D+    +  +
Sbjct: 101 GLDGMWVENQNMPTMKPTNALFEKDFKLDITDEKMMRKN----YTEDVIRDLQGSSEALK 156

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            + +EW QL+ DR  LR ++F TG+AK+ L  N++RLIWNA++IF V     +DL
Sbjct: 157 QIEEEWHQLEHDRRLLR-KIFPTGDAKIVLPCNLQRLIWNAQKIFHVETRKPTDL 210

[19][TOP]
>UniRef100_O02452 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mastigoproctus
           giganteus RepID=O02452_MASGI
          Length = 887

 Score =  178 bits (452), Expect = 2e-43
 Identities = 95/176 (53%), Positives = 119/176 (67%), Gaps = 1/176 (0%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VM  YDGT+RNS   VIQ  YGED
Sbjct: 474 EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMATYDGTIRNSTGQVIQLRYGED 533

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHL-TEPDLHLQESSNSPYLSQAALNDIHSGGDVT 359
           GLDG+ VE Q L TL+ +N +F KR+      + HL+        ++  + D+       
Sbjct: 534 GLDGSAVEFQSLPTLKPSNKAFEKRFRFDAANERHLRR-----IFTEDVVRDLLGSATAL 588

Query: 360 ELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L KEW +LKKDR+ LR  VF TG++K+ L  N++R+IWNA++IF V     +DL
Sbjct: 589 SELEKEWERLKKDREVLR-TVFPTGDSKVVLPCNLQRMIWNAQKIFRVNARAPTDL 643

[20][TOP]
>UniRef100_C5PAJ4 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735 delta
            SOWgp RepID=C5PAJ4_COCP7
          Length = 1746

 Score =  178 bits (452), Expect = 2e-43
 Identities = 97/175 (55%), Positives = 125/175 (71%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQR+LVKA+E+VMVKYDGTVRNS   VIQFLYGED
Sbjct: 835  EFFFHAMAGREGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDVIQFLYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDGA +E+Q++  +R +++ F  R+ +   DL   E+S SP L + A  +I    +V  
Sbjct: 895  GLDGAFIENQRVDVIRCSDELFRNRFRI---DLMDPENSLSPELLEQA-TEITGDMEVQR 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +EW QL+KDR FLR  V K  E  + L +N++R++ +AK  F +R+   SDL
Sbjct: 951  YLDEEWEQLQKDRAFLR-SVAKEDEEMMQLPINVQRILESAKTTFRIREGTISDL 1004

[21][TOP]
>UniRef100_B4YT42 DNA-directed RNA polymerase (Fragment) n=1 Tax=Amphizoa lecontei
           RepID=B4YT42_AMPLE
          Length = 562

 Score =  178 bits (451), Expect = 2e-43
 Identities = 94/179 (52%), Positives = 122/179 (68%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 297 EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGED 356

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYL----SQAALNDIHSGG 350
           GL G +VE Q L T++ +N +F K++          + SN  YL    ++  L  +   G
Sbjct: 357 GLCGEMVEFQTLPTVKLSNKAFEKKFRF--------DPSNERYLRRIFNEEILRQLMGSG 408

Query: 351 DVTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
           DV   L +EW QL KDR+ LR ++F TGE+K+ L  N++R+IWN ++IF + +   +DL
Sbjct: 409 DVISELEREWDQLSKDREALR-QIFPTGESKVVLPCNLQRMIWNVQKIFHINKRATTDL 466

[22][TOP]
>UniRef100_A9QMR5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhabditoides
           inermiformis RepID=A9QMR5_9BILA
          Length = 524

 Score =  178 bits (451), Expect = 2e-43
 Identities = 91/175 (52%), Positives = 123/175 (70%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + +IQ  YGED
Sbjct: 34  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMIQLRYGED 93

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE Q++ T++ TN +F K++     D   +++ N  Y +   + D+    +  +
Sbjct: 94  GLDGMWVESQQMATMKLTNSAFEKQFKTNLAD---EKALNKVYTAD-VVRDLQESPEALK 149

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +  EW QL++DR  LR ++F  G++K+ L  N++RLIWNA++IF V   ++S L
Sbjct: 150 EVEAEWLQLEEDRRLLR-KIFPKGDSKVVLPCNLQRLIWNAQKIFHVETREKSSL 203

[23][TOP]
>UniRef100_A9QMP5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Oscheius insectivora
           RepID=A9QMP5_9BILA
          Length = 474

 Score =  178 bits (451), Expect = 2e-43
 Identities = 95/175 (54%), Positives = 121/175 (69%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 33  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSIGQMIQLRYGED 92

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + T++ +N  F K + L   DL   ++    Y ++  + D+     V E
Sbjct: 93  GLDGMWVENQTMPTMKPSNALFEKEFKL---DLSDDKAVRKVY-TEDLIRDLQGDSQVME 148

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            + KEW QL++DR  LR ++F TG+AK+ L  N++RLIWNA++IF V     + L
Sbjct: 149 EVEKEWDQLEEDRRLLR-KIFPTGDAKIVLPCNLQRLIWNAQKIFHVETRQPTSL 202

[24][TOP]
>UniRef100_Q2PYP9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neocallimastix sp.
            GE13 RepID=Q2PYP9_9FUNG
          Length = 813

 Score =  178 bits (451), Expect = 2e-43
 Identities = 94/178 (52%), Positives = 122/178 (68%), Gaps = 3/178 (1%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K++EDV +KYDGTVRNS   +IQF YGED
Sbjct: 549  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSLEDVSIKYDGTVRNSFGHIIQFCYGED 608

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRY--HLTEPDLHLQESSNSPYLSQAALNDIHSGGDV 356
            G+DG  VE Q+L ++R ++  F K Y   LT+ D  L+  +    L  + L D+    +V
Sbjct: 609  GMDGTSVEKQQLESIRMSDAKFEKFYKIDLTDKDFGLKPKT----LQFSILEDLAQQSNV 664

Query: 357  T-ELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
              E L +E+  L++DR   R  +FK G++  PL VN+ RLIWNA+ IF + +   SDL
Sbjct: 665  VQEKLDEEYKSLQEDRKLFREFIFKNGDSSWPLPVNVRRLIWNAQNIFSINKRKESDL 722

[25][TOP]
>UniRef100_C3U0C3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Xeromyces bisporus
           RepID=C3U0C3_9EURO
          Length = 618

 Score =  178 bits (451), Expect = 2e-43
 Identities = 95/175 (54%), Positives = 126/175 (72%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAM GREGLIDTAVKTAETGYIQR+LVKA+E+VMVKYDGTVRNS   V+QF+YGED
Sbjct: 359 EFFFHAMAGREGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDVVQFVYGED 418

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDGA +++Q++  +R +ND F KR+ +   DL   E +  P + + A N+I    +V +
Sbjct: 419 GLDGAHIKNQRVDVIRCSNDKFKKRFRV---DLMDPEWTLGPEVLEQA-NEIKGDMEVQK 474

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            L +EW QL KDR+FLR  V K  E  + L +N++R++ +AK  F +R+   SDL
Sbjct: 475 YLDEEWEQLVKDREFLR-SVAKEDEEMMQLPINVQRILESAKTTFRIREGTISDL 528

[26][TOP]
>UniRef100_A1YIC6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neocallimastix
            frontalis RepID=A1YIC6_NEOFR
          Length = 1004

 Score =  178 bits (451), Expect = 2e-43
 Identities = 94/178 (52%), Positives = 122/178 (68%), Gaps = 3/178 (1%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K++EDV +KYDGTVRNS   +IQF YGED
Sbjct: 735  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSLEDVSIKYDGTVRNSFGHIIQFCYGED 794

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRY--HLTEPDLHLQESSNSPYLSQAALNDIHSGGDV 356
            G+DG  VE Q+L ++R ++  F K Y   LT+ D  L+  +    L  + L D+    +V
Sbjct: 795  GMDGTSVEKQQLESIRMSDAKFEKFYKIDLTDKDFGLKPKT----LQFSILEDLAQQSNV 850

Query: 357  T-ELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
              E L +E+  L++DR   R  +FK G++  PL VN+ RLIWNA+ IF + +   SDL
Sbjct: 851  VQEKLDEEYKSLQEDRKLFREFIFKNGDSSWPLPVNVRRLIWNAQNIFSINKRKESDL 908

[27][TOP]
>UniRef100_A1YIB9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Allomyces macrogynus
            RepID=A1YIB9_ALLMA
          Length = 1008

 Score =  178 bits (451), Expect = 2e-43
 Identities = 94/177 (53%), Positives = 124/177 (70%), Gaps = 2/177 (1%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KA+ED+MVKYDGTVRN++  +IQF YGED
Sbjct: 740  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKALEDIMVKYDGTVRNAQGHIIQFAYGED 799

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYH--LTEPDLHLQESSNSPYLSQAALNDIHSGGDV 356
            G+DG  VE Q L  LR  N  F +RY   LT+P+    +    P   +  +       +V
Sbjct: 800  GMDGTRVEAQILEPLRMNNHRFERRYRIDLTDPE---GKKGLKPGSVEFGIQQEMQSIEV 856

Query: 357  TELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             +LL +E+ QL++DR+ LRH +F  G+A+ PL  NI+R+IWNA+ +F + +   S+L
Sbjct: 857  QQLLDQEYRQLEEDRERLRH-IFPRGDARWPLPGNIQRIIWNAQNLFKIDKTKPSNL 912

[28][TOP]
>UniRef100_O02475 DNA-directed RNA polymerase (Fragment) n=1 Tax=Triops longicaudatus
           RepID=O02475_9CRUS
          Length = 543

 Score =  177 bits (450), Expect = 3e-43
 Identities = 94/179 (52%), Positives = 120/179 (67%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 295 EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGED 354

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYL----SQAALNDIHSGG 350
           GL   +VE Q L T++ +N +F K++          + SN  YL    S+    D+ + G
Sbjct: 355 GLSAEMVEFQSLPTIKLSNSAFLKKFRF--------DPSNERYLRRIFSEDVTRDLMTSG 406

Query: 351 DVTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
           +V   L  EW QL +DRD LR ++F TGE K+ L  N++R+IWN ++IF + +   +DL
Sbjct: 407 EVISELDAEWEQLSRDRDALR-QIFPTGENKVVLPCNLQRMIWNVQKIFHINKRAPTDL 464

[29][TOP]
>UniRef100_B4YT35 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tenomerga cinerea
           RepID=B4YT35_9COLE
          Length = 553

 Score =  177 bits (450), Expect = 3e-43
 Identities = 94/179 (52%), Positives = 122/179 (68%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 297 EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGED 356

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYL----SQAALNDIHSGG 350
           GL G +VE Q L T++ +N +F K++          + SN  YL    ++  L  +   G
Sbjct: 357 GLCGEMVEFQTLPTVKLSNKAFEKKFRF--------DPSNERYLRRIFNEEILRQLMGSG 408

Query: 351 DVTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
           DV   L +EW QL KDR+ LR ++F TGE+K+ L  N++R+IWN ++IF + +   +DL
Sbjct: 409 DVISELEREWDQLTKDREALR-QIFPTGESKVVLPCNLQRMIWNVQKIFHINKRATTDL 466

[30][TOP]
>UniRef100_A9UEE2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cephaloboides cf.
           armata SB363 RepID=A9UEE2_9BILA
          Length = 475

 Score =  177 bits (450), Expect = 3e-43
 Identities = 94/175 (53%), Positives = 119/175 (68%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 34  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLGQMIQLRYGED 93

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + T++ TN  F K + L   D    E S     ++  + ++    +  +
Sbjct: 94  GLDGMWVENQHMPTMKPTNIVFEKEFKLDVAD----EKSLRKLYTEDVVRELQGSTEALK 149

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
               EWAQL++DR  LR ++F TG+AK+ L  N++RLIWNA++IF V     +DL
Sbjct: 150 ESEGEWAQLEEDRRLLR-KIFPTGDAKIVLPCNLQRLIWNAQKIFHVETRKPTDL 203

[31][TOP]
>UniRef100_A1YIB6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Basidiobolus ranarum
            RepID=A1YIB6_9FUNG
          Length = 1018

 Score =  177 bits (450), Expect = 3e-43
 Identities = 93/175 (53%), Positives = 116/175 (66%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EF+FHAMGGREGLIDTAVKTAETGYIQRRLVKA+EDVMVKYDGTVRNS  ++IQF YGED
Sbjct: 750  EFYFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDVMVKYDGTVRNSLGNIIQFCYGED 809

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+DG  VE Q L ++R  ND F K Y +   D   ++   S  L    L D+        
Sbjct: 810  GMDGCHVEKQTLDSIRMANDKFEKSYKVDVMD--KEKGFKSGVLEFNILKDVEGNDSTQM 867

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +L +E+ QL  DR  LR  +F +G+   PL  N+ RL+WNA+ IF + +   S+L
Sbjct: 868  MLDEEYRQLCDDRRVLREFIFTSGDQAWPLPGNLRRLVWNAQNIFHIDKRKPSNL 922

[32][TOP]
>UniRef100_UPI000186D846 predicted protein n=1 Tax=Pediculus humanus corporis
            RepID=UPI000186D846
          Length = 1885

 Score =  177 bits (449), Expect = 4e-43
 Identities = 94/179 (52%), Positives = 123/179 (68%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 820  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGED 879

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYL----SQAALNDIHSGG 350
            GL G  VE Q L T++ +N +F KR+          +++N  YL    ++  L ++   G
Sbjct: 880  GLCGETVEFQTLPTIKLSNKAFEKRFRF--------DATNERYLRRIFNENILKELMGSG 931

Query: 351  DVTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +V   L KEW QL+KDR+ LR ++F +GE K+ L  N++R+IWN ++IF + +   +DL
Sbjct: 932  EVISYLEKEWDQLQKDREALR-QIFPSGENKVVLPCNLQRMIWNVQKIFHINKRAPTDL 989

[33][TOP]
>UniRef100_O09451 DNA-directed RNA polymerase (Fragment) n=1 Tax=Bonnemaisonia hamifera
            RepID=O09451_9FLOR
          Length = 1732

 Score =  177 bits (449), Expect = 4e-43
 Identities = 88/176 (50%), Positives = 118/176 (67%), Gaps = 1/176 (0%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAMED+MV+YDGTVRNS + +++FLYGED
Sbjct: 724  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEDIMVRYDGTVRNSCNHIVEFLYGED 783

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHL-QESSNSPYLSQAALNDIHSGGDVT 359
             +D   +EDQ + T + ++      Y +   D    Q+    PYL    +  +     + 
Sbjct: 784  SMDATFLEDQVIRTAKMSDKKLRDEYFIDPSDPKFGQDEKGRPYLDPNIVERVRQDAALH 843

Query: 360  ELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
              L  E+ Q++ DR  LR  + KTGE+K PLAVN++R+IWNAK+  ++  +  SDL
Sbjct: 844  VELRLEFQQIEADRKLLRDYIIKTGESKRPLAVNVDRVIWNAKQEHNIHADSVSDL 899

[34][TOP]
>UniRef100_A9QMT4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pellioditis sp.
           JU274 RepID=A9QMT4_9PELO
          Length = 280

 Score =  177 bits (449), Expect = 4e-43
 Identities = 92/175 (52%), Positives = 122/175 (69%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 39  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSIGQLIQLRYGED 98

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + T++ TN +F + + L   D    E +   + ++  + +I    +  +
Sbjct: 99  GLDGMWVENQNMITMKPTNQNFERDFKLDLAD----ERTLRKFYTEDTVREIQGSTEALK 154

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
           L+ +EWAQL++DR  LR ++F  G+AK+ L  N+ RLIWNA++IF V     ++L
Sbjct: 155 LVEEEWAQLEEDRRLLR-KIFPRGDAKVVLPCNLNRLIWNAQKIFKVETRKLTNL 208

[35][TOP]
>UniRef100_O02459 DNA-directed RNA polymerase (Fragment) n=1 Tax=Periplaneta
           americana RepID=O02459_PERAM
          Length = 468

 Score =  176 bits (447), Expect = 7e-43
 Identities = 94/179 (52%), Positives = 122/179 (68%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 220 EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGED 279

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYL----SQAALNDIHSGG 350
           GL G  VE Q L T++ +N +F K++          + +N  YL    ++  L ++   G
Sbjct: 280 GLCGETVEFQNLPTIKLSNKAFEKKFKF--------DPTNERYLRRIFNEDILKELMGSG 331

Query: 351 DVTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
           DV   L KEW QL KDR+ LR ++F +GE+K+ L  N++R+IWN ++IF + +   +DL
Sbjct: 332 DVISELEKEWEQLVKDREALR-QIFPSGESKVVLPCNLQRMIWNVQKIFHINKRAPTDL 389

[36][TOP]
>UniRef100_A9QMG3 RNA polymerase 2 (Fragment) n=1 Tax=Choriorhabditis cristata
           RepID=A9QMG3_9BILA
          Length = 270

 Score =  176 bits (447), Expect = 7e-43
 Identities = 91/175 (52%), Positives = 119/175 (68%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + +IQ  YGED
Sbjct: 25  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMIQLRYGED 84

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + T++ TN  F + + L   D    E     +  +  + ++    +   
Sbjct: 85  GLDGMWVENQNMPTMKPTNVLFEEGFKLDLSD----EKWMRKHYKEEVVRELQGSSEALT 140

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            + +EW QL++DR  LR ++F TG+AK+ L  N++RLIWNA++IF V     +DL
Sbjct: 141 EIEEEWRQLEEDRRLLR-KIFPTGDAKIVLPCNLQRLIWNAQKIFHVHMRQTTDL 194

[37][TOP]
>UniRef100_Q9C428 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monoblepharis
            macrandra RepID=Q9C428_9FUNG
          Length = 1603

 Score =  176 bits (447), Expect = 7e-43
 Identities = 97/181 (53%), Positives = 123/181 (67%), Gaps = 6/181 (3%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKA+EDVMVKYDGTVRNS   V+QF+YGED
Sbjct: 752  EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDVMVKYDGTVRNSLGHVVQFVYGED 811

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIH-----SG 347
            G+D   VE Q+L T+R T + F +RY L   DL   E+    +L     ND+       G
Sbjct: 812  GMDATGVERQQLETIRMTEEEFKRRYKL---DLMTPETRK--WLPTVVTNDVRHELLGDG 866

Query: 348  GDV-TELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSD 524
             D   ++L  E+ QL +DR+ +R+ +F+ G++  PL  NI RLIWNA+ +  +  N  S+
Sbjct: 867  MDENAKVLEMEYTQLVEDRNVMRNFIFRNGDSNWPLPSNIRRLIWNARNMAKISHNTLSN 926

Query: 525  L 527
            L
Sbjct: 927  L 927

[38][TOP]
>UniRef100_Q2PYS1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Basidiobolus ranarum
            RepID=Q2PYS1_9FUNG
          Length = 1015

 Score =  176 bits (447), Expect = 7e-43
 Identities = 93/176 (52%), Positives = 119/176 (67%), Gaps = 1/176 (0%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EF+FHAMGGREGLIDTAVKTAETGYIQRRLVKA+EDVMVKYDGTVRNS  ++IQF YGED
Sbjct: 752  EFYFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDVMVKYDGTVRNSLGNIIQFCYGED 811

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSP-YLSQAALNDIHSGGDVT 359
            G+DG  VE Q L ++R +N+ F K Y +   D+  +E    P  L    L D+       
Sbjct: 812  GMDGCFVEKQTLDSIRMSNEKFEKSYKV---DVMDKEKGFKPGVLEFNILKDVEGNDSTQ 868

Query: 360  ELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             +L +E+ QL  DR  LR  +F +G+   PL  N++RL+WNA+ IF + +   S+L
Sbjct: 869  MMLDEEYRQLCDDRRVLREFIFTSGDQAWPLPGNLKRLVWNAQNIFHIDKRKPSNL 924

[39][TOP]
>UniRef100_C3U0B8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Gymnoascus reesii
           RepID=C3U0B8_9EURO
          Length = 618

 Score =  176 bits (447), Expect = 7e-43
 Identities = 95/175 (54%), Positives = 124/175 (70%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAM GREGLIDTAVKTAETGYIQR+LVKA+E+VMVKYDGTVRNS   ++QFLYGED
Sbjct: 359 EFFFHAMAGREGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDIVQFLYGED 418

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  +E+Q++  +R +++ F KRY +   DL   ES+ SP + + A  +I    +V +
Sbjct: 419 GLDGQHIENQRVDVIRCSDEQFRKRYRI---DLMDPESTLSPDILEQA-GEIAGDMEVQK 474

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            L +EW QL  DR FLR  V K  E K+ L +N++R++ +AK  F +R    SDL
Sbjct: 475 YLDEEWEQLVADRKFLR-SVAKEDEEKMQLPINVQRILESAKTAFRIRDGTISDL 528

[40][TOP]
>UniRef100_A1YIC2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coelomomyces
            stegomyiae RepID=A1YIC2_9FUNG
          Length = 1014

 Score =  176 bits (447), Expect = 7e-43
 Identities = 92/175 (52%), Positives = 124/175 (70%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKA+EDVMVKYDGTVRN++ ++IQF+YGED
Sbjct: 746  EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDVMVKYDGTVRNAQGNIIQFVYGED 805

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   VE Q L +LR  +  F  +Y +   D+   ++   P   +  +       DV +
Sbjct: 806  GMDAIQVEKQTLDSLRMNDSRFESKYRIDVMDIE-GKAGLPPGCVEFGIQQEMQSIDVQK 864

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            LL +E++QLK DR  LR ++F TG+A  PL +N++R+IWNA+ +F + +   S+L
Sbjct: 865  LLDEEFSQLKDDRACLR-KIFLTGDANWPLPMNLKRIIWNAQNLFKIDKQRPSNL 918

[41][TOP]
>UniRef100_Q9NJM1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hanseniella sp.
           'Han' RepID=Q9NJM1_9MYRI
          Length = 468

 Score =  176 bits (446), Expect = 9e-43
 Identities = 90/175 (51%), Positives = 118/175 (67%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGT+RNS   +IQ  YGED
Sbjct: 220 EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVTYDGTIRNSVCQLIQLRYGED 279

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE Q + TL+  +D+F +++     +    E +     ++  + D+     V  
Sbjct: 280 GLDGGAVEFQSMPTLKPNHDAFARKFRFDVSN----ERNMRKIFTEDVVKDLIGSAQVLS 335

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            L KEW  L+KDR  LR E+F  G++K+ L  N++R+IWNA++IF + Q   +DL
Sbjct: 336 ELEKEWELLQKDRKSLR-EIFPKGDSKVVLPCNLQRMIWNAQKIFHINQRSATDL 389

[42][TOP]
>UniRef100_O02450 DNA-directed RNA polymerase (Fragment) n=1 Tax=Limulus polyphemus
           RepID=O02450_LIMPO
          Length = 778

 Score =  176 bits (446), Expect = 9e-43
 Identities = 94/179 (52%), Positives = 119/179 (66%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VM  YDGTVRNS   VIQ  YGED
Sbjct: 365 EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMATYDGTVRNSTGQVIQLKYGED 424

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYL----SQAALNDIHSGG 350
           GLDG  VE Q L TL+ ++ +F K++           +SN  YL    ++  + D+    
Sbjct: 425 GLDGTAVEVQSLPTLKPSDKAFEKKFRF--------NASNERYLRRIFTEDVVRDLMGSA 476

Query: 351 DVTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
                L KEW +LK DR+ LR  +F TG++K+ L  N++R+IW+A++IF V Q   +DL
Sbjct: 477 TALSELEKEWEKLKHDRELLR-AIFPTGDSKVVLPCNLQRMIWSAQKIFHVNQRAPTDL 534

[43][TOP]
>UniRef100_Q6GYH6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Prodontorhabditis
           wirthi RepID=Q6GYH6_9BILA
          Length = 630

 Score =  176 bits (445), Expect = 1e-42
 Identities = 92/175 (52%), Positives = 118/175 (67%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRN+   +IQ  YGED
Sbjct: 46  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNAIGQMIQLRYGED 105

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+  + T++ TN  F + + L   D    E +   Y ++  + D+ S  +   
Sbjct: 106 GLDGMWVENPNMPTMKPTNAVFEREFKLDLED----EKALKKYYTEDVVRDLVSSTEAFR 161

