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[1][TOP]
>UniRef100_A8I9Z6 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8I9Z6_CHLRE
Length = 1634
Score = 105 bits (261), Expect = 2e-21
Identities = 49/99 (49%), Positives = 74/99 (74%), Gaps = 4/99 (4%)
Frame = +2
Query: 176 GVDEEY----EDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESP 343
G DE++ ++ D +I ED+W VI A+FD+ GLVRQQL S+NEFV+VT+Q ++DE+P
Sbjct: 3 GADEDHMEVVQEEEDTEIVQEDSWNVITAFFDDKGLVRQQLDSFNEFVNVTIQEIIDETP 62
Query: 344 DIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+IV+ PE Q++PG +A +E + +IKFGQ+ +S+P TE
Sbjct: 63 EIVIKPESQHLPGVEAAEEK-EYIIKFGQVYLSRPQITE 100
[2][TOP]
>UniRef100_Q1L5X1 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=Q1L5X1_CHLRE
Length = 1607
Score = 103 bits (257), Expect = 6e-21
Identities = 47/92 (51%), Positives = 70/92 (76%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E ++ D +I ED+W VI A+FD+ GLVRQQL S+NEFV+VT+Q ++DE+P+IV+ PE
Sbjct: 2 EVVQEEEDTEIVQEDSWNVITAFFDDKGLVRQQLDSFNEFVNVTIQEIIDETPEIVIKPE 61
Query: 365 DQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
Q++PG +A +E + +IKFGQ+ +S+P TE
Sbjct: 62 SQHLPGVEAAEEK-EYIIKFGQVYLSRPQITE 92
[3][TOP]
>UniRef100_A9SJE5 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9SJE5_PHYPA
Length = 1185
Score = 102 bits (255), Expect = 1e-20
Identities = 52/95 (54%), Positives = 67/95 (70%)
Frame = +2
Query: 176 GVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVL 355
G DEEY+D + +I+ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ +VDES DI +
Sbjct: 3 GGDEEYDDEEE-EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESSDIEI 61
Query: 356 IPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
PE Q+ PGR A + I FGQ+ +SKP TE
Sbjct: 62 RPESQHNPGRQAEIGDVTYKINFGQIYLSKPMMTE 96
[4][TOP]
>UniRef100_B9RZ91 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9RZ91_RICCO
Length = 1194
Score = 102 bits (254), Expect = 1e-20
Identities = 49/94 (52%), Positives = 67/94 (71%)
Frame = +2
Query: 179 VDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLI 358
++E+YED ++ +I+ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ +VDES DI +
Sbjct: 11 LNEDYEDEDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIR 70
Query: 359 PEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
PE Q+ PG + T I FGQ+ +SKP TE
Sbjct: 71 PESQHNPGHQSDFAETIYKISFGQIYLSKPMMTE 104
[5][TOP]
>UniRef100_Q10G20 DNA-directed RNA polymerase n=2 Tax=Oryza sativa RepID=Q10G20_ORYSJ
Length = 1222
Score = 99.8 bits (247), Expect = 9e-20
Identities = 53/106 (50%), Positives = 69/106 (65%), Gaps = 5/106 (4%)
Frame = +2
Query: 158 EDGVYNGVDEEYED-----PNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQ 322
E G G + E E+ P++ +I+ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ
Sbjct: 30 EYGAVGGEEMEDEEADGDAPDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQ 89
Query: 323 RLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+VDES DI + PE Q+ PGR A T I FGQ+ +SKP TE
Sbjct: 90 EIVDESADIEIRPESQHNPGRQAEFAETLHKISFGQIYLSKPMMTE 135
[6][TOP]
>UniRef100_A7PJ31 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
RepID=A7PJ31_VITVI
Length = 1220
Score = 99.4 bits (246), Expect = 1e-19
Identities = 50/97 (51%), Positives = 66/97 (68%)
Frame = +2
Query: 170 YNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDI 349
Y+ E E+ +D +I+ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ +VDES DI
Sbjct: 7 YDPTVVEEEEDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 66
Query: 350 VLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+ PE Q+ PGR + T I FGQ+ +SKP TE
Sbjct: 67 EIRPESQHNPGRQSDFLETIYKISFGQIYLSKPMMTE 103
[7][TOP]
>UniRef100_A5C1N0 DNA-directed RNA polymerase n=2 Tax=Vitis RepID=A5C1N0_VITVI
Length = 1193
Score = 99.4 bits (246), Expect = 1e-19
Identities = 50/97 (51%), Positives = 66/97 (68%)
Frame = +2
Query: 170 YNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDI 349
Y+ E E+ +D +I+ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ +VDES DI
Sbjct: 7 YDPTVVEEEEDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 66
Query: 350 VLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+ PE Q+ PGR + T I FGQ+ +SKP TE
Sbjct: 67 EIRPESQHNPGRQSDFLETIYKISFGQIYLSKPMMTE 103
[8][TOP]
>UniRef100_C5WR62 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5WR62_SORBI
Length = 1218
Score = 98.6 bits (244), Expect = 2e-19
Identities = 54/107 (50%), Positives = 67/107 (62%), Gaps = 4/107 (3%)
Frame = +2
Query: 152 GNEDGVYNGVDEEYEDPNDAD----ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTM 319
G DG +G + E E D D I +DAW VI+AYF+E GLVRQQL S++EF+ TM
Sbjct: 40 GGGDGDGDGEEMEEEADGDPDLRDEIGQDDAWAVISAYFEEKGLVRQQLDSFDEFIQNTM 99
Query: 320 QRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
Q +VDES DI + PE Q+ PGR A T I FGQ+ +SKP TE
Sbjct: 100 QEIVDESADIEIRPESQHNPGRQAEFAETLHKISFGQIYLSKPMMTE 146
[9][TOP]
>UniRef100_P38420 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Arabidopsis
thaliana RepID=RPB2_ARATH
Length = 1188
Score = 98.6 bits (244), Expect = 2e-19
Identities = 49/97 (50%), Positives = 64/97 (65%)
Frame = +2
Query: 170 YNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDI 349
Y + ED +D +I+ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ +VDES DI
Sbjct: 6 YEPEPQYVEDDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 65
Query: 350 VLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+ PE Q+ PG + T I FGQ+ +SKP TE
Sbjct: 66 EIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTE 102
[10][TOP]
>UniRef100_Q1L5Y8 DNA-directed RNA polymerase n=1 Tax=Antirrhinum majus
RepID=Q1L5Y8_ANTMA
Length = 1200
Score = 98.2 bits (243), Expect = 2e-19
Identities = 49/93 (52%), Positives = 63/93 (67%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
+E E+ + DIS EDAW VI+AYF+E GLVRQQL S++EF+ TMQ +VDES DI + P
Sbjct: 18 NENDEEEEEEDISQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRP 77
Query: 362 EDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
E Q+ PG+ T I FGQ+ +SKP TE
Sbjct: 78 ESQHNPGQQPDFAETIYKISFGQIYLSKPMMTE 110
[11][TOP]
>UniRef100_B9FA12 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9FA12_ORYSJ
Length = 1218
Score = 98.2 bits (243), Expect = 2e-19
Identities = 48/87 (55%), Positives = 62/87 (71%)
Frame = +2
Query: 200 PNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVP 379
P++ +I+ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ +VDES DI + PE Q+ P
Sbjct: 45 PDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNP 104
Query: 380 GRDAPDENTKVVIKFGQLRVSKPNFTE 460
GR A T I FGQ+ +SKP TE
Sbjct: 105 GRQAEFAETLHKISFGQIYLSKPMMTE 131
[12][TOP]
>UniRef100_Q1L5Z3 DNA-directed RNA polymerase n=1 Tax=Antirrhinum majus
RepID=Q1L5Z3_ANTMA
Length = 1198
Score = 97.8 bits (242), Expect = 3e-19
Identities = 50/110 (45%), Positives = 68/110 (61%)
Frame = +2
Query: 131 LYDMSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVS 310
+Y D + V D + E+ D DIS EDAW VI++YF+E GLVRQQL S++EF+
Sbjct: 1 MYGGGDPYPDQNVVEVHDHDEEEKEDEDISQEDAWTVISSYFEEKGLVRQQLDSFDEFIQ 60
Query: 311 VTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
TMQ +VDES +I + PE Q+ PG ++ I FGQ+ +SKP TE
Sbjct: 61 NTMQEIVDESSNIEIRPESQHNPGGNSDFAEAMYRISFGQIYLSKPMMTE 110
[13][TOP]
>UniRef100_Q1L5B4 DNA-directed RNA polymerase n=1 Tax=Rhododendron macrophyllum
RepID=Q1L5B4_RHOMC
Length = 1207
Score = 97.4 bits (241), Expect = 4e-19
Identities = 50/110 (45%), Positives = 71/110 (64%)
Frame = +2
Query: 131 LYDMSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVS 310
+ ++ D G+ DG + +D ++ +IS EDAW VI+AYF+E GLVRQQL S++EF+
Sbjct: 17 IVNVGDGGDGDG-------DGDDDDEEEISQEDAWTVISAYFEEKGLVRQQLDSFDEFIQ 69
Query: 311 VTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
TMQ +VDE+ DI + PE Q+ PGR + I FGQ+ +SKP TE
Sbjct: 70 NTMQEIVDEAADIEIKPESQHNPGRQSDFVEMVYRISFGQIYLSKPMMTE 119
[14][TOP]
>UniRef100_Q42877 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Solanum
lycopersicum RepID=RPB2_SOLLC
Length = 1191
Score = 97.1 bits (240), Expect = 6e-19
Identities = 49/99 (49%), Positives = 67/99 (67%), Gaps = 5/99 (5%)
Frame = +2
Query: 179 VDEEYE-----DPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESP 343
+++EYE D ++ +I+ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ +VDES
Sbjct: 3 MEDEYEPQYNVDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA 62
Query: 344 DIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
DI + PE Q+ PG + T I FGQ+ +SKP TE
Sbjct: 63 DIEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTE 101
[15][TOP]
>UniRef100_Q1L5Y9 DNA-directed RNA polymerase n=1 Tax=Petunia x hybrida
RepID=Q1L5Y9_PETHY
Length = 1195
Score = 96.7 bits (239), Expect = 7e-19
Identities = 47/94 (50%), Positives = 64/94 (68%)
Frame = +2
Query: 179 VDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLI 358
++ E E+ + +I+ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ +VDES DI +
Sbjct: 12 MNNEEEEEEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIR 71
Query: 359 PEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
PE Q+ PG + T I FGQ+ +SKP TE
Sbjct: 72 PESQHNPGHQSDFAETIYKINFGQIYLSKPMMTE 105
[16][TOP]
>UniRef100_B9H2V2 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9H2V2_POPTR
Length = 690
Score = 96.3 bits (238), Expect = 9e-19
Identities = 48/92 (52%), Positives = 62/92 (67%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E E+ D +I+ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ +VDES DI + PE
Sbjct: 2 EPEEEDADEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPE 61
Query: 365 DQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
Q+ PG + T I FGQ+ +SKP TE
Sbjct: 62 SQHNPGHQSDFAETIYKISFGQIYLSKPMMTE 93
[17][TOP]
>UniRef100_Q1L5B5 DNA-directed RNA polymerase n=1 Tax=Rhododendron macrophyllum
RepID=Q1L5B5_RHOMC
Length = 1191
Score = 95.5 bits (236), Expect = 2e-18
Identities = 48/96 (50%), Positives = 65/96 (67%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYE---DPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
+EEY+ + + +I+ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ +VDES DI
Sbjct: 6 EEEYDPTMEDEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIE 65
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+ PE Q+ PG + T I FGQ+ +SKP TE
Sbjct: 66 IRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTE 101
[18][TOP]
>UniRef100_Q54J75 DNA-directed RNA polymerase II subunit rpb2 n=1 Tax=Dictyostelium
discoideum RepID=RPB2_DICDI
Length = 1170
Score = 94.7 bits (234), Expect = 3e-18
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Frame = +2
Query: 179 VDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLI 358
++++ +D ADIS ED W VI+AYF E GLVRQQL S++EF+ TMQ ++DESP I L
Sbjct: 6 MNDDSQDNPHADISQEDVWTVISAYFQEKGLVRQQLDSFDEFIQNTMQEIIDESPPITLR 65
Query: 359 PEDQYVPGRDAPDENTKVV-IKFGQLRVSKP 448
PE Q+ PG+ N +KFGQ+ +SKP
Sbjct: 66 PESQHHPGQAVVSNNVSTFSVKFGQIYLSKP 96
[19][TOP]
>UniRef100_Q1L5Z2 DNA-directed RNA polymerase n=1 Tax=Petunia x hybrida
RepID=Q1L5Z2_PETHY
Length = 1203
Score = 94.0 bits (232), Expect = 5e-18
Identities = 49/107 (45%), Positives = 70/107 (65%), Gaps = 2/107 (1%)
Frame = +2
Query: 146 DSGNEDGVYNGVDEEYEDPNDA--DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTM 319
D +D VDE+ +D +D +I+ +DAW VI+AYF+E GLVRQQL S++EF+ TM
Sbjct: 9 DENIDDRTTMAVDEQEDDYDDESQEITQDDAWAVISAYFEEKGLVRQQLDSFDEFIQNTM 68
Query: 320 QRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
Q +VDE+ DI + PE Q+ P R + +T IKF Q+ +S+P TE
Sbjct: 69 QEIVDETADIEIRPESQHNPARQSDFVDTIYKIKFTQIYLSRPMMTE 115
[20][TOP]
>UniRef100_Q1L5Z1 DNA-directed RNA polymerase n=1 Tax=Solanum lycopersicum
RepID=Q1L5Z1_SOLLC
Length = 1205
Score = 93.2 bits (230), Expect = 8e-18
Identities = 49/109 (44%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Frame = +2
Query: 137 DMSDSGNEDGVYNG-VDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSV 313
DM +E G G VDE+ ++ +I+ +DAW VI++YF+E GLVRQQL S++EF+
Sbjct: 13 DMVQVEDEGGEGRGDVDEDEDEDESREITQDDAWAVISSYFEEKGLVRQQLDSFDEFIQN 72
Query: 314 TMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
TMQ +VDE+ DI + PE Q+ P R T IKF Q+ +S+P TE
Sbjct: 73 TMQEIVDETADIEIRPESQHNPSRQPDFVETIYKIKFTQIYLSRPMMTE 121
[21][TOP]
>UniRef100_A4RQU3 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus
CCE9901 RepID=A4RQU3_OSTLU
Length = 1174
Score = 90.5 bits (223), Expect = 5e-17
Identities = 45/90 (50%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Frame = +2
Query: 194 EDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQY 373
ED + +I EDAW VI+++F+E GLVRQQL S+NEF+ TMQ +VDE +I L PE Q+
Sbjct: 7 EDDEEEEIGQEDAWVVISSFFEEKGLVRQQLDSFNEFIQHTMQEIVDEMREIELTPEHQH 66
Query: 374 VPGRDAPDENTKVV-IKFGQLRVSKPNFTE 460
+PG+D K I F Q+ +SKP TE
Sbjct: 67 MPGQDIDSMEKKTYKISFNQIYLSKPMVTE 96
[22][TOP]
>UniRef100_Q1L5Z4 DNA-directed RNA polymerase n=1 Tax=Nicotiana sylvestris
RepID=Q1L5Z4_NICSY
Length = 1203
Score = 90.1 bits (222), Expect = 7e-17
Identities = 49/108 (45%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Frame = +2
Query: 146 DSGNEDGVYNGVDEEYEDPND---ADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVT 316
D +D V VDEE E +I+ +DAW VI+AYF+E GLVRQQL S++EF+ T
Sbjct: 9 DENVDDRVLMAVDEEEEQAEGDEAQEITQDDAWAVISAYFEEKGLVRQQLDSFDEFIQNT 68
Query: 317 MQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
MQ +VDE+ +I + PE Q+ P R T IKF Q+ +S+P TE
Sbjct: 69 MQEIVDETANIEIRPESQHNPSRQPDFVETIYKIKFTQIYLSRPMMTE 116
[23][TOP]
>UniRef100_Q7RQI2 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii
RepID=Q7RQI2_PLAYO
Length = 1312
Score = 87.4 bits (215), Expect = 4e-16
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 6/99 (6%)
Frame = +2
Query: 182 DEEYEDPNDAD----ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDI 349
D+ ED +D D I+ ED+W VI ++F HGLV QQ++SYN+F+ MQ ++DE P+I
Sbjct: 18 DQNIEDVSDKDDEDQITEEDSWIVIGSFFGSHGLVNQQIESYNDFIEYRMQEIIDEHPNI 77
Query: 350 VLIPEDQYVPGRDAPDENTKVV--IKFGQLRVSKPNFTE 460
+ P+ QY P + DEN ++ +KFGQL + +P F E
Sbjct: 78 EIKPQPQYRPDK---DENNNIIYSLKFGQLSLDRPFFDE 113
[24][TOP]
>UniRef100_Q4YWL7 Putative uncharacterized protein (Fragment) n=1 Tax=Plasmodium
berghei RepID=Q4YWL7_PLABE
Length = 467
Score = 87.4 bits (215), Expect = 4e-16
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 6/99 (6%)
Frame = +2
Query: 182 DEEYEDPNDAD----ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDI 349
D+ ED +D D I+ ED+W VI ++F HGLV QQ++SYN+F+ MQ ++DE P+I
Sbjct: 18 DQNLEDVSDKDDDDQITEEDSWIVIGSFFGSHGLVNQQIESYNDFIEYRMQEIIDEHPNI 77
Query: 350 VLIPEDQYVPGRDAPDENTKVV--IKFGQLRVSKPNFTE 460
+ P+ QY P + DEN ++ +KFGQL + +P F E
Sbjct: 78 EIKPQPQYRPDK---DENNNIIYSLKFGQLSLDRPFFDE 113
[25][TOP]
>UniRef100_C1E1U0 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1E1U0_9CHLO
