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[1][TOP]
>UniRef100_C6TFU4 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TFU4_SOYBN
Length = 208
Score = 246 bits (627), Expect = 1e-63
Identities = 137/187 (73%), Positives = 150/187 (80%), Gaps = 4/187 (2%)
Frame = +3
Query: 12 FHFPSPSPSSHTSSTHSALSLPPFS--LTSTFWGF--KLKHAATSTVSAADNSTNTFRAV 179
F+F S S + S P FS L++TF G LK+AATST S S +T
Sbjct: 5 FNFNSTLRPSCYLPLSPSSSYPHFSNTLSTTFLGHIVTLKYAATST-SNRGRSLST---- 59
Query: 180 RNSWDGPLSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEF 359
R SWDGPLSSVKLIIQGKNL+LTDAVK+HVEDKVGKAVQKHSH+VRE+DVRLS RGGGEF
Sbjct: 60 RMSWDGPLSSVKLIIQGKNLELTDAVKRHVEDKVGKAVQKHSHLVREVDVRLSIRGGGEF 119
Query: 360 GRGPRTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMK 539
GRGPRT RCEVTLFTKRHGVVRAEED+E+TY SIDLVSSIIQRKLRKIKEKVSDHGRHMK
Sbjct: 120 GRGPRTRRCEVTLFTKRHGVVRAEEDAESTYGSIDLVSSIIQRKLRKIKEKVSDHGRHMK 179
Query: 540 GFNRAKV 560
GFNR K+
Sbjct: 180 GFNRLKL 186
[2][TOP]
>UniRef100_C6T7E3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T7E3_SOYBN
Length = 291
Score = 246 bits (627), Expect = 1e-63
Identities = 139/190 (73%), Positives = 153/190 (80%), Gaps = 5/190 (2%)
Frame = +3
Query: 12 FHFPSP-SPSSHTSSTHSALSLPPF--SLTSTFWGFK--LKHAATSTVSAADNSTNTFRA 176
F+F S PS + S+ S+ S P F +L++TF G LK+AATS S S +
Sbjct: 5 FNFNSTLRPSCYHPSSPSS-SYPHFFKTLSTTFLGHTVTLKYAATSA-SIPPRSLSAHM- 61
Query: 177 VRNSWDGPLSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGE 356
SWDGPLSSVKL IQGKNL+LTDAVKQHVEDKVGKAVQKHSH+VRE+DVRLS RGGGE
Sbjct: 62 ---SWDGPLSSVKLTIQGKNLELTDAVKQHVEDKVGKAVQKHSHLVREVDVRLSIRGGGE 118
Query: 357 FGRGPRTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHM 536
FGRGPRT RCEVTLFTKRHGVVRAEED+E+TY SIDLVSSIIQRKLRKIKEKVSDHGRHM
Sbjct: 119 FGRGPRTRRCEVTLFTKRHGVVRAEEDAESTYGSIDLVSSIIQRKLRKIKEKVSDHGRHM 178
Query: 537 KGFNRAKVRE 566
KGFNR KVRE
Sbjct: 179 KGFNRLKVRE 188
[3][TOP]
>UniRef100_B9SEK8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative n=1
Tax=Ricinus communis RepID=B9SEK8_RICCO
Length = 311
Score = 236 bits (601), Expect = 1e-60
Identities = 130/189 (68%), Positives = 145/189 (76%), Gaps = 8/189 (4%)
Frame = +3
Query: 24 SPSPSSHTSSTHSA--------LSLPPFSLTSTFWGFKLKHAATSTVSAADNSTNTFRAV 179
S SP + TSS+ S+ L LP FSL+S F S V +N AV
Sbjct: 19 SLSPKAATSSSCSSICILGSKKLRLPSFSLSSKT-SFLNPLKLGSNVKYFENKRGRRSAV 77
Query: 180 RNSWDGPLSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEF 359
R SW+GPLSSVKLI QGKNL+LTD VK+HVEDKVGKAVQKHSH+VRE+DVRLS RGG EF
Sbjct: 78 RMSWEGPLSSVKLITQGKNLELTDTVKKHVEDKVGKAVQKHSHLVREVDVRLSVRGG-EF 136
Query: 360 GRGPRTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMK 539
G+GP+ RCEVTLFTK+HGV+RAEED+ET YASIDLVSSIIQRKLRKIKEKVSDHGRHMK
Sbjct: 137 GKGPKIRRCEVTLFTKKHGVIRAEEDAETIYASIDLVSSIIQRKLRKIKEKVSDHGRHMK 196
Query: 540 GFNRAKVRE 566
GFNR KVRE
Sbjct: 197 GFNRLKVRE 205
[4][TOP]
>UniRef100_B9I297 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I297_POPTR
Length = 306
Score = 229 bits (583), Expect = 1e-58
Identities = 124/185 (67%), Positives = 142/185 (76%), Gaps = 4/185 (2%)
Frame = +3
Query: 24 SPSPSSHTSSTHSALS----LPPFSLTSTFWGFKLKHAATSTVSAADNSTNTFRAVRNSW 191
SP+P + ++ S +S +P SL S+F G + +A T+ +V+ SW
Sbjct: 21 SPTPPKTSLASSSVISTKTQIPKSSLKSSFLGKNMSFIELGR-TARTPLTHGGCSVKMSW 79
Query: 192 DGPLSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGP 371
DGPL SVKLIIQGKNL+LTD VK+HVEDKVGKAVQKHSH+VRE+DVRLS RGG E G+GP
Sbjct: 80 DGPLHSVKLIIQGKNLELTDTVKRHVEDKVGKAVQKHSHLVREVDVRLSVRGG-ELGKGP 138
Query: 372 RTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNR 551
R RCEVTLFT RHGVVRAEED+ET YASIDLVSSIIQRKLRKIKEK SDHGRHMKGFNR
Sbjct: 139 RIRRCEVTLFTNRHGVVRAEEDAETIYASIDLVSSIIQRKLRKIKEKESDHGRHMKGFNR 198
Query: 552 AKVRE 566
KVRE
Sbjct: 199 LKVRE 203
[5][TOP]
>UniRef100_UPI0001984F94 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001984F94
Length = 298
Score = 222 bits (566), Expect = 1e-56
Identities = 117/193 (60%), Positives = 140/193 (72%), Gaps = 11/193 (5%)
Frame = +3
Query: 21 PSPSPSSHTSSTHSALSLPPFSLTSTFWGFKLKHAATSTVSAADNSTNTFR--------- 173
P PS + T+S H P +S+F + S +S++ ++ +
Sbjct: 4 PFPSAALQTASFHRQYPPSPSPYSSSFLASSKSLRSLSNLSSSSGGSSILKLNATTRQTK 63
Query: 174 --AVRNSWDGPLSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRG 347
AVR SWDGPLSSVKLI+QGKNL+LTD V+ HVE+KVGKAVQKHSH+VRE+DVRLS RG
Sbjct: 64 PLAVRMSWDGPLSSVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRG 123
Query: 348 GGEFGRGPRTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHG 527
G E G+GP+ RCEVTLFTK+HGVVRAEE +ET Y SID+VSSIIQRKLRKIKEK SDHG
Sbjct: 124 G-ELGKGPKIRRCEVTLFTKKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHG 182
Query: 528 RHMKGFNRAKVRE 566
RHMKGFNR KVR+
Sbjct: 183 RHMKGFNRLKVRD 195
[6][TOP]
>UniRef100_Q9FLV3 Similarity to ribosomal protein 30S subunit n=2 Tax=Arabidopsis
thaliana RepID=Q9FLV3_ARATH
Length = 365
Score = 219 bits (557), Expect = 1e-55
Identities = 107/131 (81%), Positives = 121/131 (92%)
Frame = +3
Query: 174 AVRNSWDGPLSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGG 353
AV+ SWDGPL+SVKLIIQGKNL+L++ +KQHVE+KVGK+VQKHSH+VRE+DVRLS RGG
Sbjct: 127 AVKMSWDGPLASVKLIIQGKNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGG- 185
Query: 354 EFGRGPRTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRH 533
EFG+GPR RCEVTLFTK+HGVVRAEED+ET YA IDLVS+IIQRKLRKIKEK SDHGRH
Sbjct: 186 EFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRH 245
Query: 534 MKGFNRAKVRE 566
MKGFNR KVRE
Sbjct: 246 MKGFNRLKVRE 256
[7][TOP]
>UniRef100_A9PJW3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
Populus deltoides RepID=A9PJW3_9ROSI
Length = 268
Score = 219 bits (557), Expect = 1e-55
Identities = 123/189 (65%), Positives = 140/189 (74%), Gaps = 1/189 (0%)
Frame = +3
Query: 3 PLNFHFPSPS-PSSHTSSTHSALSLPPFSLTSTFWGFKLKHAATSTVSAADNSTNTFRAV 179
PL P+PS SS +ST + +P L S F G + A + S ++
Sbjct: 18 PLTSTTPTPSLASSFVNSTKT--QVPKVFLKSRFLGKNVNFAEIRRKTKIPLSHGG-SSI 74
Query: 180 RNSWDGPLSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEF 359
R SWDGPLSSVKLIIQGK+L+L+D VK+HVEDKVGKAVQK SH+VR +DVRLS RGG E
Sbjct: 75 RMSWDGPLSSVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGG-EL 133
Query: 360 GRGPRTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMK 539
G+GPR RCEVTLFTKRHGVVRAEED+ET YASIDL SSIIQRKLRKIK+K SDHGRHMK
Sbjct: 134 GKGPRIRRCEVTLFTKRHGVVRAEEDAETIYASIDLASSIIQRKLRKIKDKESDHGRHMK 193
Query: 540 GFNRAKVRE 566
GFNR KVRE
Sbjct: 194 GFNRLKVRE 202
[8][TOP]
>UniRef100_A9PHY3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=A9PHY3_POPTR
Length = 306
Score = 217 bits (552), Expect = 6e-55
Identities = 122/189 (64%), Positives = 140/189 (74%), Gaps = 1/189 (0%)
Frame = +3
Query: 3 PLNFHFPSPS-PSSHTSSTHSALSLPPFSLTSTFWGFKLKHAATSTVSAADNSTNTFRAV 179
PL P+PS SS +ST + +P L S F G + + S ++
Sbjct: 18 PLTSTTPTPSLASSFVNSTKT--QVPKVFLKSRFLGKNVNFVEIRRKTKIPLSHGG-SSI 74
Query: 180 RNSWDGPLSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEF 359
R SWDGPLSSVKLIIQGK+L+L+D VK+HVEDKVGKAVQK SH+VR +DVRLS RGG E
Sbjct: 75 RMSWDGPLSSVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGG-EL 133
Query: 360 GRGPRTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMK 539
G+GPR RCEVTLFTKRHGVVRAEED+ET +ASIDLVSSIIQRKLRKIK+K SDHGRHMK
Sbjct: 134 GKGPRIRRCEVTLFTKRHGVVRAEEDAETIHASIDLVSSIIQRKLRKIKDKESDHGRHMK 193
Query: 540 GFNRAKVRE 566
GFNR KVRE
Sbjct: 194 GFNRLKVRE 202
[9][TOP]
>UniRef100_Q672Q2 Chloroplast-specific ribosomal protein n=1 Tax=Solanum lycopersicum
RepID=Q672Q2_SOLLC
Length = 311
Score = 212 bits (539), Expect = 2e-53
Identities = 114/184 (61%), Positives = 138/184 (75%), Gaps = 4/184 (2%)
Frame = +3
Query: 27 PSPSSHTSSTHSALSLPPFSLTSTFWGFKLKHAATS----TVSAADNSTNTFRAVRNSWD 194
P+ SS SS+ A + P SLT + + ++A V + T +F VR SWD
Sbjct: 21 PNGSSSYSSSCPATASPALSLTLSSTNSRFLNSAFKMNEINVPVRNRVTKSF-GVRMSWD 79
Query: 195 GPLSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPR 374
GPLSSVKLI+QGKNL+LT AVK +VE+K+GKAVQKHSH+ RE+DVRLS RGG E G+GP+
Sbjct: 80 GPLSSVKLILQGKNLELTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGG-ELGKGPK 138
Query: 375 TSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRA 554
