[UP]
[1][TOP]
>UniRef100_C1AWM5 Putative uncharacterized protein n=1 Tax=Rhodococcus opacus B4
RepID=C1AWM5_RHOOB
Length = 615
Score = 59.7 bits (143), Expect = 1e-07
Identities = 54/166 (32%), Positives = 73/166 (43%), Gaps = 21/166 (12%)
Frame = +3
Query: 72 ACTAAARRA--AAAERRRRRAYAVSAKPPLLPRPSSRPGLGVVPSVGS-------ASAPP 224
A AA R A AAA R V P P++ P + VP+VGS A+ PP
Sbjct: 345 ALLAADRDAGHAAAPTVARMPVVVPTAAPATAAPAAAPAVPAVPAVGSDADTVVLAARPP 404
Query: 225 APPPAAPDVAG-----SAGVVDLARSGLAAAEGGGVDSAAV--SMCSGSSGSDREEDGGT 383
AP P P G AG++ + + +A GG+ V + SSGS + GT
Sbjct: 405 APRPVDPGPTGMSRKKKAGIITASAAAIALLAAGGLSLGTVFDVAPASSSGSTTSQSSGT 464
Query: 384 VAARAGAVTGVASGAPSAG---PSLDAARVLDAVRAP--AVGITRP 506
A A + +GV + A + G P +AA V DA P A G+ P
Sbjct: 465 SAGSA-STSGVPAEAAATGAVAPGTEAAGVADATGVPGTAAGVATP 509
[2][TOP]
>UniRef100_Q9RKR9 Putative multi-domain regulatory protein n=1 Tax=Streptomyces
coelicolor RepID=Q9RKR9_STRCO
Length = 1334
Score = 59.3 bits (142), Expect = 2e-07
Identities = 44/137 (32%), Positives = 60/137 (43%), Gaps = 14/137 (10%)
Frame = -1
Query: 493 PTAGARTASRTRAASRDGPAEGA-PEATPVTAPALAA-----------TVPPSSSRSDPL 350
P +GA AS T AS G A G P + P + PA+A P ++ S
Sbjct: 271 PASGAGAASGTDVASGAGAASGPDPASGPASGPAVAPGSGGGPAPGWWPAPGTAPGSSTA 330
Query: 349 LPLHMLTAAESTPPPSAAARPDRARSTTPAEPA--TSGAAGGGAGGADADPTDGTTPRPG 176
P +AA++ P P + P A + A PA T+G A G + P GTTP PG
Sbjct: 331 PPHDTASAADTAPAPGPTSAPGTAPAAGTAAPAPGTAGPAPGTSYAPGTAPVAGTTPAPG 390
Query: 175 RDDGRGRSGGLAETAYA 125
G +G +T+YA
Sbjct: 391 TAPAPGTAGPARDTSYA 407
[3][TOP]
>UniRef100_Q2J728 Translation initiation factor IF-2 n=1 Tax=Frankia sp. CcI3
RepID=IF2_FRASC
Length = 1062
Score = 57.0 bits (136), Expect = 8e-07
Identities = 43/120 (35%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Frame = -1
Query: 493 PTAGARTASRTRAASRDGPAEGAPEATPVTAPALAATVPPSSSRSDPLLPLHMLTAAEST 314
PTAG TA R R GP AP P T P+ A P + R +A +S
Sbjct: 207 PTAGGPTAGGPRPGPRPGPRSAAPGNNPYTTPS-AGPRPSAGPRP---------SAGQSG 256
Query: 313 PPPSAAARPDRARSTT--PAEPATSGAAGGGAGGADADPT-DGTTPRPGRDDGRGRSGGL 143
PP + RP RS T P P G GG G PT G PRPG G GG+
Sbjct: 257 PPSTPTPRPSAPRSGTPRPGTPRPGGPRPGGTGAGGPRPTPGGMPPRPG-GPRSGAGGGM 315
[4][TOP]
>UniRef100_O13028 Antifreeze glycopeptide AFGP polyprotein n=1 Tax=Boreogadus saida
RepID=O13028_BORSA
Length = 507
Score = 56.6 bits (135), Expect = 1e-06
Identities = 57/169 (33%), Positives = 73/169 (43%), Gaps = 7/169 (4%)
Frame = -1
Query: 493 PTAGARTASRTRAASRDGPAEGAPEATPVTAP--ALAATVPPSSSRSDPLLPLHMLTAAE 320
P A AR A+ AA+ PA A AT TA A AAT ++ + P T A