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +  EWAQL++DR  LR ++F TG AK+ L  N++RLIWNA++IF V     + L
Sbjct: 162 EVEAEWAQLEEDRQLLR-KIFPTGNAKIVLPCNLQRLIWNAQKIFHVEMRKPTTL 215

[44][TOP]
>UniRef100_Q6E225 DNA-directed RNA polymerase (Fragment) n=1 Tax=Caenorhabditis sp.
           SB341 RepID=Q6E225_9PELO
          Length = 622

 Score =  176 bits (445), Expect = 1e-42
 Identities = 94/167 (56%), Positives = 118/167 (70%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + +IQ  YGED
Sbjct: 44  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMIQLRYGED 103

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + T++ TN  F K + L   DL  + +  S Y  +  +  +    D  E
Sbjct: 104 GLDGMWVENQSMPTMKPTNAVFEKDFRL---DLADERTLKSCY-EEHVVRQLKEAPDAIE 159

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDV 503
            +  EW QL++DR  LR ++F TG+AK+ L  N++RLIWNA++IF V
Sbjct: 160 KVEAEWNQLEEDRRLLR-KIFPTGDAKVVLPCNLQRLIWNAQKIFKV 205

[45][TOP]
>UniRef100_A9QMP3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhabditis brassicae
           RepID=A9QMP3_9BILA
          Length = 406

 Score =  176 bits (445), Expect = 1e-42
 Identities = 90/175 (51%), Positives = 120/175 (68%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREG+IDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + +IQ  YGED
Sbjct: 44  EFFFHAMGGREGIIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMIQLRYGED 103

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q L T++ T+  F K + L   D    E +   Y ++  + ++    +  +
Sbjct: 104 GLDGMWVENQTLPTMKPTHALFEKDFKLDLSD----EKTLRKYYTEDVIRELQGSSEAIK 159

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            + +EW QL++DR  LR ++F  G AK+ L  N++RL+WNA++IF V     +DL
Sbjct: 160 EVEQEWGQLEEDRRLLR-KIFPNGNAKIVLPCNLQRLLWNAQKIFHVETRKPTDL 213

[46][TOP]
>UniRef100_A9QME1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhabditis brassicae
           RepID=A9QME1_9BILA
          Length = 628

 Score =  176 bits (445), Expect = 1e-42
 Identities = 90/175 (51%), Positives = 120/175 (68%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREG+IDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + +IQ  YGED
Sbjct: 37  EFFFHAMGGREGIIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMIQLRYGED 96

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q L T++ T+  F K + L   D    E +   Y ++  + ++    +  +
Sbjct: 97  GLDGMWVENQTLPTMKPTHALFEKDFKLDLSD----EKTLRKYYTEDVIRELQGSSEAIK 152

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            + +EW QL++DR  LR ++F  G AK+ L  N++RL+WNA++IF V     +DL
Sbjct: 153 EVEQEWGQLEEDRRLLR-KIFPNGNAKIVLPCNLQRLLWNAQKIFHVETRKPTDL 206

[47][TOP]
>UniRef100_Q9NJJ2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tomocerus sp.
           jcrjws1 RepID=Q9NJJ2_9HEXA
          Length = 543

 Score =  175 bits (444), Expect = 2e-42
 Identities = 92/179 (51%), Positives = 120/179 (67%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME VM+ YDGTVRNS   +IQ  YGED
Sbjct: 295 EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMIHYDGTVRNSVGQLIQLRYGED 354

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYL----SQAALNDIHSGG 350
           GLDG  VE Q L T++ +N SF  ++          + +N  YL    ++  + DI   G
Sbjct: 355 GLDGVQVEFQSLPTVKLSNRSFESKFKF--------DPTNERYLRRVFTEDVMRDIMGSG 406

Query: 351 DVTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
           +V   + KEW  L+KDR  LR ++F TGE K+ L  N++R+IWN ++IF + +   +DL
Sbjct: 407 EVISAIEKEWEALQKDRAVLR-QIFPTGENKVVLPCNLQRMIWNVQKIFHINKRAPTDL 464

[48][TOP]
>UniRef100_Q6E226 DNA-directed RNA polymerase (Fragment) n=1 Tax=Caenorhabditis
           plicata RepID=Q6E226_9PELO
          Length = 636

 Score =  175 bits (444), Expect = 2e-42
 Identities = 91/175 (52%), Positives = 118/175 (67%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   ++Q  YG+D
Sbjct: 44  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLGQMVQLRYGQD 103

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + T++ TN  F + +     D +   +S     + + + +I    D  E
Sbjct: 104 GLDGMWVENQNMPTMKPTNAVFERDFRTDLTDDNFMRNS----YTDSVIREIQESEDAIE 159

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +  EWAQL++DR  LR ++F  G+AK+ L  N++RLIWNA++IF V      DL
Sbjct: 160 KVESEWAQLEEDRRLLR-KIFPKGDAKIVLPCNLQRLIWNAQKIFKVDTRKPVDL 213

[49][TOP]
>UniRef100_B4YT44 DNA-directed RNA polymerase (Fragment) n=1 Tax=Asaphidion yukonense
           RepID=B4YT44_9CARA
          Length = 562

 Score =  175 bits (444), Expect = 2e-42
 Identities = 91/179 (50%), Positives = 122/179 (68%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 297 EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGED 356

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYL----SQAALNDIHSGG 350
           GL G +VE Q L T++ +N +F K++          + SN  YL    ++  +  +   G
Sbjct: 357 GLCGEMVEFQTLPTVKLSNKAFEKKFRF--------DPSNERYLRRIFNEEIIKQLMGSG 408

Query: 351 DVTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
           DV   L +EW QL +DR+ LR ++F +GE+K+ L  N++R+IWN ++IF + +   +DL
Sbjct: 409 DVISELEREWEQLSRDREALR-QIFPSGESKVVLPCNLQRMIWNVQKIFHINKRSPTDL 466

[50][TOP]
>UniRef100_A9QMG2 RNA polymerase 2 (Fragment) n=1 Tax=Oscheius dolichura
           RepID=A9QMG2_9BILA
          Length = 273

 Score =  175 bits (444), Expect = 2e-42
 Identities = 90/171 (52%), Positives = 118/171 (69%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   ++Q  YGED
Sbjct: 30  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSIGQMVQLRYGED 89

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + +++ +N  F + + L   D    E +     ++  + D+    D  E
Sbjct: 90  GLDGMWVENQSMPSMKPSNALFERDFKLDLTD----EKTLKKCYTEDLIRDLQGSPDAIE 145

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQND 515
            +  EWAQL++DR  LR ++F TGE+K  L  N++RLIWNA++IF V + +
Sbjct: 146 EVENEWAQLEEDRRLLR-KIFSTGESKCVLPCNLQRLIWNAQKIFHVEKRE 195

[51][TOP]
>UniRef100_UPI0000D5670C PREDICTED: similar to GA13798-PA n=1 Tax=Tribolium castaneum
            RepID=UPI0000D5670C
          Length = 2007

 Score =  175 bits (443), Expect = 2e-42
 Identities = 91/179 (50%), Positives = 123/179 (68%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 831  EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGED 890

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYL----SQAALNDIHSGG 350
            GL G +VE Q L T++ +N +F +++          + SN  YL    ++  + D+   G
Sbjct: 891  GLCGEMVEFQTLPTVKLSNKAFERKFRF--------DPSNERYLRRVFTEEVIKDLMGSG 942

Query: 351  DVTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +V   L  EW QL+KDR+ LR ++F +GE+K+ L  N++R+IWN ++IF + +   +DL
Sbjct: 943  EVISELETEWEQLQKDREALR-QIFPSGESKVVLPCNLQRMIWNVQKIFHINKRAPTDL 1000

[52][TOP]
>UniRef100_A9U396 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
            patens RepID=A9U396_PHYPA
          Length = 1742

 Score =  175 bits (443), Expect = 2e-42
 Identities = 95/175 (54%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMEDVMVKYDGTVRNS   VIQFLYGED
Sbjct: 833  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGED 892

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   +E QKL +L+     F + Y   E D   ++     Y+S  A  DI +  ++  
Sbjct: 893  GMDSVWIESQKLDSLKMKKAEFNRVYRF-EID---RDDWAPDYMSAEAAEDIKTIQEIRN 948

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +   E ++L+ DR  +  E+  TGE+  PL VN++RLIWNA++IF V     SD+
Sbjct: 949  VFDAEVSKLEADRRQMGLEIAPTGESNWPLPVNLKRLIWNAQKIFKVDLRKSSDM 1003

[53][TOP]
>UniRef100_B4YT54 DNA-directed RNA polymerase (Fragment) n=2 Tax=Odontium subgenus
           complex RepID=B4YT54_9CARA
          Length = 473

 Score =  175 bits (443), Expect = 2e-42
 Identities = 91/179 (50%), Positives = 122/179 (68%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 208 EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGED 267

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYL----SQAALNDIHSGG 350
           GL G +VE Q L T++ +N +F K++          + SN  YL    ++  +  +   G
Sbjct: 268 GLCGEMVEFQTLPTVKLSNKAFEKKFRF--------DPSNERYLRRIFNEDIIKQLMGSG 319

Query: 351 DVTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
           DV   L +EW QL +DR+ LR ++F +GE+K+ L  N++R+IWN ++IF + +   +DL
Sbjct: 320 DVISELEREWEQLSRDREALR-QIFPSGESKVVLPCNLQRMIWNVQKIFHINKRSPTDL 377

[54][TOP]
>UniRef100_B4YT49 DNA-directed RNA polymerase (Fragment) n=1 Tax=Bembidion
           mandibulare RepID=B4YT49_9CARA
          Length = 562

 Score =  175 bits (443), Expect = 2e-42
 Identities = 91/179 (50%), Positives = 122/179 (68%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 297 EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGED 356

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYL----SQAALNDIHSGG 350
           GL G +VE Q L T++ +N +F K++          + SN  YL    ++  +  +   G
Sbjct: 357 GLCGEMVEFQTLPTVKLSNKAFEKKFRF--------DPSNERYLRRIFNEDIIKQLMGSG 408

Query: 351 DVTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
           DV   L +EW QL +DR+ LR ++F +GE+K+ L  N++R+IWN ++IF + +   +DL
Sbjct: 409 DVISELEREWEQLSRDREALR-QIFPSGESKVVLPCNLQRMIWNVQKIFHINKRSPTDL 466

[55][TOP]
>UniRef100_B4YT46 DNA-directed RNA polymerase (Fragment) n=3 Tax=Bembidion
           RepID=B4YT46_9CARA
          Length = 562

 Score =  175 bits (443), Expect = 2e-42
 Identities = 91/179 (50%), Positives = 122/179 (68%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 297 EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGED 356

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYL----SQAALNDIHSGG 350
           GL G +VE Q L T++ +N +F K++          + SN  YL    ++  +  +   G
Sbjct: 357 GLCGEMVEFQTLPTVKLSNKAFEKKFRF--------DPSNERYLRRIFNEDIIKQLMGSG 408

Query: 351 DVTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
           DV   L +EW QL +DR+ LR ++F +GE+K+ L  N++R+IWN ++IF + +   +DL
Sbjct: 409 DVISELEREWEQLSRDREALR-QIFPSGESKVVLPCNLQRMIWNVQKIFHINKRSPTDL 466

[56][TOP]
>UniRef100_Q2PYS6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Polychytrium
            aggregatum RepID=Q2PYS6_9FUNG
          Length = 1016

 Score =  175 bits (443), Expect = 2e-42
 Identities = 97/176 (55%), Positives = 120/176 (68%), Gaps = 1/176 (0%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMV+YDGT+R+S  +VIQF YGED
Sbjct: 753  EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVRYDGTIRDSLGTVIQFCYGED 812

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSP-YLSQAALNDIHSGGDVT 359
            G+DGA VE Q L +L  ++  F K Y +   DL   +    P  L      ++ S G   
Sbjct: 813  GMDGAKVERQNLESLAMSDAKFEKAYRV---DLTGGQYGLKPGVLDFRTQENLLSDGLTQ 869

Query: 360  ELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
              L +E+ QL+KDR+ LR  +FK G +  PL VN++RLIWNA+  F+V     +DL
Sbjct: 870  NRLDQEFEQLRKDRETLRWTIFKDGSSSWPLPVNLKRLIWNAQNQFEVGPRKPTDL 925

[57][TOP]
>UniRef100_B4YT40 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dineutes sublineatus
           RepID=B4YT40_9COLE
          Length = 562

 Score =  174 bits (442), Expect = 3e-42
 Identities = 92/179 (51%), Positives = 122/179 (68%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 297 EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGED 356

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYL----SQAALNDIHSGG 350
           GL G +VE Q L T++ +N SF K++          + SN  YL    ++  +  +    
Sbjct: 357 GLCGEMVEFQTLPTVKLSNKSFEKKFRF--------DPSNERYLRRIFNEDIIRQLMGSA 408

Query: 351 DVTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
           DV   L +EW QL KDR+ LR ++F +GE+K+ L  N++R+IWN ++IF + +  ++DL
Sbjct: 409 DVISELEREWEQLVKDRETLR-QIFPSGESKVVLPCNLQRMIWNVQKIFHINKRAQTDL 466

[58][TOP]
>UniRef100_A9QMF3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhabditoides regina
           RepID=A9QMF3_9BILA
          Length = 626

 Score =  174 bits (442), Expect = 3e-42
 Identities = 93/167 (55%), Positives = 118/167 (70%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + +IQ  YGED
Sbjct: 40  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMIQLRYGED 99

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE Q + T++ TN +F K++ L   DL    S    Y S+  + D+    D  +
Sbjct: 100 GLDGMWVEGQMMPTMKLTNAAFEKQFKL---DLSDDRSLRRIY-SEEVVRDLQGSTDALK 155

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDV 503
            +  EW QL++DR  LR ++F  G++K+ L  N++RLIWNA++IF V
Sbjct: 156 EVEDEWLQLEEDRRLLR-KIFPKGDSKVVLPCNLQRLIWNAQKIFKV 201

[59][TOP]
>UniRef100_A9QMF2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pelodera teres
           RepID=A9QMF2_9PELO
          Length = 629

 Score =  174 bits (442), Expect = 3e-42
 Identities = 93/167 (55%), Positives = 119/167 (71%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + +IQ  YGED
Sbjct: 40  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQLIQLRYGED 99

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE Q + T++ TN +F K++ L   DL  + S    Y S+  + D+       +
Sbjct: 100 GLDGMWVEGQMMPTMKLTNAAFEKQFKL---DLSDERSLRRVY-SEDVVRDLLGSSSALK 155

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDV 503
            + +EW QL++DR  LR ++F  GE+K+ L  N++RLIWNA++IF V
Sbjct: 156 EVEEEWQQLEEDRRLLR-KIFPKGESKVVLPCNLQRLIWNAQKIFKV 201

[60][TOP]
>UniRef100_C4JY44 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704
            RepID=C4JY44_UNCRE
          Length = 1747

 Score =  174 bits (442), Expect = 3e-42
 Identities = 94/175 (53%), Positives = 123/175 (70%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQR+LVKA+E+VMVKYDGTVRNS   VIQFLYGED
Sbjct: 787  EFFFHAMAGREGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDVIQFLYGED 846

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDGA +E+Q++  ++ +++ F  R+ +   DL   E S SP + + A  +I    +V  
Sbjct: 847  GLDGAFIENQRVDVIKCSDEQFRNRFRI---DLMDPEKSLSPEILEQA-TEITGDIEVQR 902

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +EW QL+KDR FLR    K  E  + L +N++R++ +AK  F +R+   SDL
Sbjct: 903  YLDEEWEQLQKDRVFLR-SAAKEDEEMMQLPINVQRILESAKTTFRIREGTISDL 956

[61][TOP]
>UniRef100_C3U0C0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Leucothecium emdenii
            RepID=C3U0C0_9EURO
          Length = 992

 Score =  174 bits (442), Expect = 3e-42
 Identities = 97/175 (55%), Positives = 125/175 (71%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQR+LVKA+E+VMVKYDGTVRNS   V+QFLYGED
Sbjct: 734  EFFFHAMAGREGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDVVQFLYGED 793

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDGA +E+Q++  ++S+++ F KR+ +   DL   E+S    L QA  ++I    +V +
Sbjct: 794  GLDGASIENQRVDVIKSSDEQFRKRFRVDLMDL---ETSLYETLEQA--SEIAGDIEVQK 848

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L  EW QL KDR FLR  V K  E  + L +NI+R++ +AK  F +R+   SDL
Sbjct: 849  HLDDEWEQLLKDRAFLR-SVAKEDEEMMQLPMNIQRILESAKTTFRIREGTISDL 902

[62][TOP]
>UniRef100_B4YT48 DNA-directed RNA polymerase (Fragment) n=2 Tax=Notaphus
           RepID=B4YT48_9CARA
          Length = 562

 Score =  174 bits (441), Expect = 3e-42
 Identities = 91/179 (50%), Positives = 121/179 (67%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 297 EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGED 356

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYL----SQAALNDIHSGG 350
           GL G +VE Q L T++ +N +F K+Y          + SN  YL    ++  +  +    
Sbjct: 357 GLCGEMVEFQTLPTVKLSNKAFEKKYRF--------DPSNERYLRRIFNEDIIKQLMGSS 408

Query: 351 DVTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
           DV   L +EW QL +DR+ LR ++F +GE+K+ L  N++R+IWN ++IF + +   +DL
Sbjct: 409 DVISELEREWEQLSRDREALR-QIFPSGESKVVLPCNLQRMIWNVQKIFHINKRSPTDL 466

[63][TOP]
>UniRef100_A9QMQ7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phasmarhabditis sp.
           EM434 RepID=A9QMQ7_9BILA
          Length = 398

 Score =  174 bits (441), Expect = 3e-42
 Identities = 92/175 (52%), Positives = 122/175 (69%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + ++Q  YGED
Sbjct: 44  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMVQLRYGED 103

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + T++ TN  F K + L   DL  ++S    Y ++   +++    +  +
Sbjct: 104 GLDGMWVENQAMPTMKPTNALFEKDFKL---DLSDEKSLRKMY-TEDVQHELQGSSEALK 159

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
               EW QL++DR  LR ++F +G+AK+ L  N++RLIWNA++IF V     +DL
Sbjct: 160 EAEDEWNQLEEDRRLLR-KIFPSGDAKIVLPCNLQRLIWNAQKIFHVETRKPTDL 213

[64][TOP]
>UniRef100_A9QMH3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhabditis sp. PS1130
           RepID=A9QMH3_9BILA
          Length = 619

 Score =  174 bits (441), Expect = 3e-42
 Identities = 89/175 (50%), Positives = 121/175 (69%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREG+IDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + +IQ  YGED
Sbjct: 36  EFFFHAMGGREGIIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMIQLRYGED 95

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q L T++ T+  F + + L   D    E +   Y ++  + ++    +  +
Sbjct: 96  GLDGMWVENQTLPTMKPTHALFEQDFKLDLSD----ERTLRKYYTEDVIRELQGSSEAIK 151

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            + +EW QL++DR  LR ++F +G AK+ L  N++RL+WNA++IF V     +DL
Sbjct: 152 EVEQEWGQLEEDRRLLR-KIFPSGNAKIVLPCNLQRLLWNAQKIFHVETRKPTDL 205

[65][TOP]
>UniRef100_A1YIC0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Catenaria anguillulae
            RepID=A1YIC0_9FUNG
          Length = 1020

 Score =  174 bits (441), Expect = 3e-42
 Identities = 95/177 (53%), Positives = 126/177 (71%), Gaps = 2/177 (1%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKA+ED+MVKYDGTVRN++ ++IQFLYGED
Sbjct: 752  EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDIMVKYDGTVRNAQGNIIQFLYGED 811

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYH--LTEPDLHLQESSNSPYLSQAALNDIHSGGDV 356
            G+DG  VE Q L  LR ++  F  R+   +TEPD        S  +    + +I +  +V
Sbjct: 812  GMDGTRVESQVLEPLRMSDSKFETRFRVDVTEPD--TPRGLRSASVEFGIMKEIQT-AEV 868

Query: 357  TELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             +LL  E+ QL+ DR  L+ +VFK G+A+ PL  N+ R+IWNA+ +F + ++  S+L
Sbjct: 869  QDLLDDEFRQLQVDRAQLQ-QVFKRGDARWPLPGNLNRIIWNAQNMFKLDKSKPSNL 924

[66][TOP]
>UniRef100_A9QMF5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhabditoides inermis
           RepID=A9QMF5_9BILA
          Length = 630

 Score =  174 bits (440), Expect = 4e-42
 Identities = 91/175 (52%), Positives = 119/175 (68%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + +IQ  YGED
Sbjct: 36  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQLIQLRYGED 95

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + +++  N  F + + L   D      +     ++  + D+ S  D  +
Sbjct: 96  GLDGMWVENQSMPSMKPNNALFKRDFKLDITD----TKALKKMYTEEVIRDLQSNPDALK 151

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +  EWAQL++DR  LR ++F  G+AK+ L  N++RLIWNA++IF V     +DL
Sbjct: 152 EVECEWAQLEEDRRLLR-KIFPKGDAKIVLPCNLQRLIWNAQKIFHVETRKPTDL 205

[67][TOP]
>UniRef100_A1YIC1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Blastocladiella
            emersonii RepID=A1YIC1_BLAEM
          Length = 1005

 Score =  174 bits (440), Expect = 4e-42
 Identities = 91/175 (52%), Positives = 121/175 (69%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKA+ED+MVKYDGTVRN++ ++IQF YGED
Sbjct: 737  EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDIMVKYDGTVRNAQGNIIQFAYGED 796

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+DG  VE Q L  LR ++  F +RY +   D+    S   P   +  +       +V E
Sbjct: 797  GMDGTRVESQVLEPLRMSDAKFDRRYRIDVTDVG-GSSGLRPGTVEFGIQREMQSAEVQE 855

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            LL  E+ QL +DR  L+ ++F  G+A+ PL  N+ R+IWNA+ +F + ++  S+L
Sbjct: 856  LLNAEYEQLLRDRRDLQ-QIFPRGDARWPLPCNLNRIIWNAQNLFKIDKSKPSNL 909

[68][TOP]
>UniRef100_A1YIB1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phragmidium sp. MB
            RepID=A1YIB1_9BASI
          Length = 1013

 Score =  174 bits (440), Expect = 4e-42
 Identities = 93/175 (53%), Positives = 117/175 (66%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQRRL+KA+EDVMV YDGTVRNS   ++QF+YGED
Sbjct: 748  EFFFHAMAGREGLIDTAVKTAETGYIQRRLLKALEDVMVTYDGTVRNSLGDIVQFVYGED 807

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+DG  VE Q L  +R +N+ F K++ +   D  +   +    + Q  L+D  S   +  
Sbjct: 808  GVDGGTVEYQNLDPVRLSNEKFDKKFRVDVTDPAMTYKAG---VLQVGLDD--SSAALQS 862

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +L KEW QL KDR  LR  +F  G  + PL VNI R+I NA++IF +     SDL
Sbjct: 863  VLDKEWEQLIKDRKMLREFIFTDGNGRKPLPVNIRRIIQNAQQIFHIDFRKPSDL 917

[69][TOP]
>UniRef100_B9SXC0 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
            RepID=B9SXC0_RICCO
          Length = 1855

 Score =  173 bits (439), Expect = 6e-42
 Identities = 92/177 (51%), Positives = 121/177 (68%), Gaps = 2/177 (1%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMED+MVKYDGTVRNS   VIQFLYGED
Sbjct: 830  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED 889

Query: 183  GLDGALVEDQKLGTLRSTNDSFTK--RYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDV 356
            G+D   +E QKL +L+     F +  +Y L +      E+ N  Y+ Q  ++D+ +  ++
Sbjct: 890  GMDAVWIESQKLDSLKMKKSEFDRVFKYELDD------ENWNPTYMYQDHIDDLKNIREL 943

Query: 357  TELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             ++   E  +L+ DR  L  E+  TG++  PL VN+ RLIWNA++ F V +   SD+
Sbjct: 944  RDVFDAEVQKLEADRYQLGTEIATTGDSSWPLPVNLRRLIWNAQKTFKVDKRRPSDI 1000