RCEVTLFTK+HGV+RAEED E+ Y SID+VSSIIQRKLRKIKEK SD GRHMKGF+R
Sbjct: 139 IRRCEVTLFTKKHGVIRAEEDGESIYGSIDMVSSIIQRKLRKIKEKDSDRGRHMKGFDRL 198
Query: 555 KVRE 566
KVR+
Sbjct: 199 KVRD 202
[10][TOP]
>UniRef100_P19954 30S ribosomal protein 1, chloroplastic n=1 Tax=Spinacia oleracea
RepID=RR30_SPIOL
Length = 302
Score = 212 bits (539), Expect = 2e-53
Identities = 115/181 (63%), Positives = 137/181 (75%)
Frame = +3
Query: 24 SPSPSSHTSSTHSALSLPPFSLTSTFWGFKLKHAATSTVSAADNSTNTFRAVRNSWDGPL 203
S S S + SST + LS SL STF V + S N V SWDGPL
Sbjct: 18 SLSNSINLSSTPTNLS----SLRSTFTN-SCSLGLNVAVKSVQISRNKPNVVCMSWDGPL 72
Query: 204 SSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSR 383
SSVKLI+QG+NL+++D V+ HVEDKVGK+V KHSH+VRE+DVRLS RGG + +GP+ R
Sbjct: 73 SSVKLILQGRNLEVSDNVRSHVEDKVGKSVAKHSHLVREVDVRLSARGG-DLSKGPKLRR 131
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRAKVR 563
CEVTLFTKRHGV+RAEED+E+ Y+SIDLVSSIIQRKLRKIK+KVSDHGRHMKGFNR+KVR
Sbjct: 132 CEVTLFTKRHGVIRAEEDAESLYSSIDLVSSIIQRKLRKIKDKVSDHGRHMKGFNRSKVR 191
Query: 564 E 566
+
Sbjct: 192 D 192
[11][TOP]
>UniRef100_B9IDE9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IDE9_POPTR
Length = 231
Score = 211 bits (537), Expect = 3e-53
Identities = 106/127 (83%), Positives = 116/127 (91%)
Frame = +3
Query: 186 SWDGPLSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGR 365
SWDGPLSSVKLIIQGK+L+L+D VK+HVEDKVGKAVQK SH+VR +DVRLS RGG E G+
Sbjct: 2 SWDGPLSSVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGG-ELGK 60
Query: 366 GPRTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGF 545
GPR RCEVTLFTKRHGVVRAEED+ET +ASIDLVSSIIQRKLRKIK+K SDHGRHMKGF
Sbjct: 61 GPRIRRCEVTLFTKRHGVVRAEEDAETIHASIDLVSSIIQRKLRKIKDKESDHGRHMKGF 120
Query: 546 NRAKVRE 566
NR KVRE
Sbjct: 121 NRLKVRE 127
[12][TOP]
>UniRef100_A7QEV5 Chromosome chr16 scaffold_86, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QEV5_VITVI
Length = 230
Score = 211 bits (536), Expect = 4e-53
Identities = 103/127 (81%), Positives = 115/127 (90%)
Frame = +3
Query: 186 SWDGPLSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGR 365
SWDGPLSSVKLI+QGKNL+LTD V+ HVE+KVGKAVQKHSH+VRE+DVRLS RGG E G+
Sbjct: 2 SWDGPLSSVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGG-ELGK 60
Query: 366 GPRTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGF 545
GP+ RCEVTLFTK+HGVVRAEE +ET Y SID+VSSIIQRKLRKIKEK SDHGRHMKGF
Sbjct: 61 GPKIRRCEVTLFTKKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGF 120
Query: 546 NRAKVRE 566
NR KVR+
Sbjct: 121 NRLKVRD 127
[13][TOP]
>UniRef100_C9EFD1 Chloroplast ribosomal protein (Fragment) n=1 Tax=Solanum tuberosum
RepID=C9EFD1_SOLTU
Length = 280
Score = 208 bits (529), Expect = 3e-52
Identities = 110/167 (65%), Positives = 130/167 (77%), Gaps = 3/167 (1%)
Frame = +3
Query: 75 PPFSLT--STFWGFKLKHAATSTVSA-ADNSTNTFRAVRNSWDGPLSSVKLIIQGKNLDL 245
P FSLT S+ GF + ++ N VR SWDGPLSSVKLI+QGKNL+L
Sbjct: 9 PAFSLTLSSSNSGFLNSAFKKNEINVPVRNRVKXSFGVRMSWDGPLSSVKLILQGKNLEL 68
Query: 246 TDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCEVTLFTKRHGVVR 425
T AVK +VE+K+GKAVQKHSH+ RE+DVRLS RGG E G+GP+ RCEVTLFTK+HGV+R
Sbjct: 69 TPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGG-ELGKGPKIRRCEVTLFTKKHGVIR 127
Query: 426 AEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRAKVRE 566
AEED+E+ Y SID+VSSIIQRKLRKIKEK SDHGRHMKGF+R KVR+
Sbjct: 128 AEEDAESIYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVRD 174
[14][TOP]
>UniRef100_Q84M68 Os03g0856500 protein n=3 Tax=Oryza sativa RepID=Q84M68_ORYSJ
Length = 309
Score = 185 bits (470), Expect = 2e-45
Identities = 103/180 (57%), Positives = 130/180 (72%), Gaps = 7/180 (3%)
Frame = +3
Query: 24 SPSPSSHTSSTH-SALSLPP-----FSLTSTFWGFKLKHAA-TSTVSAADNSTNTFRAVR 182
+P PS H H L LPP L S F G L AA + AA++ ++ +VR
Sbjct: 12 APPPSHHHHHHHVKQLQLPPSVSVSVPLRSGFLGRALPAAAHPQPLLAAESRRSSAVSVR 71
Query: 183 NSWDGPLSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFG 362
SWDGPLSSV+LI+QG+N+ L + VK+H+E+K G+AV KHS +V+E+DVRLS RGG E
Sbjct: 72 MSWDGPLSSVRLIMQGRNVKLNEKVKEHIEEKAGRAVAKHSQLVKEVDVRLSARGG-ELS 130
Query: 363 RGPRTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKG 542
RGP+ RCE+TLFTKRHGV+RAEED+E+TYASIDL SSII+RKLRKIKEK +D RH+KG
Sbjct: 131 RGPKICRCEITLFTKRHGVIRAEEDAESTYASIDLASSIIKRKLRKIKEKETD-VRHLKG 189
[15][TOP]
>UniRef100_Q10AC8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative,
expressed n=1 Tax=Oryza sativa Japonica Group
RepID=Q10AC8_ORYSJ
Length = 241
Score = 185 bits (470), Expect = 2e-45
Identities = 103/180 (57%), Positives = 130/180 (72%), Gaps = 7/180 (3%)
Frame = +3
Query: 24 SPSPSSHTSSTH-SALSLPP-----FSLTSTFWGFKLKHAA-TSTVSAADNSTNTFRAVR 182
+P PS H H L LPP L S F G L AA + AA++ ++ +VR
Sbjct: 12 APPPSHHHHHHHVKQLQLPPSVSVSVPLRSGFLGRALPAAAHPQPLLAAESRRSSAVSVR 71
Query: 183 NSWDGPLSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFG 362
SWDGPLSSV+LI+QG+N+ L + VK+H+E+K G+AV KHS +V+E+DVRLS RGG E
Sbjct: 72 MSWDGPLSSVRLIMQGRNVKLNEKVKEHIEEKAGRAVAKHSQLVKEVDVRLSARGG-ELS 130
Query: 363 RGPRTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKG 542
RGP+ RCE+TLFTKRHGV+RAEED+E+TYASIDL SSII+RKLRKIKEK +D RH+KG
Sbjct: 131 RGPKICRCEITLFTKRHGVIRAEEDAESTYASIDLASSIIKRKLRKIKEKETD-VRHLKG 189
[16][TOP]
>UniRef100_C6YXL0 Protein kinase n=1 Tax=Oryza sativa Japonica Group
RepID=C6YXL0_ORYSJ
Length = 321
Score = 185 bits (470), Expect = 2e-45
Identities = 103/180 (57%), Positives = 130/180 (72%), Gaps = 7/180 (3%)
Frame = +3
Query: 24 SPSPSSHTSSTH-SALSLPP-----FSLTSTFWGFKLKHAA-TSTVSAADNSTNTFRAVR 182
+P PS H H L LPP L S F G L AA + AA++ ++ +VR
Sbjct: 12 APPPSHHHHHHHVKQLQLPPSVSVSVPLRSGFLGRALPAAAHPQPLLAAESRRSSAVSVR 71
Query: 183 NSWDGPLSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFG 362
SWDGPLSSV+LI+QG+N+ L + VK+H+E+K G+AV KHS +V+E+DVRLS RGG E
Sbjct: 72 MSWDGPLSSVRLIMQGRNVKLNEKVKEHIEEKAGRAVAKHSQLVKEVDVRLSARGG-ELS 130
Query: 363 RGPRTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKG 542
RGP+ RCE+TLFTKRHGV+RAEED+E+TYASIDL SSII+RKLRKIKEK +D RH+KG
Sbjct: 131 RGPKICRCEITLFTKRHGVIRAEEDAESTYASIDLASSIIKRKLRKIKEKETD-VRHLKG 189
[17][TOP]
>UniRef100_C5WRX8 Putative uncharacterized protein Sb01g000590 n=1 Tax=Sorghum
bicolor RepID=C5WRX8_SORBI
Length = 310
Score = 180 bits (456), Expect = 8e-44
Identities = 99/178 (55%), Positives = 128/178 (71%), Gaps = 4/178 (2%)
Frame = +3
Query: 21 PSPSPSSHTSSTHSALSLPPFSLTSTFWGFKLKHAATSTVSAADNSTNTFR----AVRNS 188
PSPS + S + + +L S F G L AA V+ D R +VR +
Sbjct: 7 PSPSAAIARPSHPRSCAAASVALRSGFLGRGL--AAVVPVAVDDPRCRLRRRVSFSVRMA 64
Query: 189 WDGPLSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRG 368
WDGPLSSV+LI+QG+N+ L+D +K+H+EDKVG+AV KH H+VRE+DVRLS RGG E GRG
Sbjct: 65 WDGPLSSVRLIMQGRNVKLSDKLKEHIEDKVGRAVSKHCHLVREVDVRLSARGG-ELGRG 123
Query: 369 PRTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKG 542
P+TSRCE+TLF+KRHGV+RAEED+E+TYASIDL ++II+RKLRKIKEK ++ R G
Sbjct: 124 PKTSRCEITLFSKRHGVLRAEEDAESTYASIDLAAAIIKRKLRKIKEKETEVRRDGDG 181
[18][TOP]
>UniRef100_B6TYP8 Plastid-specific 30S ribosomal protein 1 n=1 Tax=Zea mays
RepID=B6TYP8_MAIZE
Length = 309
Score = 178 bits (452), Expect = 2e-43
Identities = 96/169 (56%), Positives = 126/169 (74%), Gaps = 4/169 (2%)
Frame = +3
Query: 27 PSPSSH-TSSTHSALSLPPFSLTSTFWGFKLKHAATSTVSAADNSTNTFR---AVRNSWD 194
PSPS+ T H+ S SL+ GF L + V A ++T R +VR +WD
Sbjct: 8 PSPSAAITRHIHARRSCAAASLSLRRSGF-LGRVVLAAVPVAVDATRRRRVSVSVRMAWD 66
Query: 195 GPLSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPR 374
GPLSSV+LI+Q +N L++ +K+H+EDKVG+AV KH H+VRE+DVRLS RGG E GRGP+
Sbjct: 67 GPLSSVRLIMQSRNAKLSEKLKEHIEDKVGRAVSKHCHLVREVDVRLSARGG-ELGRGPK 125
Query: 375 TSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSD 521
TSRCE+TLFTKRHGV+RAEED+E+TYASIDL ++I++RKLRKIKEK ++
Sbjct: 126 TSRCEITLFTKRHGVLRAEEDAESTYASIDLAAAIVKRKLRKIKEKETE 174
[19][TOP]
>UniRef100_B8LMC5 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LMC5_PICSI
Length = 321
Score = 172 bits (436), Expect = 2e-41
Identities = 87/126 (69%), Positives = 104/126 (82%)
Frame = +3
Query: 189 WDGPLSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRG 368
W GPLSSV+LIIQGKN LTDAVK ++E+KVG AVQKH+++VRE+DVRLS RGG E G+G
Sbjct: 81 WSGPLSSVRLIIQGKNFQLTDAVKAYIEEKVGIAVQKHANLVREVDVRLSIRGG-EVGKG 139
