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[1][TOP]
>UniRef100_Q7XYZ2 Light-harvesting complex I polypeptide (Fragment) n=1
Tax=Griffithsia japonica RepID=Q7XYZ2_GRIJA
Length = 168
Score = 146 bits (368), Expect = 1e-33
Identities = 72/121 (59%), Positives = 87/121 (71%)
Frame = +3
Query: 180 MKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLV 359
M AS+++PFLE P KLD T+ G GFDPLYLS+Y+D DYAA E+K+GR+ MLA LG LV
Sbjct: 3 MAASESVPFLEKPSKLDGTRVGDTGFDPLYLSDYIDLDYAAAAEIKHGRICMLATLGMLV 62
Query: 360 AEVVHLPNKQFSNPVALDAIYQVPVAGWVQILIAISVVELATFKMVYDPKRAAXQLGFDP 539
EVVHLPN FS P L AIY VP+ GWVQI+ I +VELA+FK Y+ LGFDP
Sbjct: 63 QEVVHLPNAAFSEPNPLKAIYAVPIEGWVQIITVICLVELASFKATYE---TGADLGFDP 119
Query: 540 L 542
+
Sbjct: 120 M 120
[2][TOP]
>UniRef100_Q7XY90 Light-harvest protein n=1 Tax=Griffithsia japonica
RepID=Q7XY90_GRIJA
Length = 213
Score = 124 bits (310), Expect = 6e-27
Identities = 69/165 (41%), Positives = 99/165 (60%), Gaps = 8/165 (4%)
Frame = +3
Query: 81 MYAFVAATPVMSRSAFAGSAVSRAP-APVASTMTM-KASKAIPFLEAPEKLDETKAGYAG 254
M AFV P++SRS+ G+++S AP A +T++M + S ++PFL+ PE L +T GY G
Sbjct: 1 MNAFVPTLPLLSRSSLGGASLSVAPRASAPATVSMSERSASVPFLKKPENLPDTLIGYTG 60
Query: 255 FDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFSNPVALDAIYQVPV 434
FDPL + +D + + E+K+GRV+MLA LG LV E +HLP K F NP+A +A +QVP
Sbjct: 61 FDPLNFTGRVDYRWMQEAEIKHGRVSMLAVLGMLVQEFIHLPAKGFENPLATEAFFQVPS 120
Query: 435 AGWVQILIAISVVELATFKMVYDPK------RAAXQLGFDPLKMD 551
AG QI + EL K P +LGF+P+ +D
Sbjct: 121 AGLFQIFLFCGFAELYLHKGKLSPSDMFSDGATPGELGFNPMNLD 165
[3][TOP]
>UniRef100_P93450 Light-harvesting complex I polypeptide n=1 Tax=Porphyridium
purpureum RepID=P93450_PORCR
Length = 203
Score = 123 bits (309), Expect = 8e-27
Identities = 79/157 (50%), Positives = 91/157 (57%), Gaps = 3/157 (1%)
Frame = +3
Query: 81 MYAFVAATPVMSRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGFD 260
M AFV+ + SA S S+ A M SKAIPFLEAP KLD T G GFD
Sbjct: 1 MAAFVSGFGLARASAGRSSVCSKN----AHVTMMAKSKAIPFLEAPAKLDGTLVGDVGFD 56
Query: 261 PLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQ---FSNPVALDAIYQVP 431
PL LS LD Y ELK+GR+AMLA LG++V E+ L KQ F+ P AIY+VP
Sbjct: 57 PLGLSATLDVKYLRAAELKHGRIAMLAALGFVVQEI--LAPKQSGPFTEPDPFLAIYKVP 114
Query: 432 VAGWVQILIAISVVELATFKMVYDPKRAAXQLGFDPL 542
V GW QI+ AIS+VEL TFK YD GFDPL
Sbjct: 115 VEGWYQIIAAISLVELVTFKENYDGSAEPGNFGFDPL 151
[4][TOP]
>UniRef100_Q7X8N6 Light-harvest protein n=1 Tax=Griffithsia japonica
RepID=Q7X8N6_GRIJA
Length = 217
Score = 117 bits (294), Expect = 4e-25
Identities = 65/159 (40%), Positives = 93/159 (58%), Gaps = 7/159 (4%)
Frame = +3
Query: 93 VAATPVMSRSAFAGSAVSRAPAPVASTMTMK-ASKAIPFLEAPEKLDETKAGYAGFDPLY 269
+AA P +SRSA G+AVS A AP S ++M S ++PFL P+ L E GY GFDPL
Sbjct: 10 LAARPTLSRSALCGAAVSAAVAPAPSAVSMSDLSPSVPFLPKPKNLSEDMVGYTGFDPLG 69
Query: 270 LSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFSNPVALDAIYQVPVAGWVQ 449
LSN +D + + E+K+GRV MLA G L E VHLP+ +++NP+A +A+ QVP A Q
Sbjct: 70 LSNLVDIKWLQESEIKHGRVCMLAVAGILAQEFVHLPDPRYANPLATEALNQVPSAALWQ 129
Query: 450 ILIAISVVELATFK------MVYDPKRAAXQLGFDPLKM 548
I + + E K ++ +LGF+P+ +
Sbjct: 130 IFLFCGLAEFVLHKGKISYVDMFSDGAVPGELGFNPMNL 168
[5][TOP]
>UniRef100_Q9FDZ6 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q9FDZ6_GALSU
Length = 229
Score = 115 bits (288), Expect = 2e-24
Identities = 60/125 (48%), Positives = 78/125 (62%), Gaps = 7/125 (5%)
Frame = +3
Query: 189 SKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEV 368
S ++PFLE P+ LD T G GFDPLY+S+ LD + + E+K+GR+AMLA LG++V E
Sbjct: 48 SPSVPFLERPQNLDGTAPGDVGFDPLYISDLLDIQWLRESEIKHGRIAMLAALGFIVQEF 107
Query: 369 VHLPNKQFSNPVALDAIYQVPVAGWVQILIAISVVELATFK-------MVYDPKRAAXQL 527
VHLP + FSN VA+DA +QVP G QI + I ++E K M DP R
Sbjct: 108 VHLPGQVFSNKVAVDAFFQVPRGGLWQIFLFIGLLEFVMNKGKMTPLDMFSDPNRKPGDF 167
Query: 528 GFDPL 542
GFDPL
Sbjct: 168 GFDPL 172
[6][TOP]
>UniRef100_Q9FEM1 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q9FEM1_GALSU
Length = 227
Score = 114 bits (286), Expect = 4e-24
Identities = 59/129 (45%), Positives = 82/129 (63%), Gaps = 3/129 (2%)
Frame = +3
Query: 165 ASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLAC 344
+S+ + + S+AIPFL+AP LD + G GFDPL S+ +D Y + ELK+ R+AMLA
Sbjct: 47 SSSTSGRQSRAIPFLKAPPSLDGSMVGDVGFDPLGFSSIIDLRYLRESELKHCRIAMLAV 106
Query: 345 LGWLVAEVVHLPNKQFSNPVALDAIYQVPVAGWVQILIAISVVE---LATFKMVYDPKRA 515
+G++V E +HLP FSNP + AI QVPVAGWVQI + ++++E +A K R
Sbjct: 107 VGFIVQEFIHLPGDVFSNPHPMQAIGQVPVAGWVQIFLLVAILEMIDIAAIKETLQGNRE 166
Query: 516 AXQLGFDPL 542
GFDPL
Sbjct: 167 PGYFGFDPL 175
[7][TOP]
>UniRef100_Q7XY92 Light-harvest protein (Fragment) n=1 Tax=Griffithsia japonica
RepID=Q7XY92_GRIJA
Length = 206
Score = 114 bits (285), Expect = 5e-24
Identities = 66/148 (44%), Positives = 90/148 (60%), Gaps = 5/148 (3%)
Frame = +3
Query: 111 MSRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQ 290
++R+AFAG+AVSRA AP + +M AS ++PFLE P KLD + G GFDP SN +
Sbjct: 4 IARTAFAGAAVSRAAAPAKARFSMDASASVPFLERPPKLDGSLPGDVGFDPCGFSNAFEL 63
Query: 291 DYAAQGELKNGRVAMLACLGWLVAEVV-HLPNKQFSNPVALDAIYQVPVAGW---VQILI 458
++ + ELK+GR+ MLA LGW+ E+V HLPN+ +S A + +Y V GW +QIL
Sbjct: 64 NFLREAELKHGRICMLAILGWVFPELVGHLPNEAYS---ATNPLYAVGSVGWLPIIQILA 120
Query: 459 AISVVELATFKMVYDPKRA-AXQLGFDP 539
I++ E VYD A GFDP
Sbjct: 121 FIAICEAKGVAKVYDENCANPGNYGFDP 148
[8][TOP]
>UniRef100_A8KCN9 Light harvesting complex protein 3 n=1 Tax=Guillardia theta
RepID=A8KCN9_GUITH
Length = 218
Score = 114 bits (285), Expect = 5e-24
Identities = 62/158 (39%), Positives = 91/158 (57%)
Frame = +3
Query: 75 VIMYAFVAATPVMSRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAG 254
V++ A + + +A +A SRA M + S+AIPFLE P+KLD + GYAG
Sbjct: 5 VLLLAAAGVSAAFAPAALPVNAGSRAAIARGPRM-QQMSEAIPFLEKPKKLDSSMPGYAG 63
Query: 255 FDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFSNPVALDAIYQVPV 434
FDPL S+Y D + + E+K+GR+ MLA +G E+ LP + L+A YQ+
Sbjct: 64 FDPLGFSDYYDVKWLQEAEIKHGRICMLAVVGMFHPEIAKLPQFASFSTNPLEAFYQLSF 123
Query: 435 AGWVQILIAISVVELATFKMVYDPKRAAXQLGFDPLKM 548
AGW+QI + I + E +F+ VY +A LGFDPL++
Sbjct: 124 AGWLQIFVFIGICESFSFEKVYYTDKAPGDLGFDPLRL 161
[9][TOP]
>UniRef100_Q5K269 Light harvesting protein 7 (Fragment) n=1 Tax=Guillardia theta
RepID=Q5K269_GUITH
Length = 203
Score = 113 bits (283), Expect = 8e-24
Identities = 62/151 (41%), Positives = 90/151 (59%)
Frame = +3
Query: 96 AATPVMSRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLS 275
AA PV +A + +A++R P + S+AIPFLE P+KLD + GYAGFDPL S
Sbjct: 5 AALPV---NAGSRAAIARGPR------MQQMSEAIPFLEKPKKLDSSMPGYAGFDPLGFS 55
Query: 276 NYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFSNPVALDAIYQVPVAGWVQIL 455
+Y D + + E+K+GR+ MLA +G E+ LP + L+A YQ+ AGW+QI
Sbjct: 56 DYYDVKWLQEAEIKHGRICMLAVVGMFHPEIAKLPQFASFSTNPLEAFYQLSFAGWLQIF 115