[70][TOP]
>UniRef100_B4YT34 DNA-directed RNA polymerase (Fragment) n=1 Tax=Sialis sp. ALW-2008
           RepID=B4YT34_9NEOP
          Length = 555

 Score =  173 bits (439), Expect = 6e-42
 Identities = 93/180 (51%), Positives = 121/180 (67%), Gaps = 5/180 (2%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 297 EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVPYDGTVRNSVGQLIQLRYGED 356

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDI-----HSG 347
           GL G +VE Q L T++ +N +F K++          +  N  YL +    +I      SG
Sbjct: 357 GLCGEMVEFQSLPTVKLSNRAFEKKFKF--------DPGNERYLRRVFTEEIVRQLMASG 408

Query: 348 GDVTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
           GD+ + L KEW QL KDR+ LR ++F +G+ K+ L  N++R+IWN ++IF +     +DL
Sbjct: 409 GDLIQALEKEWDQLVKDREALR-QIFPSGDNKVVLPCNLQRMIWNVQKIFHINGRAPTDL 467

[71][TOP]
>UniRef100_C5GKA7 DNA-directed RNA polymerase n=2 Tax=Ajellomyces dermatitidis
            RepID=C5GKA7_AJEDR
          Length = 1746

 Score =  173 bits (439), Expect = 6e-42
 Identities = 94/175 (53%), Positives = 125/175 (71%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQR+LVKA+E+VMVKYDGTVRNS   V+QFLYGED
Sbjct: 835  EFFFHAMAGREGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDVVQFLYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDGA +E+Q++  ++ +++ F  RY +   DL   E + SP + + A  +I    +V +
Sbjct: 895  GLDGAHIENQRVDIIKCSDERFRDRYRI---DLMDPERTLSPNVLEQA-TEIAGDIEVQK 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +EW QL KDR F+R  V K  E  + L +N++R++ +AK IF +R+   SDL
Sbjct: 951  YLDEEWEQLLKDRAFMR-SVAKEDEEMMQLPINVQRILESAKTIFRIREGAISDL 1004

[72][TOP]
>UniRef100_P36594 DNA-directed RNA polymerase II subunit rpb1 n=1
            Tax=Schizosaccharomyces pombe RepID=RPB1_SCHPO
          Length = 1752

 Score =  173 bits (439), Expect = 6e-42
 Identities = 95/175 (54%), Positives = 120/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQRRLVKAMEDVMV+YDGTVRN+   +IQF YGED
Sbjct: 818  EFFFHAMAGREGLIDTAVKTAETGYIQRRLVKAMEDVMVRYDGTVRNAMGDIIQFAYGED 877

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLD  LVE Q   +LR +   F K+Y +   DL +++ S S Y+     N I +   V +
Sbjct: 878  GLDATLVEYQVFDSLRLSTKQFEKKYRI---DL-MEDRSLSLYME----NSIENDSSVQD 929

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            LL +E+ QL  DR+ L   +F  G+A+ PL VN++R+I NA +IF +     +DL
Sbjct: 930  LLDEEYTQLVADRELLCKFIFPKGDARWPLPVNVQRIIQNALQIFHLEAKKPTDL 984

[73][TOP]
>UniRef100_Q6E233 RNA polymerase 2 (Fragment) n=1 Tax=Caenorhabditis remanei
           RepID=Q6E233_CAERE
          Length = 611

 Score =  173 bits (438), Expect = 8e-42
 Identities = 89/167 (53%), Positives = 115/167 (68%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + ++Q  YGED
Sbjct: 27  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMVQLRYGED 86

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VEDQ + T++  N  F + + +   D      +     S+  + +I    D   
Sbjct: 87  GLDGMWVEDQNMPTMKPNNAVFERDFRMDLTDNKFLRKN----YSEDVVREIQESEDGIS 142

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDV 503
           L+  EW+QL++DR  LR ++F  G+AK+ L  N++RLIWNA++IF V
Sbjct: 143 LVESEWSQLEEDRRLLR-KIFPRGDAKIVLPCNLQRLIWNAQKIFKV 188

[74][TOP]
>UniRef100_B4YT41 DNA-directed RNA polymerase (Fragment) n=1 Tax=Macrogyrus oblongus
           RepID=B4YT41_9COLE
          Length = 554

 Score =  173 bits (438), Expect = 8e-42
 Identities = 91/179 (50%), Positives = 121/179 (67%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 297 EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGED 356

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYL----SQAALNDIHSGG 350
           GL G +VE Q L T++ +N +F K++          + SN  YL    ++  +  +   G
Sbjct: 357 GLCGEMVEFQTLPTVKLSNKAFEKKFRF--------DPSNERYLRRIFNEDIIRQLMGSG 408

Query: 351 DVTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
           DV   L  EW QL++DR+ LR ++F  GE+K+ L  N++R+IWN ++IF + +   +DL
Sbjct: 409 DVISELELEWEQLRRDREALR-QIFPNGESKVVLPCNLQRMIWNVQKIFHINKRAPTDL 466

[75][TOP]
>UniRef100_B4YT36 DNA-directed RNA polymerase (Fragment) n=1 Tax=Chauliognathus
           opacus RepID=B4YT36_9COLE
          Length = 629

 Score =  173 bits (438), Expect = 8e-42
 Identities = 91/179 (50%), Positives = 122/179 (68%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 364 EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGED 423

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIH----SGG 350
           GL G +VE Q L T++ +N +F +++          + SN  YL +    D+       G
Sbjct: 424 GLCGEMVEFQTLPTVKLSNKAFERKFRF--------DPSNERYLRRIFNEDVSRQLMGSG 475

Query: 351 DVTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
           +V   L +EW QL+KDR+ LR ++F +GE+K+ L  N++R+IWN ++IF + +   +DL
Sbjct: 476 EVISELEREWEQLQKDREALR-QIFPSGESKVVLPCNLQRMIWNVQKIFHINKRAPTDL 533

[76][TOP]
>UniRef100_A9QMF4 RNA polymerase 2 (Fragment) n=1 Tax=Rhabditoides inermiformis
           RepID=A9QMF4_9BILA
          Length = 597

 Score =  173 bits (438), Expect = 8e-42
 Identities = 89/175 (50%), Positives = 121/175 (69%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGRE LIDTAVKTAETGYIQRR +KAME VMV YDGTVRNS + +IQ  YGED
Sbjct: 2   EFFFHAMGGREVLIDTAVKTAETGYIQRRFIKAMESVMVNYDGTVRNSLAQMIQLRYGED 61

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE Q++ T++ TN +F K++     D   +++ N  Y +   + D+    +  +
Sbjct: 62  GLDGMWVESQQMATMKLTNSAFEKQFKTNLAD---EKALNKVYTAD-VVRDLQESPEALK 117

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +  EW QL++DR  LR ++F  G++K+ L  N++RLIWNA++IF V   ++S L
Sbjct: 118 EVEAEWLQLEEDRRLLR-KIFPKGDSKVVLPCNLQRLIWNAQKIFHVETREKSSL 171

[77][TOP]
>UniRef100_A9QMD9 RNA polymerase 2 (Fragment) n=1 Tax=Protorhabditis sp. JB122
           RepID=A9QMD9_9BILA
          Length = 595

 Score =  173 bits (438), Expect = 8e-42
 Identities = 91/175 (52%), Positives = 118/175 (67%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 4   EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSIGQMIQLRYGED 63

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q++ T++ TN  F   + L   D    E     + S+  + ++    +   
Sbjct: 64  GLDGMWVENQQMLTMKPTNAVFESEFKLDITD----EKMLRKHYSEDVVRELMGSPEALR 119

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +  EWAQL++DR  LR ++F  G+AK+ L  N++RLIWNA++IF +     +DL
Sbjct: 120 EVEGEWAQLEEDRRLLR-KIFPNGDAKIVLPCNLQRLIWNAQKIFHIELRKPTDL 173

[78][TOP]
>UniRef100_A8PU11 DNA-directed RNA polymerase n=1 Tax=Brugia malayi RepID=A8PU11_BRUMA
          Length = 1943

 Score =  173 bits (438), Expect = 8e-42
 Identities = 89/175 (50%), Positives = 118/175 (67%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   ++Q  YGED
Sbjct: 900  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLGQLVQLRYGED 959

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDG  VE+Q + +++ TN  F K + L   D    E S     ++  + ++    +  +
Sbjct: 960  GLDGMWVENQSMPSMKPTNALFEKEFKLDLSD----EKSLRKLYTENVVRELQGSAEALK 1015

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             +  EW QL++DR  LR ++F  G+AK+ L  N++R+IWNA++IF V     +DL
Sbjct: 1016 EVEAEWGQLEEDRRLLR-KIFPKGDAKIVLPCNLQRMIWNAQKIFRVELRKPTDL 1069

[79][TOP]
>UniRef100_P18616 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Arabidopsis
            thaliana RepID=RPB1_ARATH
          Length = 1840

 Score =  173 bits (438), Expect = 8e-42
 Identities = 91/175 (52%), Positives = 117/175 (66%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMED+MVKYDGTVRNS   VIQFLYGED
Sbjct: 832  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED 891

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   +E QKL +L+     F + +     D    E+ N  YLS   L D+    ++ +
Sbjct: 892  GMDAVWIESQKLDSLKMKKSEFDRTFKYEIDD----ENWNPTYLSDEHLEDLKGIRELRD 947

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +   E+++L+ DR  L  E+   G++  PL VNI+R IWNA++ F +     SD+
Sbjct: 948  VFDAEYSKLETDRFQLGTEIATNGDSTWPLPVNIKRHIWNAQKTFKIDLRKISDM 1002

[80][TOP]
>UniRef100_Q30BD8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cyanophora paradoxa
            RepID=Q30BD8_CYAPA
          Length = 1000

 Score =  172 bits (437), Expect = 1e-41
 Identities = 89/175 (50%), Positives = 117/175 (66%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRL+KAMEDVMV+YD T RNS   +IQFLYGED
Sbjct: 732  EFFFHAMGGREGLIDTAVKTSETGYIQRRLIKAMEDVMVQYDNTTRNSMGEIIQFLYGED 791

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+ G  +E Q+L +L   +    K++ +   D +  E     +L      +I     +  
Sbjct: 792  GMAGEFIEGQRLESLELDDKEMEKKFKMNLDDRNFGEG----FLDPDVAAEIRGSAVIRH 847

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L KE+ QL KDR+ LR E+ ++GE  + L VN++RLIWNA++I+ V  +  SDL
Sbjct: 848  QLDKEYEQLLKDREQLRSEIVQSGEGAVHLPVNLKRLIWNAQKIYKVDTSKPSDL 902

[81][TOP]
>UniRef100_A4S3M0 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901
            RepID=A4S3M0_OSTLU
          Length = 1646

 Score =  172 bits (437), Expect = 1e-41
 Identities = 89/174 (51%), Positives = 124/174 (71%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMEDV+VKYDGTVRNS   VIQFLYGED
Sbjct: 806  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDVVVKYDGTVRNSVGDVIQFLYGED 865

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D  ++E Q + TLR +   F  ++H+ +PD+      N+ +LS+   +++     V E
Sbjct: 866  GMDATMIESQSIDTLRFSVKEFAAKFHI-DPDV---PGFNNGWLSEEQASELAHTAKVRE 921

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSD 524
            +L  EW +L++DR  LR  +  TG+  + L VN++R++WNA++ + + + D  +
Sbjct: 922  ILDAEWDRLQRDRVELR-TICPTGDPHVHLPVNMKRILWNAQKQYGLYRPDSGE 974

[82][TOP]
>UniRef100_Q6E223 RNA polymerase 2 (Fragment) n=1 Tax=Caenorhabditis sp. DF5070
           RepID=Q6E223_9PELO
          Length = 606

 Score =  172 bits (437), Expect = 1e-41
 Identities = 88/167 (52%), Positives = 115/167 (68%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + ++Q  YGED
Sbjct: 27  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMVQLRYGED 86

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + T++  +  F + +     D    E     Y S+  + D++   D  E
Sbjct: 87  GLDGMWVENQSMPTMKPNDAVFERDFRTDLTD----ELFMKKYYSEDVIRDLNESPDAIE 142

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDV 503
            +  EW QL++DR  LR ++F  G+AK+ L  N++RL+WNA++IF V
Sbjct: 143 KVESEWTQLEEDRRLLR-KIFPKGDAKIVLPCNLQRLMWNAQKIFKV 188

[83][TOP]
>UniRef100_B4YT43 DNA-directed RNA polymerase (Fragment) n=1 Tax=Laccophilus pictus
           RepID=B4YT43_9DYTI
          Length = 562

 Score =  172 bits (437), Expect = 1e-41
 Identities = 92/179 (51%), Positives = 120/179 (67%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 297 EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGED 356

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDI----HSGG 350
           GL G +VE Q   T++ +N +F K+Y          ++SN  YL +    D+       G
Sbjct: 357 GLCGEMVELQYFPTIKLSNKAFEKKYRF--------DASNEKYLRRVFNEDVIKLMMGSG 408

Query: 351 DVTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
           DV   L  EW QL+KDR+ LR ++F +GE+ + L  N++R+IWN ++IF + +   +DL
Sbjct: 409 DVISELELEWDQLQKDREALR-QIFPSGESNVVLPCNLQRMIWNVQKIFHINKRAPTDL 466

[84][TOP]
>UniRef100_Q2TUN8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Taxus canadensis
            RepID=Q2TUN8_TAXCA
          Length = 1013

 Score =  172 bits (436), Expect = 1e-41
 Identities = 92/175 (52%), Positives = 117/175 (66%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMED+MVKYDGTVRNS   VIQFLYGED
Sbjct: 752  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED 811

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   +E QKL +L+     F   Y   E D   QE+ N  Y+    ++D+ +  +   
Sbjct: 812  GMDAVWIESQKLDSLKMKKKEFENVYRY-EID---QENWNPSYMLPEHVDDLKTIREFQN 867

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +   E  +L+ DR  L  E+  TG+   P+ VN++RLIWNA++ F +    RSD+
Sbjct: 868  VFDAELQKLESDRRQLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKIDPRKRSDM 922

[85][TOP]
>UniRef100_O04144 DNA-directed RNA polymerase (Fragment) n=1 Tax=Spirogyra sp.
           RepID=O04144_9VIRI
          Length = 613

 Score =  172 bits (436), Expect = 1e-41
 Identities = 93/177 (52%), Positives = 117/177 (66%), Gaps = 2/177 (1%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMEDVMVKYDGTVRNS   VIQFLYGED
Sbjct: 340 EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGED 399

Query: 183 GLDGALVEDQKLGTLRSTNDSF--TKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDV 356
           G+D   +E Q L +++    +F  T RY +       QE  +  Y+      D     + 
Sbjct: 400 GMDAVWIESQSLPSMKMNKSTFDATYRYEID------QEDWSPDYMDPQFAKDAKIVAEF 453

Query: 357 TELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +++  E  QL++DR  L  E+  TG++  PL VNI+RLIWNA++IF +     SD+
Sbjct: 454 RQVMDAEVLQLEQDRRTLGLEIAPTGDSSWPLPVNIKRLIWNAQKIFKIDLRKPSDM 510

[86][TOP]
>UniRef100_Q9BNE0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hadrurus arizonensis
           RepID=Q9BNE0_HADAR
          Length = 543

 Score =  172 bits (436), Expect = 1e-41
 Identities = 95/179 (53%), Positives = 119/179 (66%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VM  YDGTVRNS   VI   YGED
Sbjct: 295 EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMATYDGTVRNSVGQVISLRYGED 354

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDI--HSGGDV 356
           GLDG+ VE Q L TL+ +N +F +++          + SN  YL +    D+     G  
Sbjct: 355 GLDGSSVEFQSLPTLKPSNKAFERKFKF--------DPSNERYLRRIFTEDVVRELMGSA 406

Query: 357 TEL--LAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
           T L  L +EW +L+KDR  LR  +F TG++K+ L  N++R+IWNA++IF V     +DL
Sbjct: 407 TALSELEREWERLEKDRRVLR-SIFPTGDSKVVLPCNLQRMIWNAQKIFHVNLRSATDL 464

[87][TOP]
>UniRef100_Q6E224 DNA-directed RNA polymerase (Fragment) n=1 Tax=Caenorhabditis
           drosophilae RepID=Q6E224_9PELO
          Length = 633

 Score =  172 bits (436), Expect = 1e-41
 Identities = 88/167 (52%), Positives = 114/167 (68%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   ++Q  YGED
Sbjct: 43  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLGQMVQLRYGED 102

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + T++  +  F + +     D    E     Y S+  + D++   D  E
Sbjct: 103 GLDGMWVENQSMPTMKPNDAVFERDFRTDLTD----EVFMKKYYSEDVIRDLNESEDAIE 158

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDV 503
            +  EW QL++DR  LR ++F  G+AK+ L  N++RL+WNA++IF V
Sbjct: 159 KVESEWTQLEEDRRLLR-KIFPKGDAKIVLPCNLQRLMWNAQKIFKV 204

[88][TOP]
>UniRef100_Q23699 DNA-directed RNA polymerase (Fragment) n=1 Tax=Crassostrea gigas
            RepID=Q23699_CRAGI
          Length = 1340

 Score =  172 bits (436), Expect = 1e-41
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMVKYDGTVRN    ++Q  YGED
Sbjct: 746  EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVKYDGTVRNQVEQLVQLRYGED 805

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLD   VE Q + TL+ +N +F +++     +    E +    LS+  + D+        
Sbjct: 806  GLDATHVEFQTMPTLKPSNRAFERQFKFDATN----ERNMKKCLSEEVIKDLMGDALAVS 861

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +EW QL++DRD LR  +F TG++K+ L  N++R+IWNA++IF +  +  +DL
Sbjct: 862  QLDREWEQLREDRDILR-SIFPTGDSKVVLPCNLQRMIWNAQKIFRIDTHKPTDL 915

[89][TOP]
>UniRef100_O01376 DNA-directed RNA polymerase (Fragment) n=1 Tax=unidentified
           nematode RepID=O01376_9BILA
          Length = 633

 Score =  172 bits (436), Expect = 1e-41
 Identities = 87/167 (52%), Positives = 115/167 (68%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + ++Q  YGED
Sbjct: 40  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMVQLRYGED 99

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + T++  N  F + +     D    E+S     ++  + ++    +  E
Sbjct: 100 GLDGMWVENQSMPTMKPNNAVFERDFRTDLTDHRFLENS----YTEDVIRELQESSEAIE 155

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDV 503
            +  EWAQL +DR  LR ++F  G+AK+ L  N++RL+WNA++IF V
Sbjct: 156 KIESEWAQLSEDRRLLR-KIFPKGDAKIVLPCNLQRLMWNAQKIFKV 201

[90][TOP]
>UniRef100_A9QMF1 RNA polymerase 2 (Fragment) n=1 Tax=Pelodera punctata
           RepID=A9QMF1_9PELO
          Length = 605

 Score =  172 bits (436), Expect = 1e-41
 Identities = 92/175 (52%), Positives = 118/175 (67%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + +IQ  YGED
Sbjct: 21  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQLIQLRYGED 80

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE Q + T++ TN +F K++ L   D    E S     ++  + D+    +  +
Sbjct: 81  GLDGMWVESQFMPTMKLTNAAFEKQFKLELSD----ERSLRRIYTEDVVRDLLGSSNALQ 136

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +  EW QL++DR  LR ++F  G+ K+ L  N++RLIWNA++IF V     S L
Sbjct: 137 EVEAEWQQLEEDRRLLR-KIFPKGDHKVVLPCNLQRLIWNAQKIFKVETRKASSL 190

[91][TOP]
>UniRef100_Q0D054 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
            RepID=Q0D054_ASPTN
          Length = 1742

 Score =  172 bits (436), Expect = 1e-41
 Identities = 94/175 (53%), Positives = 122/175 (69%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQR+LVKA+E+VMVKYDGTVRNS   VIQF+YGED
Sbjct: 833  EFFFHAMAGREGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDVIQFVYGED 892

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDGA +E+Q++  ++ ++D F  R+ +   DL   E S  P + + A N+I    +V  
Sbjct: 893  GLDGAHIENQRVDIIKCSDDKFRDRFRV---DLMDPERSLGPEILEQA-NEIAGDVEVQR 948

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +EW QL KDR FLR  V K  E  + L +N++R++  A+  F +R+   SDL
Sbjct: 949  YLDEEWEQLLKDRAFLR-TVAKEDEEMMQLPINVQRILETARSTFRIREGTISDL 1002

[92][TOP]
>UniRef100_A1YIA8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Taphrina deformans
            RepID=A1YIA8_9ASCO
          Length = 1001

 Score =  172 bits (436), Expect = 1e-41
 Identities = 94/177 (53%), Positives = 124/177 (70%), Gaps = 2/177 (1%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQRRLVKA+EDV VKYDGTVRNS   +I F+YGED
Sbjct: 735  EFFFHAMAGREGLIDTAVKTAETGYIQRRLVKALEDVGVKYDGTVRNSLGDIINFVYGED 794

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYH--LTEPDLHLQESSNSPYLSQAALNDIHSGGDV 356
            GLD A VE Q L T+R +N +F + Y   +T+PD  +  S   P       +DI    +V
Sbjct: 795  GLDAASVEYQVLDTMRLSNAAFEEAYRVDVTDPDRTIPPSFFEPG------HDIDGDFEV 848

Query: 357  TELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             +LL +E+ +L +DR  L+  +F +G++  PL VN++R+I N+K+IF +  + R+DL
Sbjct: 849  QKLLDQEFKELSEDRRDLQTLIFPSGDSSWPLPVNLDRIILNSKQIFHIAPHRRTDL 905

[93][TOP]
>UniRef100_UPI000051A77E PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            isoform 2 n=1 Tax=Apis mellifera RepID=UPI000051A77E
          Length = 1422

 Score =  172 bits (435), Expect = 2e-41
 Identities = 91/179 (50%), Positives = 121/179 (67%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 827  EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGED 886

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYL----SQAALNDIHSGG 350
            GL G  VE Q L T++ +N +F K++          + +N  YL    ++  + ++   G
Sbjct: 887  GLCGETVEFQNLPTIKLSNKAFEKKFKF--------DPTNERYLRRIFNEDIVREMMGSG 938

Query: 351  DVTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +V   L +EW QL KDR  LR E+F +GE+K+ L  N++R+IWN ++IF + +   +DL
Sbjct: 939  EVISELEREWEQLNKDRAVLR-EIFPSGESKVVLPCNLQRMIWNVQKIFHINKRAPTDL 996

[94][TOP]
>UniRef100_Q2TUN5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ephedra viridis
            RepID=Q2TUN5_EPHVI
          Length = 1013

 Score =  172 bits (435), Expect = 2e-41
 Identities = 93/175 (53%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMED+MVKYD TVRNS   VIQFLYGED
Sbjct: 752  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDATVRNSLGDVIQFLYGED 811

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   +E QKL  L+     F + +   + +L  QE+ +  Y+     +DI +  +  +
Sbjct: 812  GMDAVRIESQKLDHLKMKKKEFDETF---KHELG-QENWHPTYMLPEMADDIKNISEFQD 867

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +L  E+ +L+ DR  L  E+  TGE   PL VN++RLIWNA++IF V     SD+
Sbjct: 868  VLVAEYKKLQLDRRQLGMEIAPTGENSWPLPVNLKRLIWNAQKIFKVDPRKTSDM 922

[95][TOP]
>UniRef100_Q010D7 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri
            RepID=Q010D7_OSTTA
          Length = 1673

 Score =  172 bits (435), Expect = 2e-41
 Identities = 92/163 (56%), Positives = 116/163 (71%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMEDV+VKYDGTVRNS   VIQFLYGED
Sbjct: 826  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDVVVKYDGTVRNSVGDVIQFLYGED 885

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D  ++E Q L TLR     F   + + +PD+      N  +LS    +D+     V E
Sbjct: 886  GMDATMIESQVLDTLRLGAKEFAAVFQI-DPDV---SGFNKGWLSNEQASDLAHSTKVRE 941

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKR 491
            ++  EW +L+KDR  LR +VF TG+  + L VN++R+IWNA++
Sbjct: 942  IIDAEWERLQKDRVELR-KVFPTGDPHVHLPVNMKRIIWNAQK 983