Sbjct: 28 PAAAARAATPATAAT---PATAATPATAATAATEATAATAATPATAATPATAATAATTAA 84
Query: 319 STPPPSAAARPDRA-RSTTP---AEPATSGAAGGGAGGADAD-PTDGTTPRPGRDDGRGR 155
+ + AA P RA R+ TP A PAT+ A A A A+ P TP
Sbjct: 85 TAATAATAATPARAARAATPATAATPATAATAATAATAATAETPARAATPATAATPATAA 144
Query: 154 SGGLAETAYARRRRRSAAAARRAAAVHASQPYALSPSRISD*ARAAREA 8
+ A TA +AA A RA A+ A +P+ + ARAAR A
Sbjct: 145 TPATAATAATAATSATAATAARA----ATPATAATPATPATAARAARAA 189
Score = 53.9 bits (128), Expect = 7e-06
Identities = 51/172 (29%), Positives = 66/172 (38%), Gaps = 14/172 (8%)
Frame = -1
Query: 481 ARTASRTRAASRDGPAEGAPEATPVTAPALAATVPPSSSRSDPLLPLHM--LTAAESTPP 308
A A+ AA+ PA A ATP TAP A P+++ + P AA + P
Sbjct: 204 ATAATAATAATAATPARAARAATPATAPTPATAATPATAATAATAPTAATPARAARAATP 263
Query: 307 PSAAARPDRARSTTPAEPATSG-------AAGGGAGGADADPTDGTTPRPGRDDGRGRSG 149
+AA A TPA PAT+ AA A P TP +
Sbjct: 264 ATAATLATAATPATPATPATAATDATAATAATPARAATPATPATAATPATPATAATAATA 323
Query: 148 GLAETA-----YARRRRRSAAAARRAAAVHASQPYALSPSRISD*ARAAREA 8
A TA AR + AA AA A+ A + + + ARAAR A
Sbjct: 324 ATAATAATPARAARAATPATAATPATAATAATAATAATAATAATPARAARAA 375
[5][TOP]
>UniRef100_UPI0000F2D3F0 PREDICTED: similar to splicing factor proline/glutamine-rich
(polypyrimidine tract binding protein associated), n=1
Tax=Monodelphis domestica RepID=UPI0000F2D3F0
Length = 700
Score = 55.5 bits (132), Expect = 2e-06
Identities = 44/143 (30%), Positives = 61/143 (42%), Gaps = 6/143 (4%)
Frame = +3
Query: 33 SEILEGDNAYGCEACTAAARRAAAAERRRRRAYAVSAKPPLLPRPSSRPGLGVVPSVGSA 212
+++L A A AAA AAAA +++ A P P+P PG P+VG+A
Sbjct: 67 AQVLAQQQAQQAAAAAAAAAAAAAAAAAQQQ----QASSPDPPKPGLPPGSSPGPTVGTA 122
Query: 213 -----SAPPAPPPAAPDVAGSAGVVDLARSGLAAAEGGGVDSAAV-SMCSGSSGSDREED 374
SAP APPP + +G A SG +A G S++ ++ S SSG
Sbjct: 123 APASVSAPSAPPPGSGGPSGPGSASSQASSGPSAPPGAPQQSSSTPAVSSASSGGPPPPP 182
Query: 375 GGTVAARAGAVTGVASGAPSAGP 443
G + G G G GP
Sbjct: 183 PGAAGPKPGPSPGGPKGKMPGGP 205
[6][TOP]
>UniRef100_B9BBJ9 Putative membrane protein n=1 Tax=Burkholderia multivorans CGD1
RepID=B9BBJ9_9BURK
Length = 517
Score = 55.5 bits (132), Expect = 2e-06
Identities = 49/148 (33%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Frame = +3
Query: 72 ACTAAARRAAAAERRRRRAYAVSAKPPL-LPRPSSRPGLGVVPSVGSASAPPAPPPAAPD 248
A A + AA A A A P+ +P P++ P + + + SA A AAPD
Sbjct: 313 AAAAGSPVAATASASMSAADGAPAYEPIAVPVPAAMPDVAPGMTAAAVSAASAVANAAPD 372
Query: 249 VAGS------AGVVDLARSGLAAAEGGGVDSAAVSMCSGSSGSDREEDGGTVAARAGAVT 410
A AGVVD A +G AAA GG VD+ + G AA G V
Sbjct: 373 GAAGGAAVAGAGVVDAAAAGAAAAHGGVVDATGAGAAAAHEEVVDAARAGAAAAHEGVVD 432