Query: 456 IAISVVELATFKMVYDPKRAAXQLGFDPLKM 548
+ I + E +F+ VY +A LGFDPL++
Sbjct: 116 VFIGICESFSFEKVYYTDKAPGDLGFDPLRL 146
[10][TOP]
>UniRef100_A8KCP1 Light harvesting complex protein 4 (Fragment) n=1 Tax=Guillardia
theta RepID=A8KCP1_GUITH
Length = 232
Score = 111 bits (278), Expect = 3e-23
Identities = 65/160 (40%), Positives = 88/160 (55%), Gaps = 9/160 (5%)
Frame = +3
Query: 96 AATPVMSRSAFAGSAVSRAPAPVASTMTMKA--SKAIPFLEAPEKLDETKAGYAGFDPLY 269
A P SA + + + + S ++ +A SKA+PFL PEKLD + G GFDPL
Sbjct: 8 AFAPSFGTSAVSSRSNAITGMKMQSVLSNRAGKSKAMPFLSQPEKLDGSMPGDVGFDPLG 67
Query: 270 LSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFSNPVALDAIYQVPVAGWVQ 449
+S Y D + + ELK+GR+ MLA G LV EV+HLP + FS +ALDA P G +
Sbjct: 68 ISTYFDLKWMREAELKHGRICMLAWTGCLVQEVIHLPGEAFSKKLALDAWASAPRGGMIS 127
Query: 450 ILIAISVVE-------LATFKMVYDPKRAAXQLGFDPLKM 548
IL+AI ++E L M +P R LGFDPL +
Sbjct: 128 ILVAIGLIEMISNRFQLTATDMFANPARVPGDLGFDPLSL 167
[11][TOP]
>UniRef100_Q9FEM0 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q9FEM0_GALSU
Length = 219
Score = 110 bits (274), Expect = 9e-23
Identities = 56/126 (44%), Positives = 79/126 (62%), Gaps = 1/126 (0%)
Frame = +3
Query: 168 STMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLACL 347
S T + SKAIPF PE+LDE+ GYAGFDPL S+ D + + E+K+ R+ MLA L
Sbjct: 37 SAETQRMSKAIPFFPKPERLDESMPGYAGFDPLGFSDKFDVKFLQEAEIKHCRICMLAAL 96
Query: 348 GWLVAEVVHLPNKQFSNPVALDAIYQVPVAGWVQILIAISVVE-LATFKMVYDPKRAAXQ 524
GW+ E HLP++ FSN L A+ QVP G +QIL+ + +E ++ K+ + P++
Sbjct: 97 GWVFPEFWHLPSEVFSNTSPLAALGQVPKFGLIQILLLVVALEAISLDKLEFHPEKEPGD 156
Query: 525 LGFDPL 542
GFDPL
Sbjct: 157 FGFDPL 162
[12][TOP]
>UniRef100_Q5K281 Light harvesting complex protein (Fragment) n=1 Tax=Guillardia
theta RepID=Q5K281_GUITH
Length = 235
Score = 106 bits (265), Expect = 1e-21
Identities = 63/160 (39%), Positives = 86/160 (53%), Gaps = 9/160 (5%)
Frame = +3
Query: 96 AATPVMSRSAFAGSAVSRAPAPVASTMTMKA--SKAIPFLEAPEKLDETKAGYAGFDPLY 269
A P SA + + + + S ++ +A SKA+PFL PEKLD + G GFDPL
Sbjct: 11 AFAPSFGTSAVSSRSNAITGMKMQSVLSNRAGKSKAMPFLSQPEKLDGSMPGDVGFDPLG 70
Query: 270 LSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFSNPVALDAIYQVPVAGWVQ 449
+S Y D + + ELK+GR+ MLA G LV EV+HLP + +ALDA P G +
Sbjct: 71 ISTYFDLKWMREAELKHGRICMLAWTGCLVQEVIHLPESAEAKKLALDAWASAPRGGMIS 130
Query: 450 ILIAISVVE-------LATFKMVYDPKRAAXQLGFDPLKM 548
IL+AI ++E L M +P R LGFDPL +
Sbjct: 131 ILVAIGLIEMISNRFQLTATDMFANPARVPGDLGFDPLSL 170
[13][TOP]
>UniRef100_A8KCR3 Light harvesting complex protein 9 n=1 Tax=Guillardia theta
RepID=A8KCR3_GUITH
Length = 220
Score = 100 bits (248), Expect = 9e-20
Identities = 67/165 (40%), Positives = 86/165 (52%), Gaps = 10/165 (6%)
Frame = +3
Query: 78 IMYAFVAATPVMSRSAFAG---SAVSRAPAPVASTMTMKA-SKAIPFLEAPEKLDETKAG 245
++ A +A + SAFA SA RA S M M+ S+++PFL P LD G
Sbjct: 1 MLRAVIAFAACAAASAFAPTLPSAGVRAKTSAVSGMKMQQMSQSVPFLPRPAALDGKMVG 60
Query: 246 YAGFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFSNPVALDAIYQ 425
GFDP S+ D + + ELK+GRV MLA LG++V E VHLP + SNPV +A YQ
Sbjct: 61 DVGFDPFGFSSKYDIKWLRESELKHGRVCMLASLGYIVQEFVHLPFEATSNPVGSEAFYQ 120
Query: 426 VPVAGWVQILIAISVVE--LATFKM----VYDPKRAAXQLGFDPL 542
VP G QI I +E FKM ++ R GFDPL
Sbjct: 121 VPAGGLWQIFAFIGAIEHFSHNFKMSGSTMFSDGRTPGNFGFDPL 165
[14][TOP]
>UniRef100_A8KCN4 Light harvesting complex protein 2 n=1 Tax=Guillardia theta
RepID=A8KCN4_GUITH
Length = 215
Score = 97.8 bits (242), Expect = 5e-19
Identities = 63/166 (37%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Frame = +3
Query: 78 IMYAFVAATPVMSRSAFAGSAVSRAPAPVASTMTMKA---SKAIPFLEAPEKLDETKAGY 248
++ A + S SAFA +A+ A +ST +K S A+PFL P LD T AG
Sbjct: 1 MLRAILVLAAAASASAFAPAALPTRAAR-SSTQGLKMQDRSYAVPFLSRPPALDGTMAGD 59
Query: 249 AGFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFSNPVALDAIYQV 428
GFDPL SNY D + + ELK+GRV ML LG+LV E LP F + ++A + V
Sbjct: 60 VGFDPLGFSNYFDLKWLREAELKHGRVCMLGTLGFLVQEKFQLPLPGFGEKLPIEAFFTV 119
Query: 429 PVAGWVQILIAISVVELATFKMVYDP------KRAAXQLGFDPLKM 548
P G QI + +E+ + P RA LGFDPL +
Sbjct: 120 PTGGLWQIFFTLGAIEILSNNGRISPGDMFADGRAPGDLGFDPLNL 165
[15][TOP]
>UniRef100_B7FSP4 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7FSP4_PHATR
Length = 199
Score = 93.2 bits (230), Expect = 1e-17
Identities = 60/155 (38%), Positives = 86/155 (55%), Gaps = 2/155 (1%)
Frame = +3
Query: 78 IMYAFVAATPVMSRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGF 257
+M + + A + S +AFA +++ A S + SK+IPFL P+KLD + AG GF
Sbjct: 1 MMRSTILAALLASAAAFAPASMQSQRAGSVSLNAEEMSKSIPFLVKPDKLDGSMAGDMGF 60
Query: 258 DPLYLSN-YLDQDYAAQGELKNGRVAMLACLGWLVAEV-VHLPNKQFSNPVALDAIYQVP 431
DP+ LS+ D YA E+K+GR+ MLA +G LV + +HLP +QF+N A+ V
Sbjct: 61 DPMRLSDIQTDLKYARWSEIKHGRICMLAIVGILVQQAGIHLPGEQFTNTDIFGAVDSVG 120
Query: 432 VAGWVQILIAISVVELATFKMVYDPKRAAXQLGFD 536
+QI I VE+ATF Y + LGFD
Sbjct: 121 FGANMQIFAGIGAVEIATFNKHYG-EGEPGDLGFD 154
[16][TOP]
>UniRef100_Q9FEL9 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q9FEL9_GALSU
Length = 220
Score = 91.7 bits (226), Expect = 3e-17
Identities = 54/131 (41%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Frame = +3
Query: 165 ASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLAC 344
AS + SKAIPFL+ P LD + G GFDPL +S+YLD + + ELK+ R+AMLA
Sbjct: 38 ASASLPQKSKAIPFLDRPPALDGSMVGDVGFDPLNISSYLDLRWLRESELKHCRIAMLAV 97
Query: 345 LGWLVAEVVHLPNKQFSNPVALDAIYQVPVAGWV-QILIAISVVEL----ATFKMVYDPK 509
+GW V EV HLPN+ +S +A ++ G + QI++ S E+ A +M+
Sbjct: 98 VGWFVQEVFHLPNQIYSASDPTEAFWKTLATGPMGQIVLWTSFFEIISTPAVIQMLQGSG 157
Query: 510 RAAXQLGFDPL 542
R GFDPL
Sbjct: 158 REPGYFGFDPL 168
[17][TOP]
>UniRef100_Q8RW55 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q8RW55_GALSU
Length = 220
Score = 90.9 bits (224), Expect = 6e-17
Identities = 54/131 (41%), Positives = 74/131 (56%), Gaps = 5/131 (3%)
Frame = +3
Query: 165 ASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLAC 344
AS + SKAIPFL+ P LD + G GFDPL +S+YLD + + ELK+ R+AMLA
Sbjct: 38 ASASLPQKSKAIPFLDRPPALDGSMVGDVGFDPLNISSYLDLRWLRESELKHCRIAMLAV 97
Query: 345 LGWLVAEVVHLPNKQFSNPVALDAIYQVPVAGWV-QILIAISVVEL----ATFKMVYDPK 509
+GW V EV HLPN +S +A ++ G + QI++ S E+ A +M+
Sbjct: 98 VGWFVQEVFHLPNXIYSASDPTEAFWKTLATGPMGQIVLWTSFFEIISTPAVIQMLQGSG 157
Query: 510 RAAXQLGFDPL 542
R GFDPL
Sbjct: 158 REPGYFGFDPL 168
[18][TOP]
>UniRef100_P93449 Light-harvesting complex I polypeptide n=1 Tax=Porphyridium
purpureum RepID=P93449_PORCR
Length = 222
Score = 88.6 bits (218), Expect = 3e-16
Identities = 57/156 (36%), Positives = 83/156 (53%), Gaps = 8/156 (5%)
Frame = +3
Query: 99 ATPVMSRSAFAGSAVSRAPAPVASTMTMKA--SKAIPFLEAPEKLDETKAGYAGFDPLYL 272
A PV +A +V A A + M A SK+IPFLE P+ LD + AG GFDPL
Sbjct: 12 AGPVDKVAAIQSKSVKAAVPVKAGRIAMMAEMSKSIPFLEKPKNLDGSMAGDVGFDPLGF 71