Query: 369 PRTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFN 548
P+ RCEVTLFTK+HGVVRAEE++ET YASID+VS II+RKLRKIKEK HGR K
Sbjct: 140 PKIRRCEVTLFTKKHGVVRAEEEAETIYASIDIVSDIIRRKLRKIKEKDGGHGRPSKMRK 199
Query: 549 RAKVRE 566
+ K+ E
Sbjct: 200 QPKLGE 205
[20][TOP]
>UniRef100_A9TA00 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9TA00_PHYPA
Length = 297
Score = 155 bits (393), Expect = 2e-36
Identities = 77/118 (65%), Positives = 95/118 (80%)
Frame = +3
Query: 186 SWDGPLSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGR 365
+W G L+ V+L+IQGK+L+LTDA+KQ+VE+KVG AV S +V+E+DVR+S RGG E GR
Sbjct: 80 AWGGTLAGVRLVIQGKHLELTDAIKQYVEEKVGNAVHNQSALVKEVDVRMSVRGG-ETGR 138
Query: 366 GPRTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMK 539
G R RCEVTLFTK+HGVVRAEE++E+ YASID VS +I RKLRKIKEK HGR K
Sbjct: 139 GERLQRCEVTLFTKKHGVVRAEEEAESMYASIDRVSDVISRKLRKIKEKDGGHGRPAK 196
[21][TOP]
>UniRef100_A9RWK9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RWK9_PHYPA
Length = 221
Score = 155 bits (393), Expect = 2e-36
Identities = 77/127 (60%), Positives = 99/127 (77%)
Frame = +3
Query: 186 SWDGPLSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGR 365
+W G L+ V+L+IQGK+L+LTDA+KQ+VE+KVG AV S +V+E+DVR+S RGG E GR
Sbjct: 2 AWGGALAGVRLVIQGKHLELTDAIKQYVEEKVGNAVHNQSALVKEVDVRMSVRGG-ETGR 60
Query: 366 GPRTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGF 545
G + RCEVTLFTK+HGVVRAEE++E+ YASID VS +I RKLRKIKEK HGR K
Sbjct: 61 GGKLQRCEVTLFTKKHGVVRAEEEAESMYASIDRVSDVISRKLRKIKEKDGGHGRPTKSR 120
Query: 546 NRAKVRE 566
+ ++ E
Sbjct: 121 HSPRIGE 127
[22][TOP]
>UniRef100_B9NF07 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NF07_POPTR
Length = 127
Score = 147 bits (371), Expect = 5e-34
Identities = 77/110 (70%), Positives = 88/110 (80%)
Frame = +3
Query: 237 LDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCEVTLFTKRHG 416
+ LTD VK+HVEDKVGKAVQK SH+VRE+D RLS R GGE G+GPR +C RHG
Sbjct: 1 MQLTDTVKEHVEDKVGKAVQKFSHLVREVDARLSVR-GGELGKGPRIRKC-------RHG 52
Query: 417 VVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRAKVRE 566
VVRAEEDSET YA+IDLV SIIQ KLRK+KE+ SDHGRHMKG NR K+R+
Sbjct: 53 VVRAEEDSETIYATIDLVLSIIQSKLRKMKEE-SDHGRHMKGLNRLKIRD 101
[23][TOP]
>UniRef100_A8J8B2 Plastid-specific ribosomal protein 1 n=1 Tax=Chlamydomonas
reinhardtii RepID=A8J8B2_CHLRE
Length = 286
Score = 105 bits (263), Expect = 2e-21
Identities = 53/107 (49%), Positives = 73/107 (68%)
Frame = +3
Query: 207 SVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRC 386
+V++IIQG+ L +TDA+K +VE+KV KAV SH ++E+DV LS RGG G + +
Sbjct: 69 TVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKV 128
Query: 387 EVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHG 527
EVT++T R+GVVR E+ YA+IDLV I+ KL+KIKEK G
Sbjct: 129 EVTIYTLRNGVVRVEDAENNLYAAIDLVCDKIRAKLQKIKEKAISRG 175
[24][TOP]
>UniRef100_Q5MCR1 Chloroplast-specific ribosome-associated protein n=1 Tax=Volvox
carteri f. nagariensis RepID=Q5MCR1_VOLCA
Length = 232
Score = 105 bits (262), Expect = 2e-21
Identities = 50/109 (45%), Positives = 76/109 (69%)
Frame = +3
Query: 204 SSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSR 383
S+V++IIQG+ L +T+A+K++VE+KV KA+Q +H ++E+DV LS RGG G + +
Sbjct: 72 STVRIIIQGRKLPVTNAIKEYVEEKVAKAIQNFAHTLKEVDVTLSARGGDTGTHGKKEQK 131
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
+VT+FT R+GVVR E+ YA+IDLV I+ KL ++KEK G+
Sbjct: 132 VDVTIFTLRNGVVRVEDRESNLYAAIDLVCDKIRSKLTRVKEKAITKGK 180
[25][TOP]
>UniRef100_C1EFG3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EFG3_9CHLO
Length = 284
Score = 100 bits (250), Expect = 6e-20
Identities = 53/121 (43%), Positives = 87/121 (71%), Gaps = 3/121 (2%)
Frame = +3
Query: 204 SSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHS-HIVREIDVRLSTRGGGEFGR-GPRT 377
+S K+I+QG++L++TD+++++ E+K+ KAV H VRE+DVR S+RGG + G
Sbjct: 78 ASTKVIVQGRHLEITDSIREYAEEKINKAVAHFDQHDVREVDVRCSSRGGADKKTPGGAL 137
Query: 378 SRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKE-KVSDHGRHMKGFNRA 554
+ EVT++T R+G++R+EE+++ YASID VS ++RKLRK+KE K+S +H K +A
Sbjct: 138 QKTEVTVYT-RNGIIRSEEEADDLYASIDAVSDKLERKLRKVKEKKISKRPKHNKNAPKA 196
Query: 555 K 557
+
Sbjct: 197 Q 197
[26][TOP]
>UniRef100_B0CDL4 High light inducible protein n=1 Tax=Acaryochloris marina MBIC11017
RepID=B0CDL4_ACAM1
Length = 212
Score = 90.9 bits (224), Expect = 6e-17
Identities = 55/119 (46%), Positives = 74/119 (62%), Gaps = 3/119 (2%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTS--- 380
+KL+I GKN+++TDA++++V K+ KA + ++ EIDV LS R PR +
Sbjct: 1 MKLVIHGKNIEITDAIREYVHQKIEKAANHYQNLTTEIDVHLSV------ARNPRITTKQ 54
Query: 381 RCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRAK 557
EVTLF V+RAEE SE YASIDLV+ I R+LRK KEK G + KG NR+K
Sbjct: 55 TAEVTLFV-NGSVIRAEESSENLYASIDLVADKIARQLRKYKEKRQTKGPN-KGSNRSK 111
[27][TOP]
>UniRef100_C1N7A9 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N7A9_9CHLO
Length = 245
Score = 90.1 bits (222), Expect = 1e-16
Identities = 50/106 (47%), Positives = 72/106 (67%), Gaps = 1/106 (0%)
Frame = +3
Query: 198 PLSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHS-HIVREIDVRLSTRGGGEFGRGPR 374
P K+I+QG++L++T+A++ + E K+ KAV H VRE+DV S R E +G
Sbjct: 42 PAKGTKVIVQGRHLEITEAIRDYCEQKINKAVSHFDMHDVREVDVTCSARS--EKQQGGD 99
Query: 375 TSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEK 512
+VT++T R+GVVR+EE+++ YASID VS I+RKLRKIKEK
Sbjct: 100 LQMTQVTVYT-RNGVVRSEEEADNLYASIDAVSDKIERKLRKIKEK 144
[28][TOP]
>UniRef100_A0ZCI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Nodularia spumigena CCY9414 RepID=A0ZCI5_NODSP
Length = 213
Score = 89.0 bits (219), Expect = 2e-16
Identities = 52/122 (42%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTS--- 380
+KL+I GKN+++TDA++++V K+ KAV +I E+DV LS R PR +
Sbjct: 1 MKLVIHGKNIEITDAIREYVHQKIEKAVSHFQNITNEVDVHLSV------ARNPRITTKQ 54
Query: 381 RCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRAKV 560
EVT+F V+RAEE SE YASIDLV+ I R+LRK KE++ D + N+ V
Sbjct: 55 AAEVTIFA-NGSVIRAEESSENLYASIDLVADKIARQLRKYKERLQDQKTNAPPTNQVLV 113
Query: 561 RE 566
E
Sbjct: 114 PE 115
[29][TOP]
>UniRef100_B9YPU1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax='Nostoc
azollae' 0708 RepID=B9YPU1_ANAAZ
Length = 214
Score = 86.7 bits (213), Expect = 1e-15
Identities = 52/122 (42%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSR-- 383
+KL+I GKN+++TDA++++V K+ +AV I E++V LS R PR S
Sbjct: 1 MKLVIHGKNIEITDAIREYVHQKIERAVNHFQSITNEVNVHLSV------ARNPRISTKQ 54
Query: 384 -CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRAKV 560
EVT++ V+RAEE SE YASIDLV+ I R+LRK KE+ DH N A V
Sbjct: 55 AAEVTIYANG-SVIRAEESSENLYASIDLVADKIARQLRKYKERRQDHKTQPIPTNEAVV 113
Query: 561 RE 566
E
Sbjct: 114 AE 115
[30][TOP]
>UniRef100_B8HK26 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7425 RepID=B8HK26_CYAP4
Length = 209
Score = 86.3 bits (212), Expect = 1e-15
Identities = 51/111 (45%), Positives = 69/111 (62%), Gaps = 4/111 (3%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTS--- 380
+KL+I GKN+++TDA++ +V+ K+ KA ++ EIDV LS R PR +
Sbjct: 1 MKLVIHGKNIEITDAIRDYVQQKIEKAANHFQNLTTEIDVHLSV------ARNPRINPKQ 54
Query: 381 RCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSD-HGR 530
EVT++T V+RAEE SE YASIDLVS I R+LRK KE+ D H R
Sbjct: 55 TAEVTIYT-NGSVIRAEESSENLYASIDLVSDKIARQLRKFKERRQDKHSR 104
[31][TOP]
>UniRef100_Q8YSA5 Light-repressed protein n=1 Tax=Nostoc sp. PCC 7120
RepID=Q8YSA5_ANASP
Length = 213
Score = 85.5 bits (210), Expect = 3e-15
Identities = 48/107 (44%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTS--- 380
+KL+I GKN+++TDA++++V K+ KAV +I E+DV LS R PR +
Sbjct: 1 MKLVIHGKNIEITDAIREYVHQKIEKAVNHFQNITNEVDVHLSV------ARNPRINTRQ 54
Query: 381 RCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSD 521
EVT++ V+RAEE SE YASIDLV+ I R+LRK KE+ D
Sbjct: 55 AAEVTIYA-NGSVIRAEESSENLYASIDLVADKISRQLRKYKERKQD 100
[32][TOP]
>UniRef100_Q3M699 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Anabaena variabilis ATCC 29413 RepID=Q3M699_ANAVT
Length = 213
Score = 85.5 bits (210), Expect = 3e-15
Identities = 48/107 (44%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTS--- 380