Length = 1178
Score = 85.9 bits (211), Expect = 1e-15
Identities = 41/94 (43%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
+E + +I EDAW VI+++F+E GL RQQL S+NEF+ TMQ +VDE D + P
Sbjct: 3 EENVAVEEEEEIGQEDAWTVISSFFEEKGLARQQLDSFNEFIQHTMQEIVDEMSDFTIEP 62
Query: 362 EDQYVPGRDAPDE-NTKVVIKFGQLRVSKPNFTE 460
E+Q++PG +A + K ++F Q+ +SKP TE
Sbjct: 63 EEQHMPGEEADGKGKKKYKVEFKQIYLSKPMVTE 96
[26][TOP]
>UniRef100_Q1WMR3 DNA-directed RNA polymerase n=1 Tax=Coprinellus disseminatus
RepID=Q1WMR3_COPDI
Length = 1241
Score = 85.9 bits (211), Expect = 1e-15
Identities = 46/95 (48%), Positives = 65/95 (68%)
Frame = +2
Query: 176 GVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVL 355
G+D++ +D A+I+ ED W VI ++FD+ GLVRQQL S++EFV TMQ LVDE+ D++L
Sbjct: 36 GMDDDGDD--FAEITQEDCWTVITSFFDQKGLVRQQLDSFDEFVQNTMQELVDENADLIL 93
Query: 356 IPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
DQ+ G D D + IKFGQ+ +S+P TE
Sbjct: 94 DQADQHT-GHDT-DMTRRYEIKFGQIYLSRPTVTE 126
[27][TOP]
>UniRef100_A8PVJ8 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
RepID=A8PVJ8_MALGO
Length = 1197
Score = 85.5 bits (210), Expect = 2e-15
Identities = 43/90 (47%), Positives = 60/90 (66%)
Frame = +2
Query: 191 YEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQ 370
YED +IS ED W+VI A+F+E GLVRQQ+ S+NEF+S T+Q LV+ES + L DQ
Sbjct: 2 YEDEGVEEISQEDCWDVIKAFFEEKGLVRQQIDSFNEFMSNTVQELVEESKSLTLEQSDQ 61
Query: 371 YVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+ A D+ + I+FGQ+ ++KP TE
Sbjct: 62 HT--GQAEDKTRRYEIEFGQIYMNKPQQTE 89
[28][TOP]
>UniRef100_A8PJ53 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8PJ53_COPC7
Length = 742
Score = 85.5 bits (210), Expect = 2e-15
Identities = 46/92 (50%), Positives = 62/92 (67%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
EEY D + A I+ ED W VI+++FD+ GLVRQQL S++EFV TMQ LVDE+ D++L
Sbjct: 20 EEY-DEDYAPITQEDCWTVISSFFDQKGLVRQQLDSFDEFVQNTMQELVDENSDLILDQA 78
Query: 365 DQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
DQ+ A D + IKFGQ+ +S+P TE
Sbjct: 79 DQHT--GQAGDMTRRYEIKFGQIYLSRPTVTE 108
[29][TOP]
>UniRef100_A8N2R8 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8N2R8_COPC7
Length = 1222
Score = 85.5 bits (210), Expect = 2e-15
Identities = 46/92 (50%), Positives = 62/92 (67%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
EEY D + A I+ ED W VI+++FD+ GLVRQQL S++EFV TMQ LVDE+ D++L
Sbjct: 20 EEY-DEDYAPITQEDCWTVISSFFDQKGLVRQQLDSFDEFVQNTMQELVDENSDLILDQA 78
Query: 365 DQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
DQ+ A D + IKFGQ+ +S+P TE
Sbjct: 79 DQHT--GQAGDMTRRYEIKFGQIYLSRPTVTE 108
[30][TOP]
>UniRef100_B7FVG3 DNA-directed RNA polymerase n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B7FVG3_PHATR
Length = 1212
Score = 84.3 bits (207), Expect = 4e-15
Identities = 47/100 (47%), Positives = 65/100 (65%), Gaps = 8/100 (8%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
+E D ++ ++ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ LVD+S DI + PE
Sbjct: 16 DEVMDIDEIPVTQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQELVDDSGDIRVSPE 75
Query: 365 DQYVPGRD------APDENTKVV--IKFGQLRVSKPNFTE 460
Q++ G D ++ TK V I FGQ+ +SKP E
Sbjct: 76 IQHMVGYDDEAYDREQEKETKFVFEIHFGQVYLSKPTTVE 115
[31][TOP]
>UniRef100_Q4Y5W4 DNA-directed RNA polymerase II second largest subunit, putative
(Fragment) n=1 Tax=Plasmodium chabaudi
RepID=Q4Y5W4_PLACH
Length = 727
Score = 84.3 bits (207), Expect = 4e-15
Identities = 41/97 (42%), Positives = 64/97 (65%), Gaps = 2/97 (2%)
Frame = +2
Query: 176 GVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVL 355
G+++ + +D I+ ED+W VI ++F HGLV QQ++SYN+F+ MQ ++DE P I +
Sbjct: 18 GIEDLSDKDDDDQINEEDSWVVIGSFFG-HGLVNQQIESYNDFIEYRMQEIIDEHPHIEI 76
Query: 356 IPEDQYVPGRDAPDENTKVV--IKFGQLRVSKPNFTE 460
P+ QY P + DENT ++ +KFGQL + +P F E
Sbjct: 77 KPQPQYRPDK---DENTNIIYSLKFGQLSLDRPFFDE 110
[32][TOP]
>UniRef100_UPI00017937B7 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide n=1 Tax=Acyrthosiphon pisum
RepID=UPI00017937B7
Length = 1101
Score = 83.6 bits (205), Expect = 6e-15
Identities = 48/103 (46%), Positives = 67/103 (65%), Gaps = 5/103 (4%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDA-DISAE----DAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLV 331
+Y+ D+EYE+ + DIS+E W VIN+YFDE GLVRQQL S++EF+ +++QR+V
Sbjct: 1 MYDLGDDEYEEEEETEDISSELWQEACWIVINSYFDEKGLVRQQLDSFDEFIQMSVQRIV 60
Query: 332 DESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
++SP I L E Q+ G D TK IKF Q+ +SKP E
Sbjct: 61 EDSPQIELQAESQHTHGE--IDTPTKYQIKFEQIYLSKPTHWE 101
[33][TOP]
>UniRef100_B6AET6 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
RepID=B6AET6_9CRYT
Length = 1184
Score = 83.6 bits (205), Expect = 6e-15
Identities = 38/85 (44%), Positives = 57/85 (67%)
Frame = +2
Query: 206 DADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGR 385
D ++ ED+W +I YF + GLV QQL+S+N+F+ +Q +VDE P IV+IP+ QY P
Sbjct: 7 DDEVQQEDSWALIGTYFRDRGLVSQQLESFNDFIMYKLQEIVDEHPPIVIIPQPQYRPDE 66
Query: 386 DAPDENTKVVIKFGQLRVSKPNFTE 460
D + + V+KFGQL +S+P+ E
Sbjct: 67 QI-DTSIQYVLKFGQLSLSRPSVEE 90
[34][TOP]
>UniRef100_Q67XZ1 DNA-directed RNA polymerase II second largest chain n=1
Tax=Arabidopsis thaliana RepID=Q67XZ1_ARATH
Length = 124
Score = 83.2 bits (204), Expect = 8e-15
Identities = 39/74 (52%), Positives = 52/74 (70%)
Frame = +2
Query: 170 YNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDI 349
Y + ED +D +I+ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ +VDES DI
Sbjct: 6 YEPEPQYVEDDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 65
Query: 350 VLIPEDQYVPGRDA 391
+ PE Q+ PG +
Sbjct: 66 EIRPESQHNPGHQS 79
[35][TOP]
>UniRef100_B6TQP3 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B6TQP3_MAIZE
Length = 126
Score = 83.2 bits (204), Expect = 8e-15
Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 6/89 (6%)
Frame = +2
Query: 143 SDSGNEDGVYNGVDEEYEDPNDAD------ISAEDAWEVINAYFDEHGLVRQQLQSYNEF 304
++ +E G G EE ++ D D I+ +DAW VI+AYF+E GLVRQQL S++EF
Sbjct: 29 AEEDDEVGYGGGGGEEMDEDADGDAEQQEDITQDDAWAVISAYFEEKGLVRQQLDSFDEF 88
Query: 305 VSVTMQRLVDESPDIVLIPEDQYVPGRDA 391
+ TMQ +VDES DI + PE Q+ PGR A
Sbjct: 89 IQNTMQEIVDESADIEIRPESQHNPGRQA 117
[36][TOP]
>UniRef100_A5KBW7 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax
RepID=A5KBW7_PLAVI
Length = 1339
Score = 83.2 bits (204), Expect = 8e-15
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 2/101 (1%)
Frame = +2
Query: 164 GVYNGVDEEYEDPNDAD--ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDE 337
G Y D E+ ++ + I+ ED+W VI ++F HGLV QQ++SYN+F+ MQ ++DE
Sbjct: 12 GEYMHADAPLEEDHEEEERITEEDSWVVIGSFFGSHGLVNQQIESYNDFIEYRMQEIIDE 71
Query: 338 SPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
P I + P+ QY RD ++N +KFGQL + +P + E
Sbjct: 72 HPQIEIRPQPQYRSDRD-DNKNVMYALKFGQLSLDRPFYDE 111
[37][TOP]
>UniRef100_B8C598 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana
CCMP1335 RepID=B8C598_THAPS
Length = 1196
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 8/96 (8%)
Frame = +2
Query: 197 DPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYV 376
D +D ++ EDAW VI+AYF+E GLVRQQL S++EF+ TMQ LVD+S I + PE Q++
Sbjct: 2 DLDDMPVTQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQELVDDSGSIRVSPEIQHL 61
Query: 377 PGRD------APDENTKVV--IKFGQLRVSKPNFTE 460
G D + TK V +KFGQ+ +SKP E
Sbjct: 62 VGYDEANFDETMNSTTKKVFEVKFGQVYLSKPTTVE 97
[38][TOP]
>UniRef100_Q5CY45 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium parvum Iowa II
RepID=Q5CY45_CRYPV
Length = 1177
Score = 82.8 bits (203), Expect = 1e-14
Identities = 39/89 (43%), Positives = 57/89 (64%)
Frame = +2
Query: 194 EDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQY 373
E ND +I ED+W +I YF + GLV QQL+S+N+F+ +Q +VDE P I++ P+ QY
Sbjct: 10 EQKND-EIQQEDSWALIGTYFRDRGLVNQQLESFNDFIMYKLQEIVDEHPPIIITPQSQY 68
Query: 374 VPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
P D + V+KFGQL +S+P+ E
Sbjct: 69 RPDEQI-DTKVRYVLKFGQLSLSRPSVEE 96
[39][TOP]
>UniRef100_Q5CN11 DNA-directed RNA polymerase II second largest chain n=1
Tax=Cryptosporidium hominis RepID=Q5CN11_CRYHO
Length = 733
Score = 82.8 bits (203), Expect = 1e-14
Identities = 39/89 (43%), Positives = 57/89 (64%)
Frame = +2
Query: 194 EDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQY 373
E ND +I ED+W +I YF + GLV QQL+S+N+F+ +Q +VDE P I++ P+ QY
Sbjct: 10 EQKND-EIQQEDSWALIGTYFRDRGLVNQQLESFNDFIMYKLQEIVDEHPPIIITPQSQY 68
Query: 374 VPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
P D + V+KFGQL +S+P+ E
Sbjct: 69 RPDEQI-DTKVRYVLKFGQLSLSRPSVEE 96
[40][TOP]
>UniRef100_Q5KIB7 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q5KIB7_CRYNE
Length = 1193
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/115 (42%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Frame = +2
Query: 128 PLYDMSDS----GNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSY 295
P YD S G+ED +E+Y+ D IS ED W VIN++F+E GLVRQQL+S+
Sbjct: 22 PDYDYSQQTAPKGDED------EEKYDVDEDEPISQEDYWTVINSFFEEKGLVRQQLESF 75
Query: 296 NEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
NEF+ TMQ +VD+ + L QY A DE + I FGQ+ +++ N TE
Sbjct: 76 NEFIENTMQEIVDDHSRLTLDQFTQYT--GVAGDETRRYEISFGQIYLARVNHTE 128
[41][TOP]
>UniRef100_Q55U25 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q55U25_CRYNE
Length = 1245
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/115 (42%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Frame = +2
Query: 128 PLYDMSDS----GNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSY 295
P YD S G+ED +E+Y+ D IS ED W VIN++F+E GLVRQQL+S+
Sbjct: 21 PDYDYSQQTAPKGDED------EEKYDVDEDEPISQEDYWTVINSFFEEKGLVRQQLESF 74
Query: 296 NEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
NEF+ TMQ +VD+ + L QY A DE + I FGQ+ +++ N TE
Sbjct: 75 NEFIENTMQEIVDDHSRLTLDQFTQYT--GVAGDETRRYEISFGQIYLARVNHTE 127
[42][TOP]
>UniRef100_Q4U9X1 DNA-directed RNA polymerase n=1 Tax=Theileria annulata
RepID=Q4U9X1_THEAN
Length = 1223
Score = 81.6 bits (200), Expect = 2e-14
Identities = 38/92 (41%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Frame = +2
Query: 188 EYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPED 367
+Y +D + + ED W+VI ++F+EHGLV QQ++S+N+F++ MQ ++D P I + P+
Sbjct: 47 QYLKRDDENFTEEDTWKVIGSFFNEHGLVHQQIESFNDFITYRMQEIIDSHPPIEITPQP 106
Query: 368 QYVPGRDAPDENTKVV-IKFGQLRVSKPNFTE 460
Y P + EN+ V +KFGQL +SKP+ E
Sbjct: 107 NYRPEEEV--ENSVVYKLKFGQLSLSKPSVEE 136
[43][TOP]
>UniRef100_UPI00015B44D8 PREDICTED: similar to ENSANGP00000011389 n=1 Tax=Nasonia
vitripennis RepID=UPI00015B44D8
Length = 1175
Score = 81.3 bits (199), Expect = 3e-14
Identities = 45/97 (46%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Frame = +2
Query: 182 DEEYEDPNDADISA----EDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDI 349
+E YED + +IS+ E W VINAYFDE GLVRQQL S++EF+ +++QR+V+ESP I
Sbjct: 6 EEHYEDDDSEEISSKVWQEACWIVINAYFDEKGLVRQQLDSFDEFIEMSVQRIVEESPQI 65
Query: 350 VLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G + T+ ++KF Q+ +SKP E
Sbjct: 66 DLQAEAQHRTG--DIETPTRHLVKFEQIYLSKPTHWE 100
[44][TOP]
>UniRef100_UPI0000221AC5 hypothetical protein CBG18197 n=1 Tax=Caenorhabditis briggsae AF16
RepID=UPI0000221AC5
Length = 1194
Score = 81.3 bits (199), Expect = 3e-14
Identities = 50/109 (45%), Positives = 69/109 (63%), Gaps = 4/109 (3%)
Frame = +2
Query: 146 DSGNEDGVYNGVDEEYEDPNDADISA----EDAWEVINAYFDEHGLVRQQLQSYNEFVSV 313
D G +D +G DEEY D A+IS E W VI+AYFDE GLVRQQL S++EFV +
Sbjct: 6 DDGMQD---DGNDEEYSDET-AEISPDAWQEACWVVISAYFDEKGLVRQQLDSFDEFVQM 61
Query: 314 TMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+QR+V++SP + L E+Q++ G D + K +KF Q+ +SKP E
Sbjct: 62 NVQRIVEDSPPVELQSENQHL-GNDM-ENPAKFSLKFNQIYLSKPTHWE 108
[45][TOP]
>UniRef100_B0WKE9 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
RepID=B0WKE9_CULQU
Length = 1176
Score = 80.9 bits (198), Expect = 4e-14
Identities = 47/104 (45%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Frame = +2
Query: 155 NEDGVYNGVDEEYEDPNDA--DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRL 328
NEDG + E EDP + ++ E W VINAYFDE GLVRQQL S++EF+ +++QR+
Sbjct: 4 NEDGDHF----EEEDPEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRI 59
Query: 329 VDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
V++SP I L E Q+ G + T+ V+KF Q+ +SKP E
Sbjct: 60 VEDSPAIELTAEAQHTTG--DIETPTRYVLKFDQIYLSKPTHWE 101
[46][TOP]
>UniRef100_Q27826 DNA-directed RNA polymerase n=1 Tax=Euplotes octocarinatus
RepID=Q27826_EUPOC
Length = 1194
Score = 80.5 bits (197), Expect = 5e-14
Identities = 47/106 (44%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
Frame = +2
Query: 149 SGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRL 328
SG YN +++ D +I+ EDAW VI AYFD+HGLV QQ+ S++ F+S T+Q +
Sbjct: 14 SGGRGDYYN----QHKMDIDDEITQEDAWAVIRAYFDQHGLVSQQISSFDRFLSYTVQDI 69
Query: 329 VDESPDIVLIPEDQYVPG-RDAPDENTKVVIKFGQLRVS-KPNFTE 460
V E+ I + PE Q+ PG + EN K I GQ+RV+ KP F E
Sbjct: 70 VTENNTISIQPELQFAPGSMNESRENIKYDIILGQVRVNEKPRFKE 115
[47][TOP]
>UniRef100_Q4N2K9 DNA-directed RNA polymerase n=1 Tax=Theileria parva
RepID=Q4N2K9_THEPA
Length = 1190
Score = 80.1 bits (196), Expect = 7e-14
Identities = 40/112 (35%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Frame = +2
Query: 128 PLYDMSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFV 307
P YD+ + VDE + + ED W+VI ++F+EHGLV QQ++S+N+F+
Sbjct: 35 PKYDIDQDLDHSQYLKAVDENFTE--------EDTWKVIGSFFNEHGLVHQQIESFNDFI 86
Query: 308 SVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVV-IKFGQLRVSKPNFTE 460
+ MQ ++D P I + P+ Y P + +EN+ + +KFGQL ++KP+ E
Sbjct: 87 TYRMQEIIDAHPPIEITPQPNYRP--EEEEENSILYRLKFGQLSLNKPSVEE 136
[48][TOP]
>UniRef100_O96236 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7
RepID=O96236_PLAF7
Length = 1340
Score = 79.7 bits (195), Expect = 9e-14
Identities = 38/89 (42%), Positives = 58/89 (65%)
Frame = +2
Query: 194 EDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQY 373
++PN+ I+ +D+W VI ++F HGLV QQ++SYN+F+ MQ ++DE P I + P+ QY
Sbjct: 25 KNPNE-QITEDDSWVVIGSFFGSHGLVNQQIESYNDFIEYRMQEIIDEHPKIEIRPQPQY 83
Query: 374 VPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
RD D N +KFGQL + +P + E
Sbjct: 84 RTDRDEND-NIIYSLKFGQLSLDRPFYDE 111
[49][TOP]
>UniRef100_B4R0H5 DNA-directed RNA polymerase n=1 Tax=Drosophila simulans
RepID=B4R0H5_DROSI
Length = 1176
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/102 (43%), Positives = 64/102 (62%), Gaps = 4/102 (3%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDADIS----AEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVD 334
+Y+ +E YE+ N +IS E W VINAYFDE GLVRQQL S++EF+ +++QR+V+
Sbjct: 2 MYDNEEELYEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE 61
Query: 335 ESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+SP I L E Q+ G + + +KF Q+ +SKP E
