[UP]
[1][TOP]
>UniRef100_B7PVV6 DNA-directed RNA polymerase n=1 Tax=Ixodes scapularis
RepID=B7PVV6_IXOSC
Length = 1394
Score = 258 bits (658), Expect = 3e-67
Identities = 124/187 (66%), Positives = 150/187 (80%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P KP RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 307 MEDWDFLQLQCALYVNSETSGIPLNMQPKKPTRGFVQRLKGKHGRFRGNLSGKRVDFSGR 366
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVET-DD 359
TVISPDPNLR+DQVG+P+ VA+ LTYPERVT+HN + V GPD +PGANF+E+ D
Sbjct: 367 TVISPDPNLRIDQVGVPVHVAKILTYPERVTQHNLALMRTLVRNGPDVHPGANFLESRDS 426
Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
G KR+LRYGNR +A+ L G VVERHL DGDVVLFNRQPSLH++SIM+H AKV+PHRTF
Sbjct: 427 GFKRYLRYGNRDLLAQQLRPGDVVERHLRDGDVVLFNRQPSLHKLSIMAHLAKVLPHRTF 486
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 487 RFNECVC 493
[2][TOP]
>UniRef100_Q86AQ5 DNA-directed RNA polymerase III subunit rpc1 n=1 Tax=Dictyostelium
discoideum RepID=RPC1_DICDI
Length = 1450
Score = 251 bits (640), Expect = 3e-65
Identities = 115/186 (61%), Positives = 148/186 (79%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ A ++NSD LP K +RG+SQRLKGKTGRFRGNLSGKRVDFSGR
Sbjct: 300 MEDWDYLQASCAIYINSDVPGLPLQMKPTKAVRGLSQRLKGKTGRFRGNLSGKRVDFSGR 359
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNL +D+V +P +A T+TYPERVT +N +RL VI GPD +PGAN++ DG
Sbjct: 360 TVISPDPNLNIDEVAVPQLIALTMTYPERVTDYNIERLQKYVINGPDRHPGANYIIYADG 419
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K++L++GNR+K A +L +G +VERH++DGD++LFNRQPSLH++SIMSH A+V+P RT R
Sbjct: 420 VKKWLKFGNREKFAAELKIGDIVERHIIDGDIMLFNRQPSLHKLSIMSHKARVMPWRTLR 479
Query: 543 FNECVC 560
FNECVC
Sbjct: 480 FNECVC 485
[3][TOP]
>UniRef100_A7SJ34 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
RepID=A7SJ34_NEMVE
Length = 1398
Score = 250 bits (639), Expect = 5e-65
Identities = 119/187 (63%), Positives = 147/187 (78%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 307 MEDWDFLQLQCALYINSEMSGIPLNMQPKKGTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+DQV +P+ VA+ LTYPERVT+ N K + V+ G D +PGANF++ +
Sbjct: 367 TVISPDPNLRIDQVAVPIHVAKVLTYPERVTQSNLKLMKQLVLNGADQHPGANFIQQRET 426
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
N KRFL+YGNRK +AK L +G VERHL+DGDVVLFNRQPSLH++SIM+H A V PHRTF
Sbjct: 427 NTKRFLKYGNRKLIAKQLKIGDTVERHLIDGDVVLFNRQPSLHKLSIMAHLATVRPHRTF 486
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 487 RFNECVC 493
[4][TOP]
>UniRef100_C4R7G6 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4R7G6_PICPG
Length = 1460
Score = 248 bits (634), Expect = 2e-64
Identities = 120/195 (61%), Positives = 153/195 (78%), Gaps = 9/195 (4%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTA--------KPLRGISQRLKGKTGRFRGNLSG 158
++ W++LQ+ A ++NSDA N+ L S A KP+RG QRLKGK GRFRGNLSG
Sbjct: 312 IEQWDYLQLSVAMYINSDAGNMSMLPSAAGSAGSKSSKPIRGFCQRLKGKQGRFRGNLSG 371
Query: 159 KRVDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGA 338
KRVDFSGRTVISPDPNLR+D+V +P RVA+ LTYPE+VT++N+ +L V+ GPD +PGA
Sbjct: 372 KRVDFSGRTVISPDPNLRIDEVAVPDRVAKVLTYPEKVTRYNKHKLQQLVLNGPDVHPGA 431
Query: 339 NF-VETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSA 515
N+ ++ D+ N+R LR+GNR+K+A L +G +VERHL DGDVVLFNRQPSLHR+SI+SH A
Sbjct: 432 NYLLKRDEQNRRNLRFGNRQKLANTLQIGDIVERHLEDGDVVLFNRQPSLHRLSILSHFA 491
Query: 516 KVVPHRTFRFNECVC 560
K+ P RTFR NECVC
Sbjct: 492 KIRPWRTFRLNECVC 506
[5][TOP]
>UniRef100_UPI00018665E5 hypothetical protein BRAFLDRAFT_127993 n=1 Tax=Branchiostoma
floridae RepID=UPI00018665E5
Length = 1391
Score = 248 bits (632), Expect = 3e-64
Identities = 117/187 (62%), Positives = 149/187 (79%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ +P KP RG QRLKGK GRFRGNLSGKRVD+S R
Sbjct: 307 MEDWDFLQLQCALYINSEQGGIPLNMQPKKPTRGFCQRLKGKQGRFRGNLSGKRVDYSSR 366
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVET-DD 359
TVISPDPNLR+DQV +P+ VA+ LTYPE+V K N + + ++ G DT+PGANFVE+
Sbjct: 367 TVISPDPNLRIDQVAVPVHVAKILTYPEKVNKANIQLMRRLIVNGCDTHPGANFVESRAT 426
Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
G KRFL+YGNR+K+A++L G +VERHL+D DVVLFNRQPSLH++SIM+H AKV+PHRTF
Sbjct: 427 GVKRFLKYGNRQKIAQELKYGDIVERHLMDKDVVLFNRQPSLHKLSIMAHYAKVMPHRTF 486
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 487 RFNECVC 493
[6][TOP]
>UniRef100_O94666 DNA-directed RNA polymerase III subunit rpc1 n=1
Tax=Schizosaccharomyces pombe RepID=RPC1_SCHPO
Length = 1405
Score = 248 bits (632), Expect = 3e-64
Identities = 117/187 (62%), Positives = 145/187 (77%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ WE++Q+ A ++NS+ L P +KP+RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 301 MEQWEFMQLSIAMYINSEMPGLRPSDMPSKPIRGFCQRLKGKQGRFRGNLSGKRVDFSGR 360
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFV-ETDD 359
TVISPDPNLR+DQV +P R+A+ LT+PERVT N+K L + GPD +PGAN+V + +
Sbjct: 361 TVISPDPNLRIDQVAVPYRIAKILTFPERVTTQNKKHLQDCIRNGPDVHPGANYVIDRES 420
Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
G KRFLR+GNR ++A DL +G +VERHL D DVVLFNRQPSLH++SIM+H KV P RT
Sbjct: 421 GFKRFLRFGNRNRIADDLKIGDIVERHLHDNDVVLFNRQPSLHKLSIMAHLVKVRPWRTL 480
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 481 RFNECVC 487
[7][TOP]
>UniRef100_UPI00015B5AFA PREDICTED: hypothetical protein n=1 Tax=Nasonia vitripennis
RepID=UPI00015B5AFA
Length = 1372
Score = 246 bits (628), Expect = 9e-64
Identities = 118/186 (63%), Positives = 147/186 (79%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
+ WE+LQ+ A ++NS+ + +PP K RG+ QRLKGK GRFRGNLSGKRVDFS RT
Sbjct: 297 EDWEFLQLHVALYINSEMSGIPPSMQPQKAGRGLVQRLKGKQGRFRGNLSGKRVDFSSRT 356
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVET-DDG 362
VISPDPNLR++QVG+P+ VA+ LTYPERV K N + + V GPD +PGANF+E +
Sbjct: 357 VISPDPNLRIEQVGVPIHVAKILTYPERVNKCNIELMRRLVKNGPDVHPGANFIEIGKNK 416
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+RFLRYGNR+K+A+DL G +VERHL DGDVVLFNRQPSLH++SIM+H AKV+ +RTFR
Sbjct: 417 ERRFLRYGNRQKMAQDLQYGDIVERHLHDGDVVLFNRQPSLHKLSIMAHKAKVLENRTFR 476
Query: 543 FNECVC 560
FNECVC
Sbjct: 477 FNECVC 482
[8][TOP]
>UniRef100_UPI000151B46E DNA-directed RNA polymerase III largest subunit n=1 Tax=Pichia
guilliermondii ATCC 6260 RepID=UPI000151B46E
Length = 1379
Score = 246 bits (627), Expect = 1e-63
Identities = 120/193 (62%), Positives = 154/193 (79%), Gaps = 7/193 (3%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATN---LPPL---ASTAKPLRGISQRLKGKTGRFRGNLSGKR 164
M+ W++LQ+ A ++NSDA N LP + A +AKP+RG QRLKGK GRFRGNLSGKR
Sbjct: 240 MEQWDYLQLSVAMYINSDAANPALLPSMSGGAKSAKPIRGFCQRLKGKQGRFRGNLSGKR 299
Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344
VDFS RTVISPDPNLR+D+V +P RVA+ LTYPE+ T++NRK+L ++ GPD +PGAN+
Sbjct: 300 VDFSARTVISPDPNLRIDEVAVPDRVAKVLTYPEKCTRYNRKKLQQLILNGPDVHPGANY 359
Query: 345 V-ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521
V + ++ KR LR+G++ K+AK+L +G VVERH+ DGDVVLFNRQPSLHR+SI+SH AK+
Sbjct: 360 VMKQNEAAKRNLRFGDKVKLAKNLHVGDVVERHIEDGDVVLFNRQPSLHRLSILSHYAKI 419
Query: 522 VPHRTFRFNECVC 560
P RTFR NECVC
Sbjct: 420 RPWRTFRLNECVC 432
[9][TOP]
>UniRef100_C5MI79 DNA-directed RNA polymerase (Fragment) n=1 Tax=Candida tropicalis
MYA-3404 RepID=C5MI79_CANTT
Length = 1159
Score = 246 bits (627), Expect = 1e-63
Identities = 121/193 (62%), Positives = 152/193 (78%), Gaps = 7/193 (3%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPL------ASTAKPLRGISQRLKGKTGRFRGNLSGKR 164
M+ W+++Q+ A ++NSD+ N P L A +KP+R QRLKGK GRFRGNLSGKR
Sbjct: 310 MEQWDYMQLSVAMYINSDSAN-PALSAGGGGAKASKPIRAFCQRLKGKQGRFRGNLSGKR 368
Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344
VDFSGRTVISPDPNL++D+V +P RVA+ LTYPE+ T++NRK+L V GPDTYPGAN+
Sbjct: 369 VDFSGRTVISPDPNLKIDEVAVPDRVAKVLTYPEKCTRYNRKKLQRLVYNGPDTYPGANY 428
Query: 345 V-ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521
V + ++ KR LR+G+R K+AK+L +G VVERH+ DGDVVLFNRQPSLHR+SI+SH AKV
Sbjct: 429 VAKQNEPGKRNLRFGDRAKLAKNLQIGDVVERHIEDGDVVLFNRQPSLHRLSILSHYAKV 488
Query: 522 VPHRTFRFNECVC 560
P RTFR NECVC
Sbjct: 489 RPWRTFRLNECVC 501
[10][TOP]
>UniRef100_A5DM42 DNA-directed RNA polymerase n=1 Tax=Pichia guilliermondii
RepID=A5DM42_PICGU
Length = 1379
Score = 246 bits (627), Expect = 1e-63
Identities = 120/193 (62%), Positives = 154/193 (79%), Gaps = 7/193 (3%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATN---LPPL---ASTAKPLRGISQRLKGKTGRFRGNLSGKR 164
M+ W++LQ+ A ++NSDA N LP + A +AKP+RG QRLKGK GRFRGNLSGKR
Sbjct: 240 MEQWDYLQLSVAMYINSDAANPALLPSMSGGAKSAKPIRGFCQRLKGKQGRFRGNLSGKR 299
Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344
VDFS RTVISPDPNLR+D+V +P RVA+ LTYPE+ T++NRK+L ++ GPD +PGAN+
Sbjct: 300 VDFSARTVISPDPNLRIDEVAVPDRVAKVLTYPEKCTRYNRKKLQQLILNGPDVHPGANY 359
Query: 345 V-ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521
V + ++ KR LR+G++ K+AK+L +G VVERH+ DGDVVLFNRQPSLHR+SI+SH AK+
Sbjct: 360 VMKQNEAAKRNLRFGDKVKLAKNLHVGDVVERHIEDGDVVLFNRQPSLHRLSILSHYAKI 419
Query: 522 VPHRTFRFNECVC 560
P RTFR NECVC
Sbjct: 420 RPWRTFRLNECVC 432
[11][TOP]
>UniRef100_UPI00016E6B7B UPI00016E6B7B related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E6B7B
Length = 649
Score = 245 bits (626), Expect = 1e-63
Identities = 116/187 (62%), Positives = 149/187 (79%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LTYPERV K N + + V GP+ +PGANF++
Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELMRKLVRNGPEVHPGANFIQNRFT 426
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
KRFL+YGNR+K+A++L LG VVERHL+DGD+VLFNRQPSLH++SIM+H A+V PHRTF
Sbjct: 427 QIKRFLKYGNREKIAQELRLGDVVERHLIDGDIVLFNRQPSLHKLSIMAHIARVKPHRTF 486
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 487 RFNECVC 493
[12][TOP]
>UniRef100_UPI00016E6B7A UPI00016E6B7A related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E6B7A
Length = 1320
Score = 245 bits (626), Expect = 1e-63
Identities = 116/187 (62%), Positives = 149/187 (79%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 251 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 310
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LTYPERV K N + + V GP+ +PGANF++
Sbjct: 311 TVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELMRKLVRNGPEVHPGANFIQNRFT 370
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
KRFL+YGNR+K+A++L LG VVERHL+DGD+VLFNRQPSLH++SIM+H A+V PHRTF
Sbjct: 371 QIKRFLKYGNREKIAQELRLGDVVERHLIDGDIVLFNRQPSLHKLSIMAHIARVKPHRTF 430
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 431 RFNECVC 437
[13][TOP]
>UniRef100_UPI00016E6B79 UPI00016E6B79 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E6B79
Length = 1390
Score = 245 bits (626), Expect = 1e-63
Identities = 116/187 (62%), Positives = 149/187 (79%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LTYPERV K N + + V GP+ +PGANF++
Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELMRKLVRNGPEVHPGANFIQNRFT 426
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
KRFL+YGNR+K+A++L LG VVERHL+DGD+VLFNRQPSLH++SIM+H A+V PHRTF
Sbjct: 427 QIKRFLKYGNREKIAQELRLGDVVERHLIDGDIVLFNRQPSLHKLSIMAHIARVKPHRTF 486
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 487 RFNECVC 493
[14][TOP]
>UniRef100_B6K857 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6K857_SCHJY
Length = 1406
Score = 245 bits (626), Expect = 1e-63
Identities = 119/187 (63%), Positives = 144/187 (77%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ WE+LQ+ A ++NS+ L P +KP RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 301 MEQWEFLQLSVALYINSELPGLRPPDMPSKPTRGFCQRLKGKQGRFRGNLSGKRVDFSGR 360
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-VETDD 359
TVISPDPNL++DQV +PLR+A+ LTYPE+VT N L V GPD +PGAN+ V+ D
Sbjct: 361 TVISPDPNLQIDQVAVPLRIAKILTYPEKVTDQNIDALRTRVTNGPDVHPGANYVVDRDT 420
Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
G KRFLR+GNRK++A++L +G VERHL D DVVLFNRQPSLH++SIM+H KV P RT
Sbjct: 421 GIKRFLRFGNRKRIAEELHVGDTVERHLQDNDVVLFNRQPSLHKLSIMAHLVKVRPWRTL 480
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 481 RFNECVC 487
[15][TOP]
>UniRef100_A7TNS6 DNA-directed RNA polymerase n=1 Tax=Vanderwaltozyma polyspora DSM
70294 RepID=A7TNS6_VANPO
Length = 1460
Score = 245 bits (626), Expect = 1e-63
Identities = 120/193 (62%), Positives = 155/193 (80%), Gaps = 7/193 (3%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATN--LPPLAST----AKPLRGISQRLKGKTGRFRGNLSGKR 164
M+ W++LQ+ A ++NSD+ N + P AS+ AKP+RG QRLKGK GRFRGNLSGKR
Sbjct: 313 MEHWDYLQLSVAMYINSDSVNPSMMPGASSGGAKAKPIRGFCQRLKGKQGRFRGNLSGKR 372
Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344
VDFSGRTVISPDPNL +D+V +P RVA+ LTYPE+VT++NR++L A VI GP+ +PGAN+
Sbjct: 373 VDFSGRTVISPDPNLSIDEVAVPDRVAKVLTYPEKVTRYNREKLQALVINGPNVHPGANY 432
Query: 345 V-ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521
+ + ++ +R LRYG+R K+AK L +G +VERHL DGD+VLFNRQPSLHR+SI+SH AK+
Sbjct: 433 ILKANEEARRNLRYGDRLKIAKQLRVGDIVERHLEDGDIVLFNRQPSLHRLSILSHFAKI 492
Query: 522 VPHRTFRFNECVC 560
P RTFR NECVC
Sbjct: 493 RPWRTFRLNECVC 505
[16][TOP]
>UniRef100_UPI000186E437 DNA-directed RNA polymerase III largest subunit, putative n=1
Tax=Pediculus humanus corporis RepID=UPI000186E437
Length = 1364
Score = 245 bits (625), Expect = 2e-63
Identities = 117/186 (62%), Positives = 145/186 (77%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
+ W++LQ+ A ++NS+ T +P K RG+ QRLKGK GRFRGNLSGKRVDFS RT
Sbjct: 309 EDWDFLQLHCALYINSETTGIPLSMQPKKATRGLVQRLKGKQGRFRGNLSGKRVDFSSRT 368
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365
VISPDPNL++DQVG+P VA+ LT+PE+V + N L V GPDT+PGANFVE +GN
Sbjct: 369 VISPDPNLQIDQVGVPEHVAKILTFPEKVNRANIFLLRELVRNGPDTHPGANFVEDRNGN 428
Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
KR+LRYGNR K++ +L G VVERHL+D D+VLFNRQPSLH++SIM+H AKV+ HRTFR
Sbjct: 429 SKRYLRYGNRSKISSELKFGDVVERHLIDDDIVLFNRQPSLHKLSIMAHRAKVLKHRTFR 488
Query: 543 FNECVC 560
FNECVC
Sbjct: 489 FNECVC 494
[17][TOP]
>UniRef100_B0DK21 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0DK21_LACBS
Length = 1397
Score = 245 bits (625), Expect = 2e-63
Identities = 118/186 (63%), Positives = 143/186 (76%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ WE+LQ+ A ++NS+ +P KP+RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 301 MEQWEFLQLSVAMYINSELPGVPSQPGQ-KPIRGFVQRLKGKQGRFRGNLSGKRVDFSGR 359
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P RVA+ LTYPERVT HN L A+ GPD +PGANFV D
Sbjct: 360 TVISPDPNLRIDEVAVPERVAKILTYPERVTTHNINALRQAIRNGPDVHPGANFVARGD- 418
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
NK+FLR+GNR +A L +G VVERH++DGD++LFNRQPSLH++SIM H AK+ P RTFR
Sbjct: 419 NKKFLRFGNRAAIADGLGIGDVVERHIIDGDIILFNRQPSLHKLSIMCHRAKIRPWRTFR 478
Query: 543 FNECVC 560
NECVC
Sbjct: 479 LNECVC 484
[18][TOP]
>UniRef100_UPI0000DA3EBF PREDICTED: similar to polymerase (RNA) III (DNA directed)
polypeptide A, 155kDa n=1 Tax=Rattus norvegicus
RepID=UPI0000DA3EBF
Length = 1390
Score = 243 bits (620), Expect = 7e-63
Identities = 116/187 (62%), Positives = 147/187 (78%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GPD +PGANF++
Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVRNGPDVHPGANFIQQRHM 426
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H AKV PHRTF
Sbjct: 427 QMKRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLAKVKPHRTF 486
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 487 RFNECVC 493
[19][TOP]
>UniRef100_UPI0000DA3DE9 PREDICTED: similar to polymerase (RNA) III (DNA directed)
polypeptide A, 155kDa n=2 Tax=Rattus norvegicus
RepID=UPI0000DA3DE9
Length = 1362
Score = 243 bits (620), Expect = 7e-63
Identities = 116/187 (62%), Positives = 147/187 (78%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GPD +PGANF++
Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVRNGPDVHPGANFIQQRHM 426
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H AKV PHRTF
Sbjct: 427 QMKRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLAKVKPHRTF 486
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 487 RFNECVC 493
[20][TOP]
>UniRef100_UPI00017B08B5 UPI00017B08B5 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B08B5
Length = 1391
Score = 243 bits (620), Expect = 7e-63
Identities = 113/187 (60%), Positives = 148/187 (79%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 309 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 368
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LTYPERV K N + + V GP+ +PGANF++
Sbjct: 369 TVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELMRKLVRNGPEVHPGANFIQNRYN 428
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
KRFL+YGNR+K+A++L G +VERH++DGD+VLFNRQPSLH++SIM+H A+V PHRTF
Sbjct: 429 QIKRFLKYGNREKIAQELRYGDIVERHMIDGDIVLFNRQPSLHKLSIMAHIARVKPHRTF 488
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 489 RFNECVC 495
[21][TOP]
>UniRef100_Q4S3H6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon
nigroviridis RepID=Q4S3H6_TETNG
Length = 1319
Score = 243 bits (620), Expect = 7e-63
Identities = 113/187 (60%), Positives = 148/187 (79%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 251 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 310
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LTYPERV K N + + V GP+ +PGANF++
Sbjct: 311 TVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELMRKLVRNGPEVHPGANFIQNRYN 370
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
KRFL+YGNR+K+A++L G +VERH++DGD+VLFNRQPSLH++SIM+H A+V PHRTF
Sbjct: 371 QIKRFLKYGNREKIAQELRYGDIVERHMIDGDIVLFNRQPSLHKLSIMAHIARVKPHRTF 430
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 431 RFNECVC 437
[22][TOP]
>UniRef100_UPI000194C79C PREDICTED: polymerase (RNA) III (DNA directed) polypeptide A,
155kDa n=1 Tax=Taeniopygia guttata RepID=UPI000194C79C
Length = 1390
Score = 242 bits (618), Expect = 1e-62
Identities = 113/187 (60%), Positives = 147/187 (78%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N + V GPD +PGANF++
Sbjct: 367 TVISPDPNLRIDEVAVPIHVAKILTFPEKVNKANINFMRKLVCNGPDVHPGANFIQQRHT 426
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
KRFL+YGNR+K+A++L G +VERHL+DGD+VLFNRQPSLH++SIM+H A+V PHRTF
Sbjct: 427 QMKRFLKYGNREKMAQELKFGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIARVKPHRTF 486
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 487 RFNECVC 493
[23][TOP]
>UniRef100_A4IHM8 DNA-directed RNA polymerase n=1 Tax=Xenopus (Silurana) tropicalis
RepID=A4IHM8_XENTR
Length = 1390
Score = 242 bits (617), Expect = 2e-62
Identities = 112/187 (59%), Positives = 148/187 (79%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 306 MEDWDFLQLQCALYINSELSGIPMNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 365
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LT+PE+V + N + + V GPD +PGANF++
Sbjct: 366 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNQANMQLMRKLVQNGPDVHPGANFIQQRHT 425
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
KRFL+YGNR+K+A++L G +VERHL+DGD+VLFNRQPSLH++SIM+H A+V PHRTF
Sbjct: 426 QMKRFLKYGNREKIAQELRFGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIARVKPHRTF 485
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 486 RFNECVC 492
[24][TOP]
>UniRef100_Q7TSI4 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=Q7TSI4_MOUSE
Length = 649
Score = 242 bits (617), Expect = 2e-62
Identities = 115/187 (61%), Positives = 147/187 (78%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GPD +PGANF++
Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVRNGPDVHPGANFIQQRHM 426
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H A+V PHRTF
Sbjct: 427 QMKRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPHRTF 486
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 487 RFNECVC 493
[25][TOP]
>UniRef100_B2RXC6 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=B2RXC6_MOUSE
Length = 1390
Score = 242 bits (617), Expect = 2e-62
Identities = 115/187 (61%), Positives = 147/187 (78%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GPD +PGANF++
Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVRNGPDVHPGANFIQQRHM 426
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H A+V PHRTF
Sbjct: 427 QMKRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPHRTF 486
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 487 RFNECVC 493
[26][TOP]
>UniRef100_UPI00004BFD05 PREDICTED: similar to polymerase (RNA) III (DNA directed)
polypeptide A, 155kDa n=1 Tax=Canis lupus familiaris
RepID=UPI00004BFD05
Length = 1390
Score = 241 bits (616), Expect = 2e-62
Identities = 115/187 (61%), Positives = 147/187 (78%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GP+ +PGANF++
Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVRNGPEVHPGANFIQQRHT 426
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H AKV PHRTF
Sbjct: 427 QMKRFLKYGNREKMAQELKYGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLAKVKPHRTF 486
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 487 RFNECVC 493
[27][TOP]
>UniRef100_UPI0000EB3E23 DNA-directed RNA polymerase III subunit RPC1 (EC 2.7.7.6) (RNA
polymerase III subunit C1) (DNA-directed RNA polymerase
III subunit A) (DNA-directed RNA polymerase III largest
subunit) (RPC155) (C160). n=1 Tax=Canis lupus familiaris
RepID=UPI0000EB3E23
Length = 1393
Score = 241 bits (616), Expect = 2e-62
Identities = 115/187 (61%), Positives = 147/187 (78%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GP+ +PGANF++
Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVRNGPEVHPGANFIQQRHT 426
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H AKV PHRTF
Sbjct: 427 QMKRFLKYGNREKMAQELKYGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLAKVKPHRTF 486
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 487 RFNECVC 493
[28][TOP]
>UniRef100_UPI00003AE23E polymerase (RNA) III (DNA directed) polypeptide A, 155kDa n=1
Tax=Gallus gallus RepID=UPI00003AE23E
Length = 1390
Score = 241 bits (616), Expect = 2e-62
Identities = 113/187 (60%), Positives = 147/187 (78%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N + V GPD +PGANF++
Sbjct: 367 TVISPDPNLRIDEVAVPIHVAKILTFPEKVNKANINFMRKLVRNGPDVHPGANFIQQRHT 426
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
KRFL+YGNR+K+A++L G +VERHL+DGD+VLFNRQPSLH++SIM+H A+V PHRTF
Sbjct: 427 QMKRFLKYGNREKMAQELKFGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIARVKPHRTF 486
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 487 RFNECVC 493
[29][TOP]
>UniRef100_A8PJK8 DNA-directed RNA polymerase n=1 Tax=Brugia malayi
RepID=A8PJK8_BRUMA
Length = 1404
Score = 241 bits (616), Expect = 2e-62
Identities = 117/184 (63%), Positives = 142/184 (77%), Gaps = 1/184 (0%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
W+ LQV+ A ++NS+ + LPP + RG +QRLKGK GRFRGNLSGKRVDFSGRTVI
Sbjct: 307 WDHLQVQCALYINSELSGLPPDMQPKRTTRGFTQRLKGKQGRFRGNLSGKRVDFSGRTVI 366
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGAN-FVETDDGNK 368
SPDPNLR+DQVG+P+ VA+ LT+PE V K N +R+ ++ G D +PGAN VE GNK
Sbjct: 367 SPDPNLRIDQVGVPVYVAKILTFPEIVNKANIERMRKLILNGDDIHPGANHIVERATGNK 426
Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
RFL+YGNR+ A L +G ++ERHL D DVVLFNRQPSLH+ISIMSH AK+VP RTFRFN
Sbjct: 427 RFLKYGNREITAAQLKVGDIIERHLDDNDVVLFNRQPSLHKISIMSHRAKIVPGRTFRFN 486
Query: 549 ECVC 560
EC C
Sbjct: 487 ECAC 490
[30][TOP]
>UniRef100_Q5A164 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=Q5A164_CANAL
Length = 1448
Score = 241 bits (616), Expect = 2e-62
Identities = 118/193 (61%), Positives = 152/193 (78%), Gaps = 7/193 (3%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPL------ASTAKPLRGISQRLKGKTGRFRGNLSGKR 164
M+ W++LQ+ A ++NSD+ N P L A ++KP+R QRLKGK GRFRGNLSGKR
Sbjct: 310 MEQWDYLQLSVAMYINSDSAN-PALSTGGGGAKSSKPIRAFCQRLKGKQGRFRGNLSGKR 368
Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344
VDFSGRTVISPDPNL++D+V +P RVA+ LTYPE+ T++N+K+L V+ GPD +PGAN+
Sbjct: 369 VDFSGRTVISPDPNLKIDEVAVPDRVAKVLTYPEKCTRYNKKKLQKLVVNGPDIHPGANY 428
Query: 345 V-ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521
V + ++ KR LR+G+R K+AK L +G VVERH+ DGDVVLFNRQPSLHR+SI+SH AK+
Sbjct: 429 VMKQNEPGKRNLRFGDRVKLAKTLQIGDVVERHIEDGDVVLFNRQPSLHRLSILSHYAKI 488
Query: 522 VPHRTFRFNECVC 560
P RTFR NECVC
Sbjct: 489 RPWRTFRLNECVC 501
[31][TOP]
>UniRef100_Q5A0Z3 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=Q5A0Z3_CANAL
Length = 1448
Score = 241 bits (616), Expect = 2e-62
Identities = 118/193 (61%), Positives = 152/193 (78%), Gaps = 7/193 (3%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPL------ASTAKPLRGISQRLKGKTGRFRGNLSGKR 164
M+ W++LQ+ A ++NSD+ N P L A ++KP+R QRLKGK GRFRGNLSGKR
Sbjct: 310 MEQWDYLQLSVAMYINSDSAN-PALSTGGGGAKSSKPIRAFCQRLKGKQGRFRGNLSGKR 368
Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344
VDFSGRTVISPDPNL++D+V +P RVA+ LTYPE+ T++N+K+L V+ GPD +PGAN+
Sbjct: 369 VDFSGRTVISPDPNLKIDEVAVPDRVAKVLTYPEKCTRYNKKKLQKLVVNGPDIHPGANY 428
Query: 345 V-ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521
V + ++ KR LR+G+R K+AK L +G VVERH+ DGDVVLFNRQPSLHR+SI+SH AK+
Sbjct: 429 VMKQNEPGKRNLRFGDRVKLAKTLQIGDVVERHIEDGDVVLFNRQPSLHRLSILSHYAKI 488
Query: 522 VPHRTFRFNECVC 560
P RTFR NECVC
Sbjct: 489 RPWRTFRLNECVC 501
[32][TOP]
>UniRef100_C4YGE6 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=C4YGE6_CANAL
Length = 1448
Score = 241 bits (616), Expect = 2e-62
Identities = 118/193 (61%), Positives = 152/193 (78%), Gaps = 7/193 (3%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPL------ASTAKPLRGISQRLKGKTGRFRGNLSGKR 164
M+ W++LQ+ A ++NSD+ N P L A ++KP+R QRLKGK GRFRGNLSGKR
Sbjct: 310 MEQWDYLQLSVAMYINSDSAN-PALSTGGGGAKSSKPIRAFCQRLKGKQGRFRGNLSGKR 368
Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344
VDFSGRTVISPDPNL++D+V +P RVA+ LTYPE+ T++N+K+L V+ GPD +PGAN+
Sbjct: 369 VDFSGRTVISPDPNLKIDEVAVPDRVAKVLTYPEKCTRYNKKKLQKLVVNGPDIHPGANY 428
Query: 345 V-ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521
V + ++ KR LR+G+R K+AK L +G VVERH+ DGDVVLFNRQPSLHR+SI+SH AK+
Sbjct: 429 VMKQNEPGKRNLRFGDRVKLAKTLQIGDVVERHIEDGDVVLFNRQPSLHRLSILSHYAKI 488
Query: 522 VPHRTFRFNECVC 560
P RTFR NECVC
Sbjct: 489 RPWRTFRLNECVC 501
[33][TOP]
>UniRef100_A3GEY3 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
RepID=A3GEY3_PICST
Length = 1448
Score = 241 bits (616), Expect = 2e-62
Identities = 118/194 (60%), Positives = 152/194 (78%), Gaps = 8/194 (4%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLAST-------AKPLRGISQRLKGKTGRFRGNLSGK 161
M+ W++LQ+ A ++NSD+ N L S+ +KP+RG QRLKGK GRFRGNLSGK
Sbjct: 310 MEQWDYLQLSVAMYINSDSANPALLPSSGGGGSKSSKPIRGFCQRLKGKQGRFRGNLSGK 369
Query: 162 RVDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGAN 341
RVDFSGRTVISPDPNL++D+V +P VA+ LTYPER T++NRK+L V+ GPD +PGAN
Sbjct: 370 RVDFSGRTVISPDPNLKIDEVAVPELVAKVLTYPERCTRYNRKKLQRLVVNGPDIHPGAN 429
Query: 342 FV-ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAK 518
+V + ++ KR LR+G+R K+AK+L +G +VERH+ DGDVVLFNRQPSLHR+SI+SH AK
Sbjct: 430 YVMKQNEQAKRNLRFGDRVKLAKNLQIGDLVERHIEDGDVVLFNRQPSLHRLSILSHYAK 489
Query: 519 VVPHRTFRFNECVC 560
+ P RTFR NECVC
Sbjct: 490 IRPWRTFRLNECVC 503
[34][TOP]
>UniRef100_Q5ZL98 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Gallus gallus
RepID=RPC1_CHICK
Length = 1390
Score = 241 bits (616), Expect = 2e-62
Identities = 113/187 (60%), Positives = 147/187 (78%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N + V GPD +PGANF++
Sbjct: 367 TVISPDPNLRIDEVAVPIHVAKILTFPEKVNKANINFMRKLVRNGPDVHPGANFIQQRHT 426
