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[1][TOP]
>UniRef100_C1MMA9 Predicted protein (Fragment) n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MMA9_9CHLO
Length = 676
Score = 87.0 bits (214), Expect = 7e-16
Identities = 67/167 (40%), Positives = 81/167 (48%), Gaps = 2/167 (1%)
Frame = +2
Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196
L G VLFVSPERLL+ERF S +R PGG
Sbjct: 111 LRAGKFKVLFVSPERLLNERFLSDLRTV---------------------------PGG-- 141
Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376
VSL V+DEAHC+SEWSHNFRPAY L R+ R P VLAL+AT
Sbjct: 142 ----VSLAVVDEAHCVSEWSHNFRPAYHRL---------GRILRARLRADCP-VLALSAT 187
Query: 377 ASVATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLL 511
A+ T ++ + LR P V +DV R NL LS +R P+ + LL
Sbjct: 188 ATARTEKSLRAQLRIPREGVHRNDVIRPNLILSAMRVPSNSREATLL 234
[2][TOP]
>UniRef100_Q7X829 OJ991113_30.2 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q7X829_ORYSJ
Length = 927
Score = 85.5 bits (210), Expect = 2e-15
Identities = 63/172 (36%), Positives = 81/172 (47%), Gaps = 2/172 (1%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
RL G + VLFVSPER L+E F R
Sbjct: 370 RLRAGEIKVLFVSPERFLNEEFLLIFR--------------------------------- 396
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
+P+SLV +DEAHCISEWSHNFRP+YL L +L R + +LA+TA
Sbjct: 397 -DTLPISLVAIDEAHCISEWSHNFRPSYLRLRASL----------LRRKLNVQCILAMTA 445
Query: 374 TASVATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
TA+ T I +AL P+ ++ + R NLQLSI T D +L L+ LL
Sbjct: 446 TATTQTLEEIMNALEIPSDNLIQTSQIRENLQLSI---STSDNRLKDLMLLL 494
[3][TOP]
>UniRef100_Q7FAH0 OJ000223_09.17 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q7FAH0_ORYSJ
Length = 874
Score = 85.5 bits (210), Expect = 2e-15
Identities = 63/172 (36%), Positives = 81/172 (47%), Gaps = 2/172 (1%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
RL G + VLFVSPER L+E F R
Sbjct: 369 RLRAGEIKVLFVSPERFLNEEFLLIFR--------------------------------- 395
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
+P+SLV +DEAHCISEWSHNFRP+YL L +L R + +LA+TA
Sbjct: 396 -DTLPISLVAIDEAHCISEWSHNFRPSYLRLRASL----------LRRKLNVQCILAMTA 444
Query: 374 TASVATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
TA+ T I +AL P+ ++ + R NLQLSI T D +L L+ LL
Sbjct: 445 TATTQTLEEIMNALEIPSDNLIQTSQIRENLQLSI---STSDNRLKDLMLLL 493
[4][TOP]
>UniRef100_Q0JC83 Os04g0486800 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q0JC83_ORYSJ
Length = 873
Score = 85.5 bits (210), Expect = 2e-15
Identities = 63/172 (36%), Positives = 81/172 (47%), Gaps = 2/172 (1%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
RL G + VLFVSPER L+E F R
Sbjct: 369 RLRAGEIKVLFVSPERFLNEEFLLIFR--------------------------------- 395
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
+P+SLV +DEAHCISEWSHNFRP+YL L +L R + +LA+TA
Sbjct: 396 -DTLPISLVAIDEAHCISEWSHNFRPSYLRLRASL----------LRRKLNVQCILAMTA 444
Query: 374 TASVATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
TA+ T I +AL P+ ++ + R NLQLSI T D +L L+ LL
Sbjct: 445 TATTQTLEEIMNALEIPSDNLIQTSQIRENLQLSI---STSDNRLKDLMLLL 493
[5][TOP]
>UniRef100_C5YAX5 Putative uncharacterized protein Sb06g020690 n=1 Tax=Sorghum
bicolor RepID=C5YAX5_SORBI
Length = 567
Score = 85.5 bits (210), Expect = 2e-15
Identities = 63/170 (37%), Positives = 81/170 (47%), Gaps = 2/170 (1%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
RL G + VLFVSPER L+E F R DG
Sbjct: 66 RLRGGEIKVLFVSPERFLNEEFLLIFR---------------------------DG---- 94
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
+P+SLV +DEAHCISEWSHNFRP+YL L +L R + +LA+TA
Sbjct: 95 ---LPISLVAIDEAHCISEWSHNFRPSYLRLRASL----------LRRKLNVQCILAMTA 141
Query: 374 TASVATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLR 517
TA+ T I +AL P+ ++ + R NLQLSI + L LLL+
Sbjct: 142 TATTQTLEEIVTALEIPSDNLIKTSQIRDNLQLSISTSNNRLKDLLLLLK 191
[6][TOP]
>UniRef100_B9FFT7 Putative uncharacterized protein n=2 Tax=Oryza sativa
RepID=B9FFT7_ORYSJ
Length = 926
Score = 85.5 bits (210), Expect = 2e-15
Identities = 63/172 (36%), Positives = 81/172 (47%), Gaps = 2/172 (1%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
RL G + VLFVSPER L+E F R
Sbjct: 369 RLRAGEIKVLFVSPERFLNEEFLLIFR--------------------------------- 395
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
+P+SLV +DEAHCISEWSHNFRP+YL L +L R + +LA+TA
Sbjct: 396 -DTLPISLVAIDEAHCISEWSHNFRPSYLRLRASL----------LRRKLNVQCILAMTA 444
Query: 374 TASVATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
TA+ T I +AL P+ ++ + R NLQLSI T D +L L+ LL
Sbjct: 445 TATTQTLEEIMNALEIPSDNLIQTSQIRENLQLSI---STSDNRLKDLMLLL 493
[7][TOP]
>UniRef100_UPI0001982B7E PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001982B7E
Length = 941
Score = 84.0 bits (206), Expect = 6e-15
Identities = 59/156 (37%), Positives = 76/156 (48%), Gaps = 3/156 (1%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
+L EG + VLFVSPER L+ F S + A GP
Sbjct: 387 QLREGTIKVLFVSPERFLNAEFLSIVSA---------------------------GP--- 416
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHL-ADALHGSPGSRLFPPRGSPHAPAVLALT 370
P+SLVV+DEAHC+SEWSHNFRP+Y+ L A LH +A +LA+T
Sbjct: 417 ----PISLVVVDEAHCVSEWSHNFRPSYMRLRASLLH-----------AVLNAKCILAMT 461
Query: 371 ATASVATAAAITSALRTP--TVVASDVARTNLQLSI 472
ATA+ T A+ AL P ++ R NLQLS+
Sbjct: 462 ATATSRTLHAVMHALEIPAANLIQKAQLRDNLQLSV 497
[8][TOP]
>UniRef100_A7QBR8 Chromosome chr1 scaffold_75, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QBR8_VITVI
Length = 682
Score = 84.0 bits (206), Expect = 6e-15
Identities = 59/156 (37%), Positives = 76/156 (48%), Gaps = 3/156 (1%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
+L EG + VLFVSPER L+ F S + A GP
Sbjct: 126 QLREGTIKVLFVSPERFLNAEFLSIVSA---------------------------GP--- 155
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHL-ADALHGSPGSRLFPPRGSPHAPAVLALT 370
P+SLVV+DEAHC+SEWSHNFRP+Y+ L A LH +A +LA+T
Sbjct: 156 ----PISLVVVDEAHCVSEWSHNFRPSYMRLRASLLH-----------AVLNAKCILAMT 200
Query: 371 ATASVATAAAITSALRTP--TVVASDVARTNLQLSI 472
ATA+ T A+ AL P ++ R NLQLS+
Sbjct: 201 ATATSRTLHAVMHALEIPAANLIQKAQLRDNLQLSV 236
[9][TOP]
>UniRef100_B9RMM3 Rothmund-thomson syndrome DNA helicase recq4, putative n=1
Tax=Ricinus communis RepID=B9RMM3_RICCO
Length = 852
Score = 82.8 bits (203), Expect = 1e-14
Identities = 56/152 (36%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Frame = +2
Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202
EGA+ VLFVSPER L+ F SF+ A +
Sbjct: 347 EGAIKVLFVSPERFLNVEFLSFISATS--------------------------------- 373
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
+SL+V+DEAHCISEWSHNFRP+Y+ L +L R + ++A+TATA+
Sbjct: 374 --ISLLVVDEAHCISEWSHNFRPSYMRLRASL----------LRSTLKVGCIIAMTATAT 421
Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSI 472
T I SAL P+ +V + R NLQLS+
Sbjct: 422 TTTLNVIMSALDIPSSNLVQNSQLRDNLQLSV 453
[10][TOP]
>UniRef100_C1E6F3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E6F3_9CHLO
Length = 652
Score = 82.0 bits (201), Expect = 2e-14
Identities = 66/171 (38%), Positives = 82/171 (47%), Gaps = 2/171 (1%)
Frame = +2
Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196
L G + VLFVSPERLL+ERF S +R PGG
Sbjct: 49 LRAGRLKVLFVSPERLLNERFLSDLRCV---------------------------PGG-- 79
Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376
VSL V+DEAHC+SEWSHNFRPAY L R+ R P VLAL+AT
Sbjct: 80 ----VSLAVVDEAHCVSEWSHNFRPAYHRL---------GRILQSRLQLQGP-VLALSAT 125
Query: 377 ASVATAAAITSALRTPTVVA--SDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
A+ T + S L P A +D R NL L+ +R P +++ P L +L
Sbjct: 126 ATARTERHLRSQLCIPKEGAYRNDTIRPNLTLAAMRVP-ANSRDPTLFYML 175
[11][TOP]
>UniRef100_Q8W028 Helicase n=2 Tax=Arabidopsis thaliana RepID=Q8W028_ARATH
Length = 870
Score = 81.6 bits (200), Expect = 3e-14
Identities = 56/155 (36%), Positives = 74/155 (47%), Gaps = 2/155 (1%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
+L EG + VLFVSPERLL+ F S R
Sbjct: 312 KLKEGIIKVLFVSPERLLNVEFLSMFRMS------------------------------- 340
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
+ VSLVV+DEAHC+SEWSHNFRP+Y+ L S LF A +LA+TA
Sbjct: 341 ---LSVSLVVVDEAHCVSEWSHNFRPSYMRL-------KASMLF---SELKAECILAMTA 387
Query: 374 TASVATAAAITSALRTPT--VVASDVARTNLQLSI 472
TA+ T A+ S+L P+ ++ R N +LS+
Sbjct: 388 TATTMTLQAVMSSLEIPSTNLIQKSQLRDNFELSV 422
[12][TOP]
>UniRef100_Q0WVW7 Putative ATP-dependent DNA helicase RecQ n=1 Tax=Arabidopsis
thaliana RepID=Q0WVW7_ARATH
Length = 911
Score = 81.6 bits (200), Expect = 3e-14
Identities = 56/155 (36%), Positives = 74/155 (47%), Gaps = 2/155 (1%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
+L EG + VLFVSPERLL+ F S R
Sbjct: 353 KLKEGIIKVLFVSPERLLNVEFLSMFRMS------------------------------- 381
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
+ VSLVV+DEAHC+SEWSHNFRP+Y+ L S LF A +LA+TA
Sbjct: 382 ---LSVSLVVVDEAHCVSEWSHNFRPSYMRL-------KASMLF---SELKAECILAMTA 428
Query: 374 TASVATAAAITSALRTPT--VVASDVARTNLQLSI 472
TA+ T A+ S+L P+ ++ R N +LS+
Sbjct: 429 TATTMTLQAVMSSLEIPSTNLIQKSQLRDNFELSV 463
[13][TOP]
>UniRef100_B9HTB0 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HTB0_POPTR
Length = 901
Score = 81.6 bits (200), Expect = 3e-14
Identities = 56/154 (36%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
Frame = +2
Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196
L EG + VLFVSPER L+ F S +
Sbjct: 337 LQEGGIKVLFVSPERFLNAEFLSILSP--------------------------------- 363
Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376
+P+SL+V+DEAHCISEWSHNFRP+Y+ L +L +RL + +LA+TAT
Sbjct: 364 --IPISLLVVDEAHCISEWSHNFRPSYMRLRASL---LCTRL-------NIGCILAMTAT 411
Query: 377 ASVATAAAITSALRTPT--VVASDVARTNLQLSI 472
A+ T AI SAL P+ ++ + R N+QLS+
Sbjct: 412 ATTTTLNAIMSALEIPSTNLIQNAKLRDNMQLSV 445
[14][TOP]
>UniRef100_A9THL2 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9THL2_PHYPA
Length = 727
Score = 80.1 bits (196), Expect = 9e-14
Identities = 56/161 (34%), Positives = 77/161 (47%), Gaps = 2/161 (1%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
I +++ G + VLF+SPERL SE F + M +
Sbjct: 185 IMSKVISGHIKVLFISPERLFSETFLTAMDSLP--------------------------- 217
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
+SL V+DEAHC+SEWSHNFRP+Y L L RL P +LA
Sbjct: 218 -------EISLAVVDEAHCLSEWSHNFRPSYYRLGKILK----QRL-------SVPCLLA 259
Query: 365 LTATASVATAAAITSALRTPT--VVASDVARTNLQLSIVRA 481
LTATA+ T +IT AL P+ ++ + R NL+LS+ R+
Sbjct: 260 LTATATKDTECSITKALSIPSSGILEASCVRHNLRLSVSRS 300
[15][TOP]
>UniRef100_A4RY08 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4RY08_OSTLU
Length = 685
Score = 79.3 bits (194), Expect = 1e-13
Identities = 59/161 (36%), Positives = 76/161 (47%), Gaps = 2/161 (1%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
RL G + VLFVSPERLL+E F + ++ + PGG
Sbjct: 113 RLRAGELKVLFVSPERLLNEHFVNDLQ---------------------------NVPGG- 144
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
VSL +DEAHC+SEWSHNFRPAY L L+ A LALTA
Sbjct: 145 -----VSLACIDEAHCVSEWSHNFRPAYHRLGRILN-----------DRVQAQTTLALTA 188
Query: 374 TASVATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTV 490
TA+ T ++ L P+ V+ + R NL LS++R P V
Sbjct: 189 TATKKTEVSLIKQLGIPSEGVMRNVRVRDNLILSVMRVPDV 229
[16][TOP]
>UniRef100_Q018J1 ATP-dependent DNA helicase (ISS) (Fragment) n=1 Tax=Ostreococcus
tauri RepID=Q018J1_OSTTA
Length = 973
Score = 78.6 bits (192), Expect = 2e-13
Identities = 58/159 (36%), Positives = 74/159 (46%), Gaps = 2/159 (1%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
RL G + VLFVSPERLL++ F + ++ D PGG
Sbjct: 518 RLRAGKIKVLFVSPERLLNDNFINDLQ---------------------------DVPGG- 549
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
VSL +DEAHC+SEWSHNFRPAY L L+ A LALTA
Sbjct: 550 -----VSLACVDEAHCVSEWSHNFRPAYHRLGRILN-----------DRVRAKTTLALTA 593
Query: 374 TASVATAAAITSALRTPT--VVASDVARTNLQLSIVRAP 484
TA+ T ++ L P V+ + R NL LS++R P
Sbjct: 594 TATKKTELSLIRQLNIPNEGVLRNVRVRDNLILSVMRVP 632
[17][TOP]
>UniRef100_Q03GM2 ATP-dependent DNA helicase RecQ n=1 Tax=Pediococcus pentosaceus
ATCC 25745 RepID=Q03GM2_PEDPA
Length = 584
Score = 78.2 bits (191), Expect = 3e-13
Identities = 53/166 (31%), Positives = 72/166 (43%)
Frame = +2
Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202
+GAV +L++SPERL SE F R
Sbjct: 103 QGAVKLLYISPERLDSEYF------------------------------------DRLAE 126
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
+P+ L+ +DEAHCIS+W H+FRP+YL L D +H P P ++ALTATA+
Sbjct: 127 LPIDLIAIDEAHCISQWGHDFRPSYLKLTDIIH-----------HLPTRPTIIALTATAT 175
Query: 383 VATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I L V + AR NL +V+ D L L+L
Sbjct: 176 PRVAEDIKQRLAIQQEVQTGFARPNLSFKVVKDQDSDRFLIDYLKL 221
[18][TOP]
>UniRef100_A9ALZ9 ATP-dependent DNA helicase n=1 Tax=Burkholderia multivorans ATCC
17616 RepID=A9ALZ9_BURM1
Length = 607
Score = 76.3 bits (186), Expect = 1e-12
Identities = 55/155 (35%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
Frame = +2
Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196
L +G ++FV+PERL F + AGG
Sbjct: 108 LRDGRTRIVFVTPERLAQPAFVDVL-------------------------AGGT------ 136
Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376
RVPV LVV+DEAHC+S+W H+FRPA+L +A A+ G P VLALTAT
Sbjct: 137 -RVPVELVVVDEAHCVSKWGHDFRPAFLDIAHAVDTIGG------------PPVLALTAT 183
Query: 377 ASVATAAAITSA--LRTPTVVASDVARTNLQLSIV 475
A+ I A LR PT+V + R NL +V
Sbjct: 184 ATPEVVDDIVHALRLRKPTIVRTGTYRPNLHYRVV 218
[19][TOP]
>UniRef100_B9BJJ7 ATP-dependent DNA helicase RecQ n=2 Tax=Burkholderia multivorans
RepID=B9BJJ7_9BURK
Length = 609
Score = 76.3 bits (186), Expect = 1e-12
Identities = 55/155 (35%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
Frame = +2
Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196
L +G ++FV+PERL F + AGG
Sbjct: 110 LRDGRTRIVFVTPERLAQPAFVDVL-------------------------AGGT------ 138
Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376
RVPV LVV+DEAHC+S+W H+FRPA+L +A A+ G P VLALTAT
Sbjct: 139 -RVPVELVVVDEAHCVSKWGHDFRPAFLDIAHAVDTIGG------------PPVLALTAT 185
Query: 377 ASVATAAAITSA--LRTPTVVASDVARTNLQLSIV 475
A+ I A LR PT+V + R NL +V
Sbjct: 186 ATPEVVDDIVHALRLRDPTIVRTGTYRPNLHYRVV 220
[20][TOP]
>UniRef100_B9B7X0 ATP-dependent DNA helicase RecQ n=1 Tax=Burkholderia multivorans
CGD1 RepID=B9B7X0_9BURK
Length = 607
Score = 76.3 bits (186), Expect = 1e-12
Identities = 55/155 (35%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
Frame = +2
Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196
L +G ++FV+PERL F + AGG
Sbjct: 108 LRDGRTRIVFVTPERLAQPAFVDVL-------------------------AGGT------ 136
Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376
RVPV LVV+DEAHC+S+W H+FRPA+L +A A+ G P VLALTAT
Sbjct: 137 -RVPVELVVVDEAHCVSKWGHDFRPAFLDIAHAVDTIGG------------PPVLALTAT 183
Query: 377 ASVATAAAITSA--LRTPTVVASDVARTNLQLSIV 475
A+ I A LR PT+V + R NL +V
Sbjct: 184 ATPEVVDDIVHALRLRDPTIVRTGTYRPNLHYRVV 218
[21][TOP]
>UniRef100_C0WRJ3 ATP-dependent DNA helicase RecQ n=1 Tax=Lactobacillus buchneri ATCC
11577 RepID=C0WRJ3_LACBU
Length = 587
Score = 74.7 bits (182), Expect = 4e-12
Identities = 54/166 (32%), Positives = 71/166 (42%)
Frame = +2
Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202
EGAV +L+VSPERL S F+
Sbjct: 103 EGAVKLLYVSPERLDSGAFSQLAN------------------------------------ 126
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
+P+ LV +DEAHCIS+W H+FRP+YL L D LH P P ++ALTATA+
Sbjct: 127 LPIDLVAVDEAHCISQWGHDFRPSYLALTDRLH-----------ELPTRPTIVALTATAT 175
Query: 383 VATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I + L V + R NL +V+ D L L+L
Sbjct: 176 PRVAEDIKARLDLVDEVKTGFERDNLSFKVVKDQDSDRYLLDYLKL 221
[22][TOP]
>UniRef100_C2D2U3 ATP-dependent DNA helicase RecQ n=1 Tax=Lactobacillus brevis subsp.