Sbjct: 62 DSPAIELQAEAQHTSGE--VETPPRFSLKFEQIYLSKPTHWE 101
[50][TOP]
>UniRef100_B4PTC0 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4PTC0_DROYA
Length = 1176
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/102 (43%), Positives = 64/102 (62%), Gaps = 4/102 (3%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDADIS----AEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVD 334
+Y+ +E YE+ N +IS E W VINAYFDE GLVRQQL S++EF+ +++QR+V+
Sbjct: 2 MYDNEEELYEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE 61
Query: 335 ESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+SP I L E Q+ G + + +KF Q+ +SKP E
Sbjct: 62 DSPAIELQAEAQHTSGE--VETPPRFSLKFEQIYLSKPTHWE 101
[51][TOP]
>UniRef100_B4N9I3 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4N9I3_DROWI
Length = 1176
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/102 (43%), Positives = 64/102 (62%), Gaps = 4/102 (3%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDADIS----AEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVD 334
+Y+ +E YE+ N +IS E W VINAYFDE GLVRQQL S++EF+ +++QR+V+
Sbjct: 2 MYDNEEELYEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE 61
Query: 335 ESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+SP I L E Q+ G + + +KF Q+ +SKP E
Sbjct: 62 DSPAIELQAEAQHTSGE--VETPPRFSLKFEQIYLSKPTHWE 101
[52][TOP]
>UniRef100_B3P0M0 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3P0M0_DROER
Length = 1176
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/102 (43%), Positives = 64/102 (62%), Gaps = 4/102 (3%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDADIS----AEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVD 334
+Y+ +E YE+ N +IS E W VINAYFDE GLVRQQL S++EF+ +++QR+V+
Sbjct: 2 MYDNEEELYEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE 61
Query: 335 ESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+SP I L E Q+ G + + +KF Q+ +SKP E
Sbjct: 62 DSPAIELQAEAQHTSGE--VETPPRFSLKFEQIYLSKPTHWE 101
[53][TOP]
>UniRef100_B3LYR3 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3LYR3_DROAN
Length = 1176
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/102 (43%), Positives = 64/102 (62%), Gaps = 4/102 (3%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDADIS----AEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVD 334
+Y+ +E YE+ N +IS E W VINAYFDE GLVRQQL S++EF+ +++QR+V+
Sbjct: 2 MYDNEEELYEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE 61
Query: 335 ESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+SP I L E Q+ G + + +KF Q+ +SKP E
Sbjct: 62 DSPAIELQAEAQHTSGE--VETPPRFSLKFEQIYLSKPTHWE 101
[54][TOP]
>UniRef100_P08266 DNA-directed RNA polymerase II subunit RPB2 n=2 Tax=melanogaster
subgroup RepID=RPB2_DROME
Length = 1176
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/102 (43%), Positives = 64/102 (62%), Gaps = 4/102 (3%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDADIS----AEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVD 334
+Y+ +E YE+ N +IS E W VINAYFDE GLVRQQL S++EF+ +++QR+V+
Sbjct: 2 MYDNEEELYEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE 61
Query: 335 ESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+SP I L E Q+ G + + +KF Q+ +SKP E
Sbjct: 62 DSPAIELQAEAQHTSGE--VETPPRFSLKFEQIYLSKPTHWE 101
[55][TOP]
>UniRef100_UPI0000D5712C PREDICTED: similar to AGAP003648-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D5712C
Length = 1175
Score = 79.0 bits (193), Expect = 2e-13
Identities = 41/102 (40%), Positives = 66/102 (64%), Gaps = 4/102 (3%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDADISAE----DAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVD 334
+Y +++++D +IS+E W VINAYFDE GLVRQQL S++EF+ +++QR+V+
Sbjct: 1 MYEQDEDQFDDEESEEISSELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE 60
Query: 335 ESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+SP I L E Q+ G + ++ ++KF Q+ +SKP E
Sbjct: 61 DSPQIDLQAEAQHTSGE--LENPSRYLLKFEQIYLSKPTHWE 100
[56][TOP]
>UniRef100_B2ADP9 DNA-directed RNA polymerase n=2 Tax=Podospora anserina
RepID=B2ADP9_PODAN
Length = 1278
Score = 79.0 bits (193), Expect = 2e-13
Identities = 46/107 (42%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
Frame = +2
Query: 146 DSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQR 325
D ++D Y DE D ++A I+ ED W+VI+AYFD GLV QQ+ S++EF S T+Q
Sbjct: 16 DEFDDDNNYENGDELGVDQDEAAITPEDCWDVISAYFDMKGLVSQQIDSFDEFTSSTIQS 75
Query: 326 LVDESPDIVLIPEDQYVPGRDAPDENT--KVVIKFGQLRVSKPNFTE 460
LVDE D+ L D PG D + + I FG + +SKP TE
Sbjct: 76 LVDEYADLTL---DHPNPGDDQGRDIALRRYDIHFGNVMISKPTLTE 119
[57][TOP]
>UniRef100_UPI0001926137 PREDICTED: similar to predicted protein n=1 Tax=Hydra
magnipapillata RepID=UPI0001926137
Length = 1426
Score = 78.6 bits (192), Expect = 2e-13
Identities = 44/110 (40%), Positives = 68/110 (61%)
Frame = +2
Query: 131 LYDMSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVS 310
+YD D +D Y+ +E+ D ++ E W VI++YF+E GLVRQQL S++EF+
Sbjct: 1 MYDPIDE--DDDHYDNTEED--DEISKELWQEACWTVISSYFEEKGLVRQQLDSFDEFIQ 56
Query: 311 VTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+++QR+V+ESP I L E QY + +E T+ +KF Q+ +SKP E
Sbjct: 57 MSVQRIVEESPPIELQAETQYT--ENEIEEPTRYQLKFEQIYLSKPTHWE 104
[58][TOP]
>UniRef100_Q7QAK7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7QAK7_ANOGA
Length = 1175
Score = 78.6 bits (192), Expect = 2e-13
Identities = 42/93 (45%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Frame = +2
Query: 188 EYEDPNDA--DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
E EDP + ++ E W VINAYFDE GLVRQQL S++EF+ +++QR+V++SP I L
Sbjct: 10 EEEDPEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVEDSPAIELTA 69
Query: 362 EDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
E Q+ G + T+ ++KF Q+ +SKP E
Sbjct: 70 EAQHSSGE--IENPTRYLLKFDQIYLSKPTHWE 100
[59][TOP]
>UniRef100_Q10578 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Caenorhabditis
elegans RepID=RPB2_CAEEL
Length = 1193
Score = 78.6 bits (192), Expect = 2e-13
Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 11/109 (10%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDAD-------ISAED----AWEVINAYFDEHGLVRQQLQSYNEFVSV 313
+Y+ DE DP D D ISAE W VI+AYFDE GLVRQQL S++EFV +
Sbjct: 1 MYDDEDEMVNDPMDGDYIDDSDEISAEAWQEACWVVISAYFDEKGLVRQQLDSFDEFVQM 60
Query: 314 TMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+QR+V++SP + L E+Q++ G D + K +KF Q+ +SKP E
Sbjct: 61 NVQRIVEDSPPVELQSENQHL-GTDM-ENPAKFSLKFNQIYLSKPTHWE 107
[60][TOP]
>UniRef100_B4K015 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4K015_DROGR
Length = 1175
Score = 78.2 bits (191), Expect = 3e-13
Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 4/102 (3%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDADIS----AEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVD 334
+Y +E +E+ N +IS E W VINAYFDE GLVRQQL S++EF+ +++QR+V+
Sbjct: 1 MYENEEENFEEENVEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE 60
Query: 335 ESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+SP I L E Q+ G + + +KF Q+ +SKP E
Sbjct: 61 DSPAIELQAEAQHTSGE--VETPPRFSLKFEQIYLSKPTHWE 100
[61][TOP]
>UniRef100_B4KDW5 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4KDW5_DROMO
Length = 1176
Score = 77.8 bits (190), Expect = 3e-13
Identities = 42/102 (41%), Positives = 64/102 (62%), Gaps = 4/102 (3%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDADIS----AEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVD 334
+Y+ +E +++ N +IS E W VINAYFDE GLVRQQL S++EF+ +++QR+V+
Sbjct: 2 MYDNEEENFDEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE 61
Query: 335 ESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+SP I L E Q+ G + + +KF Q+ +SKP E
Sbjct: 62 DSPAIELQAEAQHTSGE--VETPPRFSLKFEQIYLSKPTHWE 101
[62][TOP]
>UniRef100_Q298X6 DNA-directed RNA polymerase n=2 Tax=pseudoobscura subgroup
RepID=Q298X6_DROPS
Length = 1176
Score = 77.8 bits (190), Expect = 3e-13
Identities = 43/102 (42%), Positives = 64/102 (62%), Gaps = 4/102 (3%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDADIS----AEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVD 334
+Y+ +E +E+ N +IS E W VINAYFDE GLVRQQL S++EF+ +++QR+V+
Sbjct: 2 MYDNEEELFEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE 61
Query: 335 ESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+SP I L E Q+ G + + +KF Q+ +SKP E
Sbjct: 62 DSPAIELQAEAQHTSGE--VETPPRFSLKFEQIYLSKPTHWE 101
[63][TOP]
>UniRef100_B3L0J5 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H
RepID=B3L0J5_PLAKH
Length = 1371
Score = 77.8 bits (190), Expect = 3e-13
Identities = 37/96 (38%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Frame = +2
Query: 179 VDEEYEDPNDAD--ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
+D E+ +D + I+ ED+W VI ++F HGLV QQ++SYN+F+ MQ ++DE P +
Sbjct: 58 IDAPLEEDHDEEERITEEDSWVVIGSFFGSHGLVNQQIESYNDFIEYRMQEIIDEHPALE 117
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+ P+ QY D +N +KFGQL + +P + E
Sbjct: 118 IRPQAQYRSEGD-EQKNVMYALKFGQLSLDRPFYDE 152
[64][TOP]
>UniRef100_B4M040 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
RepID=B4M040_DROVI
Length = 1176
Score = 77.4 bits (189), Expect = 5e-13
Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 4/102 (3%)
Frame = +2
Query: 167 VYNGVDEEYEDPNDADIS----AEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVD 334
+Y +E +++ N +IS E W VINAYFDE GLVRQQL S++EF+ +++QR+V+
Sbjct: 2 MYENEEENFDEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE 61
Query: 335 ESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+SP I L E Q+ G + + +KF Q+ +SKP E
Sbjct: 62 DSPAIELQAEAQHTSGE--VETPPRFSLKFEQIYLSKPTHWE 101
[65][TOP]
>UniRef100_Q6RYH8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Filobasidiella
neoformans RepID=Q6RYH8_CRYNE
Length = 1114
Score = 77.4 bits (189), Expect = 5e-13
Identities = 40/90 (44%), Positives = 56/90 (62%)
Frame = +2
Query: 191 YEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQ 370
Y+ +D IS ED W V N++F+E GLVRQQL+S+NEF+ TMQ +VD+ + L Q
Sbjct: 32 YDVDDDEPISQEDYWTVTNSFFEEKGLVRQQLESFNEFIETTMQEIVDDHSRLTLDQFTQ 91
Query: 371 YVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
Y A DE + I FGQ+ +++ N TE
Sbjct: 92 YT--GVAGDETRRYEISFGQIYLARVNHTE 119
[66][TOP]
>UniRef100_Q6CAD6 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6CAD6_YARLI
Length = 1229
Score = 77.4 bits (189), Expect = 5e-13
Identities = 40/95 (42%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Frame = +2
Query: 188 EYEDP----NDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVL 355
EYEDP D +I+AED W VI+++F+E GLV QQL S++EF+ T+Q LV E ++L
Sbjct: 3 EYEDPYGYYEDTEITAEDCWTVISSFFNEKGLVSQQLDSFDEFIETTIQELVWEDRTLIL 62
Query: 356 IPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
Q+ D ++N + I FG++ +S+P TE
Sbjct: 63 DQPAQHTTPND--NQNKRFEITFGKIYLSRPTMTE 95
[67][TOP]
>UniRef100_A1D971 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1D971_NEOFI
Length = 1255
Score = 77.4 bits (189), Expect = 5e-13
Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
+EE+ D + I++ED W VI+++FD GLV QQL S++EF+S TMQ LV+E + L
Sbjct: 9 EEEFYDEMEEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTL-- 66
Query: 362 EDQYVPGRDAPDENTKVV-----IKFGQLRVSKPNFTE 460
DQ +P D DE+ VV +KFG + +S+P+ TE
Sbjct: 67 -DQTLPPSD--DEDDPVVLRRYELKFGTVMLSRPSVTE 101
[68][TOP]
>UniRef100_C1ML14 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1ML14_9CHLO
Length = 1172
Score = 77.0 bits (188), Expect = 6e-13
Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Frame = +2
Query: 197 DPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRL-VDESPDIVLIPEDQY 373
+ D +I EDAW VI+++F+E GL RQQL S+NEF+ MQ + VDE L PE Q+
Sbjct: 7 EEEDEEIGQEDAWTVISSFFEEKGLARQQLDSFNEFIQHAMQEIVVDEMSSFELEPEQQH 66
Query: 374 VPGRDAPDENTKVV-IKFGQLRVSKPNFTE 460
VPG + K I F Q+ +SKP TE
Sbjct: 67 VPGEEGEGGEKKTYKISFKQIYLSKPMVTE 96
[69][TOP]
>UniRef100_A7ATA0 DNA-directed RNA polymerase n=1 Tax=Babesia bovis
RepID=A7ATA0_BABBO
Length = 1207
Score = 77.0 bits (188), Expect = 6e-13
Identities = 34/75 (45%), Positives = 52/75 (69%)
Frame = +2
Query: 224 EDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDEN 403
ED+W+VI ++F+ HGLV QQ++S+N+FV+ MQ +D+ P I + P+ QY P D + N
Sbjct: 59 EDSWKVIGSFFNTHGLVHQQIESFNDFVTYRMQETIDQHPPIEITPQPQYHP-EDERENN 117
Query: 404 TKVVIKFGQLRVSKP 448
+KFGQL ++KP
Sbjct: 118 IVYKLKFGQLSLNKP 132
[70][TOP]
>UniRef100_UPI000155BCC7 PREDICTED: similar to RNA polymerase II 140 kDa subunit, partial
n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BCC7
Length = 951
Score = 76.6 bits (187), Expect = 8e-13
Identities = 40/97 (41%), Positives = 64/97 (65%), Gaps = 3/97 (3%)
Frame = +2
Query: 179 VDEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDI 349
VD +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 6 VDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPI 65
Query: 350 VLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 66 DLQAEAQHATGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[71][TOP]
>UniRef100_B3S2W9 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
RepID=B3S2W9_TRIAD
Length = 1196
Score = 76.6 bits (187), Expect = 8e-13
Identities = 39/98 (39%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Frame = +2
Query: 170 YNGVDEEYEDPN-DADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPD 346
Y+ D+ +D + D+ E W VINAYF+E GLVRQQL S++EF+ +++QR+V++SP
Sbjct: 7 YDLTDQPIDDDEIETDLWQEACWVVINAYFNEKGLVRQQLDSFDEFIQMSVQRIVEDSPQ 66
Query: 347 IVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
I + E Q+ + ++ + +KF Q+ +SKP F E
Sbjct: 67 IDIQGETQHHSSEE--QQSVRYQLKFDQIYLSKPTFWE 102
[72][TOP]
>UniRef100_Q2VA54 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum
RepID=Q2VA54_PHANO
Length = 1262
Score = 76.6 bits (187), Expect = 8e-13
Identities = 38/93 (40%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E+YED +I++ED W VI+++FD GLV QQL SY+EF T+Q +V E+ ++L
Sbjct: 10 EDYEDDEGGEITSEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQN 69
Query: 365 DQYVPGRDA-PDENTKVVIKFGQLRVSKPNFTE 460
Y P D+ P + IKFG++ +++P TE
Sbjct: 70 TPYDPDEDSDPIIKRRYEIKFGRVYLARPTHTE 102
[73][TOP]
>UniRef100_Q1HDK3 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria sp. S-93-48
RepID=Q1HDK3_9PLEO
Length = 1262
Score = 76.6 bits (187), Expect = 8e-13
Identities = 38/93 (40%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E+YED +I++ED W VI+++FD GLV QQL SY+EF T+Q +V E+ ++L
Sbjct: 10 EDYEDEEGGEITSEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQN 69
Query: 365 DQYVPGRDA-PDENTKVVIKFGQLRVSKPNFTE 460
Y P D+ P + IKFG++ +++P TE
Sbjct: 70 TPYDPDEDSDPIIKRRYEIKFGRVYLARPTHTE 102
[74][TOP]
>UniRef100_Q1HDK2 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria avenaria f. sp.