Query: 273 SNYLDQDYAAQGELKNGRVAMLACLGWLVAEV-----VHLPNKQFSNPVALDAIYQVPVA 437
S+ D + + ELK+GR+ MLA LG++ E+ + P F+ L A+ +P A
Sbjct: 72 SDKWDVKFLREAELKHGRICMLAALGFIYPEIMGGKSIPSPEGYFTELNPLKAVKAIPTA 131
Query: 438 GWVQILIAISVVELATFKMVY-DPKRAAXQLGFDPL 542
G +QI++ + V+E ++ V+ D A FDPL
Sbjct: 132 GLLQIVLFVMVLEAISWNKVFMDKTSAPGDFKFDPL 167
[19][TOP]
>UniRef100_Q2IA66 Chloroplast light harvesting protein isoform 13 n=1 Tax=Isochrysis
galbana RepID=Q2IA66_ISOGA
Length = 211
Score = 85.9 bits (211), Expect = 2e-15
Identities = 53/126 (42%), Positives = 66/126 (52%), Gaps = 8/126 (6%)
Frame = +3
Query: 189 SKAIPFLEAPEKLDETKAGY-AGFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAE 365
SKA+PFL AP AG GFDPLYLS Y+D +A + ELK+GR+ MLA G+ E
Sbjct: 36 SKAVPFLSAPPCQSSKLAGAETGFDPLYLSEYIDIKWAREAELKHGRICMLAATGYFFQE 95
Query: 366 VVHLPNKQFSNPVALDAIYQVPVAGWVQILIAISVVEL-------ATFKMVYDPKRAAXQ 524
+ LP P ++A V QI++ +SVVE M DPKR
Sbjct: 96 FLALPGFPGYTPNGIEAATSVSPESLAQIVLFMSVVEYNSNLNKWTQDTMFTDPKREPGN 155
Query: 525 LGFDPL 542
LGFDPL
Sbjct: 156 LGFDPL 161
[20][TOP]
>UniRef100_B8C2K6 Fucoxanthin chl a/c light-harvesting protein n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8C2K6_THAPS
Length = 198
Score = 85.5 bits (210), Expect = 2e-15
Identities = 58/144 (40%), Positives = 83/144 (57%), Gaps = 3/144 (2%)
Frame = +3
Query: 78 IMYAFVAATPVMSRSAFAGSAVSRAPAPVASTMTM-KASKAIPFLEAPEKLDETKAGYAG 254
++ A + + + + SAFA ++V R ST+ + + SK+IPFL PEKLD + AG G
Sbjct: 1 MLKAVLTTSLIAAASAFAPASVGR------STVALNEMSKSIPFLTVPEKLDGSMAGDVG 54
Query: 255 FDPLYLSN-YLDQDYAAQGELKNGRVAMLACLGWLVAEV-VHLPNKQFSNPVALDAIYQV 428
FDP+ LS+ D +YA ELK+GR+ MLA +G + E HLP ++ +AI V
Sbjct: 55 FDPMGLSDIQTDLNYARWAELKHGRICMLAVVGMVWQEYGPHLPGDAYATKDPWEAISSV 114
Query: 429 PVAGWVQILIAISVVELATFKMVY 500
A Q L+AI VVELA + Y
Sbjct: 115 GFASNFQTLLAIGVVELANWNKYY 138
[21][TOP]
>UniRef100_Q9XG28 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q9XG28_GALSU
Length = 302
Score = 77.4 bits (189), Expect = 6e-13
Identities = 48/125 (38%), Positives = 68/125 (54%), Gaps = 5/125 (4%)
Frame = +3
Query: 183 KASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVA 362
K SKA+PF+ P+ LD T AG GFDPL +N D + + ELK+ R+AMLA LG++V
Sbjct: 126 KWSKALPFMLWPKNLDGTMAGDVGFDPLGFTNVFDVKWMREAELKHCRIAMLAALGFMVQ 185
Query: 363 EVVHLPNKQFSN--PVALDAIYQVPVAGWVQILIAI---SVVELATFKMVYDPKRAAXQL 527
E+ P+ FS PV +Y V G QIL+ + ++ + + + KR
Sbjct: 186 ELWTFPHPYFSKVPPVLAHDVY-VKTGGMSQILLFVIFFEIISVFAVSQMMEGKREPGVF 244
Query: 528 GFDPL 542
FDPL
Sbjct: 245 HFDPL 249
[22][TOP]
>UniRef100_Q9M441 Light-harvesting protein n=1 Tax=Galdieria sulphuraria
RepID=Q9M441_GALSU
Length = 302
Score = 77.4 bits (189), Expect = 6e-13
Identities = 48/125 (38%), Positives = 68/125 (54%), Gaps = 5/125 (4%)
Frame = +3
Query: 183 KASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVA 362
K SKA+PF+ P+ LD T AG GFDPL +N D + + ELK+ R+AMLA LG++V
Sbjct: 126 KWSKALPFMLWPKNLDGTMAGDVGFDPLGFTNVFDVKWMREAELKHCRIAMLAALGFMVQ 185
Query: 363 EVVHLPNKQFSN--PVALDAIYQVPVAGWVQILIAI---SVVELATFKMVYDPKRAAXQL 527
E+ P+ FS PV +Y V G QIL+ + ++ + + + KR
Sbjct: 186 ELWTFPHPYFSKVPPVLAHDVY-VKTGGMSQILLFVIFFEIISVFAVSQMMEGKREPGVF 244
Query: 528 GFDPL 542
FDPL
Sbjct: 245 HFDPL 249
[23][TOP]
>UniRef100_A8KCQ1 Light harvesting complex protein 6 n=1 Tax=Guillardia theta
RepID=A8KCQ1_GUITH
Length = 218
Score = 77.0 bits (188), Expect = 8e-13
Identities = 62/164 (37%), Positives = 86/164 (52%), Gaps = 8/164 (4%)
Frame = +3
Query: 75 VIMYAFVAATPVMSRSA-FAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYA 251
+++ A VAA S SA + SR A V M SK+IPFL+ P LD T AG
Sbjct: 5 ILVAACVAAATAFSPSAPLTRPSSSRNVAAVGPRM-QAMSKSIPFLKKPAALDGTLAGDV 63
Query: 252 GFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPN-KQFSNPVALDAIYQV 428
GFDPL LS+ D + A+ ELK+ R+AMLA LG +V ++ P + + ++ +
Sbjct: 64 GFDPLGLSSVADVRFLAEAELKHCRLAMLAALGAIVQDIFTFPGVSKVVGSEKMTGVHDI 123
Query: 429 PV--AGWVQILIAISVVE----LATFKMVYDPKRAAXQLGFDPL 542
V QIL+ +S +E LA F+ + D KRA FDPL
Sbjct: 124 LVKQGAMGQILLWVSFLEVFGTLALFETL-DGKRAPGDFKFDPL 166
[24][TOP]
>UniRef100_O81932 Fucoxanthin chlorophyll a/c protein (Fragment) n=1 Tax=Cyclotella
cryptica RepID=O81932_9STRA
Length = 164
Score = 75.1 bits (183), Expect = 3e-12
Identities = 46/104 (44%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Frame = +3
Query: 195 AIPFLEAPEKLDETKAGYAGFDPLYLSN-YLDQDYAAQGELKNGRVAMLACLGWLVAEV- 368
+IPFL PEKLD + G GFDP+ LS+ D +YA ELK+GR+ MLA +G + E
Sbjct: 1 SIPFLTVPEKLDGSMPGDMGFDPMGLSDIQTDLNYARWSELKHGRICMLAVVGMVWQEYG 60
Query: 369 VHLPNKQFSNPVALDAIYQVPVAGWVQILIAISVVELATFKMVY 500
HLP ++ +AI V A +Q L+AI VVELA + Y
Sbjct: 61 PHLPGDAYATRDPWEAISSVGFASNIQTLLAIGVVELANWNKYY 104
[25][TOP]
>UniRef100_Q5K286 Light harvesting protein 2 (Fragment) n=1 Tax=Guillardia theta
RepID=Q5K286_GUITH
Length = 244
Score = 74.7 bits (182), Expect = 4e-12
Identities = 55/158 (34%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Frame = +3
Query: 114 SRSAFAGSAVSRAPAPVASTMTMKA-----------SKAIPFLEAPEKLDETKAGYAGFD 260
S +AFA + R AP AS + S+++PFL+ P LD + G GFD
Sbjct: 5 SAAAFAPAPAGRLSAPAASRAAISRGPRMAVFEGSFSESVPFLKQPTNLDGSLPGDVGFD 64
Query: 261 PLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFSNPVALDAIYQVPVAG 440
PL S D + ELK+GR+AMLA LGWLV E P +P+ + V G
Sbjct: 65 PLGFSEVFDVKVLREAELKHGRIAMLAVLGWLVQESYTFPFFDKVSPIEAHDLL-VKSGG 123
Query: 441 WVQILIAISVVE----LATFKMVYDPKRAAXQLGFDPL 542
QIL+ S +E +A F+ + R FDPL
Sbjct: 124 MSQILLWTSFLEIFGGIALFQTI-QGTRYPGDFSFDPL 160
[26][TOP]
>UniRef100_A8KCP5 Light harvesting complex protein 5 n=1 Tax=Guillardia theta
RepID=A8KCP5_GUITH
Length = 235
Score = 74.7 bits (182), Expect = 4e-12
Identities = 55/158 (34%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Frame = +3
Query: 114 SRSAFAGSAVSRAPAPVASTMTMKA-----------SKAIPFLEAPEKLDETKAGYAGFD 260
S +AFA + R AP AS + S+++PFL+ P LD + G GFD
Sbjct: 13 SAAAFAPAPAGRLSAPAASRAAISRGPRMAVFEGSFSESVPFLKQPTNLDGSLPGDVGFD 72
Query: 261 PLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFSNPVALDAIYQVPVAG 440
PL S D + ELK+GR+AMLA LGWLV E P +P+ + V G
Sbjct: 73 PLGFSEVFDVKVLREAELKHGRIAMLAVLGWLVQESYTFPFFDKVSPIEAHDLL-VKSGG 131
Query: 441 WVQILIAISVVE----LATFKMVYDPKRAAXQLGFDPL 542
QIL+ S +E +A F+ + R FDPL
Sbjct: 132 MSQILLWTSFLEIFGGIALFQTI-QGTRYPGDFSFDPL 168
[27][TOP]
>UniRef100_Q5K258 Lhc7 protein (Fragment) n=1 Tax=Guillardia theta RepID=Q5K258_GUITH
Length = 176
Score = 72.4 bits (176), Expect = 2e-11
Identities = 50/125 (40%), Positives = 70/125 (56%), Gaps = 7/125 (5%)
Frame = +3
Query: 189 SKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEV 368
SK+IPFL+ P LD T AG GFDPL LS+ D + A+ ELK+ R+AMLA LG +V ++
Sbjct: 1 SKSIPFLKKPAALDGTLAGDVGFDPLGLSSVADVRFLAEAELKHCRLAMLAALGAIVQDI 60
Query: 369 VHLPN-KQFSNPVALDAIYQVPV--AGWVQILIAISVVE----LATFKMVYDPKRAAXQL 527