Query: 411 GVASG-APSAGPSLDAARVLDAVRAPAV 491
+G AP+A +DA+ V AV AV
Sbjct: 433 AAGAGAAPAAEAVVDASAVDAAVIREAV 460
[7][TOP]
>UniRef100_A4K455 Antifreeze glycoprotein n=1 Tax=Boreogadus saida RepID=A4K455_BORSA
Length = 683
Score = 55.5 bits (132), Expect = 2e-06
Identities = 51/170 (30%), Positives = 66/170 (38%), Gaps = 6/170 (3%)
Frame = -1
Query: 493 PTAGARTASRTRAASRDGPAEGAPEATPVTA-----PALAATVPPSSSRSDPLLPLHMLT 329
P A A+ AA+ A A ATP A PA AAT +++ + P P T
Sbjct: 487 PATAATAATAATAATAATAATAATAATPARAARAATPATAATPATAATPATPATPATPAT 546
Query: 328 AAESTPPPSAAARPDRARSTTPAEPATSGAAGGGAGGAD-ADPTDGTTPRPGRDDGRGRS 152
AA + P AA A + TPA AT+ A A A A P TP +
Sbjct: 547 AATAATPARAARAATPATAATPATAATAATAATAATAATAATPARAATPATAATPATAAT 606
Query: 151 GGLAETAYARRRRRSAAAARRAAAVHASQPYALSPSRISD*ARAAREAVS 2
A TA + AA A A A +P+R + A AA A +
Sbjct: 607 AATAATA-------ATAATAATAPTPARAARAATPARAATAAAAATAATA 649
Score = 54.7 bits (130), Expect = 4e-06
Identities = 59/172 (34%), Positives = 73/172 (42%), Gaps = 10/172 (5%)
Frame = -1
Query: 493 PTAGARTASRTRAASRDGPAEGAPEATPVT--APALAATV--PPSSSRS----DPLLPLH 338
P AR A+ AA+ PA A ATP T PA AAT P ++R+ P
Sbjct: 514 PARAARAATPATAAT---PATAATPATPATPATPATAATAATPARAARAATPATAATPAT 570
Query: 337 MLTAAESTPPPSAAARPDRARSTTPAEPATSGAAGGGAGGADADP--TDGTTPRPGRDDG 164
TAA + +AA AR+ TPA AT A A A A T T P P R
Sbjct: 571 AATAATAATAATAATAATPARAATPATAATPATAATAATAATAATAATAATAPTPAR-AA 629
Query: 163 RGRSGGLAETAYARRRRRSAAAARRAAAVHASQPYALSPSRISD*ARAAREA 8
R + A TA A +AA A AA + A +P+R + A AA A
Sbjct: 630 RAATPARAATAAAAATAATAATAATAATAATAATLA-TPARAATPATAATPA 680
[8][TOP]
>UniRef100_UPI0000D661C1 PREDICTED: hypothetical protein n=1 Tax=Mus musculus
RepID=UPI0000D661C1
Length = 243
Score = 55.1 bits (131), Expect = 3e-06
Identities = 60/197 (30%), Positives = 73/197 (37%), Gaps = 42/197 (21%)
Frame = -1
Query: 526 DTSRLGWGRVMPTAGARTASRTRAA-SRDGPAEGAPEATPVTA--PALAATVPPSSSRSD 356
+T+ GW P + A +R A S +G EG PE T +T P PP S
Sbjct: 10 ETAPEGW---RPRSAAPGRARVGAGGSGNGHREGPPEGTGMTPTYPGRRRVTPPPSRTCG 66
Query: 355 PLLPLHMLTAAESTPPPSAAARPDRARSTTPAEPATSGAAG------------------G 230
L P PPP+A +P A S P E A GAAG
Sbjct: 67 RLAPASPSPRPPHAPPPAAWDQPPTAPSPGPEEDAGGGAAGPRPVPARTAPPPRRNKARR 126
Query: 229 GAGGADADPT----------DGTTPRPGRD-------DGRGRSGGLAETAYARRRRRS-- 107
G G A T G+ PRPGR + RGR G A RRRRRS
Sbjct: 127 GRAGERAGSTHRGRAGPGVGPGSPPRPGRGRAPAAVRELRGRGGSRARQPGQRRRRRSLL 186
Query: 106 --AAAARRAAAVHASQP 62
+ RR ++ S P
Sbjct: 187 PPGSLLRRVFSLAGSPP 203
[9][TOP]
>UniRef100_Q73WN4 Putative uncharacterized protein n=1 Tax=Mycobacterium avium subsp.