triticae RepID=Q1HDK2_9PLEO
Length = 1262
Score = 76.6 bits (187), Expect = 8e-13
Identities = 38/93 (40%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E+YED +I++ED W VI+++FD GLV QQL SY+EF T+Q +V E+ ++L
Sbjct: 10 EDYEDEEGGEITSEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQN 69
Query: 365 DQYVPGRDA-PDENTKVVIKFGQLRVSKPNFTE 460
Y P D+ P + IKFG++ +++P TE
Sbjct: 70 TPYDPDEDSDPIIKRRYEIKFGRVYLARPTHTE 102
[75][TOP]
>UniRef100_Q1HDK1 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria avenaria f. sp.
triticae RepID=Q1HDK1_9PLEO
Length = 1262
Score = 76.6 bits (187), Expect = 8e-13
Identities = 38/93 (40%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E+YED +I++ED W VI+++FD GLV QQL SY+EF T+Q +V E+ ++L
Sbjct: 10 EDYEDDEGGEITSEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQN 69
Query: 365 DQYVPGRDA-PDENTKVVIKFGQLRVSKPNFTE 460
Y P D+ P + IKFG++ +++P TE
Sbjct: 70 TPYDPDEDSDPIIKRRYEIKFGRVYLARPTHTE 102
[76][TOP]
>UniRef100_Q1HDJ9 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria avenaria f. sp.
triticae RepID=Q1HDJ9_9PLEO
Length = 1262
Score = 76.6 bits (187), Expect = 8e-13
Identities = 38/93 (40%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E+YED +I++ED W VI+++FD GLV QQL SY+EF T+Q +V E+ ++L
Sbjct: 10 EDYEDDEGGEITSEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQN 69
Query: 365 DQYVPGRDA-PDENTKVVIKFGQLRVSKPNFTE 460
Y P D+ P + IKFG++ +++P TE
Sbjct: 70 TPYDPDEDSDPIIKRRYEIKFGRVYLARPTHTE 102
[77][TOP]
>UniRef100_Q1HDJ8 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum
RepID=Q1HDJ8_PHANO
Length = 1262
Score = 76.6 bits (187), Expect = 8e-13
Identities = 38/93 (40%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E+YED +I++ED W VI+++FD GLV QQL SY+EF T+Q +V E+ ++L
Sbjct: 10 EDYEDEEGGEITSEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQN 69
Query: 365 DQYVPGRDA-PDENTKVVIKFGQLRVSKPNFTE 460
Y P D+ P + IKFG++ +++P TE
Sbjct: 70 TPYDPDEDSDPIIKRRYEIKFGRVYLARPTHTE 102
[78][TOP]
>UniRef100_Q1HDI7 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria avenaria f. sp.
avenaria RepID=Q1HDI7_9PLEO
Length = 1262
Score = 76.6 bits (187), Expect = 8e-13
Identities = 38/93 (40%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E+YED +I++ED W VI+++FD GLV QQL SY+EF T+Q +V E+ ++L
Sbjct: 10 EDYEDDEGGEITSEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQN 69
Query: 365 DQYVPGRDA-PDENTKVVIKFGQLRVSKPNFTE 460
Y P D+ P + IKFG++ +++P TE
Sbjct: 70 TPYDPDEDSDPIIKRRYEIKFGRVYLARPTHTE 102
[79][TOP]
>UniRef100_Q1HDI5 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria avenaria f. sp.
avenaria RepID=Q1HDI5_9PLEO
Length = 1262
Score = 76.6 bits (187), Expect = 8e-13
Identities = 38/93 (40%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E+YED +I++ED W VI+++FD GLV QQL SY+EF T+Q +V E+ ++L
Sbjct: 10 EDYEDDEGGEITSEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQN 69
Query: 365 DQYVPGRDA-PDENTKVVIKFGQLRVSKPNFTE 460
Y P D+ P + IKFG++ +++P TE
Sbjct: 70 TPYDPDEDSDPIIKRRYEIKFGRVYLARPTHTE 102
[80][TOP]
>UniRef100_Q0U9V8 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum
RepID=Q0U9V8_PHANO
Length = 1252
Score = 76.6 bits (187), Expect = 8e-13
Identities = 38/93 (40%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E+YED +I++ED W VI+++FD GLV QQL SY+EF T+Q +V E+ ++L
Sbjct: 10 EDYEDDEGGEITSEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQN 69
Query: 365 DQYVPGRDA-PDENTKVVIKFGQLRVSKPNFTE 460
Y P D+ P + IKFG++ +++P TE
Sbjct: 70 TPYDPDEDSDPIIKRRYEIKFGRVYLARPTHTE 102
[81][TOP]
>UniRef100_B6HM08 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum
Wisconsin 54-1255 RepID=B6HM08_PENCW
Length = 1255
Score = 76.6 bits (187), Expect = 8e-13
Identities = 42/98 (42%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
+E++ D D I++ED W VI+++FD GLV QQL S++EF+S TMQ LV+E +VL
Sbjct: 9 EEDFYDEADEGITSEDCWTVISSFFDSKGLVSQQLDSFDEFISSTMQELVEEQGQVVL-- 66
Query: 362 EDQYVPGRDAPDENTKVVI-----KFGQLRVSKPNFTE 460
DQ +P + DE +V+ KFG + +S+P+ TE
Sbjct: 67 -DQTLP--PSEDEIEPIVVRRYELKFGTVMLSRPSVTE 101
[82][TOP]
>UniRef100_A2QYC2 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2QYC2_ASPNC
Length = 1256
Score = 76.6 bits (187), Expect = 8e-13
Identities = 43/98 (43%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
++EY D D I++ED W VI+++FD GLV QQL S++EF+S TMQ LV+E + L
Sbjct: 9 EDEYYDDMDEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTL-- 66
Query: 362 EDQYVPGRDAPDENTKVVI-----KFGQLRVSKPNFTE 460
DQ +P + DE VV+ KFG + +S+P+ TE
Sbjct: 67 -DQTLP--PSEDEVDPVVVRRYELKFGTVMLSRPSVTE 101
[83][TOP]
>UniRef100_P90631 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Moneuplotes crassus RepID=P90631_EUPCR
Length = 205
Score = 76.3 bits (186), Expect = 1e-12
Identities = 40/98 (40%), Positives = 61/98 (62%), Gaps = 10/98 (10%)
Frame = +2
Query: 197 DP-NDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQY 373
DP N +I+ EDAW +I AYF +HGLV QQ+ S++ F+S T+Q +V E+ + ++PE QY
Sbjct: 2 DPDNSKEITQEDAWALIKAYFQQHGLVSQQISSFDRFLSYTIQDIVAENSIMSIVPEKQY 61
Query: 374 VP--------GRDAPDENTKVVIKFGQLRVS-KPNFTE 460
P G + D + + I+ GQ++V+ KP F E
Sbjct: 62 APGVRLYLTLGNENQDRDLRYEIELGQVKVNEKPRFKE 99
[84][TOP]
>UniRef100_A9BK63 DNA-directed RNA polymerase n=1 Tax=Cryptophyta RepID=A9BK63_9CRYP
Length = 1222
Score = 76.3 bits (186), Expect = 1e-12
Identities = 36/88 (40%), Positives = 56/88 (63%)
Frame = +2
Query: 197 DPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYV 376
D ND I +D W ++ ++F E+ LVRQQL S+NEF+ TMQ ++D+ P IV+ E
Sbjct: 4 DKNDEIIKQDDMWIILESFFKENNLVRQQLDSFNEFIQNTMQDIIDDIPPIVIKTEFDKF 63
Query: 377 PGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+ ++ K++++FGQL +SKP F E
Sbjct: 64 KSSET-KKSLKLILRFGQLHLSKPTFIE 90
[85][TOP]
>UniRef100_A1CG49 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
RepID=A1CG49_ASPCL
Length = 1257
Score = 76.3 bits (186), Expect = 1e-12
Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
+EE+ D + I++ED W VI+++FD GLV QQL S++EFVS TMQ LV+E + L
Sbjct: 9 EEEFYDDMEEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFVSSTMQELVEEQGQVTL-- 66
Query: 362 EDQYVPGRDAPDENTKVV-----IKFGQLRVSKPNFTE 460
DQ +P D DE VV +KFG + +S+P+ TE
Sbjct: 67 -DQTLPPAD--DEVDPVVLRRYELKFGTVMLSRPSVTE 101
[86][TOP]
>UniRef100_UPI00006A01AA DNA-directed RNA polymerase II subunit RPB2 (EC 2.7.7.6) (RNA
polymerase II subunit B2) (DNA-directed RNA polymerase
II subunit B) (RNA polymerase II subunit 2)
(DNA-directed RNA polymerase II 140 kDa polypeptide).
n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI00006A01AA
Length = 927
Score = 75.5 bits (184), Expect = 2e-12
Identities = 39/97 (40%), Positives = 64/97 (65%), Gaps = 3/97 (3%)
Frame = +2
Query: 179 VDEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDI 349
+D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 6 LDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPI 65
Query: 350 VLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 66 DLQAEAQHTTGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[87][TOP]
>UniRef100_UPI000194C2A3 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide B, 140kDa
n=1 Tax=Taeniopygia guttata RepID=UPI000194C2A3
Length = 1174
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[88][TOP]
>UniRef100_UPI0001795E58 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB2
(RNA polymerase II subunit B2) (DNA-directed RNA
polymerase II subunit B) (RNA polymerase II subunit 2)
(DNA-directed RNA polymerase II 140 kDa polypeptide) n=1
Tax=Equus caballus RepID=UPI0001795E58
Length = 1174
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[89][TOP]
>UniRef100_UPI0000F2D75F PREDICTED: similar to RNA polymerase II 140 kDa subunit n=1
Tax=Monodelphis domestica RepID=UPI0000F2D75F
Length = 1174
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHATGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[90][TOP]
>UniRef100_P30876 DNA-directed RNA polymerase II subunit RPB2 n=2 Tax=Catarrhini
RepID=RPB2_HUMAN
Length = 1174
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[91][TOP]
>UniRef100_UPI00005A2A5C PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
16 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5C
Length = 1173
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[92][TOP]
>UniRef100_UPI00005A2A5B PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
15 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5B
Length = 1179
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[93][TOP]
>UniRef100_UPI00005A2A5A PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
14 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5A
Length = 1175
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[94][TOP]
>UniRef100_UPI00005A2A59 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
13 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A59
Length = 1180
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[95][TOP]
>UniRef100_UPI00005A2A58 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
12 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A58
Length = 1174
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[96][TOP]
>UniRef100_UPI00005A2A57 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
11 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A57
Length = 1180
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[97][TOP]
>UniRef100_UPI00005A2A56 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
10 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A56
Length = 1166
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[98][TOP]
>UniRef100_UPI00005A2A55 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
9 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A55
Length = 1182
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[99][TOP]
>UniRef100_UPI00005A2A54 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
8 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A54
Length = 1173
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[100][TOP]
>UniRef100_UPI00005A2A53 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
7 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A53
Length = 1113
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[101][TOP]
>UniRef100_UPI00005A2A52 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
6 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A52
Length = 1162
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[102][TOP]
>UniRef100_UPI00005A2A51 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
5 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A51
Length = 932
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[103][TOP]
>UniRef100_UPI00005A2A4F PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide B isoform 3 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A2A4F
Length = 193
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[104][TOP]
>UniRef100_UPI0000EB23D9 DNA-directed RNA polymerase II subunit RPB2 (EC 2.7.7.6) (RNA
polymerase II subunit B2) (DNA-directed RNA polymerase
II subunit B) (RNA polymerase II subunit 2)
(DNA-directed RNA polymerase II 140 kDa polypeptide).
n=1 Tax=Canis lupus familiaris RepID=UPI0000EB23D9
Length = 1176
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[105][TOP]
>UniRef100_UPI0000F3357E UPI0000F3357E related cluster n=1 Tax=Bos taurus
RepID=UPI0000F3357E
Length = 1177
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 8 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 67
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 68 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWE 101
[106][TOP]
>UniRef100_UPI0000ECC4A8 polymerase (RNA) II (DNA directed) polypeptide B, 140kDa n=1
Tax=Gallus gallus RepID=UPI0000ECC4A8
Length = 1176
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 8 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 67
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 68 LQAEAQHATGE--VEEPPRYLLKFEQIYLSKPTHWE 101
[107][TOP]
>UniRef100_UPI00003AD7E4 polymerase (RNA) II (DNA directed) polypeptide B, 140kDa n=1
Tax=Gallus gallus RepID=UPI00003AD7E4
Length = 1174
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHATGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[108][TOP]
>UniRef100_Q6PA46 MGC68569 protein n=1 Tax=Xenopus laevis RepID=Q6PA46_XENLA
Length = 949
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHTTGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[109][TOP]
>UniRef100_Q5ZMN9 DNA-directed RNA polymerase n=1 Tax=Gallus gallus
RepID=Q5ZMN9_CHICK
Length = 1174
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEARWIVISSYFDEEGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHATGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[110][TOP]
>UniRef100_A5PJW8 DNA-directed RNA polymerase n=1 Tax=Bos taurus RepID=A5PJW8_BOVIN
Length = 1174
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[111][TOP]
>UniRef100_A8MW88 DNA-directed RNA polymerase (Fragment) n=1 Tax=Homo sapiens
RepID=A8MW88_HUMAN
Length = 1173
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 6 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 65
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 66 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWE 99
[112][TOP]
>UniRef100_A7E6G0 DNA-directed RNA polymerase n=1 Tax=Sclerotinia sclerotiorum 1980
UF-70 RepID=A7E6G0_SCLS1
Length = 1267
Score = 75.1 bits (183), Expect = 2e-12
Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Frame = +2
Query: 188 EYED--PNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
EY+D DA I+AED W VI+++FD GLV QQ+ S++EFV TMQ LV+E+ + L
Sbjct: 9 EYDDFGEEDAGITAEDCWTVISSFFDAKGLVSQQIDSFDEFVQTTMQELVEENSQLTL-- 66
Query: 362 EDQYVP--GRDAPDENTKVVIKFGQLRVSKPNFTE 460
DQ P D P + IKFG + +S+P TE
Sbjct: 67 -DQNNPPSSNDNPIALRRYEIKFGTIMLSRPAMTE 100
[113][TOP]
>UniRef100_Q8CFI7 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Mus musculus
RepID=RPB2_MOUSE
Length = 1174
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHASGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[114][TOP]
>UniRef100_UPI0001B09250 DNA directed RNA polymerase II polypeptide B n=1 Tax=Danio rerio
RepID=UPI0001B09250
Length = 1174
Score = 74.7 bits (182), Expect = 3e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DIQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHTSGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[115][TOP]