+KL+I GKN+++TDA++++V K+ KAV +I E+DV LS R PR +
Sbjct: 1 MKLVIHGKNIEITDAIREYVHQKIEKAVNHFQNITNEVDVHLSV------ARNPRINTRQ 54
Query: 381 RCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSD 521
EVT++ V+RAEE SE YASIDLV+ I R+LRK KE+ D
Sbjct: 55 AAEVTIYA-NGSVIRAEESSENLYASIDLVADKISRQLRKYKERKQD 100
[33][TOP]
>UniRef100_B4VJW0 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Microcoleus chthonoplastes PCC 7420
RepID=B4VJW0_9CYAN
Length = 215
Score = 85.5 bits (210), Expect = 3e-15
Identities = 47/104 (45%), Positives = 69/104 (66%), Gaps = 3/104 (2%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTS--- 380
+KL+IQGKN+++TD+++++V K+ KAV ++ E+DV LS R PR +
Sbjct: 1 MKLVIQGKNIEITDSIREYVNQKIEKAVNHFQNMTTEVDVHLSV------ARNPRINTKQ 54
Query: 381 RCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEK 512
EVT++ + V+RA+E SE YASIDLV+ IQR+LRK KEK
Sbjct: 55 TAEVTIYANK-TVIRAQESSEDLYASIDLVADKIQRQLRKYKEK 97
[34][TOP]
>UniRef100_B5VV76 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Arthrospira maxima CS-328 RepID=B5VV76_SPIMA
Length = 212
Score = 84.7 bits (208), Expect = 4e-15
Identities = 48/104 (46%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTS--- 380
+KL+IQGKNL++TDA+ ++V+ K+ KAV + E+DV LS R PR +
Sbjct: 1 MKLVIQGKNLEITDAIHEYVQQKIAKAVSHFQQLTNEVDVHLSV------ARNPRINPRQ 54
Query: 381 RCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEK 512
EVT++ V+RA+E SE YASIDLV+ I R+LRK KEK
Sbjct: 55 TAEVTIYA-NGTVIRAQESSENLYASIDLVADKIARQLRKYKEK 97
[35][TOP]
>UniRef100_Q0ICJ8 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
CC9311 RepID=Q0ICJ8_SYNS3
Length = 191
Score = 84.3 bits (207), Expect = 6e-15
Identities = 48/108 (44%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSR-- 383
+KL+I G+NLD+T A++++ E K+ +A+ +V+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLDVTPALREYTETKLERAIHHFDDLVKEADVHLSV------ARNPRVPQQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHG 527
EVT+F V+RA+E SE YASIDLV+S + R+LR+ KE+ SDHG
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVASKLARQLRRFKERHSDHG 101
[36][TOP]
>UniRef100_A8YEZ8 LrtA protein n=1 Tax=Microcystis aeruginosa PCC 7806
RepID=A8YEZ8_MICAE
Length = 199
Score = 84.0 bits (206), Expect = 7e-15
Identities = 48/108 (44%), Positives = 68/108 (62%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+KL+IQG N+ +T+A+ +VE K+ KAV+ + I ++DV LS R P + E
Sbjct: 1 MKLLIQGNNIAVTEAIHDYVEQKLEKAVKHFNGITTKVDVHLSVEKNA---RIPDRHKAE 57
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRH 533
VT++ V+RA+E SE YASIDLVS I R+LRK KE++ DH H
Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKERLVDHRTH 104
[37][TOP]
>UniRef100_Q2JS19 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
JA-3-3Ab RepID=Q2JS19_SYNJA
Length = 191
Score = 83.6 bits (205), Expect = 1e-14
Identities = 48/107 (44%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Frame = +3
Query: 213 KLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTS---R 383
KL+IQGKN+++TDA++ +V++K+ +AV+ + I E+DV LS R PR S
Sbjct: 3 KLVIQGKNVEITDAIRSYVQEKIERAVKHFAQITSEVDVNLSV------ARNPRISANQS 56
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDH 524
EVT++ V+RAEE SE YASID V+ + RKLRK KE+ H
Sbjct: 57 AEVTVYA-NGTVIRAEESSENLYASIDRVADKLARKLRKYKERNGVH 102
[38][TOP]
>UniRef100_A0YIH4 Light-repressed protein n=1 Tax=Lyngbya sp. PCC 8106
RepID=A0YIH4_9CYAN
Length = 212
Score = 83.6 bits (205), Expect = 1e-14
Identities = 50/122 (40%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTS--- 380
+KL++QGKNL++T+A+ ++V K+ KAV + + E+DV LS R PR +
Sbjct: 1 MKLVVQGKNLEITEAIHEYVHQKITKAVSHYQQLTNEVDVHLS------IARNPRINPKQ 54
Query: 381 RCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRAKV 560
EVT++ V+RA+E SE YASIDLV+ I R+LRK K+K G+H+ A+V
Sbjct: 55 TAEVTIYA-NGTVIRAQESSENLYASIDLVADKIARQLRKFKDK--RQGKHLHPPKLAEV 111
Query: 561 RE 566
E
Sbjct: 112 VE 113
[39][TOP]
>UniRef100_Q8DKM6 LrtA protein n=1 Tax=Thermosynechococcus elongatus BP-1
RepID=Q8DKM6_THEEB
Length = 209
Score = 83.2 bits (204), Expect = 1e-14
Identities = 45/107 (42%), Positives = 66/107 (61%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
++L+I GKN+D+TD ++ ++ K+ +A +++ E+DV LS P+ + E
Sbjct: 1 MRLVIHGKNIDITDGIRSYLNQKIERATSHFQNVINEVDVHLSVARNRS--TAPKQT-AE 57
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
VT+F V+RAEE SE YASIDLV+ I RKLRK+KEK D R
Sbjct: 58 VTVFVNG-SVIRAEESSENLYASIDLVADKIARKLRKLKEKRQDKSR 103
[40][TOP]
>UniRef100_Q2JIS4 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
JA-2-3B'a(2-13) RepID=Q2JIS4_SYNJB
Length = 190
Score = 83.2 bits (204), Expect = 1e-14
Identities = 48/107 (44%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Frame = +3
Query: 213 KLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTS---R 383
KL+IQGKN+++TDA++ +V++K+ +AV + I E+DV LS R PR S
Sbjct: 3 KLVIQGKNVEITDAIRSYVQEKIERAVSHFAQITSEVDVNLSV------ARNPRISASQS 56
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDH 524
EVT++ V+RAEE SE YASID V+ + RKLRK KE+ H
Sbjct: 57 AEVTVYA-NGTVIRAEESSENLYASIDRVADKLARKLRKYKERNGIH 102
[41][TOP]
>UniRef100_B1WZE1 Light repressed protein n=1 Tax=Cyanothece sp. ATCC 51142
RepID=B1WZE1_CYAA5
Length = 201
Score = 82.4 bits (202), Expect = 2e-14
Identities = 45/106 (42%), Positives = 69/106 (65%)
Frame = +3
Query: 207 SVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRC 386
S+KL+IQG N+D+T+++ +V K+ KAV+ + + ++DV LS + R +
Sbjct: 2 SMKLLIQGNNIDVTESINDYVTQKLEKAVKHYQTLTTKVDVHLSV---AKNARITNKHKA 58
Query: 387 EVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDH 524
EVT++ V+RA+E SE YASIDLVS I R+LRK KEK+++H
Sbjct: 59 EVTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKEKINNH 103
[42][TOP]
>UniRef100_B4WNT9 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Synechococcus sp. PCC 7335 RepID=B4WNT9_9SYNE
Length = 224
Score = 82.4 bits (202), Expect = 2e-14
Identities = 46/104 (44%), Positives = 68/104 (65%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+KL+IQGKN+++TDA++ HV K+ KA ++ ++DV LS + P+ + E
Sbjct: 1 MKLVIQGKNIEITDAIRSHVHQKIEKATAHFQTLINKVDVCLSVQNNPRI--APKQT-AE 57
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSD 521
VT+F + VVRAEE SE+ YASID+V+ + R+LRK KEK D
Sbjct: 58 VTVFL-NNVVVRAEESSESLYASIDMVTDKLTRQLRKYKEKRRD 100
[43][TOP]
>UniRef100_Q4CAE1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Crocosphaera watsonii WH 8501 RepID=Q4CAE1_CROWT
Length = 199
Score = 82.0 bits (201), Expect = 3e-14
Identities = 46/105 (43%), Positives = 68/105 (64%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+KL+IQG N+D+T+++ +V+ K+ KAV+ + ++DV LS + R + E
Sbjct: 1 MKLLIQGNNIDVTESINDYVKQKLEKAVKHYQTFTTKVDVHLSV---AKNARITDKHKAE 57
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDH 524
VT++ V+RA+E SE YASIDLVS I R+LRK KEKVS+H
Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVSDKISRQLRKYKEKVSNH 101
[44][TOP]
>UniRef100_A3YVD7 Light repressed protein A-like protein n=1 Tax=Synechococcus sp. WH
5701 RepID=A3YVD7_9SYNE
Length = 195
Score = 82.0 bits (201), Expect = 3e-14
Identities = 44/107 (41%), Positives = 71/107 (66%), Gaps = 2/107 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSR-- 383
+KL+I G+NLD+T A++ + E K+G+A+ + +V+E DV LS R PR ++
Sbjct: 1 MKLLIHGRNLDVTPAIRDYTEAKLGRAINHYEGLVKEADVHLSV------ARNPRVAQQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDH 524
EVT+F V+RA+E SE YASID+V+ + R+LR+ K+++S+H
Sbjct: 55 AEVTVFA-NGVVIRAQERSENLYASIDMVAGKLSRQLRRYKDRLSNH 100
[45][TOP]
>UniRef100_C7QW97 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Cyanothece RepID=C7QW97_CYAP0
Length = 205
Score = 81.6 bits (200), Expect = 4e-14
Identities = 51/125 (40%), Positives = 76/125 (60%)
Frame = +3
Query: 192 DGPLSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGP 371
D + S+KL+IQG N+D+T+++ +V++K+ KAV+ I ++DV LS R
Sbjct: 2 DNGVLSMKLLIQGNNIDVTESIHDYVQEKLEKAVKHFQSITTKVDVHLSV---ARNARIT 58
Query: 372 RTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNR 551
+ EVT++ V+RA+E SE+ YASIDLVS I R+LRK KEK++ + K N
Sbjct: 59 NKHKAEVTVYA-NGTVIRAQEGSESLYASIDLVSDKIARQLRKYKEKLN----NKKAPNP 113
Query: 552 AKVRE 566
KV E
Sbjct: 114 VKVGE 118
[46][TOP]
>UniRef100_A3ZA02 Light repressed protein A-like protein n=1 Tax=Synechococcus sp.
