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[1][TOP]
>UniRef100_B9RVK0 RNA polymerase sigma factor rpoD, putative n=1 Tax=Ricinus communis
           RepID=B9RVK0_RICCO
          Length = 389

 Score = 87.4 bits (215), Expect = 6e-16
 Identities = 65/168 (38%), Positives = 94/168 (55%), Gaps = 10/168 (5%)
 Frame = +1

Query: 70  MSLTSLPTFPTLKTHHSHQPSNLPS--KFCTSLVSSD-----ASATEAVALANAAVEAAR 228
           M++T+  T P+L   H    S+  S  KF  SL  S+     A+ATEAVALA+AAVEAA+
Sbjct: 1   MAITTTITIPSLNFQHPSSSSSYYSSCKFSASLAVSNEALSMAAATEAVALASAAVEAAK 60

Query: 229 EAVSAAAELGKEWHLRESDDVMSVGIDTRRKRRRKKRKS-LGCM--EEENQNICLRQSPS 399
           EAV+  +  G+  +           +  RRK+RRK+RK  + C+  EEE  + C  +   
Sbjct: 61  EAVTLVSLSGESGN----------SLVARRKKRRKRRKGFIECLKVEEERDDQC--EGAL 108

Query: 400 VKSGTSGFLSSKEEAELCLSLKEGARIEVANLRITEHEGNPAIPKRFS 543
            +   +G+LSS EEAE CL LK+ AR+E A  RI E + +    K+ +
Sbjct: 109 FQPVNNGYLSSIEEAEFCLCLKDHARVEAARRRIAETQEHEPTSKQLA 156

[2][TOP]
>UniRef100_UPI0001984805 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
           RepID=UPI0001984805
          Length = 426

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 73/173 (42%), Positives = 96/173 (55%), Gaps = 12/173 (6%)
 Frame = +1

Query: 25  MAIAR---LCSSPS-HSPTMSLTSLPTFPTLKTHHSHQPSNLPSKFCTS--LVSSD---- 174
           MAIA    +CSSPS +SP +S  S  T P+LKT + H P  LP    ++  LVS D    
Sbjct: 1   MAIATAIAICSSPSQYSPALS--SFQTTPSLKTLN-HPPLLLPPSPSSTFVLVSDDDAVV 57

Query: 175 -ASATEAVALANAAVEAAREAVSAAAELGKEWHLRESDDVMSVGIDTRRKRRRKKRKSLG 351
            A+A EAVALA+AAVEAAR AV AA E G+E    E      V +      RR+  ++LG
Sbjct: 58  AAAAAEAVALASAAVEAARAAVWAAGEAGEE----EGGGCRVVRV------RRRGVEALG 107

Query: 352 CMEE-ENQNICLRQSPSVKSGTSGFLSSKEEAELCLSLKEGARIEVANLRITE 507
            +E+ + + +      S  +  S  L+ +EEAE CL LKE A +E A  RI E
Sbjct: 108 MVEKWDGEEV---HEVSFGAARSAVLTPREEAEFCLCLKEEAGLEAARRRIAE 157

[3][TOP]
>UniRef100_Q9ZSL6 Sigma-like factor n=1 Tax=Arabidopsis thaliana RepID=Q9ZSL6_ARATH
          Length = 419

 Score = 60.5 bits (145), Expect = 8e-08
 Identities = 57/169 (33%), Positives = 78/169 (46%), Gaps = 7/169 (4%)
 Frame = +1

Query: 28  AIARLCSSPSHSPTMSLTSLPTFPTLKTHHSHQPSNLPSKFCTSLVSSDASATEAVALAN 207
           A A +C SP   PT+S       P L+T H  QPS  PS      +SS  S   + AL  
Sbjct: 9   ATATMCPSPP-VPTIS-------PLLRTTHQCQPS--PS------LSSPFSIKLSTALVC 52

Query: 208 AAVEAAREAVSAAAELGKEWHLRESDDVMSVGIDTRRKRRRKKR---KSLGCMEEENQNI 378
                 R   S+     ++W ++          + RRKRRR++R   + L   EEEN  +
Sbjct: 53  GDTTVDRVVDSSVMIKPEKWGIQS---------EKRRKRRRRRRVGYERLEPEEEENAGV 103

Query: 379 CLRQS----PSVKSGTSGFLSSKEEAELCLSLKEGARIEVANLRITEHE 513
                    P V +  SGFLS  EE +LCL LKEGA++E     + E+E
Sbjct: 104 EAEAETISVPVVGASRSGFLSRLEEVQLCLYLKEGAKLENLGTSVEENE 152

[4][TOP]
>UniRef100_Q9SXP8 RNA polymerase sigma subunit SigD* n=1 Tax=Arabidopsis thaliana
           RepID=Q9SXP8_ARATH
          Length = 267

 Score = 60.5 bits (145), Expect = 8e-08
 Identities = 57/169 (33%), Positives = 78/169 (46%), Gaps = 7/169 (4%)
 Frame = +1

Query: 28  AIARLCSSPSHSPTMSLTSLPTFPTLKTHHSHQPSNLPSKFCTSLVSSDASATEAVALAN 207
           A A +C SP   PT+S       P L+T H  QPS  PS      +SS  S   + AL  
Sbjct: 9   ATATMCPSPP-VPTIS-------PLLRTTHQCQPS--PS------LSSPFSIKLSTALVC 52

Query: 208 AAVEAAREAVSAAAELGKEWHLRESDDVMSVGIDTRRKRRRKKR---KSLGCMEEENQNI 378
                 R   S+     ++W ++          + RRKRRR++R   + L   EEEN  +
Sbjct: 53  GDTTVDRVVDSSVMIKPEKWGIQS---------EKRRKRRRRRRVGYERLEPEEEENAGV 103

Query: 379 CLRQS----PSVKSGTSGFLSSKEEAELCLSLKEGARIEVANLRITEHE 513
                    P V +  SGFLS  EE +LCL LKEGA++E     + E+E
Sbjct: 104 EAEAETISVPVVGASRSGFLSRLEEVQLCLYLKEGAKLENLGTSVEENE 152