P + + ++ + V QIL+ +S +E LA F+ + D KRA
Sbjct: 61 FTFPGVSKVVGSEKMTGVHDILVKQGAMGQILLWVSFLEVFGTLALFETL-DGKRAPGDF 119
Query: 528 GFDPL 542
FDPL
Sbjct: 120 KFDPL 124
[28][TOP]
>UniRef100_A8KCR8 Light harvesting complex protein 10 n=1 Tax=Guillardia theta
RepID=A8KCR8_GUITH
Length = 257
Score = 71.2 bits (173), Expect = 5e-11
Identities = 59/176 (33%), Positives = 85/176 (48%), Gaps = 26/176 (14%)
Frame = +3
Query: 93 VAATPVMSRSAFAGSAVSRAPAPVAS----TMTMKA-SKAIPFLEAPEKLDETKAGYAGF 257
+AA+ V + + AG A+ A AP S +M+M+A SK +P+LEAP LD G GF
Sbjct: 7 IAASVVTATAFLAGPALPSAHAPARSNAISSMSMQARSKPLPWLEAPPALDGKMEGDVGF 66
Query: 258 DPLYLSNYLDQ----DYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQ-----FSNPVAL 410
DPL++S+ L + + ELK+GRVAMLA G +V ++ P A
Sbjct: 67 DPLWVSSMLPDAGWIKFLREAELKHGRVAMLAATGAIVQDIFTFPGVDKVIGAAKMTSAH 126
Query: 411 DAIYQVPVAG-----------WVQILIAISVVELA-TFKMVYDPKRAAXQLGFDPL 542
D + + G W+ +L +S + TFK + RA GFDPL
Sbjct: 127 DKYLSLEIGGSKVATMHQMLLWIGLLEILSAPAIVQTFK--GETSRAPGDFGFDPL 180
[29][TOP]
>UniRef100_Q4GWU4 Light-harvesting complex protein Lhcc5 n=1 Tax=Rhodomonas sp. CS24
RepID=Q4GWU4_RHDS2
Length = 255
Score = 70.5 bits (171), Expect = 8e-11
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 5/107 (4%)
Frame = +3
Query: 75 VIMYAFVAATPVMSRSAFAGSAVSRAPAPVASTMTM-KASKAIPFLEAPEKLDETKAGYA 251
V+ A VA+ + V+R A S+M M K S A+P+L+AP LDE+ GY
Sbjct: 5 VLFGAVVASASAFVAPVLPSAGVARTNANAMSSMRMQKKSAAMPWLDAPPALDESMTGYV 64
Query: 252 GFDPLYLSNYLDQ----DYAAQGELKNGRVAMLACLGWLVAEVVHLP 380
GFDPL++S+ L + + E+K+GRVAMLA G +V ++ P
Sbjct: 65 GFDPLWVSSMLPDPGYVKFLQEAEIKHGRVAMLAATGAIVQDIFTFP 111
[30][TOP]
>UniRef100_B7FQE0 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7FQE0_PHATR
Length = 202
Score = 70.5 bits (171), Expect = 8e-11
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 7/160 (4%)
Frame = +3
Query: 93 VAATPVMSRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYL 272
+ A+ + + +AFA ++ A VA + + S A+PFL PE L GFDPL
Sbjct: 5 ILASMLSAAAAFAPASQGAGKASVA--LNAEKSPAMPFLPYPENLKGYIGDDIGFDPLGF 62
Query: 273 SNYLDQDYAAQGELKNGRVAMLACLGWLVAE---VVHLPNKQFSNPVALDAIYQVPVAG- 440
S+Y DY + E+K+GR+ MLA +G++ + +VH ++ A DA+ + V G
Sbjct: 63 SDYFPMDYLRESEIKHGRICMLAVVGYIATDLGIIVHPYGSGLTSATAHDALLEKGVMGN 122
Query: 441 ---WVQILIAISVVELATFKMVYDPKRAAXQLGFDPLKMD 551
W+ L +S + AT +M+ R GF +D
Sbjct: 123 ALIWIGALEMVSYI--ATAEMLQGSGREPGYFGFGTKYLD 160
[31][TOP]
>UniRef100_A8KCQ6 Light harvesting complex protein 7 (Fragment) n=1 Tax=Guillardia
theta RepID=A8KCQ6_GUITH
Length = 198
Score = 70.1 bits (170), Expect = 1e-10
Identities = 48/122 (39%), Positives = 63/122 (51%), Gaps = 4/122 (3%)
Frame = +3
Query: 189 SKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEV 368
S A+PFL+ P LD + G GFDPL S+ D + ELK+GR AMLA LG++V E+
Sbjct: 27 SAAVPFLKRPSNLDGSYVGDVGFDPLGFSDVFDLRVLREAELKHGRFAMLAVLGFIVQEL 86
Query: 369 VHLPNKQFSNPVALDA-IYQVPVAGWVQILIAISVVELATFKMVYDP---KRAAXQLGFD 536
P F +DA Y V G QI+ IS VE+ +++ KR FD
Sbjct: 87 YTFP--FFPKMAPVDAHDYFVQQGGGSQIIFWISFVEIFGVVALFETLQGKREPGDFAFD 144
Query: 537 PL 542
PL
Sbjct: 145 PL 146
[32][TOP]
>UniRef100_A8KCR0 Light harvesting complex protein 8 (Fragment) n=1 Tax=Guillardia
theta RepID=A8KCR0_GUITH
Length = 222
Score = 69.7 bits (169), Expect = 1e-10
Identities = 54/169 (31%), Positives = 74/169 (43%), Gaps = 29/169 (17%)
Frame = +3
Query: 123 AFAGSAVSRAPAPVASTMTMKASKA---------------------IPFLEAPEKLDETK 239
A A SA + AP+PV +A+ A FLE P LD T
Sbjct: 8 ALAASAAAFAPSPVLPRAAQRAAAARNGPTMQLYKEGQLQGATVNLYSFLERPPALDGTW 67
Query: 240 AGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLP--NKQFSNPVALD 413
G GFDPL SN +D + + ELK+GRV MLA G +V +V P K F +
Sbjct: 68 VGDVGFDPLGFSNIIDMRWLREAELKHGRVCMLAATGMIVQDVYQFPGVTKTF-GAAKMT 126
Query: 414 AIYQVPV--AGWVQILIAISVVEL----ATFKMVYDPKRAAXQLGFDPL 542
A++ V Q+L+ + +E+ A +M+ R GFDPL
Sbjct: 127 ALHDAAVKQGAMQQLLLWLGFIEIFGFVAIVQMLQGSDRQPGDFGFDPL 175
[33][TOP]
>UniRef100_Q2IA65 Chloroplast light harvesting protein isoform 14 n=1 Tax=Isochrysis
galbana RepID=Q2IA65_ISOGA
Length = 193
Score = 67.8 bits (164), Expect = 5e-10
Identities = 52/140 (37%), Positives = 76/140 (54%), Gaps = 7/140 (5%)
Frame = +3
Query: 99 ATPVMSRSAFAGSA----VSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPL 266
A + S S AG A V R APV M S+A+PFLEAP KLD + AG GFDPL
Sbjct: 3 ALSLQSLSLNAGMAPAARVQRMQAPV-----MIKSQALPFLEAPAKLDGSMAGDRGFDPL 57
Query: 267 YLSNYLDQDYAAQGELKNGRVAMLACLGWL-VAEVVHLPNKQFSNPVALDAIYQVPVAGW 443
L+ + +Y + ELK+GR+ MLA +G++ V ++P F+ V+ A + V
Sbjct: 58 NLAGSFNLNYMREAELKHGRICMLAWVGYVAVDNGFYVP---FAPHVSSLAAHDTAVKSG 114
Query: 444 VQILI--AISVVELATFKMV 497
+L+ A+ V+E ++ V
Sbjct: 115 NMLLLLGAVGVIEALSYNAV 134
[34][TOP]
>UniRef100_B7G6N5 Protein fucoxanthin chlorophyll a/c protein (Fragment) n=1
Tax=Phaeodactylum tricornutum CCAP 1055/1
RepID=B7G6N5_PHATR
Length = 246
Score = 67.4 bits (163), Expect = 7e-10
Identities = 50/132 (37%), Positives = 67/132 (50%), Gaps = 14/132 (10%)
Frame = +3
Query: 189 SKAIPFLEAPEKLDETKAGYAGFDPL-YLSNYLDQDYAAQGELKNGRVAMLACLGWLVAE 365
S+AIPF + P LD T AG GFDP+ + S+ D + E+K+GR+AMLA GW+ AE
Sbjct: 59 SEAIPFQKRPHALDGTFAGDVGFDPIGFASSKEDLWKYREAEVKHGRLAMLASAGWIFAE 118
Query: 366 VVHLPNKQ-FSNPVALDA-----------IYQVPVAGWVQILIAISVVEL-ATFKMVYDP 506
P Q FS LDA + +V WV L+A + ++L K DP
Sbjct: 119 RFDRPLAQLFSMEPVLDASNRNPALLNGGLGKVSPVYWVSCLVAAAAIDLNGIEKSRNDP 178
Query: 507 KRAAXQLGFDPL 542
LG+DPL
Sbjct: 179 NYFPGNLGWDPL 190
[35][TOP]
>UniRef100_B7FUM6 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7FUM6_PHATR
Length = 200
Score = 67.0 bits (162), Expect = 9e-10
Identities = 52/159 (32%), Positives = 79/159 (49%), Gaps = 7/159 (4%)
Frame = +3
Query: 93 VAATPVMSRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYL 272
V A+ + S +AFA +A PA S + + SK++PFL AP+ G GFDPL
Sbjct: 5 VFASLLASAAAFAPAA---KPAASTSALNAEMSKSMPFLTAPKNTGGY-VGDVGFDPLGF 60
Query: 273 SNYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFSNPVALDAIYQVPVAGWVQI 452
S+ D + + E+K+GR AMLA +G+++ + LP + L A ++ +QI
Sbjct: 61 SDNFDMKWLRESEIKHGRAAMLATVGFVMQQFWTLPGMVHVDDSNL-APGAAGISPMLQI 119
Query: 453 LIAISVVELATFK-------MVYDPKRAAXQLGFDPLKM 548
+ + +E T K M D R LGFDP+ M
Sbjct: 120 VFGMGALEWWTNKGKVTMEDMFSDSSREPGNLGFDPMGM 158
[36][TOP]
>UniRef100_Q5K274 Light harvesting protein 6 (Fragment) n=1 Tax=Guillardia theta
RepID=Q5K274_GUITH
Length = 213
Score = 63.9 bits (154), Expect = 7e-09
Identities = 54/158 (34%), Positives = 78/158 (49%), Gaps = 22/158 (13%)
Frame = +3
Query: 135 SAVSRAPAPVASTMTMKA-SKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQ----DYA 299
SA + A + S+M+M+A SK +P+LEAP LD G GFDPL++S+ L +
Sbjct: 5 SAHAPARSNAISSMSMQARSKPLPWLEAPPALDGKMEGDVGFDPLWVSSMLPDAGWIKFL 64
Query: 300 AQGELKNGRVAMLACLGWLVAEVVHLPNKQ-----FSNPVALDAIYQVPVAG-----WVQ 449