RS9917 RepID=A3ZA02_9SYNE
Length = 195
Score = 81.6 bits (200), Expect = 4e-14
Identities = 50/113 (44%), Positives = 71/113 (62%), Gaps = 2/113 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSR-- 383
+KL+I G+NL+LT A++ + + K+ +AVQ +V+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLELTPALRDYTQSKLERAVQHFDDMVKEADVHLSV------ARNPRVPQQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKG 542
EVT+F V+RA+E SE YASIDLV+S + R+LR+ KE+ SDH H G
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVASKLCRQLRRFKERHSDH-HHSNG 105
[47][TOP]
>UniRef100_B0JSS1 Light repressed protein A homolog n=1 Tax=Microcystis aeruginosa
NIES-843 RepID=B0JSS1_MICAN
Length = 199
Score = 81.3 bits (199), Expect = 5e-14
Identities = 47/105 (44%), Positives = 66/105 (62%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+KL+IQG N+ +T+ + +VE K+ KAV+ + I ++DV LS R P R E
Sbjct: 1 MKLLIQGNNIAVTEPIHDYVEQKLEKAVKHFNGITTKVDVHLSVEKNA---RIPDRHRAE 57
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDH 524
VT++ V+RA+E SE YASIDLVS I R+LRK KE++ DH
Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKERLVDH 101
[48][TOP]
>UniRef100_Q10ZL6 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Trichodesmium erythraeum IMS101 RepID=Q10ZL6_TRIEI
Length = 215
Score = 80.9 bits (198), Expect = 6e-14
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTS--- 380
+KL+IQGKN+++TD++ ++V K+ KAV + E+DV LS R PR +
Sbjct: 1 MKLVIQGKNIEITDSIHEYVNQKIEKAVNHFQQLTTEVDVHLSV------ARNPRINPKQ 54
Query: 381 RCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEK 512
EVT++ V+RA+E SE YASIDLV+ I R+LRK KEK
Sbjct: 55 TAEVTIYA-NGTVIRAQESSENLYASIDLVADKIARQLRKYKEK 97
[49][TOP]
>UniRef100_A5GJ89 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 7803
RepID=A5GJ89_SYNPW
Length = 195
Score = 80.9 bits (198), Expect = 6e-14
Identities = 46/107 (42%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSR-- 383
+KL+I G+NLD+T A++ + E K+ +A+ +V+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLDVTPALRDYTETKLDRAIHNFGDLVKEADVHLSV------ARNPRVPQQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDH 524
EVT+F V+RA+E SE YASIDLV+S + R+LR+ K++ SDH
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVASKLARQLRRFKDRHSDH 100
[50][TOP]
>UniRef100_Q05SE1 Putative uncharacterized protein n=1 Tax=Synechococcus sp. RS9916
RepID=Q05SE1_9SYNE
Length = 195
Score = 80.9 bits (198), Expect = 6e-14
Identities = 47/107 (43%), Positives = 70/107 (65%), Gaps = 2/107 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSR-- 383
+KL+I G+NL++T A++++ E K+ +AVQ + +V E DV LS R PR +
Sbjct: 1 MKLLIHGRNLEVTAALREYTESKLERAVQHYDEMVVEADVHLSV------ARNPRVPQQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDH 524
EVT+F V+RA+E SE YASIDLV++ + R+LR+ KE+ SDH
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVANKLSRQLRRYKERHSDH 100
[51][TOP]
>UniRef100_A4CWK2 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 7805
RepID=A4CWK2_SYNPV
Length = 195
Score = 80.5 bits (197), Expect = 8e-14
Identities = 46/107 (42%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSR-- 383
+KL+I G+NLD+T A++ + E K+ +A+ +V+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLDVTPALRDYTETKLDRAIHNFGDLVKEADVHLSV------ARNPRVPQQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDH 524
EVT+F V+RA+E SE YASIDLV+S + R+LR+ K++ SDH
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVASKLARQLRRYKDRHSDH 100
[52][TOP]
>UniRef100_B2IVM1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Nostoc
punctiforme PCC 73102 RepID=B2IVM1_NOSP7
Length = 214
Score = 80.1 bits (196), Expect = 1e-13
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTS--- 380
+KL+I KN+++TDA++++V K+ KA I E+DV LS R PR +
Sbjct: 1 MKLVIHSKNIEITDAIREYVHQKIEKAASHFQSITNEVDVHLSV------ARNPRINTRQ 54
Query: 381 RCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSD 521
EVT++ V+RAEE SE YASIDLV+ I R+LRK KE+ D
Sbjct: 55 AAEVTIYA-NGSVIRAEESSENLYASIDLVADKIARQLRKYKERRQD 100
[53][TOP]
>UniRef100_A8G3B2 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus str.
MIT 9215 RepID=A8G3B2_PROM2
Length = 194
Score = 80.1 bits (196), Expect = 1e-13
Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 2/103 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTS--R 383
+K++I GKNL+LT A+K++ E K+ KA + IV+E D+ LS + PR S
Sbjct: 1 MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEK 512
EVT+F V+RAEE +E Y+SIDLVS+ + RKLRK KE+
Sbjct: 55 AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKER 96
[54][TOP]
>UniRef100_A3PBB8 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9301 RepID=A3PBB8_PROM0
Length = 194
Score = 80.1 bits (196), Expect = 1e-13
Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 2/103 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTS--R 383
+K++I GKNL+LT A+K++ E K+ KA + IV+E D+ LS + PR S
Sbjct: 1 MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEK 512
EVT+F V+RAEE +E Y+SIDLVS+ + RKLRK KE+
Sbjct: 55 AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKER 96
[55][TOP]
>UniRef100_A2BV60 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9515 RepID=A2BV60_PROM5
Length = 194
Score = 80.1 bits (196), Expect = 1e-13
Identities = 49/115 (42%), Positives = 69/115 (60%), Gaps = 2/115 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTS--R 383
+K++I GKN++LT A+K++ E K+ KA + IV+E D+ LS + PR S
Sbjct: 1 MKILIHGKNIELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRLSYQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFN 548
EVT+F ++RAEE +E Y+SIDLVS+ + RKLRK KE RH K N
Sbjct: 55 AEVTIFASGT-IIRAEEKTENLYSSIDLVSNKLCRKLRKYKE------RHYKNLN 102
[56][TOP]
>UniRef100_A2BPM8 Light repressed protein A n=1 Tax=Prochlorococcus marinus str.
AS9601 RepID=A2BPM8_PROMS
Length = 194
Score = 80.1 bits (196), Expect = 1e-13
Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 2/103 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTS--R 383
+K++I GKNL+LT A+K++ E K+ KA + IV+E D+ LS + PR S
Sbjct: 1 MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEK 512
EVT+F V+RAEE +E Y+SIDLVS+ + RKLRK KE+
Sbjct: 55 AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKER 96
[57][TOP]
>UniRef100_Q1PKX8 Light repressed protein A-like protein n=1 Tax=uncultured
Prochlorococcus marinus clone ASNC2259
RepID=Q1PKX8_PROMA
Length = 194
Score = 80.1 bits (196), Expect = 1e-13
Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 2/103 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTS--R 383
+K++I GKNL+LT A+K++ E K+ KA + IV+E D+ LS + PR S
Sbjct: 1 MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEK 512
EVT+F V+RAEE +E Y+SIDLVS+ + RKLRK KE+
Sbjct: 55 AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKER 96
[58][TOP]
>UniRef100_Q1PJW9 Light repressed protein A n=1 Tax=uncultured Prochlorococcus
marinus clone HF10-88F10 RepID=Q1PJW9_PROMA
Length = 194
Score = 80.1 bits (196), Expect = 1e-13
Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 2/103 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTS--R 383
+K++I GKNL+LT A+K++ E K+ KA + IV+E D+ LS + PR S
Sbjct: 1 MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEK 512
EVT+F V+RAEE +E Y+SIDLVS+ + RKLRK KE+
Sbjct: 55 AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKER 96
[59][TOP]
>UniRef100_B9P0E9 Light repressed protein A n=1 Tax=Prochlorococcus marinus str. MIT
9202 RepID=B9P0E9_PROMA
Length = 194
Score = 80.1 bits (196), Expect = 1e-13
Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 2/103 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTS--R 383
+K++I GKNL+LT A+K++ E K+ KA + IV+E D+ LS + PR S
Sbjct: 1 MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEK 512
EVT+F V+RAEE +E Y+SIDLVS+ + RKLRK KE+
Sbjct: 55 AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKER 96
[60][TOP]
>UniRef100_A3IRI7 Light repressed protein n=1 Tax=Cyanothece sp. CCY0110
RepID=A3IRI7_9CHRO
Length = 199
Score = 79.3 bits (194), Expect = 2e-13
Identities = 44/105 (41%), Positives = 67/105 (63%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+KL+IQG N+D+T+++ +V K+ KAV+ + ++DV LS + R + E
Sbjct: 1 MKLLIQGNNIDVTESINDYVTQKLEKAVKHYQTFTTKVDVHLSV---AKNARITDKHKAE 57
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDH 524
VT++ V+RA+E SE YASIDLVS I R+LRK KEK+++H
Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKEKINNH 101
[61][TOP]
>UniRef100_Q7V8W0 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus
str. MIT 9313 RepID=Q7V8W0_PROMM
Length = 195
Score = 79.0 bits (193), Expect = 2e-13
Identities = 46/107 (42%), Positives = 69/107 (64%), Gaps = 2/107 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSR-- 383
+KL+I G+NL+LT A++++ + K+ +A+Q +V+E DV LS R P +
Sbjct: 1 MKLLIHGRNLELTPALREYTQSKLERAIQHFEDMVKEADVHLSV------ARNPSVPQQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDH 524
EVT+F V+RA+E SE YASIDLV+S + R+LR+ KE+ SDH
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH 100
[62][TOP]
>UniRef100_A2CBL6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9303 RepID=A2CBL6_PROM3
Length = 195
Score = 79.0 bits (193), Expect = 2e-13
Identities = 46/107 (42%), Positives = 69/107 (64%), Gaps = 2/107 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSR-- 383
+KL+I G+NL+LT A++++ + K+ +A+Q +V+E DV LS R P +
Sbjct: 1 MKLLIHGRNLELTPALREYTQSKLERAIQHFEDMVKEADVHLSV------ARNPSVPQQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDH 524
EVT+F V+RA+E SE YASIDLV+S + R+LR+ KE+ SDH
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH 100
[63][TOP]
>UniRef100_P74518 Light repressed protein A homolog n=1 Tax=Synechocystis sp. PCC
6803 RepID=LRTA_SYNY3
Length = 191
Score = 78.2 bits (191), Expect = 4e-13