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
KRFL+YGNR+K+A++L G +VERHL+DGD+VLFNRQPSLH++SIM+H A+V PHRTF
Sbjct: 427 QMKRFLKYGNREKMAQELKFGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIARVKPHRTF 486
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 487 RFNECVC 493
[35][TOP]
>UniRef100_UPI00015A5DDB PREDICTED: im:7139382 n=1 Tax=Danio rerio RepID=UPI00015A5DDB
Length = 1390
Score = 241 bits (615), Expect = 3e-62
Identities = 113/187 (60%), Positives = 148/187 (79%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LTYPE+V K N + + V GP+ +PGANF++
Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANIELMRKLVRNGPEVHPGANFIQQRHM 426
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
KRFL+YGNR+K+A++L G VVERH++DGD+VLFNRQPSLH++SIM+H A+V PHRTF
Sbjct: 427 QMKRFLKYGNREKMAQELKFGDVVERHMIDGDIVLFNRQPSLHKLSIMAHIARVKPHRTF 486
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 487 RFNECVC 493
[36][TOP]
>UniRef100_UPI0000E22532 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide A,
155kDa n=1 Tax=Pan troglodytes RepID=UPI0000E22532
Length = 1349
Score = 241 bits (615), Expect = 3e-62
Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 266 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 325
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GP+ +PGANF++
Sbjct: 326 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVQNGPEVHPGANFIQQRHT 385
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H A+V PHRTF
Sbjct: 386 QMKRFLKYGNREKIAQELKYGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPHRTF 445
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 446 RFNECVC 452
[37][TOP]
>UniRef100_UPI000155D900 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide A,
155kDa n=1 Tax=Equus caballus RepID=UPI000155D900
Length = 1390
Score = 241 bits (614), Expect = 4e-62
Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GP+ +PGANF++
Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVQNGPEVHPGANFIQQRHT 426
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H A+V PHRTF
Sbjct: 427 QMKRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPHRTF 486
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 487 RFNECVC 493
[38][TOP]
>UniRef100_B9WF61 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
RepID=B9WF61_CANDC
Length = 1448
Score = 241 bits (614), Expect = 4e-62
Identities = 116/193 (60%), Positives = 152/193 (78%), Gaps = 7/193 (3%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPL------ASTAKPLRGISQRLKGKTGRFRGNLSGKR 164
M+ W++LQ+ A ++NSD+ N P L A ++KP+R QRLKGK GRFRGNLSGKR
Sbjct: 310 MEQWDYLQLSVAMYINSDSAN-PALSTGGGGAKSSKPIRAFCQRLKGKQGRFRGNLSGKR 368
Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344
VDFSGRTVISPDPNL++D+V +P RVA+ LTYPE+ T++N+K+L ++ GPD +PGAN+
Sbjct: 369 VDFSGRTVISPDPNLKIDEVAVPDRVAKVLTYPEKCTRYNKKKLQKLIVNGPDIHPGANY 428
Query: 345 V-ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521
V + ++ KR LR+G+R K+AK L +G +VERH+ DGDVVLFNRQPSLHR+SI+SH AK+
Sbjct: 429 VMKQNEPGKRNLRFGDRVKLAKTLQIGDIVERHIEDGDVVLFNRQPSLHRLSILSHYAKI 488
Query: 522 VPHRTFRFNECVC 560
P RTFR NECVC
Sbjct: 489 RPWRTFRLNECVC 501
[39][TOP]
>UniRef100_A8PGH2 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8PGH2_COPC7
Length = 1403
Score = 241 bits (614), Expect = 4e-62
Identities = 114/186 (61%), Positives = 145/186 (77%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ WE+LQ+ A ++NS+ +P KP+RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 301 MEQWEFLQLSVAMYINSELPGVPSQMGQ-KPIRGFVQRLKGKQGRFRGNLSGKRVDFSGR 359
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P RVA+ LTYPERVT HN + L A+ GPD +PGAN+V +
Sbjct: 360 TVISPDPNLRIDEVAVPERVAKILTYPERVTMHNIETLRQAIRNGPDVHPGANYVARGE- 418
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K+FL++GNR+ +A +L +G +VERH++DGD+VLFNRQPSLH++SIM H AK+ P RTFR
Sbjct: 419 TKKFLKFGNRQAIADNLAIGDIVERHVIDGDIVLFNRQPSLHKLSIMCHRAKIRPWRTFR 478
Query: 543 FNECVC 560
NECVC
Sbjct: 479 LNECVC 484
[40][TOP]
>UniRef100_A4IF62 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Bos taurus
RepID=RPC1_BOVIN
Length = 1390
Score = 241 bits (614), Expect = 4e-62
Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GP+ +PGANF++
Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVRNGPEVHPGANFIQQRHT 426
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H A+V PHRTF
Sbjct: 427 QMKRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPHRTF 486
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 487 RFNECVC 493
[41][TOP]
>UniRef100_UPI00017EFF90 PREDICTED: similar to polymerase (RNA) III (DNA directed)
polypeptide A, 155kDa n=1 Tax=Sus scrofa
RepID=UPI00017EFF90
Length = 1390
Score = 240 bits (613), Expect = 5e-62
Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GP+ +PGANF++
Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANITFLRKLVRNGPEVHPGANFIQQRHT 426
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H A+V PHRTF
Sbjct: 427 QMKRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPHRTF 486
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 487 RFNECVC 493
[42][TOP]
>UniRef100_B7Z6H4 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B7Z6H4_HUMAN
Length = 1369
Score = 240 bits (613), Expect = 5e-62
Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GP+ +PGANF++
Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVQNGPEVHPGANFIQQRHT 426
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H A+V PHRTF
Sbjct: 427 QMKRFLKYGNREKMAQELKYGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPHRTF 486
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 487 RFNECVC 493
[43][TOP]
>UniRef100_C5DY31 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS
732 RepID=C5DY31_ZYGRC
Length = 1458
Score = 240 bits (613), Expect = 5e-62
Identities = 118/191 (61%), Positives = 150/191 (78%), Gaps = 5/191 (2%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLAS----TAKPLRGISQRLKGKTGRFRGNLSGKRVD 170
M+ W++LQ+ A ++NSD+ N L+ KP+RG QRLKGK GRFRGNLSGKRVD
Sbjct: 313 MEHWDYLQLAVAMYINSDSVNPAILSGGTGGKVKPIRGFCQRLKGKQGRFRGNLSGKRVD 372
Query: 171 FSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-V 347
FSGRTVISPDPNL VD+V +P RVA+ LTYPERVT++N+ +L V+ GP+ YPGAN+ +
Sbjct: 373 FSGRTVISPDPNLSVDEVAVPDRVAKVLTYPERVTRYNKGKLQQLVVNGPNEYPGANYLL 432
Query: 348 ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVP 527
+ D+ +R LR+G+R K+AK+L +G +VERHL DGDVVLFNRQPSLHR+SI+SH AK+ P
Sbjct: 433 KKDEDARRNLRFGDRVKLAKNLRIGDLVERHLEDGDVVLFNRQPSLHRLSILSHYAKIRP 492
Query: 528 HRTFRFNECVC 560
RTFR NECVC
Sbjct: 493 WRTFRLNECVC 503
[44][TOP]
>UniRef100_O14802 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Homo sapiens
RepID=RPC1_HUMAN
Length = 1390
Score = 240 bits (613), Expect = 5e-62
Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GP+ +PGANF++
Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVQNGPEVHPGANFIQQRHT 426
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H A+V PHRTF
Sbjct: 427 QMKRFLKYGNREKMAQELKYGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPHRTF 486
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 487 RFNECVC 493
[45][TOP]
>UniRef100_Q6BI69 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Debaryomyces
hansenii RepID=RPC1_DEBHA
Length = 1457
Score = 240 bits (613), Expect = 5e-62
Identities = 115/193 (59%), Positives = 153/193 (79%), Gaps = 7/193 (3%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLAST------AKPLRGISQRLKGKTGRFRGNLSGKR 164
M+ W++LQ+ A ++NSD+ N L S+ +KP+RG QRLKGK GRFRGNLSGKR
Sbjct: 310 MEQWDYLQLSVAMYINSDSANPALLPSSGGGSKSSKPIRGFCQRLKGKQGRFRGNLSGKR 369
Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344
VDFSGRTVISPDPNL++D+V +P RVA+ LTYPE+ T++NRK+L ++ GP+ +PGAN+
Sbjct: 370 VDFSGRTVISPDPNLKIDEVAVPDRVAKVLTYPEKCTRYNRKKLQKLILSGPNVHPGANY 429
Query: 345 -VETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521
++ ++ KR LR+G+R K+AK+L +G VVERH+ DGD+VLFNRQPSLHR+SI+SH AK+
Sbjct: 430 LLKQNESAKRNLRFGDRVKLAKNLHIGDVVERHIEDGDIVLFNRQPSLHRLSILSHYAKI 489
Query: 522 VPHRTFRFNECVC 560
P RTFR NECVC
Sbjct: 490 RPWRTFRLNECVC 502
[46][TOP]
>UniRef100_C7GMM0 Rpo31p n=1 Tax=Saccharomyces cerevisiae JAY291 RepID=C7GMM0_YEAS2
Length = 1460
Score = 240 bits (612), Expect = 6e-62
Identities = 116/193 (60%), Positives = 151/193 (78%), Gaps = 7/193 (3%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTA------KPLRGISQRLKGKTGRFRGNLSGKR 164
M+ W++LQ+ A ++NSD+ N L ++ KP+RG QRLKGK GRFRGNLSGKR
Sbjct: 313 MEHWDYLQLTVAMYINSDSVNPAMLPGSSNGGGKVKPIRGFCQRLKGKQGRFRGNLSGKR 372
Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344
VDFSGRTVISPDPNL +D+V +P RVA+ LTYPE+VT++NR +L ++ GP+ +PGAN+
Sbjct: 373 VDFSGRTVISPDPNLSIDEVAVPDRVAKVLTYPEKVTRYNRHKLQELIVNGPNVHPGANY 432
Query: 345 -VETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521
++ ++ +R LRYG+R K+AK+L +G VVERHL DGDVVLFNRQPSLHR+SI+SH AK+
Sbjct: 433 LLKRNEDARRNLRYGDRMKLAKNLQIGDVVERHLEDGDVVLFNRQPSLHRLSILSHYAKI 492
Query: 522 VPHRTFRFNECVC 560
P RTFR NECVC
Sbjct: 493 RPWRTFRLNECVC 505
[47][TOP]
>UniRef100_B3LJF9 DNA-directed RNA polymerase n=3 Tax=Saccharomyces cerevisiae
RepID=B3LJF9_YEAS1
Length = 1460
Score = 240 bits (612), Expect = 6e-62
Identities = 116/193 (60%), Positives = 151/193 (78%), Gaps = 7/193 (3%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTA------KPLRGISQRLKGKTGRFRGNLSGKR 164
M+ W++LQ+ A ++NSD+ N L ++ KP+RG QRLKGK GRFRGNLSGKR
Sbjct: 313 MEHWDYLQLTVAMYINSDSVNPAMLPGSSNGGGKVKPIRGFCQRLKGKQGRFRGNLSGKR 372
Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344
VDFSGRTVISPDPNL +D+V +P RVA+ LTYPE+VT++NR +L ++ GP+ +PGAN+
Sbjct: 373 VDFSGRTVISPDPNLSIDEVAVPDRVAKVLTYPEKVTRYNRHKLQELIVNGPNVHPGANY 432
Query: 345 -VETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521
++ ++ +R LRYG+R K+AK+L +G VVERHL DGDVVLFNRQPSLHR+SI+SH AK+
Sbjct: 433 LLKRNEDARRNLRYGDRMKLAKNLQIGDVVERHLEDGDVVLFNRQPSLHRLSILSHYAKI 492
Query: 522 VPHRTFRFNECVC 560
P RTFR NECVC
Sbjct: 493 RPWRTFRLNECVC 505
[48][TOP]
>UniRef100_P04051 DNA-directed RNA polymerase III subunit RPC1 n=2 Tax=Saccharomyces
cerevisiae RepID=RPC1_YEAST
Length = 1460
Score = 240 bits (612), Expect = 6e-62
Identities = 116/193 (60%), Positives = 151/193 (78%), Gaps = 7/193 (3%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTA------KPLRGISQRLKGKTGRFRGNLSGKR 164
M+ W++LQ+ A ++NSD+ N L ++ KP+RG QRLKGK GRFRGNLSGKR
Sbjct: 313 MEHWDYLQLTVAMYINSDSVNPAMLPGSSNGGGKVKPIRGFCQRLKGKQGRFRGNLSGKR 372
Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344
VDFSGRTVISPDPNL +D+V +P RVA+ LTYPE+VT++NR +L ++ GP+ +PGAN+
Sbjct: 373 VDFSGRTVISPDPNLSIDEVAVPDRVAKVLTYPEKVTRYNRHKLQELIVNGPNVHPGANY 432
Query: 345 -VETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521
++ ++ +R LRYG+R K+AK+L +G VVERHL DGDVVLFNRQPSLHR+SI+SH AK+
Sbjct: 433 LLKRNEDARRNLRYGDRMKLAKNLQIGDVVERHLEDGDVVLFNRQPSLHRLSILSHYAKI 492
Query: 522 VPHRTFRFNECVC 560
P RTFR NECVC
Sbjct: 493 RPWRTFRLNECVC 505
[49][TOP]
>UniRef100_UPI0000F2AF25 PREDICTED: similar to Proteasome (prosome, macropain) subunit,
alpha type, 2 n=1 Tax=Monodelphis domestica
RepID=UPI0000F2AF25
Length = 1390
Score = 239 bits (611), Expect = 8e-62
Identities = 113/187 (60%), Positives = 147/187 (78%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N + V GP+ +PGANF++
Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFMRKLVRNGPEVHPGANFIQQRHM 426
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H A+V PHRTF
Sbjct: 427 QMKRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPHRTF 486
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 487 RFNECVC 493
[50][TOP]
>UniRef100_UPI0000612BF9 UPI0000612BF9 related cluster n=1 Tax=Bos taurus
RepID=UPI0000612BF9
Length = 1392
Score = 239 bits (611), Expect = 8e-62
Identities = 114/189 (60%), Positives = 147/189 (77%), Gaps = 3/189 (1%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 307 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 366
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVE---T 353
TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N L V GP+ +PGANF++ T
Sbjct: 367 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVRNGPEVHPGANFIQQRHT 426
Query: 354 DDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHR 533
RFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H A+V PHR
Sbjct: 427 QMKRLRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPHR 486
Query: 534 TFRFNECVC 560
TFRFNECVC
Sbjct: 487 TFRFNECVC 495
[51][TOP]
>UniRef100_UPI0001554E8D PREDICTED: similar to Polymerase (RNA) III (DNA directed)
polypeptide A, 155kDa n=1 Tax=Ornithorhynchus anatinus
RepID=UPI0001554E8D
Length = 1382
Score = 239 bits (610), Expect = 1e-61
Identities = 113/187 (60%), Positives = 147/187 (78%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 299 MEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 358
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LT+PE+V K N + V GP+ +PGANF++
Sbjct: 359 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANISFMRKLVRNGPEVHPGANFIQQRHM 418
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
KRFL+YGNR+K+A++L G +VERHL+DGDVVLFNRQPSLH++SIM+H A+V PHRTF
Sbjct: 419 QMKRFLKYGNREKMAQELKYGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPHRTF 478
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 479 RFNECVC 485
[52][TOP]
>UniRef100_UPI00003BE6A5 hypothetical protein DEHA0G13849g n=1 Tax=Debaryomyces hansenii
CBS767 RepID=UPI00003BE6A5
Length = 1457
Score = 239 bits (609), Expect = 1e-61
Identities = 115/193 (59%), Positives = 153/193 (79%), Gaps = 7/193 (3%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLAST------AKPLRGISQRLKGKTGRFRGNLSGKR 164
M+ W++LQ+ A ++NSD+ N L S+ +KP+RG QRLKGK GRFRGNLSGKR
Sbjct: 310 MEQWDYLQLSVAMYINSDSANPALLPSSGGGSKSSKPIRGFCQRLKGKQGRFRGNLSGKR 369
Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344
VDFSGRTVISPDPNL++D+V +P RVA+ LTYPE+ T++NRK+L ++ GP+ +PGAN+
Sbjct: 370 VDFSGRTVISPDPNLKIDEVAVPDRVAKVLTYPEKCTRYNRKKLQKLILSGPNVHPGANY 429
Query: 345 -VETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521
++ ++ KR LR+G+R K+AK+L +G VVERH+ DGD+VLFNRQPSLHR+SI+SH AK+
Sbjct: 430 LLKQNELAKRNLRFGDRVKLAKNLHIGDVVERHIEDGDIVLFNRQPSLHRLSILSHYAKI 489
Query: 522 VPHRTFRFNECVC 560
P RTFR NECVC
Sbjct: 490 RPWRTFRLNECVC 502
[53][TOP]
>UniRef100_C5DJG5 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS
6340 RepID=C5DJG5_LACTC
Length = 1460
Score = 239 bits (609), Expect = 1e-61
Identities = 118/192 (61%), Positives = 151/192 (78%), Gaps = 6/192 (3%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATN--LPPLASTA---KPLRGISQRLKGKTGRFRGNLSGKRV 167
M+ W++LQ+ A ++NSD+ N + P ST KP+RG QRLKGK GRFRGNLSGKRV
Sbjct: 313 MEQWDYLQLAVAMYINSDSVNPAMMPGGSTGGKTKPIRGFCQRLKGKQGRFRGNLSGKRV 372
Query: 168 DFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF- 344
DFSGRTV+SPDPNL +D+V +P RVA+ LTYPE VT++N+++L VI GP+ +PGAN+
Sbjct: 373 DFSGRTVVSPDPNLSIDEVAVPDRVAKVLTYPEMVTRYNKQKLQQLVINGPNEHPGANYL 432
Query: 345 VETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVV 524
++ D+ +R LRYG+R K+A++L G VVERHL DGDVVLFNRQPSLHR+SI+SH AK+
Sbjct: 433 LKKDEEARRNLRYGDRMKLARNLQYGDVVERHLEDGDVVLFNRQPSLHRLSILSHYAKIR 492
Query: 525 PHRTFRFNECVC 560
P RTFR NECVC
Sbjct: 493 PWRTFRLNECVC 504
[54][TOP]
>UniRef100_C1MN08 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MN08_9CHLO
Length = 1591
Score = 238 bits (608), Expect = 2e-61
Identities = 112/188 (59%), Positives = 144/188 (76%), Gaps = 1/188 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLP-PLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSG 179
M+ W++LQV+ A + NS+ L KPLRG QRLKGK GRFRGNLSGKRVDFSG
Sbjct: 322 MENWDFLQVQIAMYFNSELPGLSLQYQGPGKPLRGFVQRLKGKQGRFRGNLSGKRVDFSG 381
Query: 180 RTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDD 359
RTVISPDPNLR+D+VG+P+ +A+ +TYPE ++KHN + + V G + +PGANFV
Sbjct: 382 RTVISPDPNLRIDEVGVPMHIAKLMTYPEVISKHNIEHIRERVRNGMNKHPGANFVRFKS 441
Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
G ++L+YG+R++VA +L G VVERHL DGDV+LFNRQPSLH++SIM+H AK++P RT
Sbjct: 442 GGTQYLKYGDRRRVASELKFGDVVERHLNDGDVLLFNRQPSLHKMSIMAHRAKIMPWRTL 501
Query: 540 RFNECVCA 563
RFNECVCA
Sbjct: 502 RFNECVCA 509
[55][TOP]
>UniRef100_Q6CMC7 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
RepID=Q6CMC7_KLULA
Length = 1457
Score = 238 bits (607), Expect = 2e-61
Identities = 118/191 (61%), Positives = 150/191 (78%), Gaps = 5/191 (2%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATN---LPPLAST-AKPLRGISQRLKGKTGRFRGNLSGKRVD 170
M+ W++LQ+ A ++NSD+ N LP + T +KP+RG QRLKGK GRFRGNLSGKRVD
Sbjct: 313 MEQWDYLQLAVAMYINSDSVNPSMLPGSSGTKSKPIRGFCQRLKGKQGRFRGNLSGKRVD 372
Query: 171 FSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-V 347
FSGRTVISPDPNL +D+V +P RVA+ LTYPE+VT++N+ +L VI GP +PGAN+ +
Sbjct: 373 FSGRTVISPDPNLSIDEVAVPDRVAKILTYPEKVTRYNKHKLQQLVINGPKVHPGANYLL 432
Query: 348 ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVP 527
+ ++ +R LRYG+R K+AK L G VVERH+ DGDVVLFNRQPSLHR+SI+SH AK+ P
Sbjct: 433 KKNEDARRNLRYGDRVKLAKQLQYGDVVERHIEDGDVVLFNRQPSLHRLSILSHYAKIRP 492
Query: 528 HRTFRFNECVC 560
RTFR NECVC
Sbjct: 493 WRTFRLNECVC 503
[56][TOP]
>UniRef100_A5E7R0 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
RepID=A5E7R0_LODEL
Length = 1450
Score = 238 bits (607), Expect = 2e-61
Identities = 114/197 (57%), Positives = 154/197 (78%), Gaps = 11/197 (5%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATN---LPPL-------ASTAKPLRGISQRLKGKTGRFRGNL 152
M+ W++LQ+ A ++NSD+ N +P + + ++KP+RG QRLKGK GRFRGNL
Sbjct: 311 MEQWDYLQLSVAMYINSDSANPALIPSVGGGGGGGSKSSKPIRGFCQRLKGKQGRFRGNL 370
Query: 153 SGKRVDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYP 332
SGKRVDFSGRTVISPDPNL++D+V +P RVA+ LTYPE+ T++N+++L +I GPD +P
Sbjct: 371 SGKRVDFSGRTVISPDPNLKIDEVAVPDRVAKVLTYPEKCTRYNKRKLQQLIINGPDHHP 430
Query: 333 GANFVE-TDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSH 509
GAN+V+ ++ KR LR+G+R K+A+ L +G +VERH+ DGDVVLFNRQPSLHR+SI+SH
Sbjct: 431 GANYVQKQNEPGKRNLRFGDRHKLARSLQVGDLVERHIEDGDVVLFNRQPSLHRLSILSH 490
Query: 510 SAKVVPHRTFRFNECVC 560
AK+ P RTFR NECVC
Sbjct: 491 YAKIRPWRTFRLNECVC 507
[57][TOP]
>UniRef100_Q18566 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis elegans
RepID=Q18566_CAEEL
Length = 1400
Score = 238 bits (606), Expect = 3e-61
Identities = 114/184 (61%), Positives = 141/184 (76%), Gaps = 1/184 (0%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
WE LQ++ A ++NS+ + LPP + +R +QRLKGK GRFRGNL GKRVDFSGRTVI
Sbjct: 306 WEHLQIQCALYINSEMSGLPPDMQPKRAMRAFTQRLKGKQGRFRGNLCGKRVDFSGRTVI 365
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-VETDDGNK 368
SPDPNLR+DQVG+P+ VA TLT+PE V N +++ VI G D +PGAN+ VE GNK
Sbjct: 366 SPDPNLRIDQVGVPIHVAMTLTFPEIVNASNIEKMRQLVINGSDVHPGANYLVEKKTGNK 425
Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
+ L+YG R ++AK+L +G +ERHL D DVVLFNRQPSLH+ISIMSH AKV+P RTFRFN
Sbjct: 426 KLLKYGKRDELAKNLRMGDTIERHLDDNDVVLFNRQPSLHKISIMSHRAKVMPGRTFRFN 485
Query: 549 ECVC 560
EC C
Sbjct: 486 ECAC 489
[58][TOP]
>UniRef100_UPI000022105F Hypothetical protein CBG05787 n=1 Tax=Caenorhabditis briggsae AF16
RepID=UPI000022105F
Length = 1402
Score = 237 bits (604), Expect = 5e-61
Identities = 113/184 (61%), Positives = 142/184 (77%), Gaps = 1/184 (0%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
WE LQ++ A ++NS+ + LPP + +R +QRLKGK GRFRGNL GKRVDFSGRTVI
Sbjct: 306 WEHLQIQCALYINSEMSGLPPDMQPKRAMRAFTQRLKGKQGRFRGNLCGKRVDFSGRTVI 365
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-VETDDGNK 368
SPDPNLR+DQVG+P+ VA TLT+PE V N ++ ++ G D +PGAN+ V+ G+K
Sbjct: 366 SPDPNLRIDQVGVPVHVAMTLTFPEIVNASNIDKMRKLIVNGSDVHPGANYLVDKKTGHK 425
Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
+ L+YGNR+++AK+L LG VERHL D DVVLFNRQPSLH+ISIMSH AKV+P RTFRFN
Sbjct: 426 KLLKYGNREELAKNLRLGDTVERHLDDNDVVLFNRQPSLHKISIMSHRAKVMPGRTFRFN 485
Query: 549 ECVC 560
EC C
Sbjct: 486 ECAC 489
[59][TOP]
>UniRef100_UPI0000E48917 PREDICTED: similar to RNA polymerase III largest subunit, partial
n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48917
Length = 427
Score = 236 bits (601), Expect = 1e-60
Identities = 112/187 (59%), Positives = 142/187 (75%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ+ A ++NS+ + LP KP RG QRLKGK GRFRGNLSGKRVD+S R
Sbjct: 33 MEDWDFLQLACALYINSETSGLPLNMQPKKPTRGFCQRLKGKQGRFRGNLSGKRVDYSSR 92
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFV-ETDD 359
TVISPDPNLR+D+V +P VA+ LTYPE+VTK N + V+ G D +PGANF+ +
Sbjct: 93 TVISPDPNLRIDEVAVPELVAKLLTYPEKVTKSNMALMRKLVMNGCDAHPGANFIHQRHT 152
Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
NK FL+YGNR+K+A++L G VERHL+DGD+VLFNRQPSLH++SIM+H A+V P RTF
Sbjct: 153 QNKMFLKYGNRQKMAQELKYGDTVERHLIDGDIVLFNRQPSLHKLSIMAHKARVKPFRTF 212
Query: 540 RFNECVC 560
RFN CVC
Sbjct: 213 RFNACVC 219
[60][TOP]
>UniRef100_UPI0000D57400 PREDICTED: similar to AGAP004703-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D57400
Length = 1390
Score = 236 bits (601), Expect = 1e-60
Identities = 113/186 (60%), Positives = 145/186 (77%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
+GW++LQ++ A ++NS+ + +P KP RG+ QRLKGK GRFRGNLSGKRVDFS RT
Sbjct: 318 EGWDFLQLQTALYINSELSGIPLAMMPKKPGRGLVQRLKGKQGRFRGNLSGKRVDFSSRT 377
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFV-ETDDG 362
VISPDPNL++DQVG+PL +A+ LT+PERV N + VI GPD +PGAN+V +
Sbjct: 378 VISPDPNLQIDQVGVPLHIAKILTFPERVIHANIDVMRQLVINGPDKWPGANYVQQKGSA 437
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K+FL+YGNR+K+A++L LG +VERHL + DVVLFNRQPSLH++SIM+H KV HRTFR
Sbjct: 438 FKKFLKYGNREKLAQELKLGDLVERHLHNDDVVLFNRQPSLHKLSIMAHRTKVHQHRTFR 497
Query: 543 FNECVC 560
FNECVC
Sbjct: 498 FNECVC 503
[61][TOP]
>UniRef100_Q6CB20 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6CB20_YARLI
Length = 1483
Score = 236 bits (601), Expect = 1e-60
Identities = 118/187 (63%), Positives = 147/187 (78%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ WE LQ+ A ++NSD T P S +KP+R ++QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 311 MEQWELLQLAVAVYINSD-TPQGPGQSASKPIRALTQRLKGKQGRFRGNLSGKRVDFSGR 369
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFV-ETDD 359
TVISPDPNLR+DQV +P RVA+ LTYPERVT HN ++L VI GP +PGAN++ + +
Sbjct: 370 TVISPDPNLRIDQVAVPDRVAKILTYPERVTSHNIEKLRNLVITGPSQHPGANYLFKKGE 429
Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
+R LR+G+R K+A+ L +G VVERHL DGDVVLFNRQPSLHR+SI++H A++ P RTF
Sbjct: 430 SLRRNLRFGDRAKIAERLEIGDVVERHLEDGDVVLFNRQPSLHRLSILAHFAQIRPWRTF 489
Query: 540 RFNECVC 560
R NECVC
Sbjct: 490 RLNECVC 496
[62][TOP]
>UniRef100_C4Y380 DNA-directed RNA polymerase n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4Y380_CLAL4
Length = 1491
Score = 236 bits (601), Expect = 1e-60
Identities = 114/195 (58%), Positives = 151/195 (77%), Gaps = 9/195 (4%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPL--------ASTAKPLRGISQRLKGKTGRFRGNLSG 158
M+ W++LQ+ A ++NSD+ N L + ++KP+RG QRLKGK GRFRGNLSG
Sbjct: 343 MEQWDYLQLSVAMYINSDSANPALLPGGMGGSGSKSSKPIRGFCQRLKGKQGRFRGNLSG 402
Query: 159 KRVDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGA 338
KRVDFSGRTVISPDPNLR+D+V +P RVA+ LTYPE+ T++NR++L ++ GP +PGA
Sbjct: 403 KRVDFSGRTVISPDPNLRIDEVAVPDRVAKILTYPEKCTRYNRQKLQKLILNGPTVHPGA 462
Query: 339 NFV-ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSA 515
N+V + ++ KR L++G+R K+AK L +G +VERH+ DGDVVLFNRQPSLHR+SI+SH A
Sbjct: 463 NYVLKQNEVAKRNLKFGDRVKLAKTLRIGDIVERHIEDGDVVLFNRQPSLHRLSILSHYA 522
Query: 516 KVVPHRTFRFNECVC 560
K+ P RTFR NECVC
Sbjct: 523 KIRPWRTFRLNECVC 537
[63][TOP]
>UniRef100_C1E5P6 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1E5P6_9CHLO
Length = 1479
Score = 235 bits (599), Expect = 2e-60
Identities = 110/187 (58%), Positives = 144/187 (77%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSG 179
M+ W++LQ++ A ++NS+ L KPLRG QRLKGK GRFRGNLSGKRVDFSG
Sbjct: 322 MENWDFLQIQCAMYINSELPGLSAQYQGPGKPLRGFVQRLKGKQGRFRGNLSGKRVDFSG 381
Query: 180 RTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDD 359
RTVISPDPNLR+D+VG+P+ +A+ +TYPE V++HN + + V G + +PGANFV
Sbjct: 382 RTVISPDPNLRIDEVGVPMHIAKMMTYPEVVSRHNIEMIRERVRNGMNKHPGANFVRFKS 441
Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
G ++L+YG+R++VA +L G VVERHL DGDV+LFNRQPSLH++SIM+H A+V+P RT
Sbjct: 442 GGTQYLKYGDRRRVASELKYGDVVERHLHDGDVLLFNRQPSLHKMSIMAHRARVMPWRTL 501
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 502 RFNECVC 508
[64][TOP]
>UniRef100_B7G2E6 DNA-directed RNA polymerase n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B7G2E6_PHATR
Length = 1281
Score = 234 bits (596), Expect = 4e-60
Identities = 116/189 (61%), Positives = 149/189 (78%), Gaps = 2/189 (1%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLP-PLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSG 179
M+ W++LQV+ A+++N + L P+ S KP+RG+ QRLKGK GRFRGNLSGKRVDFS
Sbjct: 267 MEEWDFLQVQVAQYINGEMPGLQRPIGS--KPMRGLCQRLKGKQGRFRGNLSGKRVDFSA 324
Query: 180 RTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDD 359
RTVISPDPNLRVDQVG+P RVA+T+TYPERV+++N ++L V GPD +PGAN + D
Sbjct: 325 RTVISPDPNLRVDQVGVPERVAKTMTYPERVSRYNIEKLRQRVRNGPDVHPGANLIRMKD 384
Query: 360 GN-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536
G+ + L +G+R+ VAK+L G VVERH+ D DVVLFNRQPSLH++SIM+H AKV+ +T
Sbjct: 385 GSFVKSLSFGDRELVAKNLRYGDVVERHMEDDDVVLFNRQPSLHKVSIMAHRAKVMEWKT 444
Query: 537 FRFNECVCA 563
FRFN CVCA
Sbjct: 445 FRFNTCVCA 453
[65][TOP]
>UniRef100_UPI00019259E0 PREDICTED: similar to predicted protein, partial n=1 Tax=Hydra
magnipapillata RepID=UPI00019259E0
Length = 534
Score = 233 bits (595), Expect = 6e-60
Identities = 114/187 (60%), Positives = 139/187 (74%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++N + + +P K RG QRL GK GRFRGNLSGKRVDFSGR
Sbjct: 307 MEDWDFLQLQCALYINGEMSGIPMNMQPKKATRGFVQRLNGKQGRFRGNLSGKRVDFSGR 366
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFV-ETDD 359
TVISPDPNLR+DQV +P+ VA+ LT+PE V K N K + V G D +PGANFV +
Sbjct: 367 TVISPDPNLRIDQVAVPIHVAKVLTFPEPVNKFNIKLMKELVKNGADIHPGANFVISKNT 426
Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
G KR+L+YGNR VA +L G +VERHL+D DVVLFNRQPSLHR+SIM+H A V PHRTF
Sbjct: 427 GIKRYLKYGNRALVANELRYGDIVERHLMDNDVVLFNRQPSLHRLSIMAHYATVRPHRTF 486
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 487 RFNECVC 493
[66][TOP]
>UniRef100_Q756K2 DNA-directed RNA polymerase n=1 Tax=Eremothecium gossypii
RepID=Q756K2_ASHGO
Length = 1459
Score = 232 bits (592), Expect = 1e-59
Identities = 114/193 (59%), Positives = 149/193 (77%), Gaps = 7/193 (3%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPL------ASTAKPLRGISQRLKGKTGRFRGNLSGKR 164
M+ W++LQ+ A ++NSD+ N P L KP+RG QRLKGK GRFRGNLSGKR
Sbjct: 313 MEQWDYLQMAVAMYINSDSVN-PALMPGGNGGGKTKPIRGFCQRLKGKQGRFRGNLSGKR 371
Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344
VDFSGRTVISPDPNL +D+V +P RVA+ LT+PE+VT++N+ +L ++ G + +PGAN+
Sbjct: 372 VDFSGRTVISPDPNLSIDEVAVPDRVAKVLTFPEKVTRYNKHKLQQLIVNGANVHPGANY 431
Query: 345 -VETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521
++ ++ +R LRYG+R K+AK+L +G VVERHL DGDVVLFNRQPSLHR+SI+SH AK+
Sbjct: 432 LLKKNEEARRNLRYGDRIKLAKNLQIGDVVERHLEDGDVVLFNRQPSLHRLSILSHYAKI 491
Query: 522 VPHRTFRFNECVC 560
P RTFR NECVC
Sbjct: 492 RPWRTFRLNECVC 504
[67][TOP]
>UniRef100_A4RTE2 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus
CCE9901 RepID=A4RTE2_OSTLU
Length = 1395
Score = 232 bits (591), Expect = 2e-59
Identities = 108/187 (57%), Positives = 141/187 (75%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLP-PLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSG 179
M+ W++LQ++ A ++NS+ L KPLRG QRLKGK GRFRGNLSGKRVDFS
Sbjct: 320 MENWDFLQIQCAMYINSELPGLSLQYQGPGKPLRGFVQRLKGKQGRFRGNLSGKRVDFSA 379
Query: 180 RTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDD 359
RTVISPDPNLR+D+VG+P+ +A+T+TYPE V KHN L V G +PGANFV+
Sbjct: 380 RTVISPDPNLRIDEVGVPIHIAKTMTYPEVVNKHNMVMLRERVRNGMAKHPGANFVKFAS 439
Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
G ++L+YG+R+K+A +L G +VERHL DGD++LFNRQPSLH++SIM+H A+++ RT
Sbjct: 440 GGMQYLKYGDRRKIASELKFGDIVERHLHDGDILLFNRQPSLHKMSIMAHKARIMECRTL 499
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 500 RFNECVC 506
[68][TOP]
>UniRef100_Q6FKG9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
RepID=Q6FKG9_CANGA
Length = 1459
Score = 231 bits (590), Expect = 2e-59
Identities = 116/193 (60%), Positives = 150/193 (77%), Gaps = 7/193 (3%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATN--LPPLASTA----KPLRGISQRLKGKTGRFRGNLSGKR 164
M+ W++LQ+ A ++NSD+ N + P +ST KP+RG QRLKGK GRFRGNLSGKR
Sbjct: 313 MEHWDYLQMTVAMYINSDSINPAMLPGSSTGGGKVKPIRGFCQRLKGKQGRFRGNLSGKR 372
Query: 165 VDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF 344
VDFSGRTVISPDPNL +D+V +P VA+ LT+PE+VT++N K+L V GP+ +PGAN+
Sbjct: 373 VDFSGRTVISPDPNLSIDEVAVPQLVAKVLTFPEKVTRYNIKKLRQLVQNGPNVHPGANY 432
Query: 345 -VETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521
++ ++ +R LRYG+R+K+A +L G VVERHL DGDVVLFNRQPSLHR+SI+SH AK+
Sbjct: 433 LLKKNEEARRNLRYGDRQKLANNLQYGDVVERHLEDGDVVLFNRQPSLHRLSILSHYAKI 492
Query: 522 VPHRTFRFNECVC 560
P RTFR NECVC
Sbjct: 493 RPWRTFRLNECVC 505
[69][TOP]
>UniRef100_B4MT76 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4MT76_DROWI
Length = 1381
Score = 230 bits (587), Expect = 5e-59
Identities = 111/186 (59%), Positives = 141/186 (75%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
+ W++LQ+ A + +S+ + +P + K +RGI QRLKGK GRFRGNLSGKRVDFSGRT
Sbjct: 307 EDWDFLQLHVALYFHSEISGIPLNMAPKKTMRGIVQRLKGKQGRFRGNLSGKRVDFSGRT 366
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365
VISPDPNL ++QVG+P+RVAR LTYPERV N + + V GP +PGAN+V+ +
Sbjct: 367 VISPDPNLMINQVGVPVRVARILTYPERVNPANIRHMKQLVRNGPSLHPGANYVQQRGSS 426
Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K++L YGNR+KVA++L G +VERHL D D+VLFNRQPSLH++SIM H AKV P RTFR
Sbjct: 427 FKKYLAYGNREKVAQELKCGDIVERHLRDDDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 486
Query: 543 FNECVC 560
FNEC C
Sbjct: 487 FNECTC 492
[70][TOP]
>UniRef100_B0WFY1 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
RepID=B0WFY1_CULQU
Length = 1303
Score = 229 bits (585), Expect = 8e-59
Identities = 112/186 (60%), Positives = 137/186 (73%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
+ W++LQ+ A + NS+ + +P KP RGI QRLKGK GRFRGNLSGKRVDFS RT
Sbjct: 310 EDWDYLQLHCALYFNSELSGIPLSLMPKKPTRGIVQRLKGKQGRFRGNLSGKRVDFSART 369
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFV-ETDDG 362
VISPDPNL + QVG+P RVA+ LT+PERV N R+ + G + +PGAN+V +
Sbjct: 370 VISPDPNLMIHQVGVPDRVAKILTFPERVNTANINRMRQLIKNGTEKHPGANYVQQKGSA 429
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K++L YGNR KVA+DL G +VERHL+DGDVVLFNRQPSLH++SIM H AKV P RTFR
Sbjct: 430 FKKYLAYGNRDKVAQDLKCGDIVERHLMDGDVVLFNRQPSLHKLSIMCHVAKVQPQRTFR 489
Query: 543 FNECVC 560
FNEC C
Sbjct: 490 FNECAC 495
[71][TOP]
>UniRef100_Q7PMU6 DNA-directed RNA polymerase n=1 Tax=Anopheles gambiae
RepID=Q7PMU6_ANOGA
Length = 1379
Score = 229 bits (584), Expect = 1e-58
Identities = 111/186 (59%), Positives = 137/186 (73%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
+ W++LQ+ A + NS+ + +P KP RGI QRLKGK GRFRGNLSGKRVDFS RT
Sbjct: 311 EDWDYLQLHCALYFNSELSGIPLSLMPKKPTRGIVQRLKGKQGRFRGNLSGKRVDFSART 370
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFV-ETDDG 362
VISPDPNL + QVG+P RVA+ LT+PE+V N R+ + G + +PGAN+V +
Sbjct: 371 VISPDPNLMIHQVGVPDRVAKILTFPEKVNSANITRMRQLIRNGTEKHPGANYVQQKGSA 430
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K++L YGNR KVA+DL G +VERHL+DGDVVLFNRQPSLH++SIM H AKV P RTFR
Sbjct: 431 FKKYLAYGNRDKVAQDLKCGDIVERHLIDGDVVLFNRQPSLHKLSIMCHVAKVQPQRTFR 490
Query: 543 FNECVC 560
FNEC C
Sbjct: 491 FNECAC 496
[72][TOP]
>UniRef100_A8Q6K6 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
RepID=A8Q6K6_MALGO
Length = 1376
Score = 229 bits (584), Expect = 1e-58
Identities = 113/189 (59%), Positives = 145/189 (76%), Gaps = 2/189 (1%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
++ W++LQ+ A ++NS+ +PP+ S KP+RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 284 VEQWDFLQLSVALYINSEMPGVPPM-SGHKPIRGFCQRLKGKQGRFRGNLSGKRVDFSGR 342
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-VETDD 359
TVISPDPNL +D++ +P RVA+ LTYPERV HN + + AV G DT+PGAN+ V D
Sbjct: 343 TVISPDPNLAIDEIAVPERVAKILTYPERVFAHNIEAMRQAVRNGTDTHPGANYHVNGRD 402
Query: 360 GNKRFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536
G KRFL++ G R +A +L +G +VERH+ DGD+VLFNRQPSLH++SIM H AK+ P RT
Sbjct: 403 GFKRFLKFPGMRDDIAANLRVGDIVERHIRDGDIVLFNRQPSLHKLSIMCHRAKIRPWRT 462
Query: 537 FRFNECVCA 563
FR NECVC+
Sbjct: 463 FRLNECVCS 471
[73][TOP]
>UniRef100_UPI00019836CE PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI00019836CE
Length = 1383
Score = 229 bits (583), Expect = 1e-58
Identities = 105/184 (57%), Positives = 138/184 (75%)
Frame = +3
Query: 9 GWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTV 188
GW++LQ+E A+++NSD +P A+PL G QRLKGK GRFRGNLSGKRV+++GRTV
Sbjct: 308 GWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTV 367
Query: 189 ISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNK 368
ISPDPNL++ +V IP+ +A+ L+YPERV+ HN ++L ++ GP YPGA + DG+
Sbjct: 368 ISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRYPDGSM 427
Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
R L + RK+ A +L G +VERHL DGDVVLFNRQPSLHR+SIM H A+++P RT RFN
Sbjct: 428 RSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFN 487
Query: 549 ECVC 560
E VC
Sbjct: 488 ESVC 491
[74][TOP]
>UniRef100_B8C4M1 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana
CCMP1335 RepID=B8C4M1_THAPS
Length = 1422
Score = 229 bits (583), Expect = 1e-58
Identities = 111/189 (58%), Positives = 142/189 (75%), Gaps = 2/189 (1%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+GW+ LQ + A+++N D L KP+RG+ QRLKGK GRFRGNLSGKRVDFS R
Sbjct: 330 MEGWDVLQSQVAQYINGDMPGLKKEMGH-KPIRGLCQRLKGKQGRFRGNLSGKRVDFSAR 388
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLRVDQVG+P+ VA+ +TYPE V+++N ++L V+ GPD +PGAN +
Sbjct: 389 TVISPDPNLRVDQVGVPVHVAKIMTYPETVSRYNIEKLRQRVLNGPDVHPGANLIRPGGE 448
Query: 363 NK--RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536
N + L Y +R++ A+ L +G +VERH+ DGDVVLFNRQPSLH++SIMSH KV+P RT
Sbjct: 449 NSFVKSLAYADRERAAQTLRIGDIVERHMEDGDVVLFNRQPSLHKLSIMSHQVKVMPWRT 508
Query: 537 FRFNECVCA 563
FRFN CVCA
Sbjct: 509 FRFNICVCA 517
[75][TOP]
>UniRef100_A7NZA4 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
RepID=A7NZA4_VITVI
Length = 1370
Score = 229 bits (583), Expect = 1e-58
Identities = 105/184 (57%), Positives = 138/184 (75%)
Frame = +3
Query: 9 GWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTV 188
GW++LQ+E A+++NSD +P A+PL G QRLKGK GRFRGNLSGKRV+++GRTV
Sbjct: 308 GWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTV 367
Query: 189 ISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNK 368
ISPDPNL++ +V IP+ +A+ L+YPERV+ HN ++L ++ GP YPGA + DG+
Sbjct: 368 ISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRYPDGSM 427
Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
R L + RK+ A +L G +VERHL DGDVVLFNRQPSLHR+SIM H A+++P RT RFN
Sbjct: 428 RSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFN 487
Query: 549 ECVC 560
E VC
Sbjct: 488 ESVC 491
[76][TOP]
>UniRef100_UPI00017927B1 PREDICTED: similar to AGAP004703-PA n=1 Tax=Acyrthosiphon pisum
RepID=UPI00017927B1
Length = 1355
Score = 228 bits (582), Expect = 2e-58
Identities = 108/186 (58%), Positives = 140/186 (75%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
+ WE+LQ+ A ++NSD + + K RG QRLKGK GRFRGNLSGKRVDF+ R+
Sbjct: 309 EDWEYLQLHCALYINSDLSGVSRTMMPKKIARGCVQRLKGKHGRFRGNLSGKRVDFTARS 368
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365
VISPDPNLR+++VG+P+R+A+ LTYP++V N + + V+ GP+ +PGANFVE
Sbjct: 369 VISPDPNLRIEEVGVPVRMAKILTYPQKVCPANIELMRKLVMNGPEIHPGANFVELQGSK 428
Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K++LR+GNR +AKDL +G +VERHL DGD+VLFNRQPSLHR+SIM H AKV+ H T R
Sbjct: 429 LKKYLRFGNRPAIAKDLKIGDIVERHLSDGDIVLFNRQPSLHRLSIMCHRAKVLEHNTLR 488
Query: 543 FNECVC 560
FNECVC
Sbjct: 489 FNECVC 494
[77][TOP]
>UniRef100_Q16SE0 DNA-directed RNA polymerase n=1 Tax=Aedes aegypti
RepID=Q16SE0_AEDAE
Length = 1298
Score = 228 bits (582), Expect = 2e-58
Identities = 111/186 (59%), Positives = 137/186 (73%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
+ W++LQ+ A + NS+ + +P KP RGI QRLKGK GRFRGNLSGKRVDFS RT
Sbjct: 310 EDWDYLQLHCALYFNSELSGIPLSLMPKKPTRGIVQRLKGKQGRFRGNLSGKRVDFSART 369
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFV-ETDDG 362
VISPDPNL + QVG+P RVA+ LT+PERV N ++ + G + +PGAN+V +
Sbjct: 370 VISPDPNLMIHQVGVPDRVAKILTFPERVNTANINKMRQLIKNGTEKHPGANYVQQKGSA 429
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K++L YGNR KVA+DL G +VERHL+DGDVVLFNRQPSLH++SIM H AKV P RTFR
Sbjct: 430 FKKYLAYGNRDKVAQDLKCGDIVERHLMDGDVVLFNRQPSLHKLSIMCHVAKVQPQRTFR 489
Query: 543 FNECVC 560
FNEC C
Sbjct: 490 FNECAC 495
[78][TOP]
>UniRef100_Q16PD2 DNA-directed RNA polymerase n=1 Tax=Aedes aegypti
RepID=Q16PD2_AEDAE
Length = 1298
Score = 228 bits (582), Expect = 2e-58
Identities = 111/186 (59%), Positives = 137/186 (73%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
+ W++LQ+ A + NS+ + +P KP RGI QRLKGK GRFRGNLSGKRVDFS RT
Sbjct: 310 EDWDYLQLHCALYFNSELSGIPLSLMPKKPTRGIVQRLKGKQGRFRGNLSGKRVDFSART 369
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFV-ETDDG 362
VISPDPNL + QVG+P RVA+ LT+PERV N ++ + G + +PGAN+V +
Sbjct: 370 VISPDPNLMIHQVGVPDRVAKILTFPERVNTANINKMRQLIKNGTEKHPGANYVQQKGSA 429
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K++L YGNR KVA+DL G +VERHL+DGDVVLFNRQPSLH++SIM H AKV P RTFR
Sbjct: 430 FKKYLAYGNRDKVAQDLKCGDIVERHLMDGDVVLFNRQPSLHKLSIMCHVAKVQPQRTFR 489
Query: 543 FNECVC 560
FNEC C
Sbjct: 490 FNECAC 495
[79][TOP]
>UniRef100_B4MAW8 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
RepID=B4MAW8_DROVI
Length = 1044
Score = 228 bits (582), Expect = 2e-58
Identities = 110/186 (59%), Positives = 141/186 (75%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
+ W++LQ+ A + +S+ + +P + K RGI QRLKGK GRFRGNLSGKRVDFSGRT
Sbjct: 307 EDWDFLQLHVALYFHSEISGIPLNMAPKKTTRGIVQRLKGKQGRFRGNLSGKRVDFSGRT 366
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365
VISPDPNL ++QVG+P+RVA+ LTYPERV N +++ V GP +PGAN+V+ +
Sbjct: 367 VISPDPNLMINQVGVPVRVAKILTYPERVNPANIRQMKQLVRNGPSMHPGANYVQQRGSS 426
Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K++L YGNR+KVA++L G +VERHL D D+VLFNRQPSLH++SIM H AKV P RTFR
Sbjct: 427 FKKYLAYGNREKVAQELKCGDIVERHLRDDDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 486
Query: 543 FNECVC 560
FNEC C
Sbjct: 487 FNECAC 492
[80][TOP]
>UniRef100_Q01DV6 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri
RepID=Q01DV6_OSTTA
Length = 1406
Score = 228 bits (581), Expect = 2e-58
Identities = 108/187 (57%), Positives = 140/187 (74%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLP-PLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSG 179
M+ W++LQ++ A ++NS+ L KPLRG QRLKGK GRFRGNLSGKRVDFS
Sbjct: 321 MENWDFLQIQCAMYINSELPGLSLQYQGPGKPLRGFVQRLKGKQGRFRGNLSGKRVDFSA 380
Query: 180 RTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDD 359
RTVISPDPNL +D+VGIP+ +A+T+TYPE V +HN L V G +PGANFV+
Sbjct: 381 RTVISPDPNLGIDEVGIPIYIAKTMTYPEVVNRHNIAMLRERVRNGMAEHPGANFVKFAS 440
Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
G ++L+YG+R+K+A +L G +VERHL DGD++LFNRQPSLH++SIM+H A+V+P RT
Sbjct: 441 GGMQYLKYGDRRKIASELRFGDIVERHLHDGDILLFNRQPSLHKMSIMAHKARVMPCRTL 500
Query: 540 RFNECVC 560
R NECVC
Sbjct: 501 RLNECVC 507
[81][TOP]
>UniRef100_C5YBD9 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5YBD9_SORBI
Length = 1391
Score = 228 bits (581), Expect = 2e-58
Identities = 110/185 (59%), Positives = 140/185 (75%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
D W++LQ++ ++NSDA LP RG+ QRLKGKTGRFRGNLSGKR +++GRT
Sbjct: 302 DCWQYLQLQVVEYVNSDAPCLPDSQH-----RGLVQRLKGKTGRFRGNLSGKRTEYTGRT 356
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365
VISPDPNL++ +V IP+ +AR LTYPERV+ +N ++L + GP YPGANFV DG
Sbjct: 357 VISPDPNLKITEVAIPVLMARVLTYPERVSNYNIEKLRQCIRNGPFKYPGANFVTQPDGM 416
Query: 366 KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545
K+ L+YG+R+ A+DL G +VERHL DGDVVLFNRQPSLHR+SIMSH A+++P RT RF
Sbjct: 417 KQSLKYGDRRITARDLKCGCIVERHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLRF 476
Query: 546 NECVC 560
NE VC
Sbjct: 477 NESVC 481
[82][TOP]
>UniRef100_B4PX62 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4PX62_DROYA
Length = 1383
Score = 228 bits (581), Expect = 2e-58
Identities = 110/186 (59%), Positives = 140/186 (75%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
+ W++LQ+ A + +S+ + +P + K RGI QRLKGK GRFR NLSGKRVDFSGRT
Sbjct: 307 EDWDFLQLHVALYFHSEISGIPINMAPKKTTRGIVQRLKGKQGRFRCNLSGKRVDFSGRT 366
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365
VISPDPNL ++QVG+P+RVA+ LTYPERV N + + V GP +PGAN+V+ +
Sbjct: 367 VISPDPNLMINQVGVPVRVAKILTYPERVNPANMRHMRELVRNGPSMHPGANYVQQRGSS 426
Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K++L YGNR+KVA++L G +VERHL DGD+VLFNRQPSLH++SIM H AKV P RTFR
Sbjct: 427 FKKYLAYGNREKVAQELKCGDIVERHLRDGDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 486
Query: 543 FNECVC 560
FNEC C
Sbjct: 487 FNECAC 492
[83][TOP]
>UniRef100_B3NXK5 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3NXK5_DROER
Length = 1383
Score = 228 bits (581), Expect = 2e-58
Identities = 110/186 (59%), Positives = 140/186 (75%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
+ W++LQ+ A + +S+ + +P + K RGI QRLKGK GRFR NLSGKRVDFSGRT
Sbjct: 307 EDWDFLQLHVALYFHSEISGIPINMAPKKTTRGIVQRLKGKQGRFRCNLSGKRVDFSGRT 366
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365
VISPDPNL ++QVG+P+RVA+ LTYPERV N + + V GP +PGAN+V+ +
Sbjct: 367 VISPDPNLMINQVGVPVRVAKILTYPERVNPANMRHMRELVRNGPSMHPGANYVQQRGSS 426
Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K++L YGNR+KVA++L G +VERHL DGD+VLFNRQPSLH++SIM H AKV P RTFR
Sbjct: 427 FKKYLAYGNREKVAQELKCGDIVERHLRDGDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 486
Query: 543 FNECVC 560
FNEC C
Sbjct: 487 FNECAC 492
[84][TOP]
>UniRef100_B3MLS5 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3MLS5_DROAN
Length = 1301
Score = 228 bits (581), Expect = 2e-58
Identities = 110/186 (59%), Positives = 141/186 (75%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
+ W++LQ+ A + +S+ + +P + K RGI QRLKGK GRFR NLSGKRVDFSGRT
Sbjct: 307 EDWDFLQLHVALYFHSEISGIPINMAPKKTTRGIVQRLKGKQGRFRCNLSGKRVDFSGRT 366
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365
VISPDPNL ++QVG+P+RVA+ LTYPERV + N + + V GP T+PGAN+V+ +
Sbjct: 367 VISPDPNLMINQVGVPVRVAKILTYPERVNQANMRHMRQLVRNGPSTHPGANYVQQRGSS 426
Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K++L YGNR+KVA++L G +VERHL D D+VLFNRQPSLH++SIM H AKV P RTFR
Sbjct: 427 FKKYLAYGNREKVAQELRCGDIVERHLRDDDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 486
Query: 543 FNECVC 560
FNEC C
Sbjct: 487 FNECAC 492
[85][TOP]
>UniRef100_B4L5G1 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4L5G1_DROMO
Length = 1382
Score = 228 bits (580), Expect = 3e-58
Identities = 110/186 (59%), Positives = 141/186 (75%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
+ W++LQ+ A + +S+ + +P + K RGI QRLKGK GRFRGNLSGKRVDFSGRT
Sbjct: 307 EDWDFLQLHVALYFHSEISGIPLNMAPKKTTRGIVQRLKGKQGRFRGNLSGKRVDFSGRT 366
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365
VISPDPNL ++QVG+P+RVA+ LTYPERV N +++ V GP +PGAN+V+ +
Sbjct: 367 VISPDPNLMINQVGVPVRVAKILTYPERVNPANIRQMKQLVRNGPAMHPGANYVQQRGSS 426
Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K++L YGNR+KVA++L G +VERHL D D+VLFNRQPSLH++SIM H AKV P RTFR
Sbjct: 427 FKKYLAYGNREKVAQELKCGDIVERHLRDDDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 486
Query: 543 FNECVC 560
FNEC C
Sbjct: 487 FNECAC 492
[86][TOP]
>UniRef100_A9UN86 DNA-directed RNA polymerase (Fragment) n=1 Tax=Drosophila
melanogaster RepID=A9UN86_DROME
Length = 1410
Score = 228 bits (580), Expect = 3e-58
Identities = 111/186 (59%), Positives = 140/186 (75%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
+ W++LQ+ A + +S+ + +P + K RGI QRLKGK GRFR NLSGKRVDFSGRT
Sbjct: 334 EDWDFLQLHVALYFHSEISGIPINMAPKKTTRGIVQRLKGKQGRFRCNLSGKRVDFSGRT 393
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365
VISPDPNL ++QVG+P+RVA+ LTYPERV N + + V GP +PGAN+V+ +
Sbjct: 394 VISPDPNLMINQVGVPVRVAKILTYPERVNPANIRHMRELVRNGPSMHPGANYVQQRGSS 453
Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K++L YGNR+KVA++L G VVERHL DGD+VLFNRQPSLH++SIM H AKV P RTFR
Sbjct: 454 FKKYLAYGNREKVAQELKCGDVVERHLRDGDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 513
Query: 543 FNECVC 560
FNEC C
Sbjct: 514 FNECAC 519
[87][TOP]
>UniRef100_A8JUY3 DNA-directed RNA polymerase n=1 Tax=Drosophila melanogaster
RepID=A8JUY3_DROME
Length = 1376
Score = 228 bits (580), Expect = 3e-58
Identities = 111/186 (59%), Positives = 140/186 (75%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
+ W++LQ+ A + +S+ + +P + K RGI QRLKGK GRFR NLSGKRVDFSGRT
Sbjct: 307 EDWDFLQLHVALYFHSEISGIPINMAPKKTTRGIVQRLKGKQGRFRCNLSGKRVDFSGRT 366
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365
VISPDPNL ++QVG+P+RVA+ LTYPERV N + + V GP +PGAN+V+ +
Sbjct: 367 VISPDPNLMINQVGVPVRVAKILTYPERVNPANIRHMRELVRNGPSMHPGANYVQQRGSS 426
Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K++L YGNR+KVA++L G VVERHL DGD+VLFNRQPSLH++SIM H AKV P RTFR
Sbjct: 427 FKKYLAYGNREKVAQELKCGDVVERHLRDGDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 486
Query: 543 FNECVC 560
FNEC C
Sbjct: 487 FNECAC 492
[88][TOP]
>UniRef100_B4JN80 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4JN80_DROGR
Length = 1303
Score = 227 bits (579), Expect = 4e-58
Identities = 110/186 (59%), Positives = 140/186 (75%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
+ W++LQ+ A + +S+ + +P + K RGI QRLKGK GRFRGNLSGKRVDFSGRT
Sbjct: 307 EDWDFLQLHVALYFHSEISGIPLNMAPKKTTRGIVQRLKGKQGRFRGNLSGKRVDFSGRT 366
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365
VISPDPNL ++QVG+P+RVA+ LTYPERV N + + V GP +PGAN+V+ +
Sbjct: 367 VISPDPNLMINQVGVPVRVAKILTYPERVNPANIRIMKQLVRNGPSVHPGANYVQQRGSS 426
Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K++L YGNR+KVA++L G +VERHL D D+VLFNRQPSLH++SIM H AKV P RTFR
Sbjct: 427 FKKYLAYGNREKVAQELKCGDIVERHLRDDDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 486
Query: 543 FNECVC 560
FNEC C
Sbjct: 487 FNECAC 492
[89][TOP]
>UniRef100_B4HCC5 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis
RepID=B4HCC5_DROPE
Length = 968
Score = 227 bits (578), Expect = 5e-58
Identities = 110/186 (59%), Positives = 140/186 (75%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
+ W++LQ+ A + +S+ + +P + K RGI QRLKGK GRFR NLSGKRVDFSGRT
Sbjct: 307 EDWDFLQLHVALYFHSEISGIPINMAPKKTTRGIVQRLKGKQGRFRCNLSGKRVDFSGRT 366
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365
VISPDPNL ++QVG+P+RVA+ LTYPERV N + + V GP T+PGAN+V+ +
Sbjct: 367 VISPDPNLMINQVGVPVRVAKILTYPERVNLANIRHMKHLVRNGPGTHPGANYVQQRGSS 426
Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K++L YGNR+KVA++L G +VERHL D D+VLFNRQPSLH++SIM H AKV P RTFR
Sbjct: 427 FKKYLAYGNREKVAQELKCGDIVERHLCDNDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 486
Query: 543 FNECVC 560
FNEC C
Sbjct: 487 FNECAC 492
[90][TOP]
>UniRef100_B4H9Z6 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis
RepID=B4H9Z6_DROPE
Length = 424
Score = 227 bits (578), Expect = 5e-58
Identities = 110/186 (59%), Positives = 140/186 (75%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
+ W++LQ+ A + +S+ + +P + K RGI QRLKGK GRFR NLSGKRVDFSGRT
Sbjct: 87 EDWDFLQLHVALYFHSEISGIPINMAPKKTTRGIVQRLKGKQGRFRCNLSGKRVDFSGRT 146
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365
VISPDPNL ++QVG+P+RVA+ LTYPERV N + + V GP T+PGAN+V+ +
Sbjct: 147 VISPDPNLMINQVGVPVRVAKILTYPERVNLANIRHMKHLVRNGPGTHPGANYVQQRGSS 206
Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K++L YGNR+KVA++L G +VERHL D D+VLFNRQPSLH++SIM H AKV P RTFR
Sbjct: 207 FKKYLAYGNREKVAQELKCGDIVERHLCDNDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 266
Query: 543 FNECVC 560
FNEC C
Sbjct: 267 FNECAC 272
[91][TOP]
>UniRef100_B9PZ91 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii GT1
RepID=B9PZ91_TOXGO
Length = 1747
Score = 226 bits (577), Expect = 7e-58
Identities = 115/187 (61%), Positives = 146/187 (78%), Gaps = 3/187 (1%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLAST---AKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
WE+LQ++ R +N+DA + L ++ +KP RGI QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 382 WEFLQLQCTRLINADAPAVSQLLASKNISKPGRGICQRLKGKEGRFRGNLSGKRVDFSGR 441
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPN V +V +P VA+ LT+PERV + N + L AAV++G +PGA +V DG
Sbjct: 442 TVISPDPNANVYEVVVPEWVAKRLTFPERVNRVNIEVLRAAVLKGCSDWPGACYVNKVDG 501
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+K LRY NR++VA++L +G VVERHL +GDVVLFNRQPSLHR+SIM+H A+V+P RTFR
Sbjct: 502 SKCSLRYANRRQVAENLQIGDVVERHLCNGDVVLFNRQPSLHRMSIMAHRARVMPWRTFR 561
Query: 543 FNECVCA 563
FNECVC+
Sbjct: 562 FNECVCS 568
[92][TOP]
>UniRef100_B6KRB8 DNA-directed RNA polymerase n=2 Tax=Toxoplasma gondii
RepID=B6KRB8_TOXGO
Length = 1746
Score = 226 bits (577), Expect = 7e-58
Identities = 115/187 (61%), Positives = 146/187 (78%), Gaps = 3/187 (1%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLAST---AKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
WE+LQ++ R +N+DA + L ++ +KP RGI QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 381 WEFLQLQCTRLINADAPAVSQLLASKNISKPGRGICQRLKGKEGRFRGNLSGKRVDFSGR 440
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPN V +V +P VA+ LT+PERV + N + L AAV++G +PGA +V DG
Sbjct: 441 TVISPDPNANVYEVVVPEWVAKRLTFPERVNRVNIEVLRAAVLKGCSDWPGACYVNKVDG 500
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+K LRY NR++VA++L +G VVERHL +GDVVLFNRQPSLHR+SIM+H A+V+P RTFR
Sbjct: 501 SKCSLRYANRRQVAENLQIGDVVERHLCNGDVVLFNRQPSLHRMSIMAHRARVMPWRTFR 560
Query: 543 FNECVCA 563
FNECVC+
Sbjct: 561 FNECVCS 567
[93][TOP]
>UniRef100_UPI000023CDC4 hypothetical protein FG09860.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023CDC4
Length = 2443
Score = 225 bits (573), Expect = 2e-57
Identities = 114/188 (60%), Positives = 136/188 (72%), Gaps = 2/188 (1%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ WE+LQ + A ++NSD L K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 1312 MEQWEYLQTQIAMYVNSDVPGLQQ-PGFGKTTRGFCQRLKGKQGRFRGNLSGKRVDFSGR 1370
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDD- 359
TVISPDPNL +DQV +P VA+ LTYPERV +HN ++L V GPD +PGA V D
Sbjct: 1371 TVISPDPNLGIDQVAVPELVAKNLTYPERVQRHNIEKLRQCVKNGPDVWPGAQRVIKSDE 1430
Query: 360 -GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536
G + L++GNR+ +A+DL G +VERHL D D+VLFNRQPSLH++SIMSH AKV P RT
Sbjct: 1431 GGYLQSLKFGNREYIARDLKFGDIVERHLEDNDIVLFNRQPSLHKLSIMSHLAKVRPWRT 1490
Query: 537 FRFNECVC 560
FR NECVC
Sbjct: 1491 FRLNECVC 1498
[94][TOP]
>UniRef100_C4JWU1 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704
RepID=C4JWU1_UNCRE
Length = 1435
Score = 225 bits (573), Expect = 2e-57
Identities = 110/184 (59%), Positives = 138/184 (75%), Gaps = 1/184 (0%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
W+++Q++ A ++NSD L A KP+RGI QRLKGK GRFRGNLSGKRVDFSGRTVI
Sbjct: 325 WDYMQLQIAVYINSDVPGLQK-ADFGKPIRGICQRLKGKQGRFRGNLSGKRVDFSGRTVI 383
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN-K 368
SPDPNLR+D+V +P VA +TYPERVT++N+++L + G +PGAN++ K
Sbjct: 384 SPDPNLRIDEVAVPQLVAMNMTYPERVTRYNKEKLRERIRNGTKVWPGANYLSKRGTTFK 443
Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
FL+YGN + +A L G VVERHL DGD+VLFNRQPSLH++SI+SH KV PHRTFR N
Sbjct: 444 VFLKYGNLRLMADQLEEGDVVERHLEDGDIVLFNRQPSLHKLSILSHFVKVRPHRTFRLN 503
Query: 549 ECVC 560
ECVC
Sbjct: 504 ECVC 507
[95][TOP]
>UniRef100_Q29CI9 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura
pseudoobscura RepID=Q29CI9_DROPS
Length = 644
Score = 224 bits (572), Expect = 3e-57
Identities = 109/186 (58%), Positives = 139/186 (74%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
+ W++LQ+ A + +S+ + +P + K RGI QRLKGK GRFR NLSGKRVDFSGRT
Sbjct: 307 EDWDFLQLHVALYFHSEISGIPINMAPKKTTRGIVQRLKGKQGRFRCNLSGKRVDFSGRT 366
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365
VISPDPNL ++QVG+P+RVA+ LTYPERV N + + V GP +PGAN+V+ +
Sbjct: 367 VISPDPNLMINQVGVPVRVAKILTYPERVNLANIRHMKHLVRNGPGKHPGANYVQQRGSS 426
Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K++L YGNR+KVA++L G +VERHL D D+VLFNRQPSLH++SIM H AKV P RTFR
Sbjct: 427 FKKYLAYGNREKVAQELKCGDIVERHLCDNDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 486
Query: 543 FNECVC 560
FNEC C
Sbjct: 487 FNECAC 492
[96][TOP]
>UniRef100_Q0CS43 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
RepID=Q0CS43_ASPTN
Length = 1450
Score = 224 bits (572), Expect = 3e-57
Identities = 110/187 (58%), Positives = 140/187 (74%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 322 MECWDYMQLQIAVYINSDVPGLNK-ADLGKPIRGFVQRLKGKQGRFRGNLSGKRVDFSGR 380
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLRVD+V +P VA+ +TYPE VT++N+++L V G +PGAN++
Sbjct: 381 TVISPDPNLRVDEVAVPELVAKNMTYPEVVTRYNKEKLQQRVRNGTKKWPGANYLMKKGA 440
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
+ K FL+YGN +A + G VVERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRTF
Sbjct: 441 DYKTFLKYGNLNMIADQIQEGDVVERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRTF 500
Query: 540 RFNECVC 560
R NECVC
Sbjct: 501 RLNECVC 507
[97][TOP]
>UniRef100_A2QU24 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2QU24_ASPNC
Length = 1450
Score = 224 bits (572), Expect = 3e-57
Identities = 110/187 (58%), Positives = 140/187 (74%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 322 MECWDYMQLQIAVYINSDVPGLNK-ADLGKPIRGFVQRLKGKQGRFRGNLSGKRVDFSGR 380
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFV-ETDD 359
TVISPDPNLRVD+V +P VA+ +TYPE VT++N+++L V G +PGAN++ +
Sbjct: 381 TVISPDPNLRVDEVAVPELVAKNMTYPEVVTRYNKEKLQQRVRNGTKKWPGANYIMKKGQ 440
Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
K FL+YGN +A L G V+ERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRTF
Sbjct: 441 TFKLFLKYGNLNMIADQLQEGDVIERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRTF 500
Query: 540 RFNECVC 560
R NECVC
Sbjct: 501 RLNECVC 507
[98][TOP]
>UniRef100_Q1DVM7 DNA-directed RNA polymerase n=1 Tax=Coccidioides immitis
RepID=Q1DVM7_COCIM
Length = 1430
Score = 224 bits (571), Expect = 3e-57
Identities = 111/184 (60%), Positives = 137/184 (74%), Gaps = 1/184 (0%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