+ ELK+GRVAMLA G +V ++ P A D + + G Q
Sbjct: 65 REAELKHGRVAMLAATGAIVQDIFTFPGVDKVIGAAKMTSAHDKYLSLEIGGSKVATMHQ 124
Query: 450 ILIAISVVEL-------ATFKMVYDPKRAAXQLGFDPL 542
+L+ I ++E+ TFK + RA GFDPL
Sbjct: 125 MLLWIGLLEILSDPAIVQTFK--GETSRAPGDFGFDPL 160
[37][TOP]
>UniRef100_B8C8Q0 Fucoxanthin chl a/c light-harvesting protein, lhcr type n=1
Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C8Q0_THAPS
Length = 204
Score = 63.5 bits (153), Expect = 1e-08
Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Frame = +3
Query: 123 AFAGSAVSRAPA---PVASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQD 293
A AGS+ + AP A+ + + SKA+PFL P D G GFDPL S+ D
Sbjct: 9 ALAGSSAAFAPVNNGKAATALNAEMSKAMPFLINPANTDGL-IGSNGFDPLGFSDTFDIK 67
Query: 294 YAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFSNPVALD---AIYQVPVAGWVQILIAI 464
+ + E+K+GRVAMLA G++ ++ V+ P +S+ D A V ++ +QI+ A
Sbjct: 68 WLQESEIKHGRVAMLASAGFIASQFVNFP--MYSSMHVDDSNMAPTVVGISAMLQIVCAA 125
Query: 465 SVVELATFKMVYDPK---------RAAXQLGFDPL 542
V E T+K + R GFDP+
Sbjct: 126 GVEEWRTYKGQVTMEDMFTGDMADRTPGDFGFDPM 160
[38][TOP]
>UniRef100_Q2IA67 Chloroplast light harvesting protein isoform 12 n=1 Tax=Isochrysis
galbana RepID=Q2IA67_ISOGA
Length = 231
Score = 63.2 bits (152), Expect = 1e-08
Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Frame = +3
Query: 144 SRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNG 323
+ APAP ++ S+++PFL + LD G GFDP+ S L D+ + ELK+
Sbjct: 53 AEAPAPPPPPPPVQYSQSMPFLVKRKTLDGY-VGDIGFDPVGFSEILPMDWLREAELKHC 111
Query: 324 RVAMLACLGWLVAEVVHLPNKQFSNPVALDAIYQVPVAGWVQILIAISVVELATF----K 491
RVAMLA +G++ + H+ F+ A DA V Q+L+ + ++E+ F +
Sbjct: 112 RVAMLATVGFVFTDFFHISGFDFTTLEAHDAC--VASGAMSQLLLWLGLLEVFGFIGIDQ 169
Query: 492 MVYDPKRAAXQLGFDPL 542
+ RAA FDPL
Sbjct: 170 TLRGSGRAAGDFSFDPL 186
[39][TOP]
>UniRef100_B7GCV9 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7GCV9_PHATR
Length = 232
Score = 63.2 bits (152), Expect = 1e-08
Identities = 48/133 (36%), Positives = 68/133 (51%), Gaps = 15/133 (11%)
Frame = +3
Query: 189 SKAIPFLEAPEKLDETKAGYAGFDPLYL--SNYLDQDYAAQGELKNGRVAMLACLGWLVA 362
S ++PF+ + LD + G AGFDPL+L S L +DY E+K+GR+AMLA LGW +
Sbjct: 46 SASVPFMPKNKLLDGSYPGDAGFDPLFLADSQALLEDYR-DAEIKHGRLAMLAALGWPAS 104
Query: 363 EV--------VHLP---NKQFSNPVALD-AIYQVPVAGWVQILIAISVVELATF-KMVYD 503
EV V +P ++ P L+ + ++PV W L S +E A K D
Sbjct: 105 EVWDRAIANAVSMPPVVDESLRAPSVLNGGLGKIPVEYWAASLFVASFIECANIQKRRTD 164
Query: 504 PKRAAXQLGFDPL 542
+ L FDPL
Sbjct: 165 DRWFPGNLNFDPL 177
[40][TOP]
>UniRef100_B7G502 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G502_PHATR
Length = 206
Score = 62.4 bits (150), Expect = 2e-08
Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 8/164 (4%)
Frame = +3
Query: 81 MYAFVAATPVMSRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGFD 260
M + + A+ + S +AFA ++ S + + + + E+ E + K G FD
Sbjct: 1 MKSIIFASLLTSAAAFAPASSSTTRTATPTALNEEFCRGYVGGESVEPMFIGKTGSKNFD 60
Query: 261 PLYLSNYLDQ--DYAAQGELKNGRVAMLACLGWLVAEVVHLPNKQFS---NPVALDAIYQ 425
PL L+ + + + + ELK+GR AMLA G++V E V +P + +S P +DA
Sbjct: 61 PLGLTEKVPEWVPWFRESELKHGRAAMLAVAGFVVPEFVRVPGEAYSFAAIPNVIDAHDA 120
Query: 426 VPVAGWVQILIAISVVELATFKMVYDPK---RAAXQLGFDPLKM 548
+P A +QI IS VE +F + + R GFDPLK+
Sbjct: 121 LPQA-MIQIFAWISFVEAVSFPALANMNEFDRVPGDFGFDPLKL 163
[41][TOP]
>UniRef100_Q5ENM0 Chloroplast light harvesting complex protein (Fragment) n=1
Tax=Heterocapsa triquetra RepID=Q5ENM0_HETTR
Length = 166
Score = 61.2 bits (147), Expect = 5e-08
Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Frame = +3
Query: 165 ASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLAC 344
A T + S A+PFL P L GFDPL +S+ L Y + ELK+GRV MLA
Sbjct: 45 AMDKTSEMSPAVPFLNYPVPLKGYVGDEKGFDPLGVSDALPVYYLRESELKHGRVCMLAT 104
Query: 345 LGWLVAEV-VHLPNKQFSNPVALDAIYQVPVAGWVQILIA 461
+GW+ ++ V P QF N + A ++ G +Q +A
Sbjct: 105 IGWMATDLGVRFPGDQFQNVSTVGAHDKMVELGLMQPFLA 144
[42][TOP]
>UniRef100_Q2IA64 Chloroplast light harvesting protein isoform 15 n=1 Tax=Isochrysis
galbana RepID=Q2IA64_ISOGA
Length = 199
Score = 61.2 bits (147), Expect = 5e-08
Identities = 49/139 (35%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Frame = +3
Query: 114 SRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQD 293
S AFA + ++RA AP+ S +S P+ + T G+ FDPL LS+ +D+D
Sbjct: 8 SVQAFAPTGLARAQAPMRSGALAMSS---PYENELGVIQPT--GF--FDPLNLSSDIDED 60
Query: 294 YAAQ---GELKNGRVAMLACLGWLVAEVVHLPNK-----QFSN-PVALDAIYQVPVAGWV 446
AQ ELK+GRVA LA +G++V E P + +F++ P + AI +P GW
Sbjct: 61 TFAQYRTAELKHGRVAQLAVIGYVVPEFYRFPGEIAPGIKFADVPNGVAAIDAIPTLGWA 120
Query: 447 QILIAISVVELATFKMVYD 503
QI+ I V+ F +D
Sbjct: 121 QIIFLIGAVDYWGFLGDFD 139
[43][TOP]
>UniRef100_B8CEQ3 Pt17531-like protein n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8CEQ3_THAPS
Length = 196
Score = 61.2 bits (147), Expect = 5e-08
Identities = 48/128 (37%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
Frame = +3
Query: 120 SAFAGSAVSRAPAPVASTMTMKAS----KAIPFLEAPEKLDETKAGYAGFDPLYLSNYLD 287
+ A SA + APA ++S T + S + + + AP G+ FDPL LS D
Sbjct: 7 ATLAASAAAFAPASISSPSTTQLSAWRDEVVVGITAP-------VGF--FDPLGLSKGKD 57
Query: 288 QD---YAAQGELKNGRVAMLACLGW-LVAEVVHLP-NKQFSNPVALDAIYQVPVAGWVQI 452
Y + ELKNGRVAM ACLGW L A VH N + SN L A+ ++P GW+Q
Sbjct: 58 DATMAYYREAELKNGRVAMAACLGWYLNAGGVHPAFNSELSND-PLKAMVELPAVGWLQF 116
Query: 453 LIAISVVE 476
++ +E
Sbjct: 117 VLGCGAIE 124
[44][TOP]
>UniRef100_B7FQE1 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7FQE1_PHATR
Length = 215
Score = 60.1 bits (144), Expect = 1e-07
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 10/128 (7%)
Frame = +3
Query: 186 ASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAE 365
AS+++PF+E P L + G AGFDP S++L D+ + ELK+GR+ M+A G+ +
Sbjct: 44 ASESLPFMEYPPNL-KGYVGDAGFDPFRFSDFLPMDFLREAELKHGRICMMATAGFAAVD 102
Query: 366 ----VVHLPN--KQFSNPVALDAIYQVPVAGWVQILIAISVVEL----ATFKMVYDPKRA 515
V LP + ++ A DA+ V G Q+L+ S +E+ A +M+ R
Sbjct: 103 LGLRVYPLPEGYEGLTSVTAHDAL--VKQGGMGQMLLWFSFLEIFDTVAVIQMLNGSGRR 160
Query: 516 AXQLGFDP 539
GFDP
Sbjct: 161 PGDFGFDP 168
[45][TOP]
>UniRef100_B8C0K4 Fucoxanthin chlorophyll a/c light-harvesting protein, lhcr type n=1
Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C0K4_THAPS
Length = 203
Score = 59.7 bits (143), Expect = 1e-07
Identities = 34/97 (35%), Positives = 56/97 (57%)
Frame = +3
Query: 78 IMYAFVAATPVMSRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGF 257
+M + + A+ S +AFA ++ RA + ++ SKA+P+L P LD + G GF
Sbjct: 1 MMKSVIIASLACSAAAFAPASNGRAATSLEASAK---SKALPWLPNPSNLDG-RIGANGF 56
Query: 258 DPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEV 368
DPL +S Y DY + E+K+GRV M+A G++ ++
Sbjct: 57 DPLGISEYFPVDYLVESEIKHGRVCMMAWAGYVAVDL 93
[46][TOP]
>UniRef100_B8C0K3 Fucoxanthin chl a/c light-harvesting protein n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8C0K3_THAPS
