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[1][TOP]
>UniRef100_UPI0001982FDF PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
           RepID=UPI0001982FDF
          Length = 1198

 Score =  307 bits (786), Expect = 4e-82
 Identities = 144/189 (76%), Positives = 164/189 (86%)
 Frame = +2

Query: 5   VKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           VK  ++ P ES++EC++ YLFP  SG+ +KARFL YMVK LL AYTGRRKCDNRDDFRNK
Sbjct: 358 VKSCKFPPGESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNK 417

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R ELA ELLEREL+VH  HA +RM KA+QR+L GDRD+RPIE+YLDASIITNGL RAFST
Sbjct: 418 RLELAGELLERELRVHIRHAERRMVKAMQRELYGDRDLRPIENYLDASIITNGLSRAFST 477

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G W+HP+KR+ER SGVVA L RTNPLQ  A++R+TRQQVQYTGKVGDARYPHPSHWGKVC
Sbjct: 478 GQWSHPFKRMERISGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKVC 537

Query: 545 FLSTPDGEN 571
           FLSTPDGEN
Sbjct: 538 FLSTPDGEN 546

[2][TOP]
>UniRef100_A7P644 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
           RepID=A7P644_VITVI
          Length = 1154

 Score =  307 bits (786), Expect = 4e-82
 Identities = 144/189 (76%), Positives = 164/189 (86%)
 Frame = +2

Query: 5   VKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           VK  ++ P ES++EC++ YLFP  SG+ +KARFL YMVK LL AYTGRRKCDNRDDFRNK
Sbjct: 333 VKSCKFPPGESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNK 392

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R ELA ELLEREL+VH  HA +RM KA+QR+L GDRD+RPIE+YLDASIITNGL RAFST
Sbjct: 393 RLELAGELLERELRVHIRHAERRMVKAMQRELYGDRDLRPIENYLDASIITNGLSRAFST 452

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G W+HP+KR+ER SGVVA L RTNPLQ  A++R+TRQQVQYTGKVGDARYPHPSHWGKVC
Sbjct: 453 GQWSHPFKRMERISGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKVC 512

Query: 545 FLSTPDGEN 571
           FLSTPDGEN
Sbjct: 513 FLSTPDGEN 521

[3][TOP]
>UniRef100_Q9LK40 DNA-directed RNA polymerase n=1 Tax=Arabidopsis thaliana
           RepID=Q9LK40_ARATH
          Length = 1172

 Score =  304 bits (778), Expect = 4e-81
 Identities = 136/189 (71%), Positives = 167/189 (88%)
 Frame = +2

Query: 5   VKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           +K  ++ P+ES++ECL+LYLFPG   L +KARFL YMVK LL +Y G+RKC+NRD FRNK
Sbjct: 339 IKSTKFPPAESVDECLHLYLFPGLQSLKKKARFLGYMVKCLLNSYAGKRKCENRDSFRNK 398

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R ELA ELLERE++VH AHAR++M++A+Q+ L+GD D++PIEHYLDAS+ITNGL RAFST
Sbjct: 399 RIELAGELLEREIRVHLAHARRKMTRAMQKHLSGDGDLKPIEHYLDASVITNGLSRAFST 458

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           GAW+HP++++ER SGVVANLGR NPLQT+ +LRRTRQQV YTGKVGDARYPHPSHWG+VC
Sbjct: 459 GAWSHPFRKMERVSGVVANLGRANPLQTLIDLRRTRQQVLYTGKVGDARYPHPSHWGRVC 518

Query: 545 FLSTPDGEN 571
           FLSTPDGEN
Sbjct: 519 FLSTPDGEN 527

[4][TOP]
>UniRef100_Q17U53 DNA-directed RNA polymerase, putative n=1 Tax=Solanum bulbocastanum
           RepID=Q17U53_SOLBU
          Length = 1018

 Score =  303 bits (776), Expect = 6e-81
 Identities = 146/189 (77%), Positives = 159/189 (84%)
 Frame = +2

Query: 5   VKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           VK  ++ P ES+EEC+  YLFP  SGL +KARFL YMVK LLL+Y GRRK DNRDDFRNK
Sbjct: 377 VKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCLLLSYIGRRKVDNRDDFRNK 436

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R +LA ELLEREL+VH  HA +RM KALQRDL GDR V+PIEHYLDASIITNGL RAFST
Sbjct: 437 RLDLAGELLERELRVHVKHAERRMVKALQRDLCGDRQVQPIEHYLDASIITNGLSRAFST 496

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G W HPYKR+ER SGVVA L RTNPLQ  A+LR+TRQQV YTGKVGDARYPHPSHWGKVC
Sbjct: 497 GHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTYTGKVGDARYPHPSHWGKVC 556

Query: 545 FLSTPDGEN 571
           FLSTPDGEN
Sbjct: 557 FLSTPDGEN 565

[5][TOP]
>UniRef100_UPI00015057D8 NRPD2b; DNA binding / DNA-directed RNA polymerase/ ribonucleoside
           binding n=1 Tax=Arabidopsis thaliana RepID=UPI00015057D8
          Length = 1055

 Score =  301 bits (771), Expect = 2e-80
 Identities = 135/189 (71%), Positives = 166/189 (87%)
 Frame = +2

Query: 5   VKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           +K  ++ P+ES+++CL LYLFP   GL +KARFL YMVK LL AY G+RKC+NRD FRNK
Sbjct: 221 IKSTKFPPAESVDDCLRLYLFPCLQGLKKKARFLGYMVKCLLSAYAGKRKCENRDSFRNK 280

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R ELA ELLERE++VH AHAR++M++A+Q+ L+GD D++PIEHYLDAS+ITNGL RAFST
Sbjct: 281 RIELAGELLEREIRVHLAHARRKMTRAMQKQLSGDGDLKPIEHYLDASVITNGLNRAFST 340

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           GAW+HP++++ER SGVVANLGR NPLQT+ +LRRTRQQV YTGKVGDAR+PHPSHWG+VC
Sbjct: 341 GAWSHPFRKMERVSGVVANLGRANPLQTLIDLRRTRQQVLYTGKVGDARHPHPSHWGRVC 400

Query: 545 FLSTPDGEN 571
           FLSTPDGEN
Sbjct: 401 FLSTPDGEN 409

[6][TOP]
>UniRef100_Q9LV32 DNA-directed RNA polymerase n=1 Tax=Arabidopsis thaliana
           RepID=Q9LV32_ARATH
          Length = 1119

 Score =  301 bits (771), Expect = 2e-80
 Identities = 135/189 (71%), Positives = 166/189 (87%)
 Frame = +2

Query: 5   VKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           +K  ++ P+ES+++CL LYLFP   GL +KARFL YMVK LL AY G+RKC+NRD FRNK
Sbjct: 285 IKSTKFPPAESVDDCLRLYLFPCLQGLKKKARFLGYMVKCLLSAYAGKRKCENRDSFRNK 344

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R ELA ELLERE++VH AHAR++M++A+Q+ L+GD D++PIEHYLDAS+ITNGL RAFST
Sbjct: 345 RIELAGELLEREIRVHLAHARRKMTRAMQKQLSGDGDLKPIEHYLDASVITNGLNRAFST 404

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           GAW+HP++++ER SGVVANLGR NPLQT+ +LRRTRQQV YTGKVGDAR+PHPSHWG+VC
Sbjct: 405 GAWSHPFRKMERVSGVVANLGRANPLQTLIDLRRTRQQVLYTGKVGDARHPHPSHWGRVC 464

Query: 545 FLSTPDGEN 571
           FLSTPDGEN
Sbjct: 465 FLSTPDGEN 473

[7][TOP]
>UniRef100_B9IL57 DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa
           RepID=B9IL57_POPTR
          Length = 1160

 Score =  300 bits (767), Expect = 7e-80
 Identities = 142/189 (75%), Positives = 160/189 (84%)
 Frame = +2

Query: 5   VKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           +K  ++ P ES+E+ ++ YLFP  +    KARFL YMVK LL AYTG RKCDNRD FRNK
Sbjct: 330 LKKTRFPPKESIEDAISAYLFPRLNSRRHKARFLGYMVKCLLEAYTGHRKCDNRDSFRNK 389

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           RFELA+ELLERELKVH +HA +RM+KALQRDL GDRDV PIEHYLDASI+TNGL RAFST
Sbjct: 390 RFELASELLERELKVHVSHALRRMTKALQRDLYGDRDVHPIEHYLDASIVTNGLTRAFST 449

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           GAW HP+K +ER SGVV NLGR NPLQTM +LR+TRQQV YTGKVGDARYPHPSHWG+VC
Sbjct: 450 GAWCHPFKWMERVSGVVGNLGRANPLQTMIDLRKTRQQVLYTGKVGDARYPHPSHWGRVC 509

Query: 545 FLSTPDGEN 571
           FLSTPDGEN
Sbjct: 510 FLSTPDGEN 518

[8][TOP]
>UniRef100_B9RNV9 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
           RepID=B9RNV9_RICCO
          Length = 1203

 Score =  299 bits (766), Expect = 9e-80
 Identities = 143/189 (75%), Positives = 162/189 (85%)
 Frame = +2

Query: 5   VKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           ++G ++ P E+ E+   LYLFP    L +KARFL YMVK LL AY G+RKC+N D FRNK
Sbjct: 363 IRGTRFPPGEN-EDFFLLYLFPTLHSLRQKARFLGYMVKCLLQAYNGQRKCNNWDSFRNK 421

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           RFELA ELLERELKVH AHAR+RM+KALQ+DL GDRDVRPIEHYLDASI+TNGL RAFST
Sbjct: 422 RFELAKELLERELKVHIAHARRRMAKALQKDLYGDRDVRPIEHYLDASIVTNGLSRAFST 481

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           GAW+HPYKR+ER SGVVANLGR NPLQTM +LR+TR  VQYTGKVGDAR+PHPSHWG+VC
Sbjct: 482 GAWSHPYKRMERISGVVANLGRANPLQTMVDLRKTRYHVQYTGKVGDARFPHPSHWGRVC 541

Query: 545 FLSTPDGEN 571
           FLSTPDGEN
Sbjct: 542 FLSTPDGEN 550

[9][TOP]
>UniRef100_Q1L6V6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum lycopersicum
           RepID=Q1L6V6_SOLLC
          Length = 1123

 Score =  296 bits (758), Expect = 7e-79
 Identities = 139/189 (73%), Positives = 157/189 (83%)
 Frame = +2

Query: 5   VKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           +K  ++ P ES+EEC+N YLFP  SG  +KARFL YMVK LL ++ GRRK DNRDDFRNK
Sbjct: 371 IKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLHSFIGRRKVDNRDDFRNK 430

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R ELA ELLEREL+ H  HA +RM KA+QRDL GDR V+PIEHYLDASIITNGL RAFST
Sbjct: 431 RLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFST 490

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G W HPYKR+ER SGVVA L RTNPLQ  A++R++RQQV YTGKVGDARYPHPSHWGK+C
Sbjct: 491 GHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGKVGDARYPHPSHWGKLC 550

Query: 545 FLSTPDGEN 571
           FLSTPDGEN
Sbjct: 551 FLSTPDGEN 559

[10][TOP]
>UniRef100_Q1L6W5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhododendron
           macrophyllum RepID=Q1L6W5_RHOMC
          Length = 1019

 Score =  293 bits (751), Expect = 5e-78
 Identities = 139/189 (73%), Positives = 159/189 (84%)
 Frame = +2

Query: 5   VKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           ++  ++ P ES+E  L+ YLFP  SG  +KARFL YMVK LL AYTGRRK DNRDDFRNK
Sbjct: 178 IENCKFPPQESIEAFLSNYLFPNLSGFRQKARFLGYMVKCLLQAYTGRRKIDNRDDFRNK 237

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R ELA ELLEREL+VH  HA +RM KA+QRDL G+R +  IEHYLDASIITNGL RAFST
Sbjct: 238 RLELAGELLERELRVHVKHAERRMVKAMQRDLYGERVIHAIEHYLDASIITNGLSRAFST 297

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           GAW+HPYK++ER SGVVA L RTNPLQT+A++R+TRQQV YTGKVGDARYPHPSHWGK+C
Sbjct: 298 GAWSHPYKKMERISGVVATLRRTNPLQTIADMRKTRQQVSYTGKVGDARYPHPSHWGKIC 357

Query: 545 FLSTPDGEN 571
           FLSTPDGEN
Sbjct: 358 FLSTPDGEN 366

[11][TOP]
>UniRef100_Q1L6W3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Antirrhinum majus
           RepID=Q1L6W3_ANTMA
          Length = 821

 Score =  265 bits (678), Expect = 1e-69
 Identities = 125/161 (77%), Positives = 141/161 (87%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KAR L YMVK LL AY GRRK DNRDDFRNKR ELA ELLEREL+VH  HA +RM+KA+
Sbjct: 7   QKARLLGYMVKCLLEAYRGRRKVDNRDDFRNKRLELAGELLERELRVHIKHAERRMTKAM 66

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           QRDL  DR+++ I+ YLDASIITNGL RAFSTGAW+HPYKR+ER SGVVA L RTNPLQT
Sbjct: 67  QRDLYRDREIQSIDSYLDASIITNGLSRAFSTGAWSHPYKRMERISGVVATLRRTNPLQT 126

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGEN 571
           MA++R+TRQQV YTG+VGDARYPHPSHWGK+CFLSTPDGEN
Sbjct: 127 MADMRKTRQQVSYTGRVGDARYPHPSHWGKICFLSTPDGEN 167

[12][TOP]
>UniRef100_Q7XTQ7 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
            RepID=Q7XTQ7_ORYSJ
          Length = 1343

 Score =  262 bits (670), Expect = 1e-68
 Identities = 120/189 (63%), Positives = 151/189 (79%)
 Frame = +2

Query: 5    VKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
            +K  ++ P+E  ++ +  YLFP  SG   KA FL YMVK LL+A+TG+RKCDN+DDFRNK
Sbjct: 480  IKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNK 539

Query: 185  RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
            R +LA ELL REL+ H  HA + M KALQRDLN +R+++  +HYLDASIITNGL RAFST
Sbjct: 540  RLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLDASIITNGLNRAFST 599

Query: 365  GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
            G+W HPYKR ER +G+VA L RTNPLQ +++LR+TRQ+V Y GK GDARYP+PS+WGK+C
Sbjct: 600  GSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDARYPNPSYWGKLC 659

Query: 545  FLSTPDGEN 571
            F+STPDGEN
Sbjct: 660  FMSTPDGEN 668

[13][TOP]
>UniRef100_Q7F9D6 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
            RepID=Q7F9D6_ORYSJ
          Length = 1316

 Score =  262 bits (670), Expect = 1e-68
 Identities = 120/189 (63%), Positives = 151/189 (79%)
 Frame = +2

Query: 5    VKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
            +K  ++ P+E  ++ +  YLFP  SG   KA FL YMVK LL+A+TG+RKCDN+DDFRNK
Sbjct: 453  IKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNK 512

Query: 185  RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
            R +LA ELL REL+ H  HA + M KALQRDLN +R+++  +HYLDASIITNGL RAFST
Sbjct: 513  RLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLDASIITNGLNRAFST 572

Query: 365  GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
            G+W HPYKR ER +G+VA L RTNPLQ +++LR+TRQ+V Y GK GDARYP+PS+WGK+C
Sbjct: 573  GSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDARYPNPSYWGKLC 632

Query: 545  FLSTPDGEN 571
            F+STPDGEN
Sbjct: 633  FMSTPDGEN 641

[14][TOP]
>UniRef100_Q259Y6 DNA-directed RNA polymerase n=1 Tax=Oryza sativa RepID=Q259Y6_ORYSA
          Length = 1343

 Score =  262 bits (670), Expect = 1e-68
 Identities = 120/189 (63%), Positives = 151/189 (79%)
 Frame = +2

Query: 5    VKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
            +K  ++ P+E  ++ +  YLFP  SG   KA FL YMVK LL+A+TG+RKCDN+DDFRNK
Sbjct: 480  IKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNK 539

Query: 185  RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
            R +LA ELL REL+ H  HA + M KALQRDLN +R+++  +HYLDASIITNGL RAFST
Sbjct: 540  RLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLDASIITNGLNRAFST 599

Query: 365  GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
            G+W HPYKR ER +G+VA L RTNPLQ +++LR+TRQ+V Y GK GDARYP+PS+WGK+C
Sbjct: 600  GSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDARYPNPSYWGKLC 659

Query: 545  FLSTPDGEN 571
            F+STPDGEN
Sbjct: 660  FMSTPDGEN 668

[15][TOP]
>UniRef100_Q0J9N2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Oryza sativa
           Japonica Group RepID=Q0J9N2_ORYSJ
          Length = 1270

 Score =  262 bits (670), Expect = 1e-68
 Identities = 120/189 (63%), Positives = 151/189 (79%)
 Frame = +2

Query: 5   VKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           +K  ++ P+E  ++ +  YLFP  SG   KA FL YMVK LL+A+TG+RKCDN+DDFRNK
Sbjct: 407 IKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNK 466

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R +LA ELL REL+ H  HA + M KALQRDLN +R+++  +HYLDASIITNGL RAFST
Sbjct: 467 RLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLDASIITNGLNRAFST 526

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G+W HPYKR ER +G+VA L RTNPLQ +++LR+TRQ+V Y GK GDARYP+PS+WGK+C
Sbjct: 527 GSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDARYPNPSYWGKLC 586

Query: 545 FLSTPDGEN 571
           F+STPDGEN
Sbjct: 587 FMSTPDGEN 595

[16][TOP]
>UniRef100_C5WRS0 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
           RepID=C5WRS0_SORBI
          Length = 1228

 Score =  262 bits (670), Expect = 1e-68
 Identities = 121/189 (64%), Positives = 151/189 (79%)
 Frame = +2

Query: 5   VKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           VK  ++ P+ES ++ +  +LFP  SG   KA FL YMVK LL+A+TG+RKCDN+DDFRNK
Sbjct: 389 VKSSRFPPAESFDDYIARFLFPDISGNRNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNK 448

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R +L  ELL REL+ H   A KRM KA+QRDLN DR+++ +E Y+DASI+TNGL RAFST
Sbjct: 449 RLDLPGELLGRELRAHLRLAEKRMVKAIQRDLNSDRELQDLERYIDASIVTNGLSRAFST 508

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G+W HPYKR ER SG+VA L RTNPLQ M++LR+TRQ+V Y GK GDARYP+PS+WGK+C
Sbjct: 509 GSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQRVAYAGKAGDARYPNPSYWGKLC 568

Query: 545 FLSTPDGEN 571
           F+STPDGEN
Sbjct: 569 FMSTPDGEN 577

[17][TOP]
>UniRef100_B9FCT0 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
           RepID=B9FCT0_ORYSJ
          Length = 1185

 Score =  262 bits (670), Expect = 1e-68
 Identities = 120/189 (63%), Positives = 151/189 (79%)
 Frame = +2

Query: 5   VKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           +K  ++ P+E  ++ +  YLFP  SG   KA FL YMVK LL+A+TG+RKCDN+DDFRNK
Sbjct: 389 IKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNK 448

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R +LA ELL REL+ H  HA + M KALQRDLN +R+++  +HYLDASIITNGL RAFST
Sbjct: 449 RLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLDASIITNGLNRAFST 508

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G+W HPYKR ER +G+VA L RTNPLQ +++LR+TRQ+V Y GK GDARYP+PS+WGK+C
Sbjct: 509 GSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDARYPNPSYWGKLC 568

Query: 545 FLSTPDGEN 571
           F+STPDGEN
Sbjct: 569 FMSTPDGEN 577

[18][TOP]
>UniRef100_B8AV78 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group
           RepID=B8AV78_ORYSI
          Length = 1177

 Score =  262 bits (670), Expect = 1e-68
 Identities = 120/189 (63%), Positives = 151/189 (79%)
 Frame = +2

Query: 5   VKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           +K  ++ P+E  ++ +  YLFP  SG   KA FL YMVK LL+A+TG+RKCDN+DDFRNK
Sbjct: 389 IKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNK 448

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R +LA ELL REL+ H  HA + M KALQRDLN +R+++  +HYLDASIITNGL RAFST
Sbjct: 449 RLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLDASIITNGLNRAFST 508

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G+W HPYKR ER +G+VA L RTNPLQ +++LR+TRQ+V Y GK GDARYP+PS+WGK+C
Sbjct: 509 GSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDARYPNPSYWGKLC 568

Query: 545 FLSTPDGEN 571
           F+STPDGEN
Sbjct: 569 FMSTPDGEN 577

[19][TOP]
>UniRef100_Q07DU9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Zea mays
           RepID=Q07DU9_MAIZE
          Length = 1170

 Score =  259 bits (662), Expect = 1e-67
 Identities = 120/189 (63%), Positives = 150/189 (79%)
 Frame = +2

Query: 5   VKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           VK  ++ P+ES ++ +  +LFP  SG   KA FL YMVK LL+A+TG+RKCDN+DDFRNK
Sbjct: 331 VKSSRFPPAESFDDYIARFLFPDISGNRNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNK 390

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R +L  ELL REL+     A KRM KA+QRDLN DR+++ +E Y+DASI+TNGL RAFST
Sbjct: 391 RLDLPGELLGRELRAQLRLAEKRMVKAIQRDLNSDRELQDLERYIDASIVTNGLNRAFST 450

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G+W HPYKR ER SG+VA L RTNPLQ M++LR+TRQ+V Y GK GDARYP+PS+WGK+C
Sbjct: 451 GSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQRVAYAGKAGDARYPNPSYWGKLC 510

Query: 545 FLSTPDGEN 571
           F+STPDGEN
Sbjct: 511 FMSTPDGEN 519

[20][TOP]
>UniRef100_C5Y8Y9 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
           RepID=C5Y8Y9_SORBI
          Length = 1239

 Score =  255 bits (651), Expect = 2e-66
 Identities = 118/189 (62%), Positives = 149/189 (78%)
 Frame = +2

Query: 5   VKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           VK  ++ P+ES ++ +  +LFP  +G   KA FL YMVK LL+A+TG+RKCDN+DDFRNK
Sbjct: 400 VKSSRFPPAESFDDYVARFLFPDINGNRNKAFFLGYMVKCLLMAFTGKRKCDNKDDFRNK 459

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R +L  ELL REL+       +RM KA+QRDLN DR+++ +E Y+DASI+TNGL RAFST
Sbjct: 460 RLDLPGELLGRELRAQLRLLERRMVKAIQRDLNNDRELQDLERYIDASIVTNGLNRAFST 519

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G+W HPYKR ER SG+VA L RTNPLQ M++LR+TRQ+V Y GK GDARYP+PS+WGK+C
Sbjct: 520 GSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQRVAYAGKAGDARYPNPSYWGKLC 579

Query: 545 FLSTPDGEN 571
           FLSTPDGEN
Sbjct: 580 FLSTPDGEN 588

[21][TOP]
>UniRef100_Q6YYK5 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
           RepID=Q6YYK5_ORYSJ
          Length = 1136

 Score =  244 bits (623), Expect = 3e-63
 Identities = 114/188 (60%), Positives = 145/188 (77%)
 Frame = +2

Query: 5   VKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           ++  ++ P  S +E +  ++FP  SG   KA FL YMV+ LLLA +G RK DNRDDFRNK
Sbjct: 292 IRNTKFPPKGSFDEYIGRHMFPDVSGNRSKALFLGYMVRCLLLASSGNRKSDNRDDFRNK 351

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R +LA ELL+REL VH  HA+KRM K +QR L+GD D++P+E Y+ ASI+TNGL RAFST
Sbjct: 352 RLDLACELLQRELWVHIMHAQKRMVKVMQRHLSGDGDLQPLECYVHASIVTNGLNRAFST 411

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G+W HP+ + ER SG+VA L RTNPLQ M+++R+TRQ V Y GK GDARYP+PS+WGK+C
Sbjct: 412 GSWCHPFNKRERCSGIVATLRRTNPLQMMSDMRKTRQWVAYAGKAGDARYPNPSYWGKLC 471

Query: 545 FLSTPDGE 568
           FLSTPDGE
Sbjct: 472 FLSTPDGE 479

[22][TOP]
>UniRef100_A3BQ32 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
           RepID=A3BQ32_ORYSJ
          Length = 1257

 Score =  244 bits (623), Expect = 3e-63
 Identities = 114/188 (60%), Positives = 145/188 (77%)
 Frame = +2

Query: 5   VKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           ++  ++ P  S +E +  ++FP  SG   KA FL YMV+ LLLA +G RK DNRDDFRNK
Sbjct: 413 IRNTKFPPKGSFDEYIGRHMFPDVSGNRSKALFLGYMVRCLLLASSGNRKSDNRDDFRNK 472

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R +LA ELL+REL VH  HA+KRM K +QR L+GD D++P+E Y+ ASI+TNGL RAFST
Sbjct: 473 RLDLACELLQRELWVHIMHAQKRMVKVMQRHLSGDGDLQPLECYVHASIVTNGLNRAFST 532

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G+W HP+ + ER SG+VA L RTNPLQ M+++R+TRQ V Y GK GDARYP+PS+WGK+C
Sbjct: 533 GSWCHPFNKRERCSGIVATLRRTNPLQMMSDMRKTRQWVAYAGKAGDARYPNPSYWGKLC 592