>UniRef100_Q6DRH1 RNA polymerase II subunit B (Fragment) n=1 Tax=Danio rerio
RepID=Q6DRH1_DANRE
Length = 562
Score = 74.7 bits (182), Expect = 3e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DIQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHTSGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[116][TOP]
>UniRef100_Q504C7 Polr2b protein n=1 Tax=Danio rerio RepID=Q504C7_DANRE
Length = 366
Score = 74.7 bits (182), Expect = 3e-12
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I
Sbjct: 7 DIQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPID 66
Query: 353 LIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
L E Q+ G +E + ++KF Q+ +SKP E
Sbjct: 67 LQAEAQHTSGE--VEEPPRYLLKFEQIYLSKPTHWE 100
[117][TOP]
>UniRef100_B4DHJ3 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DHJ3_HUMAN
Length = 1167
Score = 74.7 bits (182), Expect = 3e-12
Identities = 38/92 (41%), Positives = 60/92 (65%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
+E +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I L E
Sbjct: 4 DEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDLQAE 63
Query: 365 DQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
Q+ G +E + ++KF Q+ +SKP E
Sbjct: 64 AQHASGE--VEEPPRYLLKFEQIYLSKPTHRE 93
[118][TOP]
>UniRef100_Q0CWW4 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
RepID=Q0CWW4_ASPTN
Length = 1256
Score = 74.7 bits (182), Expect = 3e-12
Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
++E+ D D I++ED W VI+++FD GLV QQL S++EF+S TMQ LV+E + L
Sbjct: 9 EDEFYDEMDEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTL-- 66
Query: 362 EDQYVPGRDAPDENTKVV-----IKFGQLRVSKPNFTE 460
DQ +P + DE +V +KFG + +S+P+ TE
Sbjct: 67 -DQTLPPNE--DEVDPIVLRRYELKFGTVMLSRPSVTE 101
[119][TOP]
>UniRef100_B0YC08 DNA-directed RNA polymerase n=3 Tax=Aspergillus fumigatus
RepID=B0YC08_ASPFC
Length = 1255
Score = 74.7 bits (182), Expect = 3e-12
Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
++E+ D + I++ED W VI+++FD GLV QQL S++EF+S TMQ LV+E + L
Sbjct: 9 EDEFYDEMEEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTL-- 66
Query: 362 EDQYVPGRDAPDENTKVV-----IKFGQLRVSKPNFTE 460
DQ +P + DE+ VV +KFG + +S+P+ TE
Sbjct: 67 -DQTLP--PSEDEDDPVVLRRYELKFGTVMLSRPSVTE 101
[120][TOP]
>UniRef100_C0HA74 DNA-directed RNA polymerase n=1 Tax=Salmo salar RepID=C0HA74_SALSA
Length = 1174
Score = 74.3 bits (181), Expect = 4e-12
Identities = 38/92 (41%), Positives = 60/92 (65%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
+E ED D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I L E
Sbjct: 11 DEDEDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDLQAE 70
Query: 365 DQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
Q+ G ++ + ++KF Q+ +SKP E
Sbjct: 71 AQHTSGE--VEDPPRYLLKFEQIYLSKPTHWE 100
[121][TOP]
>UniRef100_C9J2Y9 Putative uncharacterized protein POLR2B n=1 Tax=Homo sapiens
RepID=C9J2Y9_HUMAN
Length = 100
Score = 74.3 bits (181), Expect = 4e-12
Identities = 38/92 (41%), Positives = 60/92 (65%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
+E +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I L E
Sbjct: 4 DEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDLQAE 63
Query: 365 DQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
Q+ G +E + ++KF Q+ +SKP E
Sbjct: 64 AQHASGE--VEEPPRYLLKFEQIYLSKPTHWE 93
[122][TOP]
>UniRef100_A6S7C1 DNA-directed RNA polymerase n=2 Tax=Botryotinia fuckeliana
RepID=A6S7C1_BOTFB
Length = 1207
Score = 74.3 bits (181), Expect = 4e-12
Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Frame = +2
Query: 188 EYED--PNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
EY+D DA I+AED W VI+++F+ GLV QQL S++EFV TMQ LV+E+ + L
Sbjct: 9 EYDDYGEEDAGITAEDCWTVISSFFEAKGLVSQQLDSFDEFVQTTMQELVEENSQLTL-- 66
Query: 362 EDQYVP--GRDAPDENTKVVIKFGQLRVSKPNFTE 460
DQ P D P + IKFG + +S+P TE
Sbjct: 67 -DQNNPPSSHDNPIALRRYEIKFGTIMLSRPAMTE 100
[123][TOP]
>UniRef100_Q872W7 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
RepID=Q872W7_NEUCR
Length = 1287
Score = 73.9 bits (180), Expect = 5e-12
Identities = 44/114 (38%), Positives = 67/114 (58%), Gaps = 5/114 (4%)
Frame = +2
Query: 134 YDMSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSV 313
YD D+ ++ D+ DPN I+ ED+WEVI++YFD GLV QQ+ S+NEF +
Sbjct: 19 YDNDDNYENLSTFDDEDDG-SDPNA--ITPEDSWEVISSYFDLKGLVSQQIDSFNEFTTD 75
Query: 314 TMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIK-----FGQLRVSKPNFTE 460
T+Q L+DE D+ L D PG DE +++++ FG++ +S+P TE
Sbjct: 76 TVQSLIDEYADLTL---DHPSPG---DDEGREIILRRYDVHFGEIIISRPTLTE 123
[124][TOP]
>UniRef100_B8MU25 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC
10500 RepID=B8MU25_TALSN
Length = 1256
Score = 73.9 bits (180), Expect = 5e-12
Identities = 39/95 (41%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
DE YED + I++ED W VI++YFD GLV QQL S++EF+S TMQ LV+E + +
Sbjct: 10 DEYYEDEEEG-ITSEDCWTVISSYFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTI-- 66
Query: 362 EDQYVPGRDAPDENT--KVVIKFGQLRVSKPNFTE 460
+ P D D + IK+G + +++P+F+E
Sbjct: 67 DQTITPNEDEIDPVVIRRYEIKYGTIMLARPSFSE 101
[125][TOP]
>UniRef100_B6QUV1 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC
18224 RepID=B6QUV1_PENMQ
Length = 1254
Score = 73.9 bits (180), Expect = 5e-12
Identities = 39/95 (41%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
DE YED + I++ED W VI++YFD GLV QQL S++EF+S TMQ LV+E + +
Sbjct: 10 DEYYEDEEEG-ITSEDCWTVISSYFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTI-- 66
Query: 362 EDQYVPGRDAPDENT--KVVIKFGQLRVSKPNFTE 460
+ P D D + IK+G + +++P+F+E
Sbjct: 67 DQTITPNEDEIDPVVIRRYEIKYGTIMLARPSFSE 101
[126][TOP]
>UniRef100_Q6QN96 DNA-directed RNA polymerase n=1 Tax=Cochliobolus heterostrophus
RepID=Q6QN96_COCHE
Length = 1208
Score = 73.6 bits (179), Expect = 7e-12
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Frame = +2
Query: 158 EDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDE 337
EDG+ ++YED D + ED W VI+++FD GLV QQL SY+EF T+Q +V E
Sbjct: 8 EDGM-----DDYEDEEDDRVLPEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKE 62
Query: 338 SPDIVLIPEDQYVPGR-DAPDENTKVVIKFGQLRVSKPNFTE 460
+ ++L Y P D P + IKFG++ +++P TE
Sbjct: 63 NGSVILEQNTPYNPDEDDNPIIKRRYEIKFGRVYLARPTHTE 104
[127][TOP]
>UniRef100_C8VK81 DNA-directed RNA polymerase (EC 2.7.7.6)
[Source:UniProtKB/TrEMBL;Acc:Q9UV95] n=2 Tax=Emericella
nidulans RepID=C8VK81_EMENI
Length = 1252
Score = 73.6 bits (179), Expect = 7e-12
Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 5/94 (5%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
+EEY D D I++ED W VI+++FD GLV QQL S++EF+S T+Q LV+E + L
Sbjct: 9 EEEYYDDMDEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFISSTLQELVEEQGQVTL-- 66
Query: 362 EDQYVPGRDAPDENTKVVI-----KFGQLRVSKP 448
DQ +P + DE VV+ KFG + +S+P
Sbjct: 67 -DQTIP--PSEDEVDPVVVRRYELKFGTVMLSRP 97
[128][TOP]
>UniRef100_B8NK59 DNA-directed RNA polymerase n=2 Tax=Aspergillus RepID=B8NK59_ASPFN
Length = 1254
Score = 73.2 bits (178), Expect = 9e-12
Identities = 40/100 (40%), Positives = 62/100 (62%), Gaps = 7/100 (7%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
++E+ D + I++ED W VI+++FD GLV QQL S++EF+S TMQ LV+E + L
Sbjct: 9 EDEFYDDMEEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTL-- 66
Query: 362 EDQYVPGRDAPDEN-------TKVVIKFGQLRVSKPNFTE 460
DQ +P PDE+ + +KFG + +S+P+ TE
Sbjct: 67 -DQTLP----PDEDEVDPVVVRRYELKFGTVMLSRPSVTE 101
[129][TOP]
>UniRef100_UPI000186D6F3 DNA-directed RNA polymerase II 135 kDa polypeptide, putative n=1
Tax=Pediculus humanus corporis RepID=UPI000186D6F3
Length = 1175
Score = 72.8 bits (177), Expect = 1e-11
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
Frame = +2
Query: 182 DEEYEDPNDA-----DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPD 346
+++YE+ DA ++ E W VIN+YFDE GLVRQQL S++EF+ +++QR+V+++P
Sbjct: 5 EDQYENDEDAGEISSELWQEACWIVINSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDTPI 64
Query: 347 IVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
I L E Q+ G + ++KF Q+ +SKP E
Sbjct: 65 IDLQAEAQHASGE--IENPPHYLLKFEQIYLSKPTHWE 100
[130][TOP]
>UniRef100_A8Q7K3 DNA-directed RNA polymerase n=1 Tax=Brugia malayi
RepID=A8Q7K3_BRUMA
Length = 1185
Score = 72.8 bits (177), Expect = 1e-11
Identities = 42/100 (42%), Positives = 61/100 (61%), Gaps = 7/100 (7%)
Frame = +2
Query: 182 DEEYEDP---NDADISAED----AWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDES 340
D+E E+ D +IS+E W VI+AYFDE GLVRQQL S++EF+ + +QR+V++S
Sbjct: 5 DDETEEALFEEDEEISSEQWQEACWVVISAYFDEKGLVRQQLDSFDEFIQMNVQRIVEDS 64
Query: 341 PDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
P + L E Q+ G + K +KF Q+ +SKP E
Sbjct: 65 PPVELQSEVQHFSG--DVENPIKFALKFDQIYLSKPTHWE 102
[131][TOP]
>UniRef100_A5DVP4 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
RepID=A5DVP4_LODEL
Length = 1238
Score = 72.8 bits (177), Expect = 1e-11
Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Frame = +2
Query: 182 DEEYEDPN--DADISA-----EDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDES 340
D+E +DP DAD+ A ED W VI+++F E GLV QQL S++EF+ T+Q LV E
Sbjct: 4 DQEMDDPYMYDADVEAQNITPEDCWTVISSFFQEKGLVSQQLDSFDEFIESTIQELVWED 63
Query: 341 PDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
++L Q+ +D +N + I FG++ +SKP TE
Sbjct: 64 SHLILDQPAQHTSEKD--HDNKRYEINFGKIYISKPTQTE 101
[132][TOP]
>UniRef100_Q753Q4 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Eremothecium
gossypii RepID=RPB2_ASHGO
Length = 1222
Score = 72.8 bits (177), Expect = 1e-11
Identities = 37/89 (41%), Positives = 59/89 (66%)
Frame = +2
Query: 194 EDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQY 373
+D DA I+AED+W VI+A+F E GLV QQL S+N+F++ T+Q L+ E ++L Q+
Sbjct: 14 DDDEDAPITAEDSWTVISAFFREKGLVSQQLDSFNQFINYTIQDLILEDSTLILEQLAQH 73
Query: 374 VPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+A + + K I FG++ ++KP+ TE
Sbjct: 74 T--TEADNISRKYEISFGKIYLAKPSMTE 100
[133][TOP]
>UniRef100_A7SHD8 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
RepID=A7SHD8_NEMVE
Length = 1182
Score = 72.4 bits (176), Expect = 1e-11
Identities = 38/95 (40%), Positives = 60/95 (63%)
Frame = +2
Query: 176 GVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVL 355
G E+ + D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V++SP+I L
Sbjct: 12 GYGEDEGEDITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDSPEIDL 71
Query: 356 IPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
E Q++ + + V+KF Q+ +SKP E
Sbjct: 72 QAESQHM--TSDTEIPARFVLKFEQIYLSKPTHWE 104
[134][TOP]
>UniRef100_C5FJF0 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
RepID=C5FJF0_NANOT
Length = 1258
Score = 72.4 bits (176), Expect = 1e-11
Identities = 42/98 (42%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Frame = +2
Query: 182 DEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIP 361
D+ Y + + I++ED W VI+A+F+ GLV QQL S++EF+S TMQ LV+E + L
Sbjct: 9 DDVYYEAEEG-ITSEDCWTVISAFFESKGLVSQQLDSFDEFISTTMQELVEEQGQVTL-- 65
Query: 362 EDQYVPGRDAPDENTKVV-----IKFGQLRVSKPNFTE 460
DQ VP D DE VV +KFG + +++P+ TE
Sbjct: 66 -DQTVPPGD--DEQDPVVLRRYELKFGTVMLARPSMTE 100
[135][TOP]
>UniRef100_C4JKI6 DNA-directed RNA polymerase II 138 kDa polypeptide n=1
Tax=Uncinocarpus reesii 1704 RepID=C4JKI6_UNCRE
Length = 884
Score = 72.0 bits (175), Expect = 2e-11
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 10/102 (9%)
Frame = +2
Query: 185 EEYEDPNDAD--------ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDES 340
EEYED D I++ED W VI+++F+ GLV QQL S++EF+S TMQ LV+E
Sbjct: 2 EEYEDEYGEDGYYEAEEGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQ 61
Query: 341 PDIVLIPEDQYVPGRDAPDE--NTKVVIKFGQLRVSKPNFTE 460
+ L + P D PD + +KFG + +++P+ TE
Sbjct: 62 GQVTL--DQTIAPEEDDPDPVLVRRYELKFGTVMLARPSMTE 101
[136][TOP]
>UniRef100_B7QNH8 DNA-directed RNA polymerase n=1 Tax=Ixodes scapularis
RepID=B7QNH8_IXOSC
Length = 1142
Score = 71.6 bits (174), Expect = 3e-11
Identities = 37/92 (40%), Positives = 58/92 (63%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E+ + D+ E W VI+AYFDE GLVRQQL S++EF+ +++QR+V+++P I L E
Sbjct: 11 EDESEEITPDLWQEACWIVISAYFDEKGLVRQQLDSFDEFIQMSVQRIVEDTPQIDLQAE 70
Query: 365 DQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
Q+ G + + ++KF Q+ +SKP E
Sbjct: 71 AQHASGE--IENPPRYLLKFEQIYLSKPTHWE 100
[137][TOP]
>UniRef100_A8XS50 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae
RepID=A8XS50_CAEBR
Length = 1215
Score = 71.6 bits (174), Expect = 3e-11
Identities = 50/124 (40%), Positives = 69/124 (55%), Gaps = 19/124 (15%)
Frame = +2
Query: 146 DSGNEDGVYNGVDEEYEDPNDADISA----EDAWEVINAYFDE---------------HG 268
D G +D +G DEEY D A+IS E W VI+AYFDE G
Sbjct: 12 DDGMQD---DGNDEEYSDET-AEISPDAWQEACWVVISAYFDEKVNFGFFLIKTICMFQG 67
Query: 269 LVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKP 448
LVRQQL S++EFV + +QR+V++SP + L E+Q++ G D + K +KF Q+ +SKP
Sbjct: 68 LVRQQLDSFDEFVQMNVQRIVEDSPPVELQSENQHL-GNDM-ENPAKFSLKFNQIYLSKP 125
Query: 449 NFTE 460
E
Sbjct: 126 THWE 129
[138][TOP]
>UniRef100_C9SGY6 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Verticillium
albo-atrum VaMs.102 RepID=C9SGY6_9PEZI
Length = 1260
Score = 71.6 bits (174), Expect = 3e-11
Identities = 42/109 (38%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
Frame = +2
Query: 140 MSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTM 319
M+ +E+ Y+G +E+ DA I+ ED W VI+++FD GLV QQ+ S++EF + T+
Sbjct: 1 MATEYDEEFDYDGYEED-----DASITPEDCWTVISSFFDSKGLVSQQVDSFDEFTTSTV 55
Query: 320 QRLVDESPDIVLIPEDQYVPGRDAPDENT--KVVIKFGQLRVSKPNFTE 460
Q L+DE I L DQ P D+ + +KFG + VS+P+ TE
Sbjct: 56 QELIDEYSHITL---DQPNPASDSDRAIALRRYEVKFGTVMVSRPSITE 101
[139][TOP]
>UniRef100_C5PAW2 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735
delta SOWgp RepID=C5PAW2_COCP7
Length = 1258
Score = 71.6 bits (174), Expect = 3e-11
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Frame = +2
Query: 131 LYDMSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVS 310
+ + D EDG Y + I++ED W VI+++F+ GLV QQL S++EF+S
Sbjct: 1 MQEYEDEYGEDGYYEA---------EEGITSEDCWTVISSFFESKGLVSQQLDSFDEFIS 51
Query: 311 VTMQRLVDESPDIVLIPEDQYVPGRDAPDE--NTKVVIKFGQLRVSKPNFTE 460
TMQ LV+E + L + P D PD + +KFG + +++P+ TE
Sbjct: 52 TTMQELVEEQGQVTL--DQTIAPDEDDPDPVMVRRYELKFGTVMLARPSMTE 101
[140][TOP]
>UniRef100_P08518 DNA-directed RNA polymerase II subunit RPB2 n=4 Tax=Saccharomyces
cerevisiae RepID=RPB2_YEAST
Length = 1224
Score = 71.6 bits (174), Expect = 3e-11
Identities = 42/107 (39%), Positives = 63/107 (58%)
Frame = +2