W+++Q++ A ++NSD L A KP+RGI QRLKGK GRFRGNLSGKRVDFSGRTVI
Sbjct: 325 WDYMQLQIAVYINSDVPGLQK-ADFGKPIRGICQRLKGKQGRFRGNLSGKRVDFSGRTVI 383
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN-K 368
SPDPNLR+D+V +P VA +TYPERVT++N+++L V G +PGAN++ K
Sbjct: 384 SPDPNLRIDEVAVPQLVAMNMTYPERVTRYNKEKLRERVRNGTKIWPGANYLSKRGTTFK 443
Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
FL+YGN +A L G VVERHL DGD+VLFNRQPSLH++SI+SH KV PHRTFR N
Sbjct: 444 VFLKYGNLNLMADQLEEGDVVERHLEDGDIVLFNRQPSLHKLSILSHFVKVRPHRTFRLN 503
Query: 549 ECVC 560
ECVC
Sbjct: 504 ECVC 507
[99][TOP]
>UniRef100_C5PCH6 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735
delta SOWgp RepID=C5PCH6_COCP7
Length = 1444
Score = 224 bits (571), Expect = 3e-57
Identities = 111/184 (60%), Positives = 137/184 (74%), Gaps = 1/184 (0%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
W+++Q++ A ++NSD L A KP+RGI QRLKGK GRFRGNLSGKRVDFSGRTVI
Sbjct: 325 WDYMQLQIAVYINSDVPGLQK-ADFGKPIRGICQRLKGKQGRFRGNLSGKRVDFSGRTVI 383
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN-K 368
SPDPNLR+D+V +P VA +TYPERVT++N+++L V G +PGAN++ K
Sbjct: 384 SPDPNLRIDEVAVPQLVAMNMTYPERVTRYNKEKLRERVRNGTKIWPGANYLSKRGTTFK 443
Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
FL+YGN +A L G VVERHL DGD+VLFNRQPSLH++SI+SH KV PHRTFR N
Sbjct: 444 VFLKYGNLNLMADQLEEGDVVERHLEDGDIVLFNRQPSLHKLSILSHFVKVRPHRTFRLN 503
Query: 549 ECVC 560
ECVC
Sbjct: 504 ECVC 507
[100][TOP]
>UniRef100_C5FEK3 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
RepID=C5FEK3_NANOT
Length = 1443
Score = 224 bits (571), Expect = 3e-57
Identities = 109/186 (58%), Positives = 142/186 (76%), Gaps = 3/186 (1%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLAST--AKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
W+++Q++ A ++NSD +P L +T K +RG+ QRLKGK GRFRGNLSGKRVDFSGRT
Sbjct: 324 WDYMQLQIAVYINSD---IPGLQNTDSKKSIRGLCQRLKGKQGRFRGNLSGKRVDFSGRT 380
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-VETDDG 362
VISPDPNLR+D+V +P VA +TYPERVT++N+++L V G T+PGAN+ ++ +
Sbjct: 381 VISPDPNLRIDEVAVPQLVAMNMTYPERVTRYNKEKLRQCVRNGTKTWPGANYLIKQGNS 440
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+ FL+YGN +A L G +VERHL DGD+VLFNRQPSLH++SI+SH KV PHRTFR
Sbjct: 441 FRLFLKYGNLNMIANQLSEGDIVERHLEDGDIVLFNRQPSLHKLSILSHFVKVRPHRTFR 500
Query: 543 FNECVC 560
NECVC
Sbjct: 501 LNECVC 506
[101][TOP]
>UniRef100_B6H2R1 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum
Wisconsin 54-1255 RepID=B6H2R1_PENCW
Length = 1448
Score = 224 bits (571), Expect = 3e-57
Identities = 108/187 (57%), Positives = 142/187 (75%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 322 MECWDYMQLQIAVYINSDVPGLNK-ADLGKPIRGFVQRLKGKQGRFRGNLSGKRVDFSGR 380
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGAN-FVETDD 359
TVISPDPNLRVD+V +P VA+ +TYPE VT++N+++L + G + +PGAN V+
Sbjct: 381 TVISPDPNLRVDEVAVPELVAKNMTYPELVTRYNKEKLQQRICNGSNKWPGANLIVKKGT 440
Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
G ++ L+Y N +++A L G +VERHL DGD+VLFNRQPSLH++SI+SH AK+ PHRTF
Sbjct: 441 GFRQMLKYSNTQRMADQLQEGDLVERHLEDGDIVLFNRQPSLHKLSILSHFAKIRPHRTF 500
Query: 540 RFNECVC 560
R NECVC
Sbjct: 501 RLNECVC 507
[102][TOP]
>UniRef100_B6AIF4 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
RepID=B6AIF4_9CRYT
Length = 1803
Score = 224 bits (570), Expect = 5e-57
Identities = 111/190 (58%), Positives = 142/190 (74%), Gaps = 3/190 (1%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTA---KPLRGISQRLKGKTGRFRGNLSGKRVDF 173
+ WE+LQ++ R +N++A + L ++ K RGI QRLKGK GRFRGNLSGKRVDF
Sbjct: 301 LGNWEFLQLQCTRLINAEAPGVNQLLASKNIPKAGRGICQRLKGKEGRFRGNLSGKRVDF 360
Query: 174 SGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVET 353
SGRTVISPDPN+ VD+V +P+ +AR +TYPERV HN +RL AV+ G + +PGA +V
Sbjct: 361 SGRTVISPDPNVAVDEVVVPVVIARIMTYPERVNSHNIERLRDAVLNGHNIWPGACYVYK 420
Query: 354 DDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHR 533
+G+K LRY NR+ V++ L +G VVERH++ GD VLFNRQPSLHR+SIMSH V+P R
Sbjct: 421 TNGSKSSLRYANRRIVSERLEIGDVVERHMITGDSVLFNRQPSLHRLSIMSHRVVVMPWR 480
Query: 534 TFRFNECVCA 563
TFRFNEC CA
Sbjct: 481 TFRFNECACA 490
[103][TOP]
>UniRef100_Q2U3T5 DNA-directed RNA polymerase n=1 Tax=Aspergillus oryzae
RepID=Q2U3T5_ASPOR
Length = 1447
Score = 224 bits (570), Expect = 5e-57
Identities = 111/187 (59%), Positives = 140/187 (74%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 322 MECWDYMQLQIAVYINSDVPGLNK-ADLGKPIRGFVQRLKGKQGRFRGNLSGKRVDFSGR 380
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-VETDD 359
TVISPDPNLRVD+V +P VA+ +TYPE VT++N+++L V G +PGAN+ V+
Sbjct: 381 TVISPDPNLRVDEVAVPELVAKNMTYPEVVTRYNKEKLQQRVRNGTKKWPGANYLVKKGS 440
Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
K FL+YG+ +A L G VVERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRTF
Sbjct: 441 TFKTFLKYGSLNMIADQLQEGDVVERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRTF 500
Query: 540 RFNECVC 560
R NECVC
Sbjct: 501 RLNECVC 507
[104][TOP]
>UniRef100_C5JRK1 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis
SLH14081 RepID=C5JRK1_AJEDS
Length = 1456
Score = 224 bits (570), Expect = 5e-57
Identities = 109/184 (59%), Positives = 138/184 (75%), Gaps = 1/184 (0%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFS RTVI
Sbjct: 325 WDYMQLQLAVYINSDVPGLQK-ADFGKPIRGFCQRLKGKQGRFRGNLSGKRVDFSARTVI 383
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN-K 368
SPDPNLRVD+V +P +A +TYPE+VT++N+++L + G T+PGAN+V N K
Sbjct: 384 SPDPNLRVDEVAVPQLIAMNMTYPEQVTRYNKEKLRQRIRNGTKTWPGANYVFKKSQNFK 443
Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
L++GN VA DL G +VERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRTFR N
Sbjct: 444 MNLKFGNPNLVANDLEEGDIVERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRTFRLN 503
Query: 549 ECVC 560
ECVC
Sbjct: 504 ECVC 507
[105][TOP]
>UniRef100_C5GRI8 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis ER-3
RepID=C5GRI8_AJEDR
Length = 1456
Score = 224 bits (570), Expect = 5e-57
Identities = 109/184 (59%), Positives = 138/184 (75%), Gaps = 1/184 (0%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFS RTVI
Sbjct: 325 WDYMQLQLAVYINSDVPGLQK-ADFGKPIRGFCQRLKGKQGRFRGNLSGKRVDFSARTVI 383
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN-K 368
SPDPNLRVD+V +P +A +TYPE+VT++N+++L + G T+PGAN+V N K
Sbjct: 384 SPDPNLRVDEVAVPQLIAMNMTYPEQVTRYNKEKLRQRIRNGTKTWPGANYVFKKSQNFK 443
Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
L++GN VA DL G +VERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRTFR N
Sbjct: 444 MNLKFGNPNLVANDLEEGDIVERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRTFRLN 503
Query: 549 ECVC 560
ECVC
Sbjct: 504 ECVC 507
[106][TOP]
>UniRef100_B8NTG3 DNA-directed RNA polymerase n=1 Tax=Aspergillus flavus NRRL3357
RepID=B8NTG3_ASPFN
Length = 1436
Score = 224 bits (570), Expect = 5e-57
Identities = 111/187 (59%), Positives = 140/187 (74%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 322 MECWDYMQLQIAVYINSDVPGLNK-ADLGKPIRGFVQRLKGKQGRFRGNLSGKRVDFSGR 380
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-VETDD 359
TVISPDPNLRVD+V +P VA+ +TYPE VT++N+++L V G +PGAN+ V+
Sbjct: 381 TVISPDPNLRVDEVAVPELVAKNMTYPEVVTRYNKEKLQQRVRNGTKKWPGANYLVKKGS 440
Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
K FL+YG+ +A L G VVERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRTF
Sbjct: 441 TFKTFLKYGSLNMIADQLQEGDVVERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRTF 500
Query: 540 RFNECVC 560
R NECVC
Sbjct: 501 RLNECVC 507
[107][TOP]
>UniRef100_A1CLD8 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
RepID=A1CLD8_ASPCL
Length = 1449
Score = 223 bits (569), Expect = 6e-57
Identities = 109/187 (58%), Positives = 140/187 (74%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 322 MECWDYMQLQIAVYINSDVPGLNK-ADLGKPIRGFVQRLKGKQGRFRGNLSGKRVDFSGR 380
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-VETDD 359
TVISPDPNLRVD+V +P VA+ +TYPE V+++N+++L V G +PGAN+ ++
Sbjct: 381 TVISPDPNLRVDEVAVPELVAKNMTYPEVVSRYNKEKLQQRVRNGTKKWPGANYIIKKGS 440
Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
K FL+YGN +A L G V+ERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRTF
Sbjct: 441 DFKLFLKYGNLNMIADQLQEGDVIERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRTF 500
Query: 540 RFNECVC 560
R NECVC
Sbjct: 501 RLNECVC 507
[108][TOP]
>UniRef100_B9FFW1 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9FFW1_ORYSJ
Length = 1321
Score = 223 bits (568), Expect = 8e-57
Identities = 108/185 (58%), Positives = 138/185 (74%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
D W+ LQ++ ++NSDA +LP RG+ QRLKGKTGRFRGNLSGKR +++GRT
Sbjct: 303 DCWQHLQLQVVEYINSDAPSLPESQH-----RGLVQRLKGKTGRFRGNLSGKRTEYTGRT 357
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365
VISPDPNLR+ +V IP+ +AR LTYPERV+ +N ++L + GP +PGANF+ DG
Sbjct: 358 VISPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANFIIQPDGT 417
Query: 366 KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545
K L+Y +R+ A+DL G VVERHL DGD+VLFNRQPSLHR+SIMSH A+++P RT RF
Sbjct: 418 KLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRF 477
Query: 546 NECVC 560
NE VC
Sbjct: 478 NESVC 482
[109][TOP]
>UniRef100_Q7X881 DNA-directed RNA polymerase n=3 Tax=Oryza sativa RepID=Q7X881_ORYSJ
Length = 1383
Score = 223 bits (568), Expect = 8e-57
Identities = 108/185 (58%), Positives = 138/185 (74%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
D W+ LQ++ ++NSDA +LP RG+ QRLKGKTGRFRGNLSGKR +++GRT
Sbjct: 302 DCWQHLQLQVVEYINSDAPSLPESQH-----RGLVQRLKGKTGRFRGNLSGKRTEYTGRT 356
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365
VISPDPNLR+ +V IP+ +AR LTYPERV+ +N ++L + GP +PGANF+ DG
Sbjct: 357 VISPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANFIIQPDGT 416
Query: 366 KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545
K L+Y +R+ A+DL G VVERHL DGD+VLFNRQPSLHR+SIMSH A+++P RT RF
Sbjct: 417 KLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRF 476
Query: 546 NECVC 560
NE VC
Sbjct: 477 NESVC 481
[110][TOP]
>UniRef100_C8VPJ2 Putative uncharacterized protein n=2 Tax=Emericella nidulans
RepID=C8VPJ2_EMENI
Length = 1445
Score = 223 bits (568), Expect = 8e-57
Identities = 111/188 (59%), Positives = 140/188 (74%), Gaps = 2/188 (1%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 322 MECWDYMQLQIAVYINSDVPGLNK-ADLGKPIRGFVQRLKGKQGRFRGNLSGKRVDFSGR 380
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLRVD+V +P VA+ +TYPE V ++N+++L V G +PGAN++ G
Sbjct: 381 TVISPDPNLRVDEVAVPELVAKNMTYPEVVNRYNKEKLQQCVRNGQKKWPGANYI-IKKG 439
Query: 363 N--KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536
N K L+YGN K +A L G +VERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRT
Sbjct: 440 NPLKTMLKYGNLKFIADQLQEGDIVERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRT 499
Query: 537 FRFNECVC 560
FR NECVC
Sbjct: 500 FRLNECVC 507
[111][TOP]
>UniRef100_C6HPI8 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus H143
RepID=C6HPI8_AJECH
Length = 1333
Score = 223 bits (568), Expect = 8e-57
Identities = 109/184 (59%), Positives = 139/184 (75%), Gaps = 1/184 (0%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFSGRTVI
Sbjct: 292 WDYMQLQLAVYINSDVPGLQK-ADFGKPIRGFCQRLKGKQGRFRGNLSGKRVDFSGRTVI 350
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN-K 368
SPDPNLRV++V +P VA +TYPE+VT++N+++L + G T+PGAN+V N K
Sbjct: 351 SPDPNLRVNEVAVPQLVAMNMTYPEQVTRYNKEKLRQRIRNGTKTWPGANYVLKKSQNFK 410
Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
L++GN VA +L G +VERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRTFR N
Sbjct: 411 MNLKFGNPNLVANELEEGDIVERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRTFRLN 470
Query: 549 ECVC 560
ECVC
Sbjct: 471 ECVC 474
[112][TOP]
>UniRef100_C0NZL8 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
RepID=C0NZL8_AJECG
Length = 1456
Score = 223 bits (568), Expect = 8e-57
Identities = 109/184 (59%), Positives = 139/184 (75%), Gaps = 1/184 (0%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFSGRTVI
Sbjct: 325 WDYMQLQLAVYINSDVPGLQK-ADFGKPIRGFCQRLKGKQGRFRGNLSGKRVDFSGRTVI 383
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN-K 368
SPDPNLRV++V +P VA +TYPE+VT++N+++L + G T+PGAN+V N K
Sbjct: 384 SPDPNLRVNEVAVPQLVAMNMTYPEQVTRYNKEKLRQRIRNGTKTWPGANYVLKKSQNFK 443
Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
L++GN VA +L G +VERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRTFR N
Sbjct: 444 MNLKFGNPNLVANELEEGDIVERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRTFRLN 503
Query: 549 ECVC 560
ECVC
Sbjct: 504 ECVC 507
[113][TOP]
>UniRef100_A6RGX8 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
RepID=A6RGX8_AJECN
Length = 1439
Score = 223 bits (568), Expect = 8e-57
Identities = 109/184 (59%), Positives = 139/184 (75%), Gaps = 1/184 (0%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFSGRTVI
Sbjct: 325 WDYMQLQLAVYINSDVPGLQK-ADFGKPIRGFCQRLKGKQGRFRGNLSGKRVDFSGRTVI 383
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN-K 368
SPDPNLRV++V +P VA +TYPE+VT++N+++L + G T+PGAN+V N K
Sbjct: 384 SPDPNLRVNEVAVPQLVAMNMTYPEQVTRYNKEKLRQRIRNGTKTWPGANYVLKKSQNFK 443
Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
L++GN VA +L G +VERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRTFR N
Sbjct: 444 MNLKFGNPNLVANELEEGDIVERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRTFRLN 503
Query: 549 ECVC 560
ECVC
Sbjct: 504 ECVC 507
[114][TOP]
>UniRef100_C9SQ00 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Verticillium
albo-atrum VaMs.102 RepID=C9SQ00_9PEZI
Length = 1456
Score = 223 bits (567), Expect = 1e-56
Identities = 114/188 (60%), Positives = 137/188 (72%), Gaps = 2/188 (1%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ WE+LQ++ A ++NSD L K +RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 317 MEQWEYLQLQIAMYVNSDVPGLQQ-PGFGKTVRGFCQRLKGKQGRFRGNLSGKRVDFSGR 375
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDD- 359
TVISPDPNL + QV IP+ VA+ LTYPERV ++ K+L V GPD +PGA V D
Sbjct: 376 TVISPDPNLGITQVAIPILVAKNLTYPERVNDYSLKKLRKCVQNGPDVWPGAQQVIKSDE 435
Query: 360 -GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536
G K L++GNR +VA+DL +G VVERH+ D D+VLFNRQPSLH++SIMSH KV P RT
Sbjct: 436 GGYKISLKFGNRGQVARDLKVGDVVERHIEDNDIVLFNRQPSLHKLSIMSHLVKVRPWRT 495
Query: 537 FRFNECVC 560
FR NECVC
Sbjct: 496 FRLNECVC 503
[115][TOP]
>UniRef100_B0XZZ0 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus
RepID=B0XZZ0_ASPFC
Length = 1453
Score = 223 bits (567), Expect = 1e-56
Identities = 108/184 (58%), Positives = 138/184 (75%), Gaps = 1/184 (0%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFSGRTVI
Sbjct: 325 WDYMQLQIAVYINSDVPGLNK-ADLGKPIRGFVQRLKGKQGRFRGNLSGKRVDFSGRTVI 383
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-VETDDGNK 368
SPDPNLRVD+V +P VA+ +TYPE VT++N+++L V G +PGAN+ ++ K
Sbjct: 384 SPDPNLRVDEVAVPELVAKNMTYPEVVTRYNKEKLQQRVRNGTKKWPGANYIIKKGSDFK 443
Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
FL+YGN +A + G V+ERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRTFR N
Sbjct: 444 LFLKYGNLNMIADQIQEGDVIERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRTFRLN 503
Query: 549 ECVC 560
ECVC
Sbjct: 504 ECVC 507
[116][TOP]
>UniRef100_A1D5Y9 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1D5Y9_NEOFI
Length = 1453
Score = 223 bits (567), Expect = 1e-56
Identities = 108/184 (58%), Positives = 138/184 (75%), Gaps = 1/184 (0%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
W+++Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFSGRTVI
Sbjct: 325 WDYMQLQIAVYINSDVPGLNK-ADLGKPIRGFVQRLKGKQGRFRGNLSGKRVDFSGRTVI 383
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-VETDDGNK 368
SPDPNLRVD+V +P VA+ +TYPE VT++N+++L V G +PGAN+ ++ K
Sbjct: 384 SPDPNLRVDEVAVPELVAKNMTYPEVVTRYNKEKLQQRVRNGTKKWPGANYIIKKGSDFK 443
Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
FL+YGN +A + G V+ERH+ DGD+VLFNRQPSLH++SI+SH AKV PHRTFR N
Sbjct: 444 LFLKYGNLNMIADQIQEGDVIERHIEDGDIVLFNRQPSLHKLSILSHFAKVRPHRTFRLN 503
Query: 549 ECVC 560
ECVC
Sbjct: 504 ECVC 507
[117][TOP]
>UniRef100_Q4P157 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis
RepID=Q4P157_USTMA
Length = 1400
Score = 221 bits (564), Expect = 2e-56
Identities = 111/185 (60%), Positives = 141/185 (76%), Gaps = 2/185 (1%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
WE+LQ+ A ++NS+ +P KP RG QRLKGK GRFRGNLSGKRVDFSGRTVI
Sbjct: 309 WEFLQLTVALYINSELPGVPTQPGQ-KPSRGFCQRLKGKQGRFRGNLSGKRVDFSGRTVI 367
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF-VETDDGNK 368
PDPNL++D+V +P RVA+ LTYPERV +HN ++L AV G D +PGAN+ ++ G K
Sbjct: 368 GPDPNLKIDEVAVPQRVAKILTYPERVFQHNIEQLRQAVRNGTDIHPGANYLMDGKTGFK 427
Query: 369 RFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545
RFL++ G R+++A+ L +G VVERH+ DGD+VLFNRQPSLH++SIMSH AK+ P RTFR
Sbjct: 428 RFLKFPGMREELAEKLRVGDVVERHIRDGDIVLFNRQPSLHKLSIMSHRAKIRPWRTFRL 487
Query: 546 NECVC 560
NEC C
Sbjct: 488 NECAC 492
[118][TOP]
>UniRef100_Q5CWY0 DNA-directed RNA polymerase n=2 Tax=Cryptosporidium parvum
RepID=Q5CWY0_CRYPV
Length = 1871
Score = 221 bits (563), Expect = 3e-56
Identities = 109/190 (57%), Positives = 139/190 (73%), Gaps = 3/190 (1%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTA---KPLRGISQRLKGKTGRFRGNLSGKRVDF 173
+ WE+LQ++ R +N+DA + L ++ K RG+ QRLKGK GRFRGNLSGKRVDF
Sbjct: 300 LGNWEFLQLQCTRLINADAPGVNQLLASKNIPKAGRGVCQRLKGKEGRFRGNLSGKRVDF 359
Query: 174 SGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVET 353
SGRTVISPDPN+ VD+V +P+ +A+ LTYPERV N L AV+ G D +PGA +V
Sbjct: 360 SGRTVISPDPNIEVDEVVVPMIIAKKLTYPERVNAINIDSLREAVLNGHDIWPGACYVYK 419
Query: 354 DDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHR 533
+G+K LRY NR+ V++ L +G +VERH+ GD+VLFNRQPSLHR+SIMSH V+P R
Sbjct: 420 SNGSKSSLRYANRRVVSERLEIGDIVERHMKTGDIVLFNRQPSLHRLSIMSHKVVVMPWR 479
Query: 534 TFRFNECVCA 563
TFRFNEC CA
Sbjct: 480 TFRFNECACA 489
[119][TOP]
>UniRef100_Q5CK97 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium hominis
RepID=Q5CK97_CRYHO
Length = 1869
Score = 221 bits (563), Expect = 3e-56
Identities = 109/190 (57%), Positives = 139/190 (73%), Gaps = 3/190 (1%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTA---KPLRGISQRLKGKTGRFRGNLSGKRVDF 173
+ WE+LQ++ R +N+DA + L ++ K RG+ QRLKGK GRFRGNLSGKRVDF
Sbjct: 300 LGNWEFLQLQCTRLINADAPGVNQLLASKNIPKAGRGVCQRLKGKEGRFRGNLSGKRVDF 359
Query: 174 SGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVET 353
SGRTVISPDPN+ VD+V +P+ +A+ LTYPERV N L AV+ G D +PGA +V
Sbjct: 360 SGRTVISPDPNIEVDEVVVPMIIAKKLTYPERVNAINIDSLREAVLNGHDIWPGACYVYK 419
Query: 354 DDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHR 533
+G+K LRY NR+ V++ L +G +VERH+ GD+VLFNRQPSLHR+SIMSH V+P R
Sbjct: 420 SNGSKSSLRYANRRVVSERLEIGDIVERHMKTGDIVLFNRQPSLHRLSIMSHKVVVMPWR 479
Query: 534 TFRFNECVCA 563
TFRFNEC CA
Sbjct: 480 TFRFNECACA 489
[120][TOP]
>UniRef100_C1GGI7 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb18 RepID=C1GGI7_PARBD
Length = 1458
Score = 221 bits (563), Expect = 3e-56
Identities = 107/184 (58%), Positives = 137/184 (74%), Gaps = 1/184 (0%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
W+ +Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFS RTVI
Sbjct: 325 WDHMQLQLAVYINSDVPGLQK-ADFGKPIRGFCQRLKGKQGRFRGNLSGKRVDFSSRTVI 383
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN-K 368
SPDPNLR+D+V +P+ VA +TYPE+VT++N+++L V G T+PGAN+V N K
Sbjct: 384 SPDPNLRIDEVAVPILVAMNMTYPEQVTRYNKEKLRQCVRNGTKTWPGANYVLKKSQNFK 443
Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
L++GN +A +L G +VERH+ DGD+VLFNRQPSLH++SI+SH KV PHRTFR N
Sbjct: 444 MNLKFGNPNLIANELEEGDIVERHIEDGDIVLFNRQPSLHKLSILSHFVKVRPHRTFRLN 503
Query: 549 ECVC 560
ECVC
Sbjct: 504 ECVC 507
[121][TOP]
>UniRef100_C0SHD3 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb03 RepID=C0SHD3_PARBP
Length = 1449
Score = 221 bits (563), Expect = 3e-56
Identities = 107/184 (58%), Positives = 137/184 (74%), Gaps = 1/184 (0%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
W+ +Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFS RTVI
Sbjct: 316 WDHMQLQLAVYINSDVPGLQK-ADFGKPIRGFCQRLKGKQGRFRGNLSGKRVDFSSRTVI 374
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN-K 368
SPDPNLR+D+V +P+ VA +TYPE+VT++N+++L V G T+PGAN+V N K
Sbjct: 375 SPDPNLRIDEVAVPILVAMNMTYPEQVTRYNKEKLRQCVRNGTKTWPGANYVLKKSQNFK 434
Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
L++GN +A +L G +VERH+ DGD+VLFNRQPSLH++SI+SH KV PHRTFR N
Sbjct: 435 MNLKFGNPNLIANELEEGDIVERHIEDGDIVLFNRQPSLHKLSILSHFVKVRPHRTFRLN 494
Query: 549 ECVC 560
ECVC
Sbjct: 495 ECVC 498
[122][TOP]
>UniRef100_A7EYX3 DNA-directed RNA polymerase n=1 Tax=Sclerotinia sclerotiorum 1980
UF-70 RepID=A7EYX3_SCLS1
Length = 1459
Score = 221 bits (562), Expect = 4e-56
Identities = 110/187 (58%), Positives = 137/187 (73%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NSD L K +RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 318 MEQWDFLQLQIAMYVNSDVPGLQQ-PGFGKAIRGFCQRLKGKQGRFRGNLSGKRVDFSGR 376
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGA-NFVETDD 359
TVISPDPNL +D+V +P+ VA+ LTYPERV + N ++L VI GP+ +PGA V+ D
Sbjct: 377 TVISPDPNLGIDEVAVPILVAKNLTYPERVQRQNIEKLRKCVINGPNVHPGAQQIVKKDS 436
Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
+K L++ R AK L +G VVERHL DGD+VLFNRQPSLH++SIMSH AK+ P RTF
Sbjct: 437 NHKISLKFAKRDNEAKFLKIGDVVERHLEDGDIVLFNRQPSLHKLSIMSHYAKIRPWRTF 496
Query: 540 RFNECVC 560
R NECVC
Sbjct: 497 RLNECVC 503
[123][TOP]
>UniRef100_C1GX38 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb01 RepID=C1GX38_PARBA
Length = 1425
Score = 220 bits (561), Expect = 5e-56
Identities = 107/184 (58%), Positives = 136/184 (73%), Gaps = 1/184 (0%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
W+ +Q++ A ++NSD L A KP+RG QRLKGK GRFRGNLSGKRVDFS RTVI
Sbjct: 293 WDHMQLQLAVYINSDVPGLQK-ADFGKPIRGFCQRLKGKQGRFRGNLSGKRVDFSSRTVI 351
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN-K 368
SPDPNLR+D+V +P+ VA +TYPE+VT++N+ +L V G T+PGAN+V N K
Sbjct: 352 SPDPNLRIDEVAVPILVAMNMTYPEQVTRYNKDKLRQCVRNGTKTWPGANYVLKKSQNFK 411
Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
L++GN +A +L G +VERH+ DGD+VLFNRQPSLH++SI+SH KV PHRTFR N
Sbjct: 412 MNLKFGNPNLIANELEEGDIVERHIEDGDIVLFNRQPSLHKLSILSHFVKVRPHRTFRLN 471
Query: 549 ECVC 560
ECVC
Sbjct: 472 ECVC 475
[124][TOP]
>UniRef100_A6SCV1 DNA-directed RNA polymerase n=1 Tax=Botryotinia fuckeliana B05.10
RepID=A6SCV1_BOTFB
Length = 1468
Score = 220 bits (561), Expect = 5e-56
Identities = 109/187 (58%), Positives = 137/187 (73%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NSD L K +RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 315 MEQWDFLQLQIAMYVNSDVPGLQQ-PGFGKAIRGFCQRLKGKQGRFRGNLSGKRVDFSGR 373
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGA-NFVETDD 359
TVISPDPNL +D+V +P+ VA+ LTYPERV + N ++L VI GP+ +PGA ++ D
Sbjct: 374 TVISPDPNLGIDEVAVPILVAKNLTYPERVQRQNIEKLRQCVINGPNVHPGAQQIIKKDS 433
Query: 360 GNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
+K L++ R AK L +G VVERHL DGD+VLFNRQPSLH++SIMSH AK+ P RTF
Sbjct: 434 NHKISLKFAKRDNEAKFLKIGDVVERHLEDGDIVLFNRQPSLHKLSIMSHYAKIRPWRTF 493
Query: 540 RFNECVC 560
R NECVC
Sbjct: 494 RLNECVC 500
[125][TOP]
>UniRef100_B9T0Q9 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9T0Q9_RICCO
Length = 1383
Score = 219 bits (558), Expect = 1e-55
Identities = 107/186 (57%), Positives = 134/186 (72%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
+D W+ LQ A +MNSD +P KPL G QRLKGK GRFRGNLSGKRV+F+GR
Sbjct: 280 LDSWDGLQAAVALYMNSDV-RVPNNVEVGKPLSGFVQRLKGKQGRFRGNLSGKRVEFTGR 338
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNL++ +V IP+ +AR L+YPERV+ HN ++L V GP YPGA+ V DG
Sbjct: 339 TVISPDPNLKITEVAIPIHMARILSYPERVSHHNIEKLRQLVSNGPQKYPGASTVRYPDG 398
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+ + L RK +A++L G +V+RHL DGDVVLFNRQPSLHR+SIM H A+++P RT R
Sbjct: 399 SSKRLIGSYRKTIAEELTFGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLR 458
Query: 543 FNECVC 560
FNE VC
Sbjct: 459 FNESVC 464
[126][TOP]
>UniRef100_A9RSV5 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9RSV5_PHYPA
Length = 1397
Score = 219 bits (557), Expect = 1e-55
Identities = 106/188 (56%), Positives = 143/188 (76%), Gaps = 2/188 (1%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLP--PLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFS 176
M+ WE LQ + ++ +NS+ T +P ++ K RG QRLKGK GRFRGNLSGKRVDF+
Sbjct: 314 METWELLQSQVSQLINSE-TPVPRSEQPTSGKQPRGFVQRLKGKQGRFRGNLSGKRVDFT 372
Query: 177 GRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETD 356
GRTVISPDPNL++ +V +PL +A+ LTYPE+V+++N +L +I G +PGANF+
Sbjct: 373 GRTVISPDPNLKITEVAVPLLMAQLLTYPEKVSRYNIDKLRGRIINGMTKHPGANFIIFP 432
Query: 357 DGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536
DGNK +L++G+R++ A +L G +VERHL DGD+VLFNRQPSLHR+SIMSH A+++P RT
Sbjct: 433 DGNKLYLKFGDRRRYAAELKYGDIVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 492
Query: 537 FRFNECVC 560
RFNE VC
Sbjct: 493 LRFNESVC 500
[127][TOP]
>UniRef100_B0EG66 DNA-directed RNA polymerase n=1 Tax=Entamoeba dispar SAW760
RepID=B0EG66_ENTDI
Length = 1379
Score = 219 bits (557), Expect = 1e-55
Identities = 113/188 (60%), Positives = 134/188 (71%), Gaps = 3/188 (1%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
D W+ L + + F+NSD LP KPLR I QRLKGK GRFRGNL GKRVDFSGRT
Sbjct: 325 DSWDQLTIAVSMFINSD---LPGCDDKGKPLRSICQRLKGKHGRFRGNLLGKRVDFSGRT 381
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGAN-FVETDDG 362
VISPDPNL ++Q+G+P +A LTYPERVTKHN +L VI G + YPG N + DG
Sbjct: 382 VISPDPNLDIEQIGVPKLMAIKLTYPERVTKHNIDKLRQLVINGSNIYPGCNSIIGGTDG 441
Query: 363 NKR--FLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536
+R ++ R+K AKDL +G +VERHL D D+VLFNRQPSLHRISIM H AK++P RT
Sbjct: 442 LRRSMCIKLEMREKFAKDLKIGDIVERHLEDNDIVLFNRQPSLHRISIMCHKAKILPWRT 501
Query: 537 FRFNECVC 560
RFNECVC
Sbjct: 502 LRFNECVC 509
[128][TOP]
>UniRef100_Q976A5 DNA-directed RNA polymerase n=1 Tax=Sulfolobus tokodaii
RepID=Q976A5_SULTO
Length = 884
Score = 218 bits (556), Expect = 2e-55
Identities = 107/187 (57%), Positives = 139/187 (74%), Gaps = 2/187 (1%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W+ LQ + + +++ +PP + +PLR ++QRLKGK GRFRGNLSGKRVDFS R
Sbjct: 268 DLWDLLQYHVSTYFDNEIPGIPPAKHRSGRPLRTLAQRLKGKEGRFRGNLSGKRVDFSAR 327
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPN+ +D+VG+P+ +A+TLT PERVTK N +R+ VI GP+ +PGAN+V DG
Sbjct: 328 TVISPDPNISIDEVGVPVAIAKTLTVPERVTKMNIERMRQYVINGPEKWPGANYVIRPDG 387
Query: 363 NKRFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
+ LRY +RK++A L G +VERHL+DGD+VLFNRQPSLHRIS+M H KV+P RTF
Sbjct: 388 RRIDLRYVKDRKELASSLTPGYIVERHLIDGDIVLFNRQPSLHRISMMGHKVKVLPGRTF 447
Query: 540 RFNECVC 560
R N VC
Sbjct: 448 RLNLLVC 454
[129][TOP]
>UniRef100_C4M626 DNA-directed RNA polymerase n=1 Tax=Entamoeba histolytica HM-1:IMSS
RepID=C4M626_ENTHI
Length = 1379
Score = 218 bits (555), Expect = 3e-55
Identities = 113/188 (60%), Positives = 134/188 (71%), Gaps = 3/188 (1%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
D W+ L V + F+NS+ LP KPLR I QRLKGK GRFRGNL GKRVDFSGRT
Sbjct: 325 DSWDQLTVAVSMFINSE---LPGCDDKGKPLRAICQRLKGKHGRFRGNLLGKRVDFSGRT 381
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGAN-FVETDDG 362
VISPDPNL ++Q+G+P +A LTYPERVTKHN +L VI G + YPG N + DG