paratuberculosis RepID=Q73WN4_MYCPA
Length = 363
Score = 54.3 bits (129), Expect = 5e-06
Identities = 51/142 (35%), Positives = 61/142 (42%), Gaps = 4/142 (2%)
Frame = +3
Query: 72 ACTAAARRAAAAERRRRRAYAVSAKPPLLPRPSSRPGLGVVPSVGSASAPPAPPPAAPDV 251
A A AAAA A +A PP P P++ P G V +A P PPP AP
Sbjct: 145 AHAAGPAPAAAAPSAPAPVAAPAATPPSAPAPAAAPAPGPVQPATVPAAAPVPPPPAPAA 204
Query: 252 AGSA--GVVDLARSGLAAAEGGGVDSAAV-SMCSGSSGSDREEDGGTVAARAGAVTGVAS 422
A A G D A + AAA G G D+ S G++ DG + A A +V G A
Sbjct: 205 AAPATPGAPDAAPAP-AAAPGFGADAPPTQDFMYPSIGTNCLADGSSAIATALSVAGPAK 263
Query: 423 -GAPSAGPSLDAARVLDAVRAP 485
AP GP A V AV P
Sbjct: 264 IPAPGPGPG-QTAYVFTAVGTP 284
[10][TOP]
>UniRef100_A4X1E8 DNA polymerase III, subunits gamma and tau n=1 Tax=Salinispora
tropica CNB-440 RepID=A4X1E8_SALTO
Length = 808
Score = 53.9 bits (128), Expect = 7e-06
Identities = 58/161 (36%), Positives = 70/161 (43%), Gaps = 24/161 (14%)
Frame = -1
Query: 442 GPAEG---APEATPVTAPA-----LAATVPPSSSRSDP----LLPLHMLTAAESTPP--- 308
GPA G A A P TAPA +A PP SS D + P +A E P
Sbjct: 577 GPAAGPRAAGPARPATAPARPDPAVAPAAPPRSSAGDGAVDGMAPRSAGSADEQEWPEPA 636
Query: 307 -PSAAARPDRARSTTPAEPATSGAAGGG--AGGADADPTDGTTPRPGRDDGRGRSGGLAE 137
P AA P+ A T PAT+ G G A A A G+T GR G G + A
Sbjct: 637 RPGGAAPPEPAAGTAEEWPATARPGGAGVDATAAAAAGPGGSTTGGGRASGAGVAP--AA 694
Query: 136 TAYAR------RRRRSAAAARRAAAVHASQPYALSPSRISD 32
+A +R R SA AA RAAA +Q A SP R ++
Sbjct: 695 SAVSRPPVTSGARASSAIAAARAAAAGGAQRSAASPRRTAE 735
[11][TOP]
>UniRef100_Q8CJQ8 Translation initiation factor IF-2 n=1 Tax=Streptomyces coelicolor
RepID=IF2_STRCO
Length = 1033
Score = 53.5 bits (127), Expect = 9e-06
Identities = 47/132 (35%), Positives = 54/132 (40%), Gaps = 7/132 (5%)
Frame = -1
Query: 493 PTAGARTASRTRAASRDGPAEGAPEATPVTAPALAATVPPSSSRSDP---LLPLHMLTAA 323
P+ A A AA R A AP A AP+ A P R P P A
Sbjct: 83 PSQAAPAAGDRAAAPRPSAAPKAPAAQQPAAPSAPAPAPSQGPRPTPGPKPAPRPAPAAP 142
Query: 322 ESTPPPSAAARPDRARSTTPAEPATSGAAGGGAGGADADPTDGTTPRPGRD----DGRGR 155
E T PP+A A P +TPA PA SG GGA P PG+D G+GR
Sbjct: 143 EFTAPPAAPAAP-----STPA-PAPSGPKPGGARPGAPKPGGARPSGPGQDRGQQGGQGR 196
Query: 154 SGGLAETAYARR 119
GG A A+R
Sbjct: 197 PGGQRPGAPAQR 208