Identities = 45/108 (41%), Positives = 68/108 (62%), Gaps = 2/108 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+KL+IQG N+ +T+A+ +VE+KV +AV+ ++ ++DV LS R + E
Sbjct: 1 MKLLIQGNNITVTEAIHDYVEEKVERAVKHFQNLTTKVDVHLSVARNA---RITNKHKAE 57
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSD--HG 527
VT++ V+RA+E SE YASIDLV+ I R+LRK KE++ D HG
Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVADKIARQLRKYKERIQDKQHG 104
[64][TOP]
>UniRef100_Q7V2R9 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus
subsp. pastoris str. CCMP1986 RepID=Q7V2R9_PROMP
Length = 194
Score = 77.8 bits (190), Expect = 5e-13
Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTS--R 383
+K++I GKNL+LT +K++ E K+ KA + IV+E D+ LS + PR S
Sbjct: 1 MKILIHGKNLELTGPLKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEK 512
EVT+F ++RAEE +E Y+SIDLVS+ + RKLRK KE+
Sbjct: 55 AEVTIFANGT-IIRAEEKTENLYSSIDLVSNKLCRKLRKYKER 96
[65][TOP]
>UniRef100_Q46H11 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Prochlorococcus marinus str. NATL2A
RepID=Q46H11_PROMT
Length = 194
Score = 77.8 bits (190), Expect = 5e-13
Identities = 45/110 (40%), Positives = 67/110 (60%), Gaps = 2/110 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSR-- 383
+KL+I G+NL+LT +++ + + K+ KA +V+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLELTQSLRDYTKTKIDKATHNFQEMVQEADVHLSV------ARNPRVPQQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRH 533
EVT+F V+RA+E SE YASIDLV++ + R+LRK KE+ + H H
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVH 103
[66][TOP]
>UniRef100_Q31KN7 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Synechococcus elongatus PCC 7942 RepID=Q31KN7_SYNE7
Length = 207
Score = 77.8 bits (190), Expect = 5e-13
Identities = 44/104 (42%), Positives = 64/104 (61%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+KL++QG N+D+T A+ +V+ K+ KAV + + EIDV LS + + E
Sbjct: 1 MKLVVQGTNIDVTAAIHDYVQQKLDKAVSHYQSFLTEIDVHLSV---AKHAKSNPRQTAE 57
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSD 521
VT++ V+RAEE +E YASIDLVS I R+L+K KEK+ D
Sbjct: 58 VTIYA-NGTVIRAEECNENLYASIDLVSDKITRQLKKYKEKLRD 100
[67][TOP]
>UniRef100_B4AWR2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7822 RepID=B4AWR2_9CHRO
Length = 199
Score = 77.8 bits (190), Expect = 5e-13
Identities = 44/101 (43%), Positives = 65/101 (64%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+KL+IQG N+ +T+A+ +V++K+ KAV+ I ++DV LS + GR + E
Sbjct: 1 MKLLIQGNNITVTEAIHDYVQEKLEKAVKHFQAITTKVDVHLSV---AKNGRVQNKHKAE 57
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEK 512
VT++ V+RA+E SE YASIDLVS I R+LRK KE+
Sbjct: 58 VTVYA-NGAVIRAQEGSENLYASIDLVSDKIARQLRKYKER 97
[68][TOP]
>UniRef100_A2C0K6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. NATL1A RepID=A2C0K6_PROM1
Length = 194
Score = 77.4 bits (189), Expect = 7e-13
Identities = 45/110 (40%), Positives = 67/110 (60%), Gaps = 2/110 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSR-- 383
+KL+I G+NL+LT +++ + + K+ KA +V+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLELTPSLRDYTKTKIDKATHNFQEMVQEADVHLSV------ARNPRVPQQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRH 533
EVT+F V+RA+E SE YASIDLV++ + R+LRK KE+ + H H
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVH 103
[69][TOP]
>UniRef100_Q7VDH9 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus
RepID=Q7VDH9_PROMA
Length = 195
Score = 77.0 bits (188), Expect = 9e-13
Identities = 47/119 (39%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSR-- 383
+K++I G+NL+LT A++++ + K+ KA+ +V+E DV LS + PR +
Sbjct: 1 MKVLIHGRNLELTPALREYTKSKLEKAIHHFGDMVKEADVHLSV------AKNPRVPQQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRAKV 560
EVT+F V+RA+E S+ YASIDLVS+ + R+LR+ KE+ SDH H +RA +
Sbjct: 55 AEVTVFANGT-VIRAQERSQNLYASIDLVSNKLCRQLRRYKERHSDH--HHSPGHRASI 110
[70][TOP]
>UniRef100_Q31CD8 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Prochlorococcus marinus str. MIT 9312
RepID=Q31CD8_PROM9
Length = 194
Score = 76.6 bits (187), Expect = 1e-12
Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTS--R 383
+K++I GKNL+LT A+K++ + K+ KA + IV+E D+ LS + P S
Sbjct: 1 MKILIHGKNLELTGALKEYTQAKIEKATHHYKDIVKEADIHLSIE------KNPSVSLQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEK 512
EVT+F V+RAEE +E Y+SIDLVS+ + RKLRK KE+
Sbjct: 55 AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKER 96
[71][TOP]
>UniRef100_Q5N179 Light repressed protein A homolog n=1 Tax=Synechococcus elongatus
PCC 6301 RepID=Q5N179_SYNP6
Length = 207
Score = 76.3 bits (186), Expect = 2e-12
Identities = 43/104 (41%), Positives = 64/104 (61%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+KL++QG N+D+T A+ +V+ K+ KAV + + EIDV LS + + E
Sbjct: 1 MKLVVQGTNIDVTAAIHDYVQQKLDKAVSHYQSFLTEIDVHLSV---AKHAKSNPRQTAE 57
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSD 521
VT++ V+RAEE +E YASIDLVS I R+L+K KE++ D
Sbjct: 58 VTIYA-NGTVIRAEECNENLYASIDLVSDKITRQLKKYKEELRD 100
[72][TOP]
>UniRef100_B5IMZ9 Light repressed protein n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5IMZ9_9CHRO
Length = 195
Score = 76.3 bits (186), Expect = 2e-12
Identities = 46/117 (39%), Positives = 72/117 (61%), Gaps = 2/117 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSR-- 383
+KL+I G+NL++T A++++ E K+ +A+ +V+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLEVTPAIREYTETKLTRAITHFEGMVKEADVHLSV------ARNPRVPQQI 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRA 554
EVT+F V+RA+E S+ YASIDLV+S + R+L + KE+V H RH +R+
Sbjct: 55 AEVTMFANGT-VIRAQEHSDNLYASIDLVASKLTRQLNRYKERV--HERHQGPVHRS 108
[73][TOP]
>UniRef100_Q7U8F3 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 8102
RepID=Q7U8F3_SYNPX
Length = 195
Score = 75.9 bits (185), Expect = 2e-12
Identities = 45/107 (42%), Positives = 66/107 (61%), Gaps = 2/107 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSR-- 383
+KL+I G+NL++T A++ + + K+ +A + VRE DV LS R PR +
Sbjct: 1 MKLLIHGRNLEITPALRDYTQTKLERATHHFGNAVREADVHLSV------ARNPRVPQQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDH 524
EVT+F V+RA+E SE YASIDL +S + R+LR+ KE+ SDH
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLAASKLARQLRRWKERHSDH 100
[74][TOP]
>UniRef100_A5GUZ2 Light repressed protein A homolog n=1 Tax=Synechococcus sp. RCC307
RepID=A5GUZ2_SYNR3
Length = 187
Score = 75.9 bits (185), Expect = 2e-12
Identities = 44/110 (40%), Positives = 68/110 (61%), Gaps = 2/110 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSR-- 383
+KL+I G+NL++T A++ + E K+ +AV + +V+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLEVTPALRDYTETKLSRAVSHFNGMVQEADVHLSV------ARNPRVPQQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRH 533
EVTLF V+RA+E S+ YASIDLV+ + R+L++ K++ HG H
Sbjct: 55 AEVTLFASGT-VIRAQERSQNLYASIDLVAGKLARQLQRHKDRRQGHGHH 103
[75][TOP]
>UniRef100_A9BE19 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9211 RepID=A9BE19_PROM4
Length = 197
Score = 75.1 bits (183), Expect = 3e-12
Identities = 44/107 (41%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSR-- 383
+KL+I G+NL+LT +++++ + K+ KA+ IV+E DV LS + P +
Sbjct: 1 MKLLIHGRNLELTPSLREYTQSKLEKAIHHFDGIVQEADVHLS------IAKNPSVPQQI 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDH 524
EVT+F V+RA+E S+ YASIDLV++ + R+LRK KE+ SDH
Sbjct: 55 AEVTVFANGT-VIRAQERSQNLYASIDLVATKLCRQLRKYKERHSDH 100
[76][TOP]
>UniRef100_B7KLI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7424 RepID=B7KLI5_CYAP7
Length = 199
Score = 74.7 bits (182), Expect = 4e-12
Identities = 43/108 (39%), Positives = 65/108 (60%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+KL+IQG N+ +T+A+ +V+ K+ KAV+ + ++DV LS + R + E
Sbjct: 1 MKLLIQGNNITVTEAIHDYVQQKLEKAVKHFQTLTTKVDVHLSV---AKNARIQNKHKAE 57
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRH 533
VT++ V+RA+E SE YASIDLVS I R+LRK KE+ + H
Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKERKLEQNAH 104
[77][TOP]
>UniRef100_Q3AI28 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Synechococcus sp. CC9605 RepID=Q3AI28_SYNSC
Length = 195
Score = 73.6 bits (179), Expect = 1e-11
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSR-- 383
+KL+I G+NL++T A++ + + K+ +A VRE DV LS R PR +
Sbjct: 1 MKLLIHGRNLEITPALRDYTQTKLERATSHFGDAVREADVHLSV------ARNPRVPQQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDH 524
EVT+F V+RA+E SE YASIDL + + R+LR+ KE+ SDH
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLAAGKLARQLRRWKERHSDH 100
[78][TOP]
>UniRef100_Q00W70 Chloroplast-specific ribosomal protein (ISS) n=1 Tax=Ostreococcus
tauri RepID=Q00W70_OSTTA
Length = 184
Score = 73.6 bits (179), Expect = 1e-11
Identities = 43/112 (38%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Frame = +3
Query: 204 SSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQK-HSHIVREIDVRLSTRGGGEFGRGPRTS 380
+ VK+++QG +L++T A+ ++V K+G+A S +RE+DVR S RGG E +G
Sbjct: 48 TDVKMLVQGLHLEITPAIDEYVRSKIGRACSHVDSRDIREVDVRCSARGG-EGSKGGVEH 106
Query: 381 RCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHG-RH 533
+ EVT+ R + A+ E YA+ID + I+ R +RK KEK G RH
Sbjct: 107 KTEVTVLMTRGPTLHADGVGENLYATIDQCADIVTRSIRKHKEKHGGKGARH 158
[79][TOP]
>UniRef100_Q3AZ51 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Synechococcus sp. CC9902 RepID=Q3AZ51_SYNS9
Length = 195
Score = 72.4 bits (176), Expect = 2e-11
Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSR-- 383
+K++I G+NL++T A++++ K+ +A +RE DV LS R PR +
Sbjct: 1 MKVLIHGRNLEITPALREYTNTKLERATSHFGDAIREADVHLSV------ARNPRVPQQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDH 524
EVT+F V+RA+E SE YASIDLV + R+LRK KE+ +DH
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVVGKLARQLRKWKERHADH 100
[80][TOP]