Query: 545 FLSTPDGE 568
           FLSTPDGE
Sbjct: 593 FLSTPDGE 600

[23][TOP]
>UniRef100_C5YHJ3 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
           RepID=C5YHJ3_SORBI
          Length = 1251

 Score =  233 bits (595), Expect = 6e-60
 Identities = 113/188 (60%), Positives = 141/188 (75%)
 Frame = +2

Query: 5   VKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           ++  ++ P ES +E +  Y+FP  +G+  KA FL YMVK LL+AY+G RKCDN+DDFRNK
Sbjct: 409 IRKSKFPPKESFDEYVCRYMFPSVNGVRSKALFLGYMVKCLLMAYSGNRKCDNKDDFRNK 468

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R  LA +LL REL  H   A  RM K +QRDL+ D +++ +  Y+DASIITNGL RAFST
Sbjct: 469 RLGLACQLLRRELWTHIKRAEWRMVKLMQRDLSNDGNLQDLRRYVDASIITNGLNRAFST 528

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G+W HPY +  R SGVVA L RTNPLQ M++LR+TRQ V Y+G VGDARYP+PS WGK+C
Sbjct: 529 GSWRHPYLK-ARCSGVVATLRRTNPLQMMSDLRKTRQWVAYSGAVGDARYPNPSFWGKLC 587

Query: 545 FLSTPDGE 568
           FLSTPDGE
Sbjct: 588 FLSTPDGE 595

[24][TOP]
>UniRef100_A2YRP1 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group
            RepID=A2YRP1_ORYSI
          Length = 1347

 Score =  209 bits (533), Expect = 9e-53
 Identities = 99/171 (57%), Positives = 128/171 (74%)
 Frame = +2

Query: 5    VKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
            ++  ++ P  S +E +  ++FP  SG   KA FL YMV+ LLLA +G RK DNRDDFRNK
Sbjct: 508  IRNTKFPPKGSFDEYIGRHMFPDVSGNRSKALFLGYMVRCLLLASSGNRKSDNRDDFRNK 567

Query: 185  RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
            R +LA ELL+REL VH  HA+KRM K +QR L+GD D++P+E Y+ ASI+TNGL RAFST
Sbjct: 568  RLDLACELLQRELWVHIMHAQKRMVKVMQRHLSGDGDLQPLECYVHASIVTNGLNRAFST 627

Query: 365  GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYP 517
            G+W HP+ + ER SG++A L RTNPLQ M+++R+TRQ V Y GK GDARYP
Sbjct: 628  GSWCHPFNKRERCSGIIATLRRTNPLQMMSDMRKTRQWVAYAGKAGDARYP 678

[25][TOP]
>UniRef100_A9RJY4 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
           patens RepID=A9RJY4_PHYPA
          Length = 906

 Score =  113 bits (282), Expect = 1e-23
 Identities = 64/182 (35%), Positives = 103/182 (56%), Gaps = 5/182 (2%)
 Frame = +2

Query: 41  EEC----LNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAEL 208
           EEC    LNL       G  +KA FL YM++ + LA  GR   D+++ ++NKR +LA +L
Sbjct: 79  EECGRDVLNLMFHHIGQGYKQKAYFLGYMIRQICLARLGRCPEDDKEHYKNKRLDLAGQL 138

Query: 209 LERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYK 388
           L  + +   AH ++ M K LQ+ L  +  +  I+ ++  SIIT  LQ AF+ G W     
Sbjct: 139 LRHQFRAAMAHLQRDMQKQLQKHLGKEDSLGSIKTFVQESIITKNLQGAFTLGNWN--TS 196

Query: 389 RLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGK-VGDARYPHPSHWGKVCFLSTPDG 565
             +R+SGVV ++ RTN +  ++ LR+ R  +    +    AR+P+ S+W +VC + T DG
Sbjct: 197 EGQRSSGVVGDIKRTNTIAMISHLRQLRLNLPPKSRPTESARHPNFSYWARVCPVQTTDG 256

Query: 566 EN 571
           ++
Sbjct: 257 DD 258

[26][TOP]
>UniRef100_A9CSV4 DNA-directed RNA polymerase n=1 Tax=Enterocytozoon bieneusi H348
           RepID=A9CSV4_ENTBH
          Length = 1138

 Score =  110 bits (276), Expect = 6e-23
 Identities = 59/159 (37%), Positives = 87/159 (54%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YM+  +LL  TG+R  D+RD +  KR +L+  LL    KV F       +K L
Sbjct: 343 KKAYFLGYMINKILLVITGKRDVDDRDHYGKKRMDLSGPLLANLFKVLFKKLLTETTKYL 402

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ +  +R+   +   L +SIIT G + A +TG W H  K +   +GV   L R N L T
Sbjct: 403 QKCVENNREFN-LTIGLKSSIITQGFKYALATGNWGHQEKAMSTRAGVAQVLSRYNFLST 461

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    ++  GK+   R  H +HWG +C + TP+G
Sbjct: 462 LSHLRRVNTPIEKEGKLAAPRQLHNTHWGMICPIETPEG 500

[27][TOP]
>UniRef100_A9TK27 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
           patens RepID=A9TK27_PHYPA
          Length = 1238

 Score =  109 bits (273), Expect = 1e-22
 Identities = 61/163 (37%), Positives = 92/163 (56%), Gaps = 1/163 (0%)
 Frame = +2

Query: 80  GLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMS 259
           G  RKA  L YMV  L   + GRR  D++D F+NKR +L  +LL  + +   AH  + + 
Sbjct: 425 GYTRKAMLLGYMVNQLCSTFLGRRLEDDKDHFKNKRLDLTGQLLSHQFRKAMAHLERDVK 484

Query: 260 KALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNP 439
           + L   L   RD+ P++ Y+  +I+T  +Q AF+ G W        ++SGVVA L R NP
Sbjct: 485 RRLHPYLVKGRDLAPLKTYVTEAIVTKQMQSAFTLGNWN--TNEGLKSSGVVAVLKRMNP 542

Query: 440 LQTMAELRRTRQQVQYTGKVGD-ARYPHPSHWGKVCFLSTPDG 565
           + T++ LR+ R  +    K  D AR+P+ S+WG++C   T DG
Sbjct: 543 MATLSHLRQFRLNLPPPMKPTDPARHPNYSYWGRICPTQTSDG 585

[28][TOP]
>UniRef100_Q5ARG0 DNA-directed RNA polymerase n=1 Tax=Emericella nidulans
           RepID=Q5ARG0_EMENI
          Length = 1028

 Score =  109 bits (272), Expect = 2e-22
 Identities = 66/189 (34%), Positives = 95/189 (50%)
 Frame = +2

Query: 2   HVKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRN 181
           H + ++Y   E M++ L  ++        RKA FL YMV  LL    GRR  D+RD F  
Sbjct: 139 HERRVRYA-REIMQKELLPHISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGK 197

Query: 182 KRFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFS 361
           KR +LA  LL    +V F    + + + +QR +  DR++  +   L AS +T GL+ A +
Sbjct: 198 KRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVESDREIY-LNVGLKASTVTQGLRYALA 256

Query: 362 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 541
           TG W    K     +GV   L R     T++ LRRT   +   GK+   R  H +HWG V
Sbjct: 257 TGNWGEQKKAASAKAGVSQVLSRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLV 316

Query: 542 CFLSTPDGE 568
           C   TP+G+
Sbjct: 317 CPAETPEGQ 325

[29][TOP]
>UniRef100_C8VK81 DNA-directed RNA polymerase (EC 2.7.7.6)
           [Source:UniProtKB/TrEMBL;Acc:Q9UV95] n=2 Tax=Emericella
           nidulans RepID=C8VK81_EMENI
          Length = 1252

 Score =  109 bits (272), Expect = 2e-22
 Identities = 66/189 (34%), Positives = 95/189 (50%)
 Frame = +2

Query: 2   HVKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRN 181
           H + ++Y   E M++ L  ++        RKA FL YMV  LL    GRR  D+RD F  
Sbjct: 363 HERRVRYA-REIMQKELLPHISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGK 421

Query: 182 KRFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFS 361
           KR +LA  LL    +V F    + + + +QR +  DR++  +   L AS +T GL+ A +
Sbjct: 422 KRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVESDREIY-LNVGLKASTVTQGLRYALA 480

Query: 362 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 541
           TG W    K     +GV   L R     T++ LRRT   +   GK+   R  H +HWG V
Sbjct: 481 TGNWGEQKKAASAKAGVSQVLSRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLV 540

Query: 542 CFLSTPDGE 568
           C   TP+G+
Sbjct: 541 CPAETPEGQ 549

[30][TOP]
>UniRef100_Q9UV85 DNA-directed RNA polymerase (Fragment) n=1 Tax=Curvularia
           brachyspora RepID=Q9UV85_9PLEO
          Length = 942

 Score =  106 bits (264), Expect = 1e-21
 Identities = 62/160 (38%), Positives = 84/160 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA F  YM+  LL    GRR  D+RD F  KR +LA  L+    ++ F    K + K L
Sbjct: 170 RKAYFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLAGPLIANLFRILFLKLTKDVYKYL 229

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           QR +  ++D   ++  + ASIITNGL+ + +TG W    K     +GV   L R     T
Sbjct: 230 QRCVENNQDFN-VQMAVKASIITNGLKYSLATGNWGDQKKAASAKAGVSQVLNRYTYAST 288

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   V   GK+   R  H SHWG VC   TP+G+
Sbjct: 289 LSHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETPEGQ 328

[31][TOP]
>UniRef100_Q9UV84 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pleospora herbarum
           RepID=Q9UV84_9PLEO
          Length = 942

 Score =  106 bits (264), Expect = 1e-21
 Identities = 62/160 (38%), Positives = 84/160 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA F  YM+  LL    GRR  D+RD F  KR +LA  L+    ++ F    K + K L
Sbjct: 170 RKAYFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLAGPLIANLFRILFLKLTKDVYKYL 229

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           QR +  ++D   ++  + ASIITNGL+ + +TG W    K     +GV   L R     T
Sbjct: 230 QRCVENNQDFN-VQMAVKASIITNGLKYSLATGNWGDQKKAASAKAGVSQVLNRYTYAST 288

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   V   GK+   R  H SHWG VC   TP+G+
Sbjct: 289 LSHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETPEGQ 328

[32][TOP]
>UniRef100_Q6RYH7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dermatocarpon
           reticulatum RepID=Q6RYH7_9EURO
          Length = 907

 Score =  105 bits (262), Expect = 2e-21
 Identities = 58/167 (34%), Positives = 90/167 (53%)
 Frame = +2

Query: 68  PGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHAR 247
           P +S  +RKA FL YMV  +L    GR + D+RD    KR +LA  L+    ++ F    
Sbjct: 166 PSNSSQSRKAFFLGYMVNRMLKCALGRSEPDDRDHLGKKRLDLAGPLMANLFRLQFQKVV 225

Query: 248 KRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLG 427
           +  S+ +Q+ +  DR++  ++  L ++IITNGL+ + +TG W    K  +  +GV   L 
Sbjct: 226 RDFSRYMQKQVESDREIN-LKVGLKSNIITNGLKYSLATGNWGDQKKVNQAKAGVSQVLS 284

Query: 428 RTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           R     T++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 285 RYTFASTLSHLRRTNAPIGRDGKIAKPRQLHNTHWGYVCPAETPEGQ 331

[33][TOP]
>UniRef100_Q0CWW4 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
           RepID=Q0CWW4_ASPTN
          Length = 1256

 Score =  105 bits (262), Expect = 2e-21
 Identities = 64/189 (33%), Positives = 95/189 (50%)
 Frame = +2

Query: 2   HVKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRN 181
           H + ++Y   E M++ L  ++        RKA FL YMV  LL    GRR  D+RD F  
Sbjct: 365 HERRVRYA-REIMQKELLPHISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGK 423

Query: 182 KRFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFS 361
           KR +LA  LL    +V F    + + + +QR +  +R++  +   + AS +T GL+ A +
Sbjct: 424 KRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNREIY-LNIGIKASTLTGGLKYALA 482

Query: 362 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 541
           TG W    K     +GV   L R     T++ LRRT   +   GK+   R  H +HWG V
Sbjct: 483 TGNWGEQKKAASAKAGVSQVLSRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLV 542

Query: 542 CFLSTPDGE 568
           C   TP+G+
Sbjct: 543 CPAETPEGQ 551

[34][TOP]
>UniRef100_B8NK59 DNA-directed RNA polymerase n=2 Tax=Aspergillus RepID=B8NK59_ASPFN
          Length = 1254

 Score =  105 bits (262), Expect = 2e-21
 Identities = 64/189 (33%), Positives = 95/189 (50%)
 Frame = +2

Query: 2   HVKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRN 181
           H + ++Y   E M++ L  ++        RKA FL YMV  LL    GRR  D+RD F  
Sbjct: 364 HERRVRYA-REIMQKELLPHISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGK 422

Query: 182 KRFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFS 361
           KR +LA  LL    +V F    + + + +QR +  +R++  +   + AS +T GL+ A +
Sbjct: 423 KRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNREIY-LNIGIKASTLTGGLKYALA 481

Query: 362 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 541
           TG W    K     +GV   L R     T++ LRRT   +   GK+   R  H +HWG V
Sbjct: 482 TGNWGEQKKAASAKAGVSQVLSRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLV 541

Query: 542 CFLSTPDGE 568
           C   TP+G+
Sbjct: 542 CPAETPEGQ 550

[35][TOP]
>UniRef100_B0YC08 DNA-directed RNA polymerase n=3 Tax=Aspergillus fumigatus
           RepID=B0YC08_ASPFC
          Length = 1255

 Score =  105 bits (262), Expect = 2e-21
 Identities = 64/189 (33%), Positives = 95/189 (50%)
 Frame = +2

Query: 2   HVKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRN 181
           H + ++Y   E M++ L  ++        RKA FL YMV  LL    GRR  D+RD F  
Sbjct: 366 HERRVRYA-REIMQKELLPHISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGK 424

Query: 182 KRFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFS 361
           KR +LA  LL    +V F    + + + +QR +  +R++  +   + AS +T GL+ A +
Sbjct: 425 KRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNREIY-LNIGIKASTLTGGLKYALA 483

Query: 362 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 541
           TG W    K     +GV   L R     T++ LRRT   +   GK+   R  H +HWG V
Sbjct: 484 TGNWGEQKKAASSKAGVSQVLSRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLV 543

Query: 542 CFLSTPDGE 568
           C   TP+G+
Sbjct: 544 CPAETPEGQ 552

[36][TOP]
>UniRef100_A1D971 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
           RepID=A1D971_NEOFI
          Length = 1255

 Score =  105 bits (262), Expect = 2e-21
 Identities = 64/189 (33%), Positives = 95/189 (50%)
 Frame = +2

Query: 2   HVKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRN 181
           H + ++Y   E M++ L  ++        RKA FL YMV  LL    GRR  D+RD F  
Sbjct: 366 HERRVRYA-REIMQKELLPHISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGK 424

Query: 182 KRFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFS 361
           KR +LA  LL    +V F    + + + +QR +  +R++  +   + AS +T GL+ A +
Sbjct: 425 KRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNREIY-LNIGIKASTLTGGLKYALA 483

Query: 362 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 541
           TG W    K     +GV   L R     T++ LRRT   +   GK+   R  H +HWG V
Sbjct: 484 TGNWGEQKKAASSKAGVSQVLSRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLV 543

Query: 542 CFLSTPDGE 568
           C   TP+G+
Sbjct: 544 CPAETPEGQ 552

[37][TOP]
>UniRef100_A1CG49 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
           RepID=A1CG49_ASPCL
          Length = 1257

 Score =  105 bits (261), Expect = 3e-21
 Identities = 64/189 (33%), Positives = 95/189 (50%)
 Frame = +2

Query: 2   HVKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRN 181
           H + ++Y   E M++ L  ++        RKA FL YMV  LL    GRR  D+RD F  
Sbjct: 366 HERRVRYA-REIMQKELLPHISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGK 424

Query: 182 KRFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFS 361
           KR +LA  LL    +V F    + + + +QR +  +R++  +   + AS +T GL+ A +
Sbjct: 425 KRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNREIY-LNIGIKASTLTGGLKYALA 483

Query: 362 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 541
           TG W    K     +GV   L R     T++ LRRT   +   GK+   R  H +HWG V
Sbjct: 484 TGNWGEQKKAASSKAGVSQVLSRYTYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLV 543

Query: 542 CFLSTPDGE 568
           C   TP+G+
Sbjct: 544 CPAETPEGQ 552

[38][TOP]
>UniRef100_Q9UV87 DNA-directed RNA polymerase (Fragment) n=1 Tax=Didymella bryoniae
           RepID=Q9UV87_9PLEO
          Length = 940

 Score =  104 bits (260), Expect = 4e-21
 Identities = 61/160 (38%), Positives = 83/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA F  YM+  +L    GRR  D+RD F  KR +LA  L+    ++ F    K + K L
Sbjct: 169 RKAYFFGYMIHRMLQCVLGRRDEDDRDHFGKKRLDLAGPLIANLFRILFLKLTKDVYKYL 228

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           QR +  + D   ++  + ASIITNGL+ + +TG W    K     +GV   L R     T
Sbjct: 229 QRCVENNSDFN-VQMAVKASIITNGLKYSLATGNWGDQKKAASAKAGVSQVLNRYTYAST 287

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   V   GK+   R  H SHWG VC   TP+G+
Sbjct: 288 LSHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETPEGQ 327

[39][TOP]
>UniRef100_Q2VA54 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum
           RepID=Q2VA54_PHANO
          Length = 1262

 Score =  104 bits (260), Expect = 4e-21
 Identities = 62/160 (38%), Positives = 82/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA F  YM+  LL    GRR  D+RD F  KR +LA  L+    ++ F    K + K L
Sbjct: 393 RKAYFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLAGPLVANLFRILFLKLTKDVFKYL 452

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           QR +    D   ++  + ASIITNGL+ + +TG W    K     +GV   L R     T
Sbjct: 453 QRCVESSTDFN-VQMAVKASIITNGLKYSLATGNWGDQKKAASAKAGVSQVLNRYTYAST 511

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   V   GK+   R  H SHWG VC   TP+G+
Sbjct: 512 LSHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETPEGQ 551

[40][TOP]
>UniRef100_Q1HDK3 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria sp. S-93-48
           RepID=Q1HDK3_9PLEO
          Length = 1262

 Score =  104 bits (260), Expect = 4e-21
 Identities = 62/160 (38%), Positives = 82/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA F  YM+  LL    GRR  D+RD F  KR +LA  L+    ++ F    K + K L
Sbjct: 393 RKAYFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLAGPLVANLFRILFLKLTKDVFKYL 452

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           QR +    D   ++  + ASIITNGL+ + +TG W    K     +GV   L R     T
Sbjct: 453 QRCVESSTDFN-VQMAVKASIITNGLKYSLATGNWGDQKKAASAKAGVSQVLNRYTYAST 511

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   V   GK+   R  H SHWG VC   TP+G+
Sbjct: 512 LSHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETPEGQ 551

[41][TOP]
>UniRef100_Q1HDK2 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria avenaria f. sp.
           triticae RepID=Q1HDK2_9PLEO
          Length = 1262

 Score =  104 bits (260), Expect = 4e-21
 Identities = 62/160 (38%), Positives = 82/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA F  YM+  LL    GRR  D+RD F  KR +LA  L+    ++ F    K + K L
Sbjct: 393 RKAYFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLAGPLVANLFRILFLKLTKDVFKYL 452

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           QR +    D   ++  + ASIITNGL+ + +TG W    K     +GV   L R     T
Sbjct: 453 QRCVESSTDFN-VQMAVKASIITNGLKYSLATGNWGDQKKAASAKAGVSQVLNRYTYAST 511

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   V   GK+   R  H SHWG VC   TP+G+
Sbjct: 512 LSHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETPEGQ 551

[42][TOP]
>UniRef100_Q1HDK1 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria avenaria f. sp.
           triticae RepID=Q1HDK1_9PLEO
          Length = 1262

 Score =  104 bits (260), Expect = 4e-21
 Identities = 62/160 (38%), Positives = 82/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA F  YM+  LL    GRR  D+RD F  KR +LA  L+    ++ F    K + K L
Sbjct: 393 RKAYFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLAGPLVANLFRILFLKLTKDVFKYL 452

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           QR +    D   ++  + ASIITNGL+ + +TG W    K     +GV   L R     T
Sbjct: 453 QRCVESSTDFN-VQMAVKASIITNGLKYSLATGNWGDQKKAASAKAGVSQVLNRYTYAST 511

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   V   GK+   R  H SHWG VC   TP+G+
Sbjct: 512 LSHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETPEGQ 551

[43][TOP]
>UniRef100_Q1HDJ9 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria avenaria f. sp.
           triticae RepID=Q1HDJ9_9PLEO
          Length = 1262

 Score =  104 bits (260), Expect = 4e-21
 Identities = 62/160 (38%), Positives = 82/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA F  YM+  LL    GRR  D+RD F  KR +LA  L+    ++ F    K + K L
Sbjct: 393 RKAYFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLAGPLVANLFRILFLKLTKDVFKYL 452

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           QR +    D   ++  + ASIITNGL+ + +TG W    K     +GV   L R     T
Sbjct: 453 QRCVESSTDFN-VQMAVKASIITNGLKYSLATGNWGDQKKAASAKAGVSQVLNRYTYAST 511

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   V   GK+   R  H SHWG VC   TP+G+
Sbjct: 512 LSHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETPEGQ 551

[44][TOP]
>UniRef100_Q1HDJ8 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum
           RepID=Q1HDJ8_PHANO
          Length = 1262

 Score =  104 bits (260), Expect = 4e-21
 Identities = 62/160 (38%), Positives = 82/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA F  YM+  LL    GRR  D+RD F  KR +LA  L+    ++ F    K + K L
Sbjct: 393 RKAYFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLAGPLVANLFRILFLKLTKDVFKYL 452

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           QR +    D   ++  + ASIITNGL+ + +TG W    K     +GV   L R     T
Sbjct: 453 QRCVESSTDFN-VQMAVKASIITNGLKYSLATGNWGDQKKAASAKAGVSQVLNRYTYAST 511

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   V   GK+   R  H SHWG VC   TP+G+
Sbjct: 512 LSHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETPEGQ 551

[45][TOP]
>UniRef100_Q1HDI7 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria avenaria f. sp.
           avenaria RepID=Q1HDI7_9PLEO
          Length = 1262

 Score =  104 bits (260), Expect = 4e-21
 Identities = 62/160 (38%), Positives = 82/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA F  YM+  LL    GRR  D+RD F  KR +LA  L+    ++ F    K + K L
Sbjct: 393 RKAYFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLAGPLVANLFRILFLKLTKDVFKYL 452

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           QR +    D   ++  + ASIITNGL+ + +TG W    K     +GV   L R     T
Sbjct: 453 QRCVESSTDFN-VQMAVKASIITNGLKYSLATGNWGDQKKAASAKAGVSQVLNRYTYAST 511

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   V   GK+   R  H SHWG VC   TP+G+
Sbjct: 512 LSHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETPEGQ 551

[46][TOP]
>UniRef100_Q1HDI5 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria avenaria f. sp.
           avenaria RepID=Q1HDI5_9PLEO
          Length = 1262

 Score =  104 bits (260), Expect = 4e-21
 Identities = 62/160 (38%), Positives = 82/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA F  YM+  LL    GRR  D+RD F  KR +LA  L+    ++ F    K + K L
Sbjct: 393 RKAYFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLAGPLVANLFRILFLKLTKDVFKYL 452

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           QR +    D   ++  + ASIITNGL+ + +TG W    K     +GV   L R     T
Sbjct: 453 QRCVESSTDFN-VQMAVKASIITNGLKYSLATGNWGDQKKAASAKAGVSQVLNRYTYAST 511

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   V   GK+   R  H SHWG VC   TP+G+
Sbjct: 512 LSHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETPEGQ 551

[47][TOP]
>UniRef100_C4JKI6 DNA-directed RNA polymerase II 138 kDa polypeptide n=1
           Tax=Uncinocarpus reesii 1704 RepID=C4JKI6_UNCRE
          Length = 884

 Score =  104 bits (259), Expect = 5e-21
 Identities = 66/189 (34%), Positives = 93/189 (49%)
 Frame = +2

Query: 2   HVKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRN 181
           H K ++Y      +E L  ++        RKA FL YMV  LL    GRR  D+RD F  
Sbjct: 367 HEKRVRYARDIIQKEFLP-HISQSEGSETRKAFFLGYMVHKLLQCALGRRDVDDRDHFGK 425

Query: 182 KRFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFS 361
           KR +LA  LL    +V F    K + K +QR +  +R +  ++  + AS +T GL+ A +
Sbjct: 426 KRLDLAGPLLANLFRVLFMRLTKDLYKYVQRCVETNRQLY-LKIGVKASTLTGGLKYALA 484

Query: 362 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 541
           TG W    K     +GV   L R     T++ LRRT   +   GK+   R  H +HWG V
Sbjct: 485 TGNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLV 544

Query: 542 CFLSTPDGE 568
           C   TP+G+
Sbjct: 545 CPAETPEGQ 553

[48][TOP]
>UniRef100_B2W4R0 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis
           Pt-1C-BFP RepID=B2W4R0_PYRTR
          Length = 1208