Query: 140 MSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTM 319
MSD N + Y+ +ED + A I+AED+W VI+A+F E GLV QQL S+N+FV T+
Sbjct: 1 MSDLANSEKYYDEDPYGFEDES-APITAEDSWAVISAFFREKGLVSQQLDSFNQFVDYTL 59
Query: 320 QRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
Q ++ E ++L Q+ D + + K I FG++ V+KP E
Sbjct: 60 QDIICEDSTLILEQLAQHTTESD--NISRKYEISFGKIYVTKPMVNE 104
[141][TOP]
>UniRef100_UPI0001865901 hypothetical protein BRAFLDRAFT_125505 n=1 Tax=Branchiostoma
floridae RepID=UPI0001865901
Length = 1176
Score = 70.9 bits (172), Expect = 4e-11
Identities = 41/101 (40%), Positives = 62/101 (61%), Gaps = 7/101 (6%)
Frame = +2
Query: 179 VDEEY----EDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDE 337
+DEEY ED D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V++
Sbjct: 4 IDEEYTYQEEDETDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVED 63
Query: 338 SPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
SP I L E Q++ + + ++ F Q+ +SKP E
Sbjct: 64 SPQIDLQAEAQHLTME--AEVPPRYLLNFEQIYLSKPTHWE 102
[142][TOP]
>UniRef100_UPI0000586387 PREDICTED: similar to RNA polymerase II subunit B, partial n=1
Tax=Strongylocentrotus purpuratus RepID=UPI0000586387
Length = 300
Score = 70.9 bits (172), Expect = 4e-11
Identities = 38/92 (41%), Positives = 58/92 (63%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
EE D D E W VI++YFDE GLVRQQL S++EF+ +++QR+V++SP + L E
Sbjct: 11 EEETDDLTPDQWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDSPAVDLQAE 70
Query: 365 DQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
Q++ + T+ ++KF Q+ +SKP E
Sbjct: 71 AQHMTTEQ--EVPTRYLLKFEQIYLSKPTHWE 100
[143][TOP]
>UniRef100_C3Y5U9 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
RepID=C3Y5U9_BRAFL
Length = 1104
Score = 70.9 bits (172), Expect = 4e-11
Identities = 41/101 (40%), Positives = 62/101 (61%), Gaps = 7/101 (6%)
Frame = +2
Query: 179 VDEEY----EDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDE 337
+DEEY ED D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V++
Sbjct: 4 IDEEYTYQEEDETDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVED 63
Query: 338 SPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
SP I L E Q++ + + ++ F Q+ +SKP E
Sbjct: 64 SPQIDLQAEAQHLTME--AEVPPRYLLNFEQIYLSKPTHWE 102
[144][TOP]
>UniRef100_Q6CWA5 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
RepID=Q6CWA5_KLULA
Length = 1221
Score = 70.5 bits (171), Expect = 6e-11
Identities = 37/88 (42%), Positives = 57/88 (64%)
Frame = +2
Query: 197 DPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYV 376
D +A ISAED+W VI+A+F E GLV QQL S+N+F++ T+Q L+ E ++L Q+
Sbjct: 13 DEEEAAISAEDSWTVISAFFREKGLVSQQLDSFNQFINYTIQDLILEDSTLILEQLAQHT 72
Query: 377 PGRDAPDENTKVVIKFGQLRVSKPNFTE 460
D + + K I FG++ ++KP+ TE
Sbjct: 73 TETD--NISRKYEISFGKIYLAKPSMTE 98
[145][TOP]
>UniRef100_Q5A8Y5 DNA-directed RNA polymerase n=2 Tax=Candida albicans
RepID=Q5A8Y5_CANAL
Length = 1234
Score = 70.5 bits (171), Expect = 6e-11
Identities = 40/98 (40%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Frame = +2
Query: 182 DEEYEDPNDAD-----ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPD 346
DE DP D I+ ED W VI ++F E GLV QQL S++EFV ++Q LV E
Sbjct: 4 DESMADPYQYDSIDEPITQEDCWTVITSFFQEKGLVSQQLDSFDEFVETSIQELVWEDSH 63
Query: 347 IVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
++L Q+ +D EN + I FG++ +SKP+ TE
Sbjct: 64 LILDQPAQHTSEKD--HENKRYEITFGKIYISKPSQTE 99
[146][TOP]
>UniRef100_B9W6V2 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
RepID=B9W6V2_CANDC
Length = 1234
Score = 70.5 bits (171), Expect = 6e-11
Identities = 40/98 (40%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Frame = +2
Query: 182 DEEYEDPNDAD-----ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPD 346
DE DP D I+ ED W VI ++F E GLV QQL S++EFV ++Q LV E
Sbjct: 4 DESMADPYQYDSIDEPITQEDCWTVITSFFQEKGLVSQQLDSFDEFVETSIQELVWEDSH 63
Query: 347 IVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
++L Q+ +D EN + I FG++ +SKP+ TE
Sbjct: 64 LILDQPAQHTSEKD--HENKRYEITFGKIYISKPSQTE 99
[147][TOP]
>UniRef100_A4QV56 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
RepID=A4QV56_MAGGR
Length = 1276
Score = 70.5 bits (171), Expect = 6e-11
Identities = 39/107 (36%), Positives = 58/107 (54%)
Frame = +2
Query: 140 MSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTM 319
M++ G D + +Y+ ND +I+AED W VI++YFDE GLV QQ+ SYNEF + T+
Sbjct: 1 MAEYGEMDEYADYEAGDYDAENDDEITAEDCWNVISSYFDEKGLVSQQIDSYNEFTTSTI 60
Query: 320 QRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
Q +VDE + L + P + I G + V++P E
Sbjct: 61 QGIVDEYSVLTLDNPNPPDTFEGKPIRLRRYEIMLGNILVTQPTVKE 107
[148][TOP]
>UniRef100_A3GFG5 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
RepID=A3GFG5_PICST
Length = 1232
Score = 70.5 bits (171), Expect = 6e-11
Identities = 37/90 (41%), Positives = 54/90 (60%)
Frame = +2
Query: 191 YEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQ 370
Y+D + I+ ED W VI+++F E GLV QQL S++EF+ T+Q LV E ++L Q
Sbjct: 10 YDDGDAQSITPEDCWTVISSFFQEKGLVSQQLDSFDEFIETTIQELVWEDSHLILDQPAQ 69
Query: 371 YVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+ D EN + I FG++ +SKP TE
Sbjct: 70 HTSEDD--HENRRYEITFGKIYISKPMQTE 97
[149][TOP]
>UniRef100_A5DHT2 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Pichia
guilliermondii RepID=RPB2_PICGU
Length = 1236
Score = 70.5 bits (171), Expect = 6e-11
Identities = 40/107 (37%), Positives = 60/107 (56%)
Frame = +2
Query: 140 MSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTM 319
MSD ++ +Y D + + I+ ED W VI+++F E GLV QQL S++EF+ T+
Sbjct: 1 MSDQASDPYMY--------DDDSSSITPEDCWTVISSFFQEKGLVSQQLDSFDEFIESTI 52
Query: 320 QRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
Q LV E ++L Q+ D EN + I FG++ +SKP TE
Sbjct: 53 QELVWEDSRLILDQPAQHTSEED--HENRRYEITFGKIYISKPTQTE 97
[150][TOP]
>UniRef100_B6K5Q5 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6K5Q5_SCHJY
Length = 1210
Score = 70.1 bits (170), Expect = 7e-11
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Frame = +2
Query: 191 YEDPN-DADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPED 367
YED + ++ ED W VI++YF+E+ L RQQL S++EFV TMQ +VD+ + L D
Sbjct: 3 YEDYQYNETLTQEDCWTVISSYFEENSLARQQLSSFDEFVQNTMQEIVDDDSTLTL---D 59
Query: 368 QYVPGRDAPDENT-KVVIKFGQLRVSKPNFTE 460
QY A + T + I FGQ+ +S+P TE
Sbjct: 60 QYAQHTGAQGDYTRRYEINFGQIYLSRPTMTE 91
[151][TOP]
>UniRef100_UPI000180B7B7 PREDICTED: similar to POLR2B protein n=1 Tax=Ciona intestinalis
RepID=UPI000180B7B7
Length = 1173
Score = 69.7 bits (169), Expect = 1e-10
Identities = 39/100 (39%), Positives = 60/100 (60%), Gaps = 12/100 (12%)
Frame = +2
Query: 197 DPNDADISAED------------AWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDES 340
D +D D+ AE+ W VI++YFDE GLVRQQL S++EF+ +++QR+V+++
Sbjct: 3 DDDDLDLQAEEEEEISPEMWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDA 62
Query: 341 PDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
P I L E Q+ + TK ++KF Q+ +SKP E
Sbjct: 63 PIIELQAESQHTSTEVSVP--TKYLLKFEQIYLSKPTHWE 100
[152][TOP]
>UniRef100_UPI000151B416 hypothetical protein PGUG_02833 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151B416
Length = 1291
Score = 69.7 bits (169), Expect = 1e-10
Identities = 40/107 (37%), Positives = 59/107 (55%)
Frame = +2
Query: 140 MSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTM 319
MSD ++ +Y D + I+ ED W VI+++F E GLV QQL S++EF+ T+
Sbjct: 56 MSDQASDPYMY--------DDDSLSITPEDCWTVISSFFQEKGLVSQQLDSFDEFIESTI 107
Query: 320 QRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
Q LV E ++L Q+ D EN + I FG++ +SKP TE
Sbjct: 108 QELVWEDSRLILDQPAQHTSEED--HENRRYEITFGKIYISKPTQTE 152
[153][TOP]
>UniRef100_C5DLS0 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS
6340 RepID=C5DLS0_LACTC
Length = 1220
Score = 69.7 bits (169), Expect = 1e-10
Identities = 37/90 (41%), Positives = 60/90 (66%)
Frame = +2
Query: 191 YEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQ 370
YED ++A I+AED+W VI+A+F E GLV QQL S+N+F++ T+Q + E ++L Q
Sbjct: 14 YED-DEASITAEDSWTVISAFFREKGLVSQQLDSFNQFINYTIQDSIVEDSTLILEQLAQ 72
Query: 371 YVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+ +A + + K I FG++ ++KP+ TE
Sbjct: 73 HT--TEADNISRKYEISFGKIYLAKPSMTE 100
[154][TOP]
>UniRef100_B2W4R0 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2W4R0_PYRTR
Length = 1208
Score = 69.7 bits (169), Expect = 1e-10
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
+EYED D + ED W VI+++FD GLV QQL SY+EF T+Q +V E+ ++L
Sbjct: 13 DEYEDEEDR-VLPEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGSVILEQN 71
Query: 365 DQYVPG-RDAPDENTKVVIKFGQLRVSKPNFTE 460
Y P D P + +KFG++ +++P TE
Sbjct: 72 QPYNPDEEDNPIIKRRYEMKFGRVYLARPTHTE 104
[155][TOP]
>UniRef100_C4QZQ7 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4QZQ7_PICPG
Length = 1227
Score = 69.3 bits (168), Expect = 1e-10
Identities = 35/85 (41%), Positives = 55/85 (64%)
Frame = +2
Query: 206 DADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGR 385
D I+ ED W VI+A+F+E GLV QQL S++EF+ ++Q LV E P ++L Q+ +
Sbjct: 9 DDTITTEDCWTVISAFFEEKGLVSQQLDSFDEFMETSIQDLVWEEPRLILDQPAQHTNEK 68
Query: 386 DAPDENTKVVIKFGQLRVSKPNFTE 460
D + N + I+FG++ +S+P TE
Sbjct: 69 D--NINKRYEIRFGKIYLSRPTMTE 91
[156][TOP]
>UniRef100_C5DW43 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS
732 RepID=C5DW43_ZYGRC
Length = 1224
Score = 68.9 bits (167), Expect = 2e-10
Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 7/101 (6%)
Frame = +2
Query: 179 VDEEY--EDP-----NDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDE 337
VDE+Y EDP + I+AED+W VI+A+F E GLV QQL S+N+FV T+Q ++ E
Sbjct: 6 VDEDYYAEDPYGYEDENFPITAEDSWAVISAFFREKGLVSQQLDSFNQFVDYTLQDIISE 65
Query: 338 SPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
++L Q+ D + + K I FG++ V+KP E
Sbjct: 66 DSTLILEQLAQHTTESD--NISRKYEISFGKIYVTKPMVNE 104
[157][TOP]
>UniRef100_C4Y646 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4Y646_CLAL4
Length = 369
Score = 68.9 bits (167), Expect = 2e-10
Identities = 38/96 (39%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Frame = +2
Query: 191 YEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVL----- 355
Y++ + I+ ED W VI+++F E GLV QQL S++EF+ T+Q LV E ++L
Sbjct: 13 YDEDDSNSITPEDCWTVISSFFQEKGLVSQQLDSFDEFIESTIQELVWEDSHLILDQPAQ 72
Query: 356 -IPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
EDQY EN + I FG++ +SKP TE
Sbjct: 73 HTSEDQY--------ENKRFEITFGKIYISKPTQTE 100
[158][TOP]
>UniRef100_C5LHP3 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
RepID=C5LHP3_9ALVE
Length = 993
Score = 68.6 bits (166), Expect = 2e-10
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 6/107 (5%)
Frame = +2
Query: 158 EDGVYNGVDEEYEDPNDAD--ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLV 331
E+ V D + +D +D + I +D+W V +AYF + GLV QQ+ S+++FV+ MQ +V
Sbjct: 88 EEKVAMEEDADLDDDDDVEDEIVQDDSWAVADAYFKDKGLVSQQVGSFDDFVTYKMQEIV 147
Query: 332 DESPDIVLIPEDQYVPGRDAPDE----NTKVVIKFGQLRVSKPNFTE 460
DE P I +IP++Q G ++ ++ +++FGQL ++KP E
Sbjct: 148 DECPPITIIPQNQV--GWESEGARVYMDSSFLVEFGQLSLNKPTVEE 192
[159][TOP]
>UniRef100_C5JQR0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis
SLH14081 RepID=C5JQR0_AJEDS
Length = 1258
Score = 68.6 bits (166), Expect = 2e-10
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 6/99 (6%)
Frame = +2
Query: 182 DEEYEDP----NDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDI 349
+EEY + D I++ED W VI+++F+ GLV QQL S++EF+S TMQ LV+E +
Sbjct: 5 EEEYGEDAYYDQDEGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQGQV 64
Query: 350 VLIPEDQYVPGRDAPDENT--KVVIKFGQLRVSKPNFTE 460
L + P D D + +KFG + +++P+ TE
Sbjct: 65 TL--DQTLAPSEDEIDPVVLRRYELKFGTVMLARPSMTE 101
[160][TOP]
>UniRef100_C5GBN2 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis ER-3
RepID=C5GBN2_AJEDR
Length = 1258
Score = 68.6 bits (166), Expect = 2e-10
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Frame = +2
Query: 176 GVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVL 355
G D Y+ D I++ED W VI+++F+ GLV QQL S++EF+S TMQ LV+E + L
Sbjct: 9 GQDAYYDQ--DEGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQGQVTL 66
Query: 356 IPEDQYVPGRDAPDENT--KVVIKFGQLRVSKPNFTE 460
+ P D D + +KFG + +++P+ TE
Sbjct: 67 --DQTLAPSEDEIDPVVLRRYELKFGTVMLARPSMTE 101
[161][TOP]
>UniRef100_A6R483 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
RepID=A6R483_AJECN
Length = 1743
Score = 68.6 bits (166), Expect = 2e-10
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 6/99 (6%)
Frame = +2
Query: 182 DEEYEDP----NDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDI 349
+EEY + D I++ED W VI+++F+ GLV QQL S++EF+S TMQ LV+E +
Sbjct: 490 EEEYGEDAYYDQDEGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQGQV 549
Query: 350 VLIPEDQYVPGRDAPDENT--KVVIKFGQLRVSKPNFTE 460
L + P D D + +KFG + +++P+ TE
Sbjct: 550 TL--DQTLAPAEDKIDPVVLRRYELKFGTVMLARPSMTE 586
[162][TOP]
>UniRef100_Q6FLD5 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Candida
glabrata RepID=RPB2_CANGA
Length = 1223
Score = 68.6 bits (166), Expect = 2e-10
Identities = 39/104 (37%), Positives = 61/104 (58%)
Frame = +2
Query: 149 SGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRL 328
S + + Y+ +E+ N A I+AED W VI+A+F E GLV QQL S+N+FV T+Q +
Sbjct: 2 SADNEDYYDEDPYGFEEEN-APITAEDTWAVISAFFREKGLVSQQLDSFNQFVDYTLQDI 60
Query: 329 VDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+ E ++L Q+ +D + + K I FG++ V+KP E
Sbjct: 61 ISEDSTLILEQLAQHTTEQD--NISRKYEISFGKIYVTKPMVNE 102
[163][TOP]
>UniRef100_B6KB61 DNA-directed RNA polymerase n=3 Tax=Toxoplasma gondii
RepID=B6KB61_TOXGO
Length = 1259
Score = 68.2 bits (165), Expect = 3e-10
Identities = 31/92 (33%), Positives = 53/92 (57%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
E ++ + + W V++++F HGLV QQL+S+N+FVS +Q ++DE P I + P
Sbjct: 76 EHGDEGEQGSVDQDACWAVVSSFFHSHGLVNQQLESFNDFVSYKIQEIIDEHPPIEIRPT 135
Query: 365 DQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
QY P + + N +K QL +++P+ E
Sbjct: 136 PQYRPEEEV-ESNVIYRLKMDQLSLNRPSVEE 166
[164][TOP]
>UniRef100_C0NB61 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
RepID=C0NB61_AJECG
Length = 1307
Score = 68.2 bits (165), Expect = 3e-10
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 6/99 (6%)
Frame = +2
Query: 182 DEEYEDP----NDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDI 349
+EEY + D I++ED W VI+++F+ GLV QQL S++EF+S TMQ LV+E +
Sbjct: 107 EEEYGEDAYYDQDEGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQGQV 166
Query: 350 VLIPEDQYVPGRDAPDENT--KVVIKFGQLRVSKPNFTE 460
L + P D D + +KFG + +++P+ TE