gravesensis ATCC 27305 RepID=C2D2U3_LACBR
Length = 587
Score = 74.3 bits (181), Expect = 5e-12
Identities = 54/166 (32%), Positives = 71/166 (42%)
Frame = +2
Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202
EGAV +L+VSPERL S F+
Sbjct: 103 EGAVKLLYVSPERLDSGAFSQLAS------------------------------------ 126
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
+P+ LV +DEAHCIS+W H+FRP+YL L D LH P P ++ALTATA+
Sbjct: 127 LPIDLVAVDEAHCISQWGHDFRPSYLALTDRLH-----------ELPTRPTIVALTATAT 175
Query: 383 VATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I + L V + R NL +V+ D L L+L
Sbjct: 176 PRVAEDIKARLDLVDEVKTGFERDNLSFKVVKDQDSDRYLLDYLKL 221
[23][TOP]
>UniRef100_A1A0P0 ATP-dependent DNA helicase RecQ n=1 Tax=Bifidobacterium
adolescentis ATCC 15703 RepID=A1A0P0_BIFAA
Length = 674
Score = 73.9 bits (180), Expect = 6e-12
Identities = 49/160 (30%), Positives = 70/160 (43%), Gaps = 2/160 (1%)
Frame = +2
Query: 20 LEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAP 199
L G + +L+V+PERL +ERF +F A
Sbjct: 137 LSGQIKLLYVAPERLETERFRNF-----------------------------------AV 161
Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379
RVP+SLV +DEAHC+S+W +FR +YL + + + G P P V A TATA
Sbjct: 162 RVPISLVAVDEAHCVSQWGQDFRSSYLGIGEFI-----------AGLPTRPTVAAFTATA 210
Query: 380 SVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVD 493
+ I S L TP++ + R NL ++ P D
Sbjct: 211 TERVRRDIVSILGLHTPSITVTGFDRPNLYFDVISMPRKD 250
[24][TOP]
>UniRef100_C8ZZN5 ATP-dependent DNA helicase RecQ n=1 Tax=Enterococcus gallinarum EG2
RepID=C8ZZN5_ENTGA
Length = 588
Score = 73.9 bits (180), Expect = 6e-12
Identities = 50/154 (32%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
Frame = +2
Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202
+G + +L+V+PERL S+ F +R
Sbjct: 104 KGEIKLLYVAPERLESDHFRELLRY----------------------------------- 128
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
VP+SL+ +DEAHCIS+W H+FRP+YL LA+ +H F R P V+ALTATA+
Sbjct: 129 VPISLLAVDEAHCISQWGHDFRPSYLRLAETIHS------FDQR-----PTVVALTATAT 177
Query: 383 VATAAAITSALRTP--TVVASDVARTNLQLSIVR 478
A I L P V + AR NL +++
Sbjct: 178 PKVAQDIERLLLIPPENQVKTGFARENLSFEVIK 211
[25][TOP]
>UniRef100_A7A4M3 Putative uncharacterized protein n=1 Tax=Bifidobacterium
adolescentis L2-32 RepID=A7A4M3_BIFAD
Length = 674
Score = 73.9 bits (180), Expect = 6e-12
Identities = 49/160 (30%), Positives = 70/160 (43%), Gaps = 2/160 (1%)
Frame = +2
Query: 20 LEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAP 199
L G + +L+V+PERL +ERF +F A
Sbjct: 137 LSGQIKLLYVAPERLETERFRNF-----------------------------------AV 161
Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379
RVP+SLV +DEAHC+S+W +FR +YL + + + G P P V A TATA
Sbjct: 162 RVPISLVAVDEAHCVSQWGQDFRSSYLGIGEFI-----------AGLPTRPTVAAFTATA 210
Query: 380 SVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVD 493
+ I S L TP++ + R NL ++ P D
Sbjct: 211 TERVRRDIVSILGLHTPSITVTGFDRPNLYFDVISMPRKD 250
[26][TOP]
>UniRef100_UPI0000E81D64 PREDICTED: similar to RecQ4 protein, partial n=1 Tax=Gallus gallus
RepID=UPI0000E81D64
Length = 479
Score = 73.6 bits (179), Expect = 8e-12
Identities = 59/172 (34%), Positives = 71/172 (41%), Gaps = 4/172 (2%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
R+ EG+ VL +SPE L+ AH +
Sbjct: 222 RVQEGSAQVLLLSPEALVGTGSCCLPPAHQLP---------------------------- 253
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
PV+ +DEAHCISEWSHNFRP+YL L L G R F LALTA
Sbjct: 254 ----PVAFACIDEAHCISEWSHNFRPSYLRLCKVLRDRLGIRCF-----------LALTA 298
Query: 374 TASVATAAAITSALRTP----TVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517
TA+VATA + + L P V NLQLS+ D L LLR
Sbjct: 299 TATVATARDVAAHLGIPQQDGIAVQCAAVPPNLQLSVSVEWDRDRALVNLLR 350
[27][TOP]
>UniRef100_C7JHF1 DNA helicase RecQ n=8 Tax=Acetobacter pasteurianus
RepID=C7JHF1_ACEP3
Length = 626
Score = 73.6 bits (179), Expect = 8e-12
Identities = 53/159 (33%), Positives = 68/159 (42%), Gaps = 2/159 (1%)
Frame = +2
Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181
+I L G +D+L++SPERLLS G
Sbjct: 121 KIRSDLANGRIDLLYISPERLLSS-----------------------------------G 145
Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361
R R+P+S++ +DEAHCIS W H FRP Y L PR PH P +
Sbjct: 146 TLDRLVRIPLSVIAIDEAHCISAWGHEFRPEYRALTAL-----------PRHFPHVPRI- 193
Query: 362 ALTATASVATAAAITSALRTP--TVVASDVARTNLQLSI 472
ALTATA T I +AL P V+ S R NL +S+
Sbjct: 194 ALTATADERTREDILAALDMPHAEVLVSSFHRPNLNISV 232
[28][TOP]
>UniRef100_B6GD73 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM
13279 RepID=B6GD73_9ACTN
Length = 662
Score = 73.2 bits (178), Expect = 1e-11
Identities = 49/152 (32%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Frame = +2
Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202
EG +++V+PERL RF +F +A A GG G
Sbjct: 105 EGWYQIMYVAPERLADPRFLAFAQAAAAPGGIG--------------------------- 137
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
V LV +DEAHC+S+W +FRP+YL +AD + P P V A TATA+
Sbjct: 138 --VPLVAVDEAHCVSQWGQDFRPSYLQIADFID-----------ALPQRPVVAAFTATAT 184
Query: 383 VATAAAITSA--LRTPTVVASDVARTNLQLSI 472
A I LR+P V + R NL ++
Sbjct: 185 DRVRADIAGMLHLRSPETVVTGFDRANLSFNV 216
[29][TOP]
>UniRef100_A2WE26 Superfamily II DNA helicase n=1 Tax=Burkholderia dolosa AUO158
RepID=A2WE26_9BURK
Length = 654
Score = 73.2 bits (178), Expect = 1e-11
Identities = 52/155 (33%), Positives = 70/155 (45%), Gaps = 2/155 (1%)
Frame = +2
Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196
L EG ++FV+PERL F + GR
Sbjct: 159 LREGRTRIVFVTPERLAQPAFVDVL-------------------------------AGRM 187
Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376
++PV LVV+DEAHC+S+W H+FRPA+L +A A+ G P VLALTAT
Sbjct: 188 -QLPVELVVVDEAHCVSKWGHDFRPAFLDIAHAVETIGG------------PPVLALTAT 234
Query: 377 ASVATAAAITSA--LRTPTVVASDVARTNLQLSIV 475
A+ I A LR PT+V + R NL ++
Sbjct: 235 ATPEVVEDIVHALRLREPTIVRTGTYRPNLHYRVI 269
[30][TOP]
>UniRef100_C5C8V2 ATP-dependent DNA helicase RecQ n=1 Tax=Micrococcus luteus NCTC
2665 RepID=C5C8V2_MICLC
Length = 734
Score = 72.8 bits (177), Expect = 1e-11
Identities = 55/175 (31%), Positives = 76/175 (43%), Gaps = 5/175 (2%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
+ RL VDVL +SPERL + RF + G
Sbjct: 132 VRARLAADEVDVLLISPERLTNPRFRDEQLPDLVARMG---------------------- 169
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
L+V+DEAHCIS+W H+FRP Y + D + L P G P A VLA
Sbjct: 170 ----------LLVVDEAHCISDWGHDFRPDYRRIRDLI------GLLPAEG-PRAVPVLA 212
Query: 365 LTATASVATAAAITSALRTPT-----VVASDVARTNLQLSIVRAPTVDAKLPLLL 514
TATA+ A + L + V+ +AR +L+L ++R P+ A+L LL
Sbjct: 213 TTATANARVVADVVEQLGVASEQDVFVLRGPLARASLRLGVLRMPSPAARLAWLL 267
[31][TOP]
>UniRef100_A1T017 ATP-dependent DNA helicase RecQ n=1 Tax=Psychromonas ingrahamii 37
RepID=A1T017_PSYIN
Length = 636
Score = 72.4 bits (176), Expect = 2e-11
Identities = 57/165 (34%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G V +LF+S ERL SERF F++ ++
Sbjct: 102 GQVKILFISVERLNSERFRLFLK-----------------------------------KI 126
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P+SL+V+DEAHCISEW HNFRP YL LA L+ R + P VL LTATA+
Sbjct: 127 PISLLVVDEAHCISEWGHNFRPDYLKLA----------LY--RREFNIPQVLLLTATATQ 174
Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLL 514
A + + A+ + + R NL LS++ + D KL LL
Sbjct: 175 KVIADMGNKFAIDADNITLTGSYRANLNLSVLGVGSFD-KLNTLL 218
[32][TOP]
>UniRef100_C0BPW3 Putative uncharacterized protein n=1 Tax=Bifidobacterium
pseudocatenulatum DSM 20438 RepID=C0BPW3_9BIFI
Length = 641
Score = 72.4 bits (176), Expect = 2e-11
Identities = 49/155 (31%), Positives = 68/155 (43%), Gaps = 2/155 (1%)
Frame = +2
Query: 20 LEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAP 199
L G + +L+V+PERL +ERF +F A
Sbjct: 106 LSGRIRLLYVAPERLETERFRTF-----------------------------------AS 130
Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379
RVP+SLV +DEAHC+S+W +FR +YL + D L + P P V A TATA
Sbjct: 131 RVPISLVAVDEAHCVSQWGQDFRSSYLGIGDFL-----------KALPTRPTVAAFTATA 179
Query: 380 SVATAAAITS--ALRTPTVVASDVARTNLQLSIVR 478
+ I LR P+V + R NL ++R
Sbjct: 180 TERVRRDIIGILGLRDPSVTVTGFDRANLYFDVIR 214
[33][TOP]
>UniRef100_B6XX87 Putative uncharacterized protein n=1 Tax=Bifidobacterium
catenulatum DSM 16992 RepID=B6XX87_9BIFI
Length = 657
Score = 72.4 bits (176), Expect = 2e-11
Identities = 49/155 (31%), Positives = 68/155 (43%), Gaps = 2/155 (1%)
Frame = +2
Query: 20 LEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAP 199
L G + +L+V+PERL +ERF +F A
Sbjct: 122 LSGRIRLLYVAPERLETERFRTF-----------------------------------AS 146
Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379
RVP+SLV +DEAHC+S+W +FR +YL + D L + P P V A TATA
Sbjct: 147 RVPISLVAVDEAHCVSQWGQDFRSSYLGIGDFL-----------KALPTRPTVAAFTATA 195
Query: 380 SVATAAAITS--ALRTPTVVASDVARTNLQLSIVR 478
+ I LR P+V + R NL ++R
Sbjct: 196 TERVRRDIIGILGLRDPSVTVTGFDRANLYFDVIR 230
[34][TOP]
>UniRef100_B2TB59 ATP-dependent DNA helicase, RecQ family n=1 Tax=Burkholderia
phytofirmans PsJN RepID=B2TB59_BURPP
Length = 588
Score = 72.0 bits (175), Expect = 2e-11
Identities = 50/164 (30%), Positives = 71/164 (43%), Gaps = 2/164 (1%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
R+ G ++FV+PERL F +R+HA
Sbjct: 107 RIAGGEGGIVFVTPERLTQPAFIDILRSHADRR--------------------------- 139
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
+ LVV+DEAHC+S W H+FRPA+L +A A+ + P VLALTA
Sbjct: 140 -----IGLVVVDEAHCVSHWGHDFRPAFLEIASAVK------------AIGRPPVLALTA 182
Query: 374 TASVATAAAITSA--LRTPTVVASDVARTNLQLSIVRAPTVDAK 499
TA+ I + LR P +V + R NL+ +V+ T K
Sbjct: 183 TATAEVLEDIVRSLGLREPRIVRTGTLRQNLRYRVVQVSTAGGK 226
[35][TOP]
>UniRef100_C2M9T4 ATP-dependent DNA helicase RecQ n=1 Tax=Porphyromonas uenonis 60-3
RepID=C2M9T4_9PORP
Length = 714
Score = 72.0 bits (175), Expect = 2e-11
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Frame = +2
Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376
P +P+ L+V+DE HCIS+W ++FRP+YL +A+ R +P A +LALTAT
Sbjct: 207 PELPIRLIVVDECHCISQWGYDFRPSYLKIAEI------RRYYP------AVPLLALTAT 254
Query: 377 ASVATAAAITSAL--RTPTVVASDVARTNLQLSIVRAPTVDAKLPLL 511
A+ A + + L R P V++S AR NLQ IVR PT+D LL
Sbjct: 255 ATPEVVADVMARLSFRKPHVISSSFARDNLQY-IVR-PTMDKATELL 299
[36][TOP]
>UniRef100_A3Y6N2 Putative helicase (RecQ-like) n=1 Tax=Marinomonas sp. MED121
RepID=A3Y6N2_9GAMM
Length = 683
Score = 72.0 bits (175), Expect = 2e-11
Identities = 55/165 (33%), Positives = 73/165 (44%), Gaps = 2/165 (1%)
Frame = +2
Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202
EG + +L VS ER +E F +F+
Sbjct: 103 EGQIKILMVSVERFNNESFRNFLHT----------------------------------- 127
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
+ +SL+V+DEAHCISEW HNFRP YL L D R F + P VL LTATA+
Sbjct: 128 LSISLLVVDEAHCISEWGHNFRPDYLKLPDY------QRQF------NIPLVLLLTATAA 175
Query: 383 --VATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLL 511
V A A+ +V + R+NL L+++ P VD K LL
Sbjct: 176 PKVKRDMAAKFAIDEQHIVQTGFYRSNLNLTVLSVPQVDKKAALL 220
[37][TOP]
>UniRef100_C5EA42 ATP-dependent DNA helicase RecQ n=1 Tax=Bifidobacterium longum
subsp. infantis CCUG 52486 RepID=C5EA42_BIFLO
Length = 549
Score = 71.2 bits (173), Expect = 4e-11
Identities = 49/161 (30%), Positives = 71/161 (44%), Gaps = 2/161 (1%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
+ GR L G + +L+V+PERL + FA F
Sbjct: 110 VYGRALSGELRILYVAPERLHAPDFADFSH------------------------------ 139
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
R+ +SL+ +DEAHC+ W +FRP+Y+ + + + PR P +A
Sbjct: 140 -----RIRISLLAVDEAHCVLHWGSDFRPSYMRIGEFIDS------LSPR-----PVTMA 183
Query: 365 LTATASVATAAAITSALR--TPTVVASDVARTNLQLSIVRA 481
LTATAS A I L P V +D R NL+L++VRA
Sbjct: 184 LTATASRTQAGEIRELLHLADPVTVTTDADRPNLRLTVVRA 224
[38][TOP]
>UniRef100_C2GU55 Putative uncharacterized protein n=1 Tax=Bifidobacterium longum
subsp. infantis ATCC 55813 RepID=C2GU55_BIFLO
Length = 542
Score = 71.2 bits (173), Expect = 4e-11
Identities = 49/161 (30%), Positives = 71/161 (44%), Gaps = 2/161 (1%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
+ GR L G + +L+V+PERL + FA F
Sbjct: 102 VYGRALSGELRILYVAPERLHAPDFADFSH------------------------------ 131
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
R+ +SL+ +DEAHC+ W +FRP+Y+ + + + PR P +A
Sbjct: 132 -----RIRISLLAVDEAHCVLHWGSDFRPSYMRIGEFIDS------LSPR-----PVTMA 175
Query: 365 LTATASVATAAAITSALR--TPTVVASDVARTNLQLSIVRA 481
LTATAS A I L P V +D R NL+L++VRA
Sbjct: 176 LTATASRTQAGEIRELLHLADPVTVTTDADRPNLRLTVVRA 216
[39][TOP]
>UniRef100_B1G0H5 ATP-dependent DNA helicase, RecQ family n=1 Tax=Burkholderia
graminis C4D1M RepID=B1G0H5_9BURK
Length = 577
Score = 70.9 bits (172), Expect = 5e-11
Identities = 53/164 (32%), Positives = 71/164 (43%), Gaps = 2/164 (1%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
R+ G ++FV+PERL F +RA
Sbjct: 98 RIAAGDSGIVFVTPERLAQPAFIETLRAR------------------------------- 126
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
P V LVV+DEAHC+S W H+FRPA+L +A A+ + P VLALTA
Sbjct: 127 -PENRVGLVVVDEAHCVSHWGHDFRPAFLEIAAAVK------------ALGQPPVLALTA 173
Query: 374 TAS--VATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAK 499
TA+ V + ALR P VV + R NL+ +V+ T K
Sbjct: 174 TATQRVIDDIVHSLALRDPLVVRTGTYRENLRYRVVQVSTAGGK 217
[40][TOP]
>UniRef100_A8VRE3 Aldose 1-epimerase n=1 Tax=Bacillus selenitireducens MLS10
RepID=A8VRE3_9BACI
Length = 591
Score = 70.9 bits (172), Expect = 5e-11
Identities = 43/105 (40%), Positives = 59/105 (56%), Gaps = 4/105 (3%)
Frame = +2
Query: 176 DGPGGRA--PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHA 349
+ PG A ++PVSL+ +DEAHC+S+W H+FRP+YL + + + RLF P
Sbjct: 119 ESPGFNAMFEQLPVSLIAVDEAHCLSQWGHDFRPSYLRIPELI-----GRLFEP------ 167
Query: 350 PAVLALTATASVATAAAITSALRTPTV--VASDVARTNLQLSIVR 478
P VLALTATA+ A I S L P V + AR NL + +
Sbjct: 168 PPVLALTATATPEVADGIVSILGIPASNRVQTGFARENLAFHVAK 212
[41][TOP]
>UniRef100_UPI000174595E superfamily II DNA and RNA helicases, RecQ-like protein n=1
Tax=Verrucomicrobium spinosum DSM 4136
RepID=UPI000174595E
Length = 648
Score = 70.1 bits (170), Expect = 9e-11
Identities = 56/176 (31%), Positives = 78/176 (44%), Gaps = 2/176 (1%)
Frame = +2
Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181
++ G + G + +L+++PERL+SE F
Sbjct: 98 QVLGDMRSGRLKLLYIAPERLMSESFME-------------------------------- 125
Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361
R RV +SL+ +DE+HCISEW HNFRP YL LA+ + +L P VL
Sbjct: 126 ---RLSRVKISLLAIDESHCISEWGHNFRPEYLRLAEV---ARKLQLHP---------VL 170
Query: 362 ALTATASVATAAAITSALRTPTV--VASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
ALTATA+ A I R + + R NL + I AP V +L LL + L
Sbjct: 171 ALTATATPGVAEDIRRTFRIAPEDHIQTTFLRRNLAIQITPAP-VKQRLALLTQKL 225
[42][TOP]
>UniRef100_Q88Y35 ATP-dependent DNA helicase RecQ n=1 Tax=Lactobacillus plantarum
RepID=Q88Y35_LACPL
Length = 602
Score = 70.1 bits (170), Expect = 9e-11
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Frame = +2
Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379
R+P+ L+ +DEAHCIS+W H+FRP+YL L+ A+ P P VLALTATA
Sbjct: 131 RLPIQLLAIDEAHCISQWGHDFRPSYLALSTAIEQLPTH-----------PQVLALTATA 179
Query: 380 SVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVD 493
+ AA I A+ V + AR NL L++V+ D
Sbjct: 180 TEQVAADICGRLAINPQHEVNTGFARDNLDLTVVKDQDTD 219
[43][TOP]
>UniRef100_A3PZK0 ATP-dependent DNA helicase, RecQ family n=1 Tax=Mycobacterium sp.
JLS RepID=A3PZK0_MYCSJ
Length = 543
Score = 70.1 bits (170), Expect = 9e-11
Identities = 44/105 (41%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Frame = +2
Query: 176 DGPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADAL----HGSPGSRLFPPRGSP 343
D GR VSL+V+DEAHC+S W H+FRP YL LADA +G+P
Sbjct: 128 DAVVGRLAEAAVSLIVVDEAHCVSAWGHDFRPDYLRLADAFAQFGNGAP----------- 176
Query: 344 HAPAVLALTATASVATAAAITS--ALRTPTVVASDVARTNLQLSI 472
V+ALTATASV I LR P +V + R NL L +
Sbjct: 177 ----VVALTATASVVVRREIVERLGLRDPLMVVGNFDRPNLTLEV 217
[44][TOP]
>UniRef100_A1UFZ0 ATP-dependent DNA helicase, RecQ family n=2 Tax=Mycobacterium
RepID=A1UFZ0_MYCSK
Length = 543
Score = 70.1 bits (170), Expect = 9e-11
Identities = 44/105 (41%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Frame = +2
Query: 176 DGPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADAL----HGSPGSRLFPPRGSP 343
D GR VSL+V+DEAHC+S W H+FRP YL LADA +G+P
Sbjct: 128 DAVVGRLAEAAVSLIVVDEAHCVSAWGHDFRPDYLRLADAFAQFGNGAP----------- 176
Query: 344 HAPAVLALTATASVATAAAITS--ALRTPTVVASDVARTNLQLSI 472
V+ALTATASV I LR P +V + R NL L +
Sbjct: 177 ----VVALTATASVVVRREIVERLGLRDPLMVVGNFDRPNLTLEV 217
[45][TOP]
>UniRef100_A0KL03 DNA helicase n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC
7966 RepID=A0KL03_AERHH
Length = 642
Score = 70.1 bits (170), Expect = 9e-11
Identities = 50/163 (30%), Positives = 73/163 (44%), Gaps = 2/163 (1%)
Frame = +2
Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181
R+ + +G + +L +S ERL +ERF F++
Sbjct: 95 RVMQQASDGQLKILMISVERLKNERFRRFIQ----------------------------- 125
Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361
+VP+S++V+DEAHCISEW HNFRP YL L D R P VL
Sbjct: 126 ------QVPLSMLVVDEAHCISEWGHNFRPDYLKLPDY------------RRELQIPQVL 167
Query: 362 ALTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAP 484
LTATA+ A A + + + ++ + R NL L++V P
Sbjct: 168 LLTATATPAVMADMQAKFEIEDEGLIVTGFYRANLDLAVVPLP 210
[46][TOP]
>UniRef100_UPI000176083D PREDICTED: similar to RecQ protein-like 4 n=1 Tax=Danio rerio
RepID=UPI000176083D
Length = 1389
Score = 69.7 bits (169), Expect = 1e-10
Identities = 58/168 (34%), Positives = 70/168 (41%), Gaps = 4/168 (2%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G V VL +SPE L+ GGG G G P + P
Sbjct: 753 GQVHVLLLSPEALV---------------GGGHSGSGCLP------------PADQLP-- 783
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
PV+ +DEAHC+SEWSHNFRP YL L L G R +L LTATA++
Sbjct: 784 PVAFACIDEAHCVSEWSHNFRPCYLRLCKVLRDRLGVR-----------CLLGLTATATL 832
Query: 386 ATAAAITSAL----RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517
+TA I L V S NLQLS+ D L LL+
Sbjct: 833 STALDIARHLDISDEDGIAVRSAAVPHNLQLSVSMDRDKDQALVSLLK 880
[47][TOP]
>UniRef100_UPI00005A2A13 PREDICTED: similar to ATP-dependent DNA helicase Q4 (RecQ
protein-like 4) (RecQ4) n=1 Tax=Canis lupus familiaris
RepID=UPI00005A2A13
Length = 1209
Score = 69.7 bits (169), Expect = 1e-10
Identities = 49/126 (38%), Positives = 58/126 (46%), Gaps = 8/126 (6%)
Frame = +2
Query: 164 GAGGDGPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSP 343
GAG PG PV+ +DEAHCIS+WSHNFRP YL + L G R F
Sbjct: 584 GAGAGMPGHLPQLPPVAFACIDEAHCISQWSHNFRPCYLRVCKVLREHMGVRCF------ 637
Query: 344 HAPAVLALTATASVATAAAITS--------ALRTPTVVASDVARTNLQLSIVRAPTVDAK 499
L LTATA+ +TA + LR P V S NL LS+ R D
Sbjct: 638 -----LGLTATATRSTARDVARHLGVAEELVLRGPATVPS-----NLHLSVSRDRDPDQA 687
Query: 500 LPLLLR 517
L LL+
Sbjct: 688 LVTLLQ 693
[48][TOP]
>UniRef100_UPI0000EB247A ATP-dependent DNA helicase Q4 (EC 3.6.1.-) (RecQ protein-like 4)
(RecQ4) (RTS). n=1 Tax=Canis lupus familiaris
RepID=UPI0000EB247A
Length = 1163
Score = 69.7 bits (169), Expect = 1e-10
Identities = 49/126 (38%), Positives = 58/126 (46%), Gaps = 8/126 (6%)
Frame = +2
Query: 164 GAGGDGPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSP 343
GAG PG PV+ +DEAHCIS+WSHNFRP YL + L G R F
Sbjct: 599 GAGAGMPGHLPQLPPVAFACIDEAHCISQWSHNFRPCYLRVCKVLREHMGVRCF------ 652
Query: 344 HAPAVLALTATASVATAAAITS--------ALRTPTVVASDVARTNLQLSIVRAPTVDAK 499
L LTATA+ +TA + LR P V S NL LS+ R D
Sbjct: 653 -----LGLTATATRSTARDVARHLGVAEELVLRGPATVPS-----NLHLSVSRDRDPDQA 702
Query: 500 LPLLLR 517
L LL+
Sbjct: 703 LVTLLQ 708
[49][TOP]
>UniRef100_B2JRY6 ATP-dependent DNA helicase, RecQ family n=1 Tax=Burkholderia
phymatum STM815 RepID=B2JRY6_BURP8
Length = 590
Score = 69.7 bits (169), Expect = 1e-10
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Frame = +2
Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388
VSLVV+DEAHC+S+W H+FRPA+L + DA+ S P +LALTATA+ A
Sbjct: 155 VSLVVVDEAHCVSQWGHDFRPAFLQIGDAVE------------SLGRPPILALTATATEA 202
Query: 389 TAAAI--TSALRTPTVVASDVARTNLQLSI 472
I T +R P V+ + V R NL S+
Sbjct: 203 VVDDIVRTLGMREPRVLQTGVYRPNLHYSV 232
[50][TOP]
>UniRef100_UPI0001B43382 hypothetical protein LmonF_08890 n=1 Tax=Listeria monocytogenes FSL
F2-515 RepID=UPI0001B43382
Length = 254
Score = 69.3 bits (168), Expect = 2e-10
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Frame = +2
Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379
+VP+SL +DEAHCIS+W H+FRP+YL L D+L P V+ALTATA
Sbjct: 129 QVPISLFAIDEAHCISQWGHDFRPSYLTLCDSLD-----------KMTRRPLVIALTATA 177
Query: 380 SVATAAAITSAL--RTPTVVASDVARTNLQLSIVRAPTVDAKL 502
+ A + I L R +VV + +R NL +V+ D L
Sbjct: 178 TQAVSDDICRLLKIRADSVVKTGFSRDNLAFQVVKGQDKDKYL 220
[51][TOP]
>UniRef100_UPI0000F3FF8E hypothetical protein Lmon1_05584 n=1 Tax=Listeria monocytogenes
10403S RepID=UPI0000F3FF8E
Length = 590
Score = 69.3 bits (168), Expect = 2e-10
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Frame = +2
Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379
+VP+SL +DEAHCIS+W H+FRP+YL L D+L P V+ALTATA
Sbjct: 129 QVPISLFAIDEAHCISQWGHDFRPSYLTLCDSLD-----------KMTRRPLVIALTATA 177
Query: 380 SVATAAAITSAL--RTPTVVASDVARTNLQLSIVRAPTVDAKL 502
+ A + I L R +VV + +R NL +V+ D L
Sbjct: 178 TQAVSDDICRLLKIRADSVVKTGFSRDNLAFQVVKGQDKDKYL 220
[52][TOP]
>UniRef100_Q2Y6M6 ATP-dependent DNA helicase, RecQ family n=1 Tax=Nitrosospira
multiformis ATCC 25196 RepID=Q2Y6M6_NITMU
Length = 602
Score = 69.3 bits (168), Expect = 2e-10
Identities = 42/109 (38%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Frame = +2
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
+P++L V+DEAHCIS+W H+FRPAYL L DA+ + P VLALTATA+
Sbjct: 167 IPINLFVIDEAHCISQWGHDFRPAYLGLGDAIK------------ALGKPTVLALTATAT 214
Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
I L + VV + + R NL S+++ + KL L L+
Sbjct: 215 PEVIEDIAQQLGRSSMHVVNTGIYRPNLNYSVLQVTNPEEKLEKLQDLI 263
[53][TOP]
>UniRef100_C9B1M5 ATP-dependent DNA helicase RecQ n=2 Tax=Enterococcus casseliflavus
RepID=C9B1M5_ENTCA
Length = 588
Score = 69.3 bits (168), Expect = 2e-10
Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 2/154 (1%)
Frame = +2
Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202
+G + +L+VSPERL SE F +R +
Sbjct: 104 QGRIKLLYVSPERLDSESFRYSLR-----------------------------------Q 128
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
+P++L+ +DEAHCIS+W H+FRP+YL LA+ + P ++ALTATA+
Sbjct: 129 MPIALLAVDEAHCISQWGHDFRPSYLRLAETID-----------NWEQKPTIVALTATAT 177
Query: 383 VATAAAITSALRTP--TVVASDVARTNLQLSIVR 478
A I + L P V + AR NL +V+
Sbjct: 178 PKVAEDIENLLSIPAENQVKTGFARENLAFQVVK 211
[54][TOP]
>UniRef100_C9A4Z6 ATP-dependent DNA helicase RecQ n=1 Tax=Enterococcus casseliflavus
EC20 RepID=C9A4Z6_ENTCA
Length = 588
Score = 69.3 bits (168), Expect = 2e-10
Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 2/154 (1%)
Frame = +2
Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202
+G + +L+VSPERL SE F +R +
Sbjct: 104 QGRIKLLYVSPERLDSEAFRYSLR-----------------------------------Q 128
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
+P++L+ +DEAHCIS+W H+FRP+YL LA+ + P ++ALTATA+
Sbjct: 129 MPIALLAVDEAHCISQWGHDFRPSYLRLAETID-----------NWEQKPTIVALTATAT 177
Query: 383 VATAAAITSALRTP--TVVASDVARTNLQLSIVR 478
A I + L P V + AR NL +V+
Sbjct: 178 PKVAEDIENLLSIPAENQVKTGFARENLAFQVVK 211
[55][TOP]
>UniRef100_C8KDR2 ATP-dependent DNA helicase RecQ n=2 Tax=Listeria monocytogenes
RepID=C8KDR2_LISMO
Length = 590
Score = 69.3 bits (168), Expect = 2e-10
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Frame = +2
Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379
+VP+SL +DEAHCIS+W H+FRP+YL L D+L P V+ALTATA
Sbjct: 129 QVPISLFAIDEAHCISQWGHDFRPSYLTLCDSLD-----------KMTRRPLVIALTATA 177
Query: 380 SVATAAAITSAL--RTPTVVASDVARTNLQLSIVRAPTVDAKL 502
+ A + I L R +VV + +R NL +V+ D L
Sbjct: 178 TQAVSDDICRLLKIRADSVVKTGFSRDNLAFQVVKGQDKDKYL 220
[56][TOP]
>UniRef100_C8JS99 ATP-dependent DNA helicase RecQ n=2 Tax=Listeria monocytogenes
RepID=C8JS99_LISMO
Length = 590
Score = 69.3 bits (168), Expect = 2e-10
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Frame = +2
Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379
+VP+SL +DEAHCIS+W H+FRP+YL L D+L P V+ALTATA
Sbjct: 129 QVPISLFAIDEAHCISQWGHDFRPSYLTLCDSLD-----------KMTRRPLVIALTATA 177
Query: 380 SVATAAAITSAL--RTPTVVASDVARTNLQLSIVRAPTVDAKL 502
+ A + I L R +VV + +R NL +V+ D L
Sbjct: 178 TQAVSDDICRLLKIRADSVVKTGFSRDNLAFQVVKGQDKDKYL 220
[57][TOP]
>UniRef100_C6VN17 ATP-dependent DNA helicase RecQ n=2 Tax=Lactobacillus plantarum
RepID=C6VN17_LACPJ
Length = 602
Score = 69.3 bits (168), Expect = 2e-10
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Frame = +2
Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379
R+P+ L+ +DEAHCIS+W H+FRP+YL L+ A+ P P VLALTATA
Sbjct: 131 RLPIQLLAIDEAHCISQWGHDFRPSYLALSTAIEQLPTH-----------PQVLALTATA 179
Query: 380 SVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVD 493
+ AA I A+ V + AR NL L++V+ D
Sbjct: 180 TEQVAADICGRLAIDPQHEVNTGFARDNLDLTVVKDQDTD 219
[58][TOP]
>UniRef100_Q7UHG1 ATP-dependent DNA helicase RecQ n=1 Tax=Rhodopirellula baltica
RepID=Q7UHG1_RHOBA
Length = 560
Score = 68.9 bits (167), Expect = 2e-10
Identities = 43/109 (39%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Frame = +2
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
V V L+V+DEAHC+S+W H+FRP YL L R P + ALTATAS
Sbjct: 204 VGVGLMVVDEAHCVSQWGHDFRPDYLCLPSI------------RERLGNPPLAALTATAS 251
Query: 383 VATAAAITSALR--TPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
T + +LR PT+V + + R NL++ +VR + + KL L R L
Sbjct: 252 ERTLDEVRCSLRLNDPTIVRTGIDRPNLRIEVVRCYSAEDKLKQLHRAL 300
[59][TOP]
>UniRef100_Q2IMJ3 LigA n=1 Tax=Anaeromyxobacter dehalogenans 2CP-C RepID=Q2IMJ3_ANADE
Length = 808
Score = 68.9 bits (167), Expect = 2e-10
Identities = 70/190 (36%), Positives = 73/190 (38%), Gaps = 20/190 (10%)
Frame = +1
Query: 10 GAAARGGGGRAVCVPRAAAE*AVCLVYARPRDDRRRRRSRRRHRRHRRR*RRGRRRRPGG 189
G AR GGR PRAAA ARPR RR R RR RRR RRR P
Sbjct: 75 GGLARPAGGRERATPRAAAGGVRRGRRARPR---RRARRRRHPAARRRRAPSARRRAPPA 131
Query: 190 PRPPGARVPRCAGRGPLHL*VVP*LPPRVPAPGRRAARLAWQP--------------PLP 327
P AR P G G P P RRA RLA + P P
Sbjct: 132 APAPAARRPARQGEGGQR--------HPTPRPRRRARRLAARSRAAEGHARGEARVLPRP 183
Query: 328 PPRVPSRAGGAGADRHRQ---RGHRGGHHVGAAHANSGGE---RRGADQPAAVHSPRAHR 489
PR R GAGA RHR+ RG R A A G RR A A P R
Sbjct: 184 APRA-RRVPGAGARRHRRDEGRGGRARRRARPARARPRGRARPRRRARGAAGRGRPGRRR 242
Query: 490 GRQAPAPPPA 519
+AP PPA
Sbjct: 243 AGRAPRGPPA 252
Score = 60.1 bits (144), Expect = 9e-08
Identities = 62/172 (36%), Positives = 66/172 (38%), Gaps = 4/172 (2%)
Frame = +1
Query: 10 GAAARGGGGRAVCVPRAAAE*AVCLVYARPRDDRRRRRSRRRHRRHRRR*RRGRRRRPGG 189
G A R GGGR PR R RRRR+RRR R RR G R GG
Sbjct: 403 GPARRRGGGRRA--PRRGGR-------GRGARPGRRRRARRRARADRRA---GGRAGRGG 450
Query: 190 --PRPPGARVPRCAGRGPLHL*VVP*LPPRVPAPGRRAARLAWQPPLPPPRVPSRAGGAG 363
R G P AGRGP RVP GRRA R +P PR +R G
Sbjct: 451 RDARGAGGGAPAGAGRGPRVRPEGRRRRARVPGQGRRAGRR--RPAHRRPRGRARRGARL 508
Query: 364 ADRHRQRGHRGGHHVGAAHANSGGERRGADQPAAVHSPRA--HRGRQAPAPP 513
H +R GG G A RR A A RA RGR PP
Sbjct: 509 GGGHARRAGAGGERAGRGRAEGRAGRRRARPARARGGDRAPGRRGRAGARPP 560
[60][TOP]
>UniRef100_C5D1T8 ATP-dependent DNA helicase, RecQ family n=1 Tax=Variovorax
paradoxus S110 RepID=C5D1T8_VARPS
Length = 590
Score = 68.9 bits (167), Expect = 2e-10
Identities = 54/174 (31%), Positives = 75/174 (43%), Gaps = 2/174 (1%)
Frame = +2
Query: 8 EGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPG 187
+ + +G+ V+F +PERL F + ++ H
Sbjct: 129 QAAIADGSARVIFSTPERLADADFLALLQRH----------------------------- 159
Query: 188 GRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLAL 367
P SL+V+DEAHCIS+W H+FRPAYL L A+ R H P VLAL
Sbjct: 160 ------PTSLLVVDEAHCISQWGHDFRPAYLELGAAV-----------RALNH-PVVLAL 201
Query: 368 TATASVATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
TATA+ A I L P +V + R NL ++ A + KL L L+
Sbjct: 202 TATANGEVAGEIMEKLGIPRAGLVDTGAYRPNLHYAVEPAMREEDKLRRALALV 255
[61][TOP]
>UniRef100_Q2BM74 RecQ domain protein n=1 Tax=Neptuniibacter caesariensis
RepID=Q2BM74_9GAMM
Length = 653
Score = 68.9 bits (167), Expect = 2e-10
Identities = 53/165 (32%), Positives = 72/165 (43%), Gaps = 2/165 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + +L +S ER +ERF F+R+ V
Sbjct: 104 GKIKILMISVERFKNERFREFIRS-----------------------------------V 128
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS- 382
PVS++V+DEAHCISEW HNFRP YL L R + P VL LTATA+
Sbjct: 129 PVSMLVVDEAHCISEWGHNFRPDYLKLPSY------------RNELNIPLVLLLTATATR 176
Query: 383 -VATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLL 514
V A A++ +VV + R+NL + ++ P D LL
Sbjct: 177 KVKRDMAERFAIKPESVVQTGFYRSNLDIRVL--PVADKNRDQLL 219
[62][TOP]
>UniRef100_B9TNI6 DNA helicase recq, putative (Fragment) n=1 Tax=Ricinus communis
RepID=B9TNI6_RICCO
Length = 266
Score = 68.9 bits (167), Expect = 2e-10
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 2/156 (1%)
Frame = +2
Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196
++EG +++F +PERL F ++A
Sbjct: 158 IVEGRCEIVFCTPERLTLPGFVDVLKA--------------------------------- 184
Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376
V ++LVV+DEAHCIS+W H+FRPAYL +A A+ + P VLALTAT
Sbjct: 185 --VKIALVVVDEAHCISQWGHDFRPAYLEMAGAIE------------ALGRPPVLALTAT 230
Query: 377 ASVATAAAITSALRTP--TVVASDVARTNLQLSIVR 478
A+ I L P V+ + + R NLQ ++V+
Sbjct: 231 ATEDVVDDIGRQLNRPRMNVINTGIYRPNLQYAVVQ 266
[63][TOP]
>UniRef100_C7YCE6 ATP-dependent DNA helicase RecQ n=1 Tax=Enterococcus faecalis T8
RepID=C7YCE6_ENTFA
Length = 596
Score = 68.6 bits (166), Expect = 3e-10
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +2
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+
Sbjct: 129 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 177
Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I LR P+ + + AR NL +V+ D L L++
Sbjct: 178 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 225
[64][TOP]
>UniRef100_C7WZZ4 ATP-dependent DNA helicase n=1 Tax=Enterococcus faecalis Merz96
RepID=C7WZZ4_ENTFA
Length = 589
Score = 68.6 bits (166), Expect = 3e-10
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +2
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+
Sbjct: 129 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 177
Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I LR P+ + + AR NL +V+ D L L++
Sbjct: 178 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 225
[65][TOP]
>UniRef100_C7WQV6 ATP-dependent DNA helicase n=1 Tax=Enterococcus faecalis AR01/DG
RepID=C7WQV6_ENTFA
Length = 589
Score = 68.6 bits (166), Expect = 3e-10
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +2
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+
Sbjct: 129 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 177
Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I LR P+ + + AR NL +V+ D L L++
Sbjct: 178 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 225
[66][TOP]
>UniRef100_C7W0X8 ATP-dependent DNA helicase n=1 Tax=Enterococcus faecalis E1Sol
RepID=C7W0X8_ENTFA
Length = 589
Score = 68.6 bits (166), Expect = 3e-10
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +2
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+
Sbjct: 129 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 177
Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I LR P+ + + AR NL +V+ D L L++
Sbjct: 178 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 225
[67][TOP]
>UniRef100_C7VTV3 ATP-dependent DNA helicase n=1 Tax=Enterococcus faecalis Fly1
RepID=C7VTV3_ENTFA
Length = 589
Score = 68.6 bits (166), Expect = 3e-10
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +2
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+
Sbjct: 129 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 177
Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I LR P+ + + AR NL +V+ D L L++
Sbjct: 178 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 225
[68][TOP]
>UniRef100_C7VJ37 ATP-dependent DNA helicase n=1 Tax=Enterococcus faecalis HIP11704
RepID=C7VJ37_ENTFA
Length = 589
Score = 68.6 bits (166), Expect = 3e-10
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +2
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+
Sbjct: 129 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 177
Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I LR P+ + + AR NL +V+ D L L++
Sbjct: 178 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 225
[69][TOP]
>UniRef100_C7UMW6 ATP-dependent DNA helicase recQ n=1 Tax=Enterococcus faecalis X98
RepID=C7UMW6_ENTFA
Length = 589
Score = 68.6 bits (166), Expect = 3e-10
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +2
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+
Sbjct: 129 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 177
Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I LR P+ + + AR NL +V+ D L L++
Sbjct: 178 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 225
[70][TOP]
>UniRef100_C7UBF3 ATP-dependent DNA helicase (Fragment) n=1 Tax=Enterococcus faecalis
ATCC 4200 RepID=C7UBF3_ENTFA
Length = 492
Score = 68.6 bits (166), Expect = 3e-10
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +2
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+
Sbjct: 32 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 80
Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I LR P+ + + AR NL +V+ D L L++
Sbjct: 81 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 128
[71][TOP]
>UniRef100_C7U7U1 ATP-dependent DNA helicase n=1 Tax=Enterococcus faecalis T3
RepID=C7U7U1_ENTFA
Length = 589
Score = 68.6 bits (166), Expect = 3e-10
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +2
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+
Sbjct: 129 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 177
Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I LR P+ + + AR NL +V+ D L L++
Sbjct: 178 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 225
[72][TOP]
>UniRef100_C7R3L1 ATP-dependent DNA helicase, RecQ family n=1 Tax=Jonesia
denitrificans DSM 20603 RepID=C7R3L1_JONDD
Length = 788
Score = 68.6 bits (166), Expect = 3e-10
Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 1/167 (0%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
I+ ++ G VD+L +SPERL + +F + G
Sbjct: 183 IQEQIASGGVDLLLISPERLNNPQFVHDVLPSLAQSAG---------------------- 220
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHG-SPGSRLFPPRGSPHAPAVL 361
LVV+DEAHC+S+W H+FRP Y + D L PG + + + +
Sbjct: 221 ----------LVVVDEAHCVSDWGHDFRPDYRRIRDVLASLPPGCPVLATTATANERVTV 270
Query: 362 ALTATASVATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKL 502
+ A + A+AA S + TV+ ++ RT+L L++V PT +L
Sbjct: 271 DVAAQLAEASAAPDGSDATSVTVIRGNLERTSLHLAVVTLPTAVDRL 317
[73][TOP]
>UniRef100_C7D1J0 ATP-dependent DNA helicase n=1 Tax=Enterococcus faecalis T2
RepID=C7D1J0_ENTFA
Length = 589
Score = 68.6 bits (166), Expect = 3e-10
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +2
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+
Sbjct: 129 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 177
Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I LR P+ + + AR NL +V+ D L L++
Sbjct: 178 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 225
[74][TOP]
>UniRef100_C2JP17 Possible ATP-dependent DNA helicase RecQ (Fragment) n=1
Tax=Enterococcus faecalis HH22 RepID=C2JP17_ENTFA
Length = 271
Score = 68.6 bits (166), Expect = 3e-10
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +2
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+
Sbjct: 62 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 110
Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I LR P+ + + AR NL +V+ D L L++
Sbjct: 111 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 158
[75][TOP]
>UniRef100_C2H342 ATP-dependent DNA helicase RecQ n=9 Tax=Enterococcus faecalis
RepID=C2H342_ENTFA
Length = 589
Score = 68.6 bits (166), Expect = 3e-10
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +2
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+
Sbjct: 129 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 177
Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I LR P+ + + AR NL +V+ D L L++
Sbjct: 178 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 225
[76][TOP]
>UniRef100_C2DAS7 ATP-dependent DNA helicase RecQ n=1 Tax=Enterococcus faecalis
TX1322 RepID=C2DAS7_ENTFA
Length = 589
Score = 68.6 bits (166), Expect = 3e-10
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +2
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+
Sbjct: 129 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 177
Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I LR P+ + + AR NL +V+ D L L++
Sbjct: 178 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 225
[77][TOP]
>UniRef100_C0X8H1 ATP-dependent DNA helicase RecQ n=1 Tax=Enterococcus faecalis
TX0104 RepID=C0X8H1_ENTFA
Length = 589
Score = 68.6 bits (166), Expect = 3e-10
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +2
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
VP+ L+ +DEAHCIS+W H+FRP+YL LA+ + P V+ALTATA+
Sbjct: 129 VPIDLLAVDEAHCISQWGHDFRPSYLRLAEIID-----------QFQQQPTVIALTATAT 177
Query: 383 VATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I LR P+ + + AR NL +V+ D L L++
Sbjct: 178 PQVAEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKM 225
[78][TOP]
>UniRef100_UPI0001B43671 ATP-dependent DNA helicase n=1 Tax=Listeria monocytogenes FSL
J1-175 RepID=UPI0001B43671
Length = 243
Score = 68.2 bits (165), Expect = 3e-10
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Frame = +2
Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379
+VP+SL +DEAHCIS+W H+FRP+YL L D+L P V+ALTATA
Sbjct: 129 QVPISLFAIDEAHCISQWGHDFRPSYLTLCDSLD-----------KMTRRPLVIALTATA 177
Query: 380 SVATAAAITSALR--TPTVVASDVARTNLQLSIVRAPTVDAKL 502
+ A + I L+ +VV + +R NL +V+ D L
Sbjct: 178 TQAVSDDICRLLKIGADSVVKTGFSRDNLAFQVVKGQDKDKYL 220
[79][TOP]
>UniRef100_UPI00016964BB ATP-dependent DNA helicase n=1 Tax=Listeria monocytogenes FSL
N1-017 RepID=UPI00016964BB
Length = 590
Score = 68.2 bits (165), Expect = 3e-10
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Frame = +2
Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379
+VP+SL +DEAHCIS+W H+FRP+YL L D+L P V+ALTATA
Sbjct: 129 QVPISLFAIDEAHCISQWGHDFRPSYLTLCDSLD-----------KMTRRPLVIALTATA 177
Query: 380 SVATAAAITSALR--TPTVVASDVARTNLQLSIVRAPTVDAKL 502
+ A + I L+ +VV + +R NL +V+ D L
Sbjct: 178 TQAVSDDICRLLKIGADSVVKTGFSRDNLAFQVVKGQDKDKYL 220
[80][TOP]
>UniRef100_Q03PQ4 ATP-dependent DNA helicase RecQ n=1 Tax=Lactobacillus brevis ATCC
367 RepID=Q03PQ4_LACBA
Length = 591
Score = 68.2 bits (165), Expect = 3e-10
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Frame = +2
Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379
R+P+ L+ +DEAHCIS+W H+FRP+YL L+ A+ P P VLALTATA
Sbjct: 130 RLPIDLLAVDEAHCISQWGHDFRPSYLTLSHAIEQLPSQ-----------PQVLALTATA 178
Query: 380 SVATAAAITSAL--RTPTVVASDVARTNLQLSIVRAPTVD 493
+ A I L V + AR NL L++V+ D
Sbjct: 179 TTQVAHDICQQLWIDPQNEVNTGFARDNLNLTVVKDQDTD 218
[81][TOP]
>UniRef100_B8DD57 ATP-dependent DNA helicase RecQ n=1 Tax=Listeria monocytogenes
HCC23 RepID=B8DD57_LISMH
Length = 590
Score = 68.2 bits (165), Expect = 3e-10
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Frame = +2
Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379
+VP+SL +DEAHCIS+W H+FRP+YL L D+L P V+ALTATA
Sbjct: 129 QVPISLFAIDEAHCISQWGHDFRPSYLTLCDSLD-----------KMTRRPLVIALTATA 177
Query: 380 SVATAAAITSALR--TPTVVASDVARTNLQLSIVRAPTVDAKL 502
+ A + I L+ +VV + +R NL +V+ D L
Sbjct: 178 TQAVSDDICRLLKIGVDSVVKTGFSRDNLAFQVVKGQDKDKYL 220
[82][TOP]
>UniRef100_Q1ZWZ5 Putative putative ATP-dependent DNA helicase RecQ n=1
Tax=Photobacterium angustum S14 RepID=Q1ZWZ5_PHOAS
Length = 638
Score = 68.2 bits (165), Expect = 3e-10
Identities = 56/169 (33%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
Frame = +2
Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202
+G + VL +S ERL +ERF F+ +
Sbjct: 102 QGEIKVLMISVERLKNERFRHFIS-----------------------------------Q 126
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
VP+SL+V+DEAHCISEW HNFRP YL L + S + P VL LTATA+
Sbjct: 127 VPISLLVVDEAHCISEWGHNFRPDYLKLPYY------------QQSLNIPQVLLLTATAT 174
Query: 383 VATAAAITSA--LRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
A + + +V + R NL LSI+ A D KL +L + L
Sbjct: 175 PAVINDMQDKFNIAKDDIVVTGFYRKNLDLSILAAQD-DEKLDVLQQQL 222
[83][TOP]
>UniRef100_Q71W06 ATP-dependent DNA helicase RecQ n=4 Tax=Listeria monocytogenes
RepID=Q71W06_LISMF
Length = 590
Score = 68.2 bits (165), Expect = 3e-10
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Frame = +2
Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379
+VP+SL +DEAHCIS+W H+FRP+YL L D+L P V+ALTATA
Sbjct: 129 QVPISLFAIDEAHCISQWGHDFRPSYLTLCDSLD-----------KMTRRPLVIALTATA 177
Query: 380 SVATAAAITSALR--TPTVVASDVARTNLQLSIVRAPTVDAKL 502
+ A + I L+ +VV + +R NL +V+ D L
Sbjct: 178 TQAVSDDICRLLKIGADSVVKTGFSRDNLAFQVVKGQDKDKYL 220
[84][TOP]
>UniRef100_C7MZP8 ATP-dependent DNA helicase RecQ n=1 Tax=Saccharomonospora viridis
DSM 43017 RepID=C7MZP8_SACVD
Length = 607
Score = 68.2 bits (165), Expect = 3e-10
Identities = 57/171 (33%), Positives = 75/171 (43%), Gaps = 2/171 (1%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
+E L G +D+L+++PERL SE +
Sbjct: 100 VEAEFLAGELDLLYLAPERLRSEATMRLIE------------------------------ 129
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
R PVS+ +DEAHC+++W H+FRP YL L S+L R P P V A
Sbjct: 130 -----RGPVSVFAIDEAHCVAQWGHDFRPDYLEL---------SKLSERR--PDVPRV-A 172
Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLL 511
LTATA+ AT A IT+ L V S R N+Q IV P D + LL
Sbjct: 173 LTATATPATRAEITTRLGLENARVFVSSFDRPNIQYRIV--PKKDPRRQLL 221
[85][TOP]
>UniRef100_C2GGN1 ATP-dependent DNA helicase n=1 Tax=Corynebacterium glucuronolyticum
ATCC 51866 RepID=C2GGN1_9CORY
Length = 694
Score = 68.2 bits (165), Expect = 3e-10
Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Frame = +2
Query: 8 EGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPG 187
E + G VDVL +SPERL++ F + + + G G
Sbjct: 110 EAAIRSGQVDVLLISPERLVNPDFREKILPYLIVGLG----------------------- 146
Query: 188 GRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLAL 367
+VV+DEAHCIS+W H+FRP Y + + L+ S L P G+P VLA
Sbjct: 147 ---------MVVVDEAHCISDWGHDFRPDYRRIQELLN----SDLDP--GTP----VLAT 187
Query: 368 TATASVATAAAITSALRTPT-VVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
TATA+ A + S L T V+ + RT+L LS+V A+ + +L
Sbjct: 188 TATANDRVVADVVSQLGPDTGVIRGGLDRTSLHLSVVHLDDPTARAAWIAGIL 240
[86][TOP]
>UniRef100_C1ZPJ3 ATP-dependent DNA helicase, RecQ family n=1 Tax=Rhodothermus
marinus DSM 4252 RepID=C1ZPJ3_RHOMR
Length = 505
Score = 68.2 bits (165), Expect = 3e-10
Identities = 52/166 (31%), Positives = 72/166 (43%), Gaps = 2/166 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
GA +L+V+PE+L + RF + RA R+
Sbjct: 34 GAYRLLYVTPEQLTTARFEA-----------------------------------RAGRL 58
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
V+L+ +DEAHC+SEW FRPAYLHL +A R P +LALTATA+
Sbjct: 59 RVALLAVDEAHCVSEWGPQFRPAYLHLPEA------------RRQLGDPPLLALTATATP 106
Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517
I ALRTP ++ R NL S+ ++ +LR
Sbjct: 107 RVRQDIVEKLALRTPRIIVRGFDRPNLVWSVFETADKAERVRAVLR 152
[87][TOP]
>UniRef100_C0VQY9 ATP-dependent DNA helicase n=1 Tax=Corynebacterium glucuronolyticum
ATCC 51867 RepID=C0VQY9_9CORY
Length = 694
Score = 68.2 bits (165), Expect = 3e-10
Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Frame = +2
Query: 8 EGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPG 187
E + G VDVL +SPERL++ F + + + G G
Sbjct: 110 EAAIRSGQVDVLLISPERLVNPDFREKILPYLIVGLG----------------------- 146
Query: 188 GRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLAL 367
+VV+DEAHCIS+W H+FRP Y + + L+ S L P G+P VLA
Sbjct: 147 ---------MVVVDEAHCISDWGHDFRPDYRRIQELLN----SDLDP--GTP----VLAT 187
Query: 368 TATASVATAAAITSALRTPT-VVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
TATA+ A + S L T V+ + RT+L LS+V A+ + +L
Sbjct: 188 TATANDRVVADVVSQLGPDTGVIRGGLDRTSLHLSVVHLDDPTARAAWIAGIL 240
[88][TOP]
>UniRef100_A6CHS6 ATP-dependent DNA helicase recQ n=1 Tax=Bacillus sp. SG-1
RepID=A6CHS6_9BACI
Length = 707
Score = 68.2 bits (165), Expect = 3e-10
Identities = 48/163 (29%), Positives = 71/163 (43%), Gaps = 5/163 (3%)
Frame = +2
Query: 5 IEGRLLE---GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGG 175
IE RL E G +++++PERL S F ++R
Sbjct: 97 IERRLSEAELGVYKLIYIAPERLESPYFVQYLR--------------------------- 129
Query: 176 DGPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPA 355
+P+ LV +DEAHCIS+W H+FRP+YL + D L G P + P
Sbjct: 130 --------NLPIPLVAVDEAHCISQWGHDFRPSYLKIKDLLKGLPSN-----------PV 170
Query: 356 VLALTATASVATAAAITSAL--RTPTVVASDVARTNLQLSIVR 478
VLALTATA+ I ++L + +R NL +++
Sbjct: 171 VLALTATATPQVQNDICASLEIEEENTFITGFSRENLSFKVIK 213
[89][TOP]
>UniRef100_UPI0001976EF0 ATP-dependent DNA helicase RecQ n=1 Tax=Bifidobacterium bifidum
NCIMB 41171 RepID=UPI0001976EF0
Length = 670
Score = 67.8 bits (164), Expect = 4e-10
Identities = 46/157 (29%), Positives = 67/157 (42%), Gaps = 2/157 (1%)
Frame = +2
Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202
+G + +L+V+PERL +ERF +F A R
Sbjct: 111 QGDIKLLYVAPERLETERFRNF-----------------------------------ATR 135
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
VP+SLV +DEAHC+S+W +FR +YL + + + G P P V A TATA+
Sbjct: 136 VPISLVAVDEAHCVSQWGQDFRSSYLGIGEFIAGLPA-----------RPTVAAFTATAT 184
Query: 383 VATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPT 487
I L P V + R NL +++ T
Sbjct: 185 ERVRCDIIGILGLNAPQVTVTGFDRENLYFDVLKIET 221
[90][TOP]
>UniRef100_UPI00016E7C7A UPI00016E7C7A related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E7C7A
Length = 1231
Score = 67.8 bits (164), Expect = 4e-10
Identities = 56/172 (32%), Positives = 71/172 (41%), Gaps = 4/172 (2%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
++ G V VL +SPE L+ GGGG G G +
Sbjct: 594 KVKSGQVCVLLLSPEALV---------------GGGGSGSGCLPSAQ------------- 625
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
PV+ +DEAHC+SEWSHNFRP YL L L G + F L LTA
Sbjct: 626 -ELPPVAFACIDEAHCVSEWSHNFRPCYLRLCKVLRERLGVQCF-----------LGLTA 673
Query: 374 TASVATAAAITSAL----RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517
TA+++TA I L + V S NL LS+ D L LL+
Sbjct: 674 TATLSTALDIARHLDIRNQDGIAVRSAAVPPNLHLSVSMDREKDQALVSLLK 725
[91][TOP]
>UniRef100_UPI00016E7C64 UPI00016E7C64 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E7C64
Length = 1216
Score = 67.8 bits (164), Expect = 4e-10
Identities = 56/172 (32%), Positives = 71/172 (41%), Gaps = 4/172 (2%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
++ G V VL +SPE L+ GGGG G G +
Sbjct: 568 KVKSGQVCVLLLSPEALV---------------GGGGSGSGCLPSAQ------------- 599
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
PV+ +DEAHC+SEWSHNFRP YL L L G + F L LTA
Sbjct: 600 -ELPPVAFACIDEAHCVSEWSHNFRPCYLRLCKVLRERLGVQCF-----------LGLTA 647
Query: 374 TASVATAAAITSAL----RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517
TA+++TA I L + V S NL LS+ D L LL+
Sbjct: 648 TATLSTALDIARHLDIRNQDGIAVRSAAVPPNLHLSVSMDREKDQALVSLLK 699
[92][TOP]
>UniRef100_UPI00016E7C63 UPI00016E7C63 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E7C63
Length = 1484
Score = 67.8 bits (164), Expect = 4e-10
Identities = 56/172 (32%), Positives = 71/172 (41%), Gaps = 4/172 (2%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
++ G V VL +SPE L+ GGGG G G +
Sbjct: 772 KVKSGQVCVLLLSPEALV---------------GGGGSGSGCLPSAQ------------- 803
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
PV+ +DEAHC+SEWSHNFRP YL L L G + F L LTA
Sbjct: 804 -ELPPVAFACIDEAHCVSEWSHNFRPCYLRLCKVLRERLGVQCF-----------LGLTA 851
Query: 374 TASVATAAAITSAL----RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517
TA+++TA I L + V S NL LS+ D L LL+
Sbjct: 852 TATLSTALDIARHLDIRNQDGIAVRSAAVPPNLHLSVSMDREKDQALVSLLK 903
[93][TOP]
>UniRef100_Q9KCG4 ATP-dependent DNA helicase n=1 Tax=Bacillus halodurans
RepID=Q9KCG4_BACHD
Length = 491
Score = 67.8 bits (164), Expect = 4e-10