[96][TOP]
>UniRef100_Q6E232 RNA polymersae 2 (Fragment) n=1 Tax=Caenorhabditis sp. PS1010
           RepID=Q6E232_9PELO
          Length = 601

 Score =  172 bits (435), Expect = 2e-41
 Identities = 87/167 (52%), Positives = 115/167 (68%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + ++Q  YGED
Sbjct: 27  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMVQLRYGED 86

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + T++  N  F + +     D    E+S     ++  + ++    +  E
Sbjct: 87  GLDGMWVENQSMPTMKPNNAVFERDFRTDLTDDRFLENS----YTEDVIRELQESSEAIE 142

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDV 503
            +  EWAQL +DR  LR ++F  G+AK+ L  N++RL+WNA++IF V
Sbjct: 143 KIESEWAQLSEDRRLLR-KIFPKGDAKIVLPCNLQRLMWNAQKIFKV 188

[97][TOP]
>UniRef100_A9QMF9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhabditis rainai
           RepID=A9QMF9_9BILA
          Length = 618

 Score =  172 bits (435), Expect = 2e-41
 Identities = 91/177 (51%), Positives = 119/177 (67%), Gaps = 2/177 (1%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + ++Q  YGED
Sbjct: 33  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAXMVQLRYGED 92

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIH--SGGDV 356
           GLDG  VE+Q + T++  N  F + + L   D    E +   + ++  ++D+      D 
Sbjct: 93  GLDGMWVENQGMPTMKPNNVVFERNFKLDITD----EKTMKKFFTEDVIHDLQGPDSKDA 148

Query: 357 TELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            E +  EWAQL++DR  LR ++F TG AK+ L  N++RLIWN ++IF V     + L
Sbjct: 149 IETVEAEWAQLEEDRRLLR-KIFPTGNAKVVLPCNLQRLIWNXQKIFRVETRKPTSL 204

[98][TOP]
>UniRef100_C4R4Y0 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
            RepID=C4R4Y0_PICPG
          Length = 1743

 Score =  172 bits (435), Expect = 2e-41
 Identities = 95/175 (54%), Positives = 121/175 (69%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQRRLVKA+ED+MV YDGT RNS   +IQFLYGED
Sbjct: 813  EFFFHAMAGREGLIDTAVKTAETGYIQRRLVKALEDIMVHYDGTTRNSLGDIIQFLYGED 872

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDG  VE Q + T+  ++ +F KRY++   DL  +++S  P + + A  DI    ++ +
Sbjct: 873  GLDGTQVERQTIDTIPGSDKAFHKRYYV---DLMDEKNSIKPDVIEYAA-DILGDVELQK 928

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L  E+ QL  DR FLR  VF  G+   PL VN+ R+I NA++IF + +   SDL
Sbjct: 929  ELNSEYEQLVSDRKFLREIVFVNGDHNWPLPVNLRRIIQNAQQIFHLDRAKASDL 983

[99][TOP]
>UniRef100_C0NEY2 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
           RepID=C0NEY2_AJECG
          Length = 1234

 Score =  172 bits (435), Expect = 2e-41
 Identities = 93/175 (53%), Positives = 125/175 (71%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAM GREGLIDTAVKTAETGYIQR+LVKA+E+VMVKYDGTVRNS   V+QFLYGED
Sbjct: 322 EFFFHAMAGREGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDVVQFLYGED 381

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDGA +E+Q++  ++ +++ F  RY +   DL   + + SP + + A  +I    +V +
Sbjct: 382 GLDGAHIENQRVDIIKCSDERFRDRYRV---DLMDPDRTLSPNVLEQA-TEIAGDIEVQK 437

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            L +EW QL KDR F+R  V K  E  + L +N++R++ +AK IF +R+   SDL
Sbjct: 438 YLDEEWEQLLKDRAFMR-SVAKEDEEMMQLPINVQRILESAKTIFRIREGAISDL 491

[100][TOP]
>UniRef100_A6QYA7 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
            RepID=A6QYA7_AJECN
          Length = 1747

 Score =  172 bits (435), Expect = 2e-41
 Identities = 93/175 (53%), Positives = 125/175 (71%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQR+LVKA+E+VMVKYDGTVRNS   V+QFLYGED
Sbjct: 835  EFFFHAMAGREGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDVVQFLYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDGA +E+Q++  ++ +++ F  RY +   DL   + + SP + + A  +I    +V +
Sbjct: 895  GLDGAHIENQRVDIIKCSDERFRDRYRV---DLMDPDRTLSPNVLEQA-TEIAGDIEVQK 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +EW QL KDR F+R  V K  E  + L +N++R++ +AK IF +R+   SDL
Sbjct: 951  YLDEEWEQLLKDRAFMR-SVAKEDEEMMQLPINVQRILESAKTIFRIREGAISDL 1004

[101][TOP]
>UniRef100_A1YIB5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mucor hiemalis
            RepID=A1YIB5_9FUNG
          Length = 1009

 Score =  172 bits (435), Expect = 2e-41
 Identities = 92/175 (52%), Positives = 115/175 (65%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKA+EDVMVKYDGTVRNS   +I+F YGED
Sbjct: 743  EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDVMVKYDGTVRNSLGDIIEFCYGED 802

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   VE QK  +L+   + F KRY +   +   ++ +    LS   L  I        
Sbjct: 803  GMDALSVESQKFFSLKCNQEEFEKRYKIDVMNKGFKKGA----LSYNVLKSIEGSETAQA 858

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L  E+ QL +DR+ LR  +FK G+ K PL VN+ RLI N+++IF +     SD+
Sbjct: 859  YLDHEFYQLTEDRNKLRTNIFKNGDDKWPLPVNLTRLITNSQQIFHIDPRKPSDI 913

[102][TOP]
>UniRef100_Q6E231 RNA polymerase 2 (Fragment) n=1 Tax=Caenorhabditis brenneri
           RepID=Q6E231_CAEBE
          Length = 596

 Score =  171 bits (434), Expect = 2e-41
 Identities = 88/167 (52%), Positives = 115/167 (68%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + ++Q  YGED
Sbjct: 19  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMVQLRYGED 78

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + T++  N  F + + +   D          + S+  + +I    D   
Sbjct: 79  GLDGMWVENQNMPTMKPNNAVFERDFRMELTDTKFLRK----HYSEDVVREIQESLDGIS 134

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDV 503
           L+  EW+QL++DR  LR ++F  G+AK+ L  N++RLIWNA++IF V
Sbjct: 135 LVESEWSQLEEDRRLLR-KIFPRGDAKIVLPCNLQRLIWNAQKIFKV 180

[103][TOP]
>UniRef100_Q6E227 RNA polymerase 2 (Fragment) n=1 Tax=Caenorhabditis japonica
           RepID=Q6E227_CAEJA
          Length = 608

 Score =  171 bits (434), Expect = 2e-41
 Identities = 88/167 (52%), Positives = 115/167 (68%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + ++Q  YGED
Sbjct: 27  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMVQLRYGED 86

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + T++  N  F + + +   D      +     S+  + +I    D   
Sbjct: 87  GLDGMWVENQNMPTMKPNNAVFERDFRMDLTDNRFLRKN----YSEDVVREIQESEDGIS 142

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDV 503
           L+  EW+QL++DR  LR ++F  G+AK+ L  N++RLIWNA++IF V
Sbjct: 143 LVESEWSQLEEDRRLLR-KIFPRGDAKIVLPCNLQRLIWNAQKIFKV 188

[104][TOP]
>UniRef100_C8Z6G2 Rpo21p n=1 Tax=Saccharomyces cerevisiae EC1118 RepID=C8Z6G2_YEAST
          Length = 1733

 Score =  171 bits (434), Expect = 2e-41
 Identities = 97/175 (55%), Positives = 121/175 (69%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKA+ED+MV YD T RNS  +VIQF+YGED
Sbjct: 812  EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDIMVHYDNTTRNSLGNVIQFIYGED 871

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D A +E Q L T+  ++ +F KRY +   DL   + +  P L ++  ++I     +  
Sbjct: 872  GMDAAHIEKQSLDTIGGSDAAFEKRYRV---DLLNTDHTLDPSLLESG-SEILGDLKLQV 927

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            LL +E+ QL KDR FLR EVF  GEA  PL VNI R+I NA++ F +     SDL
Sbjct: 928  LLDEEYKQLVKDRKFLR-EVFVDGEANWPLPVNIRRIIQNAQQTFHIDHTKPSDL 981

[105][TOP]
>UniRef100_C7GKZ2 Rpo21p n=2 Tax=Saccharomyces cerevisiae RepID=C7GKZ2_YEAS2
          Length = 1733

 Score =  171 bits (434), Expect = 2e-41
 Identities = 97/175 (55%), Positives = 121/175 (69%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKA+ED+MV YD T RNS  +VIQF+YGED
Sbjct: 812  EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDIMVHYDNTTRNSLGNVIQFIYGED 871

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D A +E Q L T+  ++ +F KRY +   DL   + +  P L ++  ++I     +  
Sbjct: 872  GMDAAHIEKQSLDTIGGSDAAFEKRYRV---DLLNTDHTLDPSLLESG-SEILGDLKLQV 927

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            LL +E+ QL KDR FLR EVF  GEA  PL VNI R+I NA++ F +     SDL
Sbjct: 928  LLDEEYKQLVKDRKFLR-EVFVDGEANWPLPVNIRRIIQNAQQTFHIDHTKPSDL 981

[106][TOP]
>UniRef100_B3LH31 DNA-directed RNA polymerase n=1 Tax=Saccharomyces cerevisiae RM11-1a
            RepID=B3LH31_YEAS1
          Length = 1733

 Score =  171 bits (434), Expect = 2e-41
 Identities = 97/175 (55%), Positives = 121/175 (69%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKA+ED+MV YD T RNS  +VIQF+YGED
Sbjct: 812  EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDIMVHYDNTTRNSLGNVIQFIYGED 871

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D A +E Q L T+  ++ +F KRY +   DL   + +  P L ++  ++I     +  
Sbjct: 872  GMDAAHIEKQSLDTIGGSDAAFEKRYRV---DLLNTDHTLDPSLLESG-SEILGDLKLQV 927

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            LL +E+ QL KDR FLR EVF  GEA  PL VNI R+I NA++ F +     SDL
Sbjct: 928  LLDEEYKQLVKDRKFLR-EVFVDGEANWPLPVNIRRIIQNAQQTFHIDHTKPSDL 981

[107][TOP]
>UniRef100_B0XMU6 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus
            RepID=B0XMU6_ASPFC
          Length = 1750

 Score =  171 bits (434), Expect = 2e-41
 Identities = 93/175 (53%), Positives = 123/175 (70%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQR+LVKA+E+VMVKYDGTVRNS   VIQF+YGED
Sbjct: 832  EFFFHAMAGREGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDVIQFIYGED 891

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDGA +E+Q++  +R +++ F +R+ +   DL   E S  P + + A N+I    +V  
Sbjct: 892  GLDGAHIENQRVDVIRCSDEKFRERFRV---DLMDPERSLGPEVLEQA-NEIAGDVEVQR 947

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +EW QL KDR FLR  V K  +  + L +N++R++  A+  F +R+   SDL
Sbjct: 948  YLDEEWEQLLKDRAFLR-TVAKEDDEMMQLPINVQRILETARSTFRIREGAISDL 1001

[108][TOP]
>UniRef100_P04050 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Saccharomyces
            cerevisiae RepID=RPB1_YEAST
          Length = 1733

 Score =  171 bits (434), Expect = 2e-41
 Identities = 97/175 (55%), Positives = 121/175 (69%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKA+ED+MV YD T RNS  +VIQF+YGED
Sbjct: 812  EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDIMVHYDNTTRNSLGNVIQFIYGED 871

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D A +E Q L T+  ++ +F KRY +   DL   + +  P L ++  ++I     +  
Sbjct: 872  GMDAAHIEKQSLDTIGGSDAAFEKRYRV---DLLNTDHTLDPSLLESG-SEILGDLKLQV 927

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            LL +E+ QL KDR FLR EVF  GEA  PL VNI R+I NA++ F +     SDL
Sbjct: 928  LLDEEYKQLVKDRKFLR-EVFVDGEANWPLPVNIRRIIQNAQQTFHIDHTKPSDL 981

[109][TOP]
>UniRef100_A9QMQ9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Caenorhabditis sp.
           JU727 RepID=A9QMQ9_9PELO
          Length = 620

 Score =  171 bits (433), Expect = 3e-41
 Identities = 88/167 (52%), Positives = 115/167 (68%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + ++Q  YGED
Sbjct: 44  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMVQLRYGED 103

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + T++  N  F + + +   D      +     S+  + +I    D   
Sbjct: 104 GLDGMWVENQNMPTMKPNNAVFERDFRMDLTDNKFLRKN----YSEDVVREIQESTDGIS 159

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDV 503
           L+  EW+QL++DR  LR ++F  G+AK+ L  N++RLIWNA++IF V
Sbjct: 160 LVESEWSQLEEDRRLLR-KIFPRGDAKIVLPCNLQRLIWNAQKIFKV 205

[110][TOP]
>UniRef100_A9QMG4 RNA polymerase 2 (Fragment) n=1 Tax=Pelodera strongyloides
           dermatitica RepID=A9QMG4_9PELO
          Length = 478

 Score =  171 bits (433), Expect = 3e-41
 Identities = 91/175 (52%), Positives = 119/175 (68%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRN+ + +IQ  YGED
Sbjct: 26  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNALAQLIQLRYGED 85

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + T++ TN +F K++ L   D    E S     ++  + D+    +  +
Sbjct: 86  GLDGMWVENQFMPTMKLTNAAFEKQFKLELSD----ERSLRRIYTEDVVRDLLGSSNALQ 141

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +  EW QL++DR  LR ++F  G+ K+ L  N++RLIWNA++IF V     S L
Sbjct: 142 EVEAEWQQLEEDRRLLR-KIFPKGDHKVVLPCNLQRLIWNAQKIFKVETRKPSSL 195

[111][TOP]
>UniRef100_A9QMF0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pelodera
           strongyloides dermatitica RepID=A9QMF0_9PELO
          Length = 633

 Score =  171 bits (433), Expect = 3e-41
 Identities = 91/175 (52%), Positives = 119/175 (68%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRN+ + +IQ  YGED
Sbjct: 45  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNALAQLIQLRYGED 104

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + T++ TN +F K++ L   D    E S     ++  + D+    +  +
Sbjct: 105 GLDGMWVENQFMPTMKLTNAAFEKQFKLELSD----ERSLRRIYTEDVVRDLLGSSNALQ 160

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +  EW QL++DR  LR ++F  G+ K+ L  N++RLIWNA++IF V     S L
Sbjct: 161 EVEAEWQQLEEDRRLLR-KIFPKGDHKVVLPCNLQRLIWNAQKIFKVETRKPSSL 214

[112][TOP]
>UniRef100_Q2PYR5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mortierella
            verticillata RepID=Q2PYR5_9FUNG
          Length = 1016

 Score =  171 bits (433), Expect = 3e-41
 Identities = 96/182 (52%), Positives = 119/182 (65%), Gaps = 7/182 (3%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKA+EDVMVKYDGTVRNS   VIQF YGED
Sbjct: 744  EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDVMVKYDGTVRNSLGHVIQFCYGED 803

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYH--LTEPDLHLQESS-NSPYLSQAALNDIHSG-- 347
            G+D   VE Q L T++ +N +F K+Y   LT+     +  + +     Q A  D  +   
Sbjct: 804  GMDACHVEKQPLDTVKMSNAAFEKKYRIDLTDKSKSFKNGTLDYNVFKQIAEADEEAAKR 863

Query: 348  --GDVTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRS 521
               D+  LL +E+ QL +DR  LR+ +F  G+   P+  NI R IWN+K++F V     S
Sbjct: 864  GEPDMQTLLEQEFKQLDEDRHLLRNYIFTEGDNSWPMPTNIRRYIWNSKQMFHVDHKRPS 923

Query: 522  DL 527
            DL
Sbjct: 924  DL 925

[113][TOP]
>UniRef100_C3U0B7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Eremascus albus
            RepID=C3U0B7_9EURO
          Length = 994

 Score =  171 bits (433), Expect = 3e-41
 Identities = 95/175 (54%), Positives = 122/175 (69%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQR+LVKA+E+VMVKYDGTVRNS   V+QFLYGED
Sbjct: 735  EFFFHAMAGREGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDVVQFLYGED 794

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDGA +E+Q++  ++ ++  F  RY +   DL   E + SP L + A N+I    +V  
Sbjct: 795  GLDGAHIENQRVDVIKCSDAKFRDRYRV---DLMDPERTISPDLLEQA-NEITGDIEVQR 850

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +EW QL+KDR FLR    K  E  + L +NI+R++ +AK    +R+   SDL
Sbjct: 851  YLDEEWEQLQKDRAFLR-SATKEDEEMMQLPINIQRILESAKSTVRIREGAISDL 904

[114][TOP]
>UniRef100_C3U0B1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Arachniotus littoralis
            RepID=C3U0B1_9EURO
          Length = 992

 Score =  171 bits (433), Expect = 3e-41
 Identities = 96/176 (54%), Positives = 123/176 (69%), Gaps = 1/176 (0%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQR+LVKA+E+VMVKYDGTVRNS   +IQFLYGED
Sbjct: 737  EFFFHAMAGREGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDIIQFLYGED 796

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESS-NSPYLSQAALNDIHSGGDVT 359
            GLDGA +E+Q++  +R +++ F  RY +   DL   ES+ +S  L QA   +I    +V 
Sbjct: 797  GLDGAHIENQRVDVIRCSDEQFRNRYRI---DLMDPESTLSSDILEQA--GEIAGDMEVQ 851

Query: 360  ELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            + L +EW QL KDR FLR    K  E  + L +N++R++ +AK  F +R    SDL
Sbjct: 852  KHLDEEWEQLLKDRAFLR-TAAKEDEEMMQLPINVQRILESAKTAFRIRDGTISDL 906

[115][TOP]
>UniRef100_A1D1U9 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
            RepID=A1D1U9_NEOFI
          Length = 1750

 Score =  171 bits (433), Expect = 3e-41
 Identities = 93/175 (53%), Positives = 123/175 (70%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQR+LVKA+E+VMVKYDGTVRNS   VIQF+YGED
Sbjct: 832  EFFFHAMAGREGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDVIQFIYGED 891

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDGA +E+Q++  +R +++ F +R+ +   DL   E S  P + + A N+I    +V  
Sbjct: 892  GLDGAHIENQRVDIIRCSDEKFRERFRV---DLMDPERSLGPEVLEQA-NEIAGDVEVQR 947

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +EW QL KDR FLR  V K  +  + L +N++R++  A+  F +R+   SDL
Sbjct: 948  YLDEEWEQLLKDRAFLR-TVAKEDDEMMQLPINVQRILETARSTFRIREGAISDL 1001

[116][TOP]
>UniRef100_P35084 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Dictyostelium
            discoideum RepID=RPB1_DICDI
          Length = 1727

 Score =  171 bits (433), Expect = 3e-41
 Identities = 89/177 (50%), Positives = 117/177 (66%), Gaps = 2/177 (1%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMEDV +KYD TVRNS   VIQF YGED
Sbjct: 821  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDVSIKYDATVRNSLGDVIQFAYGED 880

Query: 183  GLDGALVEDQKLGTLRSTNDSFTK--RYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDV 356
            G+DG  VE+Q + +LR  N    +  R+ + +PD          ++    +  + +    
Sbjct: 881  GIDGCFVENQSIDSLRKDNTELERMYRHQVDKPDY------GDGWMDPLVIEHVRNDSLT 934

Query: 357  TELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             + L KE+ ++K DR  LR+E+  +GEA  PL VN+ RLI NA+++F++     SDL
Sbjct: 935  RDTLEKEFERIKSDRSLLRNEIIPSGEANWPLPVNLRRLINNAQKLFNIDIRRVSDL 991

[117][TOP]
>UniRef100_P16356 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
            elegans RepID=RPB1_CAEEL
          Length = 1852

 Score =  171 bits (433), Expect = 3e-41
 Identities = 88/167 (52%), Positives = 115/167 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + ++Q  YGED
Sbjct: 825  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMVQLRYGED 884

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDG  VE+Q + T++  N  F + + +   D      +     S+  + +I    D   
Sbjct: 885  GLDGMWVENQNMPTMKPNNAVFERDFRMDLTDNKFLRKN----YSEDVVREIQESEDGIS 940

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDV 503
            L+  EW+QL++DR  LR ++F  G+AK+ L  N++RLIWNA++IF V
Sbjct: 941  LVESEWSQLEEDRRLLR-KIFPRGDAKIVLPCNLQRLIWNAQKIFKV 986

[118][TOP]
>UniRef100_P35074 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
            briggsae RepID=RPB1_CAEBR
          Length = 1853

 Score =  171 bits (433), Expect = 3e-41
 Identities = 88/167 (52%), Positives = 115/167 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + ++Q  YGED
Sbjct: 829  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMVQLRYGED 888

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDG  VE+Q + T++  N  F + + +   D      +     S+  + +I    D   
Sbjct: 889  GLDGMWVENQNMPTMKPNNAVFERDFRMDLTDNKFLRKN----YSEDVVREIQEAQDGIS 944

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDV 503
            L+  EW+QL++DR  LR ++F  G+AK+ L  N++RLIWNA++IF V
Sbjct: 945  LVESEWSQLEEDRRLLR-KIFPRGDAKIVLPCNLQRLIWNAQKIFKV 990

[119][TOP]
>UniRef100_Q2TUN9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Thuja occidentalis
            RepID=Q2TUN9_THUOC
          Length = 1013

 Score =  171 bits (432), Expect = 4e-41
 Identities = 91/175 (52%), Positives = 117/175 (66%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMED+MVKYDGTVRNS   VIQFLYGED
Sbjct: 752  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED 811

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   +E QKL +L+     F   Y   E D   QE+ N  Y+    ++D+ +  +   
Sbjct: 812  GMDAVWIESQKLDSLKMKRKEFENVYRY-EID---QENWNPSYMLPEHVDDLKTIREFQN 867

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +   E  +L+ DR  L  E+  +G+   P+ VN++RLIWNA++ F +    RSD+
Sbjct: 868  VFDAELQKLESDRRQLGTEIAPSGDNSWPMPVNLKRLIWNAQKTFKIDPRKRSDM 922

[120][TOP]
>UniRef100_A9QMG7 RNA polymerase 2 (Fragment) n=1 Tax=Distolabrellus veechi
           RepID=A9QMG7_9BILA
          Length = 583

 Score =  171 bits (432), Expect = 4e-41
 Identities = 94/175 (53%), Positives = 120/175 (68%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + +IQ  YGED
Sbjct: 27  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMIQLRYGED 86

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE Q + T++ TN +F K++ L   DL  +++    Y      N + S   + E
Sbjct: 87  GLDGTWVEGQFMPTMKLTNAAFEKQFKL---DLSDEKALRRGYSEDIVRNLLGSSTALKE 143

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            + +EW QL++DR  LR ++F  G+ K+ L  N++RLIWNA++IF V     S L
Sbjct: 144 -VEEEWQQLEEDRRLLR-KIFPKGDNKVVLPCNLQRLIWNAQKIFKVETRKPSSL 196

[121][TOP]
>UniRef100_Q2PYR0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Boothiomyces
            macroporosum RepID=Q2PYR0_9FUNG
          Length = 999

 Score =  171 bits (432), Expect = 4e-41
 Identities = 94/178 (52%), Positives = 121/178 (67%), Gaps = 3/178 (1%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKA+ED  VKYDGTVRNS   +IQF YGED
Sbjct: 736  EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDATVKYDGTVRNSLGDIIQFSYGED 795

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYH--LTEPDLHLQESSNSPYLSQAALNDIHSGGDV 356
            G+DGA +E QKL ++  ++ +F K+Y   ++EP +    S       Q+  ND+ +    
Sbjct: 796  GMDGARLEKQKLPSMTMSDAAFKKKYRIDISEPQVFKPGS-----CEQSTYNDLINNPAS 850