Sbjct: 167 TL--DQTLAPAEDEIDPVVLRRYELKFGTVMLARPSVTE 203
[165][TOP]
>UniRef100_C1H7W3 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb01 RepID=C1H7W3_PARBA
Length = 1258
Score = 67.4 bits (163), Expect = 5e-10
Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 10/102 (9%)
Frame = +2
Query: 185 EEYEDPNDAD--------ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDES 340
E+YE+ D I++ED W VI+++F+ GLV QQL S++EF+S TMQ LV+E
Sbjct: 2 EDYEEEYGEDVYCEQEEGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQ 61
Query: 341 PDIVLIPEDQYVPGRDAPDENT--KVVIKFGQLRVSKPNFTE 460
+ L + P D D + +KFG + +++P+ TE
Sbjct: 62 GQVTL--DQTLAPSEDEVDPVVLRRYELKFGTVMLARPSMTE 101
[166][TOP]
>UniRef100_C0S0L5 DNA-directed RNA polymerase n=2 Tax=Paracoccidioides brasiliensis
RepID=C0S0L5_PARBP
Length = 1258
Score = 67.4 bits (163), Expect = 5e-10
Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 10/102 (9%)
Frame = +2
Query: 185 EEYEDPNDAD--------ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDES 340
E+YE+ D I++ED W VI+++F+ GLV QQL S++EF+S TMQ LV+E
Sbjct: 2 EDYEEEYGEDVYCEQEEGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQ 61
Query: 341 PDIVLIPEDQYVPGRDAPDENT--KVVIKFGQLRVSKPNFTE 460
+ L + P D D + +KFG + +++P+ TE
Sbjct: 62 GQVTL--DQTLAPSEDEVDPVVLRRYELKFGTVMLARPSMTE 101
[167][TOP]
>UniRef100_B5RV50 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
RepID=B5RV50_DEBHA
Length = 1232
Score = 67.4 bits (163), Expect = 5e-10
Identities = 36/90 (40%), Positives = 56/90 (62%)
Frame = +2
Query: 191 YEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQ 370
Y+D +++ I+ E+ W VI+++F E GLV QQL S++EF+ T+Q LV E ++L Q
Sbjct: 13 YDDDSES-ITPENCWTVISSFFQEKGLVSQQLDSFDEFIETTIQELVWEDSHLILDQPAQ 71
Query: 371 YVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+ D EN + I FG++ +SKP TE
Sbjct: 72 HTSEDD--HENRRYEITFGKIYISKPTQTE 99
[168][TOP]
>UniRef100_C4Q1D7 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni
RepID=C4Q1D7_SCHMA
Length = 1304
Score = 66.2 bits (160), Expect = 1e-09
Identities = 39/110 (35%), Positives = 59/110 (53%)
Frame = +2
Query: 131 LYDMSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVS 310
L D + E Y +D D+ E W VI++YFDE GLVRQQL S++EF+
Sbjct: 119 LEDFEEDDPERQFYGDEQSNEDDEITPDMWQEACWIVISSYFDEKGLVRQQLDSFDEFIQ 178
Query: 311 VTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
++Q++V++SP I L E Q+ G + + +KF Q+ +SK E
Sbjct: 179 TSIQKIVEDSPIIELQAEAQHSGG--ILETPVQYRLKFEQIYLSKATHWE 226
[169][TOP]
>UniRef100_A7TTM7 DNA-directed RNA polymerase n=1 Tax=Vanderwaltozyma polyspora DSM
70294 RepID=A7TTM7_VANPO
Length = 1223
Score = 66.2 bits (160), Expect = 1e-09
Identities = 37/98 (37%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Frame = +2
Query: 170 YNGVDEEYE-DPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPD 346
Y G ++ Y + A I+AED+W VI+++F E GLV QQL S+N+FV T+Q ++ E
Sbjct: 6 YYGDEDPYGFEEETAPITAEDSWAVISSFFREKGLVSQQLDSFNQFVDYTLQDIISEDST 65
Query: 347 IVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
++L Q+ D + + K I FG++ V+KP E
Sbjct: 66 LILEQLAQHTTESD--NISRKYEISFGKIYVTKPMVNE 101
[170][TOP]
>UniRef100_A9UUX4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis
RepID=A9UUX4_MONBE
Length = 1166
Score = 65.9 bits (159), Expect = 1e-09
Identities = 37/89 (41%), Positives = 51/89 (57%)
Frame = +2
Query: 194 EDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQY 373
+D D D E WEVINAYF E GLVRQQL S++ F++ T+Q+++ SP I + QY
Sbjct: 1 DDDADIDNWDEACWEVINAYFREKGLVRQQLDSFDHFITYTVQKIIKNSPPIEVQGRLQY 60
Query: 374 VPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+ + +E K I FGQ + P E
Sbjct: 61 L--SNEIEEPPKHTISFGQAGFALPQHKE 87
[171][TOP]
>UniRef100_Q02061 DNA-directed RNA polymerase II subunit RPB2 n=1
Tax=Schizosaccharomyces pombe RepID=RPB2_SCHPO
Length = 1210
Score = 65.9 bits (159), Expect = 1e-09
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Frame = +2
Query: 191 YEDPN-DADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPED 367
YED + ++ ED W VI+++F+E L RQQL S++EFV TMQ +VD+ + L D
Sbjct: 3 YEDYQYNETLTQEDCWTVISSFFEETSLARQQLFSFDEFVQNTMQEIVDDDSTLTL---D 59
Query: 368 QYVPGRDAP-DENTKVVIKFGQLRVSKPNFTE 460
QY A D + I FGQ+ +S+P TE
Sbjct: 60 QYAQHTGAQGDVTRRYEINFGQIYLSRPTMTE 91
[172][TOP]
>UniRef100_C5MEG3 DNA-directed RNA polymerase n=1 Tax=Candida tropicalis MYA-3404
RepID=C5MEG3_CANTT
Length = 1240
Score = 65.5 bits (158), Expect = 2e-09
Identities = 38/95 (40%), Positives = 56/95 (58%)
Frame = +2
Query: 176 GVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVL 355
G DEE E I+ ED W VI+++F E GLV QQL S++EFV ++Q LV E ++L
Sbjct: 12 GYDEEIET-----ITQEDCWTVISSFFQEKGLVSQQLDSFDEFVETSIQELVWEDSHLIL 66
Query: 356 IPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
Q+ D +N + I+FG++ +SK + TE
Sbjct: 67 DQPAQHTSVAD--HKNKRYEIEFGKIYISKTSQTE 99
[173][TOP]
>UniRef100_C9JZW8 Putative uncharacterized protein POLR2B n=1 Tax=Homo sapiens
RepID=C9JZW8_HUMAN
Length = 76
Score = 64.3 bits (155), Expect = 4e-09
Identities = 30/66 (45%), Positives = 46/66 (69%)
Frame = +2
Query: 185 EEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPE 364
+E +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P I L E
Sbjct: 4 DEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDLQAE 63
Query: 365 DQYVPG 382
Q+ G
Sbjct: 64 AQHASG 69
[174][TOP]
>UniRef100_Q98RY5 DNA-directed RNA polymerase n=1 Tax=Guillardia theta
RepID=Q98RY5_GUITH
Length = 1206
Score = 63.9 bits (154), Expect = 5e-09
Identities = 29/86 (33%), Positives = 51/86 (59%)
Frame = +2
Query: 203 NDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPG 382
N+++ + W ++ +F + GLV QQ+ S+N F+ TMQ ++D+ P I + ++ PG
Sbjct: 2 NNSNFDIDILWHILKLFFIQKGLVDQQINSFNNFIQNTMQDIIDDMPPITVYIDND--PG 59
Query: 383 RDAPDENTKVVIKFGQLRVSKPNFTE 460
D ++VI+ GQL +SKP + E
Sbjct: 60 NDDLLSKIRMVIRLGQLHLSKPTYIE 85
[175][TOP]
>UniRef100_UPI00017B4CC9 UPI00017B4CC9 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B4CC9
Length = 1147
Score = 63.2 bits (152), Expect = 9e-09
Identities = 31/72 (43%), Positives = 50/72 (69%)
Frame = +2
Query: 245 NAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKF 424
++YFDE GLVRQQL S++EF+ +++QR+V+++P I L E Q+ G +E + ++KF
Sbjct: 4 SSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDLQAEAQHTSGE--VEEPPRYLLKF 61
Query: 425 GQLRVSKPNFTE 460
Q+ +SKP E
Sbjct: 62 EQIYLSKPTHWE 73
[176][TOP]
>UniRef100_Q4T1Y4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon
nigroviridis RepID=Q4T1Y4_TETNG
Length = 1217
Score = 63.2 bits (152), Expect = 9e-09
Identities = 31/72 (43%), Positives = 50/72 (69%)
Frame = +2
Query: 245 NAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKF 424
++YFDE GLVRQQL S++EF+ +++QR+V+++P I L E Q+ G +E + ++KF
Sbjct: 4 SSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDLQAEAQHTSGE--VEEPPRYLLKF 61
Query: 425 GQLRVSKPNFTE 460
Q+ +SKP E
Sbjct: 62 EQIYLSKPTHWE 73
[177][TOP]
>UniRef100_Q8SR75 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Encephalitozoon
cuniculi RepID=RPB2_ENCCU
Length = 1141
Score = 62.8 bits (151), Expect = 1e-08
Identities = 29/81 (35%), Positives = 53/81 (65%)
Frame = +2
Query: 206 DADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGR 385
++ + E +W +I+++F++ GLVRQQL S+++FV MQ +++ESP I++ Q P
Sbjct: 2 ESAFTKEHSWSIISSFFEQKGLVRQQLDSFDQFVKTKMQEVINESPVIIV----QSAPTA 57
Query: 386 DAPDENTKVVIKFGQLRVSKP 448
+ ++ ++FGQ+ VSKP
Sbjct: 58 GI-ETQKRIAVRFGQIYVSKP 77
[178][TOP]
>UniRef100_Q1L5A7 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Spinacia oleracea RepID=Q1L5A7_SPIOL
Length = 495
Score = 62.4 bits (150), Expect = 2e-08
Identities = 31/61 (50%), Positives = 40/61 (65%)
Frame = +2
Query: 278 QQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFT 457
QQL S++EF+ TMQ +VDES DI + PE Q+ PG + T IKFGQ+ +SKP T
Sbjct: 1 QQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYKIKFGQIYLSKPMMT 60
Query: 458 E 460
E
Sbjct: 61 E 61
[179][TOP]
>UniRef100_Q2GU47 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
RepID=Q2GU47_CHAGB
Length = 1182
Score = 61.6 bits (148), Expect = 3e-08
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +2
Query: 182 DEEYEDPNDAD--ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVL 355
+ E ED D D I+ ED W+VI ++FD GLV QQ+ S++EF S T+Q LVDE
Sbjct: 31 EAELEDAEDTDDTITTEDTWDVIQSHFDCKGLVAQQIDSFDEFTSTTIQSLVDEVTKRAR 90
Query: 356 IPEDQYVPGRDAPDENTKVVIKFGQ 430
+ ++ V +D +E + + + G+
Sbjct: 91 VAINEEVALKDMDEEQQEYMARTGE 115
[180][TOP]
>UniRef100_Q4Q6P8 DNA-directed RNA polymerase n=1 Tax=Leishmania major
RepID=Q4Q6P8_LEIMA
Length = 1185
Score = 61.2 bits (147), Expect = 3e-08
Identities = 33/75 (44%), Positives = 53/75 (70%)
Frame = +2
Query: 158 EDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDE 337
+DG+ + D+E +PND D+ +ED WEVI+++F E GLV QQL SYN+F+ + + +++ E
Sbjct: 17 DDGIVDEHDDE--NPND-DLDSEDIWEVISSFFREKGLVHQQLDSYNDFL-MRIPKMI-E 71
Query: 338 SPDIVLIPEDQYVPG 382
S ++ +DQY PG
Sbjct: 72 SMAVIPRQDDQYDPG 86
[181][TOP]
>UniRef100_C4V8X8 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01
RepID=C4V8X8_NOSCE
Length = 1143
Score = 60.8 bits (146), Expect = 4e-08
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +2
Query: 224 EDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDEN 403
E +W++I+ +F++ GLV QQ+ S+++FV MQ ++DESP I + + G +
Sbjct: 8 EYSWDIISKFFEQKGLVGQQIDSFDQFVKTKMQEVIDESPLITV--QSTLSAGNET---R 62
Query: 404 TKVVIKFGQLRVSK-PNFTE 460
K+ +KFGQ+ VSK P++TE
Sbjct: 63 KKITLKFGQIYVSKPPSYTE 82
[182][TOP]
>UniRef100_A4I6A8 DNA-directed RNA polymerase n=1 Tax=Leishmania infantum
RepID=A4I6A8_LEIIN
Length = 1181
Score = 60.5 bits (145), Expect = 6e-08
Identities = 32/70 (45%), Positives = 51/70 (72%)
Frame = +2
Query: 173 NGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIV 352
+G+D+E +PND D+ +ED WEVI+++F E GLV QQL SYN+F+ + + +++ ES ++
Sbjct: 18 DGIDDE--NPND-DLDSEDIWEVISSFFREKGLVHQQLDSYNDFL-MRIPKMI-ESMAVI 72
Query: 353 LIPEDQYVPG 382
+DQY PG
Sbjct: 73 PRQDDQYDPG 82
[183][TOP]
>UniRef100_A1RWW6 DNA-directed RNA polymerase n=1 Tax=Thermofilum pendens Hrk 5
RepID=A1RWW6_THEPD
Length = 1130
Score = 60.1 bits (144), Expect = 8e-08
Identities = 34/84 (40%), Positives = 45/84 (53%)
Frame = +2
Query: 209 ADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRD 388
A +S ED W V+ AY DE GLVRQ L S+N F+ +Q +VDE I +
Sbjct: 8 AKLSREDRWRVVKAYVDELGLVRQHLDSFNAFLERGLQEIVDEVGGIKV----------- 56
Query: 389 APDENTKVVIKFGQLRVSKPNFTE 460
E+ V IKFG++ V +P F E
Sbjct: 57 ---ESQGVEIKFGKIEVGQPTFRE 77
[184][TOP]
>UniRef100_A4HIZ1 DNA-directed RNA polymerase n=1 Tax=Leishmania braziliensis
RepID=A4HIZ1_LEIBR
Length = 1185
Score = 59.7 bits (143), Expect = 1e-07
Identities = 33/75 (44%), Positives = 52/75 (69%)
Frame = +2
Query: 158 EDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDE 337
+DG + D+E +PND D+ +ED WEVI+++F E GLV QQL SYN+F+ + + +++ E
Sbjct: 17 DDGFIDERDDE--NPND-DLDSEDIWEVISSFFREKGLVHQQLDSYNDFL-MRIPKMI-E 71
Query: 338 SPDIVLIPEDQYVPG 382
S ++ +DQY PG
Sbjct: 72 SMAVIPRQDDQYDPG 86
[185][TOP]
>UniRef100_Q583H5 DNA-directed RNA polymerase n=1 Tax=Trypanosoma brucei
RepID=Q583H5_9TRYP
Length = 1190
Score = 59.3 bits (142), Expect = 1e-07
Identities = 31/86 (36%), Positives = 50/86 (58%)
Frame = +2
Query: 194 EDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQY 373
E+ N ADI +ED WE+I+++F E GLV QQ+ SYN+F+ + + R+ +IV +DQ+
Sbjct: 31 ENVNTADIDSEDIWEIISSFFREKGLVHQQVDSYNDFL-LRIPRMARSLLEIVPRQDDQF 89
Query: 374 VPGRDAPDENTKVVIKFGQLRVSKPN 451
PG E + + + V P+
Sbjct: 90 DPGVHVESEPDQYRLSLEDVVVGNPS 115
[186][TOP]
>UniRef100_C9ZN35 DNA-directed RNA polymerase II subunit 2, putative n=1
Tax=Trypanosoma brucei gambiense DAL972
RepID=C9ZN35_TRYBG
Length = 1189
Score = 59.3 bits (142), Expect = 1e-07
Identities = 31/86 (36%), Positives = 50/86 (58%)
Frame = +2
Query: 194 EDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQY 373
E+ N ADI +ED WE+I+++F E GLV QQ+ SYN+F+ + + R+ +IV +DQ+
Sbjct: 30 ENVNTADIDSEDIWEIISSFFREKGLVHQQVDSYNDFL-LRIPRMARSLLEIVPRQDDQF 88
Query: 374 VPGRDAPDENTKVVIKFGQLRVSKPN 451
PG E + + + V P+
Sbjct: 89 DPGVHVESEPDQYRLSLEDVVVGNPS 114
[187][TOP]
>UniRef100_C9JMN3 Putative uncharacterized protein POLR2B n=1 Tax=Homo sapiens
RepID=C9JMN3_HUMAN
Length = 64
Score = 59.3 bits (142), Expect = 1e-07
Identities = 26/57 (45%), Positives = 43/57 (75%), Gaps = 3/57 (5%)
Frame = +2
Query: 182 DEEYEDPNDA---DISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESP 343
D +Y++ +D D+ E W VI++YFDE GLVRQQL S++EF+ +++QR+V+++P
Sbjct: 7 DMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAP 63
[188][TOP]
>UniRef100_C4PBI7 DNA-directed RNA polymerase n=1 Tax=Epichloe festucae
RepID=C4PBI7_9HYPO
Length = 1261
Score = 58.5 bits (140), Expect = 2e-07
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 DEEYED--PNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVL 355
D +YE+ +D I+ ED W VI+++F+ GLV QQ S++EF T+Q LV+E I L
Sbjct: 7 DYDYENYGEDDEGITPEDCWTVISSFFETKGLVSQQTDSFDEFTQTTIQDLVNEYSTITL 66
Query: 356 -IPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
P PG + IKFG + VS+P +E
Sbjct: 67 DQPNPPSPPG--IKIALRRYEIKFGTVMVSRPTISE 100
[189][TOP]
>UniRef100_C6A1F9 DNA-directed RNA polymerase n=1 Tax=Thermococcus sibiricus MM 739
RepID=C6A1F9_THESM
Length = 1118
Score = 58.5 bits (140), Expect = 2e-07
Identities = 30/87 (34%), Positives = 46/87 (52%)
Frame = +2
Query: 200 PNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVP 379
P +++ +D W ++ AY+DE GLVRQ L SYN F+ MQ ++ E +
Sbjct: 4 PTIVEVTPDDLWHIMKAYWDEKGLVRQHLDSYNAFIEHGMQEVISEFEGV---------- 53
Query: 380 GRDAPDENTKVVIKFGQLRVSKPNFTE 460
D PD +KFG++R+ +P F E
Sbjct: 54 KPDIPD----FEVKFGRVRLGEPEFQE 76
[190][TOP]
>UniRef100_C3N7P9 DNA-directed RNA polymerase n=2 Tax=Sulfolobus islandicus
RepID=C3N7P9_SULIY
Length = 1131
Score = 58.5 bits (140), Expect = 2e-07
Identities = 29/84 (34%), Positives = 46/84 (54%)
Frame = +2
Query: 209 ADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRD 388
+++S ++ W+VI AYF GLVRQ L SYN+FV +Q ++DE +I
Sbjct: 6 SNLSIDEKWKVIEAYFKSKGLVRQHLDSYNDFVRNKLQEIIDEQGEI------------- 52
Query: 389 APDENTKVVIKFGQLRVSKPNFTE 460
P E + ++ G++R+ KP E
Sbjct: 53 -PTEIPGLKVRLGKIRIGKPRVRE 75
[191][TOP]
>UniRef100_C3MY98 DNA-directed RNA polymerase n=3 Tax=Sulfolobus islandicus
RepID=C3MY98_SULIM
Length = 1131
Score = 58.5 bits (140), Expect = 2e-07
Identities = 29/84 (34%), Positives = 46/84 (54%)
Frame = +2
Query: 209 ADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRD 388
+++S ++ W+VI AYF GLVRQ L SYN+FV +Q ++DE +I