Length = 203
Score = 59.7 bits (143), Expect = 1e-07
Identities = 53/163 (32%), Positives = 83/163 (50%), Gaps = 11/163 (6%)
Frame = +3
Query: 81 MYAFVAATPVM-SRSAFAGSAVSRAPAPVASTMTMKASKA--IPFLEAPEKLDETKAGYA 251
M VAA ++ S SAF AP+ A +T A K+ +PFLEAP LD G
Sbjct: 1 MMKIVAALALVGSTSAFT------APSTGARAVTSLAEKSASLPFLEAPPNLDGG-VGDL 53
Query: 252 GFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEV---VHLPNKQFSNPVALDA-I 419
GFDP S+++ D+ + ELK+GR+ M+A LG++ ++ V+ + F + ++ A
Sbjct: 54 GFDPFRFSDFVPIDFLREAELKHGRICMMAWLGFVAVDMGFRVYPAAEGFESLTSITAHD 113
Query: 420 YQVPVAGWVQILIAISVVE----LATFKMVYDPKRAAXQLGFD 536
V G Q+L+ S++E +A +M+ RA G D
Sbjct: 114 AAVEQGGMSQMLLWFSLLEVFDTIAVQQMLEGSGRAPGDFGLD 156
[47][TOP]
>UniRef100_B7G9B9 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G9B9_PHATR
Length = 216
Score = 59.7 bits (143), Expect = 1e-07
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 13/171 (7%)
Frame = +3
Query: 75 VIMYAFVAATPVMSRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAG 254
++ +A + AT S SAFA + ++ V +++ + SK++PF+ P+ LD + AG G
Sbjct: 1 MMKFAVLTATLAASASAFAPA---QSNTRVVTSLNAERSKSLPFMNRPDLLDGSMAGDVG 57
Query: 255 FDPLYLSNY----LDQDYAAQGELKNGRVAMLACLGWLVAEVV-HLPNKQFSNPVA-LDA 416
FDPL LS +D + + E+K+ RVAM+A G L E+ P + + + DA
Sbjct: 58 FDPLGLSTIEGVGVDLYWLREAEIKHCRVAMMAVAGVLWVELFGPAPGCEMATAKSQTDA 117
Query: 417 IYQVPVA-------GWVQILIAISVVELATFKMVYDPKRAAXQLGFDPLKM 548
+Q+ A G++ + + +A +RA G DPLK+
Sbjct: 118 FWQLWQAHPQYIAFGFIMTGLVEMITGIAITTGRESGQRAPGDFGLDPLKI 168
[48][TOP]
>UniRef100_B7FQS0 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7FQS0_PHATR
Length = 217
Score = 59.7 bits (143), Expect = 1e-07
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 34/175 (19%)
Frame = +3
Query: 120 SAFAGSAVSRAPAPVAS----TMTM--------------KASKAIPFLEAPEKLDETKAG 245
++FA SA + AP+P S T T + SKA+PF P+ LD + G
Sbjct: 8 ASFAASASAFAPSPQNSQNSRTQTSLNNDLWGQPPSDGKEKSKALPFANRPKLLDGSMPG 67
Query: 246 YAGFDPLYLS--NYLDQDYAAQGELKNGRVAMLACLGWLVAEVVHLP-----------NK 386
GFDP + + Y + E+K+ R+AMLA GW+ AE+ P K
Sbjct: 68 DVGFDPFGFAGADKASLMYMREAEIKHCRLAMLAVAGWVFAELFDKPIADAVGLPTALTK 127
Query: 387 QFSNPVALD-AIYQVPVAGWVQILIAISVVELATFKMVYDPKR--AAXQLGFDPL 542
++P L+ + ++ +A W+ ++ +VE+ K+ D + GFDP+
Sbjct: 128 SGASPSILNGGLEKIDIAYWLAVVTLAGIVEIENSKVKEDKGKDYILGDCGFDPI 182
[49][TOP]
>UniRef100_A4QPP6 Chloroplast light-harvesting complex protein Lhcz1; nuclear n=1
Tax=Isochrysis galbana RepID=A4QPP6_ISOGA
Length = 222
Score = 59.7 bits (143), Expect = 1e-07
Identities = 52/162 (32%), Positives = 69/162 (42%), Gaps = 18/162 (11%)
Frame = +3
Query: 120 SAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQ-DY 296
S A + S PAPV T TM+ D T AG GFDP L+ ++ Y
Sbjct: 25 SMVAETPASPPPAPVPLTSTMRVG------------DNTLAGDFGFDPFQLAESPERLAY 72
Query: 297 AAQGELKNGRVAMLACLGWLVAEVVHLP-----------NKQFSNPVALD-AIYQVPVAG 440
+ E+K+ R+AMLA GW +AE+++ P K +P L+ + VP
Sbjct: 73 YREAEVKHARLAMLAAAGWPMAELLNKPLSDALGVKSILTKSGESPSILNGGLGNVPAVY 132
Query: 441 WVQILIAISVVELATFKMVY-----DPKRAAXQLGFDPLKMD 551
W IL VE + DPK L FDPL MD
Sbjct: 133 WALILGLAIYVEAKSLDTQLNIGKRDPKYIPGMLQFDPLGMD 174
[50][TOP]
>UniRef100_B8LDJ7 Fucoxanthin chl a/c light-harvesting protein n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8LDJ7_THAPS
Length = 222
Score = 59.3 bits (142), Expect = 2e-07
Identities = 53/170 (31%), Positives = 75/170 (44%), Gaps = 20/170 (11%)
Frame = +3
Query: 93 VAATPVMSRSAFAGSAVSRAPAPVASTMTMKA----SKAIPFLEAPEKLDETKAGYAGFD 260
V A+ V S +AFA ++ + V T T+ A SKA+PF+ P+ LD T AG GFD
Sbjct: 4 VLASLVTSAAAFAPASTN-----VRQTTTLTAEKEMSKALPFVPRPKLLDGTLAGDVGFD 58
Query: 261 PLYLSNYLDQDYAA--QGELKNGRVAMLACLGWLVAEVVH------------LPNKQFSN 398
P + + + E+K+ R+AMLA +GW +AE L N S
Sbjct: 59 PFGFGGADKESLISMREAEIKHSRLAMLAAVGWPLAEKFDGAIAQFLGLPSALTNSGASP 118
Query: 399 PVALDAIYQVPVAGWVQILIAISVVELAT--FKMVYDPKRAAXQLGFDPL 542
V + ++ WV + + ELA K K GFDPL
Sbjct: 119 SVLNGGLDKIEPDYWVIVAAIAGLAELANNETKTATGKKYTPGDCGFDPL 168
[51][TOP]
>UniRef100_Q5K278 Light harvesting protein 5 (Fragment) n=1 Tax=Guillardia theta
RepID=Q5K278_GUITH
Length = 225
Score = 58.5 bits (140), Expect = 3e-07
Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Frame = +3
Query: 183 KASKAIPFLEAPEK--LDETKAGYAGFDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWL 356
K AIPF P D T AG GFDPL +S +LD + + ELK+ RVAMLA G +
Sbjct: 49 KGVTAIPFAGRPNTPAFDGTWAGDVGFDPLTISGWLDIKWLREAELKHCRVAMLAVAGCI 108
Query: 357 VAEVVHLPNKQ--FSNPVAL----DAIYQVPVAG----WVQILIAISVVELATFKMVYDP 506
++ P + +S+ + L DA + G W+ AIS A +M+
Sbjct: 109 AQDLFRFPGAETVYSSDLKLTKLHDAALKTGTMGQMLFWLGSFEAISTA--AVIQMLQGS 166
Query: 507 KRAAXQLGFDPL 542
R GFDPL
Sbjct: 167 GRKPGDFGFDPL 178
[52][TOP]
>UniRef100_B8BYV3 Member of fucoxanthin chlorophyll a/c family, lhca clade n=1
Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BYV3_THAPS
Length = 219
Score = 58.5 bits (140), Expect = 3e-07
Identities = 54/154 (35%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Frame = +3
Query: 129 AGSAVSRAPAPVA---STMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNY----LD 287
AGSA S PA + S + + S+A+PFL P LD + AG GFDPL LS +D
Sbjct: 11 AGSAYSFCPAANSVRSSALNAEKSQAMPFLNKPALLDGSMAGDKGFDPLGLSTIDDVGID 70
Query: 288 QDYAAQGELKNGRVAMLACLGWLVAEVV-HLPNKQFSN-PVALDAIYQV-------PVAG 440
+ + E+K+ RVAMLA G L EV P + + DA +Q+ A
Sbjct: 71 LYWLREAEIKHARVAMLAVAGALQVEVFGPAPGCEMATAKCQTDAFWQIWSAHPQYIAAS 130
Query: 441 WVQILIAISVVELATFKMVYDPKRAAXQLGFDPL 542
V I I +V +A RA G DPL
Sbjct: 131 LVLITIVEAVSGIAATTGRESGDRAPGDFGLDPL 164
[53][TOP]
>UniRef100_A4QPJ2 Chloroplast protein Lhcz1 (Fragment) n=1 Tax=Bigelowiella natans
RepID=A4QPJ2_BIGNA
Length = 226
Score = 58.5 bits (140), Expect = 3e-07
Identities = 51/154 (33%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Frame = +3
Query: 144 SRAPAPVASTMTM--KASKAIPFLEAPEKLDE-TKAGYAGFDPLYLSNYLDQDYAAQ--- 305
+RA P A T T K S+A+PFLE P LD AG GFDP+ L+ D++ Q
Sbjct: 48 TRAEIPEAPTTTTETKMSEAVPFLERPSNLDAYPMAGDYGFDPIKLAK--DKETLIQYRL 105
Query: 306 GELKNGRVAMLACLGW--------LVAEVVHLPN-----KQFSNPVALDAIYQVPVAGWV 446
E+K+GR+AMLA + W ++A++ +LPN S V + QV W
Sbjct: 106 AEIKHGRLAMLAAVAWPLQELENPVLAKMFNLPNLVEETSGRSPSVLNGGLEQVSATYWT 165
Query: 447 QILIAISVVELATFKMVYDPKRAAXQLGFDPLKM 548
+L+ V+E + GFDPL +
Sbjct: 166 AVLLLTIVIE-TIGNDSWGGTIQPGDYGFDPLNL 198
[54][TOP]
>UniRef100_B8C7L8 Fucoxanthin chl a/c light-harvesting protein n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8C7L8_THAPS
Length = 256
Score = 57.0 bits (136), Expect = 9e-07
Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Frame = +3
Query: 150 APAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQD-YAAQGELKNGR 326
A A ST K S ++PFL P+ L AG GFDPL LS+ ++ Y + E+K+ R