 Score =  104 bits (259), Expect = 5e-21
 Identities = 61/160 (38%), Positives = 83/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA F  YM+  LL    GRR  D+RD F  KR +LA  L+    ++ F    K + K L
Sbjct: 393 RKAYFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLAGPLIANLFRILFLKLTKDVYKYL 452

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           QR +  ++D   ++  + AS ITNGL+ + +TG W    K     +GV   L R     T
Sbjct: 453 QRCVENNQDFN-VQMAVKASTITNGLKYSLATGNWGDQKKAASAKAGVSQVLNRYTYAST 511

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   V   GK+   R  H SHWG VC   TP+G+
Sbjct: 512 LSHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETPEGQ 551

[49][TOP]
>UniRef100_Q6QN96 DNA-directed RNA polymerase n=1 Tax=Cochliobolus heterostrophus
           RepID=Q6QN96_COCHE
          Length = 1208

 Score =  103 bits (258), Expect = 7e-21
 Identities = 61/160 (38%), Positives = 83/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA F  YM+  LL    GRR  D+RD F  KR +LA  L+    ++ F    K + K L
Sbjct: 393 RKAYFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLAGPLIANLFRILFLKLTKDVYKYL 452

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           QR +  ++D   ++  + ASIITNGL+ + +TG W          +GV   L R     T
Sbjct: 453 QRCVENNQDFN-VQMAVKASIITNGLKYSLATGNWGDQKXAASAXAGVSQVLNRYTYAST 511

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   V   GK+   R  H SHWG VC   TP+G+
Sbjct: 512 LSHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETPEGQ 551

[50][TOP]
>UniRef100_Q1DPF0 DNA-directed RNA polymerase n=1 Tax=Coccidioides immitis
           RepID=Q1DPF0_COCIM
          Length = 1152

 Score =  103 bits (258), Expect = 7e-21
 Identities = 66/189 (34%), Positives = 92/189 (48%)
 Frame = +2

Query: 2   HVKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRN 181
           H K ++Y      +E L  ++        RKA FL YMV  LL    GRR  D+RD F  
Sbjct: 315 HEKRVRYARDIIQKEFLP-HISQSEGSETRKAFFLGYMVHKLLQCALGRRDVDDRDHFGK 373

Query: 182 KRFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFS 361
           KR +LA  LL    +V F    K + K +QR +  +R +  +   + AS +T GL+ A +
Sbjct: 374 KRLDLAGPLLANLFRVLFMRLTKDLYKYVQRCVETNRQLY-LNIGVKASTLTGGLKYALA 432

Query: 362 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 541
           TG W    K     +GV   L R     T++ LRRT   +   GK+   R  H +HWG V
Sbjct: 433 TGNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLV 492

Query: 542 CFLSTPDGE 568
           C   TP+G+
Sbjct: 493 CPAETPEGQ 501

[51][TOP]
>UniRef100_C5PAW2 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735
           delta SOWgp RepID=C5PAW2_COCP7
          Length = 1258

 Score =  103 bits (258), Expect = 7e-21
 Identities = 66/189 (34%), Positives = 92/189 (48%)
 Frame = +2

Query: 2   HVKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRN 181
           H K ++Y      +E L  ++        RKA FL YMV  LL    GRR  D+RD F  
Sbjct: 368 HEKRVRYARDIIQKEFLP-HISQSEGSETRKAFFLGYMVHKLLQCALGRRDVDDRDHFGK 426

Query: 182 KRFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFS 361
           KR +LA  LL    +V F    K + K +QR +  +R +  +   + AS +T GL+ A +
Sbjct: 427 KRLDLAGPLLANLFRVLFMRLTKDLYKYVQRCVETNRQLY-LNIGVKASTLTGGLKYALA 485

Query: 362 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 541
           TG W    K     +GV   L R     T++ LRRT   +   GK+   R  H +HWG V
Sbjct: 486 TGNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLV 545

Query: 542 CFLSTPDGE 568
           C   TP+G+
Sbjct: 546 CPAETPEGQ 554

[52][TOP]
>UniRef100_A2QYC2 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
           RepID=A2QYC2_ASPNC
          Length = 1256

 Score =  103 bits (258), Expect = 7e-21
 Identities = 63/189 (33%), Positives = 93/189 (49%)
 Frame = +2

Query: 2   HVKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRN 181
           H + ++Y      +E L  ++        RKA FL YMV  LL    GRR  D+RD F  
Sbjct: 365 HERRVRYAREIMQKEFLP-HISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGK 423

Query: 182 KRFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFS 361
           KR +LA  LL    +V F    + + + +QR +  +R++  +   + AS +T GL+ A +
Sbjct: 424 KRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNREIY-LNIGIKASTLTGGLKYALA 482

Query: 362 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 541
           TG W    K     +GV   L R     T++ LRRT   +   GK+   R  H +HWG V
Sbjct: 483 TGNWGEQKKAASAKAGVSQVLSRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLV 542

Query: 542 CFLSTPDGE 568
           C   TP+G+
Sbjct: 543 CPAETPEGQ 551

[53][TOP]
>UniRef100_A1YID7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Catenaria
           anguillulae RepID=A1YID7_9FUNG
          Length = 892

 Score =  102 bits (254), Expect = 2e-20
 Identities = 58/160 (36%), Positives = 82/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA F+ YMV  +LLA  GRR  D+RD F  KR +LA  LL    K  F+   K +++  
Sbjct: 158 RKAWFIGYMVHRMLLAALGRRPIDDRDHFGKKRLDLAGPLLASLFKTFFSKFVKDITREF 217

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
            + +   +    +   +   IITNGL+ A +TG W    K +E  +GV   L R     T
Sbjct: 218 TKSIERSQGPFHLASVVKPGIITNGLRYALATGNWGDQKKFMETRAGVSQVLNRYTFAST 277

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 278 LSHLRRLNTPIGREGKLAKPRQLHNTHWGMVCPAETPEGQ 317

[54][TOP]
>UniRef100_A1YID3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glomus mosseae
           RepID=A1YID3_GLOMO
          Length = 883

 Score =  102 bits (254), Expect = 2e-20
 Identities = 59/160 (36%), Positives = 87/160 (54%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LLLA  GRR+ D+RD +  KR +LA  LL    ++ F    K +S  L
Sbjct: 161 RKAFFLGYMVHRLLLAALGRRELDDRDHYGKKRMDLAGPLLASLFRMLFKKLTKDVSIYL 220

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           ++ ++ +R+   +   + A  ITNGL+ + +TG W    K ++  +GV   L R     T
Sbjct: 221 RKCIDSNREFN-LNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFAST 279

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 280 LSHLRRCNTPMGRDGKIAKPRQLHNTHWGMVCPAETPEGQ 319

[55][TOP]
>UniRef100_A1YID2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glomus mosseae
           RepID=A1YID2_GLOMO
          Length = 883

 Score =  102 bits (254), Expect = 2e-20
 Identities = 59/160 (36%), Positives = 87/160 (54%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LLLA  GRR+ D+RD +  KR +LA  LL    ++ F    K +S  L
Sbjct: 161 RKAFFLGYMVHRLLLAALGRRELDDRDHYGKKRMDLAGPLLASLFRMLFKKLTKDVSIYL 220

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           ++ ++ +R+   +   + A  ITNGL+ + +TG W    K ++  +GV   L R     T
Sbjct: 221 RKCIDSNREFN-LNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFAST 279

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 280 LSHLRRCNTPMGRDGKIAKPRQLHNTHWGMVCPAETPEGQ 319

[56][TOP]
>UniRef100_Q6RYH5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Diploschistes
           muscorum RepID=Q6RYH5_9LECA
          Length = 901

 Score =  102 bits (253), Expect = 3e-20
 Identities = 59/160 (36%), Positives = 86/160 (53%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  +L    GRR+ D+RD F  KR +LA  L+    +  F    K + K L
Sbjct: 168 RKAFFLGYMVHRMLQVALGRREPDDRDHFGKKRLDLAGPLMASLFRSLFNRLTKDVLKYL 227

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ + G+RD   I   + ++ +TNGL+ + +TG W+   K  +  +GV   L R     T
Sbjct: 228 QKCIEGNRDFN-IALGVKSTTLTNGLKYSLATGNWSEQKKAAQGKAGVSQVLNRYTFAST 286

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 287 LSHLRRTNTPLGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 326

[57][TOP]
>UniRef100_C5JQR0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis
           SLH14081 RepID=C5JQR0_AJEDS
          Length = 1258

 Score =  102 bits (253), Expect = 3e-20
 Identities = 64/189 (33%), Positives = 92/189 (48%)
 Frame = +2

Query: 2   HVKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRN 181
           H K ++Y      +E L  ++        RKA FL YMV  LL    GRR  D+RD F  
Sbjct: 367 HEKRVRYARDIIQKEFLP-HISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGK 425

Query: 182 KRFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFS 361
           KR +LA  LL    ++ F    K + K +QR +  +R +  +   + AS ++ GL+ A +
Sbjct: 426 KRLDLAGPLLANLFRILFMRVTKDLYKYVQRCVETNRQLY-LNIGVKASTLSGGLKYALA 484

Query: 362 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 541
           TG W    K     +GV   L R     T++ LRRT   +   GK+   R  H +HWG V
Sbjct: 485 TGNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLV 544

Query: 542 CFLSTPDGE 568
           C   TP+G+
Sbjct: 545 CPAETPEGQ 553

[58][TOP]
>UniRef100_C5GBN2 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis ER-3
           RepID=C5GBN2_AJEDR
          Length = 1258

 Score =  102 bits (253), Expect = 3e-20
 Identities = 64/189 (33%), Positives = 92/189 (48%)
 Frame = +2

Query: 2   HVKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRN 181
           H K ++Y      +E L  ++        RKA FL YMV  LL    GRR  D+RD F  
Sbjct: 367 HEKRVRYARDIIQKEFLP-HISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGK 425

Query: 182 KRFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFS 361
           KR +LA  LL    ++ F    K + K +QR +  +R +  +   + AS ++ GL+ A +
Sbjct: 426 KRLDLAGPLLANLFRILFMRVTKDLYKYVQRCVETNRQLY-LNIGVKASTLSGGLKYALA 484

Query: 362 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 541
           TG W    K     +GV   L R     T++ LRRT   +   GK+   R  H +HWG V
Sbjct: 485 TGNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLV 544

Query: 542 CFLSTPDGE 568
           C   TP+G+
Sbjct: 545 CPAETPEGQ 553

[59][TOP]
>UniRef100_C1H7W3 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
           Pb01 RepID=C1H7W3_PARBA
          Length = 1258

 Score =  102 bits (253), Expect = 3e-20
 Identities = 64/189 (33%), Positives = 92/189 (48%)
 Frame = +2

Query: 2   HVKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRN 181
           H K ++Y      +E L  ++        RKA FL YMV  LL    GRR  D+RD F  
Sbjct: 367 HEKRVRYARDIIQKEFLP-HISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGK 425

Query: 182 KRFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFS 361
           KR +LA  LL    ++ F    K + K +QR +  +R +  +   + AS ++ GL+ A +
Sbjct: 426 KRLDLAGPLLANLFRILFMRVTKDLYKYVQRCVETNRQLY-LNIGVKASTLSGGLKYALA 484

Query: 362 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 541
           TG W    K     +GV   L R     T++ LRRT   +   GK+   R  H +HWG V
Sbjct: 485 TGNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLV 544

Query: 542 CFLSTPDGE 568
           C   TP+G+
Sbjct: 545 CPAETPEGQ 553

[60][TOP]
>UniRef100_C0S0L5 DNA-directed RNA polymerase n=2 Tax=Paracoccidioides brasiliensis
           RepID=C0S0L5_PARBP
          Length = 1258

 Score =  102 bits (253), Expect = 3e-20
 Identities = 64/189 (33%), Positives = 92/189 (48%)
 Frame = +2

Query: 2   HVKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRN 181
           H K ++Y      +E L  ++        RKA FL YMV  LL    GRR  D+RD F  
Sbjct: 367 HEKRVRYARDIIQKEFLP-HISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGK 425

Query: 182 KRFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFS 361
           KR +LA  LL    ++ F    K + K +QR +  +R +  +   + AS ++ GL+ A +
Sbjct: 426 KRLDLAGPLLANLFRILFMRVTKDLYKYVQRCVETNRQLY-LNIGVKASTLSGGLKYALA 484

Query: 362 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 541
           TG W    K     +GV   L R     T++ LRRT   +   GK+   R  H +HWG V
Sbjct: 485 TGNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLV 544

Query: 542 CFLSTPDGE 568
           C   TP+G+
Sbjct: 545 CPAETPEGQ 553

[61][TOP]
>UniRef100_C0NB61 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
            RepID=C0NB61_AJECG
          Length = 1307

 Score =  102 bits (253), Expect = 3e-20
 Identities = 64/189 (33%), Positives = 92/189 (48%)
 Frame = +2

Query: 2    HVKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRN 181
            H K ++Y      +E L  ++        RKA FL YMV  LL    GRR  D+RD F  
Sbjct: 469  HEKRVRYARDIIQKEFLP-HISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGK 527

Query: 182  KRFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFS 361
            KR +LA  LL    ++ F    K + K +QR +  +R +  +   + AS ++ GL+ A +
Sbjct: 528  KRLDLAGPLLANLFRILFMRVTKDLYKYVQRCVETNRQLY-LNIGVKASTLSGGLKYALA 586

Query: 362  TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 541
            TG W    K     +GV   L R     T++ LRRT   +   GK+   R  H +HWG V
Sbjct: 587  TGNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLV 646

Query: 542  CFLSTPDGE 568
            C   TP+G+
Sbjct: 647  CPAETPEGQ 655

[62][TOP]
>UniRef100_A6R483 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
            RepID=A6R483_AJECN
          Length = 1743

 Score =  102 bits (253), Expect = 3e-20
 Identities = 64/189 (33%), Positives = 92/189 (48%)
 Frame = +2

Query: 2    HVKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRN 181
            H K ++Y      +E L  ++        RKA FL YMV  LL    GRR  D+RD F  
Sbjct: 852  HEKRVRYARDIIQKEFLP-HISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGK 910

Query: 182  KRFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFS 361
            KR +LA  LL    ++ F    K + K +QR +  +R +  +   + AS ++ GL+ A +
Sbjct: 911  KRLDLAGPLLANLFRILFMRVTKDLYKYVQRCVETNRQLY-LNIGVKASTLSGGLKYALA 969

Query: 362  TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 541
            TG W    K     +GV   L R     T++ LRRT   +   GK+   R  H +HWG V
Sbjct: 970  TGNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLV 1029

Query: 542  CFLSTPDGE 568
            C   TP+G+
Sbjct: 1030 CPAETPEGQ 1038

[63][TOP]
>UniRef100_Q6RYI2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cenococcum geophilum
           RepID=Q6RYI2_9PEZI
          Length = 935

 Score =  101 bits (252), Expect = 4e-20
 Identities = 59/160 (36%), Positives = 85/160 (53%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YM+  LL    GRR  D+RD F  KR +LA  L+    ++ F    + + K L
Sbjct: 168 RKAFFLGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLAGPLIANLFRILFIKLTRDVYKYL 227

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ +  +++   I+  + AS+ITNGL+ + +TG W    K     +GV   L R     T
Sbjct: 228 QKCVENNQEFS-IQMAVKASLITNGLKYSLATGNWGDQKKAASSKAGVSQVLNRYTYAST 286

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   V   GK+   R  H +HWG VC   TP+G+
Sbjct: 287 LSHLRRTNTPVGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 326

[64][TOP]
>UniRef100_Q6RYH0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Opegrapha varia
           RepID=Q6RYH0_9PEZI
          Length = 894

 Score =  101 bits (252), Expect = 4e-20
 Identities = 59/160 (36%), Positives = 83/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA F  YM+  LL    GRR+ D+RD F  KR +LA  L+    +V F    K + K L
Sbjct: 159 RKAFFFGYMIHRLLQCVLGRREEDDRDHFGKKRLDLAGPLIANLFRVLFLKLTKDVFKYL 218

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ +    +   ++  + AS+ITNGL+ + +TG W    K     +GV   L R     T
Sbjct: 219 QKCVENSTEFN-VQMAVKASVITNGLKYSLATGNWGDQKKAASAKAGVSQVLNRYTYAST 277

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   V   GK+   R  H +HWG VC   TP+G+
Sbjct: 278 LSHLRRTNTPVGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 317

[65][TOP]
>UniRef100_A1YIE1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Chytriomyces
           hyalinus RepID=A1YIE1_9FUNG
          Length = 883

 Score =  101 bits (252), Expect = 4e-20
 Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 2/162 (1%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA F  YM+  LLLA   RR  D+RD F  KR +LA  L+ +  ++ F    K +++ L
Sbjct: 166 RKAYFFGYMIHRLLLATMQRRDFDDRDHFGKKRLDLAGPLMTQLFRILFRKLTKDITRQL 225

Query: 269 QRDLNGDR--DVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPL 442
           Q+ +  ++  +++ +E  LDA+++ NGL+ + +TG W    K  +  +GV   L R    
Sbjct: 226 QKHVESNKAFNIQSLERSLDANVLKNGLKYSLATGNWGDQSKASQARAGVSQVLNRYTFA 285

Query: 443 QTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
            T++ LRR        GK+   R  H + WG VC   TP+G+
Sbjct: 286 STLSHLRRLNSPTDRDGKLAKPRQLHNTQWGMVCPAETPEGQ 327

[66][TOP]
>UniRef100_A1YIE0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Chytriomyces
           hyalinus RepID=A1YIE0_9FUNG
          Length = 883

 Score =  101 bits (252), Expect = 4e-20
 Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 2/162 (1%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA F  YM+  LLLA   RR  D+RD F  KR +LA  L+ +  ++ F    K +++ L
Sbjct: 166 RKAYFFGYMIHRLLLATMQRRDFDDRDHFGKKRLDLAGPLMTQLFRILFRKLTKDITRQL 225

Query: 269 QRDLNGDR--DVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPL 442
           Q+ +  ++  +++ +E  LDA+++ NGL+ + +TG W    K  +  +GV   L R    
Sbjct: 226 QKHVESNKAFNIQSLERSLDANVLKNGLKYSLATGNWGDQSKASQARAGVSQVLNRYTFA 285

Query: 443 QTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
            T++ LRR        GK+   R  H + WG VC   TP+G+
Sbjct: 286 STLSHLRRLNSPTDRDGKLAKPRQLHNTQWGMVCPAETPEGQ 327

[67][TOP]
>UniRef100_Q9UV94 DNA-directed RNA polymerase (Fragment) n=1 Tax=Byssochlamys nivea
           RepID=Q9UV94_9EURO
          Length = 905

 Score =  101 bits (251), Expect = 5e-20
 Identities = 62/189 (32%), Positives = 92/189 (48%)
 Frame = +2

Query: 2   HVKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRN 181
           H + ++Y      +E L  ++        RKA FL YMV  LL    GRR  D+RD F  
Sbjct: 143 HERRVRYAREIMQKEFLP-HISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGK 201

Query: 182 KRFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFS 361
           KR +LA  LL    +  F    + + + +QR +  +R++  +   + AS +T GL+ A +
Sbjct: 202 KRLDLAGPLLATLFRTLFTRVTRDLQRYVQRCVETNREIY-LNIGVKASTLTGGLKYALA 260

Query: 362 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 541
           TG W    K     +GV   L R     T++ LRRT   +   GK+   R  H +HWG V
Sbjct: 261 TGNWGEQKKAASSKAGVSQVLSRYTYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLV 320

Query: 542 CFLSTPDGE 568
           C   TP+G+
Sbjct: 321 CPAETPEGQ 329

[68][TOP]
>UniRef100_Q0U9V8 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum
           RepID=Q0U9V8_PHANO
          Length = 1252

 Score =  101 bits (251), Expect = 5e-20
 Identities = 60/159 (37%), Positives = 80/159 (50%)
 Frame = +2

Query: 92  KARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKALQ 271
           K  F  YM+  LL    GRR  D+RD F  KR +LA  L+    ++ F    K + K LQ
Sbjct: 384 KPTFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLAGPLVANLFRILFLKLTKDVFKYLQ 443

Query: 272 RDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTM 451
           R +    D   ++  + ASIITNGL+ + +TG W    K     +GV   L R     T+
Sbjct: 444 RCVESSTDFN-VQMAVKASIITNGLKYSLATGNWGDQKKAASAKAGVSQVLNRYTYASTL 502

Query: 452 AELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           + LRRT   V   GK+   R  H SHWG VC   TP+G+
Sbjct: 503 SHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETPEGQ 541

[69][TOP]
>UniRef100_B8MU25 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC
           10500 RepID=B8MU25_TALSN
          Length = 1256

 Score =  101 bits (251), Expect = 5e-20
 Identities = 62/189 (32%), Positives = 93/189 (49%)
 Frame = +2

Query: 2   HVKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRN 181
           H + ++Y      +E L  ++        RKA FL YMV  LL    GRR  D+RD F  
Sbjct: 365 HDRRVRYAREIMQKEFLP-HISQSEGSETRKAFFLGYMVHKLLQCALGRRDVDDRDHFGK 423

Query: 182 KRFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFS 361
           KR +LA  LL    +  F    + +++ +QR +  +R+V  +   L  + +T GL+ A +
Sbjct: 424 KRLDLAGPLLATLFRTLFTRVTRDLTRYVQRCVETNREV-VLNVGLKPATLTGGLKYALA 482

Query: 362 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 541
           TG W    K +   +GV   L R     T++ LRRT   +   GK+   R  H +HWG V
Sbjct: 483 TGNWGEQKKAMSSKAGVSQVLSRYTFASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLV 542

Query: 542 CFLSTPDGE 568
           C   TP+G+
Sbjct: 543 CPAETPEGQ 551

[70][TOP]
>UniRef100_B6QUV1 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC
           18224 RepID=B6QUV1_PENMQ
          Length = 1254

 Score =  101 bits (251), Expect = 5e-20
 Identities = 62/189 (32%), Positives = 93/189 (49%)
 Frame = +2

Query: 2   HVKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRN 181
           H + ++Y      +E L  ++        RKA FL YMV  LL    GRR  D+RD F  
Sbjct: 363 HDRRVRYAREIMQKEFLP-HISQSEGSETRKAFFLGYMVHKLLQCALGRRDVDDRDHFGK 421

Query: 182 KRFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFS 361
           KR +LA  LL    +  F    + +++ +QR +  +R+V  +   L  + +T GL+ A +
Sbjct: 422 KRLDLAGPLLATLFRTLFTRVTRDLTRYVQRCVETNREV-VLNVGLKPATLTGGLKYALA 480

Query: 362 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 541
           TG W    K +   +GV   L R     T++ LRRT   +   GK+   R  H +HWG V
Sbjct: 481 TGNWGEQKKAMSSKAGVSQVLSRYTFASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLV 540

Query: 542 CFLSTPDGE 568
           C   TP+G+
Sbjct: 541 CPAETPEGQ 549

[71][TOP]
>UniRef100_B6HM08 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum
           Wisconsin 54-1255 RepID=B6HM08_PENCW
          Length = 1255

 Score =  101 bits (251), Expect = 5e-20
 Identities = 62/189 (32%), Positives = 92/189 (48%)
 Frame = +2

Query: 2   HVKGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRN 181
           H + ++Y      +E L  ++        RKA FL YMV  LL    GRR  D+RD F  
Sbjct: 364 HDRRVRYARDIMQKELLP-HISQNEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGK 422

Query: 182 KRFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFS 361
           KR +LA  LL    +  F    K + + +QR +  +R++  +   + AS +T GL+ A +
Sbjct: 423 KRLDLAGPLLASLFRTLFTRVTKDLQRYVQRCVETNREIY-LNIGIKASTLTGGLKYALA 481

Query: 362 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 541
           TG W    K     +GV   L R     +++ LRRT   +   GK+   R  H +HWG V
Sbjct: 482 TGNWGEQKKAASAKAGVSQVLSRYTFASSLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLV 541

Query: 542 CFLSTPDGE 568
           C   TP+G+
Sbjct: 542 CPAETPEGQ 550

[72][TOP]
>UniRef100_A1YID4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Gigaspora gigantea
           RepID=A1YID4_9GLOM
          Length = 894

 Score =  101 bits (251), Expect = 5e-20
 Identities = 59/160 (36%), Positives = 86/160 (53%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LLLA  GRR+ D+RD +  KR +LA  LL    ++ F    K +S  L
Sbjct: 161 RKAFFLGYMVHRLLLAALGRRELDDRDHYGKKRMDLAGPLLASLFRMLFKKLTKDISIYL 220

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           ++ ++  R+   +   + A  ITNGL+ + +TG W    K ++  +GV   L R     T
Sbjct: 221 RKCIDTSREFN-LHLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFAST 279

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 280 LSHLRRCNTPMGRDGKIAKPRQLHNTHWGMVCPAETPEGQ 319

[73][TOP]
>UniRef100_C5FJF0 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
           RepID=C5FJF0_NANOT
          Length = 1258

 Score =  100 bits (250), Expect = 6e-20
 Identities = 61/160 (38%), Positives = 81/160 (50%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR  D+RD F  KR +LA  LL    +V F    K + K +
Sbjct: 395 RKAFFLGYMVHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRVLFMRLTKDLYKYV 454

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           QR +   R +  +   + AS +T GL+ A +TG W    K     +GV   L R     T
Sbjct: 455 QRCVETGRQLY-LNIGVKASTLTGGLKYALATGNWGEQKKAASSKAGVSQVLNRYTYAST 513

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 514 LSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 553

[74][TOP]
>UniRef100_A1YIE2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monoblepharis
           macrandra RepID=A1YIE2_9FUNG
          Length = 879

 Score =  100 bits (250), Expect = 6e-20
 Identities = 58/163 (35%), Positives = 86/163 (52%), Gaps = 3/163 (1%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YM+  LLL    RR+ D+RD F  KR +LA  L+    ++ F    + +S+AL
Sbjct: 168 RKAWFLGYMIHRLLLCALERREADDRDHFGKKRLDLAGPLMANLFRMLFRRLTQDISRAL 227

Query: 269 QRDLNGDRD---VRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNP 439
           ++ +   R+   V  ++H     IIT GLQ + +TG W    K ++  +GV   L R   
Sbjct: 228 RKAVESHREFNMVSAVQH----QIITRGLQFSLATGNWGDQRKMMQTRAGVSQVLSRYTY 283

Query: 440 LQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
             T++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 284 ASTLSHLRRLNSPIGREGKLAKPRQLHNTHWGMVCPAETPEGQ 326

[75][TOP]
>UniRef100_Q9UV93 DNA-directed RNA polymerase (Fragment) n=1 Tax=Trichophyton rubrum
           RepID=Q9UV93_TRIRU
          Length = 1109

 Score =  100 bits (249), Expect = 8e-20
 Identities = 61/160 (38%), Positives = 81/160 (50%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR  D+RD F  KR +LA  LL    +V F    K + K +
Sbjct: 342 RKAFFLGYMVHRLLQCALGRRYVDDRDHFGKKRLDLAGPLLANLFRVLFMRLTKDLYKYV 401

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           QR +   R +  +   + AS +T GL+ A +TG W    K     +GV   L R     T
Sbjct: 402 QRCVETGRQLY-LNIGVKASTLTGGLKYALATGNWGEQKKAASSKAGVSQVLNRYTYAST 460

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 461 LSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 500

[76][TOP]
>UniRef100_Q9UV80 DNA-directed RNA polymerase (Fragment) n=1 Tax=Sclerotinia
           sclerotiorum RepID=Q9UV80_SCLSC
          Length = 938

 Score =  100 bits (249), Expect = 8e-20
 Identities = 59/160 (36%), Positives = 84/160 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR+ D+RD F  KR +LA  LL +  +  F      + + L
Sbjct: 170 RKAFFLGYMVHKLLQCALGRRETDDRDHFGKKRLDLAGPLLAKLFRNLFRRLTTDVYRYL 229

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           QR +  +R+   +   + ++ ITNGL+ + +TG W    K    T+GV   L R     T
Sbjct: 230 QRCVENNREFN-LTLGVKSTTITNGLKYSLATGNWGDQKKAASSTAGVSQVLNRYTFAST 288

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 289 LSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 328

[77][TOP]
>UniRef100_C4V8X8 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01
           RepID=C4V8X8_NOSCE
          Length = 1143

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/160 (35%), Positives = 84/160 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV+ LLL   GR++ D+RD +  KR +LA  LL    +  +       +K +
Sbjct: 332 KKAYFLGYMVQKLLLVALGRKREDDRDHYGKKRMDLAGPLLASLFRSLYKKLCSETAKHM 391

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ + G RD   I   L AS I  G + A +TG W      ++  +GV   L R N + T
Sbjct: 392 QKCIEGGRDFN-IALGLKASTIAQGFRYAIATGNWGDQAHAMQSKAGVAQVLNRYNFVST 450

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRR    ++  GK+   R  H +HWG +C   TP+G+
Sbjct: 451 LSHLRRVNTPIEKEGKLAKPRQLHNTHWGMICPAETPEGQ 490

[78][TOP]
>UniRef100_A7E6G0 DNA-directed RNA polymerase n=1 Tax=Sclerotinia sclerotiorum 1980
           UF-70 RepID=A7E6G0_SCLS1
          Length = 1267

 Score =  100 bits (249), Expect = 8e-20
 Identities = 59/160 (36%), Positives = 84/160 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR+ D+RD F  KR +LA  LL +  +  F      + + L
Sbjct: 396 RKAFFLGYMVHKLLQCALGRRETDDRDHFGKKRLDLAGPLLAKLFRNLFRRLTTDVYRYL 455

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           QR +  +R+   +   + ++ ITNGL+ + +TG W    K    T+GV   L R     T
Sbjct: 456 QRCVENNREFN-LTLGVKSTTITNGLKYSLATGNWGDQKKAASSTAGVSQVLNRYTFAST 514

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 515 LSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 554

[79][TOP]
>UniRef100_A6S7C1 DNA-directed RNA polymerase n=2 Tax=Botryotinia fuckeliana
           RepID=A6S7C1_BOTFB
          Length = 1207

 Score =  100 bits (249), Expect = 8e-20
 Identities = 59/160 (36%), Positives = 84/160 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR+ D+RD F  KR +LA  LL +  +  F      + + L
Sbjct: 396 RKAFFLGYMVHKLLQCALGRRETDDRDHFGKKRLDLAGPLLAKLFRNLFRRLTTDVYRYL 455

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           QR +  +R+   +   + ++ ITNGL+ + +TG W    K    T+GV   L R     T
Sbjct: 456 QRCVENNREFN-LTLGVKSTTITNGLKYSLATGNWGDQKKAASSTAGVSQVLNRYTFAST 514

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 515 LSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 554

[80][TOP]
>UniRef100_A1YID6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Allomyces macrogynus
           RepID=A1YID6_ALLMA
          Length = 896

 Score =  100 bits (249), Expect = 8e-20
 Identities = 65/188 (34%), Positives = 95/188 (50%), Gaps = 1/188 (0%)
 Frame = +2

Query: 8   KGIQYGPSESMEECL-NLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           K I+Y       E L ++ + PG     RK+ F+ YMV  LLLA  GRR+ D+RD F  K
Sbjct: 135 KRIRYAHDLLERELLPHIGITPGCQ--TRKSYFIGYMVHRLLLAALGRRQVDDRDHFGKK 192

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R +LA  LL    +  F    K +S+     +   R+   +   ++++ ITNGL+ A +T
Sbjct: 193 RLDLAGPLLASLFRTFFQKLTKDVSRYFTVCIERGREFN-LNMAINSNTITNGLRYALAT 251

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G W    K +E  +GV   L R     T++ LRR    +   GK+   R  H +HWG VC
Sbjct: 252 GNWGDQKKFMETRAGVSQVLNRYTFASTLSHLRRLNTPIGREGKLAKPRQLHNTHWGMVC 311

Query: 545 FLSTPDGE 568
              TP+G+
Sbjct: 312 PAETPEGQ 319

[81][TOP]
>UniRef100_A1YID5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Allomyces macrogynus
           RepID=A1YID5_ALLMA
          Length = 867

 Score =  100 bits (249), Expect = 8e-20
 Identities = 65/188 (34%), Positives = 95/188 (50%), Gaps = 1/188 (0%)
 Frame = +2

Query: 8   KGIQYGPSESMEECL-NLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           K I+Y       E L ++ + PG     RK+ F+ YMV  LLLA  GRR+ D+RD F  K
Sbjct: 135 KRIRYAHDLLERELLPHIGITPGCQ--TRKSYFIGYMVHRLLLAALGRRQVDDRDHFGKK 192

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R +LA  LL    +  F    K +S+     +   R+   +   ++++ ITNGL+ A +T
Sbjct: 193 RLDLAGPLLASLFRTFFQKLTKDVSRYFTVCIERGREFN-LNMAINSNTITNGLRYALAT 251

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G W    K +E  +GV   L R     T++ LRR    +   GK+   R  H +HWG VC
Sbjct: 252 GNWGDQKKFMETRAGVSQVLNRYTFASTLSHLRRLNTPIGREGKLAKPRQLHNTHWGMVC 311

Query: 545 FLSTPDGE 568
              TP+G+
Sbjct: 312 PAETPEGQ 319

[82][TOP]
>UniRef100_Q873S3 RNA polymerase II subunit RPB2 (Fragment) n=1 Tax=Coltricia
           perennis RepID=Q873S3_9HOMO
          Length = 803

 Score =  100 bits (248), Expect = 1e-19
 Identities = 64/188 (34%), Positives = 97/188 (51%), Gaps = 1/188 (0%)
 Frame = +2

Query: 8   KGIQYGPSESMEECL-NLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           K I+Y      +E L ++ +  GS   ++KA FL YM+  LLLA   RR+ D+RD F  K
Sbjct: 135 KRIRYAQEILQKEMLPHISMSEGSE--SKKAYFLGYMIHRLLLAALERRELDDRDHFGKK 192

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R +LA  LL    ++ F    K + + LQ+ +   R+   I   +  ++ITNGL+ + +T
Sbjct: 193 RLDLAGPLLAGLFRMLFRKMTKDVYRYLQKCVESHREFN-INLAVKTNVITNGLKYSLAT 251

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G W    K +   +GV   L R     T++ LRR    +   GK+   R  H +HWG VC
Sbjct: 252 GNWGDQKKAMTTKAGVSQVLNRYTYASTLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVC 311

Query: 545 FLSTPDGE 568
              TP+G+
Sbjct: 312 PAETPEGQ 319

[83][TOP]
>UniRef100_Q6RYH3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Melanomma radicans
           RepID=Q6RYH3_9PLEO
          Length = 936

 Score =  100 bits (248), Expect = 1e-19
 Identities = 56/160 (35%), Positives = 84/160 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA F  YM+  LL    GRR+ D+RD F  KR +LA  L+    ++ F    K + K L
Sbjct: 168 RKAFFFGYMIHRLLQCVLGRREEDDRDHFGKKRLDLAGPLIANLFRILFLKLTKDVFKYL 227

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ +  +++   ++  +  S++TNGL+ + +TG W    K     +GV   L R     T
Sbjct: 228 QKCVENNQEFN-VQMAVKGSVLTNGLKYSLATGNWGDQKKAASAKAGVSQVLNRYTYAST 286

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   V   GK+   R  H +HWG VC   TP+G+
Sbjct: 287 LSHLRRTNTPVGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 326

[84][TOP]
>UniRef100_C5DW43 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS
           732 RepID=C5DW43_ZYGRC
          Length = 1224

 Score =  100 bits (248), Expect = 1e-19
 Identities = 58/161 (36%), Positives = 85/161 (52%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           +RKA FL YM+  LLL    RR  D+RD F  KR +LA  LL +  K  F    + + + 
Sbjct: 372 SRKAFFLGYMINRLLLCALDRRDQDDRDHFGKKRLDLAGPLLAQLFKTLFRKLTRDIFRY 431

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           +QR +   +D   ++  ++A  IT+GL+ A +TG W    K +   +GV   L R     
Sbjct: 432 MQRTVEEAKDFN-MKLAINAKTITSGLKYALATGNWGEQKKAMSSRAGVSQVLNRYTYSS 490

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 491 TLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 531

[85][TOP]
>UniRef100_A7SHD8 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
           RepID=A7SHD8_NEMVE
          Length = 1182

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 58/159 (36%), Positives = 84/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 364 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFRNLMKEVRMYA 423

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   IE  L   +IT+GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 424 QKFIDRGKDFN-IELALKPKVITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 482

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H +HWG +C   TP+G
Sbjct: 483 LSHLRRLNSPIGREGKLAKPRQLHNTHWGMICPAETPEG 521

[86][TOP]
>UniRef100_Q6RYH2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mycosphaerella
           punctiformis RepID=Q6RYH2_9PEZI
          Length = 935

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 57/160 (35%), Positives = 81/160 (50%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  +L    GR + D+RD F  KR +LA  L+ +  ++ F    K M   L
Sbjct: 166 KKAFFLGYMVNRMLQCALGRTEEDDRDHFGKKRLDLAGPLMAQVFRLKFVQLVKEMKMYL 225

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
            R + G RD   I   +  +I+T+GL+   +TG W    K     +GV   L R     T
Sbjct: 226 HRCVEGGRDFN-ITLAIKTNILTSGLRYCLATGNWGDQKKASSAKAGVSQVLNRYTYAST 284

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 285 LSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 324

[87][TOP]
>UniRef100_Q6RYG2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ustilago maydis
           RepID=Q6RYG2_USTMA
          Length = 887

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 58/166 (34%), Positives = 88/166 (53%), Gaps = 1/166 (0%)
 Frame = +2

Query: 74  SSGLN-RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARK 250
           S G N +KA F  YM+  LLLA   RR+ D+RD F  KR +L   L+    ++ F    +
Sbjct: 162 SEGSNTKKAYFFGYMIHRLLLAALDRREIDDRDHFGKKRIDLGGPLMANLFRMLFRKVTR 221

Query: 251 RMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGR 430
            + + LQ+ +   R+   I+  + +S ITNGL+ + +TG W    K ++  +GV   L R
Sbjct: 222 DVYRHLQKCVEEHREFH-IQAAVKSSTITNGLRYSLATGNWGDQKKAMQAKAGVSQVLNR 280

Query: 431 TNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
                T++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 281 FAFASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGMVCPAETPEGQ 326

[88][TOP]
>UniRef100_A1YIE4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neocallimastix
           frontalis RepID=A1YIE4_NEOFR
          Length = 915

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 56/160 (35%), Positives = 87/160 (54%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA F  YM+  LLLA   RR+CD+RD F  KR +LA  LL    ++ F      +SK+L
Sbjct: 172 KKAYFFGYMIHRLLLAALERRECDDRDHFGKKRLDLAGPLLGSLFRMLFRKLTSDVSKSL 231

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++ +R+   +   +  + IT+GL+ + +TG W    K ++  +GV   L R     T
Sbjct: 232 QKCIDRNREFN-LNVAIRPNTITDGLKYSLATGNWGAQSKFMQSRAGVSQVLNRYTFAST 290

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 291 LSHLRRLNTPIGRDGKLAKPRQLHNTHWGMVCPAETPEGQ 330

[89][TOP]
>UniRef100_P08518 DNA-directed RNA polymerase II subunit RPB2 n=4 Tax=Saccharomyces
           cerevisiae RepID=RPB2_YEAST
          Length = 1224

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 58/161 (36%), Positives = 84/161 (52%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           +RKA FL YM+  LLL    R+  D+RD F  KR +LA  LL +  K  F    K + + 
Sbjct: 372 SRKAFFLGYMINRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFKKLTKDIFRY 431

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           +QR +    D   ++  ++A  IT+GL+ A +TG W    K +   +GV   L R     
Sbjct: 432 MQRTVEEAHDFN-MKLAINAKTITSGLKYALATGNWGEQKKAMSSRAGVSQVLNRYTYSS 490

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 491 TLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 531

[90][TOP]
>UniRef100_Q6FLD5 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Candida
           glabrata RepID=RPB2_CANGA
          Length = 1223

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 58/161 (36%), Positives = 84/161 (52%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           +RKA FL YM+  LLL    R+  D+RD F  KR +LA  LL +  K  F    K + + 
Sbjct: 370 SRKAFFLGYMINRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFRKLTKDIFRY 429

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           +QR +    D   ++  ++A  IT+GL+ A +TG W    K +   +GV   L R     
Sbjct: 430 MQRTVEEANDFN-MKLAINAKTITSGLKYALATGNWGEQKKAMSSRAGVSQVLNRYTYSS 488

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 489 TLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 529

[91][TOP]
>UniRef100_Q6RYG6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Sphaerophorus
           globosus RepID=Q6RYG6_9LECA
          Length = 903

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 58/160 (36%), Positives = 84/160 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR+ D+RD F  KR +LA  LL    ++ F    K + K L
Sbjct: 169 RKAFFLGYMVHRLLQCALGRREVDDRDHFGKKRLDLAGPLLAGLFRMLFNKLTKDVYKYL 228

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           QR +  +++   +   + ++ +TNGL+ + +TG W    K     +GV   L R     T
Sbjct: 229 QRCVENNKEFN-LTLAVKSTTLTNGLKYSLATGNWGDQKKAASSKAGVSQVLNRYTFAST 287

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 288 LSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 327

[92][TOP]
>UniRef100_A8PVJ8 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
           RepID=A8PVJ8_MALGO
          Length = 1197

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 62/170 (36%), Positives = 88/170 (51%), Gaps = 5/170 (2%)
 Frame = +2

Query: 74  SSGLN-RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARK 250
           S G N +KA F  YMV  LLLA   RR+ D+RD F  KR +LA  LL    ++ F    +
Sbjct: 356 SEGSNTKKAYFFGYMVHRLLLAALDRREIDDRDHFGKKRLDLAGPLLSGLFRMLFRKVTR 415

Query: 251 RMSKALQRDLNGDRDVRPIEHYLDASI----ITNGLQRAFSTGAWTHPYKRLERTSGVVA 418
            + + LQR +   R     E +L A++    ITNGL+ + +TG W    K ++  +GV  
Sbjct: 416 DIYRHLQRCVEDQR-----EFHLQAAVRHATITNGLRYSLATGNWGDQKKAMQSKAGVSQ 470

Query: 419 NLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
            L R     T++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 471 VLNRYTFASTLSHLRRCNTPIGRDGKIAKPRQLHNTHWGMVCPAETPEGQ 520

[93][TOP]
>UniRef100_A7TTM7 DNA-directed RNA polymerase n=1 Tax=Vanderwaltozyma polyspora DSM
           70294 RepID=A7TTM7_VANPO
          Length = 1223

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 58/161 (36%), Positives = 84/161 (52%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           +RKA FL YM+  LLL    R+  D+RD F  KR +LA  LL +  K  F    K + + 
Sbjct: 369 SRKAFFLGYMINRLLLCALDRKDQDDRDHFGKKRLDLAGPLLGQLFKTLFRKLTKDIFRY 428

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           +QR +    D   ++  ++A  IT+GL+ A +TG W    K +   +GV   L R     
Sbjct: 429 MQRTVEEANDFN-MKLAINAKTITSGLKYALATGNWGEQKKAMSSRAGVSQVLNRYTYSS 487

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 488 TLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 528

[94][TOP]
>UniRef100_A1YIE3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neocallimastix
           frontalis RepID=A1YIE3_NEOFR
          Length = 915

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 56/160 (35%), Positives = 86/160 (53%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA F  YM+  LLLA   RR+CD+RD F  KR +LA  LL    ++ F    K +SK L
Sbjct: 172 KKAYFFGYMIHRLLLAALERRECDDRDHFGKKRLDLAGPLLGSLFRMLFRKLTKDVSKTL 231

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q  ++ +R+   +   +  + I++GL+ + +TG W    K ++  +GV   L R     T
Sbjct: 232 QMCIDRNREFN-LNSAIRPNTISDGLKYSLATGNWGAQSKFMQSRAGVSQVLNRYTFAST 290

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 291 LSHLRRLNTPIGRDGKLAKPRQLHNTHWGMVCPAETPEGQ 330

[95][TOP]
>UniRef100_Q8SR75 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Encephalitozoon
           cuniculi RepID=RPB2_ENCCU
          Length = 1141

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 56/160 (35%), Positives = 85/160 (53%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA F+ Y+V+ LLL   GRR  D+RD +  KR +L+  LL    +  F       ++ +
Sbjct: 332 KKAYFIGYIVQRLLLVALGRRNPDDRDHYGKKRMDLSGPLLASLFRTLFKKLCVDTTRHM 391

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ +   R+   I   L ASIIT G + A +TG W    K ++  +GV   L R N + T
Sbjct: 392 QKCIENGREFN-IALGLKASIITQGFRYALATGNWGDQAKAMQTRAGVAQVLNRYNFVST 450

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRR    ++  GK+   R  H +HWG VC   TP+G+
Sbjct: 451 LSHLRRVNTPIEKEGKLAAPRQLHNTHWGMVCPAETPEGQ 490

[96][TOP]
>UniRef100_Q9UV83 DNA-directed RNA polymerase (Fragment) n=1 Tax=Preussia minima
           RepID=Q9UV83_9PLEO
          Length = 937

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 58/160 (36%), Positives = 82/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA F  YM+  LL    GRR  D+RD F  KR +LA  L+    ++ F    K M   L
Sbjct: 168 RKAFFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLAGPLIANLFRILFLKLTKDMFNYL 227

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           ++ ++ +++       L ASI+TNGL+ + +TG W    K     +GV   L R     T
Sbjct: 228 RKCVDAEQEFNATLA-LKASIVTNGLKYSLATGNWGDQKKAASAKAGVSQVLNRYTYAST 286

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   V   GK+   R  H +HWG VC   TP+G+
Sbjct: 287 LSHLRRTNTPVGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 326

[97][TOP]
>UniRef100_C4QZQ7 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
           RepID=C4QZQ7_PICPG
          Length = 1227

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 62/187 (33%), Positives = 92/187 (49%)
 Frame = +2

Query: 8   KGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKR 187
           K IQY      +E L  ++        RK  FL YMV  LLL    R+  D+RD F  KR
Sbjct: 340 KRIQYAKDILQKELLP-HITQEEGFETRKTFFLGYMVNRLLLCALERKDQDDRDHFGKKR 398

Query: 188 FELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTG 367
            +LA  LL    ++ F    + + + +QR +  DRD   +   + ++ IT+GL+ + +TG
Sbjct: 399 LDLAGPLLANLFRILFRKLTREIYRYMQRCIETDRDFN-LNLAVKSTTITSGLKYSLATG 457

Query: 368 AWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCF 547
            W    K +   +GV   L R     T++ LRRT   +   GK+   R  H +HWG VC 
Sbjct: 458 NWGEQKKAMSSRAGVSQVLNRYTYSSTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCP 517

Query: 548 LSTPDGE 568
             TP+G+
Sbjct: 518 AETPEGQ 524

[98][TOP]
>UniRef100_A3GFG5 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
           RepID=A3GFG5_PICST
          Length = 1232

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 64/188 (34%), Positives = 94/188 (50%), Gaps = 1/188 (0%)
 Frame = +2

Query: 8   KGIQYGPSESMEECL-NLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           K IQY      +E L N+    G    +RKA FL YMV  LLL    R++ D+RD F  K
Sbjct: 341 KRIQYAKDILQKELLPNITQEEGFE--SRKAFFLGYMVNRLLLCALERKEPDDRDHFGKK 398

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R +LA  LL    ++ F    K +   +QR +  D++   +   + +  IT+GL+ + +T
Sbjct: 399 RLDLAGPLLANLFRILFRKLTKDIYNYMQRCVENDKEFN-LTLAVKSQTITDGLRYSLAT 457

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G W    K +   +GV   L R     T++ LRRT   +   GK+   R  H +HWG VC
Sbjct: 458 GNWGEQKKAMSSRAGVSQVLNRYTYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVC 517

Query: 545 FLSTPDGE 568
              TP+G+
Sbjct: 518 PAETPEGQ 525

[99][TOP]
>UniRef100_Q6RYI4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Candida parapsilosis
           RepID=Q6RYI4_CANPA
          Length = 892

 Score = 98.2 bits (243), Expect = 4e-19
 Identities = 64/188 (34%), Positives = 93/188 (49%), Gaps = 1/188 (0%)
 Frame = +2

Query: 8   KGIQYGPSESMEECL-NLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           K IQY      +E L N+    G     RKA FL YMV  LLL    R++ D+RD F  K
Sbjct: 139 KRIQYAKDILQKELLPNITQEEGFE--TRKAFFLGYMVNRLLLCALERKEPDDRDHFGKK 196

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R +LA  LL    ++ F    K +   +QR +  D++   +   + +  IT+GL+ + +T
Sbjct: 197 RLDLAGPLLANLFRILFKKLTKDIYNYMQRCVENDKEFN-LTLAVKSQTITDGLRYSLAT 255

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G W    K +   +GV   L R     T++ LRRT   +   GK+   R  H +HWG VC
Sbjct: 256 GNWGEQKKAMSSRAGVSQVLNRYTYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVC 315

Query: 545 FLSTPDGE 568
              TP+G+
Sbjct: 316 PAETPEGQ 323

[100][TOP]
>UniRef100_B5RV50 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
           RepID=B5RV50_DEBHA
          Length = 1232

 Score = 98.2 bits (243), Expect = 4e-19
 Identities = 64/188 (34%), Positives = 93/188 (49%), Gaps = 1/188 (0%)
 Frame = +2

Query: 8   KGIQYGPSESMEECL-NLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           K IQY      +E L N+    G     RKA FL YMV  LLL    R++ D+RD F  K
Sbjct: 343 KRIQYAKDILQKELLPNITQEEGFE--TRKAFFLGYMVNRLLLCALERKEPDDRDHFGKK 400

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R +LA  LL    ++ F    K +   +QR +  D++   +   + +  IT+GL+ + +T
Sbjct: 401 RLDLAGPLLANLFRILFKKLTKDIYNYMQRCVENDKEFN-LTLAVKSQTITDGLRYSLAT 459

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G W    K +   +GV   L R     T++ LRRT   +   GK+   R  H +HWG VC
Sbjct: 460 GNWGEQKKAMSSRAGVSQVLNRYTYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVC 519