Sbjct: 382 VISPDPNLDIEQIGVPKLMAVKLTYPERVTKHNIDKLRQLVINGSNNYPGCNSIIGGSDG 441
Query: 363 NKR--FLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536
+R ++ R+K AKDL +G +VERHL D D+VLFNRQPSLHRISIM H AK++P RT
Sbjct: 442 LRRSMCIKLEMREKFAKDLKIGDIVERHLEDNDIVLFNRQPSLHRISIMCHRAKILPWRT 501
Query: 537 FRFNECVC 560
RFNECVC
Sbjct: 502 LRFNECVC 509
[130][TOP]
>UniRef100_C7YT68 Putative uncharacterized protein n=1 Tax=Nectria haematococca mpVI
77-13-4 RepID=C7YT68_NECH7
Length = 1449
Score = 218 bits (554), Expect = 3e-55
Identities = 112/188 (59%), Positives = 133/188 (70%), Gaps = 2/188 (1%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ WE+LQ + A ++NSD L K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 319 MEQWEYLQTQIAMYVNSDVPGLQQ-PGFGKATRGFCQRLKGKQGRFRGNLSGKRVDFSGR 377
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGA-NFVETDD 359
TVISPDPNL +DQV +P VA+ LTYPERV +HN ++L + G D +PGA V+ DD
Sbjct: 378 TVISPDPNLGIDQVAVPELVAKNLTYPERVQRHNIEKLRQCIKNGVDVWPGAQRVVKQDD 437
Query: 360 GNKRF-LRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536
G L++ NR ++DL G VVERHL D D+VLFNRQPSLH++SIMSH AKV P RT
Sbjct: 438 GGYSINLKFANRDNTSRDLKYGDVVERHLEDNDIVLFNRQPSLHKLSIMSHLAKVRPWRT 497
Query: 537 FRFNECVC 560
FR NECVC
Sbjct: 498 FRLNECVC 505
[131][TOP]
>UniRef100_Q8SRM3 DNA-directed RNA polymerase n=1 Tax=Encephalitozoon cuniculi
RepID=Q8SRM3_ENCCU
Length = 1349
Score = 216 bits (551), Expect = 7e-55
Identities = 111/185 (60%), Positives = 139/185 (75%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
+ W+ LQ++ A +NS+ LP + +P+RGI QRLKGK GRFR NLSGKRVDFSGRT
Sbjct: 320 EDWDHLQLQCALLINSE---LPQIGIPGQPVRGIVQRLKGKNGRFRCNLSGKRVDFSGRT 376
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365
VISPDPNL +++VGIP R+A+ LT ERVT+ NR++L A V+ GP+ YPGAN+V +
Sbjct: 377 VISPDPNLSIEEVGIPERMAKILTISERVTRLNRRKLQALVLNGPENYPGANYV-VGEKF 435
Query: 366 KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545
KRFL YG R +L G VVERHL+DGD+VLFNRQPSLHR+SIMSH +V ++T RF
Sbjct: 436 KRFLMYGKRD---IELKYGEVVERHLMDGDMVLFNRQPSLHRMSIMSHKVRVHRNKTLRF 492
Query: 546 NECVC 560
NECVC
Sbjct: 493 NECVC 497
[132][TOP]
>UniRef100_Q2GTS6 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
RepID=Q2GTS6_CHAGB
Length = 1290
Score = 216 bits (551), Expect = 7e-55
Identities = 113/189 (59%), Positives = 135/189 (71%), Gaps = 3/189 (1%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ WE+LQ++ ++NSD L KP+RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 190 MEQWEFLQLQVGMYVNSDVPGLYQ-PGFGKPIRGFCQRLKGKQGRFRGNLSGKRVDFSGR 248
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNL ++QV +P VA+ LTYPERV N ++L VI GP+ +PGA + DG
Sbjct: 249 TVISPDPNLSIEQVAVPELVAKNLTYPERVNHANIEKLRERVITGPNIWPGAQGIIKKDG 308
Query: 363 NKRFLRYGN---RKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHR 533
K L+ GN R+K A +L G VVERHL D DVVLFNRQPSLH++SIMSH AK+ P R
Sbjct: 309 AKYNLKIGNESLREKHANNLEHGDVVERHLEDNDVVLFNRQPSLHKLSIMSHLAKIRPWR 368
Query: 534 TFRFNECVC 560
TFR NECVC
Sbjct: 369 TFRLNECVC 377
[133][TOP]
>UniRef100_P11512 DNA-directed RNA polymerase subunit A' n=1 Tax=Sulfolobus
acidocaldarius RepID=RPOA1_SULAC
Length = 880
Score = 216 bits (550), Expect = 1e-54
Identities = 110/187 (58%), Positives = 136/187 (72%), Gaps = 2/187 (1%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W+ LQ A + +++ LPP + +PLR ++QRLKGK GRFRGNLSGKRVDFS R
Sbjct: 264 DLWDLLQYHVATYFDNEIPGLPPAKHRSGRPLRTLAQRLKGKEGRFRGNLSGKRVDFSAR 323
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNL +D+VGIP +AR LT PERVT N +R+ +I GPD +PGAN+V DG
Sbjct: 324 TVISPDPNLSIDEVGIPYTIARMLTVPERVTNINIERIRQYIINGPDKWPGANYVIKPDG 383
Query: 363 NKRFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
+ LRY +RK++A + G VVERHLVDGDVVLFNRQPSLHRIS+M+H +V+P RTF
Sbjct: 384 RRIDLRYVKDRKELASSITAGYVVERHLVDGDVVLFNRQPSLHRISMMAHKVRVLPGRTF 443
Query: 540 RFNECVC 560
R N C
Sbjct: 444 RLNLLDC 450
[134][TOP]
>UniRef100_C5KZ53 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
RepID=C5KZ53_9ALVE
Length = 1719
Score = 215 bits (548), Expect = 2e-54
Identities = 111/187 (59%), Positives = 133/187 (71%), Gaps = 3/187 (1%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
W+WL + A MNS+AT L A T KP+R I RLKGK GRFRGNLSGKRV+FSGRTVI
Sbjct: 280 WQWLSAQVALMMNSEATGLAAAAPTTKPIRSICSRLKGKEGRFRGNLSGKRVNFSGRTVI 339
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG--- 362
SPDPNL V +V IP A LT+PE V + N L VIRG + +PGA+ + G
Sbjct: 340 SPDPNLEVTEVIIPQYSAMKLTFPEVVCRTNIDMLRDRVIRGTEGHPGAHIIRLKSGGVK 399
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
N F++ R+++A DL G VVERHL DGDVVLFNRQPSLH++SIM+H AKV+P RTFR
Sbjct: 400 NLAFIKKQIREELAADLQYGDVVERHLQDGDVVLFNRQPSLHKMSIMAHRAKVMPWRTFR 459
Query: 543 FNECVCA 563
FNECVC+
Sbjct: 460 FNECVCS 466
[135][TOP]
>UniRef100_C5KF34 DNA-directed RNA polymerase (Fragment) n=1 Tax=Perkinsus marinus
ATCC 50983 RepID=C5KF34_9ALVE
Length = 465
Score = 215 bits (548), Expect = 2e-54
Identities = 111/187 (59%), Positives = 133/187 (71%), Gaps = 3/187 (1%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
W+WL + A MNS+AT L A T KP+R I RLKGK GRFRGNLSGKRV+FSGRTVI
Sbjct: 189 WQWLSAQVALMMNSEATGLAAAAPTTKPIRSICSRLKGKEGRFRGNLSGKRVNFSGRTVI 248
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG--- 362
SPDPNL V +V IP A LT+PE V + N L VIRG + +PGA+ + G
Sbjct: 249 SPDPNLEVTEVIIPQYSAMKLTFPEVVCRTNIDMLRDRVIRGTEGHPGAHIIRLKSGGVK 308
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
N F++ R+++A DL G VVERHL DGDVVLFNRQPSLH++SIM+H AKV+P RTFR
Sbjct: 309 NLAFIKKQIREELAADLQYGDVVERHLQDGDVVLFNRQPSLHKMSIMAHRAKVMPWRTFR 368
Query: 543 FNECVCA 563
FNECVC+
Sbjct: 369 FNECVCS 375
[136][TOP]
>UniRef100_Q4U940 DNA-directed RNA polymerase n=1 Tax=Theileria annulata
RepID=Q4U940_THEAN
Length = 1648
Score = 214 bits (544), Expect = 5e-54
Identities = 106/186 (56%), Positives = 139/186 (74%), Gaps = 3/186 (1%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLAST---AKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
W+ +Q + RF+NSD+ L L + +KP RGI QRLKGK GRFRGNLSGKRVDFS R
Sbjct: 365 WQIIQYQCTRFINSDSPALAQLLLSRRVSKPGRGIFQRLKGKEGRFRGNLSGKRVDFSAR 424
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPN+ +D+V +P +AR LT+PERVTK+N L A++ G +PGA++V DG
Sbjct: 425 TVISPDPNVGIDEVVVPEWIARRLTFPERVTKYNIHVLKKAILNGVSVWPGASYVNKLDG 484
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+K LR+ N K ++++L +G +VERHL +GD+V+FNRQPSLHR+SIM H A+V+ TFR
Sbjct: 485 SKCSLRFANPKHMSENLQVGDIVERHLWNGDIVIFNRQPSLHRLSIMCHRARVMSGSTFR 544
Query: 543 FNECVC 560
FNECVC
Sbjct: 545 FNECVC 550
[137][TOP]
>UniRef100_Q4N1T2 DNA-directed RNA polymerase n=1 Tax=Theileria parva
RepID=Q4N1T2_THEPA
Length = 1617
Score = 213 bits (543), Expect = 6e-54
Identities = 106/186 (56%), Positives = 139/186 (74%), Gaps = 3/186 (1%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLAST---AKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
W+ +Q + RF+NSD+ L L + +KP RGI QRLKGK GRFRGNLSGKRVDFS R
Sbjct: 357 WQIIQYQCTRFINSDSPALAQLLLSRRVSKPGRGIFQRLKGKEGRFRGNLSGKRVDFSAR 416
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPN+ +D+V +P +AR LT+PERVTK+N L A++ G +PGA++V DG
Sbjct: 417 TVISPDPNVGIDEVVVPEWIARRLTFPERVTKYNIDVLKKAILNGVSVWPGASYVNKLDG 476
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+K LR+ N K ++++L +G +VERHL +GD+V+FNRQPSLHR+SIM H A+V+ TFR
Sbjct: 477 SKCSLRFANPKHMSENLQVGDIVERHLWNGDIVIFNRQPSLHRLSIMCHRARVMNGSTFR 536
Query: 543 FNECVC 560
FNECVC
Sbjct: 537 FNECVC 542
[138][TOP]
>UniRef100_Q8U0M4 DNA-directed RNA polymerase n=1 Tax=Pyrococcus furiosus
RepID=Q8U0M4_PYRFU
Length = 907
Score = 212 bits (539), Expect = 2e-53
Identities = 100/186 (53%), Positives = 137/186 (73%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLA-STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W+ LQ ++N++A +PP + +PL+ ++QRLKGK GRFRGNLSGKRV+FS R
Sbjct: 267 DLWDLLQYHVTTYINNEAPGVPPAKHKSGRPLKTLAQRLKGKEGRFRGNLSGKRVNFSAR 326
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDP + +++VG+P+ VA LT PE+VT+ N +RL V+ GPD YPGAN+V +G
Sbjct: 327 TVISPDPMISINEVGVPVEVAMELTVPEKVTEFNIERLRKMVLNGPDKYPGANYVIDPEG 386
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+R + N++ +A L +G VERHL+DGD+VLFNRQPSLHR+SIM+H +V+P+RTFR
Sbjct: 387 RRRRIMDSNKETLANQLDIGWTVERHLMDGDIVLFNRQPSLHRMSIMAHRVRVMPYRTFR 446
Query: 543 FNECVC 560
N VC
Sbjct: 447 LNLAVC 452
[139][TOP]
>UniRef100_UPI000069FEE9 DNA-directed RNA polymerase III largest subunit (EC 2.7.7.6)
(RPC155) (RPC1). n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI000069FEE9
Length = 477
Score = 211 bits (536), Expect = 4e-53
Identities = 98/170 (57%), Positives = 133/170 (78%), Gaps = 1/170 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 306 MEDWDFLQLQCALYINSELSGIPMNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 365
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LT+PE+V + N + + V GPD +PGANF++
Sbjct: 366 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNQANMQLMRKLVQNGPDVHPGANFIQQRHT 425
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSH 509
KRFL+YGNR+K+A++L G +VERHL+DGD+VLFNRQPSLH++SIM+H
Sbjct: 426 QMKRFLKYGNREKIAQELRFGDIVERHLIDGDIVLFNRQPSLHKLSIMAH 475
[140][TOP]
>UniRef100_A9VCM2 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis
RepID=A9VCM2_MONBE
Length = 1414
Score = 211 bits (536), Expect = 4e-53
Identities = 107/187 (57%), Positives = 126/187 (67%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M WE LQV A + N D LP K RG QRLKGK GRFRGNLSGKRV++SGR
Sbjct: 292 MQTWEALQVHVALYFNGDLPGLPKDLKPKKAPRGFYQRLKGKQGRFRGNLSGKRVNYSGR 351
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPN +D+V +P V + LTYPE V +N +RL AAV GPD YPGA +E
Sbjct: 352 TVISPDPNASIDEVCVPYHVCKILTYPEMVNDYNIQRLRAAVENGPDNYPGAVLLEKSRD 411
Query: 363 NKRF-LRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
+ + L + NR+K A++L G +V RHL+DGD LFNRQPSLHR+SIM H K P RTF
Sbjct: 412 KRTYDLAHCNRQKSARELAKGDIVRRHLIDGDYALFNRQPSLHRMSIMCHRVKARPWRTF 471
Query: 540 RFNECVC 560
RFNECVC
Sbjct: 472 RFNECVC 478
[141][TOP]
>UniRef100_B4IKC6 DNA-directed RNA polymerase n=1 Tax=Drosophila sechellia
RepID=B4IKC6_DROSE
Length = 1369
Score = 210 bits (535), Expect = 5e-53
Identities = 107/186 (57%), Positives = 132/186 (70%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
+ W++LQ+ A + + RGI QRLKGK GRFR NLSGKRVDFSGRT
Sbjct: 307 EDWDFLQLHVALYSTTT--------------RGIVQRLKGKQGRFRCNLSGKRVDFSGRT 352
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365
VISPDPNL ++QVG+P+RVA+ LTYPERV N + + V GP +PGAN+V+ +
Sbjct: 353 VISPDPNLMINQVGVPVRVAKILTYPERVNPANIRHMRELVRNGPSMHPGANYVQQRGSS 412
Query: 366 -KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K++L YGNR+KVA++L G VVERHL D D+VLFNRQPSLH++SIM H AKV P RTFR
Sbjct: 413 FKKYLAYGNREKVAQELKCGDVVERHLRDEDIVLFNRQPSLHKMSIMCHRAKVQPQRTFR 472
Query: 543 FNECVC 560
FNEC C
Sbjct: 473 FNECAC 478
[142][TOP]
>UniRef100_C4V991 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01
RepID=C4V991_NOSCE
Length = 1335
Score = 210 bits (535), Expect = 5e-53
Identities = 111/186 (59%), Positives = 137/186 (73%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
D WE LQ++ A +NSD LP + ++P++GI QRLKGK+GRFR NLSGKRVDFSGRT
Sbjct: 311 DDWESLQLQCALMVNSD---LPQINVQSQPIKGIVQRLKGKSGRFRCNLSGKRVDFSGRT 367
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365
VISP+PNL +DQV +P +A+ LT PE+VTK N+ RL V GP +YPGAN+V
Sbjct: 368 VISPNPNLSIDQVDVPEFMAKILTIPEKVTKFNKSRLQNLVKNGPKSYPGANYV-IGSKY 426
Query: 366 KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545
K+FL YG R ++L G VVERHLV+GDVVLFNRQPSLHR+SIMSH + ++T RF
Sbjct: 427 KKFLLYGGRD---EELNEGDVVERHLVNGDVVLFNRQPSLHRMSIMSHFVNIHKNKTLRF 483
Query: 546 NECVCA 563
NECVCA
Sbjct: 484 NECVCA 489
[143][TOP]
>UniRef100_Q7ZXW5 DNA-directed RNA polymerase n=1 Tax=Xenopus laevis
RepID=Q7ZXW5_XENLA
Length = 489
Score = 209 bits (533), Expect = 9e-53
Identities = 98/173 (56%), Positives = 134/173 (77%), Gaps = 1/173 (0%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NS+ + +P + K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 306 MEDWDFLQLQCALYINSELSGIPMNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGR 365
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNLR+D+V +P+ VA+ LT+PE+V + N + + V GP+ +PGANF++
Sbjct: 366 TVISPDPNLRIDEVAVPVHVAKILTFPEKVNQANMQLMRKLVQNGPEIHPGANFIQQRHT 425
Query: 363 N-KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAK 518
KRFL+YGNR+K+A++L G +VERHL+DGD+VLFNRQPSLH++SIM+H K
Sbjct: 426 QMKRFLKYGNREKIAQELRFGDIVERHLIDGDIVLFNRQPSLHKLSIMAHILK 478
[144][TOP]
>UniRef100_B2VYJ3 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2VYJ3_PYRTR
Length = 1471
Score = 209 bits (533), Expect = 9e-53
Identities = 108/197 (54%), Positives = 139/197 (70%), Gaps = 11/197 (5%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NSDA L K +RG SQRLKGK GRFR NLSGKRVDFSGR
Sbjct: 322 MEQWDFLQLQIAMYINSDAPGLKQ-QGLQKTMRGFSQRLKGKGGRFRQNLSGKRVDFSGR 380
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVI PDPNL +D+V +P R+A+ LTYPE+VT++N ++L V G YPGAN++ T G
Sbjct: 381 TVIGPDPNLSIDEVAVPQRIAKNLTYPEKVTRYNIEKLRRLVRNGAQKYPGANYILTGQG 440
Query: 363 -NKRFLRYG----NRKK------VAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSH 509
NK ++ +R K AK L +G +VERH+ DGD+VLFNRQPSLH++SI+SH
Sbjct: 441 PNKDPIKISLIALSRNKGERLDFTAKRLKIGDIVERHIEDGDIVLFNRQPSLHKLSILSH 500
Query: 510 SAKVVPHRTFRFNECVC 560
AK+ P RTFR NECVC
Sbjct: 501 RAKIRPWRTFRLNECVC 517
[145][TOP]
>UniRef100_C4KIV8 DNA-directed RNA polymerase n=1 Tax=Sulfolobus islandicus M.16.4
RepID=C4KIV8_SULIK
Length = 880
Score = 209 bits (533), Expect = 9e-53
Identities = 108/187 (57%), Positives = 135/187 (72%), Gaps = 2/187 (1%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W+ LQ A + +++ LPP + +PLR ++QRLKGK GRFRGNLSGKRVDFS R
Sbjct: 264 DLWDLLQYHVATYFDNEIPGLPPSKHRSGRPLRTLAQRLKGKEGRFRGNLSGKRVDFSSR 323
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPN+ +D+VG+P +ARTLT PER+T N ++L VI GPD +PGAN+V DG
Sbjct: 324 TVISPDPNISIDEVGVPEIIARTLTVPERITPWNIEKLRQFVINGPDKWPGANYVIRPDG 383
Query: 363 NKRFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
+ LRY +RK++A L G VVERHL DGDVVLFNRQPSLHRIS+M+H +V+ TF
Sbjct: 384 RRIDLRYVKDRKELASTLAPGYVVERHLTDGDVVLFNRQPSLHRISMMAHRVRVLKGLTF 443
Query: 540 RFNECVC 560
R N VC
Sbjct: 444 RLNLLVC 450
[146][TOP]
>UniRef100_C3MY99 DNA-directed RNA polymerase n=2 Tax=Sulfolobus islandicus
RepID=C3MY99_SULIM
Length = 880
Score = 209 bits (533), Expect = 9e-53
Identities = 108/187 (57%), Positives = 135/187 (72%), Gaps = 2/187 (1%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W+ LQ A + +++ LPP + +PLR ++QRLKGK GRFRGNLSGKRVDFS R
Sbjct: 264 DLWDLLQYHVATYFDNEIPGLPPSKHRSGRPLRTLAQRLKGKEGRFRGNLSGKRVDFSSR 323
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPN+ +D+VG+P +ARTLT PER+T N ++L VI GPD +PGAN+V DG
Sbjct: 324 TVISPDPNISIDEVGVPEIIARTLTVPERITPWNIEKLRQFVINGPDKWPGANYVIRPDG 383
Query: 363 NKRFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
+ LRY +RK++A L G VVERHL DGDVVLFNRQPSLHRIS+M+H +V+ TF
Sbjct: 384 RRIDLRYVKDRKELASTLAPGYVVERHLTDGDVVLFNRQPSLHRISMMAHRVRVLKGLTF 443
Query: 540 RFNECVC 560
R N VC
Sbjct: 444 RLNLLVC 450
[147][TOP]
>UniRef100_C3MRK3 DNA-directed RNA polymerase n=3 Tax=Sulfolobus islandicus
RepID=C3MRK3_SULIL
Length = 880
Score = 209 bits (533), Expect = 9e-53
Identities = 108/187 (57%), Positives = 135/187 (72%), Gaps = 2/187 (1%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W+ LQ A + +++ LPP + +PLR ++QRLKGK GRFRGNLSGKRVDFS R
Sbjct: 264 DLWDLLQYHVATYFDNEIPGLPPSKHRSGRPLRTLAQRLKGKEGRFRGNLSGKRVDFSSR 323
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPN+ +D+VG+P +ARTLT PER+T N ++L VI GPD +PGAN+V DG
Sbjct: 324 TVISPDPNISIDEVGVPEIIARTLTVPERITPWNIEKLRQFVINGPDKWPGANYVIRPDG 383
Query: 363 NKRFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
+ LRY +RK++A L G VVERHL DGDVVLFNRQPSLHRIS+M+H +V+ TF
Sbjct: 384 RRIDLRYVKDRKELASTLAPGYVVERHLTDGDVVLFNRQPSLHRISMMAHRVRVLKGLTF 443
Query: 540 RFNECVC 560
R N VC
Sbjct: 444 RLNLLVC 450
[148][TOP]
>UniRef100_A4YCQ9 DNA-directed RNA polymerase n=1 Tax=Metallosphaera sedula DSM 5348
RepID=A4YCQ9_METS5
Length = 886
Score = 209 bits (533), Expect = 9e-53
Identities = 106/187 (56%), Positives = 135/187 (72%), Gaps = 2/187 (1%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W+ LQ A + +++ LP + +PLR ++QRLKGK GRFRGNLSGKRVDFS R
Sbjct: 270 DLWDLLQYHVATYFDNEIPGLPTSKHRSGRPLRTLAQRLKGKEGRFRGNLSGKRVDFSAR 329
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPN+ +D+VG+P VA+ LT PE+VTK N +R+ VI GPD +PGAN+V DG
Sbjct: 330 TVISPDPNISIDEVGVPYDVAQILTVPEKVTKWNIERMRQYVINGPDKWPGANYVVRPDG 389
Query: 363 NKRFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
+ LRY +RK++A L +VERHLVDGD+V+FNRQPSLHRIS+M H +V+P RTF
Sbjct: 390 RRIDLRYVKDRKELAATLAPNFIVERHLVDGDIVIFNRQPSLHRISMMGHKVRVLPGRTF 449
Query: 540 RFNECVC 560
R N VC
Sbjct: 450 RLNLLVC 456
[149][TOP]
>UniRef100_B8YB53 DNA-directed RNA polymerase n=1 Tax=Sulfolobus shibatae B12
RepID=B8YB53_SULSH
Length = 880
Score = 209 bits (533), Expect = 9e-53
Identities = 108/187 (57%), Positives = 135/187 (72%), Gaps = 2/187 (1%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W+ LQ A + +++ LPP + +PLR ++QRLKGK GRFRGNLSGKRVDFS R
Sbjct: 264 DLWDLLQYHVATYFDNEIPGLPPSKHRSGRPLRTLAQRLKGKEGRFRGNLSGKRVDFSSR 323
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPN+ +D+VG+P +ARTLT PER+T N ++L VI GPD +PGAN+V DG
Sbjct: 324 TVISPDPNISIDEVGVPEIIARTLTVPERITPWNIEKLRQFVINGPDKWPGANYVIRPDG 383
Query: 363 NKRFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
+ LRY +RK++A L G VVERHL DGDVVLFNRQPSLHRIS+M+H +V+ TF
Sbjct: 384 RRIDLRYVKDRKELASTLAPGYVVERHLTDGDVVLFNRQPSLHRISMMAHRVRVLKGLTF 443
Query: 540 RFNECVC 560
R N VC
Sbjct: 444 RLNLLVC 450
[150][TOP]
>UniRef100_UPI0001505876 NRPC1; DNA binding / DNA-directed RNA polymerase/ ribonucleoside
binding / zinc ion binding n=1 Tax=Arabidopsis thaliana
RepID=UPI0001505876
Length = 1376
Score = 209 bits (532), Expect = 1e-52
Identities = 103/186 (55%), Positives = 135/186 (72%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M W+ +Q+E AR++NS+ PL GI QRLKGK GRFR NLSGKRV+F+GR
Sbjct: 309 MQVWDTVQIEVARYINSEVRGCQNQPEE-HPLSGILQRLKGKGGRFRANLSGKRVEFTGR 367
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNL++ +VGIP+ +A+ LT+PE V++HN ++L V GP+ YPGA V DG
Sbjct: 368 TVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVRNGPNKYPGARNVRYPDG 427
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+ R L RK++A +L +G +V+RHL +GDVVLFNRQPSLHR+SIM H A+++P RT R
Sbjct: 428 SSRTLVGDYRKRIADELAIGCIVDRHLQEGDVVLFNRQPSLHRMSIMCHRARIMPWRTLR 487
Query: 543 FNECVC 560
FNE VC
Sbjct: 488 FNESVC 493
[151][TOP]
>UniRef100_Q9LVH0 DNA-directed RNA polymerase n=1 Tax=Arabidopsis thaliana
RepID=Q9LVH0_ARATH
Length = 1383
Score = 209 bits (532), Expect = 1e-52
Identities = 103/186 (55%), Positives = 135/186 (72%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M W+ +Q+E AR++NS+ PL GI QRLKGK GRFR NLSGKRV+F+GR
Sbjct: 309 MQVWDTVQIEVARYINSEVRGCQNQPEE-HPLSGILQRLKGKGGRFRANLSGKRVEFTGR 367
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNL++ +VGIP+ +A+ LT+PE V++HN ++L V GP+ YPGA V DG
Sbjct: 368 TVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVRNGPNKYPGARNVRYPDG 427
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+ R L RK++A +L +G +V+RHL +GDVVLFNRQPSLHR+SIM H A+++P RT R
Sbjct: 428 SSRTLVGDYRKRIADELAIGCIVDRHLQEGDVVLFNRQPSLHRMSIMCHRARIMPWRTLR 487
Query: 543 FNECVC 560
FNE VC
Sbjct: 488 FNESVC 493
[152][TOP]
>UniRef100_Q0V3B7 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum
RepID=Q0V3B7_PHANO
Length = 1473
Score = 209 bits (531), Expect = 2e-52
Identities = 110/199 (55%), Positives = 138/199 (69%), Gaps = 13/199 (6%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W++LQ++ A ++NSDA L K +RG SQRLKGK GRFR NLSGKRVDFSGR
Sbjct: 322 MEQWDFLQLQIAMYINSDAPGLKQ-QGLQKTMRGFSQRLKGKGGRFRQNLSGKRVDFSGR 380
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVI PDPNL +D+V +P RVA+ LTYPE+VT++N K+L V+ G + YPGAN++ D G
Sbjct: 381 TVIGPDPNLSIDEVAVPQRVAKILTYPEKVTRYNIKKLQKLVLNGANKYPGANYILKDLG 440
Query: 363 N------------KRFLRYGNR-KKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIM 503
R + G+R + A L G VVERHL DGD+VLFNRQPSLH++SI+
Sbjct: 441 PDQDPRKVSLIALSRHDKKGDRLQGPAAALRFGDVVERHLEDGDIVLFNRQPSLHKLSIL 500
Query: 504 SHSAKVVPHRTFRFNECVC 560
SH AK+ P RTFR NECVC
Sbjct: 501 SHRAKIRPWRTFRLNECVC 519
[153][TOP]
>UniRef100_Q4DZA9 DNA-directed RNA polymerase n=1 Tax=Trypanosoma cruzi
RepID=Q4DZA9_TRYCR
Length = 1553
Score = 208 bits (530), Expect = 2e-52
Identities = 108/186 (58%), Positives = 139/186 (74%), Gaps = 2/186 (1%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
WE LQ+ AAR ++S PP TA ++ +QRLKGK GRFRGNLSGKRVDFSGR+VI
Sbjct: 314 WEMLQMRAARLIDSALPGFPPHMRTAD-VKSYAQRLKGKHGRFRGNLSGKRVDFSGRSVI 372
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVE-TDDGNK 368
SPDPNL VD++ +PLRVAR LTYP+RV K N + + V GP+ +PGA V +G+K
Sbjct: 373 SPDPNLDVDELAVPLRVARVLTYPQRVFKSNLELMRRLVRNGPNVHPGAVAVYLAQEGSK 432
Query: 369 RFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545
+ L + +R+ ++ L +G VVERH+++GDVVLFNRQPSLHRIS+M+H A+V+P RTFRF
Sbjct: 433 KSLNHERDRESLSARLSIGDVVERHVMNGDVVLFNRQPSLHRISMMAHRARVLPFRTFRF 492
Query: 546 NECVCA 563
NEC CA
Sbjct: 493 NECCCA 498
[154][TOP]
>UniRef100_Q980R2 DNA-directed RNA polymerase subunit A' n=2 Tax=Sulfolobus
solfataricus RepID=RPOA1_SULSO
Length = 880
Score = 208 bits (530), Expect = 2e-52
Identities = 104/187 (55%), Positives = 136/187 (72%), Gaps = 2/187 (1%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W+ LQ A + +++ LPP + +PLR ++QRLKGK GRFRGNLSGKRVDFS R
Sbjct: 264 DLWDLLQYHVATYFDNEIPGLPPSKHRSGRPLRTLAQRLKGKEGRFRGNLSGKRVDFSSR 323
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPN+ +D+VG+P +A+TLT PER+T N ++L VI GPD +PGAN+V DG
Sbjct: 324 TVISPDPNISIDEVGVPEIIAKTLTVPERITPWNIEKLRQFVINGPDKWPGANYVIRPDG 383
Query: 363 NKRFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
+ LRY +RK++A L G ++ERHL+DGD+VLFNRQPSLHRIS+M+H +V+ TF
Sbjct: 384 RRIDLRYVKDRKELASTLAPGYIIERHLIDGDIVLFNRQPSLHRISMMAHRVRVLKGLTF 443
Query: 540 RFNECVC 560
R N VC
Sbjct: 444 RLNLLVC 450
[155][TOP]
>UniRef100_Q9V114 DNA-directed RNA polymerase n=1 Tax=Pyrococcus abyssi
RepID=Q9V114_PYRAB
Length = 907
Score = 208 bits (529), Expect = 3e-52
Identities = 96/186 (51%), Positives = 138/186 (74%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLA-STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W+ LQ ++N++ + +PP + +PL+ ++QRLKGK GRFRGNLSGKRV+FS R
Sbjct: 270 DLWDLLQYHVTTYINNETSGVPPAKHKSGRPLKTLAQRLKGKEGRFRGNLSGKRVNFSAR 329
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDP + +++VG+P+++A LT PE+VT+ N ++L V+ GPD YPGAN+V +G
Sbjct: 330 TVISPDPMISINEVGVPIQIAMELTVPEKVTEFNIEKLRKMVLNGPDKYPGANYVIDPEG 389
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+ + NR+ +A+ + +G VERHL+DGD+VLFNRQPSLHR+SIM+H +V+P+RTFR
Sbjct: 390 RRIRIMESNRENLARMIDIGWTVERHLLDGDIVLFNRQPSLHRMSIMAHRVRVMPYRTFR 449
Query: 543 FNECVC 560
N VC
Sbjct: 450 LNLAVC 455
[156][TOP]
>UniRef100_O59227 DNA-directed RNA polymerase n=1 Tax=Pyrococcus horikoshii
RepID=O59227_PYRHO
Length = 907
Score = 208 bits (529), Expect = 3e-52
Identities = 96/186 (51%), Positives = 138/186 (74%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLA-STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W+ LQ ++N++ + +PP + +PL+ ++QRLKGK GRFRGNLSGKRV+FS R
Sbjct: 270 DLWDLLQYHVTTYINNETSGVPPAKHKSGRPLKTLAQRLKGKEGRFRGNLSGKRVNFSAR 329
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDP + +++VG+P+++A LT PE+VT+ N ++L V+ GPD YPGAN+V +G
Sbjct: 330 TVISPDPMISINEVGVPIQIAMELTVPEKVTEFNIEKLRKMVLNGPDKYPGANYVIDPEG 389
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+ + N++ +AK + +G VERHLVDGD+VLFNRQPSLHR+SIM+H +V+P++TFR
Sbjct: 390 RRIRIMESNKENLAKMIDIGWTVERHLVDGDIVLFNRQPSLHRMSIMAHRVRVMPYKTFR 449
Query: 543 FNECVC 560
N VC
Sbjct: 450 LNLAVC 455
[157][TOP]
>UniRef100_Q5JE33 DNA-directed RNA polymerase n=1 Tax=Thermococcus kodakarensis
RepID=Q5JE33_PYRKO
Length = 906
Score = 207 bits (527), Expect = 4e-52
Identities = 100/186 (53%), Positives = 136/186 (73%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLA-STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W+ LQ ++N++ + +PP + +PL+ ++QRLKGK GRFRGNLSGKRV+FS R
Sbjct: 270 DLWDLLQYHVTTYINNETSGVPPAKHKSGRPLKTLAQRLKGKEGRFRGNLSGKRVNFSAR 329
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDP + +++VG+PL VA LT PE+VT+ N ++L V+ GP+ YPGAN+V +G
Sbjct: 330 TVISPDPMISINEVGVPLAVAMELTVPEKVTEFNYEKLKQRVLNGPEKYPGANYVIDPEG 389
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+ L NR+ +A+ L +G VERHL DGDVVLFNRQPSLHR+SIM+H +V+P+RTFR
Sbjct: 390 RRIRLMESNRELIAEKLDIGWTVERHLEDGDVVLFNRQPSLHRMSIMAHRVRVMPYRTFR 449
Query: 543 FNECVC 560
N VC
Sbjct: 450 LNLPVC 455
[158][TOP]
>UniRef100_A3DMP4 DNA-directed RNA polymerase n=1 Tax=Staphylothermus marinus F1
RepID=A3DMP4_STAMF
Length = 886
Score = 207 bits (527), Expect = 4e-52
Identities = 102/186 (54%), Positives = 134/186 (72%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D WE LQ + +++A +P + K L+G++QRLKGK GRFRGNL GKRVDFS R
Sbjct: 269 DEWELLQYHVTTYFDNEAPGIPVARHRSGKVLKGLAQRLKGKEGRFRGNLRGKRVDFSAR 328
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPN+ +++VG+P VA+ LT PERVT N + + V+ GPD +PGAN+V DG
Sbjct: 329 TVISPDPNISINEVGVPEVVAKILTVPERVTPWNIEEMRRLVLNGPDKWPGANYVIRPDG 388
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+ L+Y +RK +A+ L G +VERHL DGD+VLFNRQPSLHRISIM+H +V+P++TFR
Sbjct: 389 RRISLKYVDRKAMAETLAPGFIVERHLRDGDIVLFNRQPSLHRISIMAHVVRVLPYKTFR 448
Query: 543 FNECVC 560
N VC
Sbjct: 449 LNLLVC 454
[159][TOP]
>UniRef100_P31813 DNA-directed RNA polymerase subunit A' n=1 Tax=Thermococcus celer
RepID=RPOA1_THECE
Length = 905
Score = 207 bits (527), Expect = 4e-52
Identities = 99/186 (53%), Positives = 136/186 (73%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLA-STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W+ LQ ++N++ + +PP + +PL+ +SQRLKGK GRFRGNLSGKRV+FS R
Sbjct: 270 DLWDLLQYHVTTYINNETSGIPPAKHKSGRPLKTLSQRLKGKEGRFRGNLSGKRVNFSAR 329
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDP + +++VG+P+ +A LT PE+VT+ N ++L V+ GP+ YPGAN+V +G
Sbjct: 330 TVISPDPMISINEVGVPMAIAMELTVPEKVTEFNFEKLRKMVLNGPEKYPGANYVIDPEG 389
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+ L N + VA+ L +G VERHL+DGDVVLFNRQPSLHR+SIM+H +V+P+RTFR
Sbjct: 390 RRIRLMENNLETVAEKLDIGWTVERHLLDGDVVLFNRQPSLHRMSIMAHRVRVMPYRTFR 449
Query: 543 FNECVC 560
N VC
Sbjct: 450 LNLSVC 455
[160][TOP]
>UniRef100_A1RWW5 DNA-directed RNA polymerase n=1 Tax=Thermofilum pendens Hrk 5
RepID=A1RWW5_THEPD
Length = 888
Score = 207 bits (526), Expect = 6e-52
Identities = 101/183 (55%), Positives = 138/183 (75%), Gaps = 2/183 (1%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W LQ A + +++ +PP + +PLR ++QRLKGK GRFRG+L+GKRVDFS R
Sbjct: 268 DLWNLLQFHVATYFDNELPGIPPARHRSGRPLRTLAQRLKGKEGRFRGSLAGKRVDFSSR 327
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNL +++VG+P+ VA+ LT PE+VT N ++L VI GPD +PGAN++ DG
Sbjct: 328 TVISPDPNLSINEVGVPIDVAKVLTVPEKVTPWNIEKLRKLVINGPDVWPGANYIIKPDG 387
Query: 363 NKRFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
++ LRY +R+++++ L G +VERHL+DGDVVLFNRQPSLHRISIM+H KV+P++TF
Sbjct: 388 SRIDLRYVKHREEISQTLKPGYIVERHLMDGDVVLFNRQPSLHRISIMAHIVKVLPYKTF 447