Sbjct: 32 ALATPPSTSLSKYSPSLPFLRRPQFLTGEFAGDVGFDPLGLSSSSEKVLYYREAEIKHAR 91
Query: 327 VAMLACLGWLVAEVVHLPNKQ-------FSNPVALDAIYQVP 431
+AMLA GW ++E++ P Q S ALDA +VP
Sbjct: 92 LAMLAAAGWPLSELLDRPLTQQLDSSFNLSLSPALDATDRVP 133
[55][TOP]
>UniRef100_B5Y4K0 Fucoxanthin chlorophyll a/c protein, lhcr type n=1
Tax=Phaeodactylum tricornutum CCAP 1055/1
RepID=B5Y4K0_PHATR
Length = 279
Score = 57.0 bits (136), Expect = 9e-07
Identities = 48/138 (34%), Positives = 69/138 (50%), Gaps = 20/138 (14%)
Frame = +3
Query: 189 SKAIPFLEAPEKLDETKAGYAGFDPLYLSNYLDQDYA----AQGELKNGRVAMLACLGWL 356
S AIPFL+ PE LD + G GFDP ++D + + + E+K+ R+AMLA GW
Sbjct: 80 STAIPFLKRPEFLDGSMPGDVGFDPF---GFVDSEASLVSFREAEIKHARLAMLAAAGWP 136
Query: 357 VAEVVHLPNKQFSN----PVALDAIYQVP-----------VAGWVQILIAISVVEL-ATF 488
++E L ++QF++ ALDA +VP W L A + ++L
Sbjct: 137 LSE---LFDRQFASWLDLDPALDATDRVPSILNGGLGKISPVYWGACLGAAAAIDLYGLR 193
Query: 489 KMVYDPKRAAXQLGFDPL 542
K DP +LGFDPL
Sbjct: 194 KKRSDPDYFPGKLGFDPL 211
[56][TOP]
>UniRef100_Q9LKN9 Light-harvesting complex protein LHCC4 (Fragment) n=1
Tax=Guillardia theta RepID=Q9LKN9_GUITH
Length = 219
Score = 56.6 bits (135), Expect = 1e-06
Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 24/167 (14%)
Frame = +3
Query: 114 SRSAFAGSAV----SRAPAPVASTMTM--------KASKAIPFLEAPEKLDETKAGYAGF 257
S +AFA SA+ +RA +M + K IP P LD T G GF
Sbjct: 12 SAAAFAPSAMLPRATRAARATGPSMQLYKDGSLQGKGVNIIPIFPRPASLDGTAVGDQGF 71
Query: 258 DPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLV-AEVVHLPNKQ--FSNPVALDAIYQV 428
DP S++++ + + E+K+GR+AMLA G +V A + P + F + I+ +
Sbjct: 72 DPFGFSSWVNMKFVREAEIKHGRIAMLAFAGIMVEAAGIKAPGVESVFGPTKDIFEIHNL 131
Query: 429 PV--AGWVQILIAISVVEL-----ATFKMVYDP--KRAAXQLGFDPL 542
V QIL+ +E+ A +M+ DP KR GFDPL
Sbjct: 132 AVEKGSMGQILLWTGFLEMVIGWPAMNEMLNDPSSKRIPGDFGFDPL 178
[57][TOP]
>UniRef100_B8BYV4 Fucoxanthin chl a/c light-harvesting protein n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8BYV4_THAPS
Length = 214
Score = 56.6 bits (135), Expect = 1e-06
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 9/87 (10%)
Frame = +3
Query: 129 AGSAVSRAPAP---VASTMTMKASKAIPFLEAPEKLDETKAGYAGFDPLYLSNY----LD 287
AGSA + APA +S + + S ++PF+ P LD + GY GFDPL LSN +D
Sbjct: 12 AGSASAFAPASNSVKSSALNAERSPSLPFMNKPALLDPSMPGYKGFDPLGLSNIDDVGID 71
Query: 288 QDYAAQGELKNGRVAMLACLG--WLVA 362
+ + E+K+ RVAMLA G W+ A
Sbjct: 72 LYWLREAEIKHARVAMLAVAGAVWVEA 98
[58][TOP]
>UniRef100_B8BU33 Fucoxanthin chlorophyll a/c light-harvesting protein n=1
Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BU33_THAPS
Length = 252
Score = 56.6 bits (135), Expect = 1e-06
Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 44/187 (23%)
Frame = +3
Query: 114 SRSAFA----GSAVSRAPAPVASTMTMKA------SKAIPFLEAPEKLDETKAGYAGFDP 263
S SAFA G+AV + + M K SKA+PFL P LD + G GFDP
Sbjct: 14 SASAFAPANNGAAVKTSLDAMPDRMWNKMVDKTQRSKAMPFLPRPINLDGSYVGDVGFDP 73
Query: 264 LYLSNYLDQDYAA--------------------QGELKNGRVAMLACLGWLVAE------ 365
YLS+ +D+++A + ELK+GR+AM+A GWL +
Sbjct: 74 FYLSS-IDKNFAGFIQPPSWEETNGLPTLYWMREAELKHGRIAMMAFAGWLATDFGVRFP 132
Query: 366 -----VVHLPNKQFSNPVALDA---IYQVPVAGWVQILIAISVVELATFKMVYDPKRAAX 521
+PN ++ + +D+ + + G+++I A +VE++ + R A
Sbjct: 133 GAGEPYTSVPNAFSAHNIMVDSGAMWVMLSLIGFIEISTAAVLVEVSK----GENDREAG 188
Query: 522 QLGFDPL 542
FDPL
Sbjct: 189 DFCFDPL 195
[59][TOP]
>UniRef100_B7G871 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G871_PHATR
Length = 197
Score = 55.8 bits (133), Expect = 2e-06
Identities = 54/168 (32%), Positives = 79/168 (47%), Gaps = 11/168 (6%)
Frame = +3
Query: 81 MYAFVAATPVMSRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAGFD 260
M +AA+ V SAFA S++ A A +A P+ ++ T G+ FD
Sbjct: 1 MKLLLAASLVSVTSAFAPSSLKSATT---------ALQASPYENELGVIEPT--GF--FD 47
Query: 261 PLYLSNYLDQDYAAQ---GELKNGRVAMLACLGWLVAEVVH--------LPNKQFSNPVA 407
PL LS +DQ+ Q ELK+GRVA LA +G++V E+ LP + N VA
Sbjct: 48 PLGLSKDIDQEKFDQYRTAELKHGRVAQLAVIGYVVQEIYRFPFDIAPGLPCAEVPNGVA 107
Query: 408 LDAIYQVPVAGWVQILIAISVVELATFKMVYDPKRAAXQLGFDPLKMD 551
AI +P GW QI + V+ + +D A + DP +M+
Sbjct: 108 --AIQAIPALGWAQIFFLVGSVDYYGYLGDFD----AGKPDLDPAEME 149
[60][TOP]
>UniRef100_B7FPL6 Fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7FPL6_PHATR
Length = 193
Score = 55.8 bits (133), Expect = 2e-06
Identities = 45/135 (33%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Frame = +3
Query: 108 VMSRSAFAGSAVSRAPAPVASTMTMKASKAIPFLEAPEKLDETKAGYAG----FDPLYLS 275
+ S A GSA + APA + + S ++ + DET G FDPL LS
Sbjct: 3 IASLFAIVGSAAAFAPA----SQIHRGSSSLSAWK-----DETVVGITAPVGFFDPLGLS 53
Query: 276 NYLDQD---YAAQGELKNGRVAMLACLGWLVAEVVHLP--NKQFSNPVALDAIYQVPVAG 440
+ + Y + ELK+GRVAM ACLGW + P N + S+ L+A Q+P
Sbjct: 54 KDKNDETMGYYRESELKHGRVAMAACLGWFITAGGTHPAFNSELSSD-PLEAARQLPFVA 112
Query: 441 WVQILIAISVVELAT 485
W+Q ++ VE T
Sbjct: 113 WLQFILGCGAVEWLT 127
[61][TOP]
>UniRef100_B8C0G1 Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8C0G1_THAPS
Length = 221
Score = 55.1 bits (131), Expect = 3e-06
Identities = 41/120 (34%), Positives = 54/120 (45%), Gaps = 29/120 (24%)
Frame = +3
Query: 270 LSNYLDQDYAAQG-------ELKNGRVAMLACLGWLVAEV-VHLPNKQ------------ 389
L Y+ QD G E+KNGRVAM+A +G+LV + VH P
Sbjct: 52 LGRYILQDVNEDGIKWWQNAEIKNGRVAMVATIGYLVQKTGVHFPLYMGPNSSSDWLLSS 111
Query: 390 --------FSNPVALDAIYQVPVAGWVQILIAISVVELATFKMVY-DPKRAAXQLGFDPL 542
S+ ALD I VP AGW+Q+L A + EL +K + D G+DPL
Sbjct: 112 TSGVTFGDVSHANALDTIAMVPSAGWLQVLFAAGLFELTAYKRQWMDGNEIPGDYGYDPL 171
[62][TOP]
>UniRef100_UPI000184A2B2 Serine/arginine repetitive matrix protein 2 (Serine/arginine-rich
splicing factor-related nuclear matrix protein of 300
kDa) (Ser/Arg- related nuclear matrix protein)
(SR-related nuclear matrix protein of 300 kDa) (Splicing
coactivator subunit SRm300) (30 n=1 Tax=Canis lupus
familiaris RepID=UPI000184A2B2
Length = 2682
Score = 55.1 bits (131), Expect = 3e-06
Identities = 59/173 (34%), Positives = 82/173 (47%), Gaps = 5/173 (2%)
Frame = -1
Query: 540 AGQSRAAPPRASGRTPS*RSPAQPQRWR*GSEPTQQQGPGRWR-PGRRG*RTACWAGARP 364
+G+SR+ P GR+ S R+PA+ R R S ++G R R P RRG +R
Sbjct: 576 SGRSRSRTPARRGRSRS-RTPARRGRSR--SRTPARRGRSRSRTPARRG-------RSRS 625
Query: 363 RPPA---SQGRRASPHGRSSTRPGQRSPGRGSCSGTAGQTRHTQP*SRPASQAPPGRG*- 196
R PA S+ R GRS +R QR GS S ++R +Q SR S +
Sbjct: 626 RTPARRRSRSRSVVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRI 685
Query: 195 PSRPSSSSSTPLAPARERPLTPRRRSGSSPG*QPQRRT**REGGTGGMRKEEK 37
SR S S S+P + A+ R R SGSSP + + RT R +G + + K
Sbjct: 686 SSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSRTPPRRSRSGSSQPKAK 738
[63][TOP]
>UniRef100_Q9UQ39 RNA binding protein (Fragment) n=1 Tax=Homo sapiens
RepID=Q9UQ39_HUMAN
Length = 956
Score = 54.7 bits (130), Expect = 5e-06
Identities = 56/170 (32%), Positives = 80/170 (47%), Gaps = 2/170 (1%)
Frame = -1