Identities = 41/109 (37%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Frame = +2
Query: 191 RAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALT 370
R +V VS V+DEAHCIS+W H+FRP +L L+D H P LALT
Sbjct: 123 RLKQVKVSYFVVDEAHCISQWGHDFRPDFLRLSDVKHQLGN------------PPCLALT 170
Query: 371 ATASVATAAAITSALR--TPTVVASDVARTNLQLSIVRAPTVDAKLPLL 511
ATA+ A I + L + V R N+ +S+ + PTV KL ++
Sbjct: 171 ATATPAVQQDILTQLSIDEAVTIVHSVDRPNISISVEQTPTVKDKLEVI 219
[94][TOP]
>UniRef100_Q926Z0 Lin2900 protein n=1 Tax=Listeria innocua RepID=Q926Z0_LISIN
Length = 590
Score = 67.8 bits (164), Expect = 4e-10
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Frame = +2
Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379
+VP+SL +DEAHCIS+W H+FRP+YL L D+L P V+ALTATA
Sbjct: 129 QVPISLFAIDEAHCISQWGHDFRPSYLSLCDSLD-----------KMTRRPLVIALTATA 177
Query: 380 SVATAAAITSALRTP--TVVASDVARTNLQLSIVRAPTVDAKL 502
+ A + I L+ +V+ + +R NL +V+ D L
Sbjct: 178 TQAVSDDICRLLKIKPNSVIKTGFSRDNLAFQVVKGQDKDKYL 220
[95][TOP]
>UniRef100_B4SD05 ATP-dependent DNA helicase RecQ n=1 Tax=Pelodictyon
phaeoclathratiforme BU-1 RepID=B4SD05_PELPB
Length = 599
Score = 67.8 bits (164), Expect = 4e-10
Identities = 54/170 (31%), Positives = 75/170 (44%), Gaps = 2/170 (1%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
RLL G +D+L+++PER + F +
Sbjct: 98 RLLSGKLDLLYLAPERFILSHFREILG--------------------------------- 124
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
+V +S+ V+DEAHCISEW H+FRP YL L+D + LF G P V A TA
Sbjct: 125 --QVQLSMAVIDEAHCISEWGHDFRPDYLSLSDLV------TLF--AGIP----VAAFTA 170
Query: 374 TASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517
TA+ I ALR P +V + R NL + V+A+L LL+
Sbjct: 171 TATTRVQQDILDKLALRNPLIVRASFDRPNLLYDVRFKDNVEAQLLSLLK 220
[96][TOP]
>UniRef100_C0EDK9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum
DSM 5476 RepID=C0EDK9_9CLOT
Length = 613
Score = 67.8 bits (164), Expect = 4e-10
Identities = 47/151 (31%), Positives = 65/151 (43%), Gaps = 2/151 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
GA +L+V+PERLL++ F SF A
Sbjct: 111 GAYKILYVAPERLLTDEFLSF-----------------------------------ACSC 135
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
+SLV +DEAHC+S+W +FRP+YL + D + R P P V A TATA+
Sbjct: 136 EISLVSVDEAHCVSQWGQDFRPSYLKILDFI-----------RALPSRPVVAAFTATATA 184
Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSI 472
I LR+PT+V + R NL +
Sbjct: 185 QVREDIVRILELRSPTLVTTGFDRKNLYFEV 215
[97][TOP]
>UniRef100_UPI0000E5E124 RecQ protein-like 4 n=1 Tax=Homo sapiens RepID=UPI0000E5E124
Length = 1208
Score = 67.4 bits (163), Expect = 6e-10
Identities = 45/121 (37%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Frame = +2
Query: 164 GAGGDGPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSP 343
GAGG P + P PV+ +DEAHC+S+WSHNFRP YL + L G F
Sbjct: 586 GAGGLPPAAQLP--PVAFACIDEAHCLSQWSHNFRPCYLRVCKVLRERMGVHCF------ 637
Query: 344 HAPAVLALTATASVATAAAITSAL---RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLL 514
L LTATA+ TA+ + L P + TNL LS+ D L LL
Sbjct: 638 -----LGLTATATRRTASDVAQHLAVAEEPDLHGPAPVPTNLHLSVSMDRDTDQALLTLL 692
Query: 515 R 517
+
Sbjct: 693 Q 693
[98][TOP]
>UniRef100_Q8DBI6 DNA helicase n=1 Tax=Vibrio vulnificus RepID=Q8DBI6_VIBVU
Length = 639
Score = 67.4 bits (163), Expect = 6e-10
Identities = 52/168 (30%), Positives = 73/168 (43%), Gaps = 2/168 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + +L +S ERL +ERF F+ +V
Sbjct: 106 GEIKILMISVERLKNERFRQFIA-----------------------------------QV 130
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P+SL+V+DEAHCISEW HNFRP YL L + + + P VL LTATA+
Sbjct: 131 PISLLVVDEAHCISEWGHNFRPDYLKLPSY------------QATLNIPQVLLLTATATE 178
Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
A + A++ VV + R NL L + D K LL+++
Sbjct: 179 NVIADMQRKFAIKKDNVVVTGFYRANLDLHVTPCRNED-KADALLKIV 225
[99][TOP]
>UniRef100_Q7MID7 DNA helicase n=1 Tax=Vibrio vulnificus YJ016 RepID=Q7MID7_VIBVY
Length = 704
Score = 67.4 bits (163), Expect = 6e-10
Identities = 52/168 (30%), Positives = 73/168 (43%), Gaps = 2/168 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + +L +S ERL +ERF F+ +V
Sbjct: 171 GEIKILMISVERLKNERFRQFIA-----------------------------------QV 195
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P+SL+V+DEAHCISEW HNFRP YL L + + + P VL LTATA+
Sbjct: 196 PISLLVVDEAHCISEWGHNFRPDYLKLPSY------------QATLNIPQVLLLTATATE 243
Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
A + A++ VV + R NL L + D K LL+++
Sbjct: 244 NVIADMQRKFAIKKDNVVVTGFYRANLDLHVTPCRNED-KADALLKIV 290
[100][TOP]
>UniRef100_Q4KJZ8 ATP-dependent DNA helicase, RecQ family n=1 Tax=Pseudomonas
fluorescens Pf-5 RepID=Q4KJZ8_PSEF5
Length = 644
Score = 67.4 bits (163), Expect = 6e-10
Identities = 51/158 (32%), Positives = 70/158 (44%), Gaps = 2/158 (1%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
+ R G + +L +S ERL +ERF +F++
Sbjct: 95 VMARARSGELKILMISVERLKNERFRNFLQ------------------------------ 124
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
+VP+SL+V+DEAHCISEW HNFRP YL L D R F + P L
Sbjct: 125 -----QVPISLLVVDEAHCISEWGHNFRPDYLKLPDY------QRQF------NIPQALL 167
Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQLSI 472
LTATA+ A + + A+ VV + R NL L +
Sbjct: 168 LTATATPKVIADMQAKFAIAQQDVVTTGFYRPNLNLLV 205
[101][TOP]
>UniRef100_C6D8B1 ATP-dependent DNA helicase RecQ n=1 Tax=Paenibacillus sp. JDR-2
RepID=C6D8B1_PAESJ
Length = 721
Score = 67.4 bits (163), Expect = 6e-10
Identities = 39/91 (42%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Frame = +2
Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388
+ ++ +DEAHC+S+W H+FRP+Y LA G G P+ P V A TATA+
Sbjct: 132 IPMIAIDEAHCVSQWGHDFRPSYRQLA----GWIGK-------MPNRPLVAAFTATATQE 180
Query: 389 TAAAITS--ALRTPTVVASDVARTNLQLSIV 475
AA IT+ LR P V + AR NL LS+V
Sbjct: 181 VAADITAMLGLREPNVFVTGFARPNLSLSVV 211
[102][TOP]
>UniRef100_C7N3V8 ATP-dependent DNA helicase RecQ n=1 Tax=Slackia heliotrinireducens
DSM 20476 RepID=C7N3V8_SLAHD
Length = 626
Score = 67.4 bits (163), Expect = 6e-10
Identities = 51/171 (29%), Positives = 71/171 (41%), Gaps = 2/171 (1%)
Frame = +2
Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196
+++G+V +L+VSPERL +E F
Sbjct: 107 VMDGSVKLLYVSPERLETEEFRDL-----------------------------------C 131
Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376
P ++ +DEAHCIS+W H+FRP+Y+ L + P P V A TAT
Sbjct: 132 ANFPPQMIAIDEAHCISQWGHDFRPSYMRLRRFI-----------ESLPQRPPVCAFTAT 180
Query: 377 ASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
A+ I ALR P V + R NL+ S++R P K LL LL
Sbjct: 181 ATERVRQDILEQLALRDPFTVVASFDRPNLRFSVIR-PRERDKDKRLLELL 230
[103][TOP]
>UniRef100_C1ZWP8 ATP-dependent DNA helicase, RecQ family n=1 Tax=Rhodothermus
marinus DSM 4252 RepID=C1ZWP8_RHOMR
Length = 1263
Score = 67.4 bits (163), Expect = 6e-10
Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Frame = +2
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
A R+P+SL V+DEAHC+SEW H+FRP+YLH+ L S + P ++ALT
Sbjct: 625 AARLPISLAVVDEAHCVSEWGHDFRPSYLHMTHNLQKFCAS-------AASRPTLVALTG 677
Query: 374 TASVATAAAITSAL----RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517
TAS A I + L + V+ R ++ + R P +AK+ L R
Sbjct: 678 TASFAVLTDIQAELGITDESAIVLPRSFDRKEIRFHVERVPR-EAKMHALKR 728
[104][TOP]
>UniRef100_C9JFV7 Putative uncharacterized protein RECQL4 n=1 Tax=Homo sapiens
RepID=C9JFV7_HUMAN
Length = 1207
Score = 67.4 bits (163), Expect = 6e-10
Identities = 45/121 (37%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Frame = +2
Query: 164 GAGGDGPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSP 343
GAGG P + P PV+ +DEAHC+S+WSHNFRP YL + L G F
Sbjct: 586 GAGGLPPAAQLP--PVAFACIDEAHCLSQWSHNFRPCYLRVCKVLRERMGVHCF------ 637
Query: 344 HAPAVLALTATASVATAAAITSAL---RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLL 514
L LTATA+ TA+ + L P + TNL LS+ D L LL
Sbjct: 638 -----LGLTATATRRTASDVAQHLAVAEEPDLHGPAPVPTNLHLSVSMDRDTDQALLTLL 692
Query: 515 R 517
+
Sbjct: 693 Q 693
[105][TOP]
>UniRef100_O94761 ATP-dependent DNA helicase Q4 n=1 Tax=Homo sapiens
RepID=RECQ4_HUMAN
Length = 1208
Score = 67.4 bits (163), Expect = 6e-10
Identities = 45/121 (37%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Frame = +2
Query: 164 GAGGDGPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSP 343
GAGG P + P PV+ +DEAHC+S+WSHNFRP YL + L G F
Sbjct: 586 GAGGLPPAAQLP--PVAFACIDEAHCLSQWSHNFRPCYLRVCKVLRERMGVHCF------ 637
Query: 344 HAPAVLALTATASVATAAAITSAL---RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLL 514
L LTATA+ TA+ + L P + TNL LS+ D L LL
Sbjct: 638 -----LGLTATATRRTASDVAQHLAVAEEPDLHGPAPVPTNLHLSVSMDRDTDQALLTLL 692
Query: 515 R 517
+
Sbjct: 693 Q 693
[106][TOP]
>UniRef100_Q39S39 ATP-dependent DNA helicase RecQ n=1 Tax=Geobacter metallireducens
GS-15 RepID=Q39S39_GEOMG
Length = 601
Score = 67.0 bits (162), Expect = 7e-10
Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 2/160 (1%)
Frame = +2
Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181
++ RL G +D+L+V+PERL+++ F +R
Sbjct: 99 QVLARLHAGELDLLYVAPERLMTDAFLERLR----------------------------- 129
Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361
+PV+L +DEAHC+S+W H+FRP Y+ L L G LFP G P V+
Sbjct: 130 ------EIPVALFAIDEAHCVSQWGHDFRPEYVGLG-RLRG-----LFP--GVP----VI 171
Query: 362 ALTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIV 475
ALTATA V T + I LR V + R N++ ++V
Sbjct: 172 ALTATADVQTRSDIIDRLGLRDAQVYVTGFDRPNIRYTVV 211
[107][TOP]
>UniRef100_B7GUC2 ATP-dependent DNA helicase RecQ n=1 Tax=Bifidobacterium longum
subsp. infantis ATCC 15697 RepID=B7GUC2_BIFLI
Length = 651
Score = 67.0 bits (162), Expect = 7e-10
Identities = 46/156 (29%), Positives = 65/156 (41%), Gaps = 2/156 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + +L+V+PERL + RF F A R
Sbjct: 108 GQIKLLYVAPERLETGRFRDF-----------------------------------AART 132
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P+SL+ +DEAHC+S+W +FR +YL + D + G P P V A TATA+
Sbjct: 133 PISLIAVDEAHCVSQWGQDFRSSYLGIGDFI-----------AGLPQRPPVGAFTATATE 181
Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPT 487
I LR P V + R+NL +V+ T
Sbjct: 182 RVRRDIVGLLGLRNPAVTVTGFDRSNLYFDVVKLET 217
[108][TOP]
>UniRef100_C1YVB1 ATP-dependent DNA helicase RecQ n=1 Tax=Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111 RepID=C1YVB1_NOCDA
Length = 723
Score = 67.0 bits (162), Expect = 7e-10
Identities = 52/168 (30%), Positives = 69/168 (41%), Gaps = 6/168 (3%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G VDVL VSPERL + F + G G
Sbjct: 129 GRVDVLLVSPERLNNPEFRDRVLPELAAGAG----------------------------- 159
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
LVV+DEAHC+S+W H+FRP Y + LH P G P VLA TATA+
Sbjct: 160 ---LVVIDEAHCVSDWGHDFRPDYRRIRSLLHDL-------PEGVP----VLATTATANE 205
Query: 386 ATAAAITSALRT------PTVVASDVARTNLQLSIVRAPTVDAKLPLL 511
+ L+ V+ + R +L+L++VR P A+L L
Sbjct: 206 RVTRDVAEQLQAGGERADTLVLRGSLERESLRLAVVRLPDPTARLSWL 253
[109][TOP]
>UniRef100_C1WNZ0 Superfamily II DNA helicase n=1 Tax=Kribbella flavida DSM 17836
RepID=C1WNZ0_9ACTO
Length = 706
Score = 67.0 bits (162), Expect = 7e-10
Identities = 53/160 (33%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
IE L GA+DVL VSPERL + F + DG AG
Sbjct: 114 IENDLRTGAIDVLLVSPERLANPGFGRRVL---------------------DGLAG---- 148
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
+ L+V+DEAH +S+W H+FRP Y ++D L + +P P VLA
Sbjct: 149 -------QIGLLVIDEAHAVSDWGHDFRPDYRRVSDVLQ----------KLNPQTP-VLA 190
Query: 365 LTATASVATAAAITSALRTPT-VVASDVARTNLQLSIVRA 481
TATA+ + L T V+ +AR++LQL++V A
Sbjct: 191 TTATANARVTDDVAHQLGASTLVLRGPLARSSLQLAVVDA 230
[110][TOP]
>UniRef100_C0V1H2 ATP-dependent DNA helicase, RecQ family n=1 Tax=Thermobaculum
terrenum ATCC BAA-798 RepID=C0V1H2_9BACT
Length = 532
Score = 67.0 bits (162), Expect = 7e-10
Identities = 45/108 (41%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +2
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS- 382
PVSL V+DEAHCISEW ++FRP+YL L + + P VLALTATA+
Sbjct: 100 PVSLFVVDEAHCISEWGYDFRPSYLQLGEVVE------------EVGRPPVLALTATATP 147
Query: 383 -VATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
V A T +R P VVA R NL L + R + + +L LL
Sbjct: 148 WVRQDIARTLGMRDPLVVAHGFDRPNLFLQVHRLEQHEDERQVLEALL 195
[111][TOP]
>UniRef100_Q2H7F2 Putative uncharacterized protein n=1 Tax=Chaetomium globosum
RepID=Q2H7F2_CHAGB
Length = 747
Score = 67.0 bits (162), Expect = 7e-10
Identities = 55/171 (32%), Positives = 70/171 (40%), Gaps = 2/171 (1%)
Frame = +2
Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196
L EG + +L+ +PERL +E F + MR H G
Sbjct: 196 LREGKLRILYCAPERLNNEGFVAMMR-HVRGG---------------------------- 226
Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376
V L+ +DEAHCISEW H+FRP YL +A R V+ LTAT
Sbjct: 227 ----VRLLAVDEAHCISEWGHSFRPEYLKVARFADEIAAER------------VICLTAT 270
Query: 377 ASVATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
A+ I SA + PT V + R NL L T K PLL + L
Sbjct: 271 ATPKVVDDICSAFKIPTEGVFRTSAYRPNLNLHARAVKTKHDKYPLLFQFL 321
[112][TOP]
>UniRef100_UPI0001792BCB PREDICTED: similar to rothmund-thomson syndrome DNA helicase recq4
n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792BCB
Length = 1219
Score = 66.6 bits (161), Expect = 1e-09
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Frame = +2
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P++ V LDEAHC+S+WSHNFRP+YL + L G + F L LTATA++
Sbjct: 652 PIAFVCLDEAHCLSQWSHNFRPSYLMICQVLREKFGVKTF-----------LGLTATATI 700
Query: 386 ATAAAITSALRTP----TVVASDVARTNLQLSIVRAPTVDAKLPLLL 514
+T ++I S L +++ NL LS+ R D L LL
Sbjct: 701 STVSSIASELMLDDDPNSIIKDTPLPDNLMLSVSRDKDRDKALINLL 747
[113][TOP]
>UniRef100_UPI0000E21CFA PREDICTED: RecQ protein-like 4 n=1 Tax=Pan troglodytes
RepID=UPI0000E21CFA
Length = 1208
Score = 66.6 bits (161), Expect = 1e-09
Identities = 45/121 (37%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Frame = +2
Query: 164 GAGGDGPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSP 343
GAGG P + P PV+ +DEAHC+S+WSHNFRP YL + L G F
Sbjct: 586 GAGGLPPATQLP--PVAFACIDEAHCLSQWSHNFRPCYLRVCKVLRERMGVHCF------ 637
Query: 344 HAPAVLALTATASVATAAAITSAL---RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLL 514
L LTATA+ TA+ + L P + TNL LS+ D L LL
Sbjct: 638 -----LGLTATATRRTASDVAQHLAVAEEPDLHGPAPVPTNLHLSVSMDRDTDQALLTLL 692
Query: 515 R 517
+
Sbjct: 693 Q 693
[114][TOP]
>UniRef100_UPI00017B0A06 UPI00017B0A06 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B0A06
Length = 1453
Score = 66.6 bits (161), Expect = 1e-09
Identities = 55/172 (31%), Positives = 70/172 (40%), Gaps = 4/172 (2%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
++ G V VL +SPE L+ GGGG G G +
Sbjct: 770 KVKSGQVCVLLLSPEALV---------------GGGGSGSGCLPSAQ------------- 801
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
PV+ +DEAHC+SEWSHNFRP YL L L G +L LTA
Sbjct: 802 -ELPPVAFACIDEAHCVSEWSHNFRPCYLRLCKVLRDRLG-----------VQCLLGLTA 849
Query: 374 TASVATAAAITSAL----RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517
TA+++TA I L + V S NL LS+ D L LL+
Sbjct: 850 TATLSTALDIARHLDINDQDGIAVRSAAVPPNLHLSVSTDREKDQALVSLLK 901
[115][TOP]
>UniRef100_UPI00017B0A05 UPI00017B0A05 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B0A05
Length = 1465
Score = 66.6 bits (161), Expect = 1e-09
Identities = 55/172 (31%), Positives = 70/172 (40%), Gaps = 4/172 (2%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
++ G V VL +SPE L+ GGGG G G +
Sbjct: 782 KVKSGQVCVLLLSPEALV---------------GGGGSGSGCLPSAQ------------- 813
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
PV+ +DEAHC+SEWSHNFRP YL L L G +L LTA
Sbjct: 814 -ELPPVAFACIDEAHCVSEWSHNFRPCYLRLCKVLRDRLG-----------VQCLLGLTA 861
Query: 374 TASVATAAAITSAL----RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517
TA+++TA I L + V S NL LS+ D L LL+
Sbjct: 862 TATLSTALDIARHLDINDQDGIAVRSAAVPPNLHLSVSTDREKDQALVSLLK 913
[116][TOP]
>UniRef100_Q4RLC3 Chromosome 21 SCAF15022, whole genome shotgun sequence. (Fragment)
n=1 Tax=Tetraodon nigroviridis RepID=Q4RLC3_TETNG
Length = 910
Score = 66.6 bits (161), Expect = 1e-09
Identities = 55/172 (31%), Positives = 70/172 (40%), Gaps = 4/172 (2%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
++ G V VL +SPE L+ GGGG G G +
Sbjct: 278 KVKSGQVCVLLLSPEALV---------------GGGGSGSGCLPSAQ------------- 309
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
PV+ +DEAHC+SEWSHNFRP YL L L G +L LTA
Sbjct: 310 -ELPPVAFACIDEAHCVSEWSHNFRPCYLRLCKVLRDRLG-----------VQCLLGLTA 357
Query: 374 TASVATAAAITSAL----RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517
TA+++TA I L + V S NL LS+ D L LL+
Sbjct: 358 TATLSTALDIARHLDINDQDGIAVRSAAVPPNLHLSVSTDREKDQALVSLLK 409
[117][TOP]
>UniRef100_Q3A2W5 ATP-dependent DNA helicase RecQ n=1 Tax=Pelobacter carbinolicus DSM
2380 RepID=Q3A2W5_PELCD
Length = 637
Score = 66.6 bits (161), Expect = 1e-09
Identities = 52/170 (30%), Positives = 73/170 (42%), Gaps = 2/170 (1%)
Frame = +2
Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196
L +G++ +L+++PERL +ERF H + G
Sbjct: 104 LADGSLKILYIAPERLSNERFL-----HRLQGR--------------------------- 131
Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376
P++L+ +DEAHCISEW HNFRP YL +A R VLALTAT
Sbjct: 132 ---PIALLAVDEAHCISEWGHNFRPEYLKIARMAEELKVGR------------VLALTAT 176
Query: 377 ASVATAAAITSA--LRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A+ A I A + + + R NL L++ P + LL RL
Sbjct: 177 ATPDVADDIRRAFHIADNDQIQTSFHRPNLHLTVSPCPAPQRRQQLLQRL 226
[118][TOP]
>UniRef100_B5ZD27 ATP-dependent DNA helicase RecQ n=2 Tax=Gluconacetobacter
diazotrophicus PAl 5 RepID=B5ZD27_GLUDA
Length = 620
Score = 66.6 bits (161), Expect = 1e-09
Identities = 53/159 (33%), Positives = 68/159 (42%), Gaps = 2/159 (1%)
Frame = +2
Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181
RI L+ G +D+L+VSPERLLS G
Sbjct: 112 RIRADLVAGRLDILYVSPERLLSP-----------------------------------G 136
Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361
R R+ +S++ +DEAHCIS W H FRP Y LA PG PR +
Sbjct: 137 MLDRLSRLTLSVIAIDEAHCISAWGHEFRPEYRALARLPEHFPG----VPR--------I 184
Query: 362 ALTATASVATAAAITSALRTP--TVVASDVARTNLQLSI 472
ALTATA T A I AL P V+ + R NL +++
Sbjct: 185 ALTATADPRTQADILDALAMPDARVLRASFHRPNLDIAV 223
[119][TOP]
>UniRef100_A9B0G6 ATP-dependent DNA helicase, RecQ family n=1 Tax=Herpetosiphon
aurantiacus ATCC 23779 RepID=A9B0G6_HERA2
Length = 864
Score = 66.6 bits (161), Expect = 1e-09
Identities = 41/107 (38%), Positives = 55/107 (51%)
Frame = +2
Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379
+V +SL V+DEAHC+S W +FRP YL + +AL P VL LTATA
Sbjct: 152 QVGISLFVVDEAHCVSLWGFSFRPDYLFIREALRELGN------------PLVLGLTATA 199
Query: 380 SVATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
S AT AI L V ++V R NL +++A + K +L L
Sbjct: 200 SPATEKAICEQLGDLETVRTNVFRPNLHFELIKASNKEKKQAAILSL 246
[120][TOP]
>UniRef100_A4SN75 ATP-dependent DNA helicase RecQ n=1 Tax=Aeromonas salmonicida
subsp. salmonicida A449 RepID=A4SN75_AERS4
Length = 641
Score = 66.6 bits (161), Expect = 1e-09
Identities = 49/163 (30%), Positives = 73/163 (44%), Gaps = 2/163 (1%)
Frame = +2
Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181
R+ + +G + +L +S ERL +ERF F++
Sbjct: 95 RVMQQASDGQLKILMISVERLKNERFRRFIQ----------------------------- 125
Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361
+VP+S++V+DEAHCISEW HNFRP YL +L R P VL
Sbjct: 126 ------QVPLSMLVVDEAHCISEWGHNFRPDYL------------KLPAYRRELKIPQVL 167
Query: 362 ALTATASVATAAAITSA--LRTPTVVASDVARTNLQLSIVRAP 484
LTATA+ A A + + + ++ + R NL L++V P
Sbjct: 168 LLTATATPAVMADMQAKFDIEDEGLIVTGFYRANLDLAVVPQP 210
[121][TOP]
>UniRef100_A4SG55 ATP-dependent DNA helicase RecQ n=1 Tax=Chlorobium phaeovibrioides
DSM 265 RepID=A4SG55_PROVI
Length = 622
Score = 66.6 bits (161), Expect = 1e-09
Identities = 53/172 (30%), Positives = 74/172 (43%)
Frame = +2
Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181
++ L G++D+L+V+PER + F +
Sbjct: 110 KVLDELESGSLDLLYVAPERFALDSFRKLIG----------------------------- 140
Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361
+VPVS+ V+DEAHCISEW H+FRP YL L+ + +F R P A
Sbjct: 141 ------KVPVSMAVIDEAHCISEWGHDFRPDYLQLSSLV------TMF--RDVP--VAGF 184
Query: 362 ALTATASVATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517
TAT V ALR P V + R NL S++ VDA++ LLR
Sbjct: 185 TATATQRVQLDTLRRLALREPFTVRASFDRPNLTYSVLFKDGVDAQIVSLLR 236
[122][TOP]
>UniRef100_Q2C8E2 Putative putative ATP-dependent DNA helicase RecQ n=1
Tax=Photobacterium sp. SKA34 RepID=Q2C8E2_9GAMM
Length = 638
Score = 66.6 bits (161), Expect = 1e-09
Identities = 55/169 (32%), Positives = 74/169 (43%), Gaps = 2/169 (1%)
Frame = +2
Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202
+G + VL +S ERL +ERF F+ +
Sbjct: 102 QGEIKVLMISVERLKNERFRHFIS-----------------------------------Q 126
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
VP+SL+V+DEAHCISEW HNFRP YL L + S + P VL LTATA+
Sbjct: 127 VPISLLVVDEAHCISEWGHNFRPDYLKLPYY------------QQSLNIPQVLLLTATAT 174
Query: 383 VATAAAITSA--LRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
+ + +V + R NL LSI+ A D KL +L + L
Sbjct: 175 PTVINDMQDKFNIAKDDIVVTGFYRKNLDLSILAAQD-DEKLDVLQQQL 222
[123][TOP]
>UniRef100_C6MFV5 ATP-dependent DNA helicase RecQ n=1 Tax=Nitrosomonas sp. AL212
RepID=C6MFV5_9PROT
Length = 635
Score = 66.6 bits (161), Expect = 1e-09
Identities = 50/160 (31%), Positives = 71/160 (44%), Gaps = 2/160 (1%)
Frame = +2
Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181
R+E +LL D+L+V+PERLL+ RF + M
Sbjct: 132 RVEQKLLADEYDLLYVAPERLLTARFLNLMT----------------------------- 162
Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361
R+P++L +DEAHC+S+W H+FRP Y+ L+ LH FP A +
Sbjct: 163 ------RIPIALFAIDEAHCVSQWGHDFRPEYIQLS-ILH-----ERFP------AIPRI 204
Query: 362 ALTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIV 475
ALTATA + T I L V S R N++ I+
Sbjct: 205 ALTATADMDTRKEIIERLGLDLAKVFVSSFDRPNIRYQII 244
[124][TOP]
>UniRef100_B1S4T9 Putative uncharacterized protein n=1 Tax=Bifidobacterium dentium
ATCC 27678 RepID=B1S4T9_9BIFI
Length = 653
Score = 66.6 bits (161), Expect = 1e-09
Identities = 46/156 (29%), Positives = 66/156 (42%), Gaps = 2/156 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + +L+V+PERL +ERF +F A R
Sbjct: 110 GFIKLLYVAPERLETERFRNF-----------------------------------ASRT 134
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P+SLV +DEAHC+S+W +FR +YL + + + P P V A TATA+
Sbjct: 135 PISLVAVDEAHCVSQWGQDFRSSYLGIGEFIANLPA-----------RPTVAAFTATATE 183
Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPT 487
I S LR P V + R NL +++ T
Sbjct: 184 RVRHDIVSMLGLRDPDVTVTGFDRPNLYFDVIKLET 219
[125][TOP]
>UniRef100_A7SUT5 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SUT5_NEMVE
Length = 714
Score = 66.6 bits (161), Expect = 1e-09
Identities = 44/123 (35%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Frame = +2
Query: 161 GGAGGDGPGGRAPRVP-VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRG 337
GG GG G + ++P ++ +DEAHC+SEWSHNFRP+YL + L G + F
Sbjct: 98 GGMGGSGCLPSSTKMPPIAFACIDEAHCLSEWSHNFRPSYLRVCKILRDRYGVQCF---- 153
Query: 338 SPHAPAVLALTATASVATAAAITSAL---RTPTVVASDVARTNLQLSIVRAPTVDAKLPL 508
L LTATA+ +TA ++ L V+ NL+LS+ R D L
Sbjct: 154 -------LGLTATATQSTADSVAQHLGIADAGAVIRGAAVPPNLRLSVSRDRDKDKALIE 206
Query: 509 LLR 517
LL+
Sbjct: 207 LLQ 209
[126][TOP]
>UniRef100_Q8G567 ATP-dependent DNA helicase RecQ n=1 Tax=Bifidobacterium longum
RepID=Q8G567_BIFLO
Length = 651
Score = 66.2 bits (160), Expect = 1e-09
Identities = 46/156 (29%), Positives = 64/156 (41%), Gaps = 2/156 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + +L+V+PERL + RF F A R
Sbjct: 108 GQIKLLYVAPERLETGRFRDF-----------------------------------AART 132
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P+SL+ +DEAHC+S+W +FR +YL + D + G P P V A TATA+
Sbjct: 133 PISLIAVDEAHCVSQWGQDFRSSYLGIGDFI-----------AGLPQRPPVGAFTATATE 181
Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPT 487
I LR P V + R NL +V+ T
Sbjct: 182 RVRRDIVGLLGLRNPAVTVTGFDRPNLYFDVVKLET 217
[127][TOP]
>UniRef100_Q3ICY6 Putative helicase (RecQ-like) n=1 Tax=Pseudoalteromonas
haloplanktis TAC125 RepID=Q3ICY6_PSEHT
Length = 648
