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[1][TOP]
>UniRef100_C8XBK0 Transcriptional regulator, Fis family n=1 Tax=Nakamurella
multipartita DSM 44233 RepID=C8XBK0_9ACTO
Length = 245
Score = 58.2 bits (139), Expect = 3e-07
Identities = 52/144 (36%), Positives = 63/144 (43%), Gaps = 28/144 (19%)
Frame = -3
Query: 467 PTARPAAQRGPSRHRRRPRRTRRRH-HRGAPRTAPTPCGGWGRGALGR-----TPPRSHG 306
P+ R + GP RPRR +RH R P TA G + GR TP S G
Sbjct: 15 PSPRSPERAGPGPRLLRPRRDPQRHPRRRRPTTAAARRSGPAAPSTGRARWLWTPTGSRG 74
Query: 305 ---------PPSRP--GSRRRSCP*-------APSPGRP----GWLPAGRRGGRCRWQWR 192
PPSRP G+ RR P A PG+P G +P+ R GR R R
Sbjct: 75 RRAAPSPCLPPSRPPRGTARRPIPSGRPIRASATGPGQPATGRGAVPSRHRPGRRRIGGR 134
Query: 191 RQPGWRQAYPPGGRHQRAGRPRAW 120
R+PG+R + PG R R G R W
Sbjct: 135 RRPGYRHPHRPGPR--RPGPHRLW 156
[2][TOP]
>UniRef100_C6NW58 Putative ATP-dependent RNA helicase n=1 Tax=Acidithiobacillus
caldus ATCC 51756 RepID=C6NW58_9GAMM
Length = 386
Score = 55.8 bits (133), Expect = 1e-06
Identities = 42/114 (36%), Positives = 47/114 (41%), Gaps = 10/114 (8%)
Frame = -3
Query: 485 RPCRGTPTARPAAQRGPSRHRRRPRRTRRRHHRGAPRTAPTPCGGWGRGALGRTPPRSHG 306
RP RG P + S RR R T RR R R P GG GR P S G
Sbjct: 113 RPTRGRSAGSPRRRPTGSTGRRPTRPTGRRPTRPTGRRPTRPTGGRPTRPTGRRPTGSTG 172
Query: 305 P-PSRPGSRRRSCP*APSPGRPGWLPAGRRGGRCRWQWRRQ---------PGWR 174
P+RP RR + P P RP LP R G RW+ RR+ P WR
Sbjct: 173 RRPTRPTGRRPTRPTGRRPARPTGLPRRRWGRGTRWRRRRRCHPQRTEKGPRWR 226
[3][TOP]
>UniRef100_C4RG10 ATPase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RG10_9ACTO
Length = 1011
Score = 55.8 bits (133), Expect = 1e-06
Identities = 49/115 (42%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Frame = -3
Query: 467 PTARPAAQRGPSRHRRRPRRTRRRHHRGAPR--TAPTPCGGWGRGALGRTPPRSHGPPSR 294
P+AR A+RGP R R R RR G PR A P G GR A GR R+H P R
Sbjct: 150 PSARRDARRGP-RALRGGGRGDRRGSPGRPRPPAAAGPGGAGGRPAAGRGTRRAH--PPR 206
Query: 293 PGSRRRSCP*APSPGRPGWLPAGRRGGRCRWQWRRQPGWRQAYPPGGRHQRAGRP 129
P RR A R G PA + G R + R+PG R+A G R +RAGRP
Sbjct: 207 PAHDRRP---AGDGARRGGGPAAQAGRPAR-RGTRRPGPRRAAGRGRRGRRAGRP 257
[4][TOP]
>UniRef100_D0EL85 Truncated bell-like homeodomain protein n=1 Tax=Hordeum vulgare
RepID=D0EL85_HORVU
Length = 238
Score = 55.5 bits (132), Expect = 2e-06
Identities = 55/163 (33%), Positives = 63/163 (38%), Gaps = 14/163 (8%)
Frame = +3
Query: 18 DLAAITPPPTRSAHDRY----------PSDAHRTPPPLEPWH-VQPRSRAP---CSLVAP 155
D AA PPT A PS R PPP P H PR R CS +P
Sbjct: 56 DAAAEDSPPTPLARTTSTTRPGRGLPRPSTPTRPPPP--PTHRTAPRCRRASSWCSTGSP 113
Query: 156 SWRVRLPPSRLAAPLPPAATSTPPCGQPPRTSR*WCLRAAAAATARPTWWPV*PRRGATK 335
R SR + + S PP PPR R + A R P PR
Sbjct: 114 PSRSPRSSSRTSPRTTSRSPSPPPRPIPPRRPRRPGSSRSREAPGRAVPSPATPR----- 168
Query: 336 CASSPPSAWRRRGAWRAAVVAAARPTRPTAVAGWTSLGCRACS 464
C+ P S+ RRRG WR + ARP PTA + RACS
Sbjct: 169 CSGDPSSSSRRRGCWRRSATWEARPRTPTAAS-----RTRACS 206
[5][TOP]
>UniRef100_UPI0000F2EC68 PREDICTED: hypothetical protein n=1 Tax=Monodelphis domestica
RepID=UPI0000F2EC68
Length = 287
Score = 55.1 bits (131), Expect = 2e-06
Identities = 51/145 (35%), Positives = 59/145 (40%), Gaps = 14/145 (9%)
Frame = -3
Query: 485 RPCRGTPTARPAAQ-RGPS------RHRRRPRRTRRRHHRGAPRTAPTPCGGWGRGALG- 330