Query: 545 FLSTPDGE 568
              TP+G+
Sbjct: 520 PAETPEGQ 527

[101][TOP]
>UniRef100_A5DVP4 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
           RepID=A5DVP4_LODEL
          Length = 1238

 Score = 98.2 bits (243), Expect = 4e-19
 Identities = 64/188 (34%), Positives = 93/188 (49%), Gaps = 1/188 (0%)
 Frame = +2

Query: 8   KGIQYGPSESMEECL-NLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           K IQY      +E L N+    G     RKA FL YMV  LLL    R++ D+RD F  K
Sbjct: 345 KRIQYAKDILQKELLPNITQEEGFE--TRKAFFLGYMVNRLLLCALERKEPDDRDHFGKK 402

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R +LA  LL    ++ F    K +   +QR +  D++   +   + +  IT+GL+ + +T
Sbjct: 403 RLDLAGPLLANLFRILFKKLTKDIYNYMQRCVENDKEFN-LTLAVKSQTITDGLRYSLAT 461

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G W    K +   +GV   L R     T++ LRRT   +   GK+   R  H +HWG VC
Sbjct: 462 GNWGEQKKAMSSRAGVSQVLNRYTYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVC 521

Query: 545 FLSTPDGE 568
              TP+G+
Sbjct: 522 PAETPEGQ 529

[102][TOP]
>UniRef100_Q6RYI3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Candida tropicalis
           RepID=Q6RYI3_CANTR
          Length = 1020

 Score = 97.8 bits (242), Expect = 5e-19
 Identities = 65/188 (34%), Positives = 92/188 (48%), Gaps = 1/188 (0%)
 Frame = +2

Query: 8   KGIQYGPSESMEECL-NLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           K IQY      +E L N+    G     RKA FL YMV  LLL    R++ D+RD F  K
Sbjct: 141 KRIQYAKDILQKELLPNITQEEGFE--TRKAFFLGYMVNRLLLCALERKEPDDRDHFGKK 198

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R +LA  LL    ++ F    K +   +QR +  D D   +   + +  IT+GL+ + +T
Sbjct: 199 RLDLAGPLLAGLFRILFKKLTKDIYNYMQRCVENDSDFN-LTLAVKSQTITDGLRYSLAT 257

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G W    K +   +GV   L R     T++ LRRT   +   GK+   R  H +HWG VC
Sbjct: 258 GNWGEQRKAMSSRAGVSQVLNRYTYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVC 317

Query: 545 FLSTPDGE 568
              TP+G+
Sbjct: 318 PAETPEGQ 325

[103][TOP]
>UniRef100_Q6RYG8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phragmidium sp. MB
           RepID=Q6RYG8_9BASI
          Length = 931

 Score = 97.8 bits (242), Expect = 5e-19
 Identities = 62/186 (33%), Positives = 93/186 (50%), Gaps = 1/186 (0%)
 Frame = +2

Query: 14  IQYGPSESMEECL-NLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRF 190
           +QY      +E L ++ +  G  G  +KA F  YMV  LLLA   RR  D+RD F  KR 
Sbjct: 146 LQYAEEILQKEMLPHISMSEGQQG--KKAYFFGYMVHRLLLAALDRRDLDDRDHFGKKRL 203

Query: 191 ELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGA 370
           +LA  LL    ++ F    K + + LQ+ +   +    +   + ++ ITNGL+ + +TG 
Sbjct: 204 DLAGPLLASLFRILFRKLTKDVYRHLQKCVEMQKPFN-LNAAVKSNTITNGLKYSLATGN 262

Query: 371 WTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFL 550
           W    K ++  +GV   L R     T++ LRR    +   GK+   R  H SHWG VC  
Sbjct: 263 WGDQKKAMQAKAGVSQVLNRYTFASTLSHLRRCNTPIGRDGKIAKPRQLHNSHWGMVCPA 322

Query: 551 STPDGE 568
            TP+G+
Sbjct: 323 ETPEGQ 328

[104][TOP]
>UniRef100_Q6CWA5 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
           RepID=Q6CWA5_KLULA
          Length = 1221

 Score = 97.8 bits (242), Expect = 5e-19
 Identities = 57/161 (35%), Positives = 84/161 (52%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           +RKA FL YM+  LLL    R+  D+RD F  KR +LA  LL +  K  F    + + + 
Sbjct: 366 SRKAFFLGYMINRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFRKLTRDILRF 425

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           +QR +   +D   ++  + A+ IT GL+ A +TG W    K +   +GV   L R     
Sbjct: 426 MQRSVEEAKDFN-LKLAVKATTITAGLKYALATGNWGEQKKSMSSRAGVSQVLNRYTYSS 484

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 485 TLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 525

[105][TOP]
>UniRef100_C5MEG3 DNA-directed RNA polymerase n=1 Tax=Candida tropicalis MYA-3404
           RepID=C5MEG3_CANTT
          Length = 1240

 Score = 97.8 bits (242), Expect = 5e-19
 Identities = 65/188 (34%), Positives = 92/188 (48%), Gaps = 1/188 (0%)
 Frame = +2

Query: 8   KGIQYGPSESMEECL-NLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           K IQY      +E L N+    G     RKA FL YMV  LLL    R++ D+RD F  K
Sbjct: 344 KRIQYAKDILQKELLPNITQEEGFE--TRKAFFLGYMVNRLLLCALERKEPDDRDHFGKK 401

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R +LA  LL    ++ F    K +   +QR +  D D   +   + +  IT+GL+ + +T
Sbjct: 402 RLDLAGPLLAGLFRILFKKLTKDIYNYMQRCVENDSDFN-LTLAVKSQTITDGLRYSLAT 460

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G W    K +   +GV   L R     T++ LRRT   +   GK+   R  H +HWG VC
Sbjct: 461 GNWGEQRKAMSSRAGVSQVLNRYTYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVC 520

Query: 545 FLSTPDGE 568
              TP+G+
Sbjct: 521 PAETPEGQ 528

[106][TOP]
>UniRef100_Q753Q4 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Eremothecium
           gossypii RepID=RPB2_ASHGO
          Length = 1222

 Score = 97.8 bits (242), Expect = 5e-19
 Identities = 57/161 (35%), Positives = 84/161 (52%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           +RKA FL YM+  LLL    R+  D+RD F  KR +LA  LL +  K  F    + + + 
Sbjct: 367 SRKAFFLGYMINRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFRKLTRDILRF 426

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           +QR +   +D   ++  + A+ IT GL+ A +TG W    K +   +GV   L R     
Sbjct: 427 MQRSVEEAKDFN-LKLAVKATTITAGLKYALATGNWGEQKKAMSSRAGVSQVLNRYTYSS 485

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 486 TLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 526

[107][TOP]
>UniRef100_UPI0001926137 PREDICTED: similar to predicted protein n=1 Tax=Hydra
           magnipapillata RepID=UPI0001926137
          Length = 1426

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 56/160 (35%), Positives = 85/160 (53%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  +LLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 365 KKAYFLGYMVHRILLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRLYA 424

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D + IE  +    IT+GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 425 QKFIDKGKDFK-IELAIKTKTITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 483

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRR    +   GK+   R  H +HWG +C   TP+G+
Sbjct: 484 LSHLRRLNSPIGRDGKLARPRQLHNTHWGMICPAETPEGQ 523

[108][TOP]
>UniRef100_Q6RYH4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hydnum repandum
           RepID=Q6RYH4_9HOMO
          Length = 887

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 61/187 (32%), Positives = 94/187 (50%)
 Frame = +2

Query: 8   KGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKR 187
           K ++Y      +E L  ++  G    ++KA F  YM+  LLLA   RR+ D+RD F  KR
Sbjct: 144 KRLRYAQEILQKEMLP-HVSMGEGSESKKAFFFGYMIHRLLLAALERRELDDRDHFGKKR 202

Query: 188 FELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTG 367
            +LA  LL    ++ F    K + + LQ+ +   +D   I   + ++ ITNGL+ + +TG
Sbjct: 203 LDLAGPLLASLFRMLFRKLTKDVYRHLQKCVETHKDFN-ISIAVKSNTITNGLKYSLATG 261

Query: 368 AWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCF 547
            W    K +   +GV   L R     T++ LRR    +   GK+   R  H +HWG VC 
Sbjct: 262 NWGDQKKSMSSKAGVSQVLNRYTFASTLSHLRRCNTPLGRDGKIAKPRQLHNTHWGMVCP 321

Query: 548 LSTPDGE 568
             TP+G+
Sbjct: 322 AETPEGQ 328

[109][TOP]
>UniRef100_C5DLS0 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS
           6340 RepID=C5DLS0_LACTC
          Length = 1220

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 57/161 (35%), Positives = 84/161 (52%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           +RKA FL YM+  LLL    R+  D+RD F  KR +LA  LL +  K  F    + + + 
Sbjct: 367 SRKAFFLGYMINRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFRKLTRDILRF 426

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           +QR +   +D   ++  + A+ IT GL+ A +TG W    K +   +GV   L R     
Sbjct: 427 MQRSVEEAKDFN-LKLAVKATTITAGLKYALATGNWGEQKKAMTSRAGVSQVLNRYTYSS 485

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 486 TLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 526

[110][TOP]
>UniRef100_C4PBI7 DNA-directed RNA polymerase n=1 Tax=Epichloe festucae
           RepID=C4PBI7_9HYPO
          Length = 1261

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 57/160 (35%), Positives = 82/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR+ D+RD F  KR +LA  LL +  +         +S  L
Sbjct: 400 RKAFFLGYMVHKLLQCALGRREPDDRDHFGKKRLDLAGPLLAKLFRGIVRRMNNELSNYL 459

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           +R + G+R    +   +    ++NGL+ + +TG W    K +  T+GV   L R     T
Sbjct: 460 RRCVEGNRHFN-LAVGIKPGTLSNGLKYSLATGNWGDQKKAMSSTAGVSQVLNRYTFAST 518

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 519 LSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 558

[111][TOP]
>UniRef100_A1YID1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Basidiobolus ranarum
           RepID=A1YID1_9FUNG
          Length = 883

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 55/160 (34%), Positives = 85/160 (53%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA F  YMV  LLLA   RR  D+RD +  KR +LA  LL    ++ F    K + + L
Sbjct: 165 KKAYFFGYMVHRLLLAALERRDLDDRDHYGKKRMDLAGPLLAMLFRMLFRKLTKDVGRYL 224

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++ +R+   +   + ++ ITNGL+ + +TG W    K ++  +GV   L R     T
Sbjct: 225 QKCIDSNREFN-LTLAVKSNTITNGLKYSLATGNWGDQKKAMQARAGVSQVLNRYTFAST 283

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 284 LSHLRRCNTPIGRDGKIAKPRQLHNTHWGMVCPAETPEGQ 323

[112][TOP]
>UniRef100_UPI000151B416 hypothetical protein PGUG_02833 n=1 Tax=Pichia guilliermondii ATCC
           6260 RepID=UPI000151B416
          Length = 1291

 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 65/188 (34%), Positives = 93/188 (49%), Gaps = 1/188 (0%)
 Frame = +2

Query: 8   KGIQYGPSESMEECL-NLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           K IQY      +E L N+    G     RKA FL YMV  LLL    R++ D+RD F  K
Sbjct: 396 KRIQYAKDILQKELLPNITQDEGFE--TRKAFFLGYMVNRLLLCALERKEPDDRDHFGKK 453

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R +LA  LL    ++ F    K +   +QR +  D+ V  +   + +  IT+GL+ + +T
Sbjct: 454 RLDLAGPLLASLFRILFKKLTKDIYNYMQRCVENDK-VFNLTLAVKSQTITDGLRYSLAT 512

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G W    K +   +GV   L R     T++ LRRT   +   GK+   R  H +HWG VC
Sbjct: 513 GNWGEQKKAMSSRAGVSQVLNRYTYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVC 572

Query: 545 FLSTPDGE 568
              TP+G+
Sbjct: 573 PAETPEGQ 580

[113][TOP]
>UniRef100_Q9UV82 DNA-directed RNA polymerase (Fragment) n=1 Tax=Microglossum viride
           RepID=Q9UV82_9PEZI
          Length = 938

 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 57/160 (35%), Positives = 82/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR+ D+RD F  KR +LA  LL +  +  F    + + K  
Sbjct: 170 RKAFFLGYMVHKLLQCALGRRETDDRDHFGKKRLDLAGPLLAKLFRNLFKKLTQDLFKYT 229

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           QR +   ++  P    + ++ +T GL+ + +TG W    K    T+GV   L R     T
Sbjct: 230 QRCVENRKEFNPALG-IKSTTLTAGLKYSLATGNWGDQKKAASSTAGVSQVLNRYTFAST 288

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 289 LSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 328

[114][TOP]
>UniRef100_Q9UV81 DNA-directed RNA polymerase (Fragment) n=1 Tax=Leotia viscosa
           RepID=Q9UV81_9HELO
          Length = 938

 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 57/160 (35%), Positives = 82/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR+ D+RD F  KR +LA  LL +  +  F    + + K  
Sbjct: 170 RKAFFLGYMVHKLLQCALGRRETDDRDHFGKKRLDLAGPLLAKLFRNLFKKLTQDLFKYT 229

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           QR +   ++  P    + ++ +T GL+ + +TG W    K    T+GV   L R     T
Sbjct: 230 QRCVENRKEFNPALG-IKSTTLTAGLKYSLATGNWGDQKKAASSTAGVSQVLNRYTFAST 288

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 289 LSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 328

[115][TOP]
>UniRef100_Q2I5S5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phycomyces
           blakesleeanus RepID=Q2I5S5_PHYBL
          Length = 801

 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 54/160 (33%), Positives = 85/160 (53%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RK+ F  YM+  LLLA   RR+ D+RD +  KR +LA  L+    ++ F    K ++K L
Sbjct: 169 RKSYFFGYMIHRLLLAALERRELDDRDHYGKKRMDLAGPLMAGLFRLLFKKLTKDVAKYL 228

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ +   R+   +   + ++ ITNGL+ + +TG W    K ++  +GV   L R     T
Sbjct: 229 QKCIESSREFN-LTLAVKSNTITNGLKYSLATGNWGDQKKAMQARAGVSQVLNRYTFAST 287

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 288 LSHLRRCNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 327

[116][TOP]
>UniRef100_A4QV56 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
           RepID=A4QV56_MAGGR
          Length = 1276

 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 58/160 (36%), Positives = 80/160 (50%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  +L    GRR  D+RD F  KR +LA  LL +  +         M   L
Sbjct: 410 RKAFFLGYMVHKILQCALGRRDVDDRDHFGKKRLDLAGPLLAKLFRGIIRKLTNDMMGGL 469

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           +R ++  RD   +   L  + +TNGL+ + +TG W    K    T+GV   L R     T
Sbjct: 470 RRCIDAGRDF-DLTASLKPNTLTNGLKYSLATGNWGDQKKAASSTAGVSQVLNRYTFAST 528

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 529 LSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 568

[117][TOP]
>UniRef100_A5DHT2 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Pichia
           guilliermondii RepID=RPB2_PICGU
          Length = 1236

 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 65/188 (34%), Positives = 93/188 (49%), Gaps = 1/188 (0%)
 Frame = +2

Query: 8   KGIQYGPSESMEECL-NLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           K IQY      +E L N+    G     RKA FL YMV  LLL    R++ D+RD F  K
Sbjct: 341 KRIQYAKDILQKELLPNITQDEGFE--TRKAFFLGYMVNRLLLCALERKEPDDRDHFGKK 398

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R +LA  LL    ++ F    K +   +QR +  D+ V  +   + +  IT+GL+ + +T
Sbjct: 399 RLDLAGPLLASLFRILFKKLTKDIYNYMQRCVENDK-VFNLTLAVKSQTITDGLRYSLAT 457

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G W    K +   +GV   L R     T++ LRRT   +   GK+   R  H +HWG VC
Sbjct: 458 GNWGEQKKAMSSRAGVSQVLNRYTYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVC 517

Query: 545 FLSTPDGE 568
              TP+G+
Sbjct: 518 PAETPEGQ 525

[118][TOP]
>UniRef100_Q9UVA2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neolecta vitellina
           RepID=Q9UVA2_9ASCO
          Length = 930

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 58/161 (36%), Positives = 83/161 (51%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           +RKA FL YMV  LLL    RR+ D+RD F  KR +LA  LL    ++ F    K + + 
Sbjct: 169 SRKAFFLGYMVHRLLLVALERREQDDRDHFGKKRLDLAGPLLANLFRMLFKKLYKDVYRY 228

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           +Q+ +  +R+   +   + A  IT GL+ + +TG W    K  +   GV   L R     
Sbjct: 229 MQKCVENNREFN-LTLAVKAPTITQGLKYSLATGNWGEQKKAAQAKVGVSQVLNRYTFAS 287

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRRT   +   GK+   R  H SHWG VC   TP+G+
Sbjct: 288 TLSHLRRTNTPIGRDGKIAKPRQLHNSHWGLVCPAETPEGQ 328

[119][TOP]
>UniRef100_Q9UV99 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neurospora crassa
           RepID=Q9UV99_NEUCR
          Length = 903

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 69/193 (35%), Positives = 94/193 (48%), Gaps = 11/193 (5%)
 Frame = +2

Query: 23  GPSESMEECLNLYLFPGSSGLN----RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRF 190
           G  ++ +E L   L P  S       RKA FL YMV  LL    GRR  D+RD F  KR 
Sbjct: 145 GRIKAAKEMLQKELLPHISQAEGCETRKAFFLGYMVHKLLQCVLGRRDTDDRDHFGKKRL 204

Query: 191 ELAAELLERELKVHFAHARKRMSKALQRDLNG--DRDVRPIEHY-----LDASIITNGLQ 349
           +LA  LL        A   + + + L +DL G   R V   +H+     + AS +TNGL+
Sbjct: 205 DLAGPLL--------AKLFRGIVRRLTQDLMGYMKRCVDTNKHFSLALGIKASTLTNGLK 256

Query: 350 RAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSH 529
            + +TG W    K +  T+GV   L R     T++ LRRT   +   GK+   R  H +H
Sbjct: 257 YSLATGNWGDQKKAMSSTAGVSQVLNRYTFSSTLSHLRRTNTPIGRDGKLAKPRQLHNTH 316

Query: 530 WGKVCFLSTPDGE 568
           WG VC   TP+G+
Sbjct: 317 WGLVCPAETPEGQ 329

[120][TOP]
>UniRef100_Q872W7 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
           RepID=Q872W7_NEUCR
          Length = 1287

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 69/193 (35%), Positives = 94/193 (48%), Gaps = 11/193 (5%)
 Frame = +2

Query: 23  GPSESMEECLNLYLFPGSSGLN----RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRF 190
           G  ++ +E L   L P  S       RKA FL YMV  LL    GRR  D+RD F  KR 
Sbjct: 400 GRIKAAKEMLQKELLPHISQAEGCETRKAFFLGYMVHKLLQCVLGRRDTDDRDHFGKKRL 459

Query: 191 ELAAELLERELKVHFAHARKRMSKALQRDLNG--DRDVRPIEHY-----LDASIITNGLQ 349
           +LA  LL        A   + + + L +DL G   R V   +H+     + AS +TNGL+
Sbjct: 460 DLAGPLL--------AKLFRGIVRRLTQDLMGYMKRCVDTNKHFSLALGIKASTLTNGLK 511

Query: 350 RAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSH 529
            + +TG W    K +  T+GV   L R     T++ LRRT   +   GK+   R  H +H
Sbjct: 512 YSLATGNWGDQKKAMSSTAGVSQVLNRYTFSSTLSHLRRTNTPIGRDGKLAKPRQLHNTH 571

Query: 530 WGKVCFLSTPDGE 568
           WG VC   TP+G+
Sbjct: 572 WGLVCPAETPEGQ 584

[121][TOP]
>UniRef100_Q7RYF4 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
           RepID=Q7RYF4_NEUCR
          Length = 1005

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 69/193 (35%), Positives = 94/193 (48%), Gaps = 11/193 (5%)
 Frame = +2

Query: 23  GPSESMEECLNLYLFPGSSGLN----RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRF 190
           G  ++ +E L   L P  S       RKA FL YMV  LL    GRR  D+RD F  KR 
Sbjct: 164 GRIKAAKEMLQKELLPHISQAEGCETRKAFFLGYMVHKLLQCVLGRRDTDDRDHFGKKRL 223

Query: 191 ELAAELLERELKVHFAHARKRMSKALQRDLNG--DRDVRPIEHY-----LDASIITNGLQ 349
           +LA  LL        A   + + + L +DL G   R V   +H+     + AS +TNGL+
Sbjct: 224 DLAGPLL--------AKLFRGIVRRLTQDLMGYMKRCVDTNKHFSLALGIKASTLTNGLK 275

Query: 350 RAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSH 529
            + +TG W    K +  T+GV   L R     T++ LRRT   +   GK+   R  H +H
Sbjct: 276 YSLATGNWGDQKKAMSSTAGVSQVLNRYTFSSTLSHLRRTNTPIGRDGKLAKPRQLHNTH 335

Query: 530 WGKVCFLSTPDGE 568
           WG VC   TP+G+
Sbjct: 336 WGLVCPAETPEGQ 348

[122][TOP]
>UniRef100_Q6RYG9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Peltigera
           membranacea RepID=Q6RYG9_9LECA
          Length = 895

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 56/160 (35%), Positives = 84/160 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  +L    GRR+ D+RD F  KR +LA  LL    ++ F    K + K L
Sbjct: 161 KKAFFLGYMVHRMLQCALGRREVDDRDHFGKKRLDLAGPLLAGLFRMLFNKLTKDVFKYL 220

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ +  +R+   +   + ++ +TNGL+ + +TG W    K     +GV   L R     T
Sbjct: 221 QKCVENNREFN-LTLGVKSTTLTNGLKYSLATGNWGDQKKAASSKAGVSQVLNRYTFAST 279

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 280 LSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 319

[123][TOP]
>UniRef100_Q6QM23 DNA-directed RNA polymerase (Fragment) n=1 Tax=Gibberella
           moniliformis RepID=Q6QM23_GIBMO
          Length = 973

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 57/160 (35%), Positives = 82/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR+ D+RD F  KR +LA  LL +  +         +S  L
Sbjct: 306 RKAFFLGYMVHKLLQCALGRREPDDRDHFGKKRLDLAGPLLAKLFRGIIRRINTELSNYL 365

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           +R +  +R+   +   +  S ++NGL+ + +TG W    K    T+GV   L R     T
Sbjct: 366 KRCVESNRNFN-LTVAIKPSTLSNGLKYSLATGNWGDQKKAASSTAGVSQVLNRYTFAST 424

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 425 LSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 464

[124][TOP]
>UniRef100_Q5C8C8 RNA polymerase II subunit (Fragment) n=1 Tax=Gelasinospora
           tetrasperma RepID=Q5C8C8_9PEZI
          Length = 590

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 63/167 (37%), Positives = 85/167 (50%), Gaps = 7/167 (4%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR  D+RD F  KR +LA  LL        A   + + + L
Sbjct: 162 RKAFFLGYMVHKLLQCVLGRRDTDDRDHFGKKRLDLAGPLL--------AKLFRGIVRRL 213

Query: 269 QRDLNG--DRDVRPIEHY-----LDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLG 427
            +DL G   R V   +H+     + AS +TNGL+ + +TG W    K +  T+GV   L 
Sbjct: 214 TQDLMGYMKRCVDTNKHFSLALGIKASTLTNGLKYSLATGNWGDQKKAMSSTAGVSQVLN 273

Query: 428 RTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           R     T++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 274 RYTFASTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 320

[125][TOP]
>UniRef100_Q5C8C0 RNA polymerase II subunit (Fragment) n=1 Tax=Neurospora pannonica
           RepID=Q5C8C0_9PEZI
          Length = 597

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 63/167 (37%), Positives = 85/167 (50%), Gaps = 7/167 (4%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR  D+RD F  KR +LA  LL        A   + + + L
Sbjct: 169 RKAFFLGYMVHKLLQCVLGRRDTDDRDHFGKKRLDLAGPLL--------AKLFRGIVRRL 220

Query: 269 QRDLNG--DRDVRPIEHY-----LDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLG 427
            +DL G   R V   +H+     + AS +TNGL+ + +TG W    K +  T+GV   L 
Sbjct: 221 TQDLMGYMKRCVDTNKHFSLALGIKASTLTNGLKYSLATGNWGDQKKAMSSTAGVSQVLN 280

Query: 428 RTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           R     T++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 281 RYTFASTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 327

[126][TOP]
>UniRef100_Q5C8B0 RNA polymerase II subunit (Fragment) n=1 Tax=Sordaria macrospora
           RepID=Q5C8B0_SORMA
          Length = 600

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 63/167 (37%), Positives = 85/167 (50%), Gaps = 7/167 (4%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR  D+RD F  KR +LA  LL        A   + + + L
Sbjct: 169 RKAFFLGYMVHKLLQCVLGRRDTDDRDHFGKKRLDLAGPLL--------AKLFRGIVRRL 220

Query: 269 QRDLNG--DRDVRPIEHY-----LDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLG 427
            +DL G   R V   +H+     + AS +TNGL+ + +TG W    K +  T+GV   L 
Sbjct: 221 TQDLMGYMKRCVDTNKHFSLALGIKASTLTNGLKYSLATGNWGDQKKAMSSTAGVSQVLN 280