Query: 540 RFN 548
R N
Sbjct: 448 RLN 450
[161][TOP]
>UniRef100_B9GIK9 DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa
RepID=B9GIK9_POPTR
Length = 1394
Score = 206 bits (525), Expect = 8e-52
Identities = 102/184 (55%), Positives = 128/184 (69%)
Frame = +3
Query: 9 GWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTV 188
GW+ LQ ++NSD +P +PL G QRL GK GRFR NL+GKRV+F+GRTV
Sbjct: 311 GWDELQAVVTLYINSDV-RIPLDMQVGRPLSGFVQRLTGKQGRFRQNLAGKRVEFTGRTV 369
Query: 189 ISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNK 368
ISPDPNL++ +V IP+ +AR LTYPERVT HN ++L V G YPGA V DG+
Sbjct: 370 ISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCVNNGSYKYPGARMVTYPDGSS 429
Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
+ L RK++A++L G +V RHL DGDVVLFNRQPSLHR+SIM H A+++P RT RFN
Sbjct: 430 KMLTGNYRKRIAEELKSGCIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFN 489
Query: 549 ECVC 560
E VC
Sbjct: 490 ESVC 493
[162][TOP]
>UniRef100_B2ADZ3 DNA-directed RNA polymerase n=1 Tax=Podospora anserina
RepID=B2ADZ3_PODAN
Length = 1521
Score = 206 bits (525), Expect = 8e-52
Identities = 107/194 (55%), Positives = 135/194 (69%), Gaps = 7/194 (3%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ WE+LQ++ ++NSD L K RG QRLKGK GRFRGNLSGKRVDFSGR
Sbjct: 324 MEQWEFLQLQVGMYVNSDVPGLVQ-QGFGKVTRGFCQRLKGKQGRFRGNLSGKRVDFSGR 382
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNL ++QV +P RVA+ LTYPERV +N ++L A V GP YPGA + + G
Sbjct: 383 TVISPDPNLSIEQVAVPERVAKNLTYPERVHANNIQKLKACVRNGPTEYPGALQITKNQG 442
Query: 363 NKRFLRYGNR-------KKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521
+ +++ + +K A +L +G VVERHL D D+VLFNRQPSLH++SIMSH AK+
Sbjct: 443 EENEMKFLLKHMKPHILEKNADNLRIGDVVERHLEDNDIVLFNRQPSLHKLSIMSHYAKI 502
Query: 522 VPHRTFRFNECVCA 563
P RTFR NECVC+
Sbjct: 503 RPWRTFRLNECVCS 516
[163][TOP]
>UniRef100_B6YT16 DNA-directed RNA polymerase n=1 Tax=Thermococcus onnurineus NA1
RepID=B6YT16_THEON
Length = 905
Score = 204 bits (520), Expect = 3e-51
Identities = 96/186 (51%), Positives = 136/186 (73%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLA-STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W+ LQ ++N++ + +PP + +PL+ ++QRLKGK GRFRGNLSGKRV+FS R
Sbjct: 270 DLWDLLQYHVTTYINNETSGIPPAKHKSGRPLKTLAQRLKGKEGRFRGNLSGKRVNFSAR 329
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDP + +++VG+P+ VA LT PE+VT+ N ++L V+ GP+ YPGAN+V +G
Sbjct: 330 TVISPDPMISINEVGVPIAVAMELTVPEKVTEFNYEKLKKMVLNGPEKYPGANYVIDPEG 389
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+ L N + +A+ L +G VERHL+DGD+VLFNRQPSLHR+SIM+H +V+P++TFR
Sbjct: 390 RRIRLMENNLEIIAEKLDIGWTVERHLLDGDIVLFNRQPSLHRMSIMAHRVRVMPYKTFR 449
Query: 543 FNECVC 560
N VC
Sbjct: 450 LNLAVC 455
[164][TOP]
>UniRef100_A2BN34 DNA-directed RNA polymerase n=1 Tax=Hyperthermus butylicus DSM 5456
RepID=A2BN34_HYPBU
Length = 881
Score = 204 bits (520), Expect = 3e-51
Identities = 100/184 (54%), Positives = 132/184 (71%), Gaps = 1/184 (0%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTA-KPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTV 188
W LQ A + +++ +P +PL+G++QRLKGK GRFRGNLSGKRVD+S RTV
Sbjct: 268 WTLLQYHVATYFDNELPRIPVARHRGGRPLKGLAQRLKGKEGRFRGNLSGKRVDYSARTV 327
Query: 189 ISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNK 368
ISPDPN+ +++VG+P+ +A+TLT VT N + + V+ GPD +PGAN+V T DG K
Sbjct: 328 ISPDPNISINEVGVPIEIAKTLTVRTPVTPWNIEEMRRYVLNGPDRWPGANYVITKDGRK 387
Query: 369 RFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
LRY +RK++A+ L G VERHL DGD+VLFNRQPSLHR+SIM+H KV+P +TFR N
Sbjct: 388 IDLRYADRKRIAEMLEPGWFVERHLRDGDIVLFNRQPSLHRMSIMAHIVKVLPGKTFRLN 447
Query: 549 ECVC 560
VC
Sbjct: 448 LLVC 451
[165][TOP]
>UniRef100_B8D6G9 DNA-directed RNA polymerase n=1 Tax=Desulfurococcus kamchatkensis
1221n RepID=B8D6G9_DESK1
Length = 886
Score = 204 bits (518), Expect = 5e-51
Identities = 99/186 (53%), Positives = 132/186 (70%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D WE LQ + +++ LP + K L+GI+QRLKGK GRFR NL GKRVDFS R
Sbjct: 269 DEWELLQYHITTYFDNEVPGLPVAKHRSGKTLKGIAQRLKGKEGRFRNNLRGKRVDFSAR 328
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDP+L +++VG+P VA+ LT PERVT N + + V+ GP+ +PGAN++ DG
Sbjct: 329 TVISPDPSLSINEVGVPEDVAKILTIPERVTPWNIEEMRKLVLNGPEKWPGANYIVRPDG 388
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K L++ +RK A+ L G +VERHL+DGD+VLFNRQPSLHRIS+M+H +V+P++TFR
Sbjct: 389 RKISLKFVDRKAAAESLESGFIVERHLMDGDIVLFNRQPSLHRISVMAHVVRVLPYKTFR 448
Query: 543 FNECVC 560
N VC
Sbjct: 449 LNLLVC 454
[166][TOP]
>UniRef100_B5IVZ9 DNA-directed RNA polymerase n=1 Tax=Thermococcus barophilus MP
RepID=B5IVZ9_9EURY
Length = 906
Score = 203 bits (516), Expect = 8e-51
Identities = 97/186 (52%), Positives = 134/186 (72%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLA-STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W+ LQ ++N++ + +P + +PL+ ++QRLKGK GRFRGNLSGKRV+FS R
Sbjct: 270 DLWDLLQYHVTTYINNETSGVPAAKHKSGRPLKTLAQRLKGKEGRFRGNLSGKRVNFSAR 329
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDP L +++VG+PL +A LT PE+VT N ++L V+ GP+ YPGAN+V G
Sbjct: 330 TVISPDPMLSINEVGVPLAIAMELTVPEKVTDFNIEKLRKMVLNGPEKYPGANYVIDPQG 389
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+ L NR+ +A+ L +G VERHL+DGD+VLFNRQPSLHR+SIM+H +V+P++TFR
Sbjct: 390 RRIRLMESNRETIAEMLDIGWTVERHLMDGDIVLFNRQPSLHRMSIMAHRVRVMPYKTFR 449
Query: 543 FNECVC 560
N VC
Sbjct: 450 LNLAVC 455
[167][TOP]
>UniRef100_C5A208 DNA-directed RNA polymerase n=1 Tax=Thermococcus gammatolerans EJ3
RepID=C5A208_THEGJ
Length = 905
Score = 202 bits (515), Expect = 1e-50
Identities = 96/186 (51%), Positives = 135/186 (72%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLA-STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W+ LQ ++N++ + +PP + +PL+ ++QRLKGK GRFRGNLSGKRV+FS R
Sbjct: 270 DLWDLLQYHVTTYINNETSGIPPAKHKSGRPLKTLAQRLKGKEGRFRGNLSGKRVNFSAR 329
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDP + +++VG+PL +A LT PE+VT+ N ++L V+ GP+ YPGAN+V +G
Sbjct: 330 TVISPDPMISINEVGVPLAIAMELTVPEKVTEFNFEKLKQRVLNGPEKYPGANYVIDPEG 389
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+ L N + +A+ L +G VERHL DGD+VLFNRQPSLHR+SIM+H +V+P++TFR
Sbjct: 390 RRIRLMENNLETIAERLDIGWTVERHLEDGDIVLFNRQPSLHRMSIMAHRVRVMPYKTFR 449
Query: 543 FNECVC 560
N VC
Sbjct: 450 LNLPVC 455
[168][TOP]
>UniRef100_A8A925 DNA-directed RNA polymerase n=1 Tax=Ignicoccus hospitalis KIN4/I
RepID=A8A925_IGNH4
Length = 889
Score = 202 bits (514), Expect = 1e-50
Identities = 103/185 (55%), Positives = 131/185 (70%), Gaps = 2/185 (1%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTV 188
W LQ A F +++ +PP + KPLR ++QRLKGK GRFR NLSGKRVDFS RTV
Sbjct: 275 WGLLQYHVATFFDNEIPGIPPARHRSGKPLRTLAQRLKGKEGRFRSNLSGKRVDFSARTV 334
Query: 189 ISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNK 368
ISPDPN+ +++VG+P+ VA+TLT P +VT N + + VI GPD +PGAN+V DG +
Sbjct: 335 ISPDPNISINEVGVPIEVAKTLTVPVKVTPWNIEEMRKLVINGPDKWPGANYVIMKDGRR 394
Query: 369 RFLRYG-NRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545
LRY +RK +A+ L G VERHL DGDVVLFNRQPSLHR+SIM+H +V+P +TFR
Sbjct: 395 IDLRYAKDRKIIAESLQPGWTVERHLQDGDVVLFNRQPSLHRMSIMAHLVRVLPGKTFRL 454
Query: 546 NECVC 560
VC
Sbjct: 455 CPLVC 459
[169][TOP]
>UniRef100_A7AP17 DNA-directed RNA polymerase n=1 Tax=Babesia bovis
RepID=A7AP17_BABBO
Length = 1541
Score = 202 bits (513), Expect = 2e-50
Identities = 102/186 (54%), Positives = 133/186 (71%), Gaps = 3/186 (1%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLA---STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
W+ LQ++ R +N++A + L + +KP RG+ QRLKGK GRFRGNLSGKRVDFS R
Sbjct: 362 WQCLQLQCTRLINAEAPAVSQLLVSRNISKPGRGVCQRLKGKEGRFRGNLSGKRVDFSAR 421
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPN+ VD+V +P +A LT+PE VT N + AV+ G +PGA +V+ +G
Sbjct: 422 TVISPDPNVGVDEVVVPEWIAMKLTFPEEVTDSNISIMKKAVLNGVSIWPGATYVKKQNG 481
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K L+Y N K ++ +L +G VV RHL +GDVVLFNRQPSLHR+SIM+H +V+P TFR
Sbjct: 482 GKCSLQYANPKYMSDNLTVGDVVLRHLWNGDVVLFNRQPSLHRMSIMAHRVRVMPGSTFR 541
Query: 543 FNECVC 560
FNECVC
Sbjct: 542 FNECVC 547
[170][TOP]
>UniRef100_Q8ZYQ8 DNA-directed RNA polymerase n=1 Tax=Pyrobaculum aerophilum
RepID=Q8ZYQ8_PYRAE
Length = 884
Score = 202 bits (513), Expect = 2e-50
Identities = 101/185 (54%), Positives = 135/185 (72%), Gaps = 2/185 (1%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTA-KPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTV 188
WE LQ A + +++ +P +PL+GI+QRLKGK GRFRG+LSGKRV+FS RTV
Sbjct: 276 WELLQYHVATYFDNELPGIPVAKHRGGRPLKGIAQRLKGKEGRFRGSLSGKRVNFSARTV 335
Query: 189 ISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNK 368
ISPDP++ +++VG+P +A+ LT PERVT N L VIRGP+++PGAN+V T +G +
Sbjct: 336 ISPDPHISINEVGVPYDIAKVLTVPERVTAWNVDVLREYVIRGPESWPGANYVVTPEGRR 395
Query: 369 RFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545
LRY +RK +A+ L G +VERHL+DGD+VLFNRQPSLHR+S+M H KV+P RTFR
Sbjct: 396 IDLRYVKDRKALAERLAPGWIVERHLIDGDIVLFNRQPSLHRVSMMGHLVKVLPGRTFRL 455
Query: 546 NECVC 560
+ VC
Sbjct: 456 HLAVC 460
[171][TOP]
>UniRef100_Q5KFV9 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q5KFV9_CRYNE
Length = 1466
Score = 201 bits (512), Expect = 2e-50
Identities = 103/191 (53%), Positives = 130/191 (68%), Gaps = 8/191 (4%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
WE L A ++NS A + + S KP+RG QRLKGK GRFRGNLSGKRVDFSGRTVI
Sbjct: 316 WEVLGQAVALYINSQAPGMQTIGS--KPIRGFVQRLKGKQGRFRGNLSGKRVDFSGRTVI 373
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKR 371
PDPNLR+D+V +P +VA L+YPERVT +N + + A+I G +PGAN +E N
Sbjct: 374 GPDPNLRIDEVAVPEKVAVKLSYPERVTDYNLQLMRQAIINGSKLHPGANVLERKHENGS 433
Query: 372 FLRYG--------NRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVP 527
+R RK+ A++L +G +V RH+ DGD+VLFNRQPSLH++SIM H +V P
Sbjct: 434 TVRISLNVMKDLEARKRYARELQIGDIVHRHVRDGDIVLFNRQPSLHKLSIMCHRVRVRP 493
Query: 528 HRTFRFNECVC 560
RTFR NECVC
Sbjct: 494 WRTFRLNECVC 504
[172][TOP]
>UniRef100_B7R289 DNA-directed RNA polymerase n=1 Tax=Thermococcus sp. AM4
RepID=B7R289_9EURY
Length = 905
Score = 201 bits (512), Expect = 2e-50
Identities = 96/186 (51%), Positives = 135/186 (72%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLA-STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W+ LQ ++N++ + +PP + +PL+ ++QRLKGK GRFRGNLSGKRV+FS R
Sbjct: 270 DLWDLLQYHVTTYINNETSGVPPAKHKSGRPLKTLAQRLKGKEGRFRGNLSGKRVNFSAR 329
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDP + +++VG+PL +A LT PE+VT+ N ++L V+ GP+ YPGAN+V +G
Sbjct: 330 TVISPDPMISINEVGVPLAIAMELTVPEKVTEFNFEKLRQRVLNGPEKYPGANYVIDPEG 389
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+ L N + +A+ L +G VERHL DGD+VLFNRQPSLHR+SIM+H +V+P++TFR
Sbjct: 390 RRIRLMENNLEIIAERLDIGWTVERHLEDGDIVLFNRQPSLHRMSIMAHRVRVMPYKTFR 449
Query: 543 FNECVC 560
N VC
Sbjct: 450 LNLPVC 455
[173][TOP]
>UniRef100_Q55QA7 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q55QA7_CRYNE
Length = 1466
Score = 201 bits (511), Expect = 3e-50
Identities = 103/191 (53%), Positives = 130/191 (68%), Gaps = 8/191 (4%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
WE L A ++NS A + + S KP+RG QRLKGK GRFRGNLSGKRVDFSGRTVI
Sbjct: 316 WEVLGQAVALYINSQAPGMQTIGS--KPIRGFVQRLKGKQGRFRGNLSGKRVDFSGRTVI 373
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKR 371
PDPNLR+D+V +P +VA L+YPERVT +N + + A+I G +PGAN +E N
Sbjct: 374 GPDPNLRIDEVAVPEKVAVKLSYPERVTDYNLQFMRQAIINGSKLHPGANVLERKHENGS 433
Query: 372 FLRYG--------NRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVP 527
+R RK+ A++L +G +V RH+ DGD+VLFNRQPSLH++SIM H +V P
Sbjct: 434 TVRISLNVMKDLEARKRYARELQIGDIVHRHVRDGDIVLFNRQPSLHKLSIMCHRVRVRP 493
Query: 528 HRTFRFNECVC 560
RTFR NECVC
Sbjct: 494 WRTFRLNECVC 504
[174][TOP]
>UniRef100_B1YC25 DNA-directed RNA polymerase n=1 Tax=Thermoproteus neutrophilus
V24Sta RepID=B1YC25_THENV
Length = 884
Score = 200 bits (509), Expect = 5e-50
Identities = 100/185 (54%), Positives = 136/185 (73%), Gaps = 2/185 (1%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTA-KPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTV 188
W+ LQ A + +++ +P +PL+GI+QRLKGK GRFRG+LSGKRV+FS RTV
Sbjct: 276 WDLLQYHVATYFDNELPGIPVAKHRGGRPLKGIAQRLKGKEGRFRGSLSGKRVNFSARTV 335
Query: 189 ISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNK 368
ISPDP++ +++VG+P +A+ LT PERVT+ N L V+RGP+T+PGAN+V T +G +
Sbjct: 336 ISPDPHISINEVGVPYDIAKILTVPERVTEWNVDVLREYVMRGPETWPGANYVITPEGRR 395
Query: 369 RFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545
LRY +++ +A+ L G +VERHLVDGD+VLFNRQPSLHR+SIM H KV+P RTFR
Sbjct: 396 IDLRYVKDKRALAERLAPGWIVERHLVDGDIVLFNRQPSLHRVSIMGHIVKVLPGRTFRL 455
Query: 546 NECVC 560
+ VC
Sbjct: 456 HLAVC 460
[175][TOP]
>UniRef100_Q38BW7 DNA-directed RNA polymerase n=1 Tax=Trypanosoma brucei
RepID=Q38BW7_9TRYP
Length = 1530
Score = 200 bits (508), Expect = 7e-50
Identities = 102/186 (54%), Positives = 135/186 (72%), Gaps = 2/186 (1%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
WE LQ+ AAR ++S PP T+ L+ +QRLK K GRFR NLSGKRVD+SGR+VI
Sbjct: 314 WEMLQMRAARLLDSSLPGFPPNVRTSD-LKSYAQRLKSKHGRFRCNLSGKRVDYSGRSVI 372
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVE-TDDGNK 368
SPDPNL VD++ +PL VAR LTYP+RV K N + + V GP +PGA V +G+K
Sbjct: 373 SPDPNLDVDELAVPLHVARVLTYPQRVFKANHELMRRLVRNGPHVHPGATTVYLAQEGSK 432
Query: 369 RFLR-YGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545
+ L+ +R ++A L +G +VERH+++GD+VLFNRQPSLHR+S+M+H A+V+P RTFRF
Sbjct: 433 KSLKNERDRHRLAARLAVGDIVERHVMNGDLVLFNRQPSLHRVSMMAHRARVLPFRTFRF 492
Query: 546 NECVCA 563
NEC CA
Sbjct: 493 NECCCA 498
[176][TOP]
>UniRef100_Q27900 DNA-directed RNA polymerase (Fragment) n=1 Tax=Euplotes
octocarinatus RepID=Q27900_EUPOC
Length = 511
Score = 200 bits (508), Expect = 7e-50
Identities = 98/183 (53%), Positives = 124/183 (67%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
W LQ A+++N+D LP K +R QRLKGK GRFRGNLSGKRVDFSGRTVI
Sbjct: 319 WNQLQYTLAQYINADTPGLPLNMVGNKAIRAFCQRLKGKQGRFRGNLSGKRVDFSGRTVI 378
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKR 371
SPDPN + QV +P+ +A+ T+P V +N + L + G + +PGANFV+ +G K
Sbjct: 379 SPDPNAEIGQVIVPVDMAKIFTFPVCVNSYNIEFLKKLIKNGSEVHPGANFVQFQNGIKM 438
Query: 372 FLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFNE 551
+R N + K+L G +VERHL+DGD VLFNRQPSLHR+SIM H AKV+P +T RFNE
Sbjct: 439 KIRENNSSVICKELKYGDIVERHLIDGDSVLFNRQPSLHRLSIMCHKAKVMPWKTLRFNE 498
Query: 552 CVC 560
C C
Sbjct: 499 CCC 501
[177][TOP]
>UniRef100_D0A1W8 DNA-directed RNA polymerase iii largest subunit (Rna polymerase iii
largest subunit, putative) n=1 Tax=Trypanosoma brucei
gambiense DAL972 RepID=D0A1W8_TRYBG
Length = 1530
Score = 200 bits (508), Expect = 7e-50
Identities = 102/186 (54%), Positives = 135/186 (72%), Gaps = 2/186 (1%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
WE LQ+ AAR ++S PP T+ L+ +QRLK K GRFR NLSGKRVD+SGR+VI
Sbjct: 314 WEMLQMRAARLLDSSLPGFPPNVRTSD-LKSYAQRLKSKHGRFRCNLSGKRVDYSGRSVI 372
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVE-TDDGNK 368
SPDPNL VD++ +PL VAR LTYP+RV K N + + V GP +PGA V +G+K
Sbjct: 373 SPDPNLDVDELAVPLHVARVLTYPQRVFKANHELMRRLVRNGPHVHPGATTVYLAQEGSK 432
Query: 369 RFLR-YGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545
+ L+ +R ++A L +G +VERH+++GD+VLFNRQPSLHR+S+M+H A+V+P RTFRF
Sbjct: 433 KSLKNERDRHRLAARLAVGDIVERHVMNGDLVLFNRQPSLHRVSMMAHRARVLPFRTFRF 492
Query: 546 NECVCA 563
NEC CA
Sbjct: 493 NECCCA 498
[178][TOP]
>UniRef100_P08968 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Trypanosoma
brucei brucei RepID=RPC1_TRYBB
Length = 1530
Score = 200 bits (508), Expect = 7e-50
Identities = 102/186 (54%), Positives = 135/186 (72%), Gaps = 2/186 (1%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
WE LQ+ AAR ++S PP T+ L+ +QRLK K GRFR NLSGKRVD+SGR+VI
Sbjct: 314 WEMLQMRAARLLDSSLPGFPPNVRTSD-LKSYAQRLKSKHGRFRCNLSGKRVDYSGRSVI 372
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVE-TDDGNK 368
SPDPNL VD++ +PL VAR LTYP+RV K N + + V GP +PGA V +G+K
Sbjct: 373 SPDPNLDVDELAVPLHVARVLTYPQRVFKANHELMRRLVRNGPHVHPGATTVYLAQEGSK 432
Query: 369 RFLR-YGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545
+ L+ +R ++A L +G +VERH+++GD+VLFNRQPSLHR+S+M+H A+V+P RTFRF
Sbjct: 433 KSLKNERDRHRLAARLAVGDIVERHVMNGDLVLFNRQPSLHRVSMMAHRARVLPFRTFRF 492
Query: 546 NECVCA 563
NEC CA
Sbjct: 493 NECCCA 498
[179][TOP]
>UniRef100_A4WN99 DNA-directed RNA polymerase n=1 Tax=Pyrobaculum arsenaticum DSM
13514 RepID=A4WN99_PYRAR
Length = 884
Score = 199 bits (505), Expect = 2e-49
Identities = 101/185 (54%), Positives = 134/185 (72%), Gaps = 2/185 (1%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTA-KPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTV 188
W+ LQ A + +++ +P +PL+GI+QRLKGK GRFRG+LSGKRV+FS RTV
Sbjct: 276 WDLLQYHVATYFDNELPGIPVAKHRGGRPLKGIAQRLKGKEGRFRGSLSGKRVNFSARTV 335
Query: 189 ISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNK 368
ISPDP++ +++VG+P +A+ LT PE+VT N L VIRGP+T+PGAN+V T +G +
Sbjct: 336 ISPDPHISINEVGVPTDIAKILTVPEKVTAWNIDVLREYVIRGPETWPGANYVVTPEGRR 395
Query: 369 RFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545
LRY +RK +A+ L G VVERHL DGD+VLFNRQPSLHR+S+M H KV+P RTFR
Sbjct: 396 IDLRYVKDRKALAERLAPGWVVERHLRDGDIVLFNRQPSLHRVSMMGHLVKVLPGRTFRL 455
Query: 546 NECVC 560
+ VC
Sbjct: 456 HLAVC 460
[180][TOP]
>UniRef100_A2DEX5 DNA-directed RNA polymerase n=1 Tax=Trichomonas vaginalis G3
RepID=A2DEX5_TRIVA
Length = 1657
Score = 198 bits (504), Expect = 2e-49
Identities = 107/189 (56%), Positives = 131/189 (69%), Gaps = 2/189 (1%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTA-KPLRGISQRLKGKTGRFRGNLSGKRVDFSG 179
M+ W LQ +NS+A + KP+ G+ QRLKGK GRFR NLSGKRV++SG
Sbjct: 281 MELWSSLQQNVNSSINSEAADTAAKTKKKNKPVIGVIQRLKGKQGRFRTNLSGKRVNYSG 340
Query: 180 RTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGA-NFVETD 356
RTVISPDPN+ VDQV IP+ +A+ LT+P RVTK N+K L V GPD YPGA N ++ D
Sbjct: 341 RTVISPDPNVNVDQVVIPVSMAKILTFPTRVTKFNKKDLMRYVKNGPDKYPGANNIIKAD 400
Query: 357 DGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536
G K L YGN+++ A++L G +VERHL+D D VLFNRQPSLHRISIM AKV+ T
Sbjct: 401 TGFKLSLAYGNKEQRAQELREGDIVERHLLDNDTVLFNRQPSLHRISIMGFRAKVMEWCT 460
Query: 537 FRFNECVCA 563
RFNE VCA
Sbjct: 461 MRFNESVCA 469
[181][TOP]
>UniRef100_A1RSE8 DNA-directed RNA polymerase n=1 Tax=Pyrobaculum islandicum DSM 4184
RepID=A1RSE8_PYRIL
Length = 884
Score = 198 bits (504), Expect = 2e-49
Identities = 101/185 (54%), Positives = 134/185 (72%), Gaps = 2/185 (1%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTA-KPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTV 188
W+ LQ A + +++ +P +PL+GI+QRLKGK GRFRG+LSGKRV+FS RTV
Sbjct: 276 WDLLQYHIATYFDNELPGIPVAKHRGGRPLKGIAQRLKGKEGRFRGSLSGKRVNFSARTV 335
Query: 189 ISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNK 368
ISPDP++ +++VG+P VA+ LT PERVT N L VIRGP+T+PGAN+V T +G +
Sbjct: 336 ISPDPHISINEVGVPYDVAKILTVPERVTPWNVDILREYVIRGPETWPGANYVVTPEGRR 395
Query: 369 RFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545
LRY +R+ +A+ L G +VERHL DGD+VLFNRQPSLHR+S+M H KV+P RTFR
Sbjct: 396 IDLRYVKDRRALAERLAPGWIVERHLRDGDIVLFNRQPSLHRVSMMGHLVKVLPGRTFRL 455
Query: 546 NECVC 560
+ VC
Sbjct: 456 HLAVC 460
[182][TOP]
>UniRef100_A3MXZ0 DNA-directed RNA polymerase n=1 Tax=Pyrobaculum calidifontis JCM
11548 RepID=A3MXZ0_PYRCJ
Length = 884
Score = 198 bits (503), Expect = 3e-49
Identities = 98/185 (52%), Positives = 134/185 (72%), Gaps = 2/185 (1%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLASTA-KPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTV 188
W+ LQ A + +++ +P +PL+GI+QRLKGK GRFRG+LS KRV+FS RTV
Sbjct: 276 WDLLQYHVATYFDNELPGIPVAKHRGGRPLKGIAQRLKGKEGRFRGSLSSKRVNFSARTV 335
Query: 189 ISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNK 368
ISPDP++ +++VG+P+ +A+ LT PERVT N L V+RGP+ +PGAN+V T +G +
Sbjct: 336 ISPDPHISINEVGVPIDIAKVLTVPERVTTWNIDALREYVLRGPEAWPGANYVITPEGRR 395
Query: 369 RFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545
LRY +R+ +A+ L G +VERHLVDGD+VLFNRQPSLHR+S+M H KV+P RTFR
Sbjct: 396 IDLRYVKDRRALAERLAPGWIVERHLVDGDIVLFNRQPSLHRVSMMGHLVKVLPGRTFRL 455
Query: 546 NECVC 560
+ VC
Sbjct: 456 HLAVC 460
[183][TOP]
>UniRef100_A4HAF0 DNA-directed RNA polymerase n=1 Tax=Leishmania braziliensis
RepID=A4HAF0_LEIBR
Length = 1581
Score = 196 bits (499), Expect = 8e-49
Identities = 99/189 (52%), Positives = 131/189 (69%), Gaps = 2/189 (1%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
++ WE LQ AR +++ P T + + +QR+KGK GRFRGNLSGKRVDFSGR
Sbjct: 306 VETWELLQTRVARLLDAALPGFPSHLRTTE-CKSYAQRMKGKQGRFRGNLSGKRVDFSGR 364
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGA--NFVETD 356
+VISPDPNLR+D++ +PLRVAR LTYP+RV N + + V GP +PGA ++ +
Sbjct: 365 SVISPDPNLRIDELAVPLRVARVLTYPQRVFAGNIQLMRRLVRNGPHVHPGALTVYLSKE 424
Query: 357 DGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536
K +R+ +A L +G VVERH+++GD VLFNRQPSLHRIS+M+H A+V+P RT
Sbjct: 425 CSRKSLRNARDREAIAARLSIGDVVERHVMNGDYVLFNRQPSLHRISLMAHRARVLPFRT 484
Query: 537 FRFNECVCA 563
FRFNEC CA
Sbjct: 485 FRFNECCCA 493
[184][TOP]
>UniRef100_Q4Q3H2 DNA-directed RNA polymerase n=1 Tax=Leishmania major
RepID=Q4Q3H2_LEIMA
Length = 1582
Score = 196 bits (498), Expect = 1e-48
Identities = 98/189 (51%), Positives = 131/189 (69%), Gaps = 2/189 (1%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
++ WE LQ AR +++ P T + + +QR+KGK GRFRGNLSGKRVDFSGR
Sbjct: 306 VETWELLQTRVARLLDAALPGFPSHLRTVE-CKSYAQRMKGKQGRFRGNLSGKRVDFSGR 364
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGA--NFVETD 356
+VISPDPNLR+D++ +PLRVAR LTYP+RV N + + V GP +PGA ++ +
Sbjct: 365 SVISPDPNLRIDELAVPLRVARVLTYPQRVFAGNIQLMRRLVRNGPHVHPGALTVYLSKE 424
Query: 357 DGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536
K +R+ +A L +G VVERH+++GD +LFNRQPSLHRIS+M+H A+V+P RT
Sbjct: 425 CSRKSLRNARDREAIAARLSIGDVVERHVMNGDYILFNRQPSLHRISLMAHRARVLPFRT 484
Query: 537 FRFNECVCA 563
FRFNEC CA
Sbjct: 485 FRFNECCCA 493
[185][TOP]
>UniRef100_A4I9K6 DNA-directed RNA polymerase n=1 Tax=Leishmania infantum
RepID=A4I9K6_LEIIN
Length = 1590
Score = 196 bits (498), Expect = 1e-48
Identities = 98/189 (51%), Positives = 131/189 (69%), Gaps = 2/189 (1%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
++ WE LQ AR +++ P T + + +QR+KGK GRFRGNLSGKRVDFSGR
Sbjct: 306 VETWELLQTRVARLLDAALPGFPSHLRTVE-CKSYAQRMKGKQGRFRGNLSGKRVDFSGR 364
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGA--NFVETD 356
+VISPDPNLR+D++ +PLRVAR LTYP+RV N + + V GP +PGA ++ +
Sbjct: 365 SVISPDPNLRIDELAVPLRVARVLTYPQRVFAGNIQLMRRLVRNGPHVHPGALTVYLSKE 424
Query: 357 DGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536
K +R+ +A L +G VVERH+++GD +LFNRQPSLHRIS+M+H A+V+P RT
Sbjct: 425 CSRKSLRNARDREAIAARLSIGDVVERHVMNGDYILFNRQPSLHRISLMAHRARVLPFRT 484
Query: 537 FRFNECVCA 563
FRFNEC CA
Sbjct: 485 FRFNECCCA 493
[186][TOP]
>UniRef100_B6QI35 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC
18224 RepID=B6QI35_PENMQ
Length = 1439
Score = 196 bits (498), Expect = 1e-48
Identities = 98/189 (51%), Positives = 132/189 (69%), Gaps = 3/189 (1%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W+++ ++ A ++N D L KP R + RLKGK GRFRGNLSGKRVDFSGR
Sbjct: 320 MECWDYMTLQIAIYINGDVPGLK--GEAGKPTRSLVSRLKGKQGRFRGNLSGKRVDFSGR 377
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGA-NFVETDD 359
TVISPDPNLR+D+V +P VA+ +TYPE VT++N + L V G + +PGA ++ D
Sbjct: 378 TVISPDPNLRIDEVAVPELVAKNMTYPEIVTRYNLEYLQKLVRNGINKWPGAKKVIKKDS 437
Query: 360 GNKRFLRYGNRK--KVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHR 533
G L++ + ++K L +G +VERHLVDGD+ L+NRQPSLH++SI+SH KV P+R
Sbjct: 438 GLTISLKHSAKSLDTISKQLQIGDLVERHLVDGDIALYNRQPSLHKLSILSHFVKVRPYR 497
Query: 534 TFRFNECVC 560
TFR NECVC
Sbjct: 498 TFRMNECVC 506
[187][TOP]
>UniRef100_Q8TRB7 DNA-directed RNA polymerase n=1 Tax=Methanosarcina acetivorans
RepID=Q8TRB7_METAC
Length = 880
Score = 196 bits (498), Expect = 1e-48
Identities = 98/186 (52%), Positives = 129/186 (69%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D WE LQ F ++ + +PP + +PL+ +SQRLKGK GRFRG+LSGKRV+FS R
Sbjct: 264 DLWELLQYHVTTFFDNSVSGIPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSAR 323
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNL +++VG+P+ +ARTLT P VT N ++L V G D +PGAN+V DG
Sbjct: 324 TVISPDPNLSINEVGVPMPIARTLTIPAVVTPRNIEQLKVYVRNGEDIHPGANYVFRSDG 383
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+ + N+ +A+ L G VER L DGD VLFNRQPSLH++SIM+HS KV+P++TFR
Sbjct: 384 RRIKVTNMNKDDLAEKLEFGWTVERQLKDGDTVLFNRQPSLHKMSIMAHSVKVLPNKTFR 443
Query: 543 FNECVC 560
N VC
Sbjct: 444 LNPAVC 449
[188][TOP]
>UniRef100_B8MLB5 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC
10500 RepID=B8MLB5_TALSN
Length = 1441
Score = 196 bits (497), Expect = 1e-48
Identities = 99/189 (52%), Positives = 131/189 (69%), Gaps = 3/189 (1%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
M+ W+++ ++ A ++N D L KP R + RLKGK GRFRGNLSGKRVDFSGR
Sbjct: 321 MECWDYMTLQIAIYINGDVPGLK--GEAGKPTRSLVSRLKGKQGRFRGNLSGKRVDFSGR 378
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGA-NFVETDD 359
TVISPDPNLR+D+V +P VA+ +TYPE VT++N + L V G + +PGA ++ D
Sbjct: 379 TVISPDPNLRIDEVAVPELVAKNMTYPEIVTRYNLEYLRKLVRNGINKWPGAKKVIKKDS 438
Query: 360 GNKRFLRYGNRK--KVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHR 533
G L++ R +A L +G +VERHLVDGD+ L+NRQPSLH++SI+SH KV P+R
Sbjct: 439 GLTISLKHSARSLDLIAAQLQIGDLVERHLVDGDIALYNRQPSLHKLSILSHFVKVRPYR 498
Query: 534 TFRFNECVC 560
TFR NECVC
Sbjct: 499 TFRMNECVC 507
[189][TOP]
>UniRef100_O27125 DNA-directed RNA polymerase subunit A' n=1 Tax=Methanothermobacter
thermautotrophicus str. Delta H RepID=RPOA1_METTH
Length = 870
Score = 196 bits (497), Expect = 1e-48
Identities = 94/186 (50%), Positives = 132/186 (70%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D WE LQ + +++A+ +PP + +PL+ ++QRLKGK GRFR NLSGKRV+FS R
Sbjct: 260 DLWELLQYHVTTYFDNEASGVPPARHRSGRPLKTLAQRLKGKEGRFRSNLSGKRVNFSAR 319
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPN+ +++VG+P +AR +T P VT+ N R+ + GPD +PGAN+V DG
Sbjct: 320 TVISPDPNISINEVGVPEIIAREVTVPVYVTEWNIDRMREYIENGPDVHPGANYVIRPDG 379
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K + ++ V ++L G +VERHL DGD+VLFNRQPSLHR+S+M+H +V+P++TFR
Sbjct: 380 RKIRIYNETKEVVLENLKPGYIVERHLKDGDIVLFNRQPSLHRMSMMAHQVRVLPYKTFR 439
Query: 543 FNECVC 560
N CVC
Sbjct: 440 LNLCVC 445
[190][TOP]
>UniRef100_Q0W8G9 DNA-directed RNA polymerase n=1 Tax=uncultured methanogenic
archaeon RC-I RepID=Q0W8G9_UNCMA
Length = 877
Score = 195 bits (496), Expect = 2e-48
Identities = 96/187 (51%), Positives = 133/187 (71%), Gaps = 1/187 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D WE LQ +M++ + +PP + +PL+ +SQRLKGK GRFRG+LSGKRV+FS R
Sbjct: 259 DLWELLQYHVTTYMDNAVSGVPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSAR 318
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNL +++VG+PLR+A+ +T P VT N + + V RG + +PGAN+V+ DG
Sbjct: 319 TVISPDPNLSINEVGVPLRIAKEMTVPVTVTPFNIEVVREYVRRGSENHPGANYVKRADG 378
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+ + N +++A + +G V+R L DGD+VLFNRQPSLHR+SIMSH +V+PH+TFR
Sbjct: 379 RRLKITDKNCEELADQIEVGWKVDRQLKDGDIVLFNRQPSLHRMSIMSHFVRVMPHKTFR 438
Query: 543 FNECVCA 563
N VCA
Sbjct: 439 LNPAVCA 445
[191][TOP]
>UniRef100_Q464Y7 DNA-directed RNA polymerase n=1 Tax=Methanosarcina barkeri str.