Score = 66.2 bits (160), Expect = 1e-09
Identities = 53/163 (32%), Positives = 67/163 (41%), Gaps = 2/163 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G V VL VS ER +ERF F+ ++
Sbjct: 106 GKVKVLMVSVERFKNERFREFIN-----------------------------------QI 130
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS- 382
VS++V+DEAHCISEW HNFRP YL L R + P VL LTATA+
Sbjct: 131 AVSMLVVDEAHCISEWGHNFRPDYLKLPRY------------REELNIPLVLLLTATATK 178
Query: 383 -VATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPL 508
V A A+ +V + R NL LS++ T D L
Sbjct: 179 KVKRDMAERFAIAPECIVQTGFYRANLDLSVLSVKTADKNTEL 221
[128][TOP]
>UniRef100_B3DT88 Superfamily II DNA helicase n=1 Tax=Bifidobacterium longum DJO10A
RepID=B3DT88_BIFLD
Length = 621
Score = 66.2 bits (160), Expect = 1e-09
Identities = 46/156 (29%), Positives = 64/156 (41%), Gaps = 2/156 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + +L+V+PERL + RF F A R
Sbjct: 78 GQIKLLYVAPERLETGRFRDF-----------------------------------AART 102
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P+SL+ +DEAHC+S+W +FR +YL + D + G P P V A TATA+
Sbjct: 103 PISLIAVDEAHCVSQWGQDFRSSYLGIGDFI-----------AGLPQRPPVGAFTATATE 151
Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPT 487
I LR P V + R NL +V+ T
Sbjct: 152 RVRRDIVGLLGLRNPAVTVTGFDRPNLYFDVVKLET 187
[129][TOP]
>UniRef100_C5E8I0 ATP-dependent DNA helicase RecQ n=1 Tax=Bifidobacterium longum
subsp. infantis CCUG 52486 RepID=C5E8I0_BIFLO
Length = 651
Score = 66.2 bits (160), Expect = 1e-09
Identities = 46/156 (29%), Positives = 64/156 (41%), Gaps = 2/156 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + +L+V+PERL + RF F A R
Sbjct: 108 GQIKLLYVAPERLETGRFRDF-----------------------------------AART 132
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P+SL+ +DEAHC+S+W +FR +YL + D + G P P V A TATA+
Sbjct: 133 PISLIAVDEAHCVSQWGQDFRSSYLGIGDFI-----------AGLPQRPPVGAFTATATE 181
Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPT 487
I LR P V + R NL +V+ T
Sbjct: 182 RVRRDIVGLLGLRNPAVTVTGFDRPNLYFDVVKLET 217
[130][TOP]
>UniRef100_C2GUQ6 ATP-dependent DNA helicase RecQ n=1 Tax=Bifidobacterium longum
subsp. infantis ATCC 55813 RepID=C2GUQ6_BIFLO
Length = 651
Score = 66.2 bits (160), Expect = 1e-09
Identities = 46/156 (29%), Positives = 64/156 (41%), Gaps = 2/156 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + +L+V+PERL + RF F A R
Sbjct: 108 GQIKLLYVAPERLETGRFRDF-----------------------------------AART 132
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P+SL+ +DEAHC+S+W +FR +YL + D + G P P V A TATA+
Sbjct: 133 PISLIAVDEAHCVSQWGQDFRSSYLGIGDFI-----------AGLPQRPPVGAFTATATE 181
Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPT 487
I LR P V + R NL +V+ T
Sbjct: 182 RVRRDIVGLLGLRNPAVTVTGFDRPNLYFDVVKLET 217
[131][TOP]
>UniRef100_B0MTL7 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM
17216 RepID=B0MTL7_9BACT
Length = 641
Score = 66.2 bits (160), Expect = 1e-09
Identities = 54/168 (32%), Positives = 74/168 (44%), Gaps = 2/168 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G V L+V+PERL SE F R R+
Sbjct: 113 GDVKFLYVAPERLASEAFRL-----------------------------------RVQRM 137
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
VSL+ +DEAHCIS+W ++FRP+YL +A+ PG VLALTA+A+
Sbjct: 138 NVSLLAVDEAHCISQWGYDFRPSYLRIAELRERIPG------------VPVLALTASATP 185
Query: 386 ATAAAITSALR--TPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
A I LR P ++ SD +R NL ++ D K LLR++
Sbjct: 186 RVADDIMEKLRFAEPHLLRSDFSRPNLSYAVRH---TDDKNEQLLRII 230
[132][TOP]
>UniRef100_A4E9T7 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens
ATCC 25986 RepID=A4E9T7_9ACTN
Length = 659
Score = 66.2 bits (160), Expect = 1e-09
Identities = 47/151 (31%), Positives = 64/151 (42%), Gaps = 2/151 (1%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
R EG +++V+PERLL RF +F + A + G G
Sbjct: 106 RAREGRYQLMYVAPERLLEPRFLAFAQEAAGSAGIG------------------------ 141
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
V LV +DEAHC+S+W +FRPAYL + + + P P V A TA
Sbjct: 142 -----VPLVAIDEAHCVSQWGQDFRPAYLQIREFID-----------SLPQRPIVAAFTA 185
Query: 374 TASVATAAAITS--ALRTPTVVASDVARTNL 460
TA+ A I L+ P V + R NL
Sbjct: 186 TATERVRADIQQMLGLQNPATVVTGFDRKNL 216
[133][TOP]
>UniRef100_C7GA56 ATP-dependent DNA helicase RecQ n=2 Tax=Roseburia intestinalis
L1-82 RepID=C7GA56_9FIRM
Length = 639
Score = 65.9 bits (159), Expect = 2e-09
Identities = 48/154 (31%), Positives = 68/154 (44%), Gaps = 2/154 (1%)
Frame = +2
Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202
+G +++V+PERL + RF F A R
Sbjct: 80 QGQYKIIYVAPERLNTMRFLDF-----------------------------------ACR 104
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
+S+V +DEAHCIS+W +FRP+YL +AD L +RL P P V A TATA+
Sbjct: 105 ADISMVTVDEAHCISQWGQDFRPSYLEIADFL-----ARL------PRRPVVSAFTATAT 153
Query: 383 VATAAAITSA--LRTPTVVASDVARTNLQLSIVR 478
IT + L+ P V + R NL +V+
Sbjct: 154 ERVKQDITGSLHLQNPVTVVTGFDRPNLFFRVVK 187
[134][TOP]
>UniRef100_UPI0000F2C84B PREDICTED: similar to DNA helicase n=1 Tax=Monodelphis domestica
RepID=UPI0000F2C84B
Length = 1465
Score = 65.9 bits (159), Expect = 2e-09
Identities = 49/125 (39%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Frame = +2
Query: 164 GAGGDG---PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPR 334
GAGG P R P PV+ +DEAHC+S+WSHNFRP YL L L G R F
Sbjct: 837 GAGGFSCLPPAARLP--PVAFACIDEAHCLSQWSHNFRPCYLRLCKVLRERLGVRCF--- 891
Query: 335 GSPHAPAVLALTATASVATAAAITSALRTP--TVVASDVAR--TNLQLSIVRAPTVDAKL 502
L LTATA+ ATA + L P + + +A NL LS+ D L
Sbjct: 892 --------LGLTATATCATARDVGEHLGIPEEAIFGTHLAAIPPNLHLSVSLDRDKDQAL 943
Query: 503 PLLLR 517
LL+
Sbjct: 944 VSLLQ 948
[135][TOP]
>UniRef100_Q47WD5 RecQ domain protein n=1 Tax=Colwellia psychrerythraea 34H
RepID=Q47WD5_COLP3
Length = 690
Score = 65.9 bits (159), Expect = 2e-09
Identities = 48/151 (31%), Positives = 64/151 (42%)
Frame = +2
Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202
+G + VL VS ER +ERF F+ +
Sbjct: 113 DGDIKVLMVSVERFKNERFRQFIES----------------------------------- 137
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
VPVS++V+DEAHCISEW HNFRP YL L S + +L TAT
Sbjct: 138 VPVSMLVVDEAHCISEWGHNFRPDYLKLPSYCQALNISLVL----------LLTATATRK 187
Query: 383 VATAAAITSALRTPTVVASDVARTNLQLSIV 475
V A A+R +V + R+NL LS++
Sbjct: 188 VKQDMAAKFAIRDEHIVQTGFYRSNLDLSVL 218
[136][TOP]
>UniRef100_Q15Y92 ATP-dependent DNA helicase, RecQ family n=1 Tax=Pseudoalteromonas
atlantica T6c RepID=Q15Y92_PSEA6
Length = 681
Score = 65.9 bits (159), Expect = 2e-09
Identities = 52/159 (32%), Positives = 66/159 (41%), Gaps = 2/159 (1%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
R+ G + +L VS ER +ERF F+ +
Sbjct: 112 RVRSGEIKILMVSVERFKNERFRQFIDS-------------------------------- 139
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
V VS++V+DEAHCISEW HNFRP YL L D R + P VL LTA
Sbjct: 140 ---VAVSMLVVDEAHCISEWGHNFRPDYLKLPDY------------RAQLNIPLVLLLTA 184
Query: 374 TAS--VATAAAITSALRTPTVVASDVARTNLQLSIVRAP 484
TA+ V A A+ VV + R NL L + P
Sbjct: 185 TATKKVKLDMAKRFAIEPQHVVQTGFYRKNLDLHVSATP 223
[137][TOP]
>UniRef100_A4VGA1 ATP-dependent DNA helicase domain protein n=1 Tax=Pseudomonas
stutzeri A1501 RepID=A4VGA1_PSEU5
Length = 641
Score = 65.9 bits (159), Expect = 2e-09
Identities = 51/155 (32%), Positives = 68/155 (43%), Gaps = 2/155 (1%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
R G + +L +S ERL +ERF F+
Sbjct: 99 RAKSGELKILMISVERLKNERFRHFIS--------------------------------- 125
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
+VP+SL+V+DEAHCISEW HNFRP YL L D R F + P VL LTA
Sbjct: 126 --QVPISLLVVDEAHCISEWGHNFRPDYLKLPDY------QRQF------NIPQVLLLTA 171
Query: 374 TASVATAAAITS--ALRTPTVVASDVARTNLQLSI 472
TA+ A + + ++ VV + R NL L +
Sbjct: 172 TATPPVIADMQAKFSIAADDVVTTGFYRPNLNLLV 206
[138][TOP]
>UniRef100_A3D4D4 ATP-dependent DNA helicase, RecQ family n=1 Tax=Shewanella baltica
OS155 RepID=A3D4D4_SHEB5
Length = 662
Score = 65.9 bits (159), Expect = 2e-09
Identities = 50/156 (32%), Positives = 67/156 (42%), Gaps = 2/156 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + +L VS ER +ERF F+++ V
Sbjct: 112 GKLKILMVSVERFKNERFRQFIQS-----------------------------------V 136
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS- 382
P+S++V+DEAHCISEW HNFRP YL L D RG P VL LTATA+
Sbjct: 137 PLSMLVVDEAHCISEWGHNFRPDYLKLPDY------------RGELEIPLVLLLTATATR 184
Query: 383 -VATAAAITSALRTPTVVASDVARTNLQLSIVRAPT 487
V A + +V + R NL L+++ T
Sbjct: 185 KVKLDMAKRFDIAPEHIVQTGFYRPNLDLTVLPVST 220
[139][TOP]
>UniRef100_A0AM90 RecQ protein n=1 Tax=Listeria welshimeri serovar 6b str. SLCC5334
RepID=A0AM90_LISW6
Length = 590
Score = 65.9 bits (159), Expect = 2e-09
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Frame = +2
Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379
+VP+SL +DEAHCIS+W H+FRP+YL L ++L P V+ALTATA
Sbjct: 129 QVPISLFAIDEAHCISQWGHDFRPSYLTLCNSLD-----------KMTRRPLVIALTATA 177
Query: 380 SVATAAAITSALRTP--TVVASDVARTNLQLSIVRAPTVDAKL 502
+ A + I L+ +VV + +R NL +V+ D L
Sbjct: 178 TQAVSDDICRLLKIKPNSVVKTGFSRDNLAFQVVKGQDKDKYL 220
[140][TOP]
>UniRef100_C9BJH6 ATP-dependent DNA helicase RecQ n=7 Tax=Enterococcus faecium
RepID=C9BJH6_ENTFC
Length = 590
Score = 65.9 bits (159), Expect = 2e-09
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Frame = +2
Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388
V ++ +DEAHCIS+W H+FRP+YL +A+ L P+ P ++ALTATA+V
Sbjct: 128 VRMIAIDEAHCISQWGHDFRPSYLQMANQLD-----------QLPNRPVIVALTATATVQ 176
Query: 389 TAAAITSALRTP--TVVASDVARTNLQLSIVR 478
AA I L+ P + + R NL+ +++
Sbjct: 177 VAADIKRLLKIPENNHIQTGFERENLRFQVIK 208
[141][TOP]
>UniRef100_C9BC97 ATP-dependent DNA helicase RecQ n=1 Tax=Enterococcus faecium
1,141,733 RepID=C9BC97_ENTFC
Length = 599
Score = 65.9 bits (159), Expect = 2e-09
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Frame = +2
Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388
V ++ +DEAHCIS+W H+FRP+YL +A L+ P+ P ++ALTATA++
Sbjct: 128 VCMIAIDEAHCISQWGHDFRPSYLQMAKQLN-----------QLPNRPVIVALTATATIQ 176
Query: 389 TAAAITSALRTP--TVVASDVARTNLQLSIVR 478
AA I L+ P + + R NL+ +V+
Sbjct: 177 VAADIKRLLKIPDGNHIQTGFERENLRFQVVK 208
[142][TOP]
>UniRef100_C9B624 ATP-dependent DNA helicase RecQ n=1 Tax=Enterococcus faecium
1,231,501 RepID=C9B624_ENTFC
Length = 590
Score = 65.9 bits (159), Expect = 2e-09
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Frame = +2
Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388
V ++ +DEAHCIS+W H+FRP+YL +A+ L P+ P ++ALTATA+V
Sbjct: 128 VRMIAIDEAHCISQWGHDFRPSYLQMANQLD-----------QLPNRPVIVALTATATVQ 176
Query: 389 TAAAITSALRTP--TVVASDVARTNLQLSIVR 478
AA I L+ P + + R NL+ +++
Sbjct: 177 VAADIKRLLKIPENNHIQTGFERENLRFQVIK 208
[143][TOP]
>UniRef100_C9AF45 ATP-dependent DNA helicase RecQ n=2 Tax=Enterococcus faecium
RepID=C9AF45_ENTFC
Length = 655
Score = 65.9 bits (159), Expect = 2e-09
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Frame = +2
Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388
V ++ +DEAHCIS+W H+FRP+YL +A L+ P+ P ++ALTATA++
Sbjct: 184 VCMIAIDEAHCISQWGHDFRPSYLQMAKQLN-----------QLPNRPVIVALTATATIQ 232
Query: 389 TAAAITSALRTP--TVVASDVARTNLQLSIVR 478
AA I L+ P + + R NL+ +V+
Sbjct: 233 VAADIKRLLKIPDGNHIQTGFERENLRFQVVK 264
[144][TOP]
>UniRef100_C8WPE9 ATP-dependent DNA helicase RecQ n=1 Tax=Eggerthella lenta DSM 2243
RepID=C8WPE9_9ACTN
Length = 681
Score = 65.9 bits (159), Expect = 2e-09
Identities = 47/157 (29%), Positives = 63/157 (40%), Gaps = 2/157 (1%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
R L+GA +++V+PERL RF F
Sbjct: 104 RALDGAYQIMYVAPERLADPRFLEF----------------------------------- 128
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
A R + LV +DEAHC+S+W +FRP+YL + D + P P V A TA
Sbjct: 129 AQRAAIPLVAVDEAHCVSQWGQDFRPSYLTIGDFI-----------AQLPSRPVVAAFTA 177
Query: 374 TASVATAAAITSA--LRTPTVVASDVARTNLQLSIVR 478
TA+ A I LR P V + R NL + R
Sbjct: 178 TATARVRADIVRLLDLRDPYEVVTGFDRPNLYFGVER 214
[145][TOP]
>UniRef100_C2ADA1 ATP-dependent DNA helicase RecQ n=1 Tax=Thermomonospora curvata DSM
43183 RepID=C2ADA1_THECU
Length = 706
Score = 65.9 bits (159), Expect = 2e-09
Identities = 57/176 (32%), Positives = 73/176 (41%), Gaps = 10/176 (5%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G VDVL VSPERL + F + G G
Sbjct: 118 GVVDVLLVSPERLNNPAFRDAVLPKLAAGAG----------------------------- 148
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS- 382
+VV+DEAHCIS+W H+FRP Y L L P G P VLA TATA+
Sbjct: 149 ---MVVVDEAHCISDWGHDFRPDYRRLRTLLADL-------PEGVP----VLATTATANA 194
Query: 383 ---------VATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
+A+ AA A P V+ + R +L L++VR PT + +L L L
Sbjct: 195 RVVQDVREQLASGAAAGPAGEVP-VLRGSLERASLHLAVVRLPTAEHRLAWLAERL 249
[146][TOP]
>UniRef100_C1UU04 ATP-dependent DNA helicase, RecQ family n=1 Tax=Haliangium
ochraceum DSM 14365 RepID=C1UU04_9DELT
Length = 646
Score = 65.9 bits (159), Expect = 2e-09
Identities = 55/173 (31%), Positives = 75/173 (43%), Gaps = 3/173 (1%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
RL EG + +V+PERL RF +R GGR
Sbjct: 121 RLSEGRPCIAYVTPERLGEPRFRKRLR------------------------------GGR 150
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
V L V+DEAHCIS+W H+FRPAYL L +A+ + P VLALTA
Sbjct: 151 -----VGLFVVDEAHCISQWGHDFRPAYLGLGEAVK------------ALGRPPVLALTA 193
Query: 374 TASVATAAAITSAL---RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
TA + I + L +++ + R NL + +A + K LLRL+
Sbjct: 194 TAPPRVKSDILAQLGMDEDASIIDVGLQRPNLNYHVFKAHSEHKKRQHLLRLI 246
[147][TOP]
>UniRef100_C0U7B1 ATP-dependent DNA helicase RecQ n=1 Tax=Geodermatophilus obscurus
DSM 43160 RepID=C0U7B1_9ACTO
Length = 741
Score = 65.9 bits (159), Expect = 2e-09
Identities = 53/164 (32%), Positives = 70/164 (42%), Gaps = 4/164 (2%)
Frame = +2
Query: 32 VDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRVPV 211
VDVL VSPERL + RF + G
Sbjct: 123 VDVLLVSPERLTNPRFREEQLPDLVARCG------------------------------- 151
Query: 212 SLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVAT 391
L+V+DEAHC+S+W H+FRP Y + D L P G+P VLA TATA+
Sbjct: 152 -LLVVDEAHCVSDWGHDFRPDYRRIRDLLGTLPA-------GTP----VLATTATANERV 199
Query: 392 AAAITSALRT----PTVVASDVARTNLQLSIVRAPTVDAKLPLL 511
A + L T V +AR +L+L ++R PT A+L L
Sbjct: 200 VADVAEQLGAGGVGVTTVRGPLARDSLRLGVLRLPTDRARLAWL 243
[148][TOP]
>UniRef100_Q9C6N0 ATP-dependent DNA helicase RecQ, putative n=1 Tax=Arabidopsis
thaliana RepID=Q9C6N0_ARATH
Length = 941
Score = 65.9 bits (159), Expect = 2e-09
Identities = 56/174 (32%), Positives = 74/174 (42%), Gaps = 21/174 (12%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
+L EG + VLFVSPERLL+ F S R
Sbjct: 353 KLKEGIIKVLFVSPERLLNVEFLSMFRMS------------------------------- 381
Query: 194 APRVPVSLVVLDEAHCISE-----------W--------SHNFRPAYLHLADALHGSPGS 316
+ VSLVV+DEAHC+SE W SHNFRP+Y+ L S
Sbjct: 382 ---LSVSLVVVDEAHCVSECIYCLSLFCLSWLLRAILNRSHNFRPSYMRL-------KAS 431
Query: 317 RLFPPRGSPHAPAVLALTATASVATAAAITSALRTPT--VVASDVARTNLQLSI 472
LF A +LA+TATA+ T A+ S+L P+ ++ R N +LS+
Sbjct: 432 MLF---SELKAECILAMTATATTMTLQAVMSSLEIPSTNLIQKSQLRDNFELSV 482
[149][TOP]
>UniRef100_C8NND3 ATP-dependent DNA helicase n=2 Tax=Corynebacterium efficiens
RepID=C8NND3_COREF
Length = 683
Score = 65.5 bits (158), Expect = 2e-09
Identities = 55/169 (32%), Positives = 75/169 (44%), Gaps = 3/169 (1%)
Frame = +2
Query: 2 RIEGRLLEGAVDVLFVSPERLLSERF--ASFMRAHAMTGGGGGRGDGTAATDDGDGGAGG 175
+I+ + GAVDVL +SPERL + F A R A TG
Sbjct: 106 QIQAEVTAGAVDVLLISPERLNNPDFRDAVLPRLAAETG--------------------- 144
Query: 176 DGPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPA 355
LVV+DEAHCIS+W H+FRP Y + D L G +P AP
Sbjct: 145 -------------LVVVDEAHCISDWGHDFRPDYRRIRDLLAGL----------APGAP- 180
Query: 356 VLALTATASVATAAAITSALRTPT-VVASDVARTNLQLSIVRAPTVDAK 499
VLA TATA+ + + L T ++ + R +L L++V P A+
Sbjct: 181 VLATTATANDRVVEDVRAQLGEDTGLLRGGLDRESLHLAVVNIPDSTAR 229
[150][TOP]
>UniRef100_Q03A98 ATP-dependent DNA helicase RecQ n=1 Tax=Lactobacillus casei ATCC
334 RepID=Q03A98_LACC3
Length = 592
Score = 65.5 bits (158), Expect = 2e-09
Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Frame = +2
Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388
+SL +DEAHCIS+W H+FRP+YL+LA+ ++L P P V+ALTATA+
Sbjct: 133 ISLFAIDEAHCISQWGHDFRPSYLNLANV-----AAQL------PSQPPVIALTATATPR 181
Query: 389 TAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I L P ++ + R+NL +VR D L L+L
Sbjct: 182 VAQDICQRLAIPADGMINTGFERSNLSFKVVRDQDEDRYLLDYLKL 227
[151][TOP]
>UniRef100_B3WD78 ATP-dependent DNA helicase RecQ n=1 Tax=Lactobacillus casei BL23
RepID=B3WD78_LACCB
Length = 592
Score = 65.5 bits (158), Expect = 2e-09
Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Frame = +2
Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388
+SL +DEAHCIS+W H+FRP+YL+LA+ ++L P P V+ALTATA+
Sbjct: 133 ISLFAIDEAHCISQWGHDFRPSYLNLANV-----AAQL------PSQPPVIALTATATPR 181
Query: 389 TAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I L P ++ + R+NL +VR D L L+L
Sbjct: 182 VAQDICQRLAIPADGMINTGFERSNLSFKVVRDQDEDRYLLDYLKL 227
[152][TOP]
>UniRef100_A7HXG7 ATP-dependent DNA helicase RecQ n=1 Tax=Parvibaculum
lavamentivorans DS-1 RepID=A7HXG7_PARL1
Length = 633
Score = 65.5 bits (158), Expect = 2e-09
Identities = 51/168 (30%), Positives = 72/168 (42%), Gaps = 2/168 (1%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
I L G +D+L+V+PERL S+ F SF+
Sbjct: 132 IREALTAGELDLLYVTPERLASDGFISFLA------------------------------ 161
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
RVP++L +DEAHCIS+W H+FRP YL L P PR LA
Sbjct: 162 -----RVPLALFAIDEAHCISQWGHDFRPEYLQLGRLKERFPD----VPR--------LA 204
Query: 365 LTATASVATAAAITSALR--TPTVVASDVARTNLQLSIVRAPTVDAKL 502
LTATA T + L+ + ++ R N++ +IVR ++L
Sbjct: 205 LTATADPQTRDDLVHRLQLDDARIFSASFDRPNIRYTIVRKDNAKSQL 252
[153][TOP]
>UniRef100_Q1N3I0 RecQ domain protein n=1 Tax=Bermanella marisrubri
RepID=Q1N3I0_9GAMM
Length = 658
Score = 65.5 bits (158), Expect = 2e-09
Identities = 49/165 (29%), Positives = 71/165 (43%), Gaps = 2/165 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G++ +L +S ER +ERF F++ V
Sbjct: 117 GSIKILMISVERFKNERFRQFIQT-----------------------------------V 141
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P+S++V+DEAHCISEW HNFRP YL L R + P L LTATA+
Sbjct: 142 PISMLVVDEAHCISEWGHNFRPDYLKLPSY------------RKDLNIPLTLLLTATATK 189
Query: 386 ATAAAITSA--LRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLL 514
A + ++ +V + R NL LS++ + KLP L+
Sbjct: 190 AVKRDMAEKFDIQPEHIVQTGFYRPNLDLSVLPVKQAE-KLPTLV 233
[154][TOP]
>UniRef100_C8UT24 DNA helicase RecQ n=1 Tax=Lactobacillus rhamnosus GG
RepID=C8UT24_LACRG
Length = 593
Score = 65.5 bits (158), Expect = 2e-09
Identities = 42/106 (39%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Frame = +2
Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388
+SL +DEAHCIS+W H+FRP+YL+LA+ ++L P P V+ALTATA+
Sbjct: 133 ISLFAIDEAHCISQWGHDFRPSYLNLANV-----AAQL------PSQPPVIALTATATPR 181
Query: 389 TAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I L P V+ + R NL +VR D L L+L
Sbjct: 182 VAQDICQRLMIPDDGVINTGFERDNLSFKVVRDQDEDRYLLDYLKL 227
[155][TOP]
>UniRef100_C7TIC6 ATP-dependent DNA helicase RecQ n=1 Tax=Lactobacillus rhamnosus Lc
705 RepID=C7TIC6_LACRL
Length = 591
Score = 65.5 bits (158), Expect = 2e-09
Identities = 42/106 (39%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Frame = +2
Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388
+SL +DEAHCIS+W H+FRP+YL+LA+ ++L P P V+ALTATA+
Sbjct: 131 ISLFAIDEAHCISQWGHDFRPSYLNLANV-----AAQL------PSQPPVIALTATATPR 179
Query: 389 TAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I L P V+ + R NL +VR D L L+L
Sbjct: 180 VAQDICQRLMIPDDGVINTGFERDNLSFKVVRDQDEDRYLLDYLKL 225
[156][TOP]
>UniRef100_C7TBF1 ATP-dependent DNA helicase RecQ n=1 Tax=Lactobacillus rhamnosus GG
RepID=C7TBF1_LACRG
Length = 591
Score = 65.5 bits (158), Expect = 2e-09
Identities = 42/106 (39%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Frame = +2
Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388
+SL +DEAHCIS+W H+FRP+YL+LA+ ++L P P V+ALTATA+
Sbjct: 131 ISLFAIDEAHCISQWGHDFRPSYLNLANV-----AAQL------PSQPPVIALTATATPR 179
Query: 389 TAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I L P V+ + R NL +VR D L L+L
Sbjct: 180 VAQDICQRLMIPDDGVINTGFERDNLSFKVVRDQDEDRYLLDYLKL 225
[157][TOP]
>UniRef100_C5F3C1 ATP-dependent DNA helicase RecQ n=1 Tax=Lactobacillus paracasei
subsp. paracasei 8700:2 RepID=C5F3C1_LACPA
Length = 592
Score = 65.5 bits (158), Expect = 2e-09
Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Frame = +2
Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388
+SL +DEAHCIS+W H+FRP+YL+LA+ ++L P P V+ALTATA+
Sbjct: 133 ISLFAIDEAHCISQWGHDFRPSYLNLANV-----AAQL------PSQPPVIALTATATPR 181
Query: 389 TAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I L P ++ + R+NL +VR D L L+L
Sbjct: 182 VAQDICQRLAIPADGMINTGFERSNLSFKVVRDQDEDRYLLDYLKL 227
[158][TOP]
>UniRef100_C2KGQ7 ATP-dependent helicase n=4 Tax=Lactobacillus crispatus
RepID=C2KGQ7_9LACO
Length = 589
Score = 65.5 bits (158), Expect = 2e-09
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Frame = +2
Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388
+ LV +DEAHCIS+W H+FRPAY L D ++ S SR P +LALTATA+ A
Sbjct: 130 IDLVAVDEAHCISQWGHDFRPAYRQLLDGIN-SLKSR----------PNILALTATATPA 178
Query: 389 TAAAITSALRTP--TVVASDVARTNLQLSIVRAP 484
I L P ++ + AR N+ +V +P
Sbjct: 179 VQDDICEQLNIPKENMIVTSFARPNISFKVVNSP 212
[159][TOP]
>UniRef100_C2JW62 ATP-dependent helicase n=1 Tax=Lactobacillus rhamnosus LMS2-1
RepID=C2JW62_LACRH
Length = 593
Score = 65.5 bits (158), Expect = 2e-09
Identities = 42/106 (39%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Frame = +2
Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388
+SL +DEAHCIS+W H+FRP+YL+LA+ ++L P P V+ALTATA+
Sbjct: 133 ISLFAIDEAHCISQWGHDFRPSYLNLANV-----AAQL------PSQPPVIALTATATPR 181
Query: 389 TAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I L P V+ + R NL +VR D L L+L
Sbjct: 182 VAQDICQRLMIPDDGVINTGFERDNLSFKVVRDQDEDRYLLDYLKL 227
[160][TOP]
>UniRef100_C2FGL8 ATP-dependent DNA helicase RecQ n=1 Tax=Lactobacillus paracasei
subsp. paracasei ATCC 25302 RepID=C2FGL8_LACPA
Length = 592
Score = 65.5 bits (158), Expect = 2e-09
Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Frame = +2
Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388
+SL +DEAHCIS+W H+FRP+YL+LA+ ++L P P V+ALTATA+
Sbjct: 133 ISLFAIDEAHCISQWGHDFRPSYLNLANV-----AAQL------PSQPPVIALTATATPR 181
Query: 389 TAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I L P ++ + R+NL +VR D L L+L
Sbjct: 182 VAQDICQRLAIPADGMINTGFERSNLSFKVVRDQDEDRYLLDYLKL 227
[161][TOP]
>UniRef100_B5QN93 Superfamily II DNA helicase n=1 Tax=Lactobacillus rhamnosus HN001
RepID=B5QN93_LACRH
Length = 593
Score = 65.5 bits (158), Expect = 2e-09
Identities = 42/106 (39%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Frame = +2
Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388
+SL +DEAHCIS+W H+FRP+YL+LA+ ++L P P V+ALTATA+
Sbjct: 133 ISLFAIDEAHCISQWGHDFRPSYLNLANV-----AAQL------PSQPPVIALTATATPR 181
Query: 389 TAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A I L P V+ + R NL +VR D L L+L
Sbjct: 182 VAQDICQRLMIPDDGVINTGFERDNLSFKVVRDQDEDRYLLDYLKL 227
[162][TOP]
>UniRef100_Q0VQD9 ATP-dependent DNA helicase RecQ n=1 Tax=Alcanivorax borkumensis SK2
RepID=Q0VQD9_ALCBS
Length = 636
Score = 65.1 bits (157), Expect = 3e-09
Identities = 55/171 (32%), Positives = 75/171 (43%), Gaps = 2/171 (1%)
Frame = +2
Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196
L +G++ +L+V+PERL +ERF + R
Sbjct: 102 LEDGSIKLLYVAPERLANERFLA-----------------------------------RL 126
Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376
R+ +S++ +DEAHC+SEW HNFRP YL LA R VLALTAT
Sbjct: 127 KRLSISMMAVDEAHCVSEWGHNFRPDYLKLAQLAKELEVGR------------VLALTAT 174
Query: 377 ASVATAAAI--TSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
A+ A I + A+ V + R NL LS VR V+ + LL L
Sbjct: 175 ATPQVAQQICDSFAIAPADHVQTGFFRPNLALS-VRPYNVEERGRALLEAL 224
[163][TOP]
>UniRef100_Q02X49 ATP-dependent DNA helicase RecQ n=1 Tax=Lactococcus lactis subsp.