Query: 428 RTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           R     T++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 281 RYTFASTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 327

[127][TOP]
>UniRef100_Q9UV96 DNA-directed RNA polymerase (Fragment) n=1 Tax=Microascus
           trigonosporus RepID=Q9UV96_9PEZI
          Length = 937

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 54/160 (33%), Positives = 82/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR  D+RD F  KR +LA  LL +  +         ++  +
Sbjct: 172 RKAFFLGYMVHKLLQCALGRRDVDDRDHFGKKRLDLAGPLLSKLFRNIMRRMNTELTSYM 231

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           +  +  +R+ + I   +  + +TNG++ + +TG W    K +  T+GV   L R     T
Sbjct: 232 KMCIQNNRNFQ-ISQGIRITTLTNGMKYSLATGNWGDQKKAMSSTAGVSQVLNRYTFAST 290

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 291 LSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 330

[128][TOP]
>UniRef100_Q5C8E5 RNA polymerase II subunit (Fragment) n=1 Tax=Cercophora
           atropurpurea RepID=Q5C8E5_9PEZI
          Length = 595

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 55/160 (34%), Positives = 82/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR  D+RD F  KR +LA  LL +  +       + +   +
Sbjct: 169 RKAFFLGYMVHKLLQCVLGRRDTDDRDHFGKKRLDLAGPLLAKLFRGIIRRVTQDLMSYM 228

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           +R ++G++    +   + A  +TN L+ + +TG W    K +  T+GV   L R     T
Sbjct: 229 KRCIDGNKQFS-LALGIKAGTLTNALKYSLATGNWGDQKKAMNSTAGVSQVLNRYTFAST 287

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 288 LSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 327

[129][TOP]
>UniRef100_Q5A8Y5 DNA-directed RNA polymerase n=2 Tax=Candida albicans
           RepID=Q5A8Y5_CANAL
          Length = 1234

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 64/188 (34%), Positives = 91/188 (48%), Gaps = 1/188 (0%)
 Frame = +2

Query: 8   KGIQYGPSESMEECL-NLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           K IQY      +E L N+    G     RKA FL YMV  LLL    R++ D+RD F  K
Sbjct: 342 KRIQYAKDILQKELLPNITQEEGFE--TRKAFFLGYMVNRLLLCALERKEPDDRDHFGKK 399

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R +LA  LL    ++ F    K +   +QR +    D   +   + +  IT+GL+ + +T
Sbjct: 400 RLDLAGPLLANLFRILFKKLTKDIYNYMQRCVENGGDFN-VTLAVKSQTITDGLRYSLAT 458

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G W    K +   +GV   L R     T++ LRRT   +   GK+   R  H +HWG VC
Sbjct: 459 GNWGEQRKAMSSRAGVSQVLNRYTYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVC 518

Query: 545 FLSTPDGE 568
              TP+G+
Sbjct: 519 PAETPEGQ 526

[130][TOP]
>UniRef100_C7ZA30 Putative uncharacterized protein n=1 Tax=Nectria haematococca mpVI
           77-13-4 RepID=C7ZA30_NECH7
          Length = 1261

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 57/160 (35%), Positives = 81/160 (50%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR+ D+RD F  KR +LA  LL +  +         +S  L
Sbjct: 400 RKAFFLGYMVHKLLQCALGRREPDDRDHFGKKRLDLAGPLLAKLFRGIVRRMNTELSNYL 459

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           +R + G+R    +   +    ++NGL+ + +TG W    K    T+GV   L R     T
Sbjct: 460 KRCVEGNRHFN-LAVGIKPGTLSNGLKYSLATGNWGDQKKAASSTAGVSQVLNRYTFAST 518

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 519 LSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 558

[131][TOP]
>UniRef100_B9W6V2 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
           RepID=B9W6V2_CANDC
          Length = 1234

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 64/188 (34%), Positives = 91/188 (48%), Gaps = 1/188 (0%)
 Frame = +2

Query: 8   KGIQYGPSESMEECL-NLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           K IQY      +E L N+    G     RKA FL YMV  LLL    R++ D+RD F  K
Sbjct: 342 KRIQYAKDILQKELLPNITQEEGFE--TRKAFFLGYMVNRLLLCALERKEPDDRDHFGKK 399

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R +LA  LL    ++ F    K +   +QR +    D   +   + +  IT+GL+ + +T
Sbjct: 400 RLDLAGPLLANLFRILFKKLTKDIYNYMQRCVENGGDFN-VTLAVKSQTITDGLRYSLAT 458

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G W    K +   +GV   L R     T++ LRRT   +   GK+   R  H +HWG VC
Sbjct: 459 GNWGEQRKAMSSRAGVSQVLNRYTYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVC 518

Query: 545 FLSTPDGE 568
              TP+G+
Sbjct: 519 PAETPEGQ 526

[132][TOP]
>UniRef100_A1YID8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coelomomyces
           stegomyiae RepID=A1YID8_9FUNG
          Length = 862

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 55/160 (34%), Positives = 80/160 (50%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RK+ F+ YM+  LL    GRR+ D+RD F  KR +LA  LL    +  F    K + +  
Sbjct: 161 RKSYFIGYMINRLLSTALGRREVDDRDHFGKKRLDLAGPLLASLFRTFFQKLTKDVGRYF 220

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
              L   R    +   ++++ ITNGL+ A +TG W    K +E  +GV   L R     T
Sbjct: 221 TNCLERSRPFN-LNMAINSNTITNGLRYALATGNWGDQKKFMETRAGVSQVLNRYTFAST 279

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 280 LSHLRRLNTPIGREGKLAKPRQLHNTHWGMVCPAETPEGQ 319

[133][TOP]
>UniRef100_A1YID0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mucor hiemalis
           RepID=A1YID0_9FUNG
          Length = 884

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 54/160 (33%), Positives = 84/160 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RK+ F  YM+  LLLA   RR+ D+RD +  KR +LA  L+    ++ F    K ++K L
Sbjct: 169 RKSYFFGYMIHRLLLAALERRELDDRDHYGKKRMDLAGVLMSGLFRLLFKKLTKDVAKYL 228

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ +   R+   +   + ++ ITNGL+ + +TG W    K  +  +GV   L R     T
Sbjct: 229 QKCIESSREFN-LTLAVKSNTITNGLKYSLATGNWGDQKKAAQARAGVSQVLNRYTFAST 287

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 288 LSHLRRCNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 327

[134][TOP]
>UniRef100_UPI0000221AC5 hypothetical protein CBG18197 n=1 Tax=Caenorhabditis briggsae AF16
           RepID=UPI0000221AC5
          Length = 1194

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 57/160 (35%), Positives = 81/160 (50%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA F+ YMV  LLLA  GRR+ D+RD   NKR +LA  LL    +  F +  K M    
Sbjct: 367 KKAFFIGYMVHRLLLAALGRRELDDRDHIGNKRLDLAGPLLAFLFRALFRNLLKEMRMTA 426

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ +N + D   ++  +  S IT GL  + +TG W    K  +  +GV   L R     T
Sbjct: 427 QKYINKNDDFA-LDVCVKTSTITRGLAYSLATGNWGDQKKAHQSRAGVSQVLNRLTYTAT 485

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRR    +   GK+   R  H + WG VC   TP+G+
Sbjct: 486 LSHLRRANSPIGREGKLAKPRQLHNTQWGMVCPAETPEGQ 525

[135][TOP]
>UniRef100_A8XS50 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae
           RepID=A8XS50_CAEBR
          Length = 1215

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 57/160 (35%), Positives = 81/160 (50%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA F+ YMV  LLLA  GRR+ D+RD   NKR +LA  LL    +  F +  K M    
Sbjct: 388 KKAFFIGYMVHRLLLAALGRRELDDRDHIGNKRLDLAGPLLAFLFRALFRNLLKEMRMTA 447

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ +N + D   ++  +  S IT GL  + +TG W    K  +  +GV   L R     T
Sbjct: 448 QKYINKNDDFA-LDVCVKTSTITRGLAYSLATGNWGDQKKAHQSRAGVSQVLNRLTYTAT 506

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRR    +   GK+   R  H + WG VC   TP+G+
Sbjct: 507 LSHLRRANSPIGREGKLAKPRQLHNTQWGMVCPAETPEGQ 546

[136][TOP]
>UniRef100_Q6RYH6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dibaeis baeomyces
           RepID=Q6RYH6_9LECA
          Length = 893

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 56/160 (35%), Positives = 82/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  +L    GRR  D+RD F  KR +LA  L+    +  F    K + K L
Sbjct: 160 RKAFFLGYMVHRMLQVTLGRRDPDDRDHFGKKRLDLAGPLMAGLFRTLFNKLTKDVYKYL 219

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ +  +R+   +   + ++ +TNGL+ + +TG W    K     +GV   L R     T
Sbjct: 220 QKCVESNREFN-LTLGVKSTTLTNGLRYSLATGNWGEQKKAASSKAGVSQVLNRYTFAST 278

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 279 LSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 318

[137][TOP]
>UniRef100_Q6RYG4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Thamnolia
           vermicularis RepID=Q6RYG4_9LECA
          Length = 893

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 56/160 (35%), Positives = 83/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  +L    GRR  D+RD F  KR +LA  L+    ++ F    K + K L
Sbjct: 160 RKAFFLGYMVHRMLQVALGRRDPDDRDHFGKKRLDLAGPLMAGLFRMLFNKLTKDVYKYL 219

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ +  +R+   +   + ++ +TNGL+ + +TG W    K     +GV   L R     T
Sbjct: 220 QKCVESNREFN-LTLGVKSTTLTNGLKYSLATGNWGDQKKAASSKAGVSQVLNRYTFAST 278

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 279 LSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 318

[138][TOP]
>UniRef100_Q6CAD6 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
           RepID=Q6CAD6_YARLI
          Length = 1229

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 54/160 (33%), Positives = 85/160 (53%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  +LL   GR++ D+RD F  KR +LA  L+    ++ F    K + + +
Sbjct: 365 RKAYFLGYMVHRMLLVALGRKEPDDRDHFGKKRLDLAGPLMAGIFRMLFKKLTKDIYRYM 424

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
            + +  ++D   +   + ++ ITNGL+ + +TG W    K +   +GV   L R     T
Sbjct: 425 LKCVETNKDFN-LTLAVKSNTITNGLKYSLATGNWGDQKKAMSSRAGVSQVLNRYTFAST 483

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 484 LSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 523

[139][TOP]
>UniRef100_Q5C8E6 RNA polymerase II subunit (Fragment) n=1 Tax=Cercophora sp. SMH3200
           RepID=Q5C8E6_9PEZI
          Length = 590

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 60/165 (36%), Positives = 85/165 (51%), Gaps = 5/165 (3%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LLL   GRR  D+RD F  KR +LA  LL +     F    +RM++ L
Sbjct: 164 RKAFFLGYMVNKLLLCSLGRRDTDDRDHFGKKRLDLAGPLLAKL----FRGVVRRMTQDL 219

Query: 269 QRDLNGDRDVRPIEHY-----LDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRT 433
              +   R +   +H+     + A+ +TN L+ + +TG W    K +  T+GV   L R 
Sbjct: 220 MGYMK--RCIDTNKHFSLALGIKANTLTNALKYSLATGNWGDQKKAMSSTAGVSQVLNRY 277

Query: 434 NPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
               T++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 278 TFASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 322

[140][TOP]
>UniRef100_A7XIF0 DNA-directed RNA polymerase n=1 Tax=Psilopezia deligata
           RepID=A7XIF0_9PEZI
          Length = 801

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 55/160 (34%), Positives = 83/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL     RR+ D+RD F  KR +LA  LL +  +  +    K + K L
Sbjct: 140 RKAFFLGYMVHRLLQCALERREVDDRDHFGKKRLDLAGPLLAQLFRTLWKQLTKEVYKYL 199

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           ++ + G ++   +   + ++ IT+GL+ + +TG W    K     +GV   L R     T
Sbjct: 200 EKCVEGGKEFN-LNLAVKSNTITSGLKYSLATGNWASQKKAASSKAGVSQVLNRYTFAST 258

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 259 LSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 298

[141][TOP]
>UniRef100_Q6RYG3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Usnea cornuta
           RepID=Q6RYG3_9LECA
          Length = 903

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 57/160 (35%), Positives = 83/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR+ D+RD F  KR +LA  LL    +  F    K + K L
Sbjct: 169 RKAFFLGYMVHRLLQCALGRREVDDRDHFGKKRLDLAGPLLASLFRGTFNKLTKDVYKYL 228

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ +  +++   +   + ++ +TNGL+ + +TG W    K     +GV   L R     T
Sbjct: 229 QKCVENNKEFN-MTLAVKSTHLTNGLRYSLATGNWGDQKKAASVKAGVSQVLNRYTFAST 287

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 288 LSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 327

[142][TOP]
>UniRef100_Q5C8A9 RNA polymerase II subunit (Fragment) n=1 Tax=Strattonia carbonaria
           RepID=Q5C8A9_9PEZI
          Length = 606

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 55/160 (34%), Positives = 83/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR  D+RD F  KR +LA  LL +  +       + + + +
Sbjct: 176 RKAFFLGYMVHKLLQCVLGRRDVDDRDHFGKKRLDLAGPLLAKLFRGIVRRITQDLMQYM 235

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           +R ++G++    +   + A  +TN L+ + +TG W    K +  T+GV   L R     T
Sbjct: 236 KRCIDGNKHFT-LALGIKAGTLTNALKYSLATGNWGDQKKAMSSTAGVSQVLNRYTFAST 294

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 295 LSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 334

[143][TOP]
>UniRef100_Q5C8A6 RNA polymerase II subunit (Fragment) n=1 Tax=Valsonectria pulchella
           RepID=Q5C8A6_9HYPO
          Length = 592

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 57/160 (35%), Positives = 80/160 (50%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR  D+RD F  KR +LA  LL +  +         +S  +
Sbjct: 169 RKAFFLGYMVHKLLQCVLGRRDTDDRDHFGKKRLDLAGPLLAKLFRGIVRRMTNELSGYI 228

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           +R +  DR    +   L  + +T+GL+ + +TG W    K    T+GV   L R     T
Sbjct: 229 RRCIESDRMFN-VTMGLKHTTLTSGLKYSLATGNWGDQKKAASSTAGVSQVLNRYTFAST 287

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 288 LSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 327

[144][TOP]
>UniRef100_Q02061 DNA-directed RNA polymerase II subunit RPB2 n=1
           Tax=Schizosaccharomyces pombe RepID=RPB2_SCHPO
          Length = 1210

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 55/160 (34%), Positives = 85/160 (53%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YM+  +LL    RR+ D+RD F  KR +LA  LL    ++ F    + + K +
Sbjct: 359 RKAFFLGYMIHRMLLCALERREPDDRDHFGKKRLDLAGPLLASLFRMLFRKMTRDVYKYM 418

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ +  +R+   +   + ++IITNGL+ + +TG W    + +    GV   L R     T
Sbjct: 419 QKCVETNREFN-LTLAVKSNIITNGLRYSLATGNWGDQKRSMVNRVGVSQVLNRYTFAST 477

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 478 LSHLRRTNTPIGRDGKLAKPRQLHNTHWGMVCPAETPEGQ 517

[145][TOP]
>UniRef100_UPI000186D6F3 DNA-directed RNA polymerase II 135 kDa polypeptide, putative n=1
           Tax=Pediculus humanus corporis RepID=UPI000186D6F3
          Length = 1175

 Score = 94.7 bits (234), Expect = 4e-18
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 360 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMFA 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   IIT+GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG +C   TP+G
Sbjct: 479 LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEG 517

[146][TOP]
>UniRef100_Q7QAK7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
           RepID=Q7QAK7_ANOGA
          Length = 1175

 Score = 94.7 bits (234), Expect = 4e-18
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 360 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYA 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   IIT+GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG +C   TP+G
Sbjct: 479 LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEG 517

[147][TOP]
>UniRef100_Q10578 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Caenorhabditis
           elegans RepID=RPB2_CAEEL
          Length = 1193

 Score = 94.7 bits (234), Expect = 4e-18
 Identities = 57/160 (35%), Positives = 81/160 (50%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA F+ YMV  LLLA  GRR+ D+RD   NKR +LA  LL    +  F +  K M    
Sbjct: 366 KKAFFIGYMVHRLLLAALGRRELDDRDHIGNKRLDLAGPLLAFLFRSLFRNLLKEMRMTA 425

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ +N + D   ++  +  S IT GL  + +TG W    K  +  +GV   L R     T
Sbjct: 426 QKYINKNDDFA-LDVCVKTSTITRGLTYSLATGNWGDQKKAHQSRAGVSQVLNRLTYTAT 484

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRR    +   GK+   R  H + WG VC   TP+G+
Sbjct: 485 LSHLRRANSPIGREGKLAKPRQLHNTQWGMVCPAETPEGQ 524

[148][TOP]
>UniRef100_Q27548 DNA-directed RNA polymerase (Fragment) n=1 Tax=Crassostrea gigas
           RepID=Q27548_CRAGI
          Length = 859

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 167 KKAYFLGYMVHRLLLAAIGRREVDDRDHYGNKRLDLAGPLLAFLFRGLFRNLMKEVRLYA 226

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   IIT+GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 227 QKFIDRGKDFN-LELAIKTRIITDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 285

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG +C   TP+G
Sbjct: 286 LSHLRRLNSPIGRDGKLARPRQLHNTQWGMICPAETPEG 324

[149][TOP]
>UniRef100_B4R0H5 DNA-directed RNA polymerase n=1 Tax=Drosophila simulans
           RepID=B4R0H5_DROSI
          Length = 1176

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 56/159 (35%), Positives = 84/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 361 KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYT 420

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +  +IIT+GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 421 QKFIDRGKDFN-LELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 479

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG +C   TP+G
Sbjct: 480 LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEG 518

[150][TOP]
>UniRef100_B4PTC0 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
           RepID=B4PTC0_DROYA
          Length = 1176

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 56/159 (35%), Positives = 84/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 361 KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYT 420

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +  +IIT+GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 421 QKFIDRGKDFN-LELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 479

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG +C   TP+G
Sbjct: 480 LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEG 518

[151][TOP]
>UniRef100_B4N9I3 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
           RepID=B4N9I3_DROWI
          Length = 1176

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 56/159 (35%), Positives = 84/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 361 KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYT 420

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +  +IIT+GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 421 QKFIDRGKDFN-LELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 479

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG +C   TP+G
Sbjct: 480 LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEG 518

[152][TOP]
>UniRef100_B4M040 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
           RepID=B4M040_DROVI
          Length = 1176

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 56/159 (35%), Positives = 84/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 361 KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYT 420

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +  +IIT+GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 421 QKFIDRGKDFN-LELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 479

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG +C   TP+G
Sbjct: 480 LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEG 518

[153][TOP]
>UniRef100_B4KDW5 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
           RepID=B4KDW5_DROMO
          Length = 1176

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 56/159 (35%), Positives = 84/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 361 KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYT 420

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +  +IIT+GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 421 QKFIDRGKDFN-LELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 479

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG +C   TP+G
Sbjct: 480 LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEG 518

[154][TOP]
>UniRef100_B4K015 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
           RepID=B4K015_DROGR
          Length = 1175

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 56/159 (35%), Positives = 84/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 360 KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYT 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +  +IIT+GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG +C   TP+G
Sbjct: 479 LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEG 517

[155][TOP]
>UniRef100_Q298X6 DNA-directed RNA polymerase n=2 Tax=pseudoobscura subgroup
           RepID=Q298X6_DROPS
          Length = 1176

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 56/159 (35%), Positives = 84/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 361 KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYT 420

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +  +IIT+GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 421 QKFIDRGKDFN-LELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 479

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG +C   TP+G
Sbjct: 480 LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEG 518

[156][TOP]
>UniRef100_B3P0M0 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
           RepID=B3P0M0_DROER
          Length = 1176

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 56/159 (35%), Positives = 84/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 361 KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYT 420

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +  +IIT+GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 421 QKFIDRGKDFN-LELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 479

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG +C   TP+G
Sbjct: 480 LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEG 518

[157][TOP]
>UniRef100_B3LYR3 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
           RepID=B3LYR3_DROAN
          Length = 1176

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 56/159 (35%), Positives = 84/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 361 KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYT 420

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +  +IIT+GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 421 QKFIDRGKDFN-LELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 479

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG +C   TP+G
Sbjct: 480 LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEG 518

[158][TOP]
>UniRef100_B0WKE9 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
           RepID=B0WKE9_CULQU
          Length = 1176

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 361 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLLKEVRMYA 420

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   IIT+GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 421 QKFIDRGKDFN-LELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 479

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG +C   TP+G
Sbjct: 480 LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEG 518

[159][TOP]
>UniRef100_Q6RYG7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pneumocystis carinii
           RepID=Q6RYG7_PNECA
          Length = 898

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 57/160 (35%), Positives = 83/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YM+  LLL    RR  D+RD F  KR +LA  LL    ++ F    K + K +
Sbjct: 168 RKAFFLGYMIHRLLLCALERRDPDDRDHFGKKRLDLAGPLLANLFRMLFKKLTKDVYKYM 227

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ +  +R+   +   + ++ IT+GL+ + +TG W    K +    GV   L R     T
Sbjct: 228 QKCVETNREFN-LTLAVKSNTITHGLRYSLATGNWGDQKKIMSARVGVSQVLNRYTFAST 286

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GKV   R  H +HWG VC   TP+G+
Sbjct: 287 LSHLRRTNTPIGRDGKVAKPRQLHNTHWGLVCPAETPEGQ 326

[160][TOP]
>UniRef100_Q5UVL8 RNA polymerase II subunit (Fragment) n=1 Tax=Cercophora areolata
           RepID=Q5UVL8_9PEZI
          Length = 574

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 55/160 (34%), Positives = 82/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR+ D+RD F  KR +LA  LL +  +       + +   +
Sbjct: 146 RKAFFLGYMVHKLLQCALGRRETDDRDHFGKKRLDLAGPLLAKLFRGVMRRMTQDLMSYM 205

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           +R +  + +   +E  + A  +TN L+ + +TG W    K +  T+GV   L R     T
Sbjct: 206 KRCIETNANFN-LETAVRAQTLTNALKYSLATGNWGDQKKAMSSTAGVSQVLNRYTFAST 264

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 265 LSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 304

[161][TOP]
>UniRef100_Q5RM00 DNA-directed RNA polymerase (Fragment) n=1 Tax=Fomitiporia
           mediterranea RepID=Q5RM00_9HOMO
          Length = 898

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 1/188 (0%)
 Frame = +2

Query: 8   KGIQYGPSESMEECL-NLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 184
           K ++Y      +E L ++ +  GS   ++KA F  YM+  LLLA   RR+ D+RD F  K
Sbjct: 112 KRLRYAQEILQKEMLPHISMAEGSE--SKKAYFFGYMIHRLLLAALERRELDDRDHFGKK 169

Query: 185 RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 364
           R +LA  LL    ++ F    K + + LQ+ +   ++   I   +    +TNGL+ + +T
Sbjct: 170 RLDLAGPLLTGLFRMLFRKLTKDVYRYLQKCVETHKEFN-INMAIKTQTLTNGLKYSLAT 228

Query: 365 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 544
           G W    K +   +GV   L R     T++ LRR    +   GK+   R  H +HWG VC
Sbjct: 229 GNWGDQKKAMSSKAGVSQVLNRYTYASTLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVC 288

Query: 545 FLSTPDGE 568
              TP+G+
Sbjct: 289 PAETPEGQ 296

[162][TOP]
>UniRef100_Q5C8C5 RNA polymerase II subunit (Fragment) n=1 Tax=Lasiosphaeria hispida
           RepID=Q5C8C5_9PEZI
          Length = 600

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 54/160 (33%), Positives = 82/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR  D+RD F  KR +LA  L+ +  +       + + + +
Sbjct: 169 RKAFFLGYMVHKLLQCVLGRRDTDDRDHFGKKRLDLAGPLMAKLFRGLVRRITQELMQHM 228

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           +R ++G++    +   +    +TNGL+ + +TG W    K    T+GV   L R     T
Sbjct: 229 KRCIDGNKHFS-LALGIKPGTLTNGLKYSLATGNWGDQKKAASSTAGVSQVLNRYTFAST 287

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 288 LSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 327

[163][TOP]
>UniRef100_Q207G5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Sparassis crispa
           RepID=Q207G5_9APHY
          Length = 900

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 54/161 (33%), Positives = 83/161 (51%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA F  YM+  LLLA   RR  D+RD F  KR +LA  LL    ++ F    K + + 
Sbjct: 151 SKKAYFFGYMIHRLLLAALERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRY 210

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           LQ+ +   ++   +   + ++ ITNGL+ + +TG W    K +   +GV   L R     
Sbjct: 211 LQKCVESHKEFN-LNLAVKSNTITNGLKYSLATGNWGDQKKSMASKAGVSQVLNRYTYAS 269

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 270 TLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQ 310

[164][TOP]
>UniRef100_B6K5Q5 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
           yFS275 RepID=B6K5Q5_SCHJY
          Length = 1210

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 56/160 (35%), Positives = 84/160 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  +LL    RR+ D+RD F  KR +LA  LL    ++ F    + + K +
Sbjct: 359 RKAFFLGYMVHRMLLCALERREPDDRDHFGKKRLDLAGPLLASLFRMLFKKMTRDVYKYM 418