Fusaro RepID=Q464Y7_METBF
Length = 880
Score = 194 bits (494), Expect = 3e-48
Identities = 97/186 (52%), Positives = 129/186 (69%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D WE LQ F ++ + +PP + +PL+ +SQRLKGK GRFRG+LSGKRV+FS R
Sbjct: 264 DLWELLQYHVTTFFDNSVSGIPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSAR 323
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNL +++VG+P+ +AR LT P VT N ++L V G D +PGAN+V DG
Sbjct: 324 TVISPDPNLSINEVGVPMPIARILTMPSVVTPRNIEQLKIYVRNGEDIHPGANYVLRPDG 383
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+ + N+ +A+ L G VER L DGD+VLFNRQPSLH++SIM+HS KV+P++TFR
Sbjct: 384 RRIKVTNVNKDDLAEKLEFGWTVERQLKDGDIVLFNRQPSLHKMSIMAHSVKVLPNKTFR 443
Query: 543 FNECVC 560
N VC
Sbjct: 444 LNPAVC 449
[192][TOP]
>UniRef100_C6A1G0 DNA-directed RNA polymerase n=1 Tax=Thermococcus sibiricus MM 739
RepID=C6A1G0_THESM
Length = 905
Score = 194 bits (493), Expect = 4e-48
Identities = 93/186 (50%), Positives = 131/186 (70%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLA-STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W+ LQ + +++ + +PP + +PL+ ++QRLKGK GRFR NLSGKRV+FS R
Sbjct: 270 DLWDLLQYHVTTYFDNETSGIPPAKHKSGRPLKTLAQRLKGKEGRFRKNLSGKRVNFSAR 329
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDP + +++VG+PL VA LT PE+VT N ++L ++ GP+ YPGAN+V G
Sbjct: 330 TVISPDPMISINEVGVPLIVAMELTVPEKVTDFNLEKLRKMILNGPEKYPGANYVIDPQG 389
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+ L N + +A + +G VERHL++GDVVLFNRQPSLHR+SIM+H +V+P++TFR
Sbjct: 390 RRIRLMESNLETIADMIDIGWTVERHLMNGDVVLFNRQPSLHRMSIMAHRVRVMPYKTFR 449
Query: 543 FNECVC 560
N VC
Sbjct: 450 LNLAVC 455
[193][TOP]
>UniRef100_Q2NEK4 DNA-directed RNA polymerase n=1 Tax=Methanosphaera stadtmanae DSM
3091 RepID=Q2NEK4_METST
Length = 873
Score = 194 bits (492), Expect = 5e-48
Identities = 89/186 (47%), Positives = 133/186 (71%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D WE LQ + +++A+ +PP + +PL+ ++QRLKGK GRFR NL+GKRV+FS R
Sbjct: 260 DLWELLQYHVTTYFDNEASGVPPARHRSGRPLKTLAQRLKGKEGRFRSNLAGKRVNFSAR 319
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDP L +++VG+P +A+ +T P VT+ N +++ + GPD +PGAN++ DG
Sbjct: 320 TVISPDPTLSINEVGVPEMIAKEVTVPIAVTEWNMEKMKEYINNGPDVHPGANYIIRPDG 379
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K + ++ V ++L G +VERH++DGD+VLFNRQPSLHR+S+M+H +V+P++TFR
Sbjct: 380 RKIRVYDETKEMVVENLKPGYIVERHIIDGDIVLFNRQPSLHRMSMMAHEVRVLPYKTFR 439
Query: 543 FNECVC 560
N CVC
Sbjct: 440 LNLCVC 445
[194][TOP]
>UniRef100_A0B558 DNA-directed RNA polymerase n=1 Tax=Methanosaeta thermophila PT
RepID=A0B558_METTP
Length = 876
Score = 194 bits (492), Expect = 5e-48
Identities = 96/186 (51%), Positives = 131/186 (70%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D WE LQ F+++ + +PP + +PL+ +SQRLKGK GRFRG+LSGKRV+FS R
Sbjct: 260 DLWELLQYHVTTFLDNTVSGVPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSAR 319
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISP PNL +++VG+P+ VA+ LT P VT N + + V+RGPD +PG N+V DG
Sbjct: 320 TVISPYPNLSINEVGVPIEVAKELTVPIMVTPKNIEVVRKYVMRGPDNHPGVNYVTRADG 379
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+ + N ++VA+ L +G V+R L DGD+VLFNRQPSLHR+SIM+H KV+P++TFR
Sbjct: 380 RRVKVTERNCQEVAEQLEVGWKVDRQLADGDIVLFNRQPSLHRMSIMAHRVKVMPYKTFR 439
Query: 543 FNECVC 560
N VC
Sbjct: 440 LNPAVC 445
[195][TOP]
>UniRef100_Q8PUR1 DNA-directed RNA polymerase n=1 Tax=Methanosarcina mazei
RepID=Q8PUR1_METMA
Length = 880
Score = 193 bits (491), Expect = 7e-48
Identities = 96/186 (51%), Positives = 129/186 (69%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D WE LQ F ++ + +PP + +PL+ +SQRLKGK GRFRG+LSGKRV+FS R
Sbjct: 264 DLWELLQYHVTTFFDNSVSGIPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSAR 323
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPNL +++VG+P+ +A+ LT P VT N ++L V G D +PGAN+V DG
Sbjct: 324 TVISPDPNLSINEVGVPMPIAKILTMPAVVTPRNIEQLKVYVRNGEDIHPGANYVFRSDG 383
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+ + N++ +A+ L G VER L DGD VLFNRQPSLH++SIM+HS KV+P++TFR
Sbjct: 384 RRIKVTNMNKEDLAEKLEFGWTVERQLKDGDTVLFNRQPSLHKMSIMAHSVKVLPNKTFR 443
Query: 543 FNECVC 560
N VC
Sbjct: 444 LNPAVC 449
[196][TOP]
>UniRef100_P09846 DNA-directed RNA polymerase subunit A' n=1 Tax=Methanothermobacter
thermautotrophicus str. Winter RepID=RPOA1_METTW
Length = 865
Score = 192 bits (489), Expect = 1e-47
Identities = 93/186 (50%), Positives = 130/186 (69%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D WE LQ + +++A+ +PP + +PL+ ++QRLKGK GRFR NLSGKRV+FS R
Sbjct: 260 DLWELLQYHVTTYFDNEASGVPPARHRSGRPLKTLAQRLKGKEGRFRSNLSGKRVNFSAR 319
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TV+SPDPN+ V++VG+P +A+ +T P VT+ N R+ + GPD +PGAN+V DG
Sbjct: 320 TVVSPDPNVSVNEVGVPELIAKEVTVPVYVTEWNIDRMKEHIENGPDVHPGANYVIRPDG 379
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K + V ++L G +VERHL DGD+VLFNRQPSLHR+S+M+H +V+P++TFR
Sbjct: 380 RKIRAYNETKDVVLENLKPGYIVERHLKDGDIVLFNRQPSLHRMSMMAHEVRVLPYKTFR 439
Query: 543 FNECVC 560
N CVC
Sbjct: 440 LNLCVC 445
[197][TOP]
>UniRef100_A9BK83 DNA-directed RNA polymerase n=1 Tax=Cryptophyta RepID=A9BK83_9CRYP
Length = 1323
Score = 192 bits (487), Expect = 2e-47
Identities = 93/185 (50%), Positives = 129/185 (69%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRT 185
D W LQ+E +++NS+A NL S + + + RLKGK GRFRGNLSGKRV+FSGRT
Sbjct: 289 DTWSILQIECGKYLNSEAFNLE---SGKQKFKSLFNRLKGKNGRFRGNLSGKRVNFSGRT 345
Query: 186 VISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGN 365
VISPDPNL ++ +G+P+ +A LT+PERV K N +RL V+RG +PGANF+ N
Sbjct: 346 VISPDPNLPLNFLGLPIILATKLTFPERVNKFNIERLQRTVLRGATRFPGANFLIDLKNN 405
Query: 366 KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRF 545
K+ + ++KK ++ G +ERHL + D++LFNRQPSLHRISIM+H K++ +T +
Sbjct: 406 KKHIENLSKKKEHLEIKSGYKIERHLKNNDIILFNRQPSLHRISIMAHRTKIISGKTLKI 465
Query: 546 NECVC 560
NEC+C
Sbjct: 466 NECIC 470
[198][TOP]
>UniRef100_A9A9V0 DNA-directed RNA polymerase n=1 Tax=Methanococcus maripaludis C6
RepID=A9A9V0_METM6
Length = 889
Score = 191 bits (486), Expect = 3e-47
Identities = 97/194 (50%), Positives = 135/194 (69%), Gaps = 9/194 (4%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W+ LQ + +++A +PP + +PLR ++QRLKGK GRFR NL+GKRV+FS R
Sbjct: 267 DLWDLLQYHINTYFDNEAPGIPPARHRSGRPLRTLAQRLKGKEGRFRHNLAGKRVNFSAR 326
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF----VE 350
TVISPDP L +++VGIP +A+ LT PE+VT +N +R+ A + G DT+PG N+ V+
Sbjct: 327 TVISPDPRLSINEVGIPKLIAKELTVPEKVTPYNIERVRALLRNGADTHPGVNYVIKKVK 386
Query: 351 TDDGNKRFLRY----GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAK 518
T DG + + N++ +++ G V+ERHL DGDVVL+NRQPSLHR+SIM+H K
Sbjct: 387 TKDGKEEEYKIKITDANKEMWVENITDGMVIERHLSDGDVVLYNRQPSLHRMSIMAHKVK 446
Query: 519 VVPHRTFRFNECVC 560
V+P+RTFR N CVC
Sbjct: 447 VLPYRTFRHNLCVC 460
[199][TOP]
>UniRef100_Q2PYR9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Conidiobolus
coronatus RepID=Q2PYR9_9FUNG
Length = 749
Score = 191 bits (484), Expect = 4e-47
Identities = 95/179 (53%), Positives = 126/179 (70%), Gaps = 1/179 (0%)
Frame = +3
Query: 15 EWLQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVI 191
++LQ A +M++D LP L + +P++ I RLKGK GR RGNL GKRVDFS RTVI
Sbjct: 224 QYLQYHVATYMDNDIAGLPQSLQKSGRPIKSIRARLKGKEGRLRGNLMGKRVDFSARTVI 283
Query: 192 SPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKR 371
+ DPNL +DQVG+P +AR LTYPERVT +N +RL AV GP+ +PGA +V D G +
Sbjct: 284 TGDPNLSIDQVGVPRSIARNLTYPERVTPYNIQRLREAVRNGPNVHPGAKYVIRDTGERI 343
Query: 372 FLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
LR+ R+ L +G +VERH++D DVV+FNRQPSLH++S+M H KV+P+ TFR N
Sbjct: 344 DLRH-YRRNAEVPLMVGYIVERHIIDNDVVIFNRQPSLHKMSMMGHLIKVMPYSTFRLN 401
[200][TOP]
>UniRef100_A6VGU9 DNA-directed RNA polymerase n=1 Tax=Methanococcus maripaludis C7
RepID=A6VGU9_METM7
Length = 889
Score = 191 bits (484), Expect = 4e-47
Identities = 97/194 (50%), Positives = 134/194 (69%), Gaps = 9/194 (4%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W+ LQ + +++A +PP + +PLR ++QRLKGK GRFR NL+GKRV+FS R
Sbjct: 267 DLWDLLQYHINTYFDNEAPGIPPARHRSGRPLRTLAQRLKGKEGRFRHNLAGKRVNFSAR 326
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF----VE 350
TVISPDP L +++VGIP +A+ LT PE+VT +N +R+ A + G DT+PG N+ V+
Sbjct: 327 TVISPDPRLSINEVGIPKLIAKELTVPEKVTPYNIERVRALLRNGADTHPGVNYVIKKVK 386
Query: 351 TDDGNKRFLRY----GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAK 518
T DG + + N+ +++ G V+ERHL DGDVVL+NRQPSLHR+SIM+H K
Sbjct: 387 TKDGKEEEYKIKITDANKDMWVENITDGMVIERHLSDGDVVLYNRQPSLHRMSIMAHKVK 446
Query: 519 VVPHRTFRFNECVC 560
V+P+RTFR N CVC
Sbjct: 447 VLPYRTFRHNLCVC 460
[201][TOP]
>UniRef100_A6UV50 DNA-directed RNA polymerase n=1 Tax=Methanococcus aeolicus Nankai-3
RepID=A6UV50_META3
Length = 888
Score = 190 bits (482), Expect = 7e-47
Identities = 96/194 (49%), Positives = 133/194 (68%), Gaps = 9/194 (4%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W+ LQ + +++A PP + +PLR I+QRLKGK GRFR NL+GKRV+FS R
Sbjct: 267 DLWDLLQYHINTYFDNEAPGTPPARHRSGRPLRTIAQRLKGKEGRFRHNLAGKRVNFSAR 326
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF----VE 350
TVISPDP L +++VGIP ++A+ LT PE+VTK+N ++ + G D +PG N+ V+
Sbjct: 327 TVISPDPRLSINEVGIPKQIAKELTIPEKVTKYNIDKIRELIANGADNHPGVNYLIKKVK 386
Query: 351 TDDGNKRFLRYGNRKKV----AKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAK 518
T DG + + KV ++ + G +VERHL+DGD+VL+NRQPSLHR+SIM+H K
Sbjct: 387 TRDGKEEEYKIKITDKVKELWSEKVEEGMIVERHLIDGDIVLYNRQPSLHRMSIMAHRVK 446
Query: 519 VVPHRTFRFNECVC 560
V+P+RTFR N CVC
Sbjct: 447 VLPYRTFRHNLCVC 460
[202][TOP]
>UniRef100_A8Q5I6 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
RepID=A8Q5I6_MALGO
Length = 1607
Score = 189 bits (479), Expect = 2e-46
Identities = 97/177 (54%), Positives = 123/177 (69%), Gaps = 1/177 (0%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ A +M++D LP L S+ +P++ I RLKGK GR RGNL GKRVDFS RTVI+
Sbjct: 103 LQYHTATYMDNDIAGLPQSLQSSGRPVKAIRARLKGKEGRLRGNLMGKRVDFSARTVITG 162
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPNL +DQVG+P +AR LTYPERVT +NR L+ V GP+ YPGA +V D G + L
Sbjct: 163 DPNLELDQVGVPKSIARNLTYPERVTPYNRAYLSDLVRNGPNEYPGARYVIRDTGERIDL 222
Query: 378 RYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
+Y R +A L G +VERHL DGD VLFNRQPSLH++S+M+H K++ + TFR N
Sbjct: 223 KYNRRGDIA--LQAGWIVERHLRDGDYVLFNRQPSLHKMSMMAHRVKLMDYSTFRLN 277
[203][TOP]
>UniRef100_Q22M85 DNA-directed RNA polymerase n=1 Tax=Tetrahymena thermophila SB210
RepID=Q22M85_TETTH
Length = 1418
Score = 188 bits (478), Expect = 2e-46
Identities = 95/188 (50%), Positives = 128/188 (68%), Gaps = 4/188 (2%)
Frame = +3
Query: 12 WEWLQVEAARFMNSDATNLPPLAST---AKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
W LQ A ++N++ NLP K +R ++QRLKGK GRFRGNLSGKR +F+GR
Sbjct: 258 WFLLQCSHAHYLNAETPNLPFKMDKDFGKKDIRALAQRLKGKKGRFRGNLSGKRSNFTGR 317
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPN+ +D V +P +A+ LT+PE+V N +RL VI GP+ YPGA+++ D
Sbjct: 318 TVISPDPNIPIDNVVVPEYMAKILTFPEQVNAINIERLKKLVINGPEKYPGAHYIIAKDT 377
Query: 363 NKRF-LRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTF 539
+F L NR+K A +L +G +VERH+ +G+++LFNRQPSLHRISIM+ A + T
Sbjct: 378 EDKFNLSIDNRRKKADELKIGDIVERHIQNGEILLFNRQPSLHRISIMAFKANIQKWNTI 437
Query: 540 RFNECVCA 563
RFNEC CA
Sbjct: 438 RFNECCCA 445
[204][TOP]
>UniRef100_P41556 DNA-directed RNA polymerase subunit A' n=1 Tax=Methanococcus
vannielii SB RepID=RPOA1_METVS
Length = 889
Score = 188 bits (478), Expect = 2e-46
Identities = 97/194 (50%), Positives = 133/194 (68%), Gaps = 9/194 (4%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W+ LQ + +++A +PP + +PLR ++QRLKGK GRFR NL+GKRV+FS R
Sbjct: 267 DLWDLLQYHINTYFDNEAPGIPPARHRSGRPLRTLAQRLKGKEGRFRHNLAGKRVNFSAR 326
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF----VE 350
TVISPDP L +++VGIP +A+ LT PE+VT +N +R+ + G D +PG N+ V+
Sbjct: 327 TVISPDPRLSINEVGIPELIAKELTVPEKVTPYNIERIRKLIENGSDKHPGVNYVIKKVK 386
Query: 351 TDDGNKRFLRY----GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAK 518
T DG + + N+K +++ G VVERHL DGDVVL+NRQPSLHR+SIM+H K
Sbjct: 387 TKDGKEEEYKIKITDTNKKMWVENIVDGMVVERHLGDGDVVLYNRQPSLHRMSIMAHKVK 446
Query: 519 VVPHRTFRFNECVC 560
V+P+RTFR N CVC
Sbjct: 447 VLPYRTFRHNLCVC 460
[205][TOP]
>UniRef100_O04142 DNA-directed RNA polymerase (Fragment) n=1 Tax=Porphyra yezoensis
RepID=O04142_PORYE
Length = 1685
Score = 188 bits (477), Expect = 3e-46
Identities = 93/177 (52%), Positives = 122/177 (68%), Gaps = 1/177 (0%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ A +MN+D +P A + +PL+ ISQRLKGK GR RGNL GKRVDFS RTVI+P
Sbjct: 222 LQFHVATYMNNDLPGMPRAAQKSGRPLKSISQRLKGKEGRLRGNLMGKRVDFSARTVITP 281
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPNLR+DQVG+P +A+ LT+PE VT +N + + V GPD YP A +++ DDG + L
Sbjct: 282 DPNLRLDQVGVPFSIAKNLTFPETVTAYNIEEMQQLVENGPDEYPDAKYIQRDDGYQVNL 341
Query: 378 RYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
Y R + L +G V RH+ +GD ++FNRQPSLH++SIM H KV+P+ TFR N
Sbjct: 342 AY-VRNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLN 397
[206][TOP]
>UniRef100_Q18EX6 DNA-directed RNA polymerase n=1 Tax=Haloquadratum walsbyi DSM 16790
RepID=Q18EX6_HALWD
Length = 978
Score = 188 bits (477), Expect = 3e-46
Identities = 93/186 (50%), Positives = 128/186 (68%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D WE LQ F++++ + PP + +PL+ +SQRLKGK GRFRG+LSGKRV+FS R
Sbjct: 336 DLWELLQYHVTTFIDNEISGTPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSAR 395
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDP L +++VG+P RVAR +T VT N R V GP+ +PGAN+V+ DG
Sbjct: 396 TVISPDPTLSLNEVGVPERVAREMTQTMNVTARNVDRAQQYVRNGPEGHPGANYVKRPDG 455
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+ + N +++A+ + G V RHL+DGD+V+FNRQPSLHR+SIM+H V+P++TFR
Sbjct: 456 RRLKVTEKNCEELAEKIDAGWEVNRHLIDGDIVIFNRQPSLHRMSIMAHEVVVMPYKTFR 515
Query: 543 FNECVC 560
N VC
Sbjct: 516 LNTVVC 521
[207][TOP]
>UniRef100_C1V769 DNA-directed RNA polymerase n=1 Tax=Halogeometricum borinquense DSM
11551 RepID=C1V769_9EURY
Length = 978
Score = 188 bits (477), Expect = 3e-46
Identities = 92/186 (49%), Positives = 130/186 (69%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D WE LQ F++++ + PP + +PL+ +SQRLKGK GRFRG+LSGKRV+FS R
Sbjct: 336 DLWELLQYHVTTFIDNEISGTPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSAR 395
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDP L +++VG+P RVAR +T VT+ N ++ V GP+ +PGAN+V+ DG
Sbjct: 396 TVISPDPTLSLNEVGVPERVAREMTQTMNVTERNLEQAQQYVRNGPEGHPGANYVKRPDG 455
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+ + N +++A+ + G V RHL+DGD+V+FNRQPSLHR+SIM+H V+P++TFR
Sbjct: 456 RRLKVTEKNCEELAEKVQAGWEVNRHLIDGDIVIFNRQPSLHRMSIMAHEVVVMPYKTFR 515
Query: 543 FNECVC 560
N VC
Sbjct: 516 LNTVVC 521
[208][TOP]
>UniRef100_B3T842 DNA-directed RNA polymerase (Fragment) n=1 Tax=uncultured marine
crenarchaeote HF4000_APKG4H17 RepID=B3T842_9ARCH
Length = 993
Score = 187 bits (476), Expect = 4e-46
Identities = 95/182 (52%), Positives = 130/182 (71%), Gaps = 2/182 (1%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ + +++ + +P + +PL+ ++QRLKGK GRFRG+LSGKRVDFS RTVISP
Sbjct: 1 LQYHTTTYFDNEVSGIPQAHHRSGRPLKTLTQRLKGKEGRFRGSLSGKRVDFSSRTVISP 60
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPNL + +VG+P++VA LT PE VT+ N ++L VI GPDT+PG N++ DG K L
Sbjct: 61 DPNLDLGEVGVPVQVATKLTIPEIVTEWNIEKLKKLVINGPDTFPGVNYIVRPDGVKIRL 120
Query: 378 RY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFNEC 554
+ +R +A L +G +VERHL DGDVVLFNRQPSLH++SIM+H +V+P +TFR +
Sbjct: 121 DFVEDRSIIADSLEIGYLVERHLSDGDVVLFNRQPSLHQMSIMAHHVRVLPGKTFRLHPS 180
Query: 555 VC 560
VC
Sbjct: 181 VC 182
[209][TOP]
>UniRef100_Q6LXI8 DNA-directed RNA polymerase n=1 Tax=Methanococcus maripaludis
RepID=Q6LXI8_METMP
Length = 889
Score = 187 bits (474), Expect = 6e-46
Identities = 94/194 (48%), Positives = 132/194 (68%), Gaps = 9/194 (4%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W+ LQ + +++A +PP + +PLR ++QRLKGK GRFR NL+GKRV+FS R
Sbjct: 267 DLWDLLQYHINTYFDNEAPGIPPARHRSGRPLRTLAQRLKGKEGRFRHNLAGKRVNFSAR 326
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF----VE 350
TVISPDP L +++VGIP +A+ LT PE+VT +N +++ A + G D +PG N+ V
Sbjct: 327 TVISPDPRLSINEVGIPKLIAKELTVPEKVTPYNIEKVRALLRNGSDNHPGVNYVVKKVR 386
Query: 351 TDDGNKRFLRY----GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAK 518
T DG + + N+ +++ G V+ERHL DGD+VL+NRQPSLHR+SIM+H K
Sbjct: 387 TKDGKEEEYKIKITDANKDMWVENITDGMVIERHLSDGDIVLYNRQPSLHRMSIMAHKVK 446
Query: 519 VVPHRTFRFNECVC 560
V+P+RTFR N CVC
Sbjct: 447 VLPYRTFRHNLCVC 460
[210][TOP]
>UniRef100_A5ULN6 DNA-directed RNA polymerase n=1 Tax=Methanobrevibacter smithii ATCC
35061 RepID=A5ULN6_METS3
Length = 894
Score = 187 bits (474), Expect = 6e-46
Identities = 88/186 (47%), Positives = 127/186 (68%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D WE LQ + +++A+ +PP + +PL+ ++QRLKGK GRFR NLSGKRV+FS R
Sbjct: 264 DLWELLQYHVTTYFDNEASGVPPARHRSGRPLKTLAQRLKGKEGRFRSNLSGKRVNFSAR 323
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPN+ +++VG+P +A+ +T P V N + + GP+ +PGAN+V DG
Sbjct: 324 TVISPDPNISINEVGVPEMIAKEVTVPAYVNDWNMDEMRTYIENGPNVHPGANYVIRTDG 383
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K + + + + L G ++ERHL DGD+VLFNRQPSLHR+S+M+H +V+P++TFR
Sbjct: 384 RKIRVYDETKDMILEKLEPGYIIERHLKDGDMVLFNRQPSLHRMSMMAHEVRVLPYKTFR 443
Query: 543 FNECVC 560
N CVC
Sbjct: 444 LNLCVC 449
[211][TOP]
>UniRef100_B9AEP6 DNA-directed RNA polymerase n=1 Tax=Methanobrevibacter smithii DSM
2375 RepID=B9AEP6_METSM
Length = 894
Score = 187 bits (474), Expect = 6e-46
Identities = 88/186 (47%), Positives = 127/186 (68%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D WE LQ + +++A+ +PP + +PL+ ++QRLKGK GRFR NLSGKRV+FS R
Sbjct: 264 DLWELLQYHVTTYFDNEASGVPPARHRSGRPLKTLAQRLKGKEGRFRSNLSGKRVNFSAR 323
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDPN+ +++VG+P +A+ +T P V N + + GP+ +PGAN+V DG
Sbjct: 324 TVISPDPNISINEVGVPEMIAKEVTVPAYVNDWNMDEMRTYIENGPNVHPGANYVIRTDG 383
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
K + + + + L G ++ERHL DGD+VLFNRQPSLHR+S+M+H +V+P++TFR
Sbjct: 384 RKIRVYDETKDMILEKLEPGYIIERHLKDGDMVLFNRQPSLHRMSMMAHEVRVLPYKTFR 443
Query: 543 FNECVC 560
N CVC
Sbjct: 444 LNLCVC 449
[212][TOP]
>UniRef100_B5IH61 DNA-directed RNA polymerase (Fragment) n=1 Tax=Aciduliprofundum
boonei T469 RepID=B5IH61_9EURY
Length = 661
Score = 187 bits (474), Expect = 6e-46
Identities = 99/191 (51%), Positives = 130/191 (68%), Gaps = 6/191 (3%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D WE LQ + ++ + +PP + +PL+ + QRLKGK GRFR NLSGKRV+FS R
Sbjct: 211 DLWELLQYHVTTYFDNQTSGIPPARHRSGRPLKTLVQRLKGKEGRFRSNLSGKRVNFSAR 270
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGP----DTY-PGANFV 347
TVISP+P L +++VG+P AR LT P VT++N +++ V RG D Y PGAN+V
Sbjct: 271 TVISPEPFLSINEVGVPEAAARELTVPITVTEYNIEKMKEIVRRGSNPKGDKYLPGANYV 330
Query: 348 ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVP 527
DG + + N + V+K L +G VVERHL+DGDVVLFNRQPSLHR+S+M H KV+P
Sbjct: 331 IRPDGRRIKITDRNAEDVSKKLDIGWVVERHLIDGDVVLFNRQPSLHRMSMMGHLVKVMP 390
Query: 528 HRTFRFNECVC 560
+RTFRFN VC
Sbjct: 391 NRTFRFNLAVC 401
[213][TOP]
>UniRef100_B5IGJ6 DNA-directed RNA polymerase n=1 Tax=Aciduliprofundum boonei T469
RepID=B5IGJ6_9EURY
Length = 895
Score = 187 bits (474), Expect = 6e-46
Identities = 99/191 (51%), Positives = 130/191 (68%), Gaps = 6/191 (3%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D WE LQ + ++ + +PP + +PL+ + QRLKGK GRFR NLSGKRV+FS R
Sbjct: 268 DLWELLQYHVTTYFDNQTSGIPPARHRSGRPLKTLVQRLKGKEGRFRSNLSGKRVNFSAR 327
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGP----DTY-PGANFV 347
TVISP+P L +++VG+P AR LT P VT++N +++ V RG D Y PGAN+V
Sbjct: 328 TVISPEPFLSINEVGVPEAAARELTVPITVTEYNIEKMKEIVRRGSNPKGDKYLPGANYV 387
Query: 348 ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVP 527
DG + + N + V+K L +G VVERHL+DGDVVLFNRQPSLHR+S+M H KV+P
Sbjct: 388 IRPDGRRIKITDRNAEDVSKKLDIGWVVERHLIDGDVVLFNRQPSLHRMSMMGHLVKVMP 447
Query: 528 HRTFRFNECVC 560
+RTFRFN VC
Sbjct: 448 NRTFRFNLAVC 458
[214][TOP]
>UniRef100_A8MAA2 DNA-directed RNA polymerase n=1 Tax=Caldivirga maquilingensis
IC-167 RepID=A8MAA2_CALMQ
Length = 889
Score = 186 bits (472), Expect = 1e-45
Identities = 94/188 (50%), Positives = 134/188 (71%), Gaps = 2/188 (1%)
Frame = +3
Query: 3 MDGWEWLQVEAARFMNSDATN-LPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSG 179
+D W+ LQ A +++++ + + +PL+GI+QRLKGK GRFRG+LSGKRV+FS
Sbjct: 276 LDLWDSLQANVATYIDNELPGGIQARHRSKRPLKGIAQRLKGKEGRFRGSLSGKRVEFSA 335
Query: 180 RTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDD 359
RTVISPDPNL +++VG+P+ +A+ LT E VT+ N + V+ GP+T+PGAN V T D
Sbjct: 336 RTVISPDPNLSINEVGVPIDIAKELTVVEPVTEWNIDLMRMLVVNGPETWPGANRVITPD 395
Query: 360 GNKRFLRY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRT 536
G K L+ +R ++A+ + G ++ERHL+DGD VLFNRQPSLH++S+M H KV+P RT
Sbjct: 396 GKKIELKVRRDRSELAQQIQPGWMIERHLMDGDYVLFNRQPSLHKMSMMCHIVKVLPGRT 455
Query: 537 FRFNECVC 560
FR + VC
Sbjct: 456 FRLHLAVC 463
[215][TOP]
>UniRef100_Q2PYR6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coemansia reversa
RepID=Q2PYR6_9FUNG
Length = 1013
Score = 186 bits (471), Expect = 1e-45
Identities = 94/177 (53%), Positives = 124/177 (70%), Gaps = 1/177 (0%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ A FMN++A+ +P L + +P++ I RLKGK GR RGNL GKRVDFS RTVI+
Sbjct: 228 LQFHTAAFMNNEASGMPQALQKSGRPIKSIRARLKGKEGRLRGNLMGKRVDFSARTVITG 287
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPN+ +DQVG+P +AR LTYPE VT +N RL V G D YPGA FV D+G + L
Sbjct: 288 DPNISIDQVGVPRSIARNLTYPETVTPYNIDRLQEYVRNGRDAYPGAKFVVRDNGEQINL 347
Query: 378 RYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
+Y N+++ L +G VER+L+D DV++FNRQPSLH++S+M H KV+P+ TFR N
Sbjct: 348 QY-NKQRGDFPLQIGYRVERNLIDDDVIIFNRQPSLHKMSMMGHRVKVMPYSTFRLN 403
[216][TOP]
>UniRef100_Q5UZR4 DNA-directed RNA polymerase n=1 Tax=Haloarcula marismortui
RepID=Q5UZR4_HALMA
Length = 969
Score = 186 bits (471), Expect = 1e-45
Identities = 91/186 (48%), Positives = 128/186 (68%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D WE LQ FM+++ + PP + +PL+ +SQRLKGK GRFRG+LSGKRV+FS R
Sbjct: 332 DLWELLQYHVTTFMDNEISGTPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSAR 391
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDP L +++VG+P RVA+ +T VT+ N + V GP+ +PGAN+V+ DG
Sbjct: 392 TVISPDPTLSLNEVGVPDRVAKEMTQTMNVTERNLEEARRYVSNGPEAHPGANYVKRPDG 451
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+ + N +++A+ + V RHLVDGD+++FNRQPSLHR+SIM+H V+P++TFR
Sbjct: 452 RRLKVTEKNCEELAEKVEAEWEVSRHLVDGDIIIFNRQPSLHRMSIMAHEVVVMPYKTFR 511
Query: 543 FNECVC 560
N VC
Sbjct: 512 LNTTVC 517
[217][TOP]
>UniRef100_A4FWF6 DNA-directed RNA polymerase n=1 Tax=Methanococcus maripaludis C5
RepID=A4FWF6_METM5
Length = 889
Score = 186 bits (471), Expect = 1e-45
Identities = 94/194 (48%), Positives = 132/194 (68%), Gaps = 9/194 (4%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W+ LQ + +++A +PP + +PLR ++QRLKGK GRFR NL+GKRV+FS R
Sbjct: 267 DLWDLLQYHINTYFDNEAPGIPPARHRSGRPLRTLAQRLKGKEGRFRHNLAGKRVNFSAR 326
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANF----VE 350
TVISPDP L +++VGIP +A+ LT PE+VT +N +++ + G DT+PG N+ V
Sbjct: 327 TVISPDPRLSINEVGIPKLIAKELTVPEKVTPYNIEKVRTLLRNGADTHPGVNYVVKKVR 386
Query: 351 TDDGNKRFLRY----GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAK 518
T DG + + N+ +++ G VVERHL +GD+VL+NRQPSLHR+SIM+H K
Sbjct: 387 TKDGKEEEYKIKITDANKDMWVENITDGMVVERHLSNGDIVLYNRQPSLHRMSIMAHKVK 446
Query: 519 VVPHRTFRFNECVC 560
V+P+RTFR N CVC
Sbjct: 447 VLPYRTFRHNLCVC 460
[218][TOP]
>UniRef100_Q2PYS8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rozella allomycis
RepID=Q2PYS8_9FUNG
Length = 809
Score = 185 bits (470), Expect = 2e-45
Identities = 97/177 (54%), Positives = 121/177 (68%), Gaps = 1/177 (0%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ A +M + LP + + +PL+ IS RLKGK GR RGNL GKRVDFS RTVI+P
Sbjct: 30 LQFHVATYMENSIPGLPKAIQKSGRPLKSISARLKGKEGRLRGNLMGKRVDFSARTVITP 89
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPNL +DQVG+P +A+TLTYPE VT +N + L V GP +PGA +V DDGN+ L
Sbjct: 90 DPNLSLDQVGVPRTIAKTLTYPEIVTPYNIEYLQKLVNNGPTEHPGARYVVRDDGNRIDL 149
Query: 378 RYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
R+ K L G +VERH+ DGDVVLFNRQPSLH++S+M H KV+P+ TFR N
Sbjct: 150 RF----KTDVVLQPGYLVERHINDGDVVLFNRQPSLHKMSMMGHRIKVMPYSTFRLN 202
[219][TOP]
>UniRef100_C4Y5N4 DNA-directed RNA polymerase n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4Y5N4_CLAL4
Length = 1402
Score = 185 bits (470), Expect = 2e-45
Identities = 100/179 (55%), Positives = 123/179 (68%), Gaps = 3/179 (1%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ A +M++D P L T +P++ I RLKGK GR RGNL GKRVDFS RTVIS
Sbjct: 255 LQFHVATYMDNDIAGQPQALQKTGRPIKSIRARLKGKEGRLRGNLMGKRVDFSARTVISG 314
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPNL +DQVG+PL +ARTLTYPE VT +N RL V GP+ +PGA +V D G++ L
Sbjct: 315 DPNLDLDQVGVPLSIARTLTYPEIVTPYNIHRLTEYVRNGPNEHPGAKYVIRDTGDRIDL 374
Query: 378 RYGNRKKVAKDLPL--GAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
RY R A D+ L G VERHL+D D VLFNRQPSLH++S+M+H KV+P+ TFR N
Sbjct: 375 RYNKR---AGDIALQYGWKVERHLMDDDPVLFNRQPSLHKMSMMAHRVKVMPYSTFRLN 430
[220][TOP]
>UniRef100_B9Z9B0 DNA-directed RNA polymerase n=1 Tax=Natrialba magadii ATCC 43099
RepID=B9Z9B0_NATMA
Length = 976
Score = 185 bits (470), Expect = 2e-45
Identities = 92/186 (49%), Positives = 126/186 (67%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D WE LQ FM+++ + PP + +PL+ +SQRLKGK GRFRG+LSGKRV+FS R
Sbjct: 335 DLWELLQYHVTTFMDNEISGTPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSAR 394
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDP L +++VG+P RVA+ +T VT N + V GP+ +PGAN+V DG
Sbjct: 395 TVISPDPTLSLNEVGVPDRVAKEMTQTMNVTDRNVEEARRYVSNGPEGHPGANYVRRPDG 454
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+ + N + +A+ + G V RH+VDGD+V+FNRQPSLHR+SIM+H V+P++TFR
Sbjct: 455 RRLKVTEKNCEALAEKVDAGWEVNRHMVDGDIVIFNRQPSLHRMSIMAHEVVVMPYKTFR 514