Query: 357  TELLAKEWAQLKKDRDFLRHEVFKTGEA-KLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             ++L +E+ QL KDR  LR+ +FK     K  L VN+ERLIWNA   F + ++  +DL
Sbjct: 851  QDILDREYNQLLKDRATLRNVIFKNSAIDKWTLPVNLERLIWNACHTFGIDRSKPTDL 908

[122][TOP]
>UniRef100_C3U0B2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Arachnomyces glareosus
            RepID=C3U0B2_9EURO
          Length = 993

 Score =  171 bits (432), Expect = 4e-41
 Identities = 91/175 (52%), Positives = 124/175 (70%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQR+LVKA+E++MVKYDGTVRNS   V+QFLYGED
Sbjct: 734  EFFFHAMAGREGLIDTAVKTAETGYIQRKLVKALEEIMVKYDGTVRNSLGDVVQFLYGED 793

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDGA +E+Q++  ++ +++ F +R+ +   DL   E S  P + + A  +I    +V +
Sbjct: 794  GLDGAHIENQRVDIIKCSDEKFYERFRV---DLMDPERSLGPEVLEQA-TEIAGDVEVQK 849

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +EW QL+KDR FLR  V    E  + L +N++R++ +AK  F +R  + SDL
Sbjct: 850  YLDEEWEQLQKDRTFLR-SVANQDEEMMQLPINVQRILESAKTTFRIRDGNISDL 903

[123][TOP]
>UniRef100_Q9U5F6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Eptatretus burgeri
           RepID=Q9U5F6_EPTBU
          Length = 595

 Score =  170 bits (431), Expect = 5e-41
 Identities = 88/175 (50%), Positives = 120/175 (68%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYDGTVRN+ + VIQ  YGED
Sbjct: 334 EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDGTVRNATNQVIQLRYGED 393

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GL    VE Q L TL+ +N +F K++       +  E +    L +  ++++ S   +  
Sbjct: 394 GLAAEHVEFQSLATLKPSNKAFEKKFKFD----YTNERALLRCLHEDVVSEVMSSAHIQN 449

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            L +E+ Q++ DR+ LR  VF TG++K+ L  N++R+IWNA++IF +     +DL
Sbjct: 450 CLEREFEQIRDDREVLR-AVFPTGDSKVVLPCNLQRMIWNAQKIFHINTRSSTDL 503

[124][TOP]
>UniRef100_B4YT37 DNA-directed RNA polymerase (Fragment) n=1 Tax=Scaphinotus petersi
           RepID=B4YT37_9CARA
          Length = 369

 Score =  170 bits (431), Expect = 5e-41
 Identities = 90/179 (50%), Positives = 121/179 (67%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EF+F AMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 104 EFYFPAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGED 163

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYL----SQAALNDIHSGG 350
           GL G +VE Q L T++ +N +F K++          + SN  YL    ++  +  +   G
Sbjct: 164 GLCGEMVEFQTLPTVKLSNKAFEKKFRF--------DPSNERYLRRIFNEDIIRQLMGSG 215

Query: 351 DVTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
           DV   L +EW QL +DR+ LR ++F +GE+K+ L  N++R+IWN ++IF + +   +DL
Sbjct: 216 DVISELEREWEQLSRDREALR-QIFPSGESKVVLPCNLQRMIWNVQKIFHINKRAPTDL 273

[125][TOP]
>UniRef100_A9QMG1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Oscheius
           dolichuroides RepID=A9QMG1_9BILA
          Length = 629

 Score =  170 bits (431), Expect = 5e-41
 Identities = 89/171 (52%), Positives = 116/171 (67%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   ++Q  YGE 
Sbjct: 47  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSIGQMVQLRYGEA 106

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + T + +N  F + + L   D    E +     ++  + D+    D  E
Sbjct: 107 GLDGMWVENQVMPTQKPSNALFERDFKLDLTD----EKTMKKCYTEDLIRDLQGSPDAIE 162

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQND 515
            +  EWAQL++DR  LR +++ TGE+K  L  N++RLIWNA++IF V + +
Sbjct: 163 EVENEWAQLEEDRRLLR-KIYATGESKCVLPCNLQRLIWNAQKIFHVEKRE 212

[126][TOP]
>UniRef100_Q9PTX4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Lethenteron
           reissneri RepID=Q9PTX4_LAMRE
          Length = 595

 Score =  170 bits (430), Expect = 6e-41
 Identities = 91/175 (52%), Positives = 117/175 (66%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYDGTVRN  + VIQ  YGED
Sbjct: 334 EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDGTVRNGINQVIQLRYGED 393

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GL    VE Q L TL+ ++ +F K+Y          E +    L +  +NDI S   +  
Sbjct: 394 GLAAEHVEFQNLSTLKPSDKAFEKKYKFD----FANERAMRRCLQEEVVNDIMSNAHIQN 449

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            L KE+ +++ DRD LR  VF TG++K+ L  N+ R+IWNA++IF +     +D+
Sbjct: 450 ELDKEFDRVRSDRDTLR-SVFPTGDSKVVLPCNLMRMIWNAQKIFHINTRQPTDI 503

[127][TOP]
>UniRef100_B7SNX4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pisum sativum
            RepID=B7SNX4_PEA
          Length = 1010

 Score =  170 bits (430), Expect = 6e-41
 Identities = 90/175 (51%), Positives = 115/175 (65%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMED+MVKYDGTVRNS   VIQFLYGED
Sbjct: 749  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED 808

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   +E QKL +L+     F + +     D    E+    Y+ +  + D+ +  +   
Sbjct: 809  GMDAVWIETQKLDSLKMKKTDFDRAFRYEFDD----ENWKPTYMLEEPVEDLKTIREFRN 864

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +   E  +L  DR  L  E+  TG++ LPL VN++RLIWNA++ F V     SD+
Sbjct: 865  VFEAEVQKLDADRFQLATEIATTGDSSLPLPVNLKRLIWNAQKTFKVDFRRPSDM 919

[128][TOP]
>UniRef100_A2QAT7 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
            RepID=A2QAT7_ASPNC
          Length = 1747

 Score =  170 bits (430), Expect = 6e-41
 Identities = 91/175 (52%), Positives = 123/175 (70%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQR+LVKA+E+VMVKYDGTVRNS   +IQF+YGED
Sbjct: 831  EFFFHAMAGREGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDIIQFIYGED 890

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDGA +E+Q++  ++ ++D F +R+ +   DL   E +  P + + A N+I    +V  
Sbjct: 891  GLDGAHIENQRVDIIKCSDDKFRERFRV---DLMDPERTLGPEVLEQA-NEIAGDVEVQR 946

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +EW +L KDR FLR  V K  E  + L +N++R++  A+  F +R+   SDL
Sbjct: 947  HLDEEWEELLKDRAFLR-SVAKEDEEMMQLPINVQRILETARTTFRIREGTISDL 1000

[129][TOP]
>UniRef100_A1YIA7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pichia kudriavzevii
            RepID=A1YIA7_ISSOR
          Length = 1647

 Score =  170 bits (430), Expect = 6e-41
 Identities = 92/175 (52%), Positives = 121/175 (69%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQRRL+KA+ED+MV YDGT RNS   VIQF+YGED
Sbjct: 735  EFFFHAMAGREGLIDTAVKTAETGYIQRRLLKALEDIMVHYDGTTRNSLGDVIQFIYGED 794

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLD   VE Q + T+  +N +F K+Y +   DL  ++ S  P + +   ++I     + +
Sbjct: 795  GLDATTVEKQTVDTIPGSNAAFEKKYRV---DLMDEKKSIRPDVVEYG-SEILGDIKLQK 850

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +L +E+ QL KDR++LR  VF  GE   PL VN+ R++ NA++IF V +   SDL
Sbjct: 851  ILDEEYEQLLKDREYLRTVVFPDGENNWPLPVNVRRIVQNAQQIFHVDRYKASDL 905

[130][TOP]
>UniRef100_Q71ET5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nymphaea odorata
            RepID=Q71ET5_NYMOD
          Length = 1013

 Score =  169 bits (429), Expect = 8e-41
 Identities = 90/175 (51%), Positives = 116/175 (66%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMED+MVKYDGTVRNS   VIQFLYGED
Sbjct: 752  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED 811

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   +E QKL +L+     F K +     D    E+ +  YL    + D+ +  ++ +
Sbjct: 812  GMDAVWIESQKLDSLKMKKSEFDKVFKFEFDD----ENWDPSYLQPDFVEDLKTIKELQD 867

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +   E  +L+ DR  L  E+  TG+   P+ VN++RLIWNA++ F V     SD+
Sbjct: 868  VFHAEVQKLETDRRQLATEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDM 922

[131][TOP]
>UniRef100_Q9NJK2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Polyxenus
           fasciculatus RepID=Q9NJK2_9MYRI
          Length = 751

 Score =  169 bits (429), Expect = 8e-41
 Identities = 89/175 (50%), Positives = 114/175 (65%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 486 EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVTYDGTVRNSVGQLIQLRYGED 545

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE Q L TL+ +N +F K++     +    E       ++  + D+        
Sbjct: 546 GLDGGAVEFQALPTLKPSNKAFEKKFRFDASN----ERQLRRVFNEEIVKDLFGSASAVG 601

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            L +EW  LK DR+ LR  +F  G++K+ L  N++R+IWNA++IF +     +DL
Sbjct: 602 ELEREWXTLKLDREVLR-TIFPKGDSKVVLPCNLQRMIWNAQKIFHINVRTPTDL 655

[132][TOP]
>UniRef100_A9QMS7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cuticonema vivipara
           RepID=A9QMS7_9BILA
          Length = 407

 Score =  169 bits (429), Expect = 8e-41
 Identities = 86/175 (49%), Positives = 118/175 (67%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 44  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLGQMIQLRYGED 103

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + +++  N+ F + + L   D    E +      +  + ++ +  +  +
Sbjct: 104 GLDGMWVENQTMPSMKPNNEVFEREFKLDLSD----ERTLRKLYKENVIRELQNSPEALQ 159

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            + +EW QL+ DR  LR ++F TG+A + L  N++R++WNA++IF V     +DL
Sbjct: 160 AVEEEWIQLESDRRLLR-KIFPTGKAGVVLPCNLDRMMWNARKIFHVETRKPTDL 213

[133][TOP]
>UniRef100_Q8MX26 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cercomonas sp. ATCC
            50319 RepID=Q8MX26_9EUKA
          Length = 1014

 Score =  169 bits (428), Expect = 1e-40
 Identities = 89/175 (50%), Positives = 113/175 (64%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVM+KYD TVRNS   +IQF YGED
Sbjct: 746  EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMIKYDATVRNSLGDIIQFAYGED 805

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+DG  +E QKL +L+  N  F K Y      L +       ++       +    +  +
Sbjct: 806  GMDGVYIEKQKLDSLKMDNARFLKTY-----QLDVSRPEQLDFMDAEVREHLLRTPEAHD 860

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L  E  QL+ DR  LR ++  TGE  + L VN++RLIWNA++ F V +  +S++
Sbjct: 861  ALETELKQLRDDRQLLRDKIQPTGEDMVHLPVNLKRLIWNAQKRFHVDRFSKSNI 915

[134][TOP]
>UniRef100_P90678 DNA-directed RNA polymerase (Fragment) n=1 Tax=Aduncospiculum
           halicti RepID=P90678_9BILA
          Length = 631

 Score =  169 bits (428), Expect = 1e-40
 Identities = 88/175 (50%), Positives = 117/175 (66%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAE GYIQRRL+KAME VMV YDGTVRNS + ++Q  YGED
Sbjct: 40  EFFFHAMGGREGLIDTAVKTAEAGYIQRRLIKAMESVMVCYDGTVRNSLAQMVQLRYGED 99

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + T++ +N  F + + +   D    E +     ++  + D+ S  +  +
Sbjct: 100 GLDGMWVENQTMPTMKPSNSLFERDFKMDLSD----ERTLKRLYTEDVIRDVQSSSESIK 155

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
               EW QL+ DR  LR ++F  G+AK+ L  N++RLIWNA++IF V     +DL
Sbjct: 156 EAELEWMQLQDDRQLLR-KIFPKGDAKIVLPCNLQRLIWNAQKIFHVETRKVTDL 209

[135][TOP]
>UniRef100_A9QMR2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhabditis blumi
           RepID=A9QMR2_9BILA
          Length = 284

 Score =  169 bits (428), Expect = 1e-40
 Identities = 92/176 (52%), Positives = 120/176 (68%), Gaps = 1/176 (0%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + +IQ  YGED
Sbjct: 44  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMIQLRYGED 103

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + T++ +N  F K++ L   D+  +++    Y          S  D  +
Sbjct: 104 GLDGMWVENQSMPTMKPSNAVFEKQFKL---DITDEKAIKKVYTEDVIHELQQSTSDALK 160

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTG-EAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            + +EWAQL++DR  LR ++F TG + K+ L  N++RLIWNA++IF V     + L
Sbjct: 161 KVEEEWAQLQEDRRLLR-KIFPTGDDRKVVLPCNLKRLIWNAQKIFHVETRKPTSL 215

[136][TOP]
>UniRef100_UPI000179338A PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
            (RNA polymerase II subunit B1) (DNA-directed RNA
            polymerase III largest subunit) n=1 Tax=Acyrthosiphon
            pisum RepID=UPI000179338A
          Length = 1862

 Score =  169 bits (427), Expect = 1e-40
 Identities = 88/176 (50%), Positives = 116/176 (65%), Gaps = 1/176 (0%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 828  EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGED 887

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHL-TEPDLHLQESSNSPYLSQAALNDIHSGGDVT 359
            GL G  VE Q + T+  ++  F   +      + H+++  N     +  L D+    D  
Sbjct: 888  GLSGEAVEFQSIATIEPSHKKFEAEFKFDVSNERHMRKIFN-----EDVLKDLTGSNDSV 942

Query: 360  ELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
              L +EW QL  DRD LR E+F +GE+K+ L  N++R+IWN ++IF + +  ++DL
Sbjct: 943  TELEREWEQLTTDRDTLR-EIFPSGESKVVLPCNLKRMIWNVQKIFHINKRGQTDL 997

[137][TOP]
>UniRef100_Q99368 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
           RepID=Q99368_SOYBN
          Length = 977

 Score =  169 bits (427), Expect = 1e-40
 Identities = 92/177 (51%), Positives = 115/177 (64%), Gaps = 2/177 (1%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMED+M+KYDGTVRNS   VIQFLYGED
Sbjct: 22  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMLKYDGTVRNSLGDVIQFLYGED 81

Query: 183 GLDGALVEDQKLGTLRSTNDSFTK--RYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDV 356
           G+D   +E QKL TL+     F +  RY   E      E+    Y+ Q  + D+ +  + 
Sbjct: 82  GMDAIWIETQKLDTLKMKKTEFDRVFRYEFDE------ENWKPNYMLQEPVEDLKTIREF 135

Query: 357 TELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             +   E  +L+ DR  L  E+   G+  LPL VN++RLIWNA++ F V     SD+
Sbjct: 136 RNVFEAEVQKLEADRHQLAIEIASNGDNSLPLPVNLKRLIWNAQKTFKVDFRRPSDM 192

[138][TOP]
>UniRef100_Q9NJJ7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Scolopendra
           polymorpha RepID=Q9NJJ7_SCOPO
          Length = 734

 Score =  169 bits (427), Expect = 1e-40
 Identities = 88/175 (50%), Positives = 118/175 (67%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME +M+ YDGTVRNS   +IQ  YGED
Sbjct: 486 EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESIMITYDGTVRNSVGQLIQLRYGED 545

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE Q L TL+ +N +F K++     D+   E       ++  + ++    ++  
Sbjct: 546 GLDGGAVEFQTLPTLKPSNKAFEKKFKF---DIS-NERQLKKIFNEDIVKELMGSANIVG 601

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            L KEW  LK+DR+ LR +VF  G++K+ L  N+ R+IWNA++IF +     +DL
Sbjct: 602 ELEKEWETLKRDRETLR-QVFPKGDSKVVLPCNLPRMIWNAQKIFHINTRVPTDL 655

[139][TOP]
>UniRef100_O02471 DNA-directed RNA polymerase (Fragment) n=1 Tax=Scutigera
           coleoptrata RepID=O02471_SCUCO
          Length = 582

 Score =  169 bits (427), Expect = 1e-40
 Identities = 88/175 (50%), Positives = 116/175 (66%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VM+ YDGTVRNS   +IQ  YGED
Sbjct: 334 EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMITYDGTVRNSVGQLIQLRYGED 393

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLD   VE Q L TL+ +N +F K++     D+   E       ++  + ++     +  
Sbjct: 394 GLDAGAVEFQFLPTLKPSNKAFEKKFRF---DIS-NERQLKKVFNEDVVKELMGSAHIVN 449

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            L +EW  L+KDR+ LR  VF  G++K+ L  N++R+IWNA++IF +     +DL
Sbjct: 450 ELEREWTMLQKDREALR-SVFPKGDSKIVLPCNLQRMIWNAQKIFHINLRSPTDL 503

[140][TOP]
>UniRef100_O02462 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pedetontus saltator
           RepID=O02462_9INSE
          Length = 722

 Score =  169 bits (427), Expect = 1e-40
 Identities = 89/179 (49%), Positives = 118/179 (65%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGT+RNS   +IQ  YGED
Sbjct: 474 EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTIRNSVGQLIQLRYGED 533

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYL----SQAALNDIHSGG 350
           GL G  VE Q   T++ +N  F K++          + +N  YL    ++  + ++   G
Sbjct: 534 GLAGETVEFQTQPTIKLSNKVFEKKFKF--------DPTNERYLRRIFNEDIMKELMGSG 585

Query: 351 DVTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
           +V   L +EW QL+KDRD LR ++F  G+ K  L  N++R+IWN ++IF + +   +DL
Sbjct: 586 EVISELEREWEQLQKDRDCLR-QIFPNGDNKTVLPCNLQRMIWNVQKIFHINKRATTDL 643

[141][TOP]
>UniRef100_Q6FQS9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
            RepID=Q6FQS9_CANGA
          Length = 1715

 Score =  169 bits (427), Expect = 1e-40
 Identities = 94/175 (53%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKA+ED+MV YDGT RNS  +VIQF+YGED
Sbjct: 812  EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDIMVHYDGTTRNSLGNVIQFIYGED 871

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   +E Q L T+  ++ +F +RY +   DL    +S  P L ++  ++I     V  
Sbjct: 872  GMDAGHIEKQSLDTMGGSDQAFERRYRI---DLLNTSNSLEPSLLESG-SEIIGDLKVQM 927

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ QL KDR FLR  +F  GE+  PL VNI R+I NA++ F +     SDL
Sbjct: 928  ALDEEYKQLVKDRRFLR-TIFSDGESSWPLPVNIRRIIQNAQQTFRIDHTKPSDL 981

[142][TOP]
>UniRef100_C8VQG7 DNA-directed RNA polymerase (EC 2.7.7.6)
            [Source:UniProtKB/TrEMBL;Acc:Q873Q6] n=2 Tax=Emericella
            nidulans RepID=C8VQG7_EMENI
          Length = 1745

 Score =  169 bits (427), Expect = 1e-40
 Identities = 93/175 (53%), Positives = 120/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQR+LVKA+E+VMVKYDGTVRNS   +IQF+YGED
Sbjct: 832  EFFFHAMAGREGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDIIQFIYGED 891

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDGA +E QK+  L  +++ F +R+ +   D  L  S     L QA  N+I    +V  
Sbjct: 892  GLDGAHIEHQKVDILTCSDEKFKERFRIDLMDPAL--SLGPDVLEQA--NEIAGDVEVQR 947

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +EW +L K R+ +RH V K  E  +PL +NI+R++  A+  F +R+   SDL
Sbjct: 948  YLDQEWEELLKAREVVRH-VAKGTEDSMPLPINIQRILEMARTTFRIREGTMSDL 1001

[143][TOP]
>UniRef100_C1H3Q4 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
            Pb01 RepID=C1H3Q4_PARBA
          Length = 1748

 Score =  169 bits (427), Expect = 1e-40
 Identities = 91/175 (52%), Positives = 124/175 (70%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQR+LVKA+E+VMVKYDGTVRNS   V+QFLYGED
Sbjct: 841  EFFFHAMAGREGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDVVQFLYGED 900

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDGA +E+Q++  ++ +++ F +R+ +   DL   E + SP + + A  +I    +V  
Sbjct: 901  GLDGAHIENQRVDIIKCSDEKFRERFRV---DLMDPERTLSPNVLEQA-TEIAGDIEVQT 956

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +EW QL KDR F+R    K  +  + L +N++R++ +AK IF +R+   SDL
Sbjct: 957  YLDEEWEQLLKDRAFMR-AAAKEDDEMMQLPINVQRILESAKTIFRIREGAISDL 1010

[144][TOP]
>UniRef100_C1GHL1 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
            Pb18 RepID=C1GHL1_PARBD
          Length = 1746

 Score =  169 bits (427), Expect = 1e-40
 Identities = 91/175 (52%), Positives = 124/175 (70%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQR+LVKA+E+VMVKYDGTVRNS   V+QFLYGED
Sbjct: 835  EFFFHAMAGREGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDVVQFLYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDGA +E+Q++  ++ +++ F +R+ +   DL   E + SP + + A  +I    +V  
Sbjct: 895  GLDGAHIENQRVDIIKCSDEKFRERFRV---DLMDPERTLSPNVLEQA-TEIAGDIEVQT 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +EW QL KDR F+R    K  +  + L +N++R++ +AK IF +R+   SDL
Sbjct: 951  YLDEEWEQLLKDRAFMR-TAAKEDDEMMQLPINVQRILESAKTIFRIREGAISDL 1004

[145][TOP]
>UniRef100_C0SE75 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
            Pb03 RepID=C0SE75_PARBP
          Length = 2106

 Score =  169 bits (427), Expect = 1e-40
 Identities = 91/175 (52%), Positives = 124/175 (70%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQR+LVKA+E+VMVKYDGTVRNS   V+QFLYGED
Sbjct: 835  EFFFHAMAGREGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDVVQFLYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDGA +E+Q++  ++ +++ F +R+ +   DL   E + SP + + A  +I    +V  
Sbjct: 895  GLDGAHIENQRVDIIKCSDEKFRERFRV---DLMDPERTLSPNVLEQA-TEIAGDIEVQT 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +EW QL KDR F+R    K  +  + L +N++R++ +AK IF +R+   SDL
Sbjct: 951  YLDEEWEQLLKDRAFMR-TAAKEDDEMMQLPINVQRILESAKTIFRIREGAISDL 1004

[146][TOP]
>UniRef100_B7SNX1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nicotiana tabacum
            RepID=B7SNX1_TOBAC
          Length = 1010

 Score =  168 bits (426), Expect = 2e-40
 Identities = 90/175 (51%), Positives = 116/175 (66%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMED+MVKYDGTVRNS   VIQFLYGED
Sbjct: 749  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED 808

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   +E QKL +L++   +F   Y     D     + N  Y+   A+ D+ +  ++  
Sbjct: 809  GMDAVWIETQKLDSLKAKKSTFDDLYAYEIDD----PNWNPSYMLPEAIEDLKTIREIRS 864

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +   E  +L+ DR  L  E+  TG+   PL VNI+RL+ NA++ F +    RSD+
Sbjct: 865  VFDAEVQKLQADRKQLGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRRSDM 919

[147][TOP]
>UniRef100_B0XAQ9 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
            RepID=B0XAQ9_CULQU
          Length = 1874

 Score =  168 bits (426), Expect = 2e-40
 Identities = 87/175 (49%), Positives = 118/175 (67%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 825  EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGED 884

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L T++ +N  F KRY     +    E +     ++  + ++   GDV +
Sbjct: 885  GLCGETVEFQNLPTIKLSNKVFEKRYRFDPTN----ERNIRRVFNEEVIKELTESGDVIQ 940

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             +  E+ QL +DR+ LR ++F  G++K+ L  N++R+IWN ++IF + +   +DL
Sbjct: 941  EIEAEYEQLLRDREALR-QIFPNGDSKVVLPCNLQRMIWNVQKIFHINKRAPTDL 994

[148][TOP]
>UniRef100_Q9HGZ5 DNA-directed RNA polymerase n=2 Tax=Aspergillus RepID=Q9HGZ5_ASPOR
          Length = 1748