Query: 540 AGQSRAAPPRASGRTPS*RSPAQPQRWR*GSEPTQQQGPGRWR-PGRRG*RTACWAGARP 364
+G+SR+ P GR+ S R+PA+ R R P ++ G R R P RRG + P
Sbjct: 609 SGRSRSRTPARRGRSRS-RTPARRGRSR-SRTPARRSGRSRSRTPARRGRSRS----RTP 662
Query: 363 RPPASQGRRASPHGRSSTRPGQRSPGRGSCSGTAGQTRHTQP*SRPASQAPPGRG*-PSR 187
R S+ R GRS +R QR GS S ++R +Q SR S + SR
Sbjct: 663 RRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSR 722
Query: 186 PSSSSSTPLAPARERPLTPRRRSGSSPG*QPQRRT**REGGTGGMRKEEK 37
S S S+P + A+ R R SGSSP + + +T R +G + + K
Sbjct: 723 RSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAK 772
[64][TOP]
>UniRef100_Q9UQ35-2 Isoform 2 of Serine/arginine repetitive matrix protein 2 n=1 Tax=Homo
sapiens RepID=Q9UQ35-2
Length = 2334
Score = 54.7 bits (130), Expect = 5e-06
Identities = 56/170 (32%), Positives = 80/170 (47%), Gaps = 2/170 (1%)
Frame = -1
Query: 540 AGQSRAAPPRASGRTPS*RSPAQPQRWR*GSEPTQQQGPGRWR-PGRRG*RTACWAGARP 364
+G+SR+ P GR+ S R+PA+ R R P ++ G R R P RRG + P
Sbjct: 644 SGRSRSRTPARRGRSRS-RTPARRGRSR-SRTPARRSGRSRSRTPARRGRSRS----RTP 697
Query: 363 RPPASQGRRASPHGRSSTRPGQRSPGRGSCSGTAGQTRHTQP*SRPASQAPPGRG*-PSR 187
R S+ R GRS +R QR GS S ++R +Q SR S + SR
Sbjct: 698 RRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSR 757
Query: 186 PSSSSSTPLAPARERPLTPRRRSGSSPG*QPQRRT**REGGTGGMRKEEK 37
S S S+P + A+ R R SGSSP + + +T R +G + + K
Sbjct: 758 RSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAK 807
[65][TOP]
>UniRef100_Q9UQ35 Serine/arginine repetitive matrix protein 2 n=1 Tax=Homo sapiens
RepID=SRRM2_HUMAN
Length = 2752
Score = 54.7 bits (130), Expect = 5e-06
Identities = 56/170 (32%), Positives = 80/170 (47%), Gaps = 2/170 (1%)
Frame = -1
Query: 540 AGQSRAAPPRASGRTPS*RSPAQPQRWR*GSEPTQQQGPGRWR-PGRRG*RTACWAGARP 364
+G+SR+ P GR+ S R+PA+ R R P ++ G R R P RRG + P
Sbjct: 644 SGRSRSRTPARRGRSRS-RTPARRGRSR-SRTPARRSGRSRSRTPARRGRSRS----RTP 697
Query: 363 RPPASQGRRASPHGRSSTRPGQRSPGRGSCSGTAGQTRHTQP*SRPASQAPPGRG*-PSR 187
R S+ R GRS +R QR GS S ++R +Q SR S + SR
Sbjct: 698 RRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSR 757
Query: 186 PSSSSSTPLAPARERPLTPRRRSGSSPG*QPQRRT**REGGTGGMRKEEK 37
S S S+P + A+ R R SGSSP + + +T R +G + + K
Sbjct: 758 RSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAK 807
[66][TOP]
>UniRef100_UPI0000F2DB84 PREDICTED: similar to splicing coactivator subunit SRm300 n=1
Tax=Monodelphis domestica RepID=UPI0000F2DB84
Length = 2785
Score = 54.3 bits (129), Expect = 6e-06
Identities = 54/178 (30%), Positives = 72/178 (40%), Gaps = 8/178 (4%)
Frame = -1
Query: 537 GQSRAAPP----RASGRTPS*RSPAQPQRWR*GSEPTQQQGPGRWRPGRRG*RTACWAGA 370
G+SR+ P R+ RTP R PQRW P Q++G R P R G W+ +
Sbjct: 501 GRSRSRTPNRRGRSRSRTPQWRRSRSPQRWGRSRSP-QRRGRSR-SPQRPG-----WSRS 553
Query: 369 RPRPPASQGRRASPHGRSSTR-PGQRSPGRGSCSGTAGQTRHTQP*SRPASQAPPGRG*P 193
R + R A+ GRS +R P R R G++R P R + P
Sbjct: 554 RNAQRRGRSRSAARRGRSRSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTP----- 608
Query: 192 SRPSSSSSTPLAPARERPLTPRRRSGSSPG*QPQR---RT**REGGTGGMRKEEKESG 28
+R S S TP R R TP RR + +R R+ R GG R + G
Sbjct: 609 ARRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRTRSPARRGGRSRSRTPARRGG 666
[67][TOP]
>UniRef100_B8C770 Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8C770_THAPS
Length = 194
Score = 53.9 bits (128), Expect = 8e-06
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 FDPLYLSNYLDQDYAAQGELKNGRVAMLACLGWLVAEVV-HLPNKQFSNPVALDAIYQVP 431
FDPL LS+Y+ D+A + EL NGR AMLA +GW +V + + +DAI Q
Sbjct: 48 FDPLNLSDYVPVDWARRAELSNGRSAMLATVGWFFPKVFGTFDSTDVTTTDPIDAIMQAD 107
Query: 432 VAGWVQILIAISVVELATFKMVYDPK 509
W Q ++ V E +K + K
Sbjct: 108 PQWWAQWILICGVFETWKYKKEMEGK 133
[68][TOP]
>UniRef100_UPI00015558E9 PREDICTED: similar to splicing coactivator subunit SRm300, partial
n=1 Tax=Ornithorhynchus anatinus RepID=UPI00015558E9
Length = 2677
Score = 53.9 bits (128), Expect = 8e-06
Identities = 61/196 (31%), Positives = 75/196 (38%), Gaps = 26/196 (13%)
Frame = -1
Query: 537 GQSRAAPP----RASGRTPS*RSPAQPQRWR*GSEPTQQQGPGR--WRPGRRG*RTACWA 376
G+SR+ P R+ RTP R PQRW P Q++G R RPG R A
Sbjct: 374 GRSRSRTPARKGRSRSRTPQWRRSRSPQRWGRSRSP-QRRGRSRSPQRPGWSRSRNAQRR 432
Query: 375 GARPRPPASQGRRASPHGRSSTRPGQRSPGRGSCSGTAGQTR-----HTQP*SRPASQAP 211
G R R A +GR S + R R+P R S + TR T R S+ P
Sbjct: 433 G-RSRSTARRGRSRSKTPATRGRSRSRTPARRGRSRSRTPTRRRSRSRTSTRRRSRSRTP 491
Query: 210 PGRG---------------*PSRPSSSSSTPLAPARERPLTPRRRSGSSPG*QPQRRT** 76
RG P R S + +P+ R R TP RR G S P RR
Sbjct: 492 TRRGRSRSRTPARRRSRTRSPVRRRSRTRSPVRRGRSRSRTPARRGGRSRSRTPARR--- 548
Query: 75 REGGTGGMRKEEKESG 28
GG R + G
Sbjct: 549 --GGRSRSRTPARRGG 562
Score = 53.9 bits (128), Expect = 8e-06
Identities = 59/160 (36%), Positives = 78/160 (48%), Gaps = 8/160 (5%)
Frame = -1
Query: 537 GQSRA-APPRASGRTPS*RSPAQPQRWR*GSEPTQQQGPGRWR-PGRRG*RTACWAGARP 364
G+SR+ P R GR+ S R+PA+ P ++ G R R P RRG R+ R
Sbjct: 526 GRSRSRTPARRGGRSRS-RTPARRGGRSRSRTPARRGGRSRSRTPARRGGRS------RS 578
Query: 363 RPPASQGRRA---SP--HGRSSTRPGQRSPGRGSCSGTAGQTRHTQP*SRPASQAPPGRG 199
R PA +G R+ SP GRS +R R GS S ++R +Q SR S +
Sbjct: 579 RTPARRGARSRTRSPVRRGRSHSRTPPRRGRSGSSSERKNKSRASQR-SRSNSSPEVKKS 637
Query: 198 *PS-RPSSSSSTPLAPARERPLTPRRRSGSSPG*QPQRRT 82
S R S S S+P A+ RP R RSGSSP + + RT
Sbjct: 638 RTSLRRSRSLSSPRPKAKSRPSLRRSRSGSSPRPKAKSRT 677
[69][TOP]
>UniRef100_UPI0000D9FB77 PREDICTED: hypothetical protein, partial n=1 Tax=Macaca mulatta
RepID=UPI0000D9FB77
Length = 205
Score = 53.9 bits (128), Expect = 8e-06
Identities = 53/160 (33%), Positives = 61/160 (38%), Gaps = 22/160 (13%)
Frame = -1
Query: 519 PPRASGRTPS*RSPAQPQRWR*GSEPTQQQGPGRWRPGRRG*RTACWAGARPRPPAS--- 349
PPR R P RS +QP P + PG W P RRG R +G++P PPA
Sbjct: 21 PPRRGCRQPP-RSGSQP--------PPPARPPGFWEPPRRGCRQPPRSGSQPPPPARPPG 71
Query: 348 ------QGRRASPHGRSSTRPGQRSPG-----RGSCSGTAGQTRHTQP*SRPASQAPPGR 202
+G R P S P R PG R C P +RP P R
Sbjct: 72 FWEPPRRGCRQPPRSGSQPPPPARPPGFWEPPRRGCRQPPRSGSQPPPPARPPGFWEPPR 131
Query: 201 G*PSRPSSSSSTPLAPARERPL--TPRR------RSGSSP 106
+P S S P PAR PRR RSGS P
Sbjct: 132 RGCRQPPRSGSQPPPPARPPGFWEPPRRGCRQPPRSGSQP 171
[70][TOP]
>UniRef100_B7G4U8 Protein fucoxanthin chlorophyll a/c protein n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G4U8_PHATR
Length = 260
Score = 53.5 bits (127), Expect = 1e-05
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 16/135 (11%)
Frame = +3
Query: 183 KASKAIPFLEAPEKLDETKAGYAGFDPL-YLSNYLDQDYAAQGELKNGRVAMLACLGWLV 359
K S+++PF+E P LD T G GFDPL + D + E+K+ R+AMLA GW +
Sbjct: 58 KMSQSLPFMERPAALDGTLVGDVGFDPLGFAKTKADLINYREAEVKHARLAMLAAAGWPL 117
Query: 360 AEV--VHLPNKQFSNPVALDA-----------IYQVPVAGWVQILIAISVVELATFKMV- 497
+E+ + N P+ LDA + +V WV L+A + +++
Sbjct: 118 SELFDAKIANWMGMTPL-LDANDRAPSLLNGGLGKVSPVYWVACLVAAAAIDVYGISKAR 176
Query: 498 -YDPKRAAXQLGFDP 539
+P LG DP
Sbjct: 177 KNEPDYFPGNLGIDP 191