>UniRef100_Q063T8 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Synechococcus sp. BL107 RepID=Q063T8_9SYNE
Length = 195
Score = 72.4 bits (176), Expect = 2e-11
Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSR-- 383
+K++I G+NL++T A++++ K+ +A +RE DV LS R PR +
Sbjct: 1 MKVLIHGRNLEITPALREYTNTKLERATSHFGDAIREADVHLSV------ARNPRVPQQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDH 524
EVT+F V+RA+E SE YASIDLV + R+LRK KE+ +DH
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVVGKLARQLRKWKERHADH 100
[81][TOP]
>UniRef100_D0CH01 Sigma 54 modulation protein n=1 Tax=Synechococcus sp. WH 8109
RepID=D0CH01_9SYNE
Length = 195
Score = 72.4 bits (176), Expect = 2e-11
Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSR-- 383
+KL+I G+NL++T +++ + + K+ +A VRE DV LS R PR +
Sbjct: 1 MKLLIHGRNLEITPSLRDYTQTKLERATSHFGDAVREADVHLSV------ARNPRVPQQT 54
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDH 524
EVT+F V+RA+E SE YASIDL + + R+LR+ KE+ SDH
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLAAGKLARQLRRWKERHSDH 100
[82][TOP]
>UniRef100_A4SAX9 Plastid-specific ribosomal protein 1 n=1 Tax=Ostreococcus
lucimarinus CCE9901 RepID=A4SAX9_OSTLU
Length = 132
Score = 72.0 bits (175), Expect = 3e-11
Identities = 44/111 (39%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Frame = +3
Query: 216 LIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHI----VREIDVRLSTRGGGEFGRGPRTSR 383
+++QG +L++T A+ ++ K+GKA SH+ +RE+DVR S RGG E RG +
Sbjct: 1 MLVQGLHLEITPAIDEYCRAKIGKAC---SHVDPREIREVDVRCSARGG-EDSRGGHEHK 56
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHG-RH 533
EVT+ R + A+ E YA+ID + I+ R +RK KEK S G RH
Sbjct: 57 TEVTVLMTRGTTLHADGTGENLYATIDSCADIVTRAIRKHKEKHSGKGSRH 107
[83][TOP]
>UniRef100_P47908 Light repressed protein A n=1 Tax=Synechococcus sp. PCC 7002
RepID=LRTA_SYNP2
Length = 193
Score = 70.9 bits (172), Expect = 6e-11
Identities = 42/101 (41%), Positives = 60/101 (59%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+KL+IQG N+ +T+++ +VE K+ KA + ++DV LS R + E
Sbjct: 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANNA---RITDKHKAE 57
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEK 512
VT++ V+RA+E SE YASIDLVS I R+LRK KEK
Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKEK 97
[84][TOP]
>UniRef100_A9KS11 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Clostridium phytofermentans ISDg RepID=A9KS11_CLOPH
Length = 178
Score = 68.6 bits (166), Expect = 3e-10
Identities = 42/113 (37%), Positives = 67/113 (59%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
++ II GKN+D+T+ +K + +K+GK ++K+ + EI V LS + + E
Sbjct: 1 MRYIISGKNIDVTEGLKSAIYEKIGK-LEKYFNPEAEIHVTLSVEKDRQ--------KIE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFN 548
VT+ K + +VRAE+ S YASIDLV +I+R+L+K K K+ D + FN
Sbjct: 52 VTIPMKGN-IVRAEQVSNDMYASIDLVEEVIERQLKKYKSKLKDMNQSAANFN 103
[85][TOP]
>UniRef100_B1SBZ3 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius
subsp. infantarius ATCC BAA-102 RepID=B1SBZ3_9STRE
Length = 182
Score = 67.4 bits (163), Expect = 7e-10
Identities = 37/107 (34%), Positives = 70/107 (65%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K ++G+N+++TDA++ +VE K+GK ++K+ + +E+D R++ + E +T++ E
Sbjct: 2 IKYSVRGENIEVTDAIRNYVESKLGK-IEKYFNAEQELDARVNLKVYRE-----KTAKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
VT+ +RAE+ S+ Y SIDLV+ I+R++RK K K++ R
Sbjct: 56 VTILVNSI-TLRAEDVSQDMYGSIDLVTDKIERQIRKNKTKIAKKHR 101
[86][TOP]
>UniRef100_B0NJJ3 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC
35704 RepID=B0NJJ3_EUBSP
Length = 179
Score = 67.4 bits (163), Expect = 7e-10
Identities = 44/116 (37%), Positives = 68/116 (58%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K II GKN+D+T +K+ VE+K+GK ++++ EI V LS + + E
Sbjct: 1 MKFIIIGKNIDVTPGLKEAVENKLGK-LERYFTPDTEIHVTLSVQR--------ERQKIE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRAK 557
VT+ K G++R+E++S Y SIDLV +I+R+LRK K K+ RH +G K
Sbjct: 52 VTIPVKG-GIIRSEQESSDMYVSIDLVEEVIERQLRKYKNKLI--ARHQEGSGNFK 104
[87][TOP]
>UniRef100_C0PND1 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C0PND1_MAIZE
Length = 325
Score = 65.9 bits (159), Expect = 2e-09
Identities = 42/114 (36%), Positives = 64/114 (56%)
Frame = -3
Query: 530 ATVIRHFFLDLPQLSLNDGRHQIYTCIGSFRILLSPHDAMPLGKQSHLTSTSSGSSPKLS 351
A +R LDL +L+L+DG ++ +G +LL DAM LG++ L + G+ +L+
Sbjct: 140 AAHLRLLLLDLAELALDDGGGEVDAGVGGLGVLLGAQDAMALGEEGDLAARRLGAPAELA 199
Query: 350 STSSRKPDINLSDYVAVLLNGFPHLVLHVLLDSVGEVEILALDDEFDGGEWTVP 189
+ + + L D VAVL + HLVL VLL+ + ++ I AL DE E TVP
Sbjct: 200 AARG-EAHVYLPDQVAVLGHRPTHLVLDVLLELLAQLRIPALHDEAHRRERTVP 252
[88][TOP]
>UniRef100_C0BAM2 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC
27758 RepID=C0BAM2_9FIRM
Length = 189
Score = 65.1 bits (157), Expect = 4e-09
Identities = 42/113 (37%), Positives = 65/113 (57%)
Frame = +3
Query: 177 VRNSWDGPLSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGE 356
+RN LS + II G+N+D+T ++Q VE K+GK ++K+ +I V LS
Sbjct: 1 MRNMRKKELSCMNFIISGRNIDITPGLRQAVEQKLGK-LEKYFTPETDIIVTLSVE---- 55
Query: 357 FGRGPRTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKV 515
+ EVT+ K + ++R+E++S Y SIDLV II+R+LRK K K+
Sbjct: 56 ----KERQKIEVTIPVKGN-IIRSEQESSDMYVSIDLVEEIIERQLRKYKTKL 103
[89][TOP]
>UniRef100_C9L411 Ribosomal subunit interface protein n=1 Tax=Blautia hansenii DSM
20583 RepID=C9L411_RUMHA
Length = 176
Score = 64.7 bits (156), Expect = 5e-09
Identities = 41/104 (39%), Positives = 61/104 (58%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K II GKN+++T ++ VEDK+GK ++K+ EI V LS + E
Sbjct: 1 MKFIISGKNIEVTQGLRSAVEDKLGK-LEKYFTSDTEIIVTLSVE--------KERQKIE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSD 521
VT+ K + ++R+E+ S Y SIDLV II+R+LRK K K+ D
Sbjct: 52 VTIPVKGN-IIRSEQVSSDMYVSIDLVEEIIERQLRKYKNKIID 94
[90][TOP]
>UniRef100_B0P2P9 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1
RepID=B0P2P9_9CLOT
Length = 179
Score = 64.7 bits (156), Expect = 5e-09
Identities = 37/105 (35%), Positives = 66/105 (62%)
Frame = +3
Query: 201 LSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTS 380
+ ++K II GKN+++T+ +K +E+K+G+ + K+ ++V LS + G +
Sbjct: 1 MGAMKFIISGKNIEVTEGIKAAIEEKLGR-LDKYLVDDTIVNVTLSVQKGRQ-------- 51
Query: 381 RCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKV 515
+ EVT+ K H ++RAEE SE Y SIDLV +I+R++R+ K ++
Sbjct: 52 KIEVTIPMKGH-IIRAEEGSEDMYVSIDLVVDVIERQIRRYKTRL 95
[91][TOP]
>UniRef100_B0G387 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC
27755 RepID=B0G387_9FIRM
Length = 177
Score = 64.7 bits (156), Expect = 5e-09
Identities = 41/114 (35%), Positives = 66/114 (57%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K II GKN+D+T +K VE K+GK +Q++ EI V LS + + E
Sbjct: 1 MKFIIIGKNIDVTPGLKDAVESKLGK-LQRYFTPDTEIHVTLSVQ--------KEHQKIE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNR 551
VT+ K + ++R+E++S+ Y SIDLV +I+R+LRK K K+ + F++
Sbjct: 52 VTIPVKGN-IIRSEQESDDMYVSIDLVEEVIERQLRKYKNKLVAKNQEGNNFSK 104
[92][TOP]
>UniRef100_C0BYR7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM
15053 RepID=C0BYR7_9CLOT
Length = 178
Score = 64.3 bits (155), Expect = 6e-09
Identities = 43/113 (38%), Positives = 65/113 (57%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K II GKN+D+T +++ VE K+GK ++K+ EI V LS + E
Sbjct: 1 MKFIISGKNIDVTPGLRETVEHKLGK-LEKYFTSDTEIIVTLSVE--------KERQKIE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFN 548
VT+ K + ++R+E+ S Y SIDLV +I+R+LRK K K+ RH +G N
Sbjct: 52 VTIPVKGN-IIRSEQVSSDMYVSIDLVEEVIERQLRKYKNKLV--ARHQEGGN 101
[93][TOP]
>UniRef100_A6BHR0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM
13814 RepID=A6BHR0_9FIRM
Length = 178
Score = 64.3 bits (155), Expect = 6e-09
Identities = 41/102 (40%), Positives = 63/102 (61%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K II GKN+D+T +++ VE K+GK + ++ EI V LS + G + + E
Sbjct: 1 MKFIIIGKNIDVTPGLREAVESKLGK-LGRYFTPNTEIHVTLSVQKGHQ--------KIE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKV 515
VT+ K G+VR+E++S Y SIDLV +I+R+LRK K K+
Sbjct: 52 VTIPVKG-GLVRSEQESSDMYVSIDLVEEVIERQLRKYKNKL 92
[94][TOP]
>UniRef100_C6SS06 Putative ribosome-associated protein n=2 Tax=Streptococcus mutans
RepID=C6SS06_STRMN
Length = 182
Score = 63.9 bits (154), Expect = 8e-09
Identities = 38/110 (34%), Positives = 69/110 (62%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K I+G+N+++TDA++ +VE K+ K ++K+ + +E+D R++ + E +T++ E
Sbjct: 2 IKYSIRGENIEVTDAIRNYVESKL-KKIEKYFNAEQELDARINLKVYRE-----KTAKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMK 539
VT+ +RAE+ S+ Y SIDLV I+R++RK K K++ R K
Sbjct: 56 VTI-PLAPVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHREKK 104
[95][TOP]
>UniRef100_A5KKP2 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC
27756 RepID=A5KKP2_9FIRM
Length = 198
Score = 63.9 bits (154), Expect = 8e-09
Identities = 39/105 (37%), Positives = 63/105 (60%)
Frame = +3
Query: 201 LSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTS 380
L+S+ II GKN+++T +K+ +E K+GK ++++ EI V LS G +
Sbjct: 11 LNSMNFIISGKNIEVTPGLKEAIEQKLGK-LERYFTPETEIIVTLSVEKGRQ-------- 61
Query: 381 RCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKV 515
+ EVT+ K ++R+E+ S Y SIDLV +I+R+LRK K K+
Sbjct: 62 KIEVTIPVKG-SIIRSEQTSSDMYVSIDLVEEVIERQLRKYKNKL 105
[96][TOP]
>UniRef100_Q7NMI0 Glr0786 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NMI0_GLOVI
Length = 187
Score = 63.5 bits (153), Expect = 1e-08
Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
++ I GKN+++T+ ++ +V K+ K + +DV LS R PR SR
Sbjct: 1 MQFAIHGKNIEVTEPIRDYVSSKLDKVFAHFDQLTMGVDVYLSV------ARNPRISRSH 54
Query: 390 VTLFTKRHG--VVRAEEDSETTYASIDLVSSIIQRKLRKIKEKV 515
T + ++RAEE++E YASIDLV+ + R++RK KE++