 Score =  168 bits (426), Expect = 2e-40
 Identities = 92/175 (52%), Positives = 121/175 (69%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQR+LVKA+E+VMVKYDGTVRNS   +IQF+YGED
Sbjct: 832  EFFFHAMAGREGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDIIQFIYGED 891

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDGA +E+Q++  ++ ++D F  R+ +   DL   E S  P + + A N+I    +V  
Sbjct: 892  GLDGAHIENQRVDIIKCSDDQFRDRFRI---DLMDPERSLGPEVLEQA-NEIAGDVEVQR 947

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +EW QL K R FLR  V K  E  + L +N++R++  A+  F +R+   SDL
Sbjct: 948  YLDEEWEQLLKARAFLR-TVAKEDEEMMQLPINVQRILEMARTTFRIREGTISDL 1001

[149][TOP]
>UniRef100_Q5KGG3 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
            RepID=Q5KGG3_CRYNE
          Length = 1786

 Score =  168 bits (426), Expect = 2e-40
 Identities = 93/175 (53%), Positives = 122/175 (69%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EF+FHAMGGREGLIDTAVKTAETGYIQRRLVKAMED+ V YDGTVRNS + V+QFLYGED
Sbjct: 829  EFWFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDLKVAYDGTVRNSVNEVVQFLYGED 888

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+DGA +E Q L  +R ++ +F +RY +      L  S  S  + QA ++   S   + +
Sbjct: 889  GMDGAAMEKQSLDIIRLSDQAFERRYKIDV----LGGSGFSKGILQAGID--QSSISLQK 942

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            LL +E+AQ+ +DR  LR E++  G    PL VNI+R+I N+++IF +     SDL
Sbjct: 943  LLDEEFAQISEDRRILRSEIYPDGTPGHPLPVNIQRVIQNSQQIFHIDPRVPSDL 997

[150][TOP]
>UniRef100_Q4P7Q0 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis
            RepID=Q4P7Q0_USTMA
          Length = 1774

 Score =  168 bits (426), Expect = 2e-40
 Identities = 94/175 (53%), Positives = 122/175 (69%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQRRLVKA+EDVMV YDGTVRNS ++VIQF YGED
Sbjct: 826  EFFFHAMAGREGLIDTAVKTAETGYIQRRLVKALEDVMVCYDGTVRNSTNNVIQFAYGED 885

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+DGA VE Q L TL+  +  F    H+   DLH  +        +  L D     ++ +
Sbjct: 886  GIDGAQVETQTLLTLKLNDADFR---HMFRVDLH--DGGFKKGTLRPGLGDWSQ--ELQD 938

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            LL +E+AQL+ DR+ LRHE+F++ + ++ L +N+ RL+ NA++IF V     +DL
Sbjct: 939  LLDEEFAQLEFDRNLLRHEIFQSDQVQVRLPMNVARLVLNAQQIFHVDPRKPTDL 993

[151][TOP]
>UniRef100_Q2PYS8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rozella allomycis
            RepID=Q2PYS8_9FUNG
          Length = 809

 Score =  168 bits (426), Expect = 2e-40
 Identities = 89/175 (50%), Positives = 120/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQR+LVKA+EDVM+KYDGTVRN+   +IQF YGED
Sbjct: 548  EFFFHAMGGREGLIDTAVKTAETGYIQRKLVKALEDVMIKYDGTVRNALGEIIQFKYGED 607

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   +E Q L ++R  N  F  +Y +    L+     +   L +  + +I +   +  
Sbjct: 608  GMDAVKIEKQSLDSMRLNNKKFEIKYKV--DFLNPMYGISENVLQKEIIEEILATPVMLI 665

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L KE+ QL +DR+ LR E+FK+G++  PL +NI+R+IWNA+ +F +     SDL
Sbjct: 666  ALDKEYRQLTEDRNVLR-EIFKSGDSSWPLPLNIKRMIWNAQSLFKIDFRKPSDL 719

[152][TOP]
>UniRef100_A5E6J4 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
            RepID=A5E6J4_LODEL
          Length = 1745

 Score =  168 bits (426), Expect = 2e-40
 Identities = 89/175 (50%), Positives = 122/175 (69%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQRRLVKA+ED+MV YDGT RNS   +IQF+YGED
Sbjct: 806  EFFFHAMAGREGLIDTAVKTAETGYIQRRLVKALEDIMVHYDGTTRNSLGDIIQFIYGED 865

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   VE Q + T+  +++SF +RY +   D+  + +S S  L ++   +I    ++ +
Sbjct: 866  GIDATQVEKQSVDTIPGSDESFERRYRI---DVLEKNASISTNLLESG-EEIQGDVELQK 921

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +L +E+ QL +DR +LR  VF  G+   PL VN+ R+I NA++IF   ++  SDL
Sbjct: 922  ILDEEYNQLLEDRKYLRDVVFPNGDFSWPLPVNLRRIIQNAQQIFHSGRDKPSDL 976

[153][TOP]
>UniRef100_UPI000179348F PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
            (RNA polymerase II subunit B1) (DNA-directed RNA
            polymerase III largest subunit) n=1 Tax=Acyrthosiphon
            pisum RepID=UPI000179348F
          Length = 1862

 Score =  168 bits (425), Expect = 2e-40
 Identities = 88/176 (50%), Positives = 115/176 (65%), Gaps = 1/176 (0%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 828  EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGED 887

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHL-TEPDLHLQESSNSPYLSQAALNDIHSGGDVT 359
            GL G  VE Q + T+  ++  F   +      + H+++       ++  L D+    D  
Sbjct: 888  GLCGEAVEFQSIATIEPSHKKFENEFKFDVSNERHMRK-----IFTEDVLKDMMGSNDTV 942

Query: 360  ELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
              L KEW QL  DRD LR E+F +GE+K+ L  N++R+IWN ++IF + +   +DL
Sbjct: 943  AELEKEWEQLTNDRDTLR-EIFPSGESKVVLPCNLKRMIWNVQKIFHINKRGPTDL 997

[154][TOP]
>UniRef100_A9QMP7 RNA polymerase 2 (Fragment) n=1 Tax=Rhabditoides inermis
           RepID=A9QMP7_9BILA
          Length = 440

 Score =  168 bits (425), Expect = 2e-40
 Identities = 89/175 (50%), Positives = 115/175 (65%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + +IQ  YGED
Sbjct: 14  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQLIQLRYGED 73

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + +++  N  F + +                   +  + D+ S  D  +
Sbjct: 74  GLDGMWVENQSMPSMKPNNALFKRDF-------------------KEVIRDLQSNPDALK 114

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +  EWAQL++DR  LR ++F  G+AK+ L  N++RLIWNA++IF V     +DL
Sbjct: 115 EVECEWAQLEEDRRLLR-KIFPKGDAKIVLPCNLQRLIWNAQKIFHVETRKPTDL 168

[155][TOP]
>UniRef100_A9QMG0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Oscheius tipulae
           RepID=A9QMG0_OSCTI
          Length = 629

 Score =  168 bits (425), Expect = 2e-40
 Identities = 90/175 (51%), Positives = 119/175 (68%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   ++Q  YGED
Sbjct: 44  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSIGQMVQLRYGED 103

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + T++ +N  F + + L   DL  ++     Y S+    ++ +  +  E
Sbjct: 104 GLDGMWVENQVMSTMKPSNALFERDFKL---DLSDEKMMRRCY-SEDLYRELQNEPEAIE 159

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +  EWAQL++DR  LR + F  G+ K+ L  N++RLIWNA++IF V   + + L
Sbjct: 160 EIENEWAQLEEDRRLLR-KTFPNGDNKVVLPCNLQRLIWNAQKIFHVETREVTSL 213

[156][TOP]
>UniRef100_B8M2Y2 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC 10500
            RepID=B8M2Y2_TALSN
          Length = 1755

 Score =  168 bits (425), Expect = 2e-40
 Identities = 92/176 (52%), Positives = 124/176 (70%), Gaps = 1/176 (0%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EF+FHAMGGREGLIDTAVKTAETGYIQR+LVKA+E++MVKYDGTVRNS   +IQFLYGED
Sbjct: 833  EFYFHAMGGREGLIDTAVKTAETGYIQRKLVKALEELMVKYDGTVRNSLGDIIQFLYGED 892

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSP-YLSQAALNDIHSGGDVT 359
            GLDGA +E+Q++  ++ +++ F  R+ +   DL   E +  P  L QAA  +I    +V 
Sbjct: 893  GLDGAHIENQRVDIIKCSDEQFRDRFRV---DLMDPERTLGPEVLEQAA--EIEGDVEVQ 947

Query: 360  ELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
              L +EW  L KDR+FLR  V K  E  + L +N++R++ +AK  F +++   SDL
Sbjct: 948  RYLDEEWEALLKDREFLR-SVAKGDEEMMQLPLNVQRILESAKTTFHIKEGTISDL 1002

[157][TOP]
>UniRef100_UPI0000F2BF13 PREDICTED: similar to RNA polymerase II isoform 2 n=1 Tax=Monodelphis
            domestica RepID=UPI0000F2BF13
          Length = 1932

 Score =  167 bits (424), Expect = 3e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 835  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 895  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEELVKDVLSNAHIQN 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 951  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1004

[158][TOP]
>UniRef100_UPI0000F2BF12 PREDICTED: similar to RNA polymerase II isoform 1 n=1 Tax=Monodelphis
            domestica RepID=UPI0000F2BF12
          Length = 1970

 Score =  167 bits (424), Expect = 3e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 835  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 895  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEELVKDVLSNAHIQN 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 951  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1004

[159][TOP]
>UniRef100_Q9BMP2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Stylonychia mytilus
            RepID=Q9BMP2_STYMT
          Length = 1678

 Score =  167 bits (424), Expect = 3e-40
 Identities = 90/180 (50%), Positives = 118/180 (65%), Gaps = 5/180 (2%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KA+EDVMVKYDGTVR S+  +IQFLYGED
Sbjct: 714  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKALEDVMVKYDGTVRTSKEQIIQFLYGED 773

Query: 183  GLDGALVEDQKLGTLRSTN---DSFTKRYHLTEPDLHLQESSN--SPYLSQAALNDIHSG 347
            G+ G  +ED  +  L+  N    +  K  H  +P++   E     S ++ +     I   
Sbjct: 774  GMAGEHIEDLTINLLKMKNTDVQNKCKFLHKPKPNMSDNELEQHLSKFMDREYAERIIRD 833

Query: 348  GDVTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             ++   L  E+ Q+ +DRD LR  + K+ E  + LAVN+ R+IWNAK  F +R N +S+L
Sbjct: 834  PEICLQLENEYKQIIQDRDDLRFTILKSQEDAVHLAVNVPRIIWNAKEQFSIRPNQKSNL 893

[160][TOP]
>UniRef100_O00820 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acanthamoeba
            castellanii RepID=O00820_ACACA
          Length = 1569

 Score =  167 bits (424), Expect = 3e-40
 Identities = 92/175 (52%), Positives = 113/175 (64%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKA+EDVMVKYD TVRNS   VIQFLYGED
Sbjct: 741  EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDVMVKYDYTVRNSLGDVIQFLYGED 800

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+DG  VE Q L  L+ +N+    +Y          E    P ++ A  N      +   
Sbjct: 801  GMDGQTVETQPLDALKMSNEGVVLKYQHDYDSPSWGEGWIDPVIADAIAN----SPEKKR 856

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +L KE+ Q+  DR  LR ++F  G+ + PL VN+ R+I NA++IF +     SDL
Sbjct: 857  ILDKEFEQILADRRLLREKIFLAGDDRWPLPVNLTRMILNAQKIFHLGPKKVSDL 911

[161][TOP]
>UniRef100_B3RM26 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
            RepID=B3RM26_TRIAD
          Length = 1784

 Score =  167 bits (424), Expect = 3e-40
 Identities = 90/175 (51%), Positives = 118/175 (67%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRN+   +IQ  YGED
Sbjct: 823  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEGVMVHYDGTVRNANMQLIQLCYGED 882

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDG+ +E Q + +L+ ++  F +R+     D+   E     YL    +  I +  +V E
Sbjct: 883  GLDGSAIEFQDMPSLKLSHTGFQRRFRF---DIQ-NEKRLKQYLHGNIVRSIITDAEVKE 938

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L  E+ QL KDR+ +R  + + G++++ L VN+ RLIWNA++IF V     SDL
Sbjct: 939  KLQSEFEQLSKDRNAVR-SILQNGDSRVALPVNLNRLIWNAQKIFHVDPRKSSDL 992

[162][TOP]
>UniRef100_B3MQ29 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
            RepID=B3MQ29_DROAN
          Length = 1889

 Score =  167 bits (424), Expect = 3e-40
 Identities = 90/179 (50%), Positives = 118/179 (65%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 827  EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGED 886

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDI----HSGG 350
            GL G LVE Q + T++ +N SF KR+          + SN  Y+ +   +D+        
Sbjct: 887  GLCGELVEFQNMPTVKLSNKSFEKRFKF--------DWSNERYMRKVFTDDVIKEMTDSS 938

Query: 351  DVTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            D  + L  EW +L  DRD LR ++F  G++K+ L  N++R+IWN ++IF + +   +DL
Sbjct: 939  DAIQELEAEWDRLVTDRDSLR-QIFPNGDSKVVLPCNLQRMIWNVQKIFHINKRLPTDL 996

[163][TOP]
>UniRef100_A9QMG8 RNA polymerase 2 (Fragment) n=1 Tax=rhabditoid sp. PDL15
           RepID=A9QMG8_9BILA
          Length = 587

 Score =  167 bits (424), Expect = 3e-40
 Identities = 88/175 (50%), Positives = 118/175 (67%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + +IQ  YGED
Sbjct: 28  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSXAQMIQLRYGED 87

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + +++ ++  F + + L   D    E S     +   + D+ S  +  +
Sbjct: 88  GLDGMWVENQTMPSMKPSHALFEREFKLDLAD----ERSLRRMFTDEVVRDLQSTPESLK 143

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
               EW QL++DR  LR ++F  G++K+ L  N++RLIWNA++IF V     ++L
Sbjct: 144 EXESEWXQLEEDRXLLR-KIFPKGDSKVVLPCNLQRLIWNAQKIFHVETRKXTEL 197

[164][TOP]
>UniRef100_A9QMF6 RNA polymerase 2 (Fragment) n=1 Tax=Pristionchus pacificus
           RepID=A9QMF6_PRIPA
          Length = 583

 Score =  167 bits (424), Expect = 3e-40
 Identities = 89/175 (50%), Positives = 114/175 (65%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 7   EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVCYDGTVRNSLQQMIQLRYGED 66

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + +++ +N  F   + L   D    E       S   + ++    +  +
Sbjct: 67  GLDGMWVENQGMPSMKPSNSLFEANFRLDLAD----ERGLKKMYSDDLVRELMGSSEALK 122

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
               EW QL++DR+ LR  +F  G+AK+ L  N++RLIWNA++IF V     +DL
Sbjct: 123 EAEAEWQQLQEDRELLR-MIFPKGDAKIVLPCNLQRLIWNAQKIFHVEMRKPTDL 176

[165][TOP]
>UniRef100_Q2PYQ8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Paraglomus occultum
            RepID=Q2PYQ8_9GLOM
          Length = 847

 Score =  167 bits (424), Expect = 3e-40
 Identities = 93/177 (52%), Positives = 116/177 (65%), Gaps = 2/177 (1%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKA+EDVMVKYDGTVRNS   VI+F YGED
Sbjct: 583  EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDVMVKYDGTVRNSLGDVIRFCYGED 642

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGD--V 356
            G DG  VE Q L +LR ++  F K+Y++   DL      N   +     + I   G    
Sbjct: 643  GTDGCYVESQTLDSLRLSDADFEKKYYI---DLRKDPDLNPSLVDPRVWDRISDDGSDKY 699

Query: 357  TELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             + L +E+++L +DR  LR  +F  G+ K PL VNI+RLI N+++ F       SD+
Sbjct: 700  QQHLDQEYSKLLEDRKILREFIFPNGDNKWPLPVNIKRLIKNSQQTFKSHLRGGSDI 756

[166][TOP]
>UniRef100_C5E245 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340
            RepID=C5E245_LACTC
          Length = 1740

 Score =  167 bits (424), Expect = 3e-40
 Identities = 92/175 (52%), Positives = 123/175 (70%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKA+ED+MV YDGT RNS  +VIQF+YGED
Sbjct: 812  EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDIMVHYDGTTRNSLGNVIQFIYGED 871

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D A +E Q + T+ S++ +F +R+ +   DL     +  P L ++  ++I     +  
Sbjct: 872  GMDAAHIEKQTIDTIASSDAAFERRFRI---DLLNPRHALDPSLLESG-SEIIGDLKLQA 927

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            LL +E+ QL +DR+FLR ++F  GE   PL VNI R+I NA++ F + Q   +DL
Sbjct: 928  LLDEEFKQLVEDREFLR-KIFVDGEQNWPLPVNIRRIIQNAQQTFRIDQTKPTDL 981

[167][TOP]
>UniRef100_A1YIB8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Gigaspora gigantea
            RepID=A1YIB8_9GLOM
          Length = 1039

 Score =  167 bits (424), Expect = 3e-40
 Identities = 90/175 (51%), Positives = 114/175 (65%), Gaps = 7/175 (4%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKA+EDVMVKYDGTVRNS   ++QF YGED
Sbjct: 763  EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDVMVKYDGTVRNSLGDIVQFCYGED 822

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGD--- 353
            G+D   VE Q   TL   N  F  +Y +   +L   E +      Q    D+        
Sbjct: 823  GMDACFVEPQTFDTLPMNNAEFDNKYLI---ELKDDEKNKEKEAGQQDDTDLVQPKKPKT 879

Query: 354  ----VTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVR 506
                + E + +E+ QLK+DR+ L+ ++F  G+ K PL VNI+RLI NA++ F++R
Sbjct: 880  QQEIIREKIVEEYVQLKRDREMLQRDIFTNGDNKWPLPVNIKRLIKNAQQKFNIR 934

[168][TOP]
>UniRef100_UPI0001796DD3 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
            (RNA polymerase II subunit B1) (DNA-directed RNA
            polymerase II subunit A) (DNA-directed RNA polymerase III
            largest subunit) n=1 Tax=Equus caballus
            RepID=UPI0001796DD3
          Length = 1834

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 835  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 895  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 951  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1004

[169][TOP]
>UniRef100_UPI0000F24379 DNA-directed RNA polymerase II largest subunit (RNA polymerase II
            subunit 1) (B220) n=1 Tax=Pichia stipitis CBS 6054
            RepID=UPI0000F24379
          Length = 1739

 Score =  167 bits (423), Expect = 4e-40
 Identities = 89/175 (50%), Positives = 115/175 (65%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQRRLVKA+ED+MV YDGT RNS   +IQF+YGED
Sbjct: 812  EFFFHAMAGREGLIDTAVKTAETGYIQRRLVKALEDIMVHYDGTTRNSLGDIIQFVYGED 871

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+DG  VE Q + T+  +NDSF +R+ +      L  S + P     +  +I     + +
Sbjct: 872  GIDGTQVEKQSVDTIPGSNDSFERRFRIDV----LDSSKSIPESLLESGKEIKGDVKLQK 927

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +L +E+ QL  DR +LR   F  G+   PL VN+ R+I NA++IF   +   SDL
Sbjct: 928  VLDEEYKQLLDDRKYLREVCFPNGDFSWPLPVNLRRIIQNAQQIFHNGRYKASDL 982

[170][TOP]
>UniRef100_UPI0000EBDCD2 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
            isoform 4 n=1 Tax=Bos taurus RepID=UPI0000EBDCD2
          Length = 1970

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 835  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 895  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 951  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1004

[171][TOP]
>UniRef100_UPI0000E24648 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) n=1 Tax=Pan troglodytes RepID=UPI0000E24648
          Length = 1913

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 835  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 895  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 951  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1004

[172][TOP]
>UniRef100_UPI0000E12351 Os05g0151000 n=1 Tax=Oryza sativa Japonica Group RepID=UPI0000E12351
          Length = 2085

 Score =  167 bits (423), Expect = 4e-40
 Identities = 91/177 (51%), Positives = 115/177 (64%), Gaps = 2/177 (1%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMED+MVKYDGTVRNS   VIQFLYGED
Sbjct: 831  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED 890

Query: 183  GLDGALVEDQKLGTLRSTNDSFTK--RYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDV 356
            G+D   +E QKL +L+     F    RY L +      E+    YLS     D+ +  ++
Sbjct: 891  GMDAIWIESQKLDSLKMKKAEFDNVFRYELDD------ENWKPNYLSTQHAEDLKTISEI 944

Query: 357  TELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
              +   E  +L+ DR  L  E+  TG+   P+ VN++RLIWNA++ F +     SD+
Sbjct: 945  RNVFEAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDM 1001

[173][TOP]
>UniRef100_UPI0000D9E16B PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) n=1 Tax=Macaca mulatta RepID=UPI0000D9E16B
          Length = 1193

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 835  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 895  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 951  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1004

[174][TOP]
>UniRef100_UPI00005A0B2C PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 23 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B2C
          Length = 1888

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 835  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 895  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 951  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1004

[175][TOP]
>UniRef100_UPI00005A0B2B PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 22 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B2B
          Length = 1892

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 837  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 896

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 897  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 952

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 953  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1006

[176][TOP]
>UniRef100_UPI00005A0B2A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 21 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B2A
          Length = 1896

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 837  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 896

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 897  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 952

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 953  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1006

[177][TOP]
>UniRef100_UPI00005A0B29 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 20 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B29
          Length = 1891

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 804  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 863

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 864  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 919

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 920  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 973

[178][TOP]
>UniRef100_UPI00005A0B28 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 19 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B28
          Length = 1908

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 821  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 880

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 881  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 936

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 937  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 990

[179][TOP]
>UniRef100_UPI00005A0B27 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
            A isoform 18 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B27
          Length = 1831

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 835  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 895  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 951  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1004

[180][TOP]
>UniRef100_UPI00005A0B26 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
            A isoform 17 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B26
          Length = 1684

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 825  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 884

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 885  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 940

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 941  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 994

[181][TOP]
>UniRef100_UPI00005A0B25 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
            A isoform 16 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B25
          Length = 1752

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 825  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 884

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 885  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 940

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 941  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 994

[182][TOP]
>UniRef100_UPI00005A0B24 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 15 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B24
          Length = 1924

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 837  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 896

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 897  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 952

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 953  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1006

[183][TOP]
>UniRef100_UPI00005A0B23 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
            A isoform 14 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B23
          Length = 1653

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 808  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 867

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 868  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 923

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 924  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 977

[184][TOP]
>UniRef100_UPI00005A0B22 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
            A isoform 13 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B22
          Length = 1722

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 808  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 867

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 868  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 923

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 924  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 977

[185][TOP]
>UniRef100_UPI00005A0B21 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 12 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B21
          Length = 1922

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 835  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 895  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 951  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1004

[186][TOP]
>UniRef100_UPI00005A0B20 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 11 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B20
          Length = 1923

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 836  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 895

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 896  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 951

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 952  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1005

[187][TOP]
>UniRef100_UPI00005A0B1F PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
            A isoform 10 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B1F
          Length = 1840

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 831  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 890

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 891  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 946

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 947  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1000

[188][TOP]
>UniRef100_UPI00005A0B1E PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
            A isoform 9 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B1E
          Length = 1851

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 831  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 890

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 891  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 946

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 947  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1000

[189][TOP]
>UniRef100_UPI00005A0B19 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
            A isoform 5 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B19
          Length = 1693

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 821  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 880

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 881  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 936

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 937  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 990

[190][TOP]
>UniRef100_UPI00005A0B17 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 3 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B17
          Length = 1788

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 835  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 895  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 951  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1004

[191][TOP]
>UniRef100_UPI00005A0B16 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 2 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B16
          Length = 1922

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 835  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 895  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 951  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1004

[192][TOP]
>UniRef100_UPI00017B0A92 UPI00017B0A92 related cluster n=1 Tax=Tetraodon nigroviridis
            RepID=UPI00017B0A92
          Length = 1714

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYDGTVRNS + V+Q  YGED
Sbjct: 813  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDGTVRNSINQVVQLRYGED 872

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ ++ +F K++          E +    L +  + D+ +   V  
Sbjct: 873  GLAGENVEFQNLATLKPSHRAFEKKFKFD----CTNERALRRTLQEDVVKDVMTNAHVQS 928

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++K+DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     +DL
Sbjct: 929  SLEREFEKMKEDREILR-AIFPTGDSKVVLPCNLARMIWNAQKIFRINTRTPTDL 982

[193][TOP]
>UniRef100_UPI0001B7A25C UPI0001B7A25C related cluster n=1 Tax=Rattus norvegicus
            RepID=UPI0001B7A25C
          Length = 1968

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 837  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 896

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 897  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 952

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 953  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1006

[194][TOP]
>UniRef100_UPI0001B7A25B UPI0001B7A25B related cluster n=1 Tax=Rattus norvegicus
            RepID=UPI0001B7A25B
          Length = 1932

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 835  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 895  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 951  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1004

[195][TOP]
>UniRef100_UPI0000DA33D8 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) n=1 Tax=Rattus norvegicus RepID=UPI0000DA33D8
          Length = 1970

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 835  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 895  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 951  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1004

[196][TOP]
>UniRef100_UPI0001951285 220 kDa DNA-directed RNA polymerase polypeptide A n=1 Tax=Canis lupus
            familiaris RepID=UPI0001951285
          Length = 1969

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 835  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 895  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 951  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1004

[197][TOP]
>UniRef100_O35559 DNA-directed RNA polymerase n=1 Tax=Cricetulus griseus
            RepID=O35559_CRIGR
          Length = 1970

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 835  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 895  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 951  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1004

[198][TOP]
>UniRef100_O08847 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=O08847_MOUSE
          Length = 1966

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 835  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 895  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 951  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1004

[199][TOP]
>UniRef100_Q71ET3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Psilotum nudum
            RepID=Q71ET3_PSINU
          Length = 1013

 Score =  167 bits (423), Expect = 4e-40
 Identities = 91/175 (52%), Positives = 117/175 (66%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMEDVMVKYDGTVRNS   VI+FLYGED
Sbjct: 752  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIEFLYGED 811

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   +E QKL +++     F + Y + E D    E+ N  Y+    + D+ +  +   
Sbjct: 812  GMDAVWIESQKLDSMKMKTKEFDRMY-MFEID---SENWNPDYMLAEHVEDLKTIQEFRN 867

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +   E  +L+ DR  L  E+  +G+   PL VN++RLIWNA++IF V     SD+
Sbjct: 868  VFDAEVQKLEADRRQLCTEIAPSGDNSWPLPVNLKRLIWNAQKIFKVDFRKPSDM 922

[200][TOP]
>UniRef100_Q5WMZ9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
            RepID=Q5WMZ9_ORYSJ
          Length = 1741

 Score =  167 bits (423), Expect = 4e-40
 Identities = 91/177 (51%), Positives = 115/177 (64%), Gaps = 2/177 (1%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMED+MVKYDGTVRNS   VIQFLYGED
Sbjct: 778  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED 837

Query: 183  GLDGALVEDQKLGTLRSTNDSFTK--RYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDV 356
            G+D   +E QKL +L+     F    RY L +      E+    YLS     D+ +  ++
Sbjct: 838  GMDAIWIESQKLDSLKMKKAEFDNVFRYELDD------ENWKPNYLSTQHAEDLKTISEI 891

Query: 357  TELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
              +   E  +L+ DR  L  E+  TG+   P+ VN++RLIWNA++ F +     SD+
Sbjct: 892  RNVFEAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDM 948

[201][TOP]
>UniRef100_Q0DKN9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
            RepID=Q0DKN9_ORYSJ
          Length = 1834

 Score =  167 bits (423), Expect = 4e-40
 Identities = 91/177 (51%), Positives = 115/177 (64%), Gaps = 2/177 (1%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMED+MVKYDGTVRNS   VIQFLYGED
Sbjct: 831  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED 890

Query: 183  GLDGALVEDQKLGTLRSTNDSFTK--RYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDV 356
            G+D   +E QKL +L+     F    RY L +      E+    YLS     D+ +  ++
Sbjct: 891  GMDAIWIESQKLDSLKMKKAEFDNVFRYELDD------ENWKPNYLSTQHAEDLKTISEI 944

Query: 357  TELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
              +   E  +L+ DR  L  E+  TG+   P+ VN++RLIWNA++ F +     SD+
Sbjct: 945  RNVFEAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDM 1001

[202][TOP]
>UniRef100_Q25203 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ilyanassa obsoleta
            RepID=Q25203_9CAEN
          Length = 1343

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 115/175 (65%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMVKYDGTVRN    ++Q  YGED
Sbjct: 749  EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVKYDGTVRNQVEQLVQLGYGED 808

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLD   VE Q L TL+ +  +F +++     D  + +      L +  +  +     + E
Sbjct: 809  GLDACHVEFQSLPTLKPSTRAFERQFRFDPTDERMMKRC----LKEDVIKGLRGEHRLIE 864

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L  EW QL  DRD  R +VF TG+A++ L  N++R+IWNA++IF + +   SDL
Sbjct: 865  ELESEWLQLISDRDSAR-QVFSTGDARIVLPCNLQRMIWNAQKIFRIDKRKPSDL 918

[203][TOP]
>UniRef100_B4E3V7 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4E3V7_HUMAN
          Length = 1935

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 800  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 859

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 860  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 915

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 916  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 969

[204][TOP]
>UniRef100_A6NN93 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=A6NN93_HUMAN
          Length = 1970

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 835  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 895  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 951  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1004

[205][TOP]
>UniRef100_A7TTU2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Vanderwaltozyma
            polyspora DSM 70294 RepID=A7TTU2_VANPO
          Length = 1311

 Score =  167 bits (423), Expect = 4e-40
 Identities = 92/175 (52%), Positives = 118/175 (67%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKA+ED+MV YD T RNS  +VIQF+YGED
Sbjct: 494  EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDIMVHYDSTTRNSLGNVIQFVYGED 553

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D + +E Q + T+  +N +F KRY +   DL   E S    L ++  ++I     +  
Sbjct: 554  GIDASYIEKQSIDTIGGSNQAFEKRYRI---DLMSPEHSLDTTLLESG-SEIIGDVKIQS 609

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +L +E+ QL  DR FLR+ VF  GE   PL VNI R++ NA++ F +     SDL
Sbjct: 610  MLDEEYKQLVNDRRFLRN-VFIDGEQNWPLPVNIRRIVQNAQQTFRIDHTKPSDL 663

[206][TOP]
>UniRef100_A3GID7 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
            RepID=A3GID7_PICST
          Length = 1739

 Score =  167 bits (423), Expect = 4e-40
 Identities = 89/175 (50%), Positives = 115/175 (65%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQRRLVKA+ED+MV YDGT RNS   +IQF+YGED
Sbjct: 812  EFFFHAMAGREGLIDTAVKTAETGYIQRRLVKALEDIMVHYDGTTRNSLGDIIQFVYGED 871

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+DG  VE Q + T+  +NDSF +R+ +      L  S + P     +  +I     + +
Sbjct: 872  GIDGTQVEKQSVDTIPGSNDSFERRFRIDV----LDSSKSIPESLLESGKEIKGDVKLQK 927

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +L +E+ QL  DR +LR   F  G+   PL VN+ R+I NA++IF   +   SDL
Sbjct: 928  VLDEEYKQLLDDRKYLREVCFPNGDFSWPLPVNLRRIIQNAQQIFHNGRYKASDL 982

[207][TOP]
>UniRef100_A1YIA9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neolecta vitellina
            RepID=A1YIA9_9ASCO
          Length = 997

 Score =  167 bits (423), Expect = 4e-40
 Identities = 95/175 (54%), Positives = 118/175 (67%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQRRLVKA+EDVMVKYDGTVRNS   ++Q  YGED
Sbjct: 732  EFFFHAMAGREGLIDTAVKTAETGYIQRRLVKALEDVMVKYDGTVRNSLGDIVQLAYGED 791

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDGA VE Q L TL  ++ +F  RY +   DL +  +   P       NDI    ++  
Sbjct: 792  GLDGAKVEHQFLETLTLSDRNFEDRYRV---DL-MDPTRTIPANLLEVGNDIDGDEEMQN 847

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +EW QL +DR  LRH +F  G+ +  L VNI+R+I NA++IF + +   S+L
Sbjct: 848  YLDEEWMQLVEDRKKLRH-IFPDGDNRRALPVNIQRVIQNAQQIFHIDRRKPSNL 901

[208][TOP]
>UniRef100_P08775 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Mus musculus
            RepID=RPB1_MOUSE
          Length = 1970

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 835  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 895  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 951  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1004

[209][TOP]
>UniRef100_P24928 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Euarchontoglires
            RepID=RPB1_HUMAN
          Length = 1970

 Score =  167 bits (423), Expect = 4e-40
 Identities = 88/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 835  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 895  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     SDL
Sbjct: 951  ELEREFERMREDREVLR-VIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDL 1004

[210][TOP]
>UniRef100_Q2TUN7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Podocarpus
            macrophyllus RepID=Q2TUN7_9CONI
          Length = 1013

 Score =  167 bits (422), Expect = 5e-40
 Identities = 90/175 (51%), Positives = 115/175 (65%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMED+MVKYDGTVRNS   VIQFLYGED
Sbjct: 752  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED 811

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   +E QKL +L+     F   Y   E D   QE+ N  Y+    + D+ +  +   
Sbjct: 812  GMDAVWIESQKLDSLKMKRKEFENVYKY-EVD---QENWNPIYMLPEHVEDLKTIREFQN 867

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +   E  +L+ DR  L  E+  +G+   P+ VN++RLIWNA++ F +     SD+
Sbjct: 868  VFDAEVQKLESDRRQLGTEIAPSGDNSCPMPVNLKRLIWNAQKTFKIDPRKPSDM 922

[211][TOP]
>UniRef100_P91819 DNA-directed RNA polymerase (Fragment) n=1 Tax=Zeldia punctata
           RepID=P91819_ZELPU
          Length = 629

 Score =  167 bits (422), Expect = 5e-40
 Identities = 90/175 (51%), Positives = 112/175 (64%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   ++Q  YGED
Sbjct: 37  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQMVQLRYGED 96

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE Q + T++  N  F K++ L   D    E         + + ++    D   
Sbjct: 97  GLDGMWVEAQTMPTMKPNNSLFEKQFKLDLTD----ERDLRRIYXDSVVRELLGSADALR 152

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +  EW QL++DR  LR ++F  G+AK+ L  N++RLIWNA +IF V      DL
Sbjct: 153 EVESEWQQLEEDRRLLR-KIFPKGDAKVHLPCNLKRLIWNAHKIFHVDLKKPVDL 206

[212][TOP]
>UniRef100_C5FCL2 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
            RepID=C5FCL2_NANOT
          Length = 1748

 Score =  167 bits (422), Expect = 5e-40
 Identities = 91/175 (52%), Positives = 121/175 (69%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQR+LVKA+E+VMVKYDGTVRNS   ++QFLYGED
Sbjct: 834  EFFFHAMAGREGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDIVQFLYGED 893

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDG  +E+Q++  ++ +++ F  R+ +   DL   E   SP + + A  +I    +V +
Sbjct: 894  GLDGQCIENQRVDVIKCSDEQFRNRFRV---DLMDPERLLSPDILEQA-TEIAGDIEVQK 949

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +EW QL KDR FLR  V K  +  + L +NI+R++ +AK  F +R    SDL
Sbjct: 950  HLDEEWEQLLKDRAFLR-TVVKEDDEMMQLPINIQRILESAKTTFRIRDGTISDL 1003

[213][TOP]
>UniRef100_A9Q9S2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hydropunctaria maura
            RepID=A9Q9S2_9EURO
          Length = 999

 Score =  167 bits (422), Expect = 5e-40
 Identities = 90/179 (50%), Positives = 124/179 (69%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQRRLVKA+E+V VKYDGTVR+SR +++QF+YGED
Sbjct: 737  EFFFHAMAGREGLIDTAVKTAETGYIQRRLVKALEEVTVKYDGTVRDSRGNIVQFIYGED 796

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYH--LTEPDLHLQESSNSPYLSQAALNDIHSGGDV 356
            GLDGA +E Q++  +  ++D+F K+Y   L EP   + +      L QA  ++IH   DV
Sbjct: 797  GLDGAHIESQRVDVIAMSHDAFEKQYRVDLMEPKKLVWQDR----LEQA--SEIHGDVDV 850

Query: 357  TELLAKEWAQLKKDRDFLRH--EVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             +L  +E+ QL +DR FLRH  +   + +  +PL +N+ R++  A+  F ++    SDL
Sbjct: 851  QKLFDEEYEQLMEDRKFLRHIKQAATSSDEMMPLPMNVVRILNQARTTFKIQAGAPSDL 909

[214][TOP]
>UniRef100_A9Q9Q5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hydropunctaria
            adriatica RepID=A9Q9Q5_9EURO
          Length = 988

 Score =  167 bits (422), Expect = 5e-40
 Identities = 90/179 (50%), Positives = 124/179 (69%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQRRLVKA+E+V VKYDGTVR+SR +++QF+YGED
Sbjct: 726  EFFFHAMAGREGLIDTAVKTAETGYIQRRLVKALEEVTVKYDGTVRDSRGNIVQFIYGED 785

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYH--LTEPDLHLQESSNSPYLSQAALNDIHSGGDV 356
            GLDGA +E Q++  +  ++D+F K+Y   L EP   + +      L QA  ++IH   DV
Sbjct: 786  GLDGAHIESQRVDVIAMSHDAFEKQYRVDLMEPKKLVWQDR----LEQA--SEIHGDVDV 839

Query: 357  TELLAKEWAQLKKDRDFLRH--EVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             +L  +E+ QL +DR FLRH  +   + +  +PL +N+ R++  A+  F ++    SDL
Sbjct: 840  QKLFDEEYEQLMEDRKFLRHIKQAATSSDEMMPLPMNVVRILNQARTTFKIQAGAPSDL 898

[215][TOP]
>UniRef100_A1YIA6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Trichophyton rubrum
            RepID=A1YIA6_TRIRU
          Length = 1015

 Score =  167 bits (422), Expect = 5e-40
 Identities = 91/175 (52%), Positives = 121/175 (69%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQR+LVKA+E+VMVKYDGTVRNS   ++QFLYGED
Sbjct: 750  EFFFHAMAGREGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDIVQFLYGED 809

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDG  +E+Q++  ++ +++ F  R+ +   DL   E   SP + + A  +I    +V +
Sbjct: 810  GLDGQCIENQRVDVIKCSDEQFRNRFRV---DLMDPERLLSPDILEQA-TEIAGDIEVQK 865

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +EW QL KDR FLR  V K  +  + L +NI+R++ +AK  F +R    SDL
Sbjct: 866  HLDEEWEQLLKDRAFLR-TVVKEDDEMMQLPINIQRILESAKTTFRIRDGTISDL 919

[216][TOP]
>UniRef100_A1CNZ4 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
            RepID=A1CNZ4_ASPCL
          Length = 1765

 Score =  167 bits (422), Expect = 5e-40
 Identities = 90/175 (51%), Positives = 121/175 (69%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQR+LVKA+E+VMVKYDGTVRNS   VIQF+YGED
Sbjct: 834  EFFFHAMAGREGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDVIQFIYGED 893

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDG  +E+Q++  ++ +++   +R+ +   DL   E S  P + + A N+I    +V  
Sbjct: 894  GLDGGHIENQRVDIIKCSDEKLRERFRV---DLMDPERSLGPEVLEQA-NEIAGDVEVQR 949

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +EW QL KDR FLR  V K  +  + L +N++R++  A+  F +R+   SDL
Sbjct: 950  YLDEEWEQLLKDRAFLR-SVVKEDDEMMQLPINVQRILETARSTFRIREGAISDL 1003

[217][TOP]
>UniRef100_Q71ET4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Amborella trichopoda
            RepID=Q71ET4_AMBTC
          Length = 1013

 Score =  166 bits (421), Expect = 7e-40
 Identities = 91/175 (52%), Positives = 116/175 (66%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMED+MVKYDGTVRNS   VIQFLYGED
Sbjct: 752  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED 811

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   +E QKL +L+     F   Y   E D   QE+ +  Y+    + D+ +  +   
Sbjct: 812  GMDAVWIESQKLDSLKMKRAEFENVYKY-EID---QENWSPSYMLPEHVEDLKTIREFQN 867

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +   E  +L+ DR  L  E+  TG+   P+ VN++RLIWNA+++F V     SD+
Sbjct: 868  VFDAEVQKLEADRHQLGTEITTTGDNSWPMPVNLKRLIWNAQKMFKVDLRRPSDM 922

[218][TOP]
>UniRef100_B4IK28 DNA-directed RNA polymerase n=1 Tax=Drosophila sechellia
            RepID=B4IK28_DROSE
          Length = 1887

 Score =  166 bits (421), Expect = 7e-40
 Identities = 87/175 (49%), Positives = 116/175 (66%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 827  EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGED 886

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G LVE Q + T++ +N SF KR+     +  L +       +   + ++    +  +
Sbjct: 887  GLCGELVEFQNMPTVKLSNKSFEKRFKFDWSNERLMKK----VFTDDVIKEMTDSSEAIQ 942

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L  EW +L  DRD LR ++F  GE+K+ L  N++R+IWN ++IF + +   +DL
Sbjct: 943  ELEAEWDRLVSDRDSLR-QIFPNGESKVVLPCNLQRMIWNVQKIFHINKRLPTDL 996

[219][TOP]
>UniRef100_A9UNH9 DNA-directed RNA polymerase n=1 Tax=Drosophila melanogaster
            RepID=A9UNH9_DROME
          Length = 1887

 Score =  166 bits (421), Expect = 7e-40
 Identities = 87/175 (49%), Positives = 116/175 (66%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 827  EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGED 886

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G LVE Q + T++ +N SF KR+     +  L +       +   + ++    +  +
Sbjct: 887  GLCGELVEFQNMPTVKLSNKSFEKRFKFDWSNERLMKK----VFTDDVIKEMTDSSEAIQ 942

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L  EW +L  DRD LR ++F  GE+K+ L  N++R+IWN ++IF + +   +DL
Sbjct: 943  ELEAEWDRLVSDRDSLR-QIFPNGESKVVLPCNLQRMIWNVQKIFHINKRLPTDL 996

[220][TOP]
>UniRef100_Q6CL79 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
            RepID=Q6CL79_KLULA
          Length = 1720

 Score =  166 bits (421), Expect = 7e-40
 Identities = 92/175 (52%), Positives = 120/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKA+ED+MV YDGT RNS  +VIQF+YGED
Sbjct: 812  EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDIMVHYDGTTRNSLGNVIQFIYGED 871

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D A +E Q + T+  ++ +F +RY +   DL  +E +  P L ++  ++I     +  
Sbjct: 872  GMDAAHIEKQSIDTIPGSDSAFERRYRI---DLLNEEYALDPSLLESG-SEIIGDSKLQL 927

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            LL  E+ QL  DR  LR  VF  GE   PL VNI+R+I N+++ F + Q   +DL
Sbjct: 928  LLNDEYKQLVDDRQILR-RVFVDGEHNWPLPVNIKRIIQNSQQTFRIDQTKPTDL 981

[221][TOP]
>UniRef100_Q5ACI7 DNA-directed RNA polymerase n=1 Tax=Candida albicans
            RepID=Q5ACI7_CANAL
          Length = 1728

 Score =  166 bits (421), Expect = 7e-40
 Identities = 90/175 (51%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQRRLVKA+ED+MV YDGT RNS   +IQF+YGED
Sbjct: 812  EFFFHAMAGREGLIDTAVKTAETGYIQRRLVKALEDIMVHYDGTTRNSLGDIIQFIYGED 871

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+DG  VE Q + T+  +++SF +RY +   D+   E+  S  L ++   +I     + +
Sbjct: 872  GIDGTQVEKQSVDTIPGSDESFERRYKI---DVLDTENVISESLLESG-KEIRGDVQLQK 927

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +L +E+ QL KDR +LR   F  G+   PL VN+ R+I NA++IF   +   SDL
Sbjct: 928  ILDEEYNQLLKDRKYLREVCFPNGDFSWPLPVNLRRIIQNAQQIFHNGRYRASDL 982

[222][TOP]
>UniRef100_Q2PYS0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Entomophthora muscae
            RepID=Q2PYS0_9FUNG
          Length = 1007

 Score =  166 bits (421), Expect = 7e-40
 Identities = 91/165 (55%), Positives = 114/165 (69%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKA+EDVMV YDGTVRNS   ++QF YGED
Sbjct: 742  EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDVMVNYDGTVRNSLGQIVQFCYGED 801

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D A +E Q+   LR +N  F  +Y LT          ++ + + A L+   S     +
Sbjct: 802  GMDAAFIEKQRFDNLRLSNLEFENKYLLTVKPSGELNVDSALFDNDAFLDAGISYLAFNK 861

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIF 497
             LA E+AQL  DR+ LR+ VF +GE + P+ VNI+RLI NA+ +F
Sbjct: 862  ALADEFAQLVSDRNLLRNFVFTSGENEWPMPVNIKRLIRNAQVMF 906

[223][TOP]
>UniRef100_Q0MVT3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Staurothele
            frustulenta RepID=Q0MVT3_9EURO
          Length = 1010

 Score =  166 bits (421), Expect = 7e-40
 Identities = 90/179 (50%), Positives = 124/179 (69%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQRRLVKA+E+V VKYDGTVR+SR +++QF+YGED
Sbjct: 747  EFFFHAMAGREGLIDTAVKTAETGYIQRRLVKALEEVTVKYDGTVRDSRGNIVQFIYGED 806

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYH--LTEPDLHLQESSNSPYLSQAALNDIHSGGDV 356
            GLDGA +E Q++  +  ++D+F K++   L EP   + +      L QA  ++IH   DV
Sbjct: 807  GLDGAHIESQRVDVIAMSDDAFEKQFRVDLMEPKKLVWQDR----LDQA--SEIHGDVDV 860

Query: 357  TELLAKEWAQLKKDRDFLRH--EVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             ++  +E+ QL +DR FLRH  +   T +  +PL +NI R++  A+  F ++    SDL
Sbjct: 861  QKMFDEEYEQLAEDRRFLRHIKKAATTSDEMMPLPMNIVRILNQARTTFKIQSGATSDL 919

[224][TOP]
>UniRef100_A9Q9P4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Staurothele areolata
            RepID=A9Q9P4_9EURO
          Length = 999

 Score =  166 bits (421), Expect = 7e-40
 Identities = 90/179 (50%), Positives = 124/179 (69%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQRRLVKA+E+V VKYDGTVR+SR +++QF+YGED
Sbjct: 737  EFFFHAMAGREGLIDTAVKTAETGYIQRRLVKALEEVTVKYDGTVRDSRGNIVQFIYGED 796

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYH--LTEPDLHLQESSNSPYLSQAALNDIHSGGDV 356
            GLDGA +E Q++  +  ++D+F K++   L EP   + +      L QA  ++IH   DV
Sbjct: 797  GLDGAHIESQRVDVIAMSDDAFEKQFRVDLMEPKKLVWQDR----LDQA--SEIHGDVDV 850

Query: 357  TELLAKEWAQLKKDRDFLRH--EVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             ++  +E+ QL +DR FLRH  +   T +  +PL +NI R++  A+  F ++    SDL
Sbjct: 851  QKMFDEEYEQLAEDRRFLRHIKKAATTSDEMMPLPMNIVRILNQARTTFKIQSGATSDL 909

[225][TOP]
>UniRef100_P04052 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Drosophila
            melanogaster RepID=RPB1_DROME
          Length = 1887

 Score =  166 bits (421), Expect = 7e-40
 Identities = 87/175 (49%), Positives = 116/175 (66%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 827  EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGED 886

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G LVE Q + T++ +N SF KR+     +  L +       +   + ++    +  +
Sbjct: 887  GLCGELVEFQNMPTVKLSNKSFEKRFKFDWSNERLMKK----VFTDDVIKEMTDSSEAIQ 942

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L  EW +L  DRD LR ++F  GE+K+ L  N++R+IWN ++IF + +   +DL
Sbjct: 943  ELEAEWDRLVSDRDSLR-QIFPNGESKVVLPCNLQRMIWNVQKIFHINKRLPTDL 996