Query: 543 FNECVC 560
N VC
Sbjct: 515 LNTVVC 520
[221][TOP]
>UniRef100_C4QF52 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni
RepID=C4QF52_SCHMA
Length = 1342
Score = 185 bits (469), Expect = 2e-45
Identities = 103/196 (52%), Positives = 125/196 (63%), Gaps = 16/196 (8%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPPLASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISPD 200
L E AR +NS + LPP+ K +RG+ QRL GK GRFRG+L GKR +F+ RTVISPD
Sbjct: 309 LHAEFARLINSQQSGLPPVQDH-KFMRGLLQRLAGKHGRFRGSLLGKRTNFTARTVISPD 367
Query: 201 PNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVE---------- 350
PN+R+D+V IP+ A+ LTYPERVT N L + V+ GP+ YPGA FV
Sbjct: 368 PNMRIDEVCIPVHCAKLLTYPERVTDFNLNFLRSLVLNGPNNYPGAMFVSYKLRGERKRQ 427
Query: 351 -----TDDGNKRFLRYGN-RKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHS 512
D KRFL R+ VAK L G +VERHL+D D+VLFNRQPSLHR+SI +
Sbjct: 428 AEASGNSDVVKRFLASERAREDVAKYLQSGDIVERHLLDDDIVLFNRQPSLHRVSIQAFR 487
Query: 513 AKVVPHRTFRFNECVC 560
A V P RTFRFN C C
Sbjct: 488 AVVKPFRTFRFNPCCC 503
[222][TOP]
>UniRef100_A0RXW9 DNA-directed RNA polymerase n=1 Tax=Cenarchaeum symbiosum
RepID=A0RXW9_CENSY
Length = 1260
Score = 185 bits (469), Expect = 2e-45
Identities = 92/182 (50%), Positives = 128/182 (70%), Gaps = 2/182 (1%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ A + +++ + +P + +PL+ ++QRLKGK GRFRG+LSGKRVDFS RTVISP
Sbjct: 272 LQYHATTYFDNEISGIPQAHHRSGRPLKTLTQRLKGKEGRFRGSLSGKRVDFSSRTVISP 331
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPNL + +VG+P VA LT PE VT+ N R+ V+ GPD YPG N++ DG K L
Sbjct: 332 DPNLDLSEVGVPESVAMKLTIPEIVTEWNIARMKELVVNGPDHYPGVNYIVRPDGVKIRL 391
Query: 378 RY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFNEC 554
+ +R +A L +G ++ERHL+DGD+V+FNRQPSLH++SIM+H +V+P +TFR +
Sbjct: 392 DFVEDRSTIADTLEMGYLIERHLLDGDIVMFNRQPSLHQMSIMAHHVRVLPGKTFRLHPS 451
Query: 555 VC 560
VC
Sbjct: 452 VC 453
[223][TOP]
>UniRef100_Q5S1Y0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Boletellus
projectellus RepID=Q5S1Y0_9HOMO
Length = 997
Score = 184 bits (468), Expect = 3e-45
Identities = 95/177 (53%), Positives = 119/177 (67%), Gaps = 1/177 (0%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ A +M++D +P L + +P++ I RLKGK GR RGNL GKRVDFS RTVI+
Sbjct: 212 LQFHVATYMDNDIAGIPQALQKSGRPVKAIRARLKGKEGRLRGNLMGKRVDFSARTVITG 271
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPNL +D+VG+P +A LTYPERVT +N L V GP TYPGA +V D G + L
Sbjct: 272 DPNLELDEVGVPRSIAMNLTYPERVTPYNIAYLQELVRNGPSTYPGARYVVRDTGERIDL 331
Query: 378 RYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
RY K+ L G +VERHL DGD VLFNRQPSLH++S+MSH K++P+ TFR N
Sbjct: 332 RY--NKRADAFLQYGWIVERHLKDGDFVLFNRQPSLHKMSMMSHRVKLMPYSTFRLN 386
[224][TOP]
>UniRef100_C7NYI6 DNA-directed RNA polymerase subunit A' n=1 Tax=Halomicrobium
mukohataei DSM 12286 RepID=C7NYI6_HALMD
Length = 972
Score = 184 bits (468), Expect = 3e-45
Identities = 89/186 (47%), Positives = 127/186 (68%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D WE LQ FM+++ + PP + +PL+ +SQRLKGK GRFRG+LSGKRV+FS R
Sbjct: 336 DLWELLQYHVTTFMDNEISGTPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSAR 395
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDP L +++VG+P RVA+ +T V + N V GP+ +PGAN+V+ DG
Sbjct: 396 TVISPDPTLSLNEVGVPDRVAKEMTQTMNVNERNLDNARRYVANGPEAHPGANYVKRPDG 455
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+ + N +++A+ + G V RH++DGD+++FNRQPSLHR+SIM+H V+P++TFR
Sbjct: 456 RRLKVTEKNCEELAEKVEPGWEVSRHMIDGDIIIFNRQPSLHRMSIMAHEVVVMPYKTFR 515
Query: 543 FNECVC 560
N VC
Sbjct: 516 LNTTVC 521
[225][TOP]
>UniRef100_UPI0001B119CD RNA polymerase alpha subunit n=1 Tax=Methanocaldococcus vulcanius
M7 RepID=UPI0001B119CD
Length = 1234
Score = 184 bits (467), Expect = 4e-45
Identities = 93/194 (47%), Positives = 134/194 (69%), Gaps = 9/194 (4%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W LQ + +++A +PP + +PL+ ++QRLKGK GRFR NL+GKRV+FS R
Sbjct: 160 DLWNLLQYHINTYFDNEAPGIPPAKHRSGRPLKTLAQRLKGKEGRFRYNLAGKRVNFSSR 219
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFV----- 347
TVISPDP L V++VG+P +A+ LT PE+VTK+N +R+ + G + +PG N+V
Sbjct: 220 TVISPDPCLSVNEVGVPEIIAKELTVPEKVTKYNIERIRKLLRNGSEKHPGVNYVIRKMI 279
Query: 348 ---ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAK 518
T+ K + GN++ A+++ G +VERHL+DGD+VL+NRQPSLHR+SIM+H +
Sbjct: 280 GRDGTEQEYKVKVTEGNKEFWAENIKEGDIVERHLMDGDIVLYNRQPSLHRMSIMAHRVR 339
Query: 519 VVPHRTFRFNECVC 560
V+P+RTFR N CVC
Sbjct: 340 VLPYRTFRHNLCVC 353
[226][TOP]
>UniRef100_C9RDK8 DNA-directed RNA polymerase subunit A' n=1 Tax=Methanocaldococcus
vulcanius M7 RepID=C9RDK8_9EURY
Length = 1343
Score = 184 bits (467), Expect = 4e-45
Identities = 93/194 (47%), Positives = 134/194 (69%), Gaps = 9/194 (4%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W LQ + +++A +PP + +PL+ ++QRLKGK GRFR NL+GKRV+FS R
Sbjct: 269 DLWNLLQYHINTYFDNEAPGIPPAKHRSGRPLKTLAQRLKGKEGRFRYNLAGKRVNFSSR 328
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFV----- 347
TVISPDP L V++VG+P +A+ LT PE+VTK+N +R+ + G + +PG N+V
Sbjct: 329 TVISPDPCLSVNEVGVPEIIAKELTVPEKVTKYNIERIRKLLRNGSEKHPGVNYVIRKMI 388
Query: 348 ---ETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAK 518
T+ K + GN++ A+++ G +VERHL+DGD+VL+NRQPSLHR+SIM+H +
Sbjct: 389 GRDGTEQEYKVKVTEGNKEFWAENIKEGDIVERHLMDGDIVLYNRQPSLHRMSIMAHRVR 448
Query: 519 VVPHRTFRFNECVC 560
V+P+RTFR N CVC
Sbjct: 449 VLPYRTFRHNLCVC 462
[227][TOP]
>UniRef100_B3A009 DNA-directed RNA polymerase n=1 Tax=Haloarcula japonica
RepID=B3A009_HALJP
Length = 969
Score = 184 bits (467), Expect = 4e-45
Identities = 91/186 (48%), Positives = 127/186 (68%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D WE LQ FM+++ + PP + +PL+ +SQRLKGK GRFRG+LSGKRV+FS R
Sbjct: 332 DLWELLQYHVTTFMDNEISGTPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSAR 391
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDP L +++VG+P RVA+ +T VT N + V GP+ +PGAN+V+ DG
Sbjct: 392 TVISPDPTLSLNEVGVPDRVAKEMTQTMNVTDRNLEEARRYVSNGPEAHPGANYVKRPDG 451
Query: 363 NKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFR 542
+ + N +++A+ + V RHLVDGD+++FNRQPSLHR+SIM+H V+P++TFR
Sbjct: 452 RRLKVTEKNCEELAEKVEPEWEVSRHLVDGDIIIFNRQPSLHRMSIMAHEVVVMPYKTFR 511
Query: 543 FNECVC 560
N VC
Sbjct: 512 LNTTVC 517
[228][TOP]
>UniRef100_A8X1M6 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae
RepID=A8X1M6_CAEBR
Length = 1435
Score = 184 bits (466), Expect = 5e-45
Identities = 88/135 (65%), Positives = 108/135 (80%), Gaps = 1/135 (0%)
Frame = +3
Query: 159 KRVDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGA 338
KRVDFSGRTVISPDPNLR+DQVG+P+ VA TLT+PE V N ++ ++ G D +PGA
Sbjct: 372 KRVDFSGRTVISPDPNLRIDQVGVPVHVAMTLTFPEIVNASNIDKMRKLIVNGSDVHPGA 431
Query: 339 NF-VETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSA 515
N+ V+ G+K+ L+YGNR+++AK+L LG VERHL D DVVLFNRQPSLH+ISIMSH A
Sbjct: 432 NYLVDKKTGHKKLLKYGNREELAKNLRLGDTVERHLDDNDVVLFNRQPSLHKISIMSHRA 491
Query: 516 KVVPHRTFRFNECVC 560
KV+P RTFRFNEC C
Sbjct: 492 KVMPGRTFRFNECAC 506
[229][TOP]
>UniRef100_Q6FQS9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
RepID=Q6FQS9_CANGA
Length = 1715
Score = 184 bits (466), Expect = 5e-45
Identities = 96/177 (54%), Positives = 122/177 (68%), Gaps = 1/177 (0%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ A +M++D P L + +P++ I RLKGK GR RGNL GKRVDFS RTVIS
Sbjct: 296 LQFHVATYMDNDIAGQPQALQKSGRPVKSIRARLKGKEGRIRGNLMGKRVDFSARTVISG 355
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPNL +DQVG+P +ARTLTYPE VT +N RL+ V GP+ +PGA +V D+G++ L
Sbjct: 356 DPNLELDQVGVPKSIARTLTYPEVVTPYNIDRLSQLVRNGPNEHPGAKYVIRDNGDRIDL 415
Query: 378 RYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
RY R + L G VERH++D D VLFNRQPSLH++S+M+H KVVP+ TFR N
Sbjct: 416 RYSKRSGDVQ-LQYGWKVERHIMDDDPVLFNRQPSLHKMSMMAHRVKVVPYSTFRLN 471
[230][TOP]
>UniRef100_Q2PYR5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mortierella
verticillata RepID=Q2PYR5_9FUNG
Length = 1016
Score = 184 bits (466), Expect = 5e-45
Identities = 95/177 (53%), Positives = 120/177 (67%), Gaps = 1/177 (0%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPPLA-STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ A +M++D PP A +PL+ I RLKGK GR RGNL GKRVDFS RTVI+
Sbjct: 225 LQYHVATYMDNDIAGQPPAAHKNGRPLKSIRARLKGKEGRLRGNLMGKRVDFSARTVITG 284
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPNL +D+VG+P +ARTLTYPE VT +N +L V GP +PGA +V DDG + L
Sbjct: 285 DPNLSIDEVGVPRSIARTLTYPELVTPYNIDKLQKLVRNGPTEHPGAVYVIRDDGQRIDL 344
Query: 378 RYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
R+ R+ L LG VERH+ DGDVV+FNRQPSLH++S+M H +V+P+ TFR N
Sbjct: 345 RWNKRE---VPLQLGWKVERHINDGDVVIFNRQPSLHKMSMMGHKIRVMPYSTFRLN 398
[231][TOP]
>UniRef100_Q2PYR4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhopalomyces elegans
RepID=Q2PYR4_9FUNG
Length = 792
Score = 184 bits (466), Expect = 5e-45
Identities = 94/179 (52%), Positives = 123/179 (68%), Gaps = 3/179 (1%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ A +M++D P L + +PL+ I RLKGK GR RGNL GKRVDFS RTVI+
Sbjct: 227 LQFHVATYMDNDIAGQPQALQKSGRPLKSIRARLKGKEGRLRGNLMGKRVDFSARTVITG 286
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPNL +D+VG+PL +A+ LT+PE VT +N +L V GP+ +PGA +V D+G + L
Sbjct: 287 DPNLSIDEVGVPLLIAKNLTFPEIVTPYNVGKLQELVANGPNAHPGARYVYRDNGERIDL 346
Query: 378 RYGNRKKVAKDLPL--GAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
R+ R D+PL G VERHLVDGD+V+FNRQPSLH++S+M H +V+PH TFR N
Sbjct: 347 RFNRR---GGDIPLQYGWRVERHLVDGDLVIFNRQPSLHKMSMMGHRVRVMPHHTFRLN 402
[232][TOP]
>UniRef100_Q2PYR3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhizophlyctis rosea
RepID=Q2PYR3_9FUNG
Length = 1006
Score = 184 bits (466), Expect = 5e-45
Identities = 94/177 (53%), Positives = 121/177 (68%), Gaps = 1/177 (0%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPPLA-STAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ A FM++D A + +PL+ I RLKGK GR RGNL GKRVDFS RTVI+
Sbjct: 222 LQYHVATFMDNDGAGANAAAHKSGRPLKTIRSRLKGKEGRLRGNLMGKRVDFSARTVITG 281
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPNL +DQVG+P +AR LT+PE VTK N ++LAAAV GP +PGA +V +G++ L
Sbjct: 282 DPNLSIDQVGVPRSIARNLTFPEVVTKCNFEKLAAAVANGPTAHPGAKYVINSNGDRTDL 341
Query: 378 RYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
RY V L +G VERHL+D D+++FNRQPSLH++S+M H KV+P+ TFR N
Sbjct: 342 RYAREDSVI--LKIGDKVERHLMDDDLIIFNRQPSLHKMSMMGHRVKVMPYSTFRLN 396
[233][TOP]
>UniRef100_Q0PNI5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cantharellus
cibarius RepID=Q0PNI5_CANCI
Length = 417
Score = 184 bits (466), Expect = 5e-45
Identities = 94/177 (53%), Positives = 121/177 (68%), Gaps = 1/177 (0%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ A +M++D +P + + +P++ I RLKGK GR RGNL GKRVDFS RTVI+
Sbjct: 227 LQFHVATYMDNDIAGIPQAMQKSGRPVKAIRSRLKGKEGRLRGNLMGKRVDFSSRTVITG 286
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPN+ +D+VG+P VA TLTYPERVT +N ++L V GP YPGA +V D G + L
Sbjct: 287 DPNIMLDEVGVPKSVAMTLTYPERVTPYNIEQLQELVRNGPREYPGARYVVRDTGERIDL 346
Query: 378 RYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
RY K+ L G +VERHL DGD VLFNRQPSLH++S+MSH K++P+ TFR N
Sbjct: 347 RY--NKRTDAFLQYGWIVERHLRDGDYVLFNRQPSLHKMSMMSHRVKLMPYSTFRLN 401
[234][TOP]
>UniRef100_B3T8B1 DNA-directed RNA polymerase n=1 Tax=uncultured marine crenarchaeote
HF4000_APKG5C13 RepID=B3T8B1_9ARCH
Length = 1268
Score = 184 bits (466), Expect = 5e-45
Identities = 93/182 (51%), Positives = 129/182 (70%), Gaps = 2/182 (1%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ + +++ + +P + +PL+ ++QRLKGK GRFRG+LSGKRVDFS RTVISP
Sbjct: 272 LQYHCTTYFDNEVSGIPQAHHRSGRPLKTLTQRLKGKEGRFRGSLSGKRVDFSSRTVISP 331
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPNL + +VG+P+ +A LT PE VT+ N ++L VI GP+T+PG N++ DG K L
Sbjct: 332 DPNLDLGEVGVPMSIATKLTIPEIVTEWNIEKLKKLVINGPNTFPGVNYIVRPDGVKIRL 391
Query: 378 RY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFNEC 554
+ + +VA L +G +VERHL DGDVVLFNRQPSLH++SIM+H +V+P +TFR +
Sbjct: 392 DFVEDTLQVADQLEIGYLVERHLSDGDVVLFNRQPSLHQMSIMAHHVRVLPGKTFRLHPS 451
Query: 555 VC 560
VC
Sbjct: 452 VC 453
[235][TOP]
>UniRef100_A5DCV3 DNA-directed RNA polymerase II subunit RPB1 (Fragments) n=1
Tax=Pichia guilliermondii RepID=RPB1_PICGU
Length = 1579
Score = 184 bits (466), Expect = 5e-45
Identities = 99/179 (55%), Positives = 122/179 (68%), Gaps = 3/179 (1%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ A +M++D P L T +P++ I RLKGK GR RGNL GKRVDFS RTVIS
Sbjct: 300 LQFHVATYMDNDIAGQPQALQKTGRPIKSIRARLKGKEGRLRGNLMGKRVDFSARTVISG 359
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPNL +DQVG+P+ +ARTLTYPE VT +N RL V GP+ +PGA +V D G++ L
Sbjct: 360 DPNLDLDQVGVPISIARTLTYPEIVTPYNIHRLTEYVRNGPNEHPGAKYVIRDTGDRIDL 419
Query: 378 RYGNRKKVAKDLPL--GAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
RY R A D+ L G VERHL+D D VLFNRQPSLH++S+M H KV+P+ TFR N
Sbjct: 420 RYNKR---AGDIALQYGWKVERHLMDDDPVLFNRQPSLHKMSMMCHRVKVMPYSTFRLN 475
[236][TOP]
>UniRef100_UPI0000F24379 DNA-directed RNA polymerase II largest subunit (RNA polymerase II
subunit 1) (B220) n=1 Tax=Pichia stipitis CBS 6054
RepID=UPI0000F24379
Length = 1739
Score = 183 bits (465), Expect = 7e-45
Identities = 98/179 (54%), Positives = 123/179 (68%), Gaps = 3/179 (1%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ A +M++D P L T +P++ I RLKGK GR RGNL GKRVDFS RTVIS
Sbjct: 296 LQFHVATYMDNDIAGQPQALQKTGRPIKSIRARLKGKEGRLRGNLMGKRVDFSARTVISG 355
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPNL +DQVG+P+ +ARTL+YPE VT +N RL V GP+ +PGA +V D G++ L
Sbjct: 356 DPNLDLDQVGVPISIARTLSYPEVVTPYNIHRLTEYVRNGPNEHPGAKYVIRDTGDRIDL 415
Query: 378 RYGNRKKVAKDLPL--GAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
RY R A D+ L G VERHL+D D VLFNRQPSLH++S+M+H KV+P+ TFR N
Sbjct: 416 RYNKR---AGDIALQYGWKVERHLMDNDPVLFNRQPSLHKMSMMAHRVKVMPYSTFRLN 471
[237][TOP]
>UniRef100_Q2PYS2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dimargaris
bacillispora RepID=Q2PYS2_9FUNG
Length = 753
Score = 183 bits (465), Expect = 7e-45
Identities = 93/179 (51%), Positives = 125/179 (69%), Gaps = 3/179 (1%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
L+ A +MN+D + +P L + +PL+ I RLKGK GR RGNL GKRVDFS RTVI+
Sbjct: 230 LEYHIATYMNNDVSGIPQALQKSGRPLKSIRARLKGKEGRLRGNLMGKRVDFSARTVITG 289
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPNL +D+VG+P +AR LTYPE VT +N +L AV GP +PGA ++ D+G++ L
Sbjct: 290 DPNLSIDEVGVPRSIARNLTYPELVTPYNIHQLQQAVRNGPTQHPGAKYIVRDNGDRIDL 349
Query: 378 RYGNRKKVAKDLPL--GAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
RY K+ ++PL G VERHLV GD+V+FNRQPSLH++S+M H +V+P+ TFR N
Sbjct: 350 RY---NKLGGEIPLQYGWRVERHLVSGDLVIFNRQPSLHKMSMMGHKVRVMPYSTFRLN 405
[238][TOP]
>UniRef100_Q2PYR1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Spiromyces aspiralis
RepID=Q2PYR1_9FUNG
Length = 1022
Score = 183 bits (465), Expect = 7e-45
Identities = 94/179 (52%), Positives = 122/179 (68%), Gaps = 3/179 (1%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ FMN++ + LP L + +P+R I RLKGK GR RGNL GKRVDFS RTVI+
Sbjct: 238 LQFHVVTFMNNEISGLPQALQKSGRPIRSIRARLKGKEGRLRGNLMGKRVDFSARTVITG 297
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPN+ +D+VG+P +AR LTYPE VT +N ++L V GP +PGA +V D G + L
Sbjct: 298 DPNISIDEVGVPRSIARNLTYPEVVTPYNIEKLQELVRNGPTEHPGAKYVIRDTGERIDL 357
Query: 378 RYGNRKKVAKDLPL--GAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
RY R D+PL G VERH++DGDVV+FNRQPSLH++S+M H +V+P+ TFR N
Sbjct: 358 RYNKR---GGDIPLAIGYRVERHIMDGDVVIFNRQPSLHKMSMMGHRVRVLPYSTFRLN 413
[239][TOP]
>UniRef100_A3GID7 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
RepID=A3GID7_PICST
Length = 1739
Score = 183 bits (465), Expect = 7e-45
Identities = 98/179 (54%), Positives = 123/179 (68%), Gaps = 3/179 (1%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ A +M++D P L T +P++ I RLKGK GR RGNL GKRVDFS RTVIS
Sbjct: 296 LQFHVATYMDNDIAGQPQALQKTGRPIKSIRARLKGKEGRLRGNLMGKRVDFSARTVISG 355
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPNL +DQVG+P+ +ARTL+YPE VT +N RL V GP+ +PGA +V D G++ L
Sbjct: 356 DPNLDLDQVGVPISIARTLSYPEVVTPYNIHRLTEYVRNGPNEHPGAKYVIRDTGDRIDL 415
Query: 378 RYGNRKKVAKDLPL--GAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
RY R A D+ L G VERHL+D D VLFNRQPSLH++S+M+H KV+P+ TFR N
Sbjct: 416 RYNKR---AGDIALQYGWKVERHLMDNDPVLFNRQPSLHKMSMMAHRVKVMPYSTFRLN 471
[240][TOP]
>UniRef100_A1YIB4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Furculomyces
boomerangus RepID=A1YIB4_9FUNG
Length = 1024
Score = 183 bits (465), Expect = 7e-45
Identities = 94/179 (52%), Positives = 123/179 (68%), Gaps = 3/179 (1%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ A FMN++ + LP L + +P++ I RLKGK GR RGNL GKRVDFS RTVI+
Sbjct: 235 LQFHVATFMNNEISGLPQALQKSGRPIKSIRARLKGKEGRLRGNLMGKRVDFSARTVITG 294
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPN+ +DQVG+P +AR +TYPE VT +N ++L V GP+ +PGA +V D G + L
Sbjct: 295 DPNIDIDQVGVPRSIARNMTYPEVVTPYNIEKLQEMVQNGPNEHPGAKYVIRDSGERIDL 354
Query: 378 RYGNRKKVAKDLPL--GAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
RY R D+PL G VERH++D DVV+FNRQPSLH++S+M H KV+P+ TFR N
Sbjct: 355 RYSKR---GGDIPLRIGYRVERHMLDDDVVIFNRQPSLHKMSMMGHRVKVMPYSTFRLN 410
[241][TOP]
>UniRef100_A8TEB8 DNA-directed RNA polymerase n=1 Tax=Methanococcus voltae A3
RepID=A8TEB8_METVO
Length = 888
Score = 183 bits (465), Expect = 7e-45
Identities = 95/194 (48%), Positives = 130/194 (67%), Gaps = 9/194 (4%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
D W+ LQ + +++A +PP + +PLR ++QRLKGK GRFR NL+GKRV+FS R
Sbjct: 267 DLWDLLQYHINTYFDNEAPGIPPARHRSGRPLRTLAQRLKGKEGRFRHNLAGKRVNFSAR 326
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISPDP L +++VGIP +A+ LT PE+VT HN + + G + +PG N+V
Sbjct: 327 TVISPDPRLSINEVGIPELIAKELTVPEKVTAHNIDHIKELLKNGSEIHPGVNYVIKTIK 386
Query: 363 NKR------FLRYGNRKK--VAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAK 518
NK +R ++ K A+++ G VERHL+DGDVVL+NRQPSLHR+SIM+H K
Sbjct: 387 NKEGKQENFSIRVSDKNKDHWAENIEEGMSVERHLIDGDVVLYNRQPSLHRMSIMAHKVK 446
Query: 519 VVPHRTFRFNECVC 560
V+P+RTFR N CVC
Sbjct: 447 VLPYRTFRHNLCVC 460
[242][TOP]
>UniRef100_UPI00003BD271 hypothetical protein DEHA0A14036g n=1 Tax=Debaryomyces hansenii
CBS767 RepID=UPI00003BD271
Length = 1749
Score = 183 bits (464), Expect = 9e-45
Identities = 98/179 (54%), Positives = 123/179 (68%), Gaps = 3/179 (1%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ A +M++D P L T +P++ I RLKGK GR RGNL GKRVDFS RTVIS
Sbjct: 301 LQFHVATYMDNDIAGQPQALQKTGRPIKSIRARLKGKEGRLRGNLMGKRVDFSARTVISG 360
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPNL +DQVG+P+ +ARTL+YPE VT +N RL V GP+ +PGA +V D G++ L
Sbjct: 361 DPNLDLDQVGVPISIARTLSYPEIVTPYNIHRLTEYVRNGPNEHPGAKYVIRDTGDRIDL 420
Query: 378 RYGNRKKVAKDLPL--GAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
RY R A D+ L G VERHL+D D VLFNRQPSLH++S+M+H KV+P+ TFR N
Sbjct: 421 RYNKR---AGDIALQYGWKVERHLMDDDPVLFNRQPSLHKMSMMAHRVKVMPYSTFRLN 476
[243][TOP]
>UniRef100_Q2PYS6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Polychytrium
aggregatum RepID=Q2PYS6_9FUNG
Length = 1016
Score = 183 bits (464), Expect = 9e-45
Identities = 96/179 (53%), Positives = 122/179 (68%), Gaps = 3/179 (1%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ A +MN+D + +P + +PL+ I RLKGK GR RGNL GKRVDFS RTVI+
Sbjct: 233 LQYHVATYMNNDISGIPKAQQKSGRPLKSIRARLKGKEGRLRGNLMGKRVDFSARTVITG 292
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPNL +DQVG+P +AR LT+PE VT +N RL V GP +PGA +V D+G + L
Sbjct: 293 DPNLSIDQVGVPRSIARNLTFPENVTPYNIARLQKYVQNGPMEHPGAKYVIRDNGERIDL 352
Query: 378 RYGNRKKVAKDLPL--GAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
RY KV +D+ L G VERHL+D DVV+FNRQPSLH++S+M H KV+P+ TFR N
Sbjct: 353 RY---SKVGRDIHLQPGYKVERHLMDDDVVIFNRQPSLHKMSMMGHRVKVMPYSTFRLN 408
[244][TOP]
>UniRef100_Q2PYQ1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Olpidium brassicae
RepID=Q2PYQ1_9FUNG
Length = 585
Score = 183 bits (464), Expect = 9e-45
Identities = 95/179 (53%), Positives = 122/179 (68%), Gaps = 3/179 (1%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ A +MN++ P L + +PL+ I RLKGK GR RGNL GKRVDFS RTVI+
Sbjct: 61 LQFHVATYMNNELAGQPQALQKSGRPLKSIRARLKGKEGRLRGNLMGKRVDFSARTVITG 120
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPNL +D+VG+P +AR LT+PE VT +N R+ V GP+ +PGA FV D G + L
Sbjct: 121 DPNLSIDEVGVPRSIARNLTFPEIVTPYNIDRMQELVRNGPNEHPGAKFVIRDTGERIDL 180
Query: 378 RYGNRKKVAKDLPL--GAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
RY R + D+PL G VERHLVDGDV++FNRQPSLH++S+M H +V+P+ TFR N
Sbjct: 181 RYHKR---SGDIPLQVGWKVERHLVDGDVIIFNRQPSLHKMSMMGHKVRVMPYSTFRLN 236
[245][TOP]
>UniRef100_B5RSM9 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
RepID=B5RSM9_DEBHA
Length = 1749
Score = 183 bits (464), Expect = 9e-45
Identities = 98/179 (54%), Positives = 123/179 (68%), Gaps = 3/179 (1%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ A +M++D P L T +P++ I RLKGK GR RGNL GKRVDFS RTVIS
Sbjct: 301 LQFHVATYMDNDIAGQPQALQKTGRPIKSIRARLKGKEGRLRGNLMGKRVDFSARTVISG 360
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPNL +DQVG+P+ +ARTL+YPE VT +N RL V GP+ +PGA +V D G++ L
Sbjct: 361 DPNLDLDQVGVPISIARTLSYPEIVTPYNIHRLTEYVRNGPNEHPGAKYVIRDTGDRIDL 420
Query: 378 RYGNRKKVAKDLPL--GAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
RY R A D+ L G VERHL+D D VLFNRQPSLH++S+M+H KV+P+ TFR N
Sbjct: 421 RYNKR---AGDIALQYGWKVERHLMDDDPVLFNRQPSLHKMSMMAHRVKVMPYSTFRLN 476
[246][TOP]
>UniRef100_A1YIB0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hydnum repandum
RepID=A1YIB0_9HOMO
Length = 1010
Score = 183 bits (464), Expect = 9e-45
Identities = 93/177 (52%), Positives = 121/177 (68%), Gaps = 1/177 (0%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ A +M++D + +P + + +P++ I RLKGK GR RGNL GKRVDFS RTVI+
Sbjct: 226 LQFHVATYMDNDISGIPQAMQKSGRPVKAIRSRLKGKEGRLRGNLMGKRVDFSSRTVITG 285
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPN+ +D+VG+P +A TLTYPERVT +N +L V GP YPGA +V D G + L
Sbjct: 286 DPNIMLDEVGVPKSIAMTLTYPERVTPYNIAQLQELVRNGPREYPGARYVVRDTGERIDL 345
Query: 378 RYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
RY K+ L G +VERHL DGD VLFNRQPSLH++S+MSH K++P+ TFR N
Sbjct: 346 RY--NKRADAFLQYGWIVERHLRDGDYVLFNRQPSLHKMSMMSHRVKLMPYSTFRLN 400
[247][TOP]
>UniRef100_B3T303 DNA-directed RNA polymerase n=1 Tax=uncultured marine crenarchaeote
HF4000_ANIW93I24 RepID=B3T303_9ARCH
Length = 1264
Score = 183 bits (464), Expect = 9e-45
Identities = 93/182 (51%), Positives = 128/182 (70%), Gaps = 2/182 (1%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ + +++ + +P + +PL+ ++QRLKGK GRFRG+LSGKRVDFS RTVISP
Sbjct: 272 LQYHCTTYFDNEVSGIPQAHHRSGRPLKTLTQRLKGKEGRFRGSLSGKRVDFSSRTVISP 331
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPNL + +VG+P +A LT PE VT+ N ++L VI GP+T+PG N++ DG K L
Sbjct: 332 DPNLDLGEVGVPTSIASKLTIPEIVTEWNIEKLKKLVINGPNTFPGVNYIVRPDGVKIRL 391
Query: 378 RY-GNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFNEC 554
+ + +VA L +G +VERHL DGDVVLFNRQPSLH++SIM+H +V+P +TFR +
Sbjct: 392 DFVEDTLQVANQLEIGYLVERHLSDGDVVLFNRQPSLHQMSIMAHHVRVLPGKTFRLHPS 451
Query: 555 VC 560
VC
Sbjct: 452 VC 453
[248][TOP]
>UniRef100_Q5I2R7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hygrophoropsis
aurantiaca RepID=Q5I2R7_9HOMO
Length = 991
Score = 182 bits (463), Expect = 1e-44
Identities = 94/177 (53%), Positives = 119/177 (67%), Gaps = 1/177 (0%)
Frame = +3
Query: 21 LQVEAARFMNSDATNLPP-LASTAKPLRGISQRLKGKTGRFRGNLSGKRVDFSGRTVISP 197
LQ A +M++D +P L + +P++ I RLKGK GR RGNL GKRVDFS RTVI+
Sbjct: 214 LQFHVATYMDNDIAGIPQALQKSGRPVKAIRARLKGKEGRLRGNLMGKRVDFSARTVITG 273
Query: 198 DPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDGNKRFL 377
DPNL++D+VG+P +A LTYPERVT +N L V GP YPGA +V D G + L
Sbjct: 274 DPNLQLDEVGVPRSIAMNLTYPERVTPYNIAYLQELVRNGPTAYPGARYVVRDTGERIDL 333
Query: 378 RYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKVVPHRTFRFN 548
RY K+ L G +VERHL DGD VLFNRQPSLH++S+MSH K++P+ TFR N
Sbjct: 334 RY--NKRADAFLQYGWIVERHLKDGDFVLFNRQPSLHKMSMMSHRVKLMPYSTFRLN 388
[249][TOP]
>UniRef100_A9CTM9 DNA-directed RNA polymerase n=1 Tax=Enterocytozoon bieneusi H348
RepID=A9CTM9_ENTBH
Length = 1174
Score = 182 bits (463), Expect = 1e-44
Identities = 95/193 (49%), Positives = 133/193 (68%), Gaps = 8/193 (4%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLASTAKP-LRGISQRLKGKTGRFRGNLSGKRVDFSGR 182
+ W++LQ++ A ++NSD LP + T ++ I RLKGK GRFR NLSGKRVDFSGR
Sbjct: 257 EDWDYLQLQIALYINSD---LPSIHITNNDNIKSIIHRLKGKQGRFRMNLSGKRVDFSGR 313
Query: 183 TVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPGANFVETDDG 362
TVISP+PNL ++Q+G+P +A +T PE+VT N++ L V GP+ GAN++ ++
Sbjct: 314 TVISPNPNLSIEQIGVPKEIALEMTIPEKVTVFNKEELQILVNNGPNCIDGANYIIRNEV 373
Query: 363 N-------KRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSAKV 521
K FL++ KV ++L +G +VERH+ DGD+VLFNRQPSLHR+SIM+H K+
Sbjct: 374 RNNETRTFKIFLKFAKNPKV-RELKVGDIVERHIKDGDIVLFNRQPSLHRMSIMAHRVKL 432
Query: 522 VPHRTFRFNECVC 560
+RTF+FNE VC
Sbjct: 433 HDNRTFQFNESVC 445
[250][TOP]
>UniRef100_O26399 DNA-directed RNA polymerase n=1 Tax=Methanothermobacter
thermautotrophicus str. Delta H RepID=O26399_METTH
Length = 664
Score = 182 bits (463), Expect = 1e-44
Identities = 94/195 (48%), Positives = 129/195 (66%), Gaps = 10/195 (5%)
Frame = +3
Query: 6 DGWEWLQVEAARFMNSDATNLPPLAS-TAKPLRGISQRLKGKTG---------RFRGNLS 155
D WE LQ + +++A+ + P + + L + QRLK K G RFRGNLS
Sbjct: 46 DLWELLQYHVTTYFDNEASGVTPARQRSGRQLLTLMQRLKSKKGMFSSELSKGRFRGNLS 105
Query: 156 GKRVDFSGRTVISPDPNLRVDQVGIPLRVARTLTYPERVTKHNRKRLAAAVIRGPDTYPG 335
GKRV+FS RTVISPDPN+ +++VG+P +AR +T P VT+ N R+ + GPD +PG
Sbjct: 106 GKRVNFSARTVISPDPNISINEVGVPEIIAREVTVPVYVTEWNIDRMREYIENGPDVHPG 165
Query: 336 ANFVETDDGNKRFLRYGNRKKVAKDLPLGAVVERHLVDGDVVLFNRQPSLHRISIMSHSA 515
AN+V DG + + N + V ++L G VVERHL DGD+VLFNRQPSLHR+S+M+H A
Sbjct: 166 ANYVIRPDGRRIRISSKNTETVIENLKPGYVVERHLKDGDIVLFNRQPSLHRMSLMAHRA 225
Query: 516 KVVPHRTFRFNECVC 560
+V+P++TFR N CVC
Sbjct: 226 RVLPYKTFRLNLCVC 240