Sbjct: 6 SNLSIDEKWKVIEAYFKSKGLVRQHLDSYNDFVRNKLQEIIDEQGEI------------- 52
Query: 389 APDENTKVVIKFGQLRVSKPNFTE 460
P E + ++ G++R+ KP E
Sbjct: 53 -PTEIPGLKVRLGKIRIGKPRVRE 75
[192][TOP]
>UniRef100_C3MRK2 DNA-directed RNA polymerase n=1 Tax=Sulfolobus islandicus L.S.2.15
RepID=C3MRK2_SULIL
Length = 1131
Score = 58.5 bits (140), Expect = 2e-07
Identities = 29/84 (34%), Positives = 46/84 (54%)
Frame = +2
Query: 209 ADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRD 388
+++S ++ W+VI AYF GLVRQ L SYN+FV +Q ++DE +I
Sbjct: 6 SNLSIDEKWKVIEAYFKSKGLVRQHLDSYNDFVRNKLQEIIDEQGEI------------- 52
Query: 389 APDENTKVVIKFGQLRVSKPNFTE 460
P E + ++ G++R+ KP E
Sbjct: 53 -PTEIPGLKVRLGKIRIGKPRVRE 75
[193][TOP]
>UniRef100_B6YT15 DNA-directed RNA polymerase n=1 Tax=Thermococcus onnurineus NA1
RepID=B6YT15_THEON
Length = 1120
Score = 58.5 bits (140), Expect = 2e-07
Identities = 32/87 (36%), Positives = 47/87 (54%)
Frame = +2
Query: 200 PNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVP 379
P D++ +D W V+ AY+ E GLVRQ L SYN F+ MQ++++E I
Sbjct: 4 PTVVDVTPDDLWLVMEAYWKEKGLVRQHLDSYNAFIDYGMQQVINEFGGI---------- 53
Query: 380 GRDAPDENTKVVIKFGQLRVSKPNFTE 460
D PD +KFG++R+ +P F E
Sbjct: 54 KPDIPD----FEVKFGKIRLGEPEFQE 76
[194][TOP]
>UniRef100_B8YB55 DNA-directed RNA polymerase n=1 Tax=Sulfolobus shibatae B12
RepID=B8YB55_SULSH
Length = 1131
Score = 58.5 bits (140), Expect = 2e-07
Identities = 29/84 (34%), Positives = 46/84 (54%)
Frame = +2
Query: 209 ADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRD 388
+++S ++ W+VI AYF GLVRQ L SYN+FV +Q ++DE +I
Sbjct: 6 SNLSIDERWKVIEAYFKSKGLVRQHLDSYNDFVRNKLQEIIDEQGEI------------- 52
Query: 389 APDENTKVVIKFGQLRVSKPNFTE 460
P E + ++ G++R+ KP E
Sbjct: 53 -PTEIPGLKVRLGKIRIGKPRVRE 75
[195][TOP]
>UniRef100_P31814 DNA-directed RNA polymerase subunit B n=1 Tax=Thermococcus celer
RepID=RPOB_THECE
Length = 1122
Score = 58.5 bits (140), Expect = 2e-07
Identities = 32/87 (36%), Positives = 46/87 (52%)
Frame = +2
Query: 200 PNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVP 379
P D++ +D W V+ AY+ E GLVRQ L SYN F+ MQ ++DE +
Sbjct: 6 PTVVDVTPDDLWLVMEAYWKEKGLVRQHLDSYNAFIDHGMQEVIDEFGGV---------- 55
Query: 380 GRDAPDENTKVVIKFGQLRVSKPNFTE 460
D PD +KFG++R+ +P F E
Sbjct: 56 KPDIPD----FEVKFGKVRLGEPEFQE 78
[196][TOP]
>UniRef100_Q4CRQ2 DNA-directed RNA polymerase II subunit 2, putative (Fragment) n=1
Tax=Trypanosoma cruzi RepID=Q4CRQ2_TRYCR
Length = 617
Score = 58.2 bits (139), Expect = 3e-07
Identities = 32/98 (32%), Positives = 53/98 (54%)
Frame = +2
Query: 158 EDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDE 337
EDG VD E+ DI +ED WE+I+++F E GLV QQ+ SYN+F+ + + R+
Sbjct: 17 EDGADYTVDGEHA--GSTDIDSEDIWEIISSFFREKGLVHQQIDSYNDFL-LRIPRMARS 73
Query: 338 SPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPN 451
+IV ++Q+ PG E + + + + P+
Sbjct: 74 LLEIVPRQDEQFEPGTQTETEPDQYRLSLEDVVIGNPS 111
[197][TOP]
>UniRef100_O59226 DNA-directed RNA polymerase n=1 Tax=Pyrococcus horikoshii
RepID=O59226_PYRHO
Length = 1117
Score = 58.2 bits (139), Expect = 3e-07
Identities = 32/87 (36%), Positives = 47/87 (54%)
Frame = +2
Query: 200 PNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVP 379
P +++ +D W V+ +Y++E GLVRQ L SYN F+ +Q +VDE I
Sbjct: 4 PTVVEVTPDDLWIVMESYWEEKGLVRQHLDSYNAFIERGLQEVVDEFGGI---------- 53
Query: 380 GRDAPDENTKVVIKFGQLRVSKPNFTE 460
D PD +KFG++RV +P F E
Sbjct: 54 KPDIPD----FEVKFGKIRVGEPEFQE 76
[198][TOP]
>UniRef100_C7ZA30 Putative uncharacterized protein n=1 Tax=Nectria haematococca mpVI
77-13-4 RepID=C7ZA30_NECH7
Length = 1261
Score = 57.8 bits (138), Expect = 4e-07
Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Frame = +2
Query: 140 MSDSGNEDGVYNGVDEEYEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTM 319
M+D E Y+ D++ E I+ ED W VI+++F+ GLV QQ S++EF T+
Sbjct: 1 MADYEEELSDYDNYDDQEEG-----ITPEDCWTVISSFFESKGLVSQQTDSFDEFTQTTI 55
Query: 320 QRLVDESPDIVL-IPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
Q LV+E I L P PG + IKFG + VS+P +E
Sbjct: 56 QDLVNEYSVISLDQPNPPSPPG--VSIALRRYEIKFGSVMVSRPTISE 101
[199][TOP]
>UniRef100_Q9V115 DNA-directed RNA polymerase n=1 Tax=Pyrococcus abyssi
RepID=Q9V115_PYRAB
Length = 1117
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/87 (36%), Positives = 46/87 (52%)
Frame = +2
Query: 200 PNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVP 379
P +++ +D W V+ +Y+ E GLVRQ L SYN F+ +Q +VDE I
Sbjct: 4 PTVVEVTPDDLWIVMESYWQEKGLVRQHLDSYNAFIDRGLQEVVDEFGGI---------- 53
Query: 380 GRDAPDENTKVVIKFGQLRVSKPNFTE 460
D PD +KFG++RV +P F E
Sbjct: 54 KPDIPD----FEVKFGKIRVGEPEFQE 76
[200][TOP]
>UniRef100_A4YCQ8 DNA-directed RNA polymerase n=1 Tax=Metallosphaera sedula DSM 5348
RepID=A4YCQ8_METS5
Length = 1124
Score = 57.4 bits (137), Expect = 5e-07
Identities = 28/82 (34%), Positives = 45/82 (54%)
Frame = +2
Query: 215 ISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAP 394
+S +D W ++ AYF GLVRQ L S+N+F+ +Q ++DE +I+ +PG
Sbjct: 2 LSVDDRWVIVEAYFKSRGLVRQHLDSFNDFIKNKLQEIIDEQGEII-----TEIPG---- 52
Query: 395 DENTKVVIKFGQLRVSKPNFTE 460
+ I+ G++RV KP E
Sbjct: 53 -----LKIRLGKIRVGKPRVRE 69
[201][TOP]
>UniRef100_Q01GR5 RPB2_LYCES DNA-directed RNA polymerase II 135 kDa polypeptide (ISS)
n=1 Tax=Ostreococcus tauri RepID=Q01GR5_OSTTA
Length = 86
Score = 57.0 bits (136), Expect = 6e-07
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 6/65 (9%)
Frame = +2
Query: 155 NEDGVYNGVDEEYEDPND------ADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVT 316
+ED V VD ED + A+ EDAW VI+++F+E GLVRQQL S+NEF+ T
Sbjct: 5 DEDDVDMRVDGHEEDEEEEIGQGRAERLQEDAWVVISSFFEEKGLVRQQLDSFNEFIQHT 64
Query: 317 MQRLV 331
MQ +V
Sbjct: 65 MQEIV 69
[202][TOP]
>UniRef100_Q980R0 DNA-directed RNA polymerase, subunit B'' (RpoB2) n=1 Tax=Sulfolobus
solfataricus RepID=Q980R0_SULSO
Length = 480
Score = 57.0 bits (136), Expect = 6e-07
Identities = 28/84 (33%), Positives = 45/84 (53%)
Frame = +2
Query: 209 ADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRD 388
++++ ++ W VI AYF GLVRQ L SYN+FV +Q ++DE +I
Sbjct: 3 SNLTIDERWRVIEAYFKSKGLVRQHLDSYNDFVRNKLQEIIDEQGEI------------- 49
Query: 389 APDENTKVVIKFGQLRVSKPNFTE 460
P E + ++ G++R+ KP E
Sbjct: 50 -PTEIPGLKVRLGKIRIGKPRVRE 72
[203][TOP]
>UniRef100_Q8U0M3 DNA-directed RNA polymerase n=1 Tax=Pyrococcus furiosus
RepID=Q8U0M3_PYRFU
Length = 1117
Score = 57.0 bits (136), Expect = 6e-07
Identities = 32/87 (36%), Positives = 46/87 (52%)
Frame = +2
Query: 200 PNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVP 379
P D++ +D W V+ +Y+ E GLVRQ L SYN F+ +Q +V+E I
Sbjct: 4 PTVVDVTPDDLWIVMESYWQEKGLVRQHLDSYNAFIERGLQEVVNEFGGI---------- 53
Query: 380 GRDAPDENTKVVIKFGQLRVSKPNFTE 460
D PD +KFG++RV +P F E
Sbjct: 54 KPDIPD----FEVKFGKIRVGEPEFQE 76
[204][TOP]
>UniRef100_C5SSJ4 DNA-directed RNA polymerase n=1 Tax=Sulfolobus solfataricus 98/2
RepID=C5SSJ4_SULSO
Length = 1124
Score = 57.0 bits (136), Expect = 6e-07
Identities = 28/84 (33%), Positives = 45/84 (53%)
Frame = +2
Query: 209 ADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRD 388
++++ ++ W VI AYF GLVRQ L SYN+FV +Q ++DE +I
Sbjct: 3 SNLTIDERWRVIEAYFKSKGLVRQHLDSYNDFVRNKLQEIIDEQGEI------------- 49
Query: 389 APDENTKVVIKFGQLRVSKPNFTE 460
P E + ++ G++R+ KP E
Sbjct: 50 -PTEIPGLKVRLGKIRIGKPRVRE 72
[205][TOP]
>UniRef100_A2E7H8 DNA-directed RNA polymerase n=1 Tax=Trichomonas vaginalis G3
RepID=A2E7H8_TRIVA
Length = 1177
Score = 55.5 bits (132), Expect = 2e-06
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Frame = +2
Query: 191 YEDPNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQ 370
Y D N+ + S D W VI+ +F+ GLV+QQL+SYN F++ + ++D+ I L DQ
Sbjct: 8 YVDANEDNWSQNDMWMVISKFFENRGLVKQQLKSYNSFINNCVDSVLDDKGHITL-QSDQ 66
Query: 371 YVPGR---------DAPDENTKVVIKFGQLRVSKPNFTE 460
+ + D D+ + I FG V +P E
Sbjct: 67 LLANKIKMDFNSNDDDEDQGKTIHISFGTSTVLRPTTPE 105
[206][TOP]
>UniRef100_A8AA81 DNA-directed RNA polymerase n=1 Tax=Ignicoccus hospitalis KIN4/I
RepID=A8AA81_IGNH4
Length = 1132
Score = 55.5 bits (132), Expect = 2e-06
Identities = 23/42 (54%), Positives = 33/42 (78%)
Frame = +2
Query: 224 EDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDI 349
ED W ++ AYF E GLV QQL+SYN+FV+ TMQ+L++E ++
Sbjct: 11 EDRWAIMRAYFKEKGLVSQQLESYNKFVTETMQKLIEELGEV 52
[207][TOP]
>UniRef100_B5IVZ8 DNA-directed RNA polymerase n=1 Tax=Thermococcus barophilus MP
RepID=B5IVZ8_9EURY
Length = 1118
Score = 54.7 bits (130), Expect = 3e-06
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Frame = +2
Query: 200 PNDADISAEDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDE----SPDIVLIPED 367
P +++ +D W V+ +Y++E GLVRQ L SYN F+ MQ +++E PDI
Sbjct: 4 PTVVEVTPDDLWSVMESYWNEKGLVRQHLDSYNAFIDHGMQEVINEFGGIKPDI------ 57
Query: 368 QYVPGRDAPDENTKVVIKFGQLRVSKPNFTE 460
+KFG++R+ +P F E
Sbjct: 58 ------------PNFEVKFGKIRLGEPEFQE 76
[208][TOP]
>UniRef100_C5Y8Y9 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5Y8Y9_SORBI
Length = 1239
Score = 54.3 bits (129), Expect = 4e-06
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Frame = +2
Query: 155 NEDGVYNGVDEEYED-PNDADISAEDAW--EVINAYFDEHGLVRQQLQSYNEFVSVTMQR 325
N+D E Y + P D + + + + E ++FDE GL+ Q+ SYNEFVS +Q
Sbjct: 73 NDDVNGKSSSEPYSNAPIDMSVESLEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQE 132
Query: 326 LVDESPDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNF 454
L D ++++ E Y P + +IKFG++++ KP F
Sbjct: 133 LFDSLGEVIV--EPGYDPSKKGSGGWKHAIIKFGRVKLEKPVF 173
[209][TOP]
>UniRef100_B4FHF6 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FHF6_MAIZE
Length = 267
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +2
Query: 236 EVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVV 415
E ++FDE GL+ Q+ SYNEFVS +Q L D ++++ E Y P + +
Sbjct: 93 EASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIV--EPGYDPSKKGSGSWKHAI 150
Query: 416 IKFGQLRVSKPNF 454
IKFG++++ KP F
Sbjct: 151 IKFGRVKLEKPVF 163
[210][TOP]
>UniRef100_Q07DU9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Zea mays
RepID=Q07DU9_MAIZE
Length = 1170
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +2
Query: 236 EVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVV 415
E ++FDE GL+ Q+ SYNEFVS +Q L D ++++ E Y P + +
Sbjct: 34 EASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIV--EPGYDPSKKGSGGWKHAI 91
Query: 416 IKFGQLRVSKPNF 454
IKFG++++ KP F
Sbjct: 92 IKFGRVKLEKPVF 104
[211][TOP]
>UniRef100_C5WRS0 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5WRS0_SORBI
Length = 1228
Score = 53.5 bits (127), Expect = 7e-06
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Frame = +2
Query: 173 NGVDEEYEDPNDADISAED----AWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDES 340
NG E D+S E E ++FDE GL+ Q+ SYN+FVS +Q L D
Sbjct: 67 NGKSSEPYSNAPIDLSVESLEKFCKEASRSFFDEVGLISHQINSYNDFVSHGLQELFDSL 126
Query: 341 PDIVLIPEDQYVPGRDAPDENTKVVIKFGQLRVSKPNF 454
++++ E Y P + +IKFG++++ KP F
Sbjct: 127 GEVIV--EPGYDPSKKGSGGWKHAIIKFGRVKLEKPVF 162
[212][TOP]
>UniRef100_A9CSV4 DNA-directed RNA polymerase n=1 Tax=Enterocytozoon bieneusi H348
RepID=A9CSV4_ENTBH
Length = 1138
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/75 (36%), Positives = 46/75 (61%)
Frame = +2
Query: 224 EDAWEVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDEN 403
E+ W +I ++FD+ GLVRQQL S+N+FV + MQ ++DE+ I + + +P E
Sbjct: 19 ENNWAIITSFFDQKGLVRQQLDSFNQFVKIKMQEIIDENSIISV----KSIPTAGNSIER 74
Query: 404 TKVVIKFGQLRVSKP 448
++ + FGQ+ + P
Sbjct: 75 -EIKLYFGQISILGP 88
[213][TOP]
>UniRef100_Q7XTQ7 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q7XTQ7_ORYSJ
Length = 1343
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/73 (36%), Positives = 41/73 (56%)
Frame = +2
Query: 236 EVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVV 415
E ++FDE GL+ Q+ SYNEFVS +Q L D ++ + E Y P P +
Sbjct: 153 EASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTV--EPSYDPSNRGPGGWRHAI 210
Query: 416 IKFGQLRVSKPNF 454
IKFG++++ +P F
Sbjct: 211 IKFGRVQLEEPVF 223
[214][TOP]
>UniRef100_Q7F9D6 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q7F9D6_ORYSJ
Length = 1316
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/73 (36%), Positives = 41/73 (56%)
Frame = +2
Query: 236 EVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVV 415
E ++FDE GL+ Q+ SYNEFVS +Q L D ++ + E Y P P +
Sbjct: 153 EASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTV--EPSYDPSNRGPGGWRHAI 210
Query: 416 IKFGQLRVSKPNF 454
IKFG++++ +P F
Sbjct: 211 IKFGRVQLEEPVF 223
[215][TOP]
>UniRef100_Q259Y6 DNA-directed RNA polymerase n=1 Tax=Oryza sativa RepID=Q259Y6_ORYSA
Length = 1343
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/73 (36%), Positives = 41/73 (56%)
Frame = +2
Query: 236 EVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVV 415
E ++FDE GL+ Q+ SYNEFVS +Q L D ++ + E Y P P +
Sbjct: 153 EASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTV--EPSYDPSNRGPGGWRHAI 210
Query: 416 IKFGQLRVSKPNF 454
IKFG++++ +P F
Sbjct: 211 IKFGRVQLEEPVF 223
[216][TOP]
>UniRef100_Q0J9N2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Oryza sativa
Japonica Group RepID=Q0J9N2_ORYSJ
Length = 1270
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/73 (36%), Positives = 41/73 (56%)
Frame = +2
Query: 236 EVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVV 415
E ++FDE GL+ Q+ SYNEFVS +Q L D ++ + E Y P P +
Sbjct: 107 EASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTV--EPSYDPSNRGPGGWRHAI 164
Query: 416 IKFGQLRVSKPNF 454
IKFG++++ +P F
Sbjct: 165 IKFGRVQLEEPVF 177
[217][TOP]
>UniRef100_B9FCT0 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9FCT0_ORYSJ
Length = 1185
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/73 (36%), Positives = 41/73 (56%)
Frame = +2
Query: 236 EVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVV 415
E ++FDE GL+ Q+ SYNEFVS +Q L D ++ + E Y P P +
Sbjct: 89 EASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTV--EPSYDPSNRGPGGWRHAI 146
Query: 416 IKFGQLRVSKPNF 454
IKFG++++ +P F
Sbjct: 147 IKFGRVQLEEPVF 159
[218][TOP]
>UniRef100_B8AV78 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group
RepID=B8AV78_ORYSI
Length = 1177
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/73 (36%), Positives = 41/73 (56%)
Frame = +2
Query: 236 EVINAYFDEHGLVRQQLQSYNEFVSVTMQRLVDESPDIVLIPEDQYVPGRDAPDENTKVV 415
E ++FDE GL+ Q+ SYNEFVS +Q L D ++ + E Y P P +
Sbjct: 89 EASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTV--EPSYDPSNRGPGGWRHAI 146
Query: 416 IKFGQLRVSKPNF 454
IKFG++++ +P F
Sbjct: 147 IKFGRVQLEEPVF 159