cremoris SK11 RepID=Q02X49_LACLS
Length = 593
Score = 65.1 bits (157), Expect = 3e-09
Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 2/153 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + +LFV+PER + F +F++ ++
Sbjct: 104 GEIKLLFVAPERFSLDYFNNFLQ-----------------------------------KL 128
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P+ LV +DEAHCIS+W H+FRP+Y+ A L + P P VLALTATA+
Sbjct: 129 PIDLVAIDEAHCISQWGHDFRPSYVDFAAHL-----------KDLPTRPTVLALTATATP 177
Query: 386 ATAAAITSALR-TPT-VVASDVARTNLQLSIVR 478
A I S L +P+ + + R NL+ +V+
Sbjct: 178 KVADDIQSLLSISPSHTIKTGFLRENLRFEVVK 210
[164][TOP]
>UniRef100_A7HKC6 ATP-dependent DNA helicase, RecQ family n=1 Tax=Fervidobacterium
nodosum Rt17-B1 RepID=A7HKC6_FERNB
Length = 448
Score = 65.1 bits (157), Expect = 3e-09
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 9/183 (4%)
Frame = +2
Query: 2 RIEGRLLEGAVD----VLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGA 169
+I ++LE AV+ +L+++PER+ +E + ++
Sbjct: 101 KINKKILEDAVNGKYKILYIAPERIDNETWKKYL-------------------------- 134
Query: 170 GGDGPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHA 349
P + +S VV+DEAHCIS W H+FRP Y + + + R P +
Sbjct: 135 ---------PNLKISFVVVDEAHCISVWGHDFRPDYRKIREII-----------RAVPKS 174
Query: 350 PAVLALTATASVATAAAITSALRT-----PTVVASDVARTNLQLSIVRAPTVDAKLPLLL 514
VLA+TATA A I +++ +V +D+ R NL++ ++ + KL LL
Sbjct: 175 IPVLAVTATADDFIAEDIKEQMQSYIGEDIEIVRNDLFRENLRIRVIEVNGEEEKLAFLL 234
Query: 515 RLL 523
R L
Sbjct: 235 RYL 237
[165][TOP]
>UniRef100_A2RMM8 ATP-dependent DNA helicase RecQ n=1 Tax=Lactococcus lactis subsp.
cremoris MG1363 RepID=A2RMM8_LACLM
Length = 592
Score = 65.1 bits (157), Expect = 3e-09
Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 2/153 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + +LFV+PER + F +F++ ++
Sbjct: 104 GEIKLLFVAPERFSLDYFNNFLQ-----------------------------------KL 128
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P+ LV +DEAHCIS+W H+FRP+Y+ A L + P P VLALTATA+
Sbjct: 129 PIDLVAIDEAHCISQWGHDFRPSYVDFAAHL-----------KDLPTRPTVLALTATATP 177
Query: 386 ATAAAITSALR-TPT-VVASDVARTNLQLSIVR 478
A I S L +P+ + + R NL+ +V+
Sbjct: 178 KVADDIQSLLSISPSHTIKTGFLRENLRFEVVK 210
[166][TOP]
>UniRef100_Q1ZBG4 ATP-dependent DNA helicase, RecQ family protein (Fragment) n=1
Tax=Psychromonas sp. CNPT3 RepID=Q1ZBG4_9GAMM
Length = 313
Score = 65.1 bits (157), Expect = 3e-09
Identities = 50/165 (30%), Positives = 69/165 (41%), Gaps = 2/165 (1%)
Frame = +2
Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202
EG + +LF+S ERL SERF F++
Sbjct: 40 EGNIKILFISVERLNSERFRLFLKT----------------------------------- 64
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
+ +SL+V+DEAHCISEW HNFRP YL LA R + VL LTATA+
Sbjct: 65 IRISLLVVDEAHCISEWGHNFRPDYLKLAQY------------RKEFNIAQVLLLTATAT 112
Query: 383 VATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLL 511
A + S ++ + + R+NL L + D L+
Sbjct: 113 SKVIADMASKFSISPENITQTGSYRSNLNLDVQGVSEADKLTTLI 157
[167][TOP]
>UniRef100_C9ANX6 ATP-dependent DNA helicase RecQ n=1 Tax=Enterococcus faecium Com15
RepID=C9ANX6_ENTFC
Length = 590
Score = 65.1 bits (157), Expect = 3e-09
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Frame = +2
Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388
V ++ +DEAHCIS+W H+FRP+YL +A L P+ P ++ALTATA++
Sbjct: 128 VCMIAIDEAHCISQWGHDFRPSYLQMAKQLD-----------QLPNQPVIVALTATATIQ 176
Query: 389 TAAAITSALRTP--TVVASDVARTNLQLSIVR 478
AA I L+ P + + R NL+ +V+
Sbjct: 177 VAADIKRLLKIPDGNHIQTGFERENLRFQVVK 208
[168][TOP]
>UniRef100_C7PQ71 ATP-dependent DNA helicase, RecQ family n=1 Tax=Chitinophaga
pinensis DSM 2588 RepID=C7PQ71_CHIPD
Length = 634
Score = 65.1 bits (157), Expect = 3e-09
Identities = 58/174 (33%), Positives = 79/174 (45%), Gaps = 6/174 (3%)
Frame = +2
Query: 14 RLLE----GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181
RLLE G L+VSPERL S+RF + DG
Sbjct: 97 RLLEDARRGKYKFLYVSPERLQSKRFLEYC----------------------------DG 128
Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361
+PV+L+ +DEAHCIS+W ++FRPAYL +A A+ G FP G P VL
Sbjct: 129 -------MPVNLLAIDEAHCISQWGYDFRPAYLDIA-AIRG-----YFP--GVP----VL 169
Query: 362 ALTATASVATAAAITSAL--RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517
ALTA+A+ I L + + AR+NL S++ KL +L+
Sbjct: 170 ALTASATPEVQQDICEKLLMKRAAIFTKSFARSNLSYSVIEEDNKPEKLKHILQ 223
[169][TOP]
>UniRef100_B5JDJ9 ATP-dependent DNA helicase, RecQ family n=1 Tax=Verrucomicrobiae
bacterium DG1235 RepID=B5JDJ9_9BACT
Length = 640
Score = 65.1 bits (157), Expect = 3e-09
Identities = 52/167 (31%), Positives = 71/167 (42%), Gaps = 3/167 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
GA+ +L+V+PER+ +ERF + + HA
Sbjct: 110 GALKLLYVAPERISNERFFAAIEGHA---------------------------------- 135
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
+SL+V+DEAHCISEW HNFRP YL LA A R VLALTAT
Sbjct: 136 -ISLMVIDEAHCISEWGHNFRPEYLKLAIAAKALKVER------------VLALTAT--- 179
Query: 386 ATAAAITSALRTPTVVASDVARTNL---QLSIVRAPTVDAKLPLLLR 517
AT + LR + + T L + +PT ++ +LR
Sbjct: 180 ATPTVVEDILREFEIAPAGYVNTGFHRPNLFLAFSPTAASERMEILR 226
[170][TOP]
>UniRef100_UPI0001B5799F ATP-dependent DNA helicase RecQ n=1 Tax=Streptomyces sp. SPB78
RepID=UPI0001B5799F
Length = 568
Score = 64.7 bits (156), Expect = 4e-09
Identities = 54/164 (32%), Positives = 69/164 (42%), Gaps = 2/164 (1%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
R+ EGA+D LFVSPE+L A D GG GP
Sbjct: 112 RVREGALDFLFVSPEQL--------------------------AKPDVLAMVGGAGP--- 142
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
+L+V+DEAHC+S W H+FRP YL L R P +LALTA
Sbjct: 143 ------ALMVVDEAHCVSSWGHDFRPDYLALGRV------------RDRIGHPPLLALTA 184
Query: 374 TASVATAAAITSALRTPTV--VASDVARTNLQLSIVRAPTVDAK 499
+A+ A I LR P + S R + L +VR +AK
Sbjct: 185 SAAPPVRADILRHLRMPGAREIVSGFDRPEIHLEVVRHQDEEAK 228
[171][TOP]
>UniRef100_UPI0001555E87 PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus
anatinus RepID=UPI0001555E87
Length = 327
Score = 64.7 bits (156), Expect = 4e-09
Identities = 53/171 (30%), Positives = 72/171 (42%), Gaps = 2/171 (1%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
+ R G + +L +S ERL +ERF +F+ +
Sbjct: 95 VMARARSGELKILMISVERLKNERFRNFLNS----------------------------- 125
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
V +SL+V+DEAHCISEW HNFRP YL L D R F + P L
Sbjct: 126 ------VQISLLVVDEAHCISEWGHNFRPDYLKLPDY------QRQF------NIPQALL 167
Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLL 511
LTATA+ A + + A+ VV + R NL L + D + LL
Sbjct: 168 LTATATPQVIADMQAKFAIAAEDVVTTGFYRPNLNLLVEPVSGHDKRRRLL 218
[172][TOP]
>UniRef100_Q8PHX4 DNA helicase n=1 Tax=Xanthomonas axonopodis pv. citri
RepID=Q8PHX4_XANAC
Length = 598
Score = 64.7 bits (156), Expect = 4e-09
Identities = 49/161 (30%), Positives = 69/161 (42%), Gaps = 2/161 (1%)
Frame = +2
Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181
R+E LL G +D+L+V+PERLL++RF S +
Sbjct: 98 RVERALLSGDLDLLYVAPERLLTQRFLSLLE----------------------------- 128
Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361
R ++L +DEAHC+S+W H+FRP Y L LH PH P +
Sbjct: 129 ------RSRIALFAIDEAHCVSQWGHDFRPEYRQLT-VLH----------ERWPHVPR-M 170
Query: 362 ALTATASVATAAAITSALRTPTV--VASDVARTNLQLSIVR 478
ALTATA T I L S R N++ ++V+
Sbjct: 171 ALTATADPPTQREIAERLDLVDARHFVSSFDRPNIRYTVVQ 211
[173][TOP]
>UniRef100_A6AZD9 DNA helicase n=2 Tax=Vibrio parahaemolyticus RepID=A6AZD9_VIBPA
Length = 641
Score = 64.7 bits (156), Expect = 4e-09
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + +L +S ERL +ERF F+R +V
Sbjct: 107 GEIKILMISVERLKNERFREFIR-----------------------------------QV 131
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P+SL+V+DEAHCISEW HNFRP YL L + + P L LTATA+
Sbjct: 132 PISLMVVDEAHCISEWGHNFRPDYLKLPQY------------QRELNIPQTLLLTATATP 179
Query: 386 ATAAAITSA--LRTPTVVASDVARTNLQLSIV 475
A + + + + + + R+NL +S++
Sbjct: 180 AVIEDMKNKFDIASDHITVTGFYRSNLDISVI 211
[174][TOP]
>UniRef100_Q7ULP2 ATP-dependent DNA helicase RecQ n=1 Tax=Rhodopirellula baltica
RepID=Q7ULP2_RHOBA
Length = 662
Score = 64.7 bits (156), Expect = 4e-09
Identities = 51/171 (29%), Positives = 69/171 (40%), Gaps = 2/171 (1%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
R+ G +L+VSPER +ERF + +
Sbjct: 122 RVRSGHCKLLYVSPERFFNERFRAVLG--------------------------------- 148
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
P+S++ +DEAHC+SEW H+FRP YL L D + P VLALTA
Sbjct: 149 --ETPISMLAVDEAHCMSEWGHHFRPDYLRLPDVVE------------EHSIPQVLALTA 194
Query: 374 TASVATAAAITSA--LRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
TA I SA L VV R+NL L + + + LL +L
Sbjct: 195 TAPQRVVREIRSAFGLERTDVVKVPTHRSNLHLQCTQVTSRERDERLLEQL 245
[175][TOP]
>UniRef100_Q6N0D7 DNA helicase n=1 Tax=Rhodopseudomonas palustris RepID=Q6N0D7_RHOPA
Length = 616
Score = 64.7 bits (156), Expect = 4e-09
Identities = 51/168 (30%), Positives = 71/168 (42%), Gaps = 2/168 (1%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
IE +LL+G +D+L+V+PERLL+ R S +
Sbjct: 111 IEQQLLKGELDLLYVAPERLLTPRCLSLLA------------------------------ 140
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
R +SL +DEAHC+S+W H+FRP Y+ L+ P PR +A
Sbjct: 141 -----RAKISLFAIDEAHCVSQWGHDFRPEYVGLSAIAEKFPN----VPR--------IA 183
Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKL 502
LTATA T I +L S R N++ SIV A+L
Sbjct: 184 LTATADALTRREIAERLSLTDAPCFVSSFDRPNIRYSIVDKQNAPAQL 231
[176][TOP]
>UniRef100_Q3BQH7 DNA helicase n=1 Tax=Xanthomonas campestris pv. vesicatoria str.
85-10 RepID=Q3BQH7_XANC5
Length = 598
Score = 64.7 bits (156), Expect = 4e-09
Identities = 50/169 (29%), Positives = 72/169 (42%), Gaps = 2/169 (1%)
Frame = +2
Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181
R+E LL G +D+L+V+PERLL++RF S +
Sbjct: 98 RVERALLSGDLDLLYVAPERLLTQRFLSLLE----------------------------- 128
Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361
R ++L +DEAHC+S+W H+FRP Y L LH PH P +
Sbjct: 129 ------RSRIALFAIDEAHCVSQWGHDFRPEYRQLT-VLH----------ERWPHIPR-M 170
Query: 362 ALTATASVATAAAITSALRTPTV--VASDVARTNLQLSIVRAPTVDAKL 502
ALTATA T I L S R N++ ++V+ + +L
Sbjct: 171 ALTATADPPTQREIAERLDLVDARHFVSSFDRPNIRYTVVQKDSARKQL 219
[177][TOP]
>UniRef100_Q12ZW1 ATP-dependent DNA helicase RecQ n=1 Tax=Rhodopseudomonas palustris
BisB5 RepID=Q12ZW1_RHOPS
Length = 619
Score = 64.7 bits (156), Expect = 4e-09
Identities = 53/169 (31%), Positives = 73/169 (43%), Gaps = 3/169 (1%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
IE +LL G +D+L+V+PERLL+ R S +
Sbjct: 110 IERQLLSGELDLLYVAPERLLTPRCLSMLA------------------------------ 139
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
R +SL +DEAHC+S+W H+FRP Y+ L+ P PR +A
Sbjct: 140 -----RAKLSLFAIDEAHCVSQWGHDFRPEYVGLSAIAEKFPN----VPR--------IA 182
Query: 365 LTATASVATAAAITSAL---RTPTVVASDVARTNLQLSIVRAPTVDAKL 502
LTATA T IT L P V+S R N++ +IV A+L
Sbjct: 183 LTATADALTRREITERLGLTEAPCFVSS-FDRPNIRYTIVDKQNAPAQL 230
[178][TOP]
>UniRef100_B3QWV9 ATP-dependent DNA helicase, RecQ family n=1 Tax=Chloroherpeton
thalassium ATCC 35110 RepID=B3QWV9_CHLT3
Length = 594
Score = 64.7 bits (156), Expect = 4e-09
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 2/169 (1%)
Frame = +2
Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196
+ + + +LF++PERL +E F S MR
Sbjct: 119 IYQNRLKLLFIAPERLQNEGFLSDMR---------------------------------- 144
Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376
+ +SLV +DEAHCISEW ++FRP+Y +A L +L P+ P +LALTAT
Sbjct: 145 -QAKISLVAVDEAHCISEWGYDFRPSYQQIASQL------KLIYPK---TRPVMLALTAT 194
Query: 377 AS--VATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517
A+ + A + AL+ P + R +L LS+ + K+ +L+
Sbjct: 195 ATEEILKDIAKSLALKNPFIYIGGFERASLSLSVFQLENKREKVLQILK 243
[179][TOP]
>UniRef100_B3QDD9 ATP-dependent DNA helicase RecQ n=1 Tax=Rhodopseudomonas palustris
TIE-1 RepID=B3QDD9_RHOPT
Length = 616
Score = 64.7 bits (156), Expect = 4e-09
Identities = 51/168 (30%), Positives = 71/168 (42%), Gaps = 2/168 (1%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
IE +LL+G +D+L+V+PERLL+ R S +
Sbjct: 111 IEQQLLKGELDLLYVAPERLLTPRCLSLLA------------------------------ 140
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
R +SL +DEAHC+S+W H+FRP Y+ L+ P PR +A
Sbjct: 141 -----RAKISLFAIDEAHCVSQWGHDFRPEYVGLSAIAEKFPN----VPR--------IA 183
Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKL 502
LTATA T I +L S R N++ SIV A+L
Sbjct: 184 LTATADALTRREIAERLSLTDAPCFVSSFDRPNIRYSIVDKQNAPAQL 231
[180][TOP]
>UniRef100_A4XP76 ATP-dependent DNA helicase RecQ n=1 Tax=Pseudomonas mendocina ymp
RepID=A4XP76_PSEMY
Length = 642
Score = 64.7 bits (156), Expect = 4e-09
Identities = 52/162 (32%), Positives = 69/162 (42%), Gaps = 2/162 (1%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
+ R G + +L +S ERL +ERF +F+
Sbjct: 94 VMNRARSGELKILMISVERLKNERFRNFIA------------------------------ 123
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
+VP+SL+V+DEAHCISEW HNFRP YL L D R F + VL
Sbjct: 124 -----QVPISLLVVDEAHCISEWGHNFRPDYLKLPDY------QRQFGIK------QVLL 166
Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAP 484
LTATA+ A + A+ VV + R NL L + P
Sbjct: 167 LTATATPRVIADMREKFAIAEADVVTTGFYRPNLNLLVEPVP 208
[181][TOP]
>UniRef100_C8VVA7 ATP-dependent DNA helicase, RecQ family n=2 Tax=Desulfotomaculum
acetoxidans DSM 771 RepID=C8VVA7_9FIRM
Length = 793
Score = 64.7 bits (156), Expect = 4e-09
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Frame = +2
Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379
R+ + L+V+DEAHC+S+W H+FRP YL++ D + + P +LALTATA
Sbjct: 128 RIKLDLLVIDEAHCLSQWGHDFRPDYLNIKDFY-----------QNLNYRPTILALTATA 176
Query: 380 SVATAAAITSALRTP--TVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
+ I L P ++ S R NL + I+R KLP L L
Sbjct: 177 TPMVQQDILHYLDIPRAKLINSGSDRPNLYMEIIRVDKEKDKLPALRETL 226
[182][TOP]
>UniRef100_Q043J3 ATP-dependent DNA helicase RecQ n=2 Tax=Lactobacillus gasseri
RepID=Q043J3_LACGA
Length = 597
Score = 64.7 bits (156), Expect = 4e-09
Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Frame = +2
Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388
VSLV +DEAHCIS+W H+FRPAY + D + + P +LALTATA+ +
Sbjct: 130 VSLVAVDEAHCISQWGHDFRPAYRQIMDGVKSIKSN-----------PNILALTATATPS 178
Query: 389 TAAAITSALRTPTV--VASDVARTNLQLSIVRAP 484
I L+ P+ V + AR NL +V P
Sbjct: 179 VQKDIADQLQIPSANYVITSFARPNLSFKVVDNP 212
[183][TOP]
>UniRef100_B5W779 ATP-dependent DNA helicase RecQ n=1 Tax=Arthrospira maxima CS-328
RepID=B5W779_SPIMA
Length = 739
Score = 64.7 bits (156), Expect = 4e-09
Identities = 52/175 (29%), Positives = 78/175 (44%), Gaps = 3/175 (1%)
Frame = +2
Query: 8 EGRLLEGAVDVLFVSPERLLSERFASFM-RAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
E +L+G + +L+V+PERLLS +F F+ R A G
Sbjct: 109 ESAILQGQIKLLYVAPERLLSPQFLEFLDRLEAAFG------------------------ 144
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
+S +V+DEAHC+S+W H+FRP Y + SR PH PA+ A
Sbjct: 145 --------ISTLVIDEAHCVSDWGHDFRPEYRQIQQV-----RSRY------PHVPAI-A 184
Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
LTATA+ I L+ P V + R+NL ++ + P LL+++
Sbjct: 185 LTATATERVRFDIIKQIVLKQPYVHVASFYRSNLYYQVI-PKQPKKRFPQLLKVI 238
[184][TOP]
>UniRef100_UPI000179690F PREDICTED: similar to ATP-dependent DNA helicase Q4 (RecQ
protein-like 4) (RecQ4) (RTS), partial n=1 Tax=Equus
caballus RepID=UPI000179690F
Length = 1145
Score = 64.3 bits (155), Expect = 5e-09
Identities = 45/126 (35%), Positives = 57/126 (45%), Gaps = 8/126 (6%)
Frame = +2
Query: 164 GAGGDGPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSP 343
GAG GP PV+ +DEAHC+S+WSHNFRP YL + L G F
Sbjct: 521 GAGEGGPACLTQLPPVAFACIDEAHCLSQWSHNFRPCYLRVCKVLRERMGVHCF------ 574
Query: 344 HAPAVLALTATASVATA--------AAITSALRTPTVVASDVARTNLQLSIVRAPTVDAK 499
L LTATA+ +TA A + LR P + + NL LS+ D
Sbjct: 575 -----LGLTATATRSTARDVAWHLGVAEEAVLRGPVTIPA-----NLHLSVSMDRDPDQA 624
Query: 500 LPLLLR 517
L LL+
Sbjct: 625 LVTLLQ 630
[185][TOP]
>UniRef100_UPI0001693854 DNA helicase n=1 Tax=Xanthomonas oryzae pv. oryzicola BLS256
RepID=UPI0001693854
Length = 598
Score = 64.3 bits (155), Expect = 5e-09
Identities = 49/161 (30%), Positives = 69/161 (42%), Gaps = 2/161 (1%)
Frame = +2
Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181
R+E LL G +D+L+V+PERLL++RF S +
Sbjct: 98 RVERALLSGDLDLLYVAPERLLTQRFLSLLE----------------------------- 128
Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361
R ++L +DEAHC+S+W H+FRP Y L LH PH P +
Sbjct: 129 ------RSRIALFAIDEAHCVSQWGHDFRPEYRQLT-VLH----------ERWPHIPR-M 170
Query: 362 ALTATASVATAAAITSALRTPTV--VASDVARTNLQLSIVR 478
ALTATA T I L S R N++ ++V+
Sbjct: 171 ALTATADPPTQREIAERLDLVDARHFVSSFDRPNIRYTVVQ 211
[186][TOP]
>UniRef100_UPI00016929C1 ATP-dependent DNA helicase RecQ n=1 Tax=Paenibacillus larvae subsp.
larvae BRL-230010 RepID=UPI00016929C1
Length = 529
Score = 64.3 bits (155), Expect = 5e-09
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 2/157 (1%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
R ++G + +L+++PERL SERF S M+
Sbjct: 141 RAMQGKIKLLYIAPERLESERFRSLMQG-------------------------------- 168
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
+ VS + +DEAHC+S+W H+FRP+Y + + G R P V A TA
Sbjct: 169 ---LEVSFIAVDEAHCVSQWGHDFRPSYRAITPFI-GQLRRR----------PLVAAFTA 214
Query: 374 TASVATAAAITSA--LRTPTVVASDVARTNLQLSIVR 478
TA+ I L+ P + + AR NL L+I+R
Sbjct: 215 TATNEVTQDIAGLLDLKRPAIHINGFARNNLSLNILR 251
[187][TOP]
>UniRef100_Q8Z093 ATP-dependent DNA helicase n=1 Tax=Nostoc sp. PCC 7120
RepID=Q8Z093_ANASP
Length = 718
Score = 64.3 bits (155), Expect = 5e-09
Identities = 49/157 (31%), Positives = 68/157 (43%), Gaps = 2/157 (1%)
Frame = +2
Query: 8 EGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPG 187
E +L G V +L+V+PERLLSERF F+
Sbjct: 102 EEAILNGKVRLLYVAPERLLSERFLPFLDLVK---------------------------- 133
Query: 188 GRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLAL 367
+V +S+ +DEAHC+SEW H+FRP Y L + P+ P VLAL
Sbjct: 134 ---EKVGISIFAIDEAHCVSEWGHDFRPEYRQLKSL-----------RKRYPNVP-VLAL 178
Query: 368 TATASVATAAAITS--ALRTPTVVASDVARTNLQLSI 472
TATA+ A I L+ P++ + R NL +
Sbjct: 179 TATATDRVRADIIQQLGLKQPSIHLASFNRQNLYYEV 215
[188][TOP]
>UniRef100_Q7MTV2 ATP-dependent DNA helicase RecQ n=1 Tax=Porphyromonas gingivalis
RepID=Q7MTV2_PORGI
Length = 655
Score = 64.3 bits (155), Expect = 5e-09
Identities = 58/164 (35%), Positives = 69/164 (42%), Gaps = 2/164 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G L+VSPERL SE F S R HA+
Sbjct: 118 GRYKFLYVSPERLGSELFLS--RLHALR-------------------------------- 143
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
VSL+V+DE HCIS+W ++FRPAYL +AD P VLALTATA+
Sbjct: 144 -VSLLVVDECHCISQWGYDFRPAYLSIADIREALPD------------VPVLALTATATR 190
Query: 386 ATAAAITSALR--TPTVVASDVARTNLQLSIVRAPTVDAKLPLL 511
I LR P V+ R NL SI R T D + LL
Sbjct: 191 PVIDDIQRILRFPEPNVLRKSFFRPNLSYSIRR--TADKETMLL 232
[189][TOP]
>UniRef100_Q0K608 ATP-dependent DNA helicase n=1 Tax=Ralstonia eutropha H16
RepID=Q0K608_RALEH
Length = 615
Score = 64.3 bits (155), Expect = 5e-09
Identities = 48/159 (30%), Positives = 68/159 (42%), Gaps = 2/159 (1%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
+E LL G +++L+V+PERL++ RF +
Sbjct: 102 VERDLLAGRIEILYVAPERLMTPRFQDLLE------------------------------ 131
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
R+ V L +DEAHC+S+W H+FRP Y+ L+ LH P+ P + A
Sbjct: 132 -----RIRVGLFAIDEAHCVSQWGHDFRPEYIQLS-VLH----------ERFPYVPRI-A 174
Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIV 475
LTATA T I AL V S R N++ IV
Sbjct: 175 LTATADALTRNEIIERLALDNARVFISSFDRPNIRYRIV 213
[190][TOP]
>UniRef100_C6BFV9 ATP-dependent DNA helicase RecQ n=1 Tax=Ralstonia pickettii 12D
RepID=C6BFV9_RALP1
Length = 636
Score = 64.3 bits (155), Expect = 5e-09
Identities = 49/174 (28%), Positives = 73/174 (41%), Gaps = 2/174 (1%)
Frame = +2
Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181
++E L G +D+++V+PERL++ RF +
Sbjct: 119 QVERDLAAGRLDLVYVAPERLMTPRFLELLE----------------------------- 149
Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361
R + L +DEAHC+S+W H+FRP Y+ L+ LH PH P +
Sbjct: 150 ------RSRIGLFAIDEAHCVSQWGHDFRPEYIQLS-VLH----------ERFPHVPRI- 191
Query: 362 ALTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517
ALTATA T I AL V S R N++ +IV + +L +R
Sbjct: 192 ALTATADAVTRDEIVERLALTDARVFLSSFDRPNIRYTIVEKDSARQQLLRFIR 245
[191][TOP]
>UniRef100_C3K4K1 Putative ATP-dependent DNA helicase n=1 Tax=Pseudomonas fluorescens
SBW25 RepID=C3K4K1_PSEFS
Length = 647
Score = 64.3 bits (155), Expect = 5e-09
Identities = 50/158 (31%), Positives = 69/158 (43%), Gaps = 2/158 (1%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
+ R G + +L +S ERL +ERF +F+++
Sbjct: 95 VMARARSGELKILMISVERLKNERFRNFLQS----------------------------- 125
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
V +SL+V+DEAHCISEW HNFRP YL L D R F + P L
Sbjct: 126 ------VQISLLVVDEAHCISEWGHNFRPDYLKLPDY------QRQF------NIPQALL 167
Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQLSI 472
LTATA+ A + + A+ VV + R NL L +
Sbjct: 168 LTATATPKVIADMQAKFAIAPDDVVTTGFYRPNLNLLV 205
[192][TOP]
>UniRef100_B2SSX4 ATP-dependent DNA helicase RecQ n=3 Tax=Xanthomonas oryzae pv.