[226][TOP]
>UniRef100_UPI000186501C hypothetical protein BRAFLDRAFT_115025 n=1 Tax=Branchiostoma floridae
            RepID=UPI000186501C
          Length = 1956

 Score =  166 bits (420), Expect = 9e-40
 Identities = 90/175 (51%), Positives = 116/175 (66%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRL+KAME VM+ YDGTVRNS   ++Q  YGED
Sbjct: 831  EFFFHAMGGREGLIDTAVKTSETGYIQRRLIKAMESVMIAYDGTVRNSNRHLVQLRYGED 890

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLD   +E Q L TL+ +N SF K++ L     +  E      L +  + +I S   +  
Sbjct: 891  GLDAVSIEFQNLATLKPSNRSFEKKFKLD----YQNERYLRRILQEDIVREITSDARLQT 946

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             +  E+ QL+ DRD LR  V +TG+AK+ L  N+ R+IWNA++IF V     +DL
Sbjct: 947  EIEAEFEQLRVDRDVLR-SVNQTGDAKVALPCNLARIIWNAQKIFHVNTRAPTDL 1000

[227][TOP]
>UniRef100_UPI0000E48673 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 1 n=1 Tax=Strongylocentrotus purpuratus
            RepID=UPI0000E48673
          Length = 1880

 Score =  166 bits (420), Expect = 9e-40
 Identities = 87/175 (49%), Positives = 118/175 (67%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            E FFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV+YDGT RNS   ++Q  YGED
Sbjct: 829  EMFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVRYDGTCRNSNDQLVQLRYGED 888

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDG  +E Q L +L+ ++ +F KR+       +  E       ++  + D+ +   V  
Sbjct: 889  GLDGTSIEFQNLASLKPSHKAFEKRFKFD----YNNEKMLRRCFNEKIVKDVVANAHVHL 944

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L KE+ QLK+DR+ LR ++F  GE+K+ L  N++R+IWNA++IF +     S+L
Sbjct: 945  ELEKEYDQLKEDREVLR-KIFPKGESKVALPCNLDRMIWNAQQIFHINTRLPSEL 998

[228][TOP]
>UniRef100_UPI0000E48672 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 2 n=1 Tax=Strongylocentrotus purpuratus
            RepID=UPI0000E48672
          Length = 1913

 Score =  166 bits (420), Expect = 9e-40
 Identities = 87/175 (49%), Positives = 118/175 (67%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            E FFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV+YDGT RNS   ++Q  YGED
Sbjct: 835  EMFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVRYDGTCRNSNDQLVQLRYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDG  +E Q L +L+ ++ +F KR+       +  E       ++  + D+ +   V  
Sbjct: 895  GLDGTSIEFQNLASLKPSHKAFEKRFKFD----YNNEKMLRRCFNEKIVKDVVANAHVHL 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L KE+ QLK+DR+ LR ++F  GE+K+ L  N++R+IWNA++IF +     S+L
Sbjct: 951  ELEKEYDQLKEDREVLR-KIFPKGESKVALPCNLDRMIWNAQQIFHINTRLPSEL 1004

[229][TOP]
>UniRef100_UPI0000E48671 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 3 n=1 Tax=Strongylocentrotus purpuratus
            RepID=UPI0000E48671
          Length = 1921

 Score =  166 bits (420), Expect = 9e-40
 Identities = 87/175 (49%), Positives = 118/175 (67%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            E FFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV+YDGT RNS   ++Q  YGED
Sbjct: 835  EMFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVRYDGTCRNSNDQLVQLRYGED 894

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLDG  +E Q L +L+ ++ +F KR+       +  E       ++  + D+ +   V  
Sbjct: 895  GLDGTSIEFQNLASLKPSHKAFEKRFKFD----YNNEKMLRRCFNEKIVKDVVANAHVHL 950

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L KE+ QLK+DR+ LR ++F  GE+K+ L  N++R+IWNA++IF +     S+L
Sbjct: 951  ELEKEYDQLKEDREVLR-KIFPKGESKVALPCNLDRMIWNAQQIFHINTRLPSEL 1004

[230][TOP]
>UniRef100_UPI00016E658E UPI00016E658E related cluster n=1 Tax=Takifugu rubripes
            RepID=UPI00016E658E
          Length = 1628

 Score =  166 bits (420), Expect = 9e-40
 Identities = 87/175 (49%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYDGTVRNS + V+Q  YGED
Sbjct: 833  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDGTVRNSINQVVQLRYGED 892

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q + TL+ ++ +F K++          E +    L +  + D+ +   V  
Sbjct: 893  GLAGENVEFQNVATLKPSHRAFEKKFKFD----CTNERALRRTLQEDVVKDVMTNAHVQS 948

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++K+DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     +DL
Sbjct: 949  SLEREFEKMKEDREILR-AIFPTGDSKVVLPCNLARMIWNAQKIFRINTRTPTDL 1002

[231][TOP]
>UniRef100_Q71ET9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pinus nigra
            RepID=Q71ET9_9CONI
          Length = 1013

 Score =  166 bits (420), Expect = 9e-40
 Identities = 90/175 (51%), Positives = 115/175 (65%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMED+MVKYDGTVRNS   VIQFLYGED
Sbjct: 752  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED 811

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   +E QKL +L+     F   Y   E D   QE+ N  Y+    + D+ +  +   
Sbjct: 812  GMDAVWIESQKLDSLKMKKKEFENVYKY-ELD---QENWNPSYMLPEHVEDLKTIREFQN 867

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +   E  +L+ DR  L  E+  +G+   PL VN++RLIWN+++ F +     SD+
Sbjct: 868  VFDAEVQKLESDRRQLGMEIAPSGDNSWPLPVNLKRLIWNSQKTFKIDARRPSDM 922

[232][TOP]
>UniRef100_C3ZES3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
            RepID=C3ZES3_BRAFL
          Length = 1934

 Score =  166 bits (420), Expect = 9e-40
 Identities = 90/175 (51%), Positives = 116/175 (66%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRL+KAME VM+ YDGTVRNS   ++Q  YGED
Sbjct: 831  EFFFHAMGGREGLIDTAVKTSETGYIQRRLIKAMESVMIAYDGTVRNSNRHLVQLRYGED 890

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GLD   +E Q L TL+ +N SF K++ L     +  E      L +  + +I S   +  
Sbjct: 891  GLDAVSIEFQNLATLKPSNRSFEKKFKLD----YQNERYLRRILQEDIVREITSDARLQT 946

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             +  E+ QL+ DRD LR  V +TG+AK+ L  N+ R+IWNA++IF V     +DL
Sbjct: 947  EIEAEFEQLRVDRDVLR-SVNQTGDAKVALPCNLARIIWNAQKIFHVNTRAPTDL 1000

[233][TOP]
>UniRef100_A9QMH1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acrobeles maximus
           RepID=A9QMH1_9BILA
          Length = 616

 Score =  166 bits (420), Expect = 9e-40
 Identities = 88/175 (50%), Positives = 114/175 (65%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   ++Q  YGED
Sbjct: 44  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQMVQLRYGED 103

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q +  ++  N  F K++ L   D    E       + + + ++    +   
Sbjct: 104 GLDGMWVENQVMPIMKPNNSLFEKQFKLNLTD----ERELRRLYADSVVKELMGNAEAMR 159

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +  EW QL++DR  LR ++F  GE+K+ L  N++RLIWNA++IF V      DL
Sbjct: 160 EVEAEWQQLEEDRRLLR-KIFPKGESKVHLPCNLKRLIWNAQKIFHVDLRKTVDL 213

[234][TOP]
>UniRef100_A9QMG9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Poikilolaimus
           regenfussi RepID=A9QMG9_9BILA
          Length = 620

 Score =  166 bits (420), Expect = 9e-40
 Identities = 88/175 (50%), Positives = 122/175 (69%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS + ++Q  YGED
Sbjct: 37  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSMAQMVQLRYGED 96

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           GLDG  VE+Q + +++ +N  F + + L   DL  +      Y  +  + ++ +   + E
Sbjct: 97  GLDGMWVENQTMPSMKPSNALFEREFKL---DLGDERMLRKIYTDE-VVRELQTPEALKE 152

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +  EWAQL++DR  LR ++F  G+AK+ L  N++RLIWNA+++F V    +++L
Sbjct: 153 -VESEWAQLEEDRRLLR-KIFPKGDAKVVLPCNLQRLIWNAQKVFHVETRKQTEL 205

[235][TOP]
>UniRef100_Q2PYS7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Batrachochytrium
            dendrobatidis RepID=Q2PYS7_BATDE
          Length = 985

 Score =  166 bits (420), Expect = 9e-40
 Identities = 90/177 (50%), Positives = 117/177 (66%), Gaps = 2/177 (1%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKA+EDVM KYDGTVRN+   ++QF YGED
Sbjct: 730  EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDVMAKYDGTVRNALGDIVQFTYGED 789

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPD-LHLQESSNSPYLSQAALNDIHSGGDVT 359
            G++GA VE Q L ++  +N  F + Y +   D +H  + +   Y     ++D+    +  
Sbjct: 790  GMEGAKVEKQTLRSMSMSNADFVRSYRVDILDGVHKLKPNKLEY---RIIDDMSQNPEAQ 846

Query: 360  ELLAKEWAQLKKDRDFLRHEVF-KTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
                +E+ QL +DR  LR ++F  T   K  L VN+ERLIWNA+  F + +N  SDL
Sbjct: 847  VKFDEEFEQLAEDRLMLRQQIFPNTSTDKWALPVNLERLIWNARNTFHLDRNKPSDL 903

[236][TOP]
>UniRef100_Q2PYR1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Spiromyces aspiralis
            RepID=Q2PYR1_9FUNG
          Length = 1022

 Score =  166 bits (420), Expect = 9e-40
 Identities = 86/175 (49%), Positives = 118/175 (67%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+KA+ED+MV+YDG+VRNS   ++QF YGED
Sbjct: 759  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKALEDLMVQYDGSVRNSLGQIVQFTYGED 818

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   +E Q +  +R ++  F   Y +   D   ++S  S  L  + L ++    +V  
Sbjct: 819  GMDSTHLEGQSVNLVRYSDKKFESTYFVDVMD--SEKSFPSGTLEFSVLKNVEGNDEVQR 876

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +L  E+ QLK+DR  LR  + + GEA+ P+ VN+ RLI NA++IF +     S+L
Sbjct: 877  VLDDEYEQLKEDRHILRKFIARDGEARRPMPVNLPRLIKNAQQIFHIDHRKPSNL 931

[237][TOP]
>UniRef100_C5DXL0 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732
            RepID=C5DXL0_ZYGRC
          Length = 1744

 Score =  166 bits (420), Expect = 9e-40
 Identities = 91/175 (52%), Positives = 122/175 (69%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKA+ED+MV YDGT RNS  ++IQF+YGED
Sbjct: 812  EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDIMVHYDGTTRNSLGNIIQFIYGED 871

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D A +E Q + T+  ++ +F +RY +   DL   + S  P L ++  ++I     +  
Sbjct: 872  GMDAAHIEKQAVETIGGSDRNFERRYRI---DLLNPDYSLDPSLLESG-SEIIGDLKLQS 927

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            LL +E+ QL +DR FLR  +F  GE   PL VNI R+I NA++ F + ++  SD+
Sbjct: 928  LLDEEYKQLVEDRKFLR-RIFVDGEVNWPLPVNIRRIIQNAQQTFRIDRSKPSDV 981

[238][TOP]
>UniRef100_B9WN64 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
            RepID=B9WN64_CANDC
          Length = 1735

 Score =  166 bits (420), Expect = 9e-40
 Identities = 89/175 (50%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQRRLVKA+ED+MV YDGT RNS   +IQF+YGED
Sbjct: 812  EFFFHAMAGREGLIDTAVKTAETGYIQRRLVKALEDIMVHYDGTTRNSLGDIIQFIYGED 871

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+DG  VE Q + T+  +++SF +RY +   D+   ++  S  L ++   +I     + +
Sbjct: 872  GIDGTQVEKQSVDTIPGSDESFERRYRI---DILDTKNMISESLIESG-KEIRGDVQLQK 927

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +L +E+ QL KDR +LR   F  G+   PL VN+ R+I NA++IF   +   SDL
Sbjct: 928  ILDEEYNQLLKDRKYLREVCFPNGDFSWPLPVNLRRIIQNAQQIFHNGRYRASDL 982

[239][TOP]
>UniRef100_UPI0001985649 PREDICTED: similar to NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA
            binding / DNA-directed RNA polymerase n=1 Tax=Vitis
            vinifera RepID=UPI0001985649
          Length = 1848

 Score =  166 bits (419), Expect = 1e-39
 Identities = 89/175 (50%), Positives = 114/175 (65%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMED+MVKYDGTVRNS   VIQFLYGED
Sbjct: 830  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED 889

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   +E QKL +L+     F + +     D    E+ N  Y+    + D+ +  +   
Sbjct: 890  GMDAVWIETQKLDSLKMKKGEFDRVFKYEIDD----ENWNPSYMLPEHVEDLKTIREFRN 945

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +   E  +L+ DR  L  E+  TG+   P+ VN++RLIWNA++ F V     SD+
Sbjct: 946  VFDAEVQKLEADRFQLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDM 1000

[240][TOP]
>UniRef100_UPI00005A0B1A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 6 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B1A
          Length = 1767

 Score =  166 bits (419), Expect = 1e-39
 Identities = 89/177 (50%), Positives = 120/177 (67%), Gaps = 2/177 (1%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 821  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 880

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q L TL+ +N +F K++       +  E +    L +  + D+ S   +  
Sbjct: 881  GLAGESVEFQNLATLKPSNKAFEKKFRFD----YTNERALRRTLQEDLVKDVLSNAHIQN 936

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLP--LAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+P  L  N+ R+IWNA++IF +     SDL
Sbjct: 937  ELEREFERMREDREVLR-VIFPTGDSKVPVVLPCNLLRMIWNAQKIFHINPRLPSDL 992

[241][TOP]
>UniRef100_UPI0000546D90 PREDICTED: im:7136071 isoform 1 n=1 Tax=Danio rerio
            RepID=UPI0000546D90
          Length = 1972

 Score =  166 bits (419), Expect = 1e-39
 Identities = 85/175 (48%), Positives = 119/175 (68%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+ME VMVKYD TVRNS + V+Q  YGED
Sbjct: 832  EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGED 891

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G  VE Q + TL+ ++ +F K++       +  E +    L +  + D+ +   V  
Sbjct: 892  GLAGEAVEFQNMATLKPSHKAFEKKFKFD----YANERALRRTLQEDVVKDVMTNAHVQS 947

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             L +E+ ++++DR+ LR  +F TG++K+ L  N+ R+IWNA++IF +     +DL
Sbjct: 948  SLEREFEKMREDREILR-AIFPTGDSKVVLPCNLARMIWNAQKIFRINPRAPTDL 1001

[242][TOP]
>UniRef100_UPI000023F34A hypothetical protein FG00916.1 n=1 Tax=Gibberella zeae PH-1
            RepID=UPI000023F34A
          Length = 1758

 Score =  166 bits (419), Expect = 1e-39
 Identities = 93/182 (51%), Positives = 121/182 (66%), Gaps = 7/182 (3%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQRRLVKA+ED+  +YDGTVRNS   ++QFLYGED
Sbjct: 827  EFFFHAMAGREGLIDTAVKTAETGYIQRRLVKALEDLSARYDGTVRNSLGDIVQFLYGED 886

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVT- 359
            GLD  ++E+QKLG L  +N +F K+Y L        + +N P   +   +D   G ++T 
Sbjct: 887  GLDAMIIENQKLGILNMSNTAFEKKYRL--------DLANPP---EWFKHDYEFGNELTG 935

Query: 360  -----ELLAKEWAQLKKDRDFLRH-EVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRS 521
                  LL +EW +L  DR  +R     K  E  + L +NI R+I +AKR+F+V+ NDRS
Sbjct: 936  DRPSMALLDEEWERLVHDRTRIRAINRAKGNEEMMQLPLNITRIIESAKRVFNVKANDRS 995

Query: 522  DL 527
            +L
Sbjct: 996  NL 997

[243][TOP]
>UniRef100_Q71ET8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Welwitschia mirabilis
            RepID=Q71ET8_WELMI
          Length = 1013

 Score =  166 bits (419), Expect = 1e-39
 Identities = 90/175 (51%), Positives = 114/175 (65%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMED+MVKYDGTVRNS   V QFLYGED
Sbjct: 752  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVTQFLYGED 811

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   +E QKL +L+     F   Y   E D   QE+ N  Y+    + D+ +  +   
Sbjct: 812  GMDAVWIESQKLDSLKMKKREFDDVYKY-ELD---QENWNPGYMLPEHIEDLKTIREFQN 867

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +   E   L+ DR  L  E+  +G+   PL VN++RLIWNA+++F +     SD+
Sbjct: 868  VCDAEVQHLENDRRQLGTEIAPSGDNSWPLPVNLKRLIWNAQKLFKIDPRKASDM 922

[244][TOP]
>UniRef100_A7NVN7 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
           RepID=A7NVN7_VITVI
          Length = 1010

 Score =  166 bits (419), Expect = 1e-39
 Identities = 89/175 (50%), Positives = 114/175 (65%)
 Frame = +3

Query: 3   EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
           EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMED+MVKYDGTVRNS   VIQFLYGED
Sbjct: 67  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED 126

Query: 183 GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
           G+D   +E QKL +L+     F + +     D    E+ N  Y+    + D+ +  +   
Sbjct: 127 GMDAVWIETQKLDSLKMKKGEFDRVFKYEIDD----ENWNPSYMLPEHVEDLKTIREFRN 182

Query: 363 LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
           +   E  +L+ DR  L  E+  TG+   P+ VN++RLIWNA++ F V     SD+
Sbjct: 183 VFDAEVQKLEADRFQLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDM 237

[245][TOP]
>UniRef100_Q17085 DNA-directed RNA polymerase (Fragment) n=1 Tax=Artemia salina
            RepID=Q17085_ARTSA
          Length = 1341

 Score =  166 bits (419), Expect = 1e-39
 Identities = 90/175 (51%), Positives = 117/175 (66%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME  MV YDGTVRNS   VIQ  YGED
Sbjct: 747  EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEACMVAYDGTVRNSVGQVIQLRYGED 806

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            GL G LVE Q L T++ +N +F  +Y     +      + +  ++++ L D     +V  
Sbjct: 807  GLAGELVEFQSLPTIKLSNRAFESKYRFDPSNERQLRKTFTEDVTKSLLGD----SEVIT 862

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             + KEW  L KDR+ LR +VF +GE K+ L  N++R+IWNA++ F + +   SDL
Sbjct: 863  EIEKEWEALVKDREALR-KVFPSGENKVVLPCNLQRMIWNAQKTFHINKRMPSDL 916

[246][TOP]
>UniRef100_B4NDK9 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
            RepID=B4NDK9_DROWI
          Length = 1890

 Score =  166 bits (419), Expect = 1e-39
 Identities = 88/179 (49%), Positives = 118/179 (65%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EF+FHAMGGREGLIDTAVKTAETGYIQRRL+KAME VMV YDGTVRNS   +IQ  YGED
Sbjct: 827  EFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGED 886

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYL----SQAALNDIHSGG 350
            GL G LVE Q + T++ +N SF KR+          + +N  Y+    +   + ++    
Sbjct: 887  GLCGELVEFQNMPTVKLSNKSFEKRFKF--------DWTNERYMRKVFTDEVIKEMTDSS 938

Query: 351  DVTELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            D  + L  EW +L  DRD LR ++F  G++K+ L  N++R+IWN ++IF + +   +DL
Sbjct: 939  DAIQELESEWDRLVVDRDSLR-QIFPNGDSKVVLPCNLQRMIWNVQKIFHINKRLPTDL 996

[247][TOP]
>UniRef100_UPI00003BD271 hypothetical protein DEHA0A14036g n=1 Tax=Debaryomyces hansenii
            CBS767 RepID=UPI00003BD271
          Length = 1749

 Score =  165 bits (418), Expect = 2e-39
 Identities = 89/177 (50%), Positives = 121/177 (68%), Gaps = 2/177 (1%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAM GREGLIDTAVKTAETGYIQRRLVKA+ED+MV YDG+ RNS   +IQF+YGED
Sbjct: 817  EFFFHAMAGREGLIDTAVKTAETGYIQRRLVKALEDIMVHYDGSTRNSLGDIIQFVYGED 876

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHL--TEPDLHLQESSNSPYLSQAALNDIHSGGDV 356
            G+DG  VE Q + T+  +++SF KRY +   +P   ++ES     L ++   +I     +
Sbjct: 877  GIDGTQVEKQSVDTIPGSDESFEKRYRIDVLDPSKSIRES-----LLESG-KEIKGDVKL 930

Query: 357  TELLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
             ++L +E+ QL+ DR +LR   F  G+   PL VN+ R+I NA++IF   ++  SDL
Sbjct: 931  QKVLDEEYRQLEADRRYLRDVCFPNGDFNWPLPVNLRRIIQNAQQIFHNGRHKASDL 987

[248][TOP]
>UniRef100_Q30BD9 DNA-directed RNA polymerase n=1 Tax=Glaucocystis nostochinearum
            RepID=Q30BD9_9EUKA
          Length = 1852

 Score =  165 bits (418), Expect = 2e-39
 Identities = 92/175 (52%), Positives = 114/175 (65%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRL+KAMEDVMV+YD T+RNS   +IQF+YGED
Sbjct: 822  EFFFHAMGGREGLIDTAVKTSETGYIQRRLIKAMEDVMVQYDSTLRNSIGDIIQFVYGED 881

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   VE+QKL +++  +  F K Y   EPD     +    ++    +  I    D   
Sbjct: 882  GMDAVYVENQKLESMKMGDKEFGKVYKF-EPD---ARNFGDGFMDADIVQKIRDSADDRI 937

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            LL  E+ QL  DR  LR E   T E   PL VN++RLIWNA++IF +     SDL
Sbjct: 938  LLEAEFKQLMNDRTALR-ESIPTDENTWPLPVNLKRLIWNAQKIFHIDVRKPSDL 991

[249][TOP]
>UniRef100_B7SNX5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Saruma henryi
            RepID=B7SNX5_SARHE
          Length = 1009

 Score =  165 bits (418), Expect = 2e-39
 Identities = 89/175 (50%), Positives = 113/175 (64%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMED+MVKYDGTVRNS   VIQFLYGED
Sbjct: 748  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED 807

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   +E QKL +L+     F K +     D +     N  Y+    + D+ +  +   
Sbjct: 808  GMDAVWIESQKLDSLKMKKAEFDKVFRYEFDDANW----NPSYMLPEHVEDLKTIREFRS 863

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +   E  +L+ DR  L  E+  TG+   P+ VN++RLIWNA++ F V     SD+
Sbjct: 864  VFDAEVQKLEADRYQLGTEITTTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDM 918

[250][TOP]
>UniRef100_B7SNX2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Papaver orientale
            RepID=B7SNX2_PAPOR
          Length = 1010

 Score =  165 bits (418), Expect = 2e-39
 Identities = 89/175 (50%), Positives = 111/175 (63%)
 Frame = +3

Query: 3    EFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGED 182
            EFFFHAMGGREGLIDTAVKT+ETGYIQRRLVKAMED+MVKYDGTVRNS   VIQFLYGED
Sbjct: 749  EFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGED 808

Query: 183  GLDGALVEDQKLGTLRSTNDSFTKRYHLTEPDLHLQESSNSPYLSQAALNDIHSGGDVTE 362
            G+D   +E QKL +L+     F K Y     D    ++    Y+    + D+ +  +   
Sbjct: 809  GMDAVWIESQKLDSLKMKKPEFDKVYRFEFDD----DNWTPNYMQSDYVEDLKNIREFRH 864

Query: 363  LLAKEWAQLKKDRDFLRHEVFKTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDL 527
            +   E  +L  DR  L  E+  TG+   P+ VN+ RLIWNA++ F V     SD+
Sbjct: 865  VFDAEVKKLADDRLQLGTEITTTGDNSWPMPVNLRRLIWNAQKTFKVDPRRPSDM 919