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ +  +R+   +   + ++ ITNGL+ + +TG W    + L    GV   L R     T
Sbjct: 419 QKCVETNREFN-LTLAVKSNTITNGLRYSLATGNWGDQKRGLANRVGVSQVLNRYTFAST 477

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 478 LSHLRRTNTPIGRDGKLAKPRQLHNTHWGMVCPAETPEGQ 517

[165][TOP]
>UniRef100_P08266 DNA-directed RNA polymerase II subunit RPB2 n=2 Tax=melanogaster
           subgroup RepID=RPB2_DROME
          Length = 1176

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 56/159 (35%), Positives = 84/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 361 KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYT 420

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +  +IIT+GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 421 QKFIDRGKDFN-LELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 479

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG +C   TP+G
Sbjct: 480 LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEG 518

[166][TOP]
>UniRef100_UPI0001865901 hypothetical protein BRAFLDRAFT_125505 n=1 Tax=Branchiostoma
           floridae RepID=UPI0001865901
          Length = 1176

 Score = 94.0 bits (232), Expect = 7e-18
 Identities = 56/160 (35%), Positives = 84/160 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL Y+V  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 362 KKAYFLGYIVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAYLFRGLFKNLTKEVRIYA 421

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   IIT+GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 422 QKFIDRGKDFN-LELAIKTRIITDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 480

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRR    +   GK+   R  H S WG +C   TP+G+
Sbjct: 481 LSHLRRLNSPIGRDGKLAKPRQLHNSLWGMICPAETPEGQ 520

[167][TOP]
>UniRef100_C3Y5U9 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
           RepID=C3Y5U9_BRAFL
          Length = 1104

 Score = 94.0 bits (232), Expect = 7e-18
 Identities = 56/160 (35%), Positives = 84/160 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL Y+V  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 362 KKAYFLGYIVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAYLFRGLFKNLTKEVRIYA 421

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   IIT+GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 422 QKFIDRGKDFN-LELAIKTRIITDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 480

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRR    +   GK+   R  H S WG +C   TP+G+
Sbjct: 481 LSHLRRLNSPIGRDGKLAKPRQLHNSLWGMICPAETPEGQ 520

[168][TOP]
>UniRef100_Q9UV79 DNA-directed RNA polymerase (Fragment) n=1 Tax=Peziza quelepidotia
           RepID=Q9UV79_9PEZI
          Length = 927

 Score = 94.0 bits (232), Expect = 7e-18
 Identities = 56/160 (35%), Positives = 81/160 (50%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  +LL    R++ D+RD F  KR +LA  LL    +  F    K + K L
Sbjct: 169 RKAFFLGYMVHQMLLCALERKEPDDRDHFGKKRLDLAGPLLAGLFRTLFKKLTKDVYKYL 228

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ +   R+   +   + ++ ITNGL+ + +TG W    K     +GV   L R     T
Sbjct: 229 QKCVESSREFN-LTLAVKSTTITNGLKYSLATGNWGEQKKAASARAGVSQVLNRYTFAST 287

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LR T   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 288 LSHLRGTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 327

[169][TOP]
>UniRef100_Q873V3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Echinodontium
           tinctorium RepID=Q873V3_9HOMO
          Length = 871

 Score = 94.0 bits (232), Expect = 7e-18
 Identities = 54/161 (33%), Positives = 83/161 (51%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           +RKA F  YM+  LLLA   RR+ D+RD F  KR +LA  LL    ++ F    + + + 
Sbjct: 142 SRKAYFFGYMIHRLLLAAMERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTRDVYRH 201

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           LQ+ +   ++   +   +  + ITNGL+ + +TG W    K +   +GV   L R     
Sbjct: 202 LQKCVETHKEFN-LNLAIKHTTITNGLKYSLATGNWGDQKKAMSAKAGVSQVLNRYTYAS 260

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 261 TLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQ 301

[170][TOP]
>UniRef100_Q873T2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Henningsomyces
           candidus RepID=Q873T2_9AGAR
          Length = 848

 Score = 94.0 bits (232), Expect = 7e-18
 Identities = 54/161 (33%), Positives = 82/161 (50%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA F  YM+  LLLA   RR+ D+RD F  KR +LA  LL    ++ F    K + + 
Sbjct: 140 SKKAYFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLSKDVYRY 199

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           LQ+ +   ++   +   +    ITNGL+ + +TG W    K +   +GV   L R     
Sbjct: 200 LQKCVEAQKEFN-LALAVKHQTITNGLKYSLATGNWGDQKKSMSSKAGVSQVLNRYTYAS 258

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 259 TLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQ 299

[171][TOP]
>UniRef100_Q207F7 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Scytinostroma alutum RepID=Q207F7_9APHY
          Length = 434

 Score = 94.0 bits (232), Expect = 7e-18
 Identities = 57/164 (34%), Positives = 84/164 (51%), Gaps = 3/164 (1%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           +RKA F  YMV  LLLA   RR+ D+RD F  KR +LA  LL    ++ F    + + + 
Sbjct: 44  SRKAYFFGYMVHRLLLAAMERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTRDVYRY 103

Query: 266 LQRDLNGDRDVR---PIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTN 436
           LQ+ +   ++      I+H    + ITNGL+ + +TG W    K +   +GV   L R  
Sbjct: 104 LQKCVETHKEFNFNLAIKH----TTITNGLKYSLATGNWGDQKKAMSAKAGVSQVLNRYT 159

Query: 437 PLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
            + T++ LRR    +   GK+   R  H  HWG VC   TP+G+
Sbjct: 160 YVSTLSHLRRCNTPLGREGKIAKPRQLHNHHWGMVCPAETPEGQ 203

[172][TOP]
>UniRef100_A1YIC9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Furculomyces
           boomerangus RepID=A1YIC9_9FUNG
          Length = 906

 Score = 94.0 bits (232), Expect = 7e-18
 Identities = 60/187 (32%), Positives = 94/187 (50%)
 Frame = +2

Query: 8   KGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKR 187
           K I+YG     +E L  ++   +    RK+ F  YMV  LLL    RR+ D+RD +  KR
Sbjct: 141 KRIKYGAEILQKEFLP-HVGTQAHNETRKSFFFGYMVHRLLLCALERREQDDRDHYGKKR 199

Query: 188 FELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTG 367
            +LA  LL    +  F    K M++ LQ+ ++  R+   +   + ++ IT GL+ + +TG
Sbjct: 200 MDLAGPLLAMLFRNLFRKVTKDMTRYLQKCIDSKREFN-LTMAIKSNTITAGLKYSLATG 258

Query: 368 AWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCF 547
            W    K ++  +GV   L R     T++ LRR    +   GK+   R  H +HWG VC 
Sbjct: 259 NWGDQKKSMQSRTGVSQVLNRYTFASTLSHLRRCNTPIGRDGKIAKPRQLHNTHWGLVCP 318

Query: 548 LSTPDGE 568
             TP+G+
Sbjct: 319 AETPEGQ 325

[173][TOP]
>UniRef100_A8Q7K3 DNA-directed RNA polymerase n=1 Tax=Brugia malayi
           RepID=A8Q7K3_BRUMA
          Length = 1185

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 56/160 (35%), Positives = 81/160 (50%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD   NKR +LA  LL    +  F +  K +    
Sbjct: 376 KKAYFLGYMVHRLLLAALGRRELDDRDHMGNKRLDLAGPLLAFLFRALFRNLLKEVRLTA 435

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ +N + D   ++  +   +IT GL  + +TG W    K  +  +GV   L R     T
Sbjct: 436 QKYINKNGDFM-LDLCVKTPLITRGLAYSLATGNWGDQKKAHQSRAGVSQVLNRLTYTAT 494

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRR    +   GK+   R  H + WG VC   TP+G+
Sbjct: 495 LSHLRRCNSPIGREGKLAKPRQLHNTQWGMVCPAETPEGQ 534

[174][TOP]
>UniRef100_Q5S3L7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Suillus pictus
           RepID=Q5S3L7_9HOMO
          Length = 899

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 54/161 (33%), Positives = 83/161 (51%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA F  YM+  LLLA   RR+ D+RD F  KR +LA  LL    ++ F    + + + 
Sbjct: 160 SKKAYFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLAGLFRMLFKKLTRDVYRY 219

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           LQ+ +   ++   +   +    ITNGL+ + +TG W    K +   +GV   L R     
Sbjct: 220 LQKCVETHKEFN-LSLAVKHQTITNGLKYSLATGNWGDQKKAMSSKAGVSQVLNRYTYAS 278

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 279 TLSHLRRTNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQ 319

[175][TOP]
>UniRef100_Q5C8D7 RNA polymerase II subunit (Fragment) n=1 Tax=Cercophora scortea
           RepID=Q5C8D7_9PEZI
          Length = 597

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 56/160 (35%), Positives = 82/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR  D+RD F  KR +LA  LL +  +       + +   +
Sbjct: 169 RKAFFLGYMVHKLLQCVLGRRDTDDRDHFGKKRLDLAGPLLAKLFRGVVRRMTQDLMGYM 228

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           +R ++ +R    +   + AS +TN L+ + +TG W    K +  T+GV   L R     T
Sbjct: 229 KRCIDTNRHFS-LALGIKASTLTNALKYSLATGNWGDQKKAMSSTAGVSQVLNRYTFAST 287

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 288 LSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 327

[176][TOP]
>UniRef100_Q5C8B9 RNA polymerase II subunit (Fragment) n=1 Tax=Podospora
           appendiculata RepID=Q5C8B9_9PEZI
          Length = 582

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 56/160 (35%), Positives = 82/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR  D+RD F  KR +LA  LL +  +       + +   +
Sbjct: 169 RKAFFLGYMVHKLLQCVLGRRDTDDRDHFGKKRLDLAGPLLAKLFRGVVRRMTQDLMGYM 228

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           +R ++ +R    +   + AS +TN L+ + +TG W    K +  T+GV   L R     T
Sbjct: 229 KRCIDTNRHFS-LALGIKASTLTNALKYSLATGNWGDQKKAMSSTAGVSQVLNRYTFAST 287

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 288 LSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 327

[177][TOP]
>UniRef100_Q5C8B6 RNA polymerase II subunit (Fragment) n=1 Tax=Schizothecium
           fimbriatum RepID=Q5C8B6_9PEZI
          Length = 598

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 55/160 (34%), Positives = 81/160 (50%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR  D+RD F  KR +LA  LL +  +       + +   +
Sbjct: 169 RKAFFLGYMVHKLLQCVLGRRDVDDRDHFGKKRLDLAGPLLAKLFRGIVRRITQDLMSYM 228

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           +R ++G++    +   +  S +TN L+ + +TG W    K    T+GV   L R     T
Sbjct: 229 KRCIDGNKQFS-LALGIKPSTLTNALKYSLATGNWGDQKKAASSTAGVSQVLNRYTFAST 287

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 288 LSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 327

[178][TOP]
>UniRef100_Q207H1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ganoderma tsugae
           RepID=Q207H1_GANTS
          Length = 883

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 55/161 (34%), Positives = 82/161 (50%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA F  YM+  LLLA   RR  D+RD F  KR +LA  LL    ++ F    K + + 
Sbjct: 146 SKKAYFFGYMIHRLLLAALERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRY 205

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           LQ+ +   ++   I   +  + ITNGL+ + +TG W    K +   +GV   L R     
Sbjct: 206 LQKCVETHKEFN-ISLAVKHNTITNGLKYSLATGNWGDQKKSMSSKAGVSQVLNRYTYAS 264

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 265 TLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQ 305

[179][TOP]
>UniRef100_C9SGY6 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Verticillium
           albo-atrum VaMs.102 RepID=C9SGY6_9PEZI
          Length = 1260

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 55/160 (34%), Positives = 79/160 (49%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YM   LL    GRR  D+RD F  KR +LA  LL +  +       + +S  L
Sbjct: 401 RKAFFLGYMTHKLLQCALGRRDIDDRDHFGKKRLDLAGPLLAKLFRTIVRRMNQELSGHL 460

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           +R +  +R    +   +    ++NGL+ + +TG W    K    T+GV   L R     T
Sbjct: 461 KRCVESNRQFS-LTLGVKPQTLSNGLKYSLATGNWGDQKKAASSTAGVSQVLNRYTFAST 519

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 520 LSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 559

[180][TOP]
>UniRef100_A7XIE3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phymatotrichopsis
           omnivora RepID=A7XIE3_9PEZI
          Length = 884

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 54/160 (33%), Positives = 82/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  +L     RR+ D+RD F  KR +LA  LL +  +  +    K + K L
Sbjct: 163 RKAFFLGYMVHRMLQCALERREVDDRDHFGKKRLDLAGPLLAQLFRNLWKQLTKEVYKYL 222

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           ++ + G ++   +   + ++ IT GL+ + +TG W    K     +GV   L R     T
Sbjct: 223 EKCVEGSKEFN-LNLAVKSNTITTGLKYSLATGNWASQKKAASSKAGVSQVLNRYTFAST 281

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 282 LSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 321

[181][TOP]
>UniRef100_Q873S8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Stereum hirsutum
           RepID=Q873S8_9HOMO
          Length = 801

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 54/161 (33%), Positives = 83/161 (51%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA F  YM+  LLLA   RR+ D+RD F  KR +LA  LL    ++ F    + + + 
Sbjct: 140 SKKAYFFGYMIHRLLLAGMERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTRDVYRY 199

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           LQ+ +   +D   +   +  + ITNGL+ + +TG W    K +   +GV   L R     
Sbjct: 200 LQKCVETHKDFN-LNLAVKHNTITNGLKYSLATGNWGDQKKSMASKAGVSQVLNRYTYAS 258

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 259 TLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQ 299

[182][TOP]
>UniRef100_Q6RYG5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Taphrina deformans
           RepID=Q6RYG5_9ASCO
          Length = 936

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 55/160 (34%), Positives = 82/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LLL    RR  D+RD F  KR +LA  LL    ++ F    K + + +
Sbjct: 167 RKAFFLGYMVHRLLLCALERRDPDDRDHFGKKRIDLAGPLLAGLFRMLFKRLTKDIRQYM 226

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
            + ++  ++   +   +  + ITNGL+ + +TG W    K++    GV   L R     T
Sbjct: 227 TKCVDSGKEFN-LPLAVKHTTITNGLRYSLATGTWGDQKKQMNARVGVSQVLNRYTYAST 285

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 286 LSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 325

[183][TOP]
>UniRef100_Q6QJD4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cortinarius iodes
           RepID=Q6QJD4_CORIO
          Length = 878

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 54/160 (33%), Positives = 81/160 (50%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA F  YM+  LLLA   RR+ D+RD F  KR +LA  LL    ++ F    K + + L
Sbjct: 156 QKAHFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLSNLFRMLFRKLTKDVYRYL 215

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ +   ++   +   +    ITNGL+ + +TG W    K +   +GV   L R     T
Sbjct: 216 QKCVETHKEFN-LALAVKHQTITNGLKYSLATGNWGDQKKSMSSKAGVSQVLNRYTYAST 274

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 275 LSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQ 314

[184][TOP]
>UniRef100_Q5C8B5 RNA polymerase II subunit (Fragment) n=1 Tax=Podospora fimiseda
           RepID=Q5C8B5_9PEZI
          Length = 595

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 54/160 (33%), Positives = 84/160 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLL   GRR  D+RD F  KR +LA  LL +  +       + +   +
Sbjct: 167 KKAFFLGYMVNRLLLCALGRRDTDDRDHFGKKRLDLAGPLLAKLFRGVVRRMTQDLMSYM 226

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           +R ++ ++ +  +   + A+ +TN L+ + +TG W    K +  T+GV   L R     T
Sbjct: 227 KRCVDTNK-LFTLALGIKANTLTNALKYSLATGNWGDQKKAMSSTAGVSQVLNRYTFAST 285

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 286 LSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 325

[185][TOP]
>UniRef100_Q55U25 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
           RepID=Q55U25_CRYNE
          Length = 1245

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 56/160 (35%), Positives = 84/160 (52%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA FL YMV  L +A  GR++ D+RD F NKR +LA  L+     V F   R+ M + 
Sbjct: 399 SKKAYFLGYMVHRLCMAALGRKELDDRDHFGNKRLDLAGPLMAEMFNVVFGKLREDMYRY 458

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           L++ +  +++   +   +  + IT+GL+ A +TG W    KR    +GV   L R     
Sbjct: 459 LKKCVEQNKEF-ALNMAIRPNTITDGLKYALATGNWG---KRDNTRAGVSQVLNRYTFAS 514

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           T++ LRRT   +    K    R  H +HWG VC   TP+G
Sbjct: 515 TLSHLRRTNTPIGRDSKAAKPRQLHNTHWGMVCPAETPEG 554

[186][TOP]
>UniRef100_Q207G7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Polyporus squamosus
           RepID=Q207G7_9APHY
          Length = 898

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 54/161 (33%), Positives = 83/161 (51%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA F  YM+  LLLA   RR  D+RD F  KR +LA  LL    ++ F    K + + 
Sbjct: 152 SKKAYFFGYMIHRLLLAALERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRH 211

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           LQ+ +  +++   +   +  + ITNGL+ + +TG W    K +   +GV   L R     
Sbjct: 212 LQKCVEMNKEFN-LSLAVKHNTITNGLKYSLATGNWGDQKKSMSAKAGVSQVLNRYTYAS 270

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 271 TLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQ 311

[187][TOP]
>UniRef100_A8N2R8 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea
           okayama7#130 RepID=A8N2R8_COPC7
          Length = 1222

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 54/161 (33%), Positives = 82/161 (50%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA F  YM+  LLLA   RR+ D+RD F  KR +LA  LL    ++ F    K + + 
Sbjct: 378 SKKAYFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRY 437

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           LQ+ +   ++   +   +    ITNGL+ + +TG W    K +   +GV   L R     
Sbjct: 438 LQKCVETHKEFN-LSLAVKHQTITNGLKYSLATGNWGDQKKSMSSKAGVSQVLNRYTYAS 496

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 497 TLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQ 537

[188][TOP]
>UniRef100_UPI000180B7B7 PREDICTED: similar to POLR2B protein n=1 Tax=Ciona intestinalis
           RepID=UPI000180B7B7
          Length = 1173

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 56/159 (35%), Positives = 82/159 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LL A  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 360 KKAYFLGYMVHRLLSAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFRNLMKEVRLYA 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   IIT+GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LELAIKTRIITDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTYAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H S WG +C   TP+G
Sbjct: 479 LSHLRRLNSPIGRDGKLAKPRQLHNSLWGMICPAETPEG 517

[189][TOP]
>UniRef100_UPI0000D5712C PREDICTED: similar to AGAP003648-PA n=1 Tax=Tribolium castaneum
           RepID=UPI0000D5712C
          Length = 1175

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 54/159 (33%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 360 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYA 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   ++  +   +IT+GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LDLAIKTKLITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG +C   TP+G
Sbjct: 479 LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEG 517

[190][TOP]
>UniRef100_Q27670 DNA-directed RNA polymerase (Fragment) n=1 Tax=Helobdella stagnalis
           RepID=Q27670_9ANNE
          Length = 859

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 56/159 (35%), Positives = 82/159 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 167 RKAYFLGYMVHRLLLAALGRREVDDRDHYGNKRLDLAGPLLAYLFRGLFRNLSKEIRLYA 226

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +    IT+GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 227 QKFIDRGKDFN-LELAIKTRTITDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 285

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG +C   TP+G
Sbjct: 286 LSHLRRLNSPIGRDGKLARPRQLHNTLWGMICPAETPEG 324

[191][TOP]
>UniRef100_B7QNH8 DNA-directed RNA polymerase n=1 Tax=Ixodes scapularis
           RepID=B7QNH8_IXOSC
          Length = 1142

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 54/159 (33%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA +L YMV  LLLA  GRR+ D+RD + NKR +LA  L+    +  F +  K +    
Sbjct: 360 KKAYYLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLMAFLFRGLFRNLTKEVRMYA 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   IIT+GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LELAIKTRIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTYAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG +C   TP+G
Sbjct: 479 LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEG 517

[192][TOP]
>UniRef100_A9UUX4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis
           RepID=A9UUX4_MONBE
          Length = 1166

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 54/158 (34%), Positives = 80/158 (50%)
 Frame = +2

Query: 92  KARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKALQ 271
           KA FL YMV   L A   RR+ D+RD + NKR +LA  L+    +  F    K++++ + 
Sbjct: 351 KAFFLGYMVHRTLQAALRRRELDDRDHYGNKRLDLAGSLVAYLFRTLFKQLTKKLTRKVT 410

Query: 272 RDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTM 451
             +N +     I   LD  I+ +GL+ + +TG W    K  E  +GV   L R     T+
Sbjct: 411 DLVNRNHKFMVIT-LLDVEILGSGLRYSLATGNWGDQKKAHEARAGVSQVLNRLTFASTL 469

Query: 452 AELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           + LRR    +  TGK+   R  H +HWG +C   TP+G
Sbjct: 470 SHLRRLNSPIDRTGKIAKPRQLHNTHWGYICPAETPEG 507

[193][TOP]
>UniRef100_A1YIE5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis
           RepID=A1YIE5_MONBE
          Length = 904

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 54/158 (34%), Positives = 80/158 (50%)
 Frame = +2

Query: 92  KARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKALQ 271
           KA FL YMV   L A   RR+ D+RD + NKR +LA  L+    +  F    K++++ + 
Sbjct: 174 KAFFLGYMVHRTLQAALRRRELDDRDHYGNKRLDLAGSLVAYLFRTLFKQLTKKLTRKVT 233

Query: 272 RDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTM 451
             +N +     I   LD  I+ +GL+ + +TG W    K  E  +GV   L R     T+
Sbjct: 234 DLVNRNHKFMVIT-LLDVEILGSGLRYSLATGNWGDQKKAHEARAGVSQVLNRLTFASTL 292

Query: 452 AELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           + LRR    +  TGK+   R  H +HWG +C   TP+G
Sbjct: 293 SHLRRLNSPIDRTGKIAKPRQLHNTHWGYICPAETPEG 330

[194][TOP]
>UniRef100_Q9UVA3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Agaricus bisporus
           RepID=Q9UVA3_AGABI
          Length = 914

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 54/161 (33%), Positives = 82/161 (50%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA F  YM+  LLLA   RR+ D+RD F  KR +LA  LL    ++ F    K + + 
Sbjct: 164 SKKAYFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRY 223

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           LQ+ +   ++   +   +    ITNGL+ + +TG W    K +   +GV   L R     
Sbjct: 224 LQKCVETHKEFN-LALAVKHQTITNGLKYSLATGNWGDQKKSMSSKAGVSQVLNRYTYAS 282

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 283 TLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQ 323

[195][TOP]
>UniRef100_Q9UV90 DNA-directed RNA polymerase (Fragment) n=1 Tax=Capronia pilosella
           RepID=Q9UV90_9EURO
          Length = 937

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 55/166 (33%), Positives = 83/166 (50%)
 Frame = +2

Query: 71  GSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARK 250
           G     RKA FL YMV  LL    GR + D+RD    KR +LA  L+    ++ F  A K
Sbjct: 165 GPDATARKAFFLGYMVNRLLKCALGRAEPDDRDHLGKKRLDLAGPLMTNLFRLQFDKATK 224

Query: 251 RMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGR 430
              + +Q+ +  ++ +  +  +    IIT+GL+ + +TG W    K  +  +GV   L R
Sbjct: 225 DFYRYMQKRVESNQPINIMAGFKHP-IITSGLKYSLATGNWGDQKKLDKAKAGVSQVLSR 283

Query: 431 TNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
                T++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 284 YTFASTLSHLRRTNAPIGREGKIAKPRQLHNTHWGYVCPAETPEGQ 329

[196][TOP]
>UniRef100_Q9UV78 DNA-directed RNA polymerase (Fragment) n=1 Tax=Morchella elata
           RepID=Q9UV78_9PEZI
          Length = 927

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 60/187 (32%), Positives = 90/187 (48%)
 Frame = +2

Query: 8   KGIQYGPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKR 187
           K I+Y      +E L  ++        RKA FL YMV  +L     RR+ D+RD F  KR
Sbjct: 143 KRIRYARDIMQKELLP-HISQSEGSETRKAFFLGYMVHRMLQCALERREVDDRDHFGKKR 201

Query: 188 FELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTG 367
            +LA  LL    +  +    K + K L++ +   +D   +   + ++ ITNGL+ + +TG
Sbjct: 202 LDLAGPLLAGLFRTLWKKLTKDVYKYLEKCVETGKDFN-LTLAVKSNTITNGLKYSLATG 260

Query: 368 AWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCF 547
            W    K     +GV   L R     T++ LRRT   +   GK+   R  H +HWG VC 
Sbjct: 261 NWGEQKKAASSKAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCP 320

Query: 548 LSTPDGE 568
             TP+G+
Sbjct: 321 AETPEGQ 327

[197][TOP]
>UniRef100_Q873V7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Chondrostereum
           purpureum RepID=Q873V7_9AGAR
          Length = 770

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 54/161 (33%), Positives = 82/161 (50%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA F  YM+  LLLA   RR+ D+RD F  KR +LA  LL    ++ F    K + + 
Sbjct: 155 SKKAYFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRY 214