oryzae RepID=B2SSX4_XANOP
Length = 598
Score = 64.3 bits (155), Expect = 5e-09
Identities = 49/161 (30%), Positives = 69/161 (42%), Gaps = 2/161 (1%)
Frame = +2
Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181
R+E LL G +D+L+V+PERLL++RF S +
Sbjct: 98 RVERALLSGDLDLLYVAPERLLTQRFLSLLE----------------------------- 128
Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361
R ++L +DEAHC+S+W H+FRP Y L LH PH P +
Sbjct: 129 ------RSRIALFAIDEAHCVSQWGHDFRPEYRQLT-VLH----------ERWPHIPR-M 170
Query: 362 ALTATASVATAAAITSALRTPTV--VASDVARTNLQLSIVR 478
ALTATA T I L S R N++ ++V+
Sbjct: 171 ALTATADPPTQREIAERLDLVDARHFVSSFDRPNIRYTVVQ 211
[193][TOP]
>UniRef100_A7Z652 RecQ n=1 Tax=Bacillus amyloliquefaciens FZB42 RepID=A7Z652_BACA2
Length = 496
Score = 64.3 bits (155), Expect = 5e-09
Identities = 37/75 (49%), Positives = 43/75 (57%)
Frame = +2
Query: 191 RAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALT 370
R VPVSL V+DEAHCISEW H+FRP Y S+L P R + P VLALT
Sbjct: 124 RLKNVPVSLFVIDEAHCISEWGHDFRPDY------------SKLGPFRQALGKPPVLALT 171
Query: 371 ATASVATAAAITSAL 415
ATA+ T +T L
Sbjct: 172 ATATKETLRDVTDVL 186
[194][TOP]
>UniRef100_A7N1V1 Putative uncharacterized protein n=1 Tax=Vibrio harveyi ATCC
BAA-1116 RepID=A7N1V1_VIBHB
Length = 641
Score = 64.3 bits (155), Expect = 5e-09
Identities = 46/152 (30%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + +L +S ERL +ERF F+R ++
Sbjct: 107 GHIKILMISVERLKNERFREFIR-----------------------------------QI 131
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P+SL+V+DEAHCISEW HNFRP YL L + + P L LTATA+
Sbjct: 132 PLSLMVVDEAHCISEWGHNFRPDYLKLPQY------------QRELNIPQTLLLTATATP 179
Query: 386 ATAAAITSA--LRTPTVVASDVARTNLQLSIV 475
A + S + + + R+NL +S+V
Sbjct: 180 AVIEDMQSKFDIAGENITVTGFYRSNLDISVV 211
[195][TOP]
>UniRef100_A1BCJ6 ATP-dependent DNA helicase RecQ n=1 Tax=Chlorobium phaeobacteroides
DSM 266 RepID=A1BCJ6_CHLPD
Length = 619
Score = 64.3 bits (155), Expect = 5e-09
Identities = 52/169 (30%), Positives = 71/169 (42%), Gaps = 2/169 (1%)
Frame = +2
Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196
LL ++D+L+V+PER ++F ++
Sbjct: 117 LLSNSLDLLYVAPERFTLDQFQEMLK---------------------------------- 142
Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376
RV +S+ V+DEAHCISEW H+FRP YL L+ + LFP V A TAT
Sbjct: 143 -RVNISMAVIDEAHCISEWGHDFRPDYLSLSQLV------TLFPDL------PVAAFTAT 189
Query: 377 ASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517
A+ I ALR P VV + R NL I +L LL+
Sbjct: 190 ATHQVQRDILDKLALRNPFVVRASFDRANLYYDIRFKENASDQLVALLK 238
[196][TOP]
>UniRef100_C8PT51 ATP-dependent DNA helicase RecQ n=1 Tax=Treponema vincentii ATCC
35580 RepID=C8PT51_9SPIO
Length = 650
Score = 64.3 bits (155), Expect = 5e-09
Identities = 47/155 (30%), Positives = 66/155 (42%), Gaps = 2/155 (1%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
R+ G+V ++++SPE L +ER S + +
Sbjct: 119 RIKSGSVKLVYLSPEALAAERTQSILHDAS------------------------------ 148
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
VPVS + +DEAHCISEW H+FRP YL +++ R LALTA
Sbjct: 149 ---VPVSCITIDEAHCISEWGHDFRPGYLEISNV------------RAQFSGAVCLALTA 193
Query: 374 TASVATAAAITSALR--TPTVVASDVARTNLQLSI 472
TA+ A IT LR P V + R N+ L +
Sbjct: 194 TATAQVRADITVNLRMQAPEVFIAGFNRPNIFLEV 228
[197][TOP]
>UniRef100_C7RL39 ATP-dependent DNA helicase RecQ n=1 Tax=Candidatus Accumulibacter
phosphatis clade IIA str. UW-1 RepID=C7RL39_9PROT
Length = 604
Score = 64.3 bits (155), Expect = 5e-09
Identities = 48/158 (30%), Positives = 69/158 (43%), Gaps = 2/158 (1%)
Frame = +2
Query: 8 EGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPG 187
E RL G +D+++V+PERLL++RF +
Sbjct: 100 ERRLQAGELDLIYVAPERLLTDRFIGLLEQ------------------------------ 129
Query: 188 GRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLAL 367
R VSL +DEAHC+S+W H+FRP Y+ L+ PG PR +AL
Sbjct: 130 -LIARDQVSLFAIDEAHCVSQWGHDFRPEYIQLSQLHERFPGI----PR--------IAL 176
Query: 368 TATASVATAAAITS--ALRTPTVVASDVARTNLQLSIV 475
TATA T I S +L + + R N++ +IV
Sbjct: 177 TATADQLTRQEIVSRLSLEDARLFVASFDRPNIRYTIV 214
[198][TOP]
>UniRef100_B9ATT5 Putative uncharacterized protein n=1 Tax=Bifidobacterium breve DSM
20213 RepID=B9ATT5_BIFBR
Length = 700
Score = 64.3 bits (155), Expect = 5e-09
Identities = 46/156 (29%), Positives = 64/156 (41%), Gaps = 2/156 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + +L+V+PERL + RF F A R
Sbjct: 169 GQLKLLYVAPERLETGRFRDF-----------------------------------AART 193
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P+SL+ +DEAHC+S+W +FR +YL + D + G P P V A TATA+
Sbjct: 194 PISLIAVDEAHCVSQWGQDFRSSYLGIGDFI-----------VGLPKRPPVGAFTATATE 242
Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPT 487
I LR P V + R NL +V+ T
Sbjct: 243 RVRRDIVGLLGLRNPAVTVTGFDRPNLYFDVVKLET 278
[199][TOP]
>UniRef100_A8TBP0 Putative ATP-dependent DNA helicase RecQ (Fragment) n=1 Tax=Vibrio
sp. AND4 RepID=A8TBP0_9VIBR
Length = 488
Score = 64.3 bits (155), Expect = 5e-09
Identities = 48/152 (31%), Positives = 65/152 (42%), Gaps = 2/152 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + VL +S ERL +ERF F+R ++
Sbjct: 107 GQIKVLMISVERLKNERFREFIR-----------------------------------QI 131
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P+SL+V+DEAHCISEW HNFRP YL L + + P L LTATA+
Sbjct: 132 PLSLMVVDEAHCISEWGHNFRPDYLKLPQY------------QRELNIPQTLLLTATATP 179
Query: 386 ATAAAITSA--LRTPTVVASDVARTNLQLSIV 475
A + S + + + R NL LS+V
Sbjct: 180 AVIEDMQSKFNIAHENITVTGFYRPNLDLSMV 211
[200][TOP]
>UniRef100_A7BWU5 ATP-dependent DNA helicase RecQ n=1 Tax=Beggiatoa sp. PS
RepID=A7BWU5_9GAMM
Length = 700
Score = 64.3 bits (155), Expect = 5e-09
Identities = 51/174 (29%), Positives = 74/174 (42%), Gaps = 1/174 (0%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
I G+LL VD+L +SPERL +++F M
Sbjct: 108 IRGQLLRNTVDILLISPERLANDQFRENMLLPVADS------------------------ 143
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
+ L V+DEAHCIS+W H+FRP Y + + P P+ P VLA
Sbjct: 144 --------IGLFVVDEAHCISDWGHDFRPDYRRIKRIVQALP----------PNIP-VLA 184
Query: 365 LTATASVATAAAITSAL-RTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
TATA+ A I L + ++ + RT+LQL + P+ A++ L L
Sbjct: 185 TTATANDRVIADIQMQLGQNIHLLRGPLTRTSLQLQNIYLPSQAARMAWLAEQL 238
[201][TOP]
>UniRef100_A6ARC5 DNA helicase n=1 Tax=Vibrio harveyi HY01 RepID=A6ARC5_VIBHA
Length = 641
Score = 64.3 bits (155), Expect = 5e-09
Identities = 46/152 (30%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + +L +S ERL +ERF F+R ++
Sbjct: 107 GHIKILMISVERLKNERFREFIR-----------------------------------QI 131
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P+SL+V+DEAHCISEW HNFRP YL L + + P L LTATA+
Sbjct: 132 PLSLMVVDEAHCISEWGHNFRPDYLKLPQY------------QRELNIPQTLLLTATATP 179
Query: 386 ATAAAITSA--LRTPTVVASDVARTNLQLSIV 475
A + S + + + R+NL +S+V
Sbjct: 180 AVIKDMQSKFDIAGENITVTGFYRSNLDISVV 211
[202][TOP]
>UniRef100_Q74ER2 ATP-dependent DNA helicase RecQ n=1 Tax=Geobacter sulfurreducens
RepID=Q74ER2_GEOSL
Length = 603
Score = 63.9 bits (154), Expect = 6e-09
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 2/160 (1%)
Frame = +2
Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181
R+ RL G +D+L+V+PERL+++ F +R
Sbjct: 98 RVLARLHGGELDLLYVAPERLMTDAFLERLR----------------------------- 128
Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361
+P++L +DEAHC+S+W H+FRP Y+ L L G LFP ++
Sbjct: 129 ------EIPIALFAIDEAHCVSQWGHDFRPEYVELG-RLRG-----LFP------TVPMI 170
Query: 362 ALTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIV 475
ALTATA T I + LR + + R N++ S++
Sbjct: 171 ALTATADAQTRGDIVTRLGLRDAEMFVTGFDRPNIRYSVL 210
[203][TOP]
>UniRef100_Q6LK00 Putative putative ATP-dependent DNA helicase RecQ n=1
Tax=Photobacterium profundum RepID=Q6LK00_PHOPR
Length = 641
Score = 63.9 bits (154), Expect = 6e-09
Identities = 54/168 (32%), Positives = 72/168 (42%), Gaps = 2/168 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G VL +S ERL +ERF F+ +V
Sbjct: 103 GETKVLMISVERLKNERFRQFIS-----------------------------------QV 127
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA-- 379
VSL+V+DEAHCISEW HNFRP YL L R + P VL LTATA
Sbjct: 128 QVSLLVVDEAHCISEWGHNFRPDYLKLPYY------------RQLLNIPQVLLLTATATP 175
Query: 380 SVATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
+V + + ++ + R NL L+I+ A + KLP L ++L
Sbjct: 176 NVIQDMSTKFGIAEQDIIVTGFYRPNLDLTILAAED-ENKLPTLYKVL 222
[204][TOP]
>UniRef100_Q5DYC0 ATP-dependent DNA helicase RecQ n=1 Tax=Vibrio fischeri ES114
RepID=Q5DYC0_VIBF1
Length = 638
Score = 63.9 bits (154), Expect = 6e-09
Identities = 46/152 (30%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + +L +S ERL +ERF F+ ++
Sbjct: 103 GEIKILMISVERLKNERFRQFIA-----------------------------------QI 127
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
+SL+V+DEAHCISEW HNFRP YL L R + + P VL LTATA+
Sbjct: 128 NISLLVVDEAHCISEWGHNFRPDYLKLPQ------------DREALNIPQVLLLTATATP 175
Query: 386 ATAAAITSA--LRTPTVVASDVARTNLQLSIV 475
A ++ + +V + R+NL +SI+
Sbjct: 176 AVIEDMSKKFDIAQDDIVITGFYRSNLDISII 207
[205][TOP]
>UniRef100_Q3KJN7 Putative ATP-dependent DNA helicase n=1 Tax=Pseudomonas fluorescens
Pf0-1 RepID=Q3KJN7_PSEPF
Length = 642
Score = 63.9 bits (154), Expect = 6e-09
Identities = 48/156 (30%), Positives = 66/156 (42%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
+ R G + +L +S ERL +ERF +F++
Sbjct: 95 VMARARSGELKILMISVERLKNERFRNFLQ------------------------------ 124
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
+VP+SL+V+DEAHCISEW HNFRP YL L D R F R + +L
Sbjct: 125 -----QVPISLLVVDEAHCISEWGHNFRPDYLKLPDY------QRQFNIRQT----LLLT 169
Query: 365 LTATASVATAAAITSALRTPTVVASDVARTNLQLSI 472
TAT V ++ VV + R NL L +
Sbjct: 170 ATATPKVIADMQAKFSIAEDDVVTTGFYRPNLNLLV 205
[206][TOP]
>UniRef100_Q1LI26 ATP-dependent DNA helicase RecQ n=1 Tax=Ralstonia metallidurans
CH34 RepID=Q1LI26_RALME
Length = 630
Score = 63.9 bits (154), Expect = 6e-09
Identities = 48/159 (30%), Positives = 67/159 (42%), Gaps = 2/159 (1%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
+E LL G +D+L+V+PERL++ RF +
Sbjct: 117 VERDLLAGRLDILYVAPERLMTPRFLDLLE------------------------------ 146
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
R V L +DEAHC+S+W H+FRP Y+ L+ LH P P + A
Sbjct: 147 -----RTRVGLFAIDEAHCVSQWGHDFRPEYIQLS-VLH----------ERFPRVPRI-A 189
Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIV 475
LTATA T I AL +V S R N++ I+
Sbjct: 190 LTATADALTRQEIVERLALDEASVFISSFDRPNIRYRII 228
[207][TOP]
>UniRef100_Q1I6V3 ATP-dependent DNA helicase n=1 Tax=Pseudomonas entomophila L48
RepID=Q1I6V3_PSEE4
Length = 715
Score = 63.9 bits (154), Expect = 6e-09
Identities = 44/137 (32%), Positives = 59/137 (43%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
+ GRL G V +L+++PERL+ R F+R
Sbjct: 99 LAGRLRRGEVKMLYLAPERLVQPRMLEFLRG----------------------------- 129
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
+ VSL +DEAHC+S+W H+FRP YL L + LF PH P + A
Sbjct: 130 ------LEVSLFAIDEAHCVSQWGHDFRPEYLQLGQL------AELF-----PHVPRI-A 171
Query: 365 LTATASVATAAAITSAL 415
LTATA + T I L
Sbjct: 172 LTATADMRTREEIVQRL 188
[208][TOP]
>UniRef100_B2GG45 Putative ATP-dependent DNA helicase n=1 Tax=Kocuria rhizophila
DC2201 RepID=B2GG45_KOCRD
Length = 716
Score = 63.9 bits (154), Expect = 6e-09
Identities = 55/180 (30%), Positives = 76/180 (42%), Gaps = 7/180 (3%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
I L G +DVL VSPERL + RF + G
Sbjct: 114 ISQALDRGEIDVLLVSPERLNNPRFRDEQLPQLVQRLG---------------------- 151
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
L+V+DEAHCIS+W H+FRP Y + D L RL P + AVLA
Sbjct: 152 ----------LLVVDEAHCISDWGHDFRPDYRRIKDML-----GRL------PESVAVLA 190
Query: 365 LTATASVATAAAITSALRTPTVVASDV-------ARTNLQLSIVRAPTVDAKLPLLLRLL 523
TATA+ + L + + +V +R +L+L ++R P+ A+L LL L
Sbjct: 191 TTATANERVIEDVREQLGVGSGYSGEVFMLRGPLSRASLRLGVLRLPSTAARLAWLLEHL 250
[209][TOP]
>UniRef100_B1JCL1 ATP-dependent DNA helicase RecQ n=1 Tax=Pseudomonas putida W619
RepID=B1JCL1_PSEPW
Length = 714
Score = 63.9 bits (154), Expect = 6e-09
Identities = 44/137 (32%), Positives = 59/137 (43%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
+ GRL G V +L+++PERL+ R F+R
Sbjct: 99 LAGRLRRGEVKMLYLAPERLVQPRMLDFLRG----------------------------- 129
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
+ VSL +DEAHC+S+W H+FRP YL L + LF PH P + A
Sbjct: 130 ------LDVSLFAIDEAHCVSQWGHDFRPEYLQLGQL------AELF-----PHVPRI-A 171
Query: 365 LTATASVATAAAITSAL 415
LTATA + T I L
Sbjct: 172 LTATADMRTREEIVQRL 188
[210][TOP]
>UniRef100_Q1Z717 Putative putative ATP-dependent DNA helicase RecQ n=1
Tax=Photobacterium profundum 3TCK RepID=Q1Z717_PHOPR
Length = 641
Score = 63.9 bits (154), Expect = 6e-09
Identities = 54/168 (32%), Positives = 72/168 (42%), Gaps = 2/168 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G VL +S ERL +ERF F+ +V
Sbjct: 103 GETKVLMISVERLKNERFRQFIS-----------------------------------QV 127
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA-- 379
VSL+V+DEAHCISEW HNFRP YL L R + P VL LTATA
Sbjct: 128 QVSLLVVDEAHCISEWGHNFRPDYLKLPYY------------RQLLNIPQVLLLTATATP 175
Query: 380 SVATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
+V + + ++ + R NL L+I+ A + KLP L ++L
Sbjct: 176 NVIQDMSTKFGIAKQDIIVTGFYRPNLDLTILAAED-ENKLPTLYKVL 222
[211][TOP]
>UniRef100_Q1VF27 Putative ATP-dependent DNA helicase RecQ n=1 Tax=Vibrio
alginolyticus 12G01 RepID=Q1VF27_VIBAL
Length = 641
Score = 63.9 bits (154), Expect = 6e-09
Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + +L +S ERL +ERF F+R +V
Sbjct: 107 GQIKILMISVERLKNERFREFIR-----------------------------------QV 131
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P+SL+V+DEAHCISEW HNFRP YL L + + P L LTATA+
Sbjct: 132 PISLMVIDEAHCISEWGHNFRPDYLKLPQY------------QRELNIPQSLLLTATATP 179
Query: 386 ATAAAITSA--LRTPTVVASDVARTNLQLSIV 475
A + + + + + R+NL +S++
Sbjct: 180 AVIEDMQKKFDISSEHITVTGFYRSNLDISVI 211
[212][TOP]
>UniRef100_C9QMN5 ATP-dependent DNA helicase RecQ family n=1 Tax=Vibrio orientalis
CIP 102891 RepID=C9QMN5_VIBOR
Length = 646
Score = 63.9 bits (154), Expect = 6e-09
Identities = 53/178 (29%), Positives = 76/178 (42%), Gaps = 5/178 (2%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
+ ++ +G + +L +S ERL +ERF F+
Sbjct: 104 VMNQIRQGELKILMISVERLKNERFRQFIS------------------------------ 133
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
++P+SL+V+DEAHCISEW HNFRP YL L L + P L
Sbjct: 134 -----QIPLSLLVVDEAHCISEWGHNFRPDYLKLPQYLQ------------ELNIPQALL 176
Query: 365 LTATASVATAAAITSALRTPTVVASDVA-----RTNLQLSIVRAPTVDAKLPLLLRLL 523
LTAT AT + I R ++ +D+ R+NL ++I D K LL LL
Sbjct: 177 LTAT---ATQSVIEDMQRKFSIEPNDIIITGFYRSNLDITIAPCEEED-KSEALLELL 230
[213][TOP]
>UniRef100_C9LEK0 ATP-dependent DNA helicase RecQ n=1 Tax=Prevotella tannerae ATCC
51259 RepID=C9LEK0_9BACT
Length = 607
Score = 63.9 bits (154), Expect = 6e-09
Identities = 42/109 (38%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Frame = +2
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
+P+SLV +DEAHC+S+W H+FRP Y+ L L + GS F +ALTATA
Sbjct: 128 LPISLVAIDEAHCVSQWGHDFRPEYVQLG-TLRKAFGSAPF-----------MALTATAD 175
Query: 383 VATAAAITSA--LRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
T I L +P V S R NL L++ R KL + R L
Sbjct: 176 EVTRQDIRERLNLHSPRVFISSFDRPNLSLNVFRGLNGAEKLKAINRFL 224
[214][TOP]
>UniRef100_C1WPH1 ATP-dependent DNA helicase, RecQ family n=1 Tax=Kribbella flavida
DSM 17836 RepID=C1WPH1_9ACTO
Length = 547
Score = 63.9 bits (154), Expect = 6e-09
Identities = 39/99 (39%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +2
Query: 212 SLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVAT 391
+L+V+DE HC+S W H+FRP YL L D + P VL LTATAS
Sbjct: 138 ALLVVDEVHCVSSWGHDFRPDYLRLGDLV------------DQLGRPVVLGLTATASRPV 185
Query: 392 AAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKL 502
+ + LR P VV S R NL L+ V A D +L
Sbjct: 186 RSEVVERLRLRDPLVVVSGFDRPNLSLAAVPATDADGRL 224
[215][TOP]
>UniRef100_C0XBN4 ATP-dependent helicase n=1 Tax=Lactobacillus gasseri JV-V03
RepID=C0XBN4_9LACO
Length = 475
Score = 63.9 bits (154), Expect = 6e-09
Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Frame = +2
Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388
+SLV +DEAHCIS+W H+FRPAY + D + + P +LALTATA+ +
Sbjct: 130 ISLVAVDEAHCISQWGHDFRPAYRQIMDGVKSIKSN-----------PNILALTATATPS 178
Query: 389 TAAAITSALRTP--TVVASDVARTNLQLSIVRAP 484
I L+ P V + AR NL +V P
Sbjct: 179 VQKDIAEQLKIPNKNYVITSFARPNLSFKVVDNP 212
[216][TOP]
>UniRef100_C0N5N7 ATP-dependent DNA helicase RecQ n=1 Tax=Methylophaga thiooxidans
DMS010 RepID=C0N5N7_9GAMM
Length = 708
Score = 63.9 bits (154), Expect = 6e-09
Identities = 45/138 (32%), Positives = 61/138 (44%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
+E +L G +D+L+V+PERLL ER SF+
Sbjct: 102 VEQQLEAGQIDLLYVAPERLLGERMLSFLE------------------------------ 131
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
R+PV+L +DEAHC+S+W H+FRP Y L R+ R P P + A
Sbjct: 132 -----RLPVALFAIDEAHCVSQWGHDFRPEYQQL----------RILHER-FPSVPRI-A 174
Query: 365 LTATASVATAAAITSALR 418
LTATA T I L+
Sbjct: 175 LTATADKRTRIEIIEQLK 192
[217][TOP]
>UniRef100_B5GW64 ATP-dependent DNA helicase n=1 Tax=Streptomyces clavuligerus ATCC
27064 RepID=B5GW64_STRCL
Length = 715
Score = 63.9 bits (154), Expect = 6e-09
Identities = 56/176 (31%), Positives = 72/176 (40%), Gaps = 7/176 (3%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFM--RAHAMTGGGGGRGDGTAATDDGDGGAGGD 178
I+ + G VDVL VSPERL + F + R A TG
Sbjct: 107 IQAEVAAGTVDVLLVSPERLNNPDFRDHVLPRLAAATG---------------------- 144
Query: 179 GPGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAV 358
L+V+DEAHCIS+W H+FRP Y L R SP P V
Sbjct: 145 ------------LLVVDEAHCISDWGHDFRPDYRRL----------RTMLAELSPDVP-V 181
Query: 359 LALTATASVATAAAITSALRTPT-----VVASDVARTNLQLSIVRAPTVDAKLPLL 511
LA TATA+ A + L T T V+ + R +L L ++R P +L L
Sbjct: 182 LATTATANARVTADVAEQLGTGTDGDALVLRGPLDRESLGLGVIRLPDAATRLAWL 237
[218][TOP]
>UniRef100_A7K3L3 Superfamily II DNA helicase n=2 Tax=Vibrio sp. Ex25
RepID=A7K3L3_9VIBR
Length = 677
Score = 63.9 bits (154), Expect = 6e-09
Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 2/160 (1%)
Frame = +2
Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181
R+ + G + +L +S ERL +ERF F+R
Sbjct: 135 RVMAGVKNGQIKILMISVERLKNERFREFIR----------------------------- 165
Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361
+VP+SL+V+DEAHCISEW HNFRP YL L + + P L
Sbjct: 166 ------QVPISLMVVDEAHCISEWGHNFRPDYLKLPQY------------QRELNIPQSL 207
Query: 362 ALTATASVATAAAITSA--LRTPTVVASDVARTNLQLSIV 475
LTATA+ A + + + + + R NL +S++
Sbjct: 208 LLTATATPAVIEDMKQKFDIASEHITVTGFYRPNLDISVI 247
[219][TOP]
>UniRef100_A0ACI1 Putative modular polyketide synthase n=1 Tax=Streptomyces ambofaciens
ATCC 23877 RepID=A0ACI1_STRAM
Length = 6726
Score = 63.9 bits (154), Expect = 6e-09
Identities = 61/154 (39%), Positives = 65/154 (42%), Gaps = 16/154 (10%)
Frame = +1
Query: 109 RRRRRSRRRHRRHRRR*RRGR--RRRPGGPRPPGARVPRCAGRGPLHL*VVP*LPPRVPA 282
RRRR RR R RR RGR RRRP R GAR P R P P LP R
Sbjct: 2523 RRRRDGRRLPRGARRTAGRGRPARRRPLRHRRGGARGPAPRLRRPRRTTPRPDLPAR--- 2579
Query: 283 PGRRAA-------RLAWQPPLPPPRVPSRAGGAGADRHRQRGH----RGGHHVGAAHANS 429
PGR AA R + PLP R R G+ DRHR R RG H G
Sbjct: 2580 PGRDAAPGPPGAHRRPGRHPLPAARRARRRSGSAVDRHRGRRRRGRGRGTHQPGPGRRVG 2639
Query: 430 GGERRGADQPAAV---HSPRAHRGRQAPAPPPAA 522
G RGA P + P R R+ PAP AA
Sbjct: 2640 PGPGRGAGTPPPLGRSGRPARRRPRRRPAPRRAA 2673
[220][TOP]
>UniRef100_A9URZ3 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9URZ3_MONBE
Length = 1241
Score = 63.9 bits (154), Expect = 6e-09
Identities = 50/170 (29%), Positives = 74/170 (43%), Gaps = 2/170 (1%)
Frame = +2
Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196
+LEG +DVLF++PE L++ + A
Sbjct: 653 VLEGRIDVLFIAPETLITSWLQQLLLHRD------------------------------A 682
Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376
PR+ + V DEAHC+SEWSHNFRPAYL +A L G +LALTAT
Sbjct: 683 PRIAFATV--DEAHCVSEWSHNFRPAYLRIAGVLQNVFG-----------VHNILALTAT 729
Query: 377 ASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A++ T +I + + ++ +NLQL+ +L LL++
Sbjct: 730 ATLVTQRSIQTHLGIEDSGIIRLFSVPSNLQLAASTPMDRKQRLVYLLKV 779
[221][TOP]
>UniRef100_Q2FSZ9 ATP-dependent DNA helicase RecQ n=1 Tax=Methanospirillum hungatei
JF-1 RepID=Q2FSZ9_METHJ
Length = 606
Score = 63.9 bits (154), Expect = 6e-09
Identities = 49/173 (28%), Positives = 74/173 (42%), Gaps = 2/173 (1%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
IEG +L+G++ +L++SPERL+ F F+++
Sbjct: 102 IEGSILDGSLKLLYISPERLVQPSFIEFLKS----------------------------- 132
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
+SL +DEAHCIS+W H FRP Y L+ R P ++A
Sbjct: 133 ------TRISLFAIDEAHCISQWGHEFRPEYRKLS-----------IIRRTFADVP-IIA 174
Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517
LTATA+ + + I S +L P V R NL IV+ + +L L+
Sbjct: 175 LTATATPSVRSDIISELSLHNPAVFVGSFNRENLIYRIVKKEDGEQQLVQFLK 227
[222][TOP]
>UniRef100_UPI0001AF409A ATP-dependent DNA helicase RecQ n=1 Tax=Pseudomonas syringae pv.