R C G T P + RG + + PRR RH G P + TP G+ RG
Sbjct: 45 RTCSGGGTTAPGRRDRGQALRAAFLSRSKTPRRGGTRHAHGPPTASGTP-PGYRRGRAAP 103
Query: 329 ----RTPPRSHGPPSR--PGSRRRSCP*APSPGRPGWLPAGRRGGRCRWQWRRQPGWRQA 168
RTPP PP R PG+ R P AP+ GRP R R R RR P A
Sbjct: 104 EGTHRTPPGRPQPPRRLEPGTGERHRPKAPAVGRPP-PDTQPRSRRARGGHRRPPLTVGA 162
Query: 167 YPPGGRHQRAGRPRAWLHVPWFEGG 93
P R R+G P W WF G
Sbjct: 163 ATPPWRPSRSGDPCVWAGA-WFPSG 186
[6][TOP]
>UniRef100_UPI0000F2EBF1 PREDICTED: hypothetical protein n=1 Tax=Monodelphis domestica
RepID=UPI0000F2EBF1
Length = 287
Score = 55.1 bits (131), Expect = 2e-06
Identities = 51/145 (35%), Positives = 59/145 (40%), Gaps = 14/145 (9%)
Frame = -3
Query: 485 RPCRGTPTARPAAQ-RGPS------RHRRRPRRTRRRHHRGAPRTAPTPCGGWGRGALG- 330
R C G T P + RG + + PRR RH G P + TP G+ RG
Sbjct: 45 RTCSGGGTTAPGRRDRGQALRAAFLSRSKTPRRGGTRHAHGPPTASGTP-PGYRRGRAAP 103
Query: 329 ----RTPPRSHGPPSR--PGSRRRSCP*APSPGRPGWLPAGRRGGRCRWQWRRQPGWRQA 168
RTPP PP R PG+ R P AP+ GRP R R R RR P A
Sbjct: 104 EGTHRTPPGRPQPPRRLEPGTGERHRPKAPAVGRPP-PDTQPRSRRARGGHRRPPLTVGA 162
Query: 167 YPPGGRHQRAGRPRAWLHVPWFEGG 93
P R R+G P W WF G
Sbjct: 163 ATPPWRPSRSGDPCVWAGA-WFPSG 186
[7][TOP]
>UniRef100_A7HI44 LigA n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HI44_ANADF
Length = 535
Score = 54.7 bits (130), Expect = 3e-06
Identities = 46/127 (36%), Positives = 51/127 (40%), Gaps = 15/127 (11%)
Frame = -3
Query: 461 ARPAAQRGPSRHRRRPRRTRRRHHRGAPRTAPTPCGGWGRGALGRTPPRSHGPPSRPGSR 282
+R A R P R RR P R R R RGA P G GRGA GR R P R G
Sbjct: 3 SRAGADRHPERDRRAPGRRRHRRGRGAAPRGGGPAGPAGRGAAGRLGRRRRRPAGRGGGD 62
Query: 281 RRSCP----*APSPG-----------RPGWLPAGRRGGRCRWQWRRQPGWRQAYPPGGRH 147
RR+ P A + G RP PAG G R G R+ PGG
Sbjct: 63 RRARPPRARRAAAAGGAPRAAAADRLRPARRPAGPDGA------ARHAGARRGPRPGGGG 116
Query: 146 QRAGRPR 126
+RA R
Sbjct: 117 RRAAGRR 123
[8][TOP]
>UniRef100_Q1DG75 Putative uncharacterized protein n=1 Tax=Myxococcus xanthus DK 1622
RepID=Q1DG75_MYXXD
Length = 513
Score = 53.5 bits (127), Expect = 7e-06
Identities = 44/120 (36%), Positives = 53/120 (44%), Gaps = 4/120 (3%)
Frame = -3
Query: 476 RGTPTARPAAQRGPSRHRRRPRRTRRRHHRGAPRTAPTPCGGWGRGALGRTPPRSHGPPS 297
RG P AR A +R P+ HRR P R R R AP P P G +G +G PP + P
Sbjct: 40 RGAP-ARHAPRRSPA-HRRTPDRGPRHARRPAPVRGPRPVAGTKQGGVGSLPPPASRPAR 97
Query: 296 RPGSRRRSCP*APSPGRPGWLPAGRRGGRCRWQWRRQPGWRQAYPPGGRH----QRAGRP 129
RRR+ P P P R G P R R R R+ A+ RH +R G P
Sbjct: 98 PAAPRRRARPACP-PVRTG--PRSPRVSRSRAAGGRRASGSAAFACAPRHRACLERHGSP 154
[9][TOP]
>UniRef100_C4REF4 Putative uncharacterized protein n=1 Tax=Micromonospora sp. ATCC
39149 RepID=C4REF4_9ACTO
Length = 341
Score = 53.1 bits (126), Expect = 9e-06
Identities = 49/125 (39%), Positives = 52/125 (41%), Gaps = 12/125 (9%)
Frame = -3
Query: 464 TARPAAQRGPSRHRRRPRRTRR------RHHRGAPRTAPTPCGGWGRGALGRTPPRSHGP 303
TA P + R P PR RR RG RT GW R + GR PPR
Sbjct: 62 TAWPGSARLPPTGTTSPRPGRRWPGGPTGRRRGGARTGR----GWPRRSPGRRPPRR--- 114
Query: 302 PSRPGSRRRSCP*APSPGRPGWLPAGRRGGR--CRWQWRRQP----GWRQAYPPGGRHQR 141
PSR GSR S P PGWLP R GR RW R P R+A R QR
Sbjct: 115 PSRSGSRASSPP-------PGWLPGTTRCGRPPSRWSAPRPPYRRLVERRAQAAELREQR 167
Query: 140 AGRPR 126
AG R
Sbjct: 168 AGHER 172