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           LQ+ +   ++   +   +    ITNGL+ + +TG W    K +   +GV   L R     
Sbjct: 215 LQKCVETHKEFN-LSLAVKHQTITNGLKYSLATGNWGDQKKSMASKAGVSQVLNRYTYAS 273

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 274 TLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQ 314

[198][TOP]
>UniRef100_Q873U3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Lycoperdon pyriforme
           RepID=Q873U3_9AGAR
          Length = 849

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 54/161 (33%), Positives = 82/161 (50%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA F  YM+  LLLA   RR+ D+RD F  KR +LA  LL    ++ F    K + + 
Sbjct: 139 SKKAYFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRY 198

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           LQ+ +   ++   +   +    ITNGL+ + +TG W    K +   +GV   L R     
Sbjct: 199 LQKCVETHKEFN-LALAVKHQTITNGLKYSLATGNWGDQKKSMSSKAGVSQVLNRYTYAS 257

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 258 TLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQ 298

[199][TOP]
>UniRef100_Q6RYI7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Baeomyces sp. SLJ472
           RepID=Q6RYI7_9LECA
          Length = 894

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 54/160 (33%), Positives = 83/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  +L    GRR+ D+RD F  KR +LA  L+    ++ F    K +   L
Sbjct: 160 RKAFFLGYMVHRMLQVVLGRREPDDRDHFGKKRLDLAGPLMAGLFRMLFNKLVKDVYNYL 219

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           ++ +  +R+   +   + ++ +TNGL+ + +TG W    K     +GV   L R     T
Sbjct: 220 KKCVESNREFN-LSLGVKSTTLTNGLKYSLATGNWGDQKKAASSKAGVSQVLNRYTFAST 278

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 279 LSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 318

[200][TOP]
>UniRef100_Q6RYG1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Xanthoria polycarpa
           RepID=Q6RYG1_9LECA
          Length = 893

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 54/160 (33%), Positives = 82/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YM+  +L    GRR  D+RD F  KR +LA  LL    ++ F    K + K L
Sbjct: 159 RKAFFLGYMIHRMLQCALGRRDVDDRDHFGKKRLDLAGPLLAGLFRMLFQKLTKDIYKYL 218

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ +  +R+   +   +  + +++GL+ + +TG W    K     +GV   L R     T
Sbjct: 219 QKCVESNREFN-LALGVKQNTLSSGLKYSLATGNWGDQKKAASAKAGVSQVLNRYTFAST 277

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 278 LSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQ 317

[201][TOP]
>UniRef100_Q5UVK0 RNA polymerase II subunit (Fragment) n=1 Tax=Lasiosphaeria rugulosa
           RepID=Q5UVK0_9PEZI
          Length = 593

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 59/165 (35%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR  D+RD F  KR +LA  LL +     F    +RM++ L
Sbjct: 165 RKAFFLGYMVHKLLQCVLGRRDTDDRDHFGKKRLDLAGPLLAKL----FRSVVRRMTQDL 220

Query: 269 QRDLNGDRDVRPIEHY-----LDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRT 433
              +   R +   +H+     + +S +TN L+ + +TG W    K +  T+GV   L R 
Sbjct: 221 MSYMK--RCIDTNKHFSLALGIKSSSLTNALKYSLATGNWGDQKKAMSSTAGVSQVLNRY 278

Query: 434 NPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
               T++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 279 TFASTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 323

[202][TOP]
>UniRef100_Q5UVJ9 RNA polymerase II subunit (Fragment) n=1 Tax=Lasiosphaeria rugulosa
           RepID=Q5UVJ9_9PEZI
          Length = 597

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 59/165 (35%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR  D+RD F  KR +LA  LL +     F    +RM++ L
Sbjct: 167 RKAFFLGYMVHKLLQCVLGRRDTDDRDHFGKKRLDLAGPLLAKL----FRSVVRRMTQDL 222

Query: 269 QRDLNGDRDVRPIEHY-----LDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRT 433
              +   R +   +H+     + +S +TN L+ + +TG W    K +  T+GV   L R 
Sbjct: 223 MSYMK--RCIDTNKHFSLALGIKSSSLTNALKYSLATGNWGDQKKAMSSTAGVSQVLNRY 280

Query: 434 NPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
               T++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 281 TFASTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 325

[203][TOP]
>UniRef100_Q5S3M2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phyllotopsis sp.
           MB35 RepID=Q5S3M2_9APHY
          Length = 889

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 54/161 (33%), Positives = 82/161 (50%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA F  YM+  LLLA   RR+ D+RD F  KR +LA  LL    ++ F    K + + 
Sbjct: 146 SKKAYFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRY 205

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           LQ+ +   ++   +   +    ITNGL+ + +TG W    K +   +GV   L R     
Sbjct: 206 LQKCVETHKEFN-LALAVKHQTITNGLKYSLATGNWGDQKKSMSSKAGVSQVLNRYTYAS 264

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 265 TLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQ 305

[204][TOP]
>UniRef100_Q5S3L8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Strobilomyces
           floccopus RepID=Q5S3L8_9HOMO
          Length = 908

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 54/161 (33%), Positives = 82/161 (50%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA F  YM+  LLLA   RR+ D+RD F  KR +LA  LL    ++ F    K + + 
Sbjct: 151 SKKAYFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFKKLTKDVYRY 210

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           LQ+ +   ++   +   +    ITNGL+ + +TG W    K +   +GV   L R     
Sbjct: 211 LQKCVETHKEFN-LSLAVKHQTITNGLKYSLATGNWGDQKKSMASKAGVSQVLNRYTYAS 269

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 270 TLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQ 310

[205][TOP]
>UniRef100_Q5S2C2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Boletellus
           projectellus RepID=Q5S2C2_9HOMO
          Length = 899

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 54/161 (33%), Positives = 82/161 (50%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA F  YM+  LLLA   RR+ D+RD F  KR +LA  LL    ++ F    K + + 
Sbjct: 160 SKKAYFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFKKLTKDVYRY 219

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           LQ+ +   ++   +   +    ITNGL+ + +TG W    K +   +GV   L R     
Sbjct: 220 LQKCVETHKEFN-LSLAVKHQTITNGLKYSLATGNWGDQKKSMASKAGVSQVLNRYTYAS 278

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 279 TLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQ 319

[206][TOP]
>UniRef100_Q27S75 DNA-directed RNA polymerase (Fragment) n=1 Tax=Macrolepiota
           dolichaula RepID=Q27S75_9AGAR
          Length = 882

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 54/161 (33%), Positives = 82/161 (50%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA F  YM+  LLLA   RR+ D+RD F  KR +LA  LL    ++ F    K + + 
Sbjct: 147 SKKAYFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRY 206

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           LQ+ +   ++   +   +    ITNGL+ + +TG W    K +   +GV   L R     
Sbjct: 207 LQKCVETHKEFN-LALAVKHQTITNGLKYSLATGNWGDQKKSMSSKAGVSQVLNRYTYAS 265

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 266 TLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQ 306

[207][TOP]
>UniRef100_Q207G6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pycnoporus sp.
           ZW02.30 RepID=Q207G6_9APHY
          Length = 896

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 54/161 (33%), Positives = 82/161 (50%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA F  YM+  LLLA   RR  D+RD F  KR +LA  LL    ++ F    K + + 
Sbjct: 152 SKKAYFFGYMIHRLLLAALERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRY 211

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           LQ+ +   ++   +   +  + ITNGL+ + +TG W    K +   +GV   L R     
Sbjct: 212 LQKCVETHKEFN-LSLAVKHNTITNGLKYSLATGNWGDQKKSMSSKAGVSQVLNRYTYAS 270

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 271 TLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQ 311

[208][TOP]
>UniRef100_B6RQS5 RNA polymerase II subunit 2 (Fragment) n=1 Tax=Agaricus sp. JB-101
           RepID=B6RQS5_9AGAR
          Length = 410

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 54/161 (33%), Positives = 82/161 (50%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA F  YM+  LLLA   RR+ D+RD F  KR +LA  LL    ++ F    K + + 
Sbjct: 46  SKKAYFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRY 105

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           LQ+ +   ++   +   +    ITNGL+ + +TG W    K +   +GV   L R     
Sbjct: 106 LQKCVETHKEFN-LALAVKHQTITNGLKYSLATGNWGDQKKSMSSKAGVSQVLNRYTYAS 164

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 165 TLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQ 205

[209][TOP]
>UniRef100_B6RQS4 RNA polymerase II subunit 2 (Fragment) n=1 Tax=Agaricus sp. JB-101
           RepID=B6RQS4_9AGAR
          Length = 368

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 54/161 (33%), Positives = 82/161 (50%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA F  YM+  LLLA   RR+ D+RD F  KR +LA  LL    ++ F    K + + 
Sbjct: 46  SKKAYFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRY 105

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           LQ+ +   ++   +   +    ITNGL+ + +TG W    K +   +GV   L R     
Sbjct: 106 LQKCVETHKEFN-LALAVKHQTITNGLKYSLATGNWGDQKKSMSSKAGVSQVLNRYTYAS 164

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 165 TLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQ 205

[210][TOP]
>UniRef100_B0CRB3 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82
           RepID=B0CRB3_LACBS
          Length = 942

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 54/161 (33%), Positives = 82/161 (50%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA F  YM+  LLLA   RR+ D+RD F  KR +LA  LL    ++ F    K + + 
Sbjct: 157 SKKAYFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRY 216

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           LQ+ +   ++   +   +    ITNGL+ + +TG W    K +   +GV   L R     
Sbjct: 217 LQKCVETHKEFN-LALAVKHQTITNGLKYSLATGNWGDQKKSMSSKAGVSQVLNRYTYAS 275

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 276 TLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQ 316

[211][TOP]
>UniRef100_Q27446 DNA-directed RNA polymerase (Fragment) n=1 Tax=Artemia salina
           RepID=Q27446_ARTSA
          Length = 862

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 55/159 (34%), Positives = 81/159 (50%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  L+    +  F    K +    
Sbjct: 167 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLMSLLFRGLFKTLTKEVRMYA 226

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   IE  +    IT+GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 227 QKFIDRGKDFN-IELAIKPKFITDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 285

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG +C   TP+G
Sbjct: 286 LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEG 324

[212][TOP]
>UniRef100_Q6RYH8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Filobasidiella
           neoformans RepID=Q6RYH8_CRYNE
          Length = 1114

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 56/160 (35%), Positives = 83/160 (51%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA FL YMV  L +A  GRR+ D+RD F NKR +LA  L+     V F   R+ M + 
Sbjct: 391 SKKAYFLGYMVHRLCMAALGRRELDDRDHFGNKRLDLAGPLMAEMFNVVFGKLREDMYRY 450

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           L++ +  +++   +   +  + IT+GL+ A +TG W    KR    +GV   L       
Sbjct: 451 LKKCVEQNKEF-ALNMAIRPNTITDGLKYALATGNWG---KRDNTRAGVSQVLNSYTFTS 506

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           T++ LRRT   +    K    R  H +HWG VC   TP+G
Sbjct: 507 TLSHLRRTNTPIGRDSKAAKPRQLHDTHWGMVCPAETPEG 546

[213][TOP]
>UniRef100_Q5UVL6 RNA polymerase II subunit (Fragment) n=2 Tax=Lasiosphaeria glabrata
           RepID=Q5UVL6_9PEZI
          Length = 599

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 59/165 (35%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR  D+RD F  KR +LA  LL +     F    +RM++ L
Sbjct: 169 RKAFFLGYMVHKLLQCVLGRRDTDDRDHFGKKRLDLAGPLLAKL----FRSVVRRMTQDL 224

Query: 269 QRDLNGDRDVRPIEHY-----LDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRT 433
              +   R +   +H+     + +S +TN L+ + +TG W    K +  T+GV   L R 
Sbjct: 225 MGYMK--RCIDTNKHFSLALGIKSSSLTNALKYSLATGNWGDQKKAMSSTAGVSQVLNRY 282

Query: 434 NPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
               T++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 283 TFASTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 327

[214][TOP]
>UniRef100_Q5U7W8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Albatrellus
           higanensis RepID=Q5U7W8_9HOMO
          Length = 913

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 54/161 (33%), Positives = 82/161 (50%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA F  YM+  LLLA   RR  D+RD F  KR +LA  LL    ++ F    K + + 
Sbjct: 151 SKKAYFFGYMIHRLLLAALERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRY 210

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           LQ+ +   ++   +   +  + ITNGL+ + +TG W    K +   +GV   L R     
Sbjct: 211 LQKCVETHKEFN-LSLAVKHNTITNGLKYSLATGNWGDQKKSMASKAGVSQVLNRYTYAS 269

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 270 TLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQ 310

[215][TOP]
>UniRef100_Q207G9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Laetiporus
           sulphureus RepID=Q207G9_9APHY
          Length = 897

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 54/161 (33%), Positives = 82/161 (50%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA F  YM+  LLLA   RR  D+RD F  KR +LA  LL    ++ F    K + + 
Sbjct: 151 SKKAYFFGYMIHRLLLAAMERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRY 210

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           LQ+ +   ++   +   +  + ITNGL+ + +TG W    K +   +GV   L R     
Sbjct: 211 LQKCVETHKEFN-LNLAVKHNTITNGLKYSLATGNWGDQKKSMASKAGVSQVLNRYTYAS 269

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 270 TLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQ 310

[216][TOP]
>UniRef100_Q207G4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Spongipellis
           pachyodon RepID=Q207G4_9APHY
          Length = 901

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 54/161 (33%), Positives = 82/161 (50%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA F  YM+  LLLA   RR+ D+RD F  KR +LA  LL    ++ F    K + + 
Sbjct: 155 SKKAYFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRY 214

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           LQ+ +   ++   +   +  + ITNGL+ + +TG W    K +   +GV   L R     
Sbjct: 215 LQKCVETHKEFN-LSLAVKHNTITNGLKYSLATGNWGDQKKSMASKAGVSQVLNRYTYAS 273

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRR    +   GK+   R  H  HWG VC   TP+G+
Sbjct: 274 TLSHLRRCNTPLGREGKIAKPRQLHNHHWGMVCPAETPEGQ 314

[217][TOP]
>UniRef100_Q207G2 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Trametes versicolor RepID=Q207G2_TRAVE
          Length = 518

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 55/164 (33%), Positives = 84/164 (51%), Gaps = 3/164 (1%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA F  YM+  LLLA   RR  D+RD F  KR +LA  LL    ++ F    K + + 
Sbjct: 141 SKKAYFFGYMIHRLLLAAFERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRY 200

Query: 266 LQRDLNGDRDVR---PIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTN 436
           LQ+ +   ++ +    ++H    + ITNGL+ + +TG W    K +   +GV   L R  
Sbjct: 201 LQKCVETHKEFQLGLAVKH----NTITNGLKYSLATGNWGDQKKTMSSKAGVSQVLNRYT 256

Query: 437 PLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
              T++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 257 YASTLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQ 300

[218][TOP]
>UniRef100_Q1WNB2 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Coprinellus disseminatus RepID=Q1WNB2_COPDI
          Length = 187

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 54/161 (33%), Positives = 82/161 (50%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA F  YM+  LLLA   RR+ D+RD F  KR +LA  LL    ++ F    K + + 
Sbjct: 18  SKKAYFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLAGLFRMLFRKLTKDVYRY 77

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           LQ+ +   ++   +   +    ITNGL+ + +TG W    K +   +GV   L R     
Sbjct: 78  LQKCVETHKEFN-LTLAVKQQTITNGLKYSLATGNWGDQKKTMSSKAGVSQVLNRYTYAS 136

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 137 TLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQ 177

[219][TOP]
>UniRef100_Q1WMR3 DNA-directed RNA polymerase n=1 Tax=Coprinellus disseminatus
           RepID=Q1WMR3_COPDI
          Length = 1241

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 54/161 (33%), Positives = 82/161 (50%)
 Frame = +2

Query: 86  NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKA 265
           ++KA F  YM+  LLLA   RR+ D+RD F  KR +LA  LL    ++ F    K + + 
Sbjct: 396 SKKAYFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLAGLFRMLFRKLTKDVYRY 455

Query: 266 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 445
           LQ+ +   ++   +   +    ITNGL+ + +TG W    K +   +GV   L R     
Sbjct: 456 LQKCVETHKEFN-LTLAVKQQTITNGLKYSLATGNWGDQKKTMSSKAGVSQVLNRYTYAS 514

Query: 446 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           T++ LRR    +   GK+   R  H +HWG VC   TP+G+
Sbjct: 515 TLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQ 555

[220][TOP]
>UniRef100_B2ADP9 DNA-directed RNA polymerase n=2 Tax=Podospora anserina
           RepID=B2ADP9_PODAN
          Length = 1278

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 59/165 (35%), Positives = 83/165 (50%), Gaps = 5/165 (3%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           RKA FL YMV  LL    GRR  D+RD F  KR +LA  LL +     F    +RM++ L
Sbjct: 419 RKAFFLGYMVNKLLQCALGRRDTDDRDHFGKKRLDLAGPLLAKL----FRGVVRRMTQDL 474

Query: 269 QRDLNGDRDVRPIEHY-----LDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRT 433
              +    D    +H+     + A+ +TN L+ + +TG W    K +  T+GV   L R 
Sbjct: 475 MGYMKRCLDTN--KHFTLALGIKANTLTNALKYSLATGNWGDQKKAMSSTAGVSQVLNRY 532

Query: 434 NPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
               T++ LRRT   +   GK+   R  H +HWG VC   TP+G+
Sbjct: 533 TFASTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 577

[221][TOP]
>UniRef100_UPI0001B09250 DNA directed RNA polymerase II polypeptide B n=1 Tax=Danio rerio
           RepID=UPI0001B09250
          Length = 1174

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 360 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYA 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 479 LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 517

[222][TOP]
>UniRef100_UPI000194C2A3 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide B, 140kDa
           n=1 Tax=Taeniopygia guttata RepID=UPI000194C2A3
          Length = 1174

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 360 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYA 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 479 LSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 517

[223][TOP]
>UniRef100_UPI00017937B7 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide n=1 Tax=Acyrthosiphon pisum
           RepID=UPI00017937B7
          Length = 1101

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 54/159 (33%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 361 KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYA 420

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   ++  +   +IT+GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 421 QKFIDRGKDFN-LDLAIKTKLITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 479

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG +C   TP+G
Sbjct: 480 LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEG 518

[224][TOP]
>UniRef100_UPI00015B44D8 PREDICTED: similar to ENSANGP00000011389 n=1 Tax=Nasonia
           vitripennis RepID=UPI00015B44D8
          Length = 1175

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 55/160 (34%), Positives = 83/160 (51%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LL A  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 360 KKAYFLGYMVHRLLSASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYA 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   IIT+GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 568
           ++ LRR    +   GK+   R  H + WG +C   TP+G+
Sbjct: 479 LSHLRRVNSPIGRDGKLARPRQLHNTLWGMLCPAETPEGQ 518

[225][TOP]
>UniRef100_UPI000155BCC7 PREDICTED: similar to RNA polymerase II 140 kDa subunit, partial
           n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BCC7
          Length = 951

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 360 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYA 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 479 LSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 517

[226][TOP]
>UniRef100_UPI0000F2D75F PREDICTED: similar to RNA polymerase II 140 kDa subunit n=1
           Tax=Monodelphis domestica RepID=UPI0000F2D75F
          Length = 1174

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 360 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYA 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 479 LSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 517

[227][TOP]
>UniRef100_UPI0000E20419 PREDICTED: DNA directed RNA polymerase II polypeptide B isoform 1
           n=1 Tax=Pan troglodytes RepID=UPI0000E20419
          Length = 1099

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 285 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYA 344

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 345 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 403

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 404 LSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 442

[228][TOP]
>UniRef100_P30876 DNA-directed RNA polymerase II subunit RPB2 n=2 Tax=Catarrhini
           RepID=RPB2_HUMAN
          Length = 1174

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 360 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYA 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 479 LSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 517

[229][TOP]
>UniRef100_UPI00005A2A5D PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           17 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5D
          Length = 1099

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 285 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYA 344

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 345 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 403

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 404 LSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 442

[230][TOP]
>UniRef100_UPI00005A2A5C PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           16 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5C
          Length = 1173

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 360 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYA 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 479 LSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 517

[231][TOP]
>UniRef100_UPI00005A2A5B PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           15 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5B
          Length = 1179

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 360 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYA 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 479 LSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 517

[232][TOP]
>UniRef100_UPI00005A2A5A PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           14 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5A
          Length = 1175

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 360 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYA 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 479 LSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 517

[233][TOP]
>UniRef100_UPI00005A2A59 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           13 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A59
          Length = 1180

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 360 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYA 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 479 LSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 517

[234][TOP]
>UniRef100_UPI00005A2A58 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           12 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A58
          Length = 1174

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 361 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYA 420

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 421 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 479

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 480 LSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 518

[235][TOP]
>UniRef100_UPI00005A2A57 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           11 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A57
          Length = 1180

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 360 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYA 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 479 LSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 517

[236][TOP]
>UniRef100_UPI00005A2A56 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           10 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A56
          Length = 1166

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 355 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYA 414

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 415 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 473

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 474 LSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 512

[237][TOP]
>UniRef100_UPI00005A2A55 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           9 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A55
          Length = 1182

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 356 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYA 415

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 416 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 474

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 475 LSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 513

[238][TOP]
>UniRef100_UPI00005A2A54 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           8 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A54
          Length = 1173

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 360 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYA 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 479 LSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 517

[239][TOP]
>UniRef100_UPI00005A2A52 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           6 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A52
          Length = 1162

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 360 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYA 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 479 LSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 517

[240][TOP]
>UniRef100_UPI00005A2A51 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
           polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
           5 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A51
          Length = 932

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 360 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYA 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 479 LSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 517

[241][TOP]
>UniRef100_UPI00006A01AA DNA-directed RNA polymerase II subunit RPB2 (EC 2.7.7.6) (RNA
           polymerase II subunit B2) (DNA-directed RNA polymerase
           II subunit B) (RNA polymerase II subunit 2)
           (DNA-directed RNA polymerase II 140 kDa polypeptide).
           n=1 Tax=Xenopus (Silurana) tropicalis
           RepID=UPI00006A01AA
          Length = 927

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 360 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYA 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 479 LSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 517

[242][TOP]
>UniRef100_UPI00017B4CC9 UPI00017B4CC9 related cluster n=1 Tax=Tetraodon nigroviridis
           RepID=UPI00017B4CC9
          Length = 1147

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 333 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYA 392

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 393 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFAST 451

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 452 LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 490

[243][TOP]
>UniRef100_UPI00016DFC9D UPI00016DFC9D related cluster n=1 Tax=Takifugu rubripes
           RepID=UPI00016DFC9D
          Length = 1045

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 169 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYA 228

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 229 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFAST 287

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 288 LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 326

[244][TOP]
>UniRef100_UPI0000EB23D9 DNA-directed RNA polymerase II subunit RPB2 (EC 2.7.7.6) (RNA
           polymerase II subunit B2) (DNA-directed RNA polymerase
           II subunit B) (RNA polymerase II subunit 2)
           (DNA-directed RNA polymerase II 140 kDa polypeptide).
           n=1 Tax=Canis lupus familiaris RepID=UPI0000EB23D9
          Length = 1176

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 360 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYA 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 479 LSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 517

[245][TOP]
>UniRef100_UPI0000F3357E UPI0000F3357E related cluster n=1 Tax=Bos taurus
           RepID=UPI0000F3357E
          Length = 1177

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 361 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYA 420

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 421 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 479

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 480 LSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 518

[246][TOP]
>UniRef100_UPI00003AD7E4 polymerase (RNA) II (DNA directed) polypeptide B, 140kDa n=1
           Tax=Gallus gallus RepID=UPI00003AD7E4
          Length = 1174

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 360 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYA 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 479 LSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 517

[247][TOP]
>UniRef100_Q6DRH1 RNA polymerase II subunit B (Fragment) n=1 Tax=Danio rerio
           RepID=Q6DRH1_DANRE
          Length = 562

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 360 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYA 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 479 LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 517

[248][TOP]
>UniRef100_Q5ZMN9 DNA-directed RNA polymerase n=1 Tax=Gallus gallus
           RepID=Q5ZMN9_CHICK
          Length = 1174

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 360 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYA 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 479 LSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 517

[249][TOP]
>UniRef100_Q4T1Y4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon
           nigroviridis RepID=Q4T1Y4_TETNG
          Length = 1217

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 333 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYA 392

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 393 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFAST 451

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 452 LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 490

[250][TOP]
>UniRef100_C0HA74 DNA-directed RNA polymerase n=1 Tax=Salmo salar RepID=C0HA74_SALSA
          Length = 1174

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 56/159 (35%), Positives = 83/159 (52%)
 Frame = +2

Query: 89  RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFELAAELLERELKVHFAHARKRMSKAL 268
           +KA FL YMV  LLLA  GRR+ D+RD + NKR +LA  LL    +  F +  K +    
Sbjct: 360 KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYA 419

Query: 269 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 448
           Q+ ++  +D   +E  +   II++GL+ + +TG W    K  +  +GV   L R     T
Sbjct: 420 QKFIDRGKDFN-LELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFAST 478

Query: 449 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 565
           ++ LRR    +   GK+   R  H + WG VC   TP+G
Sbjct: 479 LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEG 517