oryzae str. 1_6 RepID=UPI0001AF409A
Length = 644
Score = 63.5 bits (153), Expect = 8e-09
Identities = 50/156 (32%), Positives = 66/156 (42%), Gaps = 2/156 (1%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
+ R G + +L +S ERL +ERF +F+
Sbjct: 95 VMARARSGELKILMISVERLKNERFRNFIA------------------------------ 124
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
+VP+SL+V+DEAHCISEW HNFRP YL L D R F + P L
Sbjct: 125 -----QVPISLLVVDEAHCISEWGHNFRPDYLKLPDY------QREF------NIPQTLL 167
Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQL 466
LTATA+ + A+ VV + R NL L
Sbjct: 168 LTATATPQVIIDMQDKFAIAPDDVVTTGFYRANLHL 203
[223][TOP]
>UniRef100_Q9CEM9 ATP-dependent DNA helicase RecQ n=1 Tax=Lactococcus lactis subsp.
lactis RepID=Q9CEM9_LACLA
Length = 592
Score = 63.5 bits (153), Expect = 8e-09
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 2/153 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + +LFV+PER + F +F++ ++
Sbjct: 104 GEIKLLFVAPERFSLDYFNAFLQ-----------------------------------KL 128
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P+ LV +DEAHCIS+W H+FRP+Y+ A L P + P VLALTATA+
Sbjct: 129 PIDLVAIDEAHCISQWGHDFRPSYVDFASHLQYLPTN-----------PTVLALTATATP 177
Query: 386 ATAAAITSALR-TPT-VVASDVARTNLQLSIVR 478
A I L +P+ + + R NL+ +V+
Sbjct: 178 KVADDIQKLLSISPSHTIKTGFLRENLRFEVVK 210
[224][TOP]
>UniRef100_Q8XV07 Probable atp-dependent dna helicase protein n=1 Tax=Ralstonia
solanacearum RepID=Q8XV07_RALSO
Length = 637
Score = 63.5 bits (153), Expect = 8e-09
Identities = 49/174 (28%), Positives = 73/174 (41%), Gaps = 2/174 (1%)
Frame = +2
Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181
++E L G +D+++V+PERL++ RF +
Sbjct: 119 QVERDLAAGRLDLVYVAPERLMTPRFLELLE----------------------------- 149
Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361
R + L +DEAHC+S+W H+FRP Y+ L+ LH PH P +
Sbjct: 150 ------RSRIGLFAIDEAHCVSQWGHDFRPEYIQLS-VLH----------ERFPHVPRI- 191
Query: 362 ALTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517
ALTATA T I AL V S R N++ +IV + +L +R
Sbjct: 192 ALTATADAVTRDEIVERLALGGARVFLSSFDRPNIRYTIVEKDSARQQLLRFIR 245
[225][TOP]
>UniRef100_Q8EEK1 RecQ domain protein n=1 Tax=Shewanella oneidensis
RepID=Q8EEK1_SHEON
Length = 654
Score = 63.5 bits (153), Expect = 8e-09
Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + +L VS ER +ERF F+++ +
Sbjct: 115 GQLKLLMVSVERFKNERFRQFIQS-----------------------------------I 139
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS- 382
P+S++V+DEAHCISEW HNFRP YL L D P VL LTATA+
Sbjct: 140 PLSMLVVDEAHCISEWGHNFRPDYLKLPDYCR------------ELSIPLVLLLTATATR 187
Query: 383 -VATAAAITSALRTPTVVASDVARTNLQLSIV 475
V AI ++ +V + R+NL L+++
Sbjct: 188 KVKQDMAIRFDIKPQHIVQTGFYRSNLDLTVL 219
[226][TOP]
>UniRef100_Q82S01 ATP-dependent DNA helicase RecQ n=1 Tax=Nitrosomonas europaea
RepID=Q82S01_NITEU
Length = 549
Score = 63.5 bits (153), Expect = 8e-09
Identities = 41/137 (29%), Positives = 60/137 (43%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
+E R+L G D+++V+PERLL+ RF + ++
Sbjct: 99 VERRMLAGEYDLVYVAPERLLTVRFRALLQ------------------------------ 128
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
R+P++L +DEAHC+S+W H+FRP Y G P P P + A
Sbjct: 129 -----RIPIALFAIDEAHCVSQWGHDFRPEY-----------GKLSILPEKFPQIPRI-A 171
Query: 365 LTATASVATAAAITSAL 415
LTA+A T A I L
Sbjct: 172 LTASADARTRADILRCL 188
[227][TOP]
>UniRef100_Q221Z2 ATP-dependent DNA helicase RecQ n=1 Tax=Rhodoferax ferrireducens
T118 RepID=Q221Z2_RHOFD
Length = 653
Score = 63.5 bits (153), Expect = 8e-09
Identities = 56/168 (33%), Positives = 73/168 (43%), Gaps = 2/168 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + +L +S ERL +ERF +F+ +V
Sbjct: 102 GQLKILMISVERLKNERFRNFIA-----------------------------------QV 126
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P+SL+V+DEAHCISEW HNFRP YL L R F P L LTATA+
Sbjct: 127 PISLLVVDEAHCISEWGHNFRPDYLKLPHY------QRQF------GIPQTLLLTATATP 174
Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
A + + A+ VV + R NL L +V A + KL LL L
Sbjct: 175 PVVADMQTRFAIAAHDVVTTGFYRPNLHL-LVEAVSGRDKLQRLLEWL 221
[228][TOP]
>UniRef100_Q1D2X3 ATP-dependent DNA helicase, RecQ family n=1 Tax=Myxococcus xanthus
DK 1622 RepID=Q1D2X3_MYXXD
Length = 661
Score = 63.5 bits (153), Expect = 8e-09
Identities = 51/166 (30%), Positives = 68/166 (40%), Gaps = 4/166 (2%)
Frame = +2
Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196
L +G++ +L+V+PER +ERF + +R
Sbjct: 121 LRDGSLKLLYVAPERFNNERFTALLR---------------------------------- 146
Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376
+ +SL +DEAHC+SEW HNFRP YL LA A R +LALTAT
Sbjct: 147 -ELRISLFAVDEAHCVSEWGHNFRPDYLKLAKAARDLSAER------------ILALTAT 193
Query: 377 ASVATAAAITSALRTP--TVVASDVARTNLQLSI--VRAPTVDAKL 502
A+ + I P V + R NL L V A DA L
Sbjct: 194 ATPSVVRDICQGFGIPEENAVVTGFYRQNLTLETTPVHAEARDAFL 239
[229][TOP]
>UniRef100_Q0HV37 ATP-dependent DNA helicase, RecQ family n=1 Tax=Shewanella sp. MR-7
RepID=Q0HV37_SHESR
Length = 665
Score = 63.5 bits (153), Expect = 8e-09
Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + +L VS ER +ERF F+++ +
Sbjct: 122 GELKLLMVSVERFKNERFRQFIQS-----------------------------------I 146
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS- 382
P+S++V+DEAHCISEW HNFRP YL L D R P VL LTATA+
Sbjct: 147 PISMLVVDEAHCISEWGHNFRPDYLKLPDY------------RRELAIPLVLLLTATATR 194
Query: 383 -VATAAAITSALRTPTVVASDVARTNLQLSIV 475
V A ++ +V + R+NL L+++
Sbjct: 195 KVKLDMAARFDIKPQHIVQTGFYRSNLDLTVL 226
[230][TOP]
>UniRef100_Q0HIU7 ATP-dependent DNA helicase, RecQ family n=1 Tax=Shewanella sp. MR-4
RepID=Q0HIU7_SHESM
Length = 658
Score = 63.5 bits (153), Expect = 8e-09
Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + +L VS ER +ERF F+++ +
Sbjct: 115 GELKLLMVSVERFKNERFRQFIQS-----------------------------------I 139
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS- 382
P+S++V+DEAHCISEW HNFRP YL L D R P VL LTATA+
Sbjct: 140 PISMLVVDEAHCISEWGHNFRPDYLKLPDY------------RRELAIPLVLLLTATATR 187
Query: 383 -VATAAAITSALRTPTVVASDVARTNLQLSIV 475
V A ++ +V + R+NL L+++
Sbjct: 188 KVKLDMAARFDIKPQHIVQTGFYRSNLDLTVL 219
[231][TOP]
>UniRef100_C4XPI2 ATP-dependent DNA helicase RecQ n=1 Tax=Desulfovibrio magneticus
RS-1 RepID=C4XPI2_DESMR
Length = 743
Score = 63.5 bits (153), Expect = 8e-09
Identities = 45/151 (29%), Positives = 66/151 (43%), Gaps = 2/151 (1%)
Frame = +2
Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196
L G +D+L+ +PER +++ FA+ +
Sbjct: 102 LRRGELDILYTAPERFMTQGFANLLAG--------------------------------- 128
Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376
+P++L +DEAHC+S+W H+FRP YL LA H PG PR +ALTAT
Sbjct: 129 --LPLALFAIDEAHCVSQWGHDFRPEYLQLASIAHDFPG----VPR--------MALTAT 174
Query: 377 ASVATAAAITSALR--TPTVVASDVARTNLQ 463
A T A I + L V A+ R N++
Sbjct: 175 ADGPTRADILTRLELSQARVFATGFDRPNIR 205
[232][TOP]
>UniRef100_B7VKE2 ATP-dependent DNA helicase recQ n=1 Tax=Vibrio splendidus LGP32
RepID=B7VKE2_VIBSL
Length = 644
Score = 63.5 bits (153), Expect = 8e-09
Identities = 49/151 (32%), Positives = 64/151 (42%), Gaps = 2/151 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G +L +S ERL +ERF F+ +V
Sbjct: 103 GDTKILMISVERLKNERFRQFIS-----------------------------------QV 127
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P+SL+V+DEAHCISEW HNFRP YL L + + P VL LTATA+
Sbjct: 128 PISLLVVDEAHCISEWGHNFRPDYLKLPQY------------QKQLNIPQVLLLTATATT 175
Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSI 472
+ + S + VV + R NL LSI
Sbjct: 176 SVIQDMKSKFEIDEERVVVTGFYRQNLDLSI 206
[233][TOP]
>UniRef100_B6EQ04 Putative ATP-dependent DNA helicase n=1 Tax=Aliivibrio salmonicida
LFI1238 RepID=B6EQ04_ALISL
Length = 639
Score = 63.5 bits (153), Expect = 8e-09
Identities = 46/152 (30%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + +L +S ERL +ERF F+ ++
Sbjct: 104 GDIKILMISVERLKNERFRQFIA-----------------------------------QI 128
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
+SL+V+DEAHCISEW HNFRP YL L R + + P VL LTATA+
Sbjct: 129 NISLLVVDEAHCISEWGHNFRPDYLKLPQ------------DREALNIPHVLLLTATATP 176
Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSIV 475
A ++ + +V + R+NL +SI+
Sbjct: 177 AVIEDMSKKFKIEKDDIVITGFYRSNLDISII 208
[234][TOP]
>UniRef100_B3R7T4 ATP-dependent DNA helicase n=1 Tax=Cupriavidus taiwanensis
RepID=B3R7T4_CUPTR
Length = 615
Score = 63.5 bits (153), Expect = 8e-09
Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 2/159 (1%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
+E LL G +++L+V+PERL++ RF +
Sbjct: 102 VERDLLAGRIEILYVAPERLMTPRFLDLLE------------------------------ 131
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
R V L +DEAHC+S+W H+FRP Y+ L+ LH P+ P + A
Sbjct: 132 -----RTRVGLFAIDEAHCVSQWGHDFRPEYIQLS-VLH----------ERFPYVPRI-A 174
Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIV 475
LTATA T I AL + S R N++ IV
Sbjct: 175 LTATADALTRDEIVERLALHDARIFISSFDRPNIRYRIV 213
[235][TOP]
>UniRef100_B2UEM7 ATP-dependent DNA helicase RecQ n=1 Tax=Ralstonia pickettii 12J
RepID=B2UEM7_RALPJ
Length = 637
Score = 63.5 bits (153), Expect = 8e-09
Identities = 49/174 (28%), Positives = 73/174 (41%), Gaps = 2/174 (1%)
Frame = +2
Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181
++E L G +D+++V+PERL++ RF +
Sbjct: 119 QVERDLAAGRLDLVYVAPERLMTPRFLELLE----------------------------- 149
Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361
R + L +DEAHC+S+W H+FRP Y+ L+ LH PH P +
Sbjct: 150 ------RSRIGLFAIDEAHCVSQWGHDFRPEYIQLS-VLH----------ERFPHVPRI- 191
Query: 362 ALTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517
ALTATA T I AL V S R N++ +IV + +L +R
Sbjct: 192 ALTATADAVTRDEIIERLALTGSRVFLSSFDRPNIRYTIVEKDSARQQLLRFIR 245
[236][TOP]
>UniRef100_A0KWR1 ATP-dependent DNA helicase, RecQ family n=1 Tax=Shewanella sp.
ANA-3 RepID=A0KWR1_SHESA
Length = 658
Score = 63.5 bits (153), Expect = 8e-09
Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G + +L VS ER +ERF F+++ +
Sbjct: 115 GELKLLMVSVERFKNERFRQFIQS-----------------------------------I 139
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS- 382
P+S++V+DEAHCISEW HNFRP YL L D R P VL LTATA+
Sbjct: 140 PISMLVVDEAHCISEWGHNFRPDYLKLPDY------------RRELAIPLVLLLTATATR 187
Query: 383 -VATAAAITSALRTPTVVASDVARTNLQLSIV 475
V A ++ +V + R+NL L+++
Sbjct: 188 KVKLDMAARFDIKPQHIVQTGFYRSNLDLTVL 219
[237][TOP]
>UniRef100_C7TCD8 ATP-dependent DNA helicase RecQ n=1 Tax=Lactobacillus rhamnosus GG
RepID=C7TCD8_LACRG
Length = 469
Score = 63.5 bits (153), Expect = 8e-09
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Frame = +2
Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379
++ + L+V+DEAHCIS+W +FRPAYL L R H AVLALTATA
Sbjct: 127 QLDLGLLVIDEAHCISQWGPDFRPAYLQLGRV------------RAQLHVDAVLALTATA 174
Query: 380 SVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
+ I + A++ P +A V R N+ L + K L++LL
Sbjct: 175 PNQVRSDILNQLAMQNPNTIADSVDRPNIFLGVEMCQNEQEKHQRLVQLL 224
[238][TOP]
>UniRef100_C5EPJ0 ATP-dependent DNA helicase RecQ n=1 Tax=Clostridiales bacterium
1_7_47FAA RepID=C5EPJ0_9FIRM
Length = 824
Score = 63.5 bits (153), Expect = 8e-09
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 2/151 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G +++V+PERL+SE F F A+ G RV
Sbjct: 104 GRYPIIYVAPERLMSEDFLRF----ALDG-----------------------------RV 130
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
+S+V +DEAHC+S+W +FRP+YL + D ++ P P V A TATA+
Sbjct: 131 KISMVAVDEAHCVSQWGQDFRPSYLKIVDFIN-----------QLPVRPIVSAFTATATA 179
Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSI 472
I LR P V+ + R+NL ++
Sbjct: 180 EVRDDIIDILMLRNPNVMTTGFDRSNLYFAV 210
[239][TOP]
>UniRef100_C4RGP4 ATP-dependent DNA helicase n=1 Tax=Micromonospora sp. ATCC 39149
RepID=C4RGP4_9ACTO
Length = 572
Score = 63.5 bits (153), Expect = 8e-09
Identities = 43/106 (40%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Frame = +2
Query: 212 SLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVAT 391
+LV +DEAHCIS W ++FRP YL L + G P V+ALTATAS
Sbjct: 170 ALVAIDEAHCISAWGYDFRPDYLALGHLIEGL------------GRPPVVALTATASPPV 217
Query: 392 AAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
I + LR VV S + R NL L + PT D + LL LL
Sbjct: 218 RDDIIARLRLRDAEVVVSGLDRPNLFLEVAHCPTEDYRWRRLLALL 263
[240][TOP]
>UniRef100_C2EMY3 ATP-dependent helicase n=1 Tax=Lactobacillus ultunensis DSM 16047
RepID=C2EMY3_9LACO
Length = 588
Score = 63.5 bits (153), Expect = 8e-09
Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Frame = +2
Query: 209 VSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASVA 388
+ LV +DEAHCIS+W H+FRPAY L + ++ P +LALTATA+ A
Sbjct: 130 IDLVAVDEAHCISQWGHDFRPAYRQLLEGINSLKSK-----------PNILALTATATPA 178
Query: 389 TAAAITSALRTP--TVVASDVARTNLQLSIVRAP 484
I L P V + AR NL +V +P
Sbjct: 179 VQDDIGEQLNIPKENFVITSFARPNLSFKVVNSP 212
[241][TOP]
>UniRef100_B5SJL3 Atp-dependent dna helicase protein n=3 Tax=Ralstonia solanacearum
RepID=B5SJL3_RALSO
Length = 648
Score = 63.5 bits (153), Expect = 8e-09
Identities = 49/174 (28%), Positives = 73/174 (41%), Gaps = 2/174 (1%)
Frame = +2
Query: 2 RIEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDG 181
++E L G +D+++V+PERL++ RF +
Sbjct: 130 QVERDLAAGRLDLVYVAPERLMTPRFLELLE----------------------------- 160
Query: 182 PGGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVL 361
R + L +DEAHC+S+W H+FRP Y+ L+ LH PH P +
Sbjct: 161 ------RSRIGLFAIDEAHCVSQWGHDFRPEYIQLS-VLH----------ERFPHVPRI- 202
Query: 362 ALTATASVATAAAITS--ALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLR 517
ALTATA T I AL V S R N++ +IV + +L +R
Sbjct: 203 ALTATADAVTRDEIVERLALGGERVFLSSFDRPNIRYTIVEKDSARQQLLRFIR 256
[242][TOP]
>UniRef100_B4X0N0 ATP-dependent DNA helicase, RecQ family n=1 Tax=Alcanivorax sp.
DG881 RepID=B4X0N0_9GAMM
Length = 633
Score = 63.5 bits (153), Expect = 8e-09
Identities = 48/152 (31%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Frame = +2
Query: 23 EGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPR 202
+G++ +L+V+PERL +ERF + R R
Sbjct: 104 DGSIKLLYVAPERLANERFLA-----------------------------------RLKR 128
Query: 203 VPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATAS 382
+ +S++ +DEAHC+SEW HNFRP YL LA R VLALTATA+
Sbjct: 129 LSISMMAVDEAHCVSEWGHNFRPDYLKLAQLASDLNVGR------------VLALTATAT 176
Query: 383 VATAAAI--TSALRTPTVVASDVARTNLQLSI 472
A I + ++ V + R NL LSI
Sbjct: 177 PQVAEQIRDSFSIAREDHVQTGFFRPNLALSI 208
[243][TOP]
>UniRef100_B4D338 ATP-dependent DNA helicase, RecQ family n=1 Tax=Chthoniobacter
flavus Ellin428 RepID=B4D338_9BACT
Length = 644
Score = 63.5 bits (153), Expect = 8e-09
Identities = 55/170 (32%), Positives = 68/170 (40%), Gaps = 2/170 (1%)
Frame = +2
Query: 17 LLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRA 196
L G + +L+V+PERL E F +R
Sbjct: 101 LRNGTLKLLYVAPERLSGEAFLDRLR---------------------------------- 126
Query: 197 PRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTAT 376
R +SL+ +DEAHCISEW HNFRP YL LA R+ G VLALTAT
Sbjct: 127 -RTRISLMAIDEAHCISEWGHNFRPEYLRLA---------RVVEELG---LHPVLALTAT 173
Query: 377 ASVATAAAITSALRTPTV--VASDVARTNLQLSIVRAPTVDAKLPLLLRL 520
A+ AA I A R V + R NL L + + L RL
Sbjct: 174 ATPEVAADICRAFRIARERHVQTSFRRPNLHLRLTPCAAQERLATLTKRL 223
[244][TOP]
>UniRef100_A6F761 ATP-dependent DNA helicase RecQ n=1 Tax=Moritella sp. PE36
RepID=A6F761_9GAMM
Length = 637
Score = 63.5 bits (153), Expect = 8e-09
Identities = 49/170 (28%), Positives = 71/170 (41%)
Frame = +2
Query: 14 RLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGR 193
++ EG V +L +S ERL +ERF F++
Sbjct: 99 KVREGEVKILMISVERLKNERFRRFIK--------------------------------- 125
Query: 194 APRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTA 373
+VP+SL+V+DEAHCISEW HNFRP YL L + + +L TA
Sbjct: 126 --QVPISLLVIDEAHCISEWGHNFRPDYLKLPQ----------YQKELNIKQALLLTATA 173
Query: 374 TASVATAAAITSALRTPTVVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
T +V ++ ++ + R NL L ++ D KL L R L
Sbjct: 174 TPAVIKDMETKFNIKPEDIIQTGFHRANLSL-LMHPIAQDKKLHALTRWL 222
[245][TOP]
>UniRef100_A3XVG4 Putative ATP-dependent DNA helicase RecQ n=1 Tax=Vibrio sp. MED222
RepID=A3XVG4_9VIBR
Length = 644
Score = 63.5 bits (153), Expect = 8e-09
Identities = 49/151 (32%), Positives = 64/151 (42%), Gaps = 2/151 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G +L +S ERL +ERF F+ +V
Sbjct: 103 GDTKILMISVERLKNERFRQFIS-----------------------------------QV 127
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P+SL+V+DEAHCISEW HNFRP YL L + + P VL LTATA+
Sbjct: 128 PISLLVVDEAHCISEWGHNFRPDYLKLPQY------------QKQLNIPQVLLLTATATT 175
Query: 386 ATAAAITS--ALRTPTVVASDVARTNLQLSI 472
+ + S + VV + R NL LSI
Sbjct: 176 SVIQDMKSKFEIDEERVVVTGFYRQNLDLSI 206
[246][TOP]
>UniRef100_A3UUF8 Putative ATP-dependent DNA helicase RecQ n=1 Tax=Vibrio splendidus
12B01 RepID=A3UUF8_VIBSP
Length = 644
Score = 63.5 bits (153), Expect = 8e-09
Identities = 49/151 (32%), Positives = 64/151 (42%), Gaps = 2/151 (1%)
Frame = +2
Query: 26 GAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGPGGRAPRV 205
G +L +S ERL +ERF F+ +V
Sbjct: 103 GDTKILMISVERLKNERFRQFIS-----------------------------------QV 127
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P+SL+V+DEAHCISEW HNFRP YL L + + P VL LTATA+
Sbjct: 128 PISLLVVDEAHCISEWGHNFRPDYLKLPQY------------QKQLNIPQVLLLTATATT 175
Query: 386 ATAAAITSA--LRTPTVVASDVARTNLQLSI 472
+ + S + VV + R NL LSI
Sbjct: 176 SVIQDMKSKFDIDEERVVVTGFYRQNLDLSI 206
[247][TOP]
>UniRef100_B0XH16 Rothmund-thomson syndrome DNA helicase recq4 n=1 Tax=Culex
quinquefasciatus RepID=B0XH16_CULQU
Length = 1093
Score = 63.5 bits (153), Expect = 8e-09
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Frame = +2
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P++ +DEAHC+S+WSHNFRP+YL + L G + +L LTATA+V
Sbjct: 476 PIAFACIDEAHCVSQWSHNFRPSYLMICRVLKEKLGVK-----------TILGLTATATV 524
Query: 386 ATAAAITSALRTPT----VVASDVARTNLQLSIVRAPTVDAKLPLLLR 517
T +I L P +++ NL L++ R DA L LL+
Sbjct: 525 QTRVSIVEHLGIPDGTNGIISDIPLPDNLNLTVSRDANRDAALLHLLQ 572
[248][TOP]
>UniRef100_B0WK00 Rothmund-thomson syndrome DNA helicase recq4 n=1 Tax=Culex
quinquefasciatus RepID=B0WK00_CULQU
Length = 1527
Score = 63.5 bits (153), Expect = 8e-09
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Frame = +2
Query: 206 PVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATASV 385
P++ +DEAHC+S+WSHNFRP+YL + L G + +L LTATA+V
Sbjct: 948 PIAFACIDEAHCVSQWSHNFRPSYLMICRVLKEKLGVK-----------TILGLTATATV 996
Query: 386 ATAAAITSALRTPT----VVASDVARTNLQLSIVRAPTVDAKLPLLLR 517
T +I L P +++ NL L++ R DA L LL+
Sbjct: 997 QTRVSIVEHLGIPDGTNGIISDIPLPDNLNLTVSRDANRDAALLNLLQ 1044
[249][TOP]
>UniRef100_UPI00018740FD ATP-dependent DNA helicase domain protein n=1 Tax=Pseudomonas
syringae pv. tomato T1 RepID=UPI00018740FD
Length = 642
Score = 63.2 bits (152), Expect = 1e-08
Identities = 49/156 (31%), Positives = 66/156 (42%), Gaps = 2/156 (1%)
Frame = +2
Query: 5 IEGRLLEGAVDVLFVSPERLLSERFASFMRAHAMTGGGGGRGDGTAATDDGDGGAGGDGP 184
+ R G + +L +S ERL +ERF +F+
Sbjct: 95 VMARARSGELKILMISVERLKNERFRNFIA------------------------------ 124
Query: 185 GGRAPRVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLA 364
+VP+SL+V+DEAHCISEW HNFRP YL L D R F + P L
Sbjct: 125 -----QVPISLLVVDEAHCISEWGHNFRPDYLKLPDY------QREF------NIPQALL 167
Query: 365 LTATASVATAAAITS--ALRTPTVVASDVARTNLQL 466
LTATA+ + A+ V+ + R NL L
Sbjct: 168 LTATATPQVIIDMQDKFAIAPEDVITTGFYRANLHL 203
[250][TOP]
>UniRef100_UPI00016C4FD4 ATP-dependent DNA helicase, RecQ family protein n=1 Tax=Gemmata
obscuriglobus UQM 2246 RepID=UPI00016C4FD4
Length = 482
Score = 63.2 bits (152), Expect = 1e-08
Identities = 41/110 (37%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Frame = +2
Query: 200 RVPVSLVVLDEAHCISEWSHNFRPAYLHLADALHGSPGSRLFPPRGSPHAPAVLALTATA 379
RVP+ L V+DEAHC+S+W H+FRP +L L A+ P VLALTATA
Sbjct: 137 RVPIDLFVVDEAHCVSQWGHDFRPDFLALGRAI------------DDLGRPPVLALTATA 184
Query: 380 SVATAAAITSALRTPT--VVASDVARTNLQLSIVRAPTVDAKLPLLLRLL 523
+ + L P VV + R NL L ++ A K LL ++L
Sbjct: 185 TPDVIEDVLGRLGIPNADVVHTGFYRPNLTLDVIPAAGDREKCALLSKIL 234