Sbjct: 55 SAEVTVQASGTIIRAEEETENLYASIDLVADKLHRQMRKYKERM 98
[97][TOP]
>UniRef100_C8WMZ8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Eggerthella lenta DSM 2243 RepID=C8WMZ8_9ACTN
Length = 191
Score = 63.5 bits (153), Expect = 1e-08
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 2/106 (1%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKA--VQKHSHIVREIDVRLSTRGGGEFGRGPRTSR 383
+ + + G+ + +TDA++++ E+K+G + V +V EI + + PR +
Sbjct: 1 MSITVTGRKMPVTDALREYAEEKIGNSMKVMDIDPLVAEIVLFVEKNPAN-----PRPAV 55
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSD 521
CEVTL TK H ++R EE E YA+ID+ ++ + R+LRK K KV D
Sbjct: 56 CEVTLRTKGH-IIRVEEHEEDMYAAIDVAAAKVVRQLRKYKTKVVD 100
[98][TOP]
>UniRef100_C0CJV5 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica
DSM 10507 RepID=C0CJV5_9FIRM
Length = 175
Score = 63.5 bits (153), Expect = 1e-08
Identities = 42/119 (35%), Positives = 67/119 (56%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+ II GKNL +TD ++ VEDK+GK ++++ EI V LS + + E
Sbjct: 1 MNFIISGKNLTVTDGLRTAVEDKLGK-LERYFTPDTEIIVTLSVEKSRQ--------KIE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRAKVRE 566
VT+ K + ++R+E+ S Y SIDLV +I+R+LRK K K+ D + F +A + +
Sbjct: 52 VTIPVKGN-IIRSEQVSNDMYVSIDLVEEVIERQLRKYKTKIVDKEKAGDHFQKAFIEK 109
[99][TOP]
>UniRef100_C9MUU2 Ribosomal subunit interface protein n=1 Tax=Leptotrichia hofstadii
F0254 RepID=C9MUU2_9FUSO
Length = 106
Score = 62.8 bits (151), Expect = 2e-08
Identities = 37/107 (34%), Positives = 61/107 (57%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K+II GK L +TDA+K + E+KV K + K+S + EIDV L+ G +
Sbjct: 1 MKIIISGKQLKITDAIKNYTEEKVSK-ISKYSDAITEIDVVLTVEDTKSEGPVHKADGLV 59
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
TK ++ E +++ YA+ID +S ++R++RK KEK D+ +
Sbjct: 60 YASGTK----IKIEAENKDLYAAIDDLSDRLERQVRKYKEKQKDYNK 102
[100][TOP]
>UniRef100_B5CNW3 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC
29176 RepID=B5CNW3_9FIRM
Length = 186
Score = 62.8 bits (151), Expect = 2e-08
Identities = 37/102 (36%), Positives = 62/102 (60%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+ II GKN+++T +K +E K+GK ++++ EI+V LS G + + E
Sbjct: 1 MNFIISGKNIEVTPGLKDAIEQKLGK-LERYFTPETEINVTLSVEKGRQ--------KIE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKV 515
VT+ K + ++R+E+ S+ Y SIDLV +I+R+LRK K K+
Sbjct: 52 VTIPVKGN-IIRSEQTSDNMYVSIDLVEEVIERQLRKYKNKL 92
[101][TOP]
>UniRef100_Q3CZ63 Ribosomal subunit interface protein n=6 Tax=Streptococcus
agalactiae RepID=Q3CZ63_STRAG
Length = 184
Score = 62.4 bits (150), Expect = 2e-08
Identities = 36/103 (34%), Positives = 68/103 (66%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K I+G+N+++T+A++++VE K+ K V+K+ + +E+D R++ + E +T++ E
Sbjct: 2 IKYSIRGENIEVTEAIREYVETKLSK-VEKYFNEAQELDTRVNLKVYRE-----KTAKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVS 518
VT+ +RAE+ S+ Y SIDLV I+R++RK K K++
Sbjct: 56 VTILIDSI-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIA 97
[102][TOP]
>UniRef100_C7N909 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Leptotrichia buccalis DSM 1135 RepID=C7N909_LEPBD
Length = 106
Score = 62.4 bits (150), Expect = 2e-08
Identities = 35/107 (32%), Positives = 61/107 (57%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K+II GK L +TDA+K + E+K+ + + K+S + EIDV L+ G +
Sbjct: 1 MKIIISGKQLKITDAIKNYTEEKISR-ISKYSDAITEIDVVLTVEDTKSEGPVHKADGLV 59
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
TK ++ E +++ YA+ID +S ++R++RK KE+ DH +
Sbjct: 60 FASGTK----IKIEAENKDLYAAIDDLSDRLERQVRKYKERQKDHNK 102
[103][TOP]
>UniRef100_C4BVH6 Sigma 54 modulation protein; SSU ribosomal protein S30P n=1
Tax=Sebaldella termitidis ATCC 33386 RepID=C4BVH6_9FUSO
Length = 106
Score = 62.4 bits (150), Expect = 2e-08
Identities = 36/108 (33%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+ +II G+ L++T+ +K++ E+K+G+ + HI EIDV LS G R +
Sbjct: 1 MNIIISGRRLEVTEPIKKYAEEKIGRVNKYFDHIT-EIDVTLSVEKSKVEGE---IHRAD 56
Query: 390 VTLFTKRHGV-VRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
V LF +G+ ++ E + + YA+ID + +++RK+R+ KEK+ DH +
Sbjct: 57 VLLFG--NGLKLKVEMEDKDLYAAIDKATDVLERKVRQHKEKLKDHNK 102
[104][TOP]
>UniRef100_C4Z2Z4 Putative sigma-54 modulation protein n=1 Tax=Eubacterium eligens
ATCC 27750 RepID=C4Z2Z4_EUBE2
Length = 175
Score = 62.0 bits (149), Expect = 3e-08
Identities = 37/112 (33%), Positives = 64/112 (57%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
++ II G+N+D+T+ +K VE+K+GK + + E++V LS + E
Sbjct: 1 MRFIITGRNIDITEGLKSAVEEKLGK-LDRFFAPETEVNVTLSVE--------KERQKIE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGF 545
VT+ K + ++R+E+ S Y SIDLV +I+R+L+K K K+ D ++ F
Sbjct: 52 VTIPVKGN-IIRSEQVSSDMYVSIDLVEEVIERQLKKYKNKIVDKQQNAAAF 102
[105][TOP]
>UniRef100_C4ZI34 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Eubacterium rectale
ATCC 33656 RepID=C4ZI34_EUBR3
Length = 175
Score = 61.6 bits (148), Expect = 4e-08
Identities = 38/103 (36%), Positives = 62/103 (60%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+++ I GKN++LT+ +KQ VE+K+ K ++K ++ V LS + + E
Sbjct: 1 MRITISGKNIELTEGLKQAVEEKLSK-LEKFFKPDTDVYVTLSVEKDRQ--------KIE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVS 518
VT+ K H V+R+E+ S Y SIDLV +I+R+LRK + K+S
Sbjct: 52 VTIPAKGH-VIRSEQVSNDMYVSIDLVEEVIERQLRKYRTKIS 93
[106][TOP]
>UniRef100_Q3DA79 Ribosomal subunit interface protein n=2 Tax=Streptococcus
agalactiae RepID=Q3DA79_STRAG
Length = 184
Score = 61.6 bits (148), Expect = 4e-08
Identities = 36/103 (34%), Positives = 68/103 (66%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K I+G+N+++T+A++++VE K+ K V+K+ + +E+D R++ + E +T++ E
Sbjct: 2 IKYSIRGENIEVTEAIREYVETKLSK-VEKYFNEEQELDTRVNLKVYRE-----KTAKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVS 518
VT+ +RAE+ S+ Y SIDLV I+R++RK K K++
Sbjct: 56 VTILIDSI-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIA 97
[107][TOP]
>UniRef100_C6JE61 Putative uncharacterized protein n=1 Tax=Ruminococcus sp.
5_1_39BFAA RepID=C6JE61_9FIRM
Length = 175
Score = 61.6 bits (148), Expect = 4e-08
Identities = 39/115 (33%), Positives = 64/115 (55%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K II GKN+ +T+ +K V+DK+ K ++++ E+ V LS + E
Sbjct: 1 MKFIISGKNITVTEGLKTAVQDKLSK-LERYFTPDTEVVVTLSVE--------KERQKIE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRA 554
VT+ K + ++R+E+ S Y SIDLV +I+R+LRK K K+ D + F +A
Sbjct: 52 VTIPVKGN-IIRSEQVSNDMYVSIDLVEEVIERQLRKYKNKIVDKQQAAANFQKA 105
[108][TOP]
>UniRef100_B4U4G1 Ribosomal subunit interface protein n=1 Tax=Streptococcus equi
subsp. zooepidemicus MGCS10565 RepID=B4U4G1_STREM
Length = 182
Score = 61.2 bits (147), Expect = 5e-08
Identities = 37/107 (34%), Positives = 68/107 (63%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K I+G+N+++T+A++ +VE K+ K ++K+ + +EID R++ + E +T++ E
Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFVVEQEIDARVNLKVYRE-----KTAKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
VT+ +RAE+ S+ Y SIDLV I+R++RK K K++ R
Sbjct: 56 VTI-PLGSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHR 101
[109][TOP]
>UniRef100_B6FRG1 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM
1787 RepID=B6FRG1_9CLOT
Length = 178
Score = 61.2 bits (147), Expect = 5e-08
Identities = 38/99 (38%), Positives = 58/99 (58%)
Frame = +3
Query: 219 IIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCEVTL 398
II GKN+D+T +K +E K+GK ++++ EI V LS + EVT+
Sbjct: 4 IISGKNIDVTPGLKSTIEQKLGK-LERYFTPDTEIIVTLSVE--------KERQKIEVTI 54
Query: 399 FTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKV 515
K H ++R+E+ S+ Y SIDLV +I+R+LRK K K+
Sbjct: 55 PVKGH-IIRSEQVSDDMYVSIDLVEEVIERQLRKYKNKL 92
[110][TOP]
>UniRef100_B0A7Y1 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM
16795 RepID=B0A7Y1_9CLOT
Length = 187
Score = 61.2 bits (147), Expect = 5e-08
Identities = 34/102 (33%), Positives = 59/102 (57%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K++I GK ++LTD +K VEDK+ K + ++ H E+ V +S R + + E
Sbjct: 7 MKILITGKKIELTDGIKGAVEDKLSK-LDRYLHEDTEVKVTVSARKAKQ--------KIE 57
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKV 515
VT+ ++RAE+ E YA+ID+V + ++LR+ K K+
Sbjct: 58 VTIIPINGPIIRAEDSEENLYAAIDVVYDKLNKQLRRYKNKL 99
[111][TOP]
>UniRef100_A5Z528 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum
ATCC 27560 RepID=A5Z528_9FIRM
Length = 179
Score = 61.2 bits (147), Expect = 5e-08
Identities = 38/110 (34%), Positives = 63/110 (57%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K+ I GKN+++T+ ++ VE+K+GK + K+ +DV LS + + E
Sbjct: 1 MKIKIFGKNIEVTEGIRSAVEEKIGK-LDKYFAEETRVDVTLSVNKNEQ--------KVE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMK 539
VT+ K ++RAEE S+ Y SID+V I+R+L K K K+ D + +K
Sbjct: 52 VTIPVKGR-IIRAEEISDDMYVSIDMVEETIERQLVKYKNKIIDKKKSIK 100
[112][TOP]
>UniRef100_C4V4X1 Ribosome-associated inhibitor A n=1 Tax=Selenomonas flueggei ATCC
43531 RepID=C4V4X1_9FIRM
Length = 181
Score = 60.8 bits (146), Expect = 7e-08
Identities = 39/99 (39%), Positives = 60/99 (60%)
Frame = +3
Query: 222 IQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCEVTLF 401
I+GKN+++T A++ +VE +VGK + K+ V EI V LS G + + EVT
Sbjct: 6 IRGKNVEVTPALRDYVEKRVGK-ITKYFDNVGEIAVLLSVEG--------KHHKVEVTAP 56
Query: 402 TKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVS 518
R ++R EE SE Y+SIDLV ++R++RK K K++
Sbjct: 57 VARGILLRGEEHSEDMYSSIDLVIEKLERQIRKQKTKLA 95
[113][TOP]
>UniRef100_A8U6N5 Ribosomal subunit interface protein n=1 Tax=Carnobacterium sp. AT7
RepID=A8U6N5_9LACT
Length = 180
Score = 60.8 bits (146), Expect = 7e-08
Identities = 39/112 (34%), Positives = 69/112 (61%)
Frame = +3
Query: 213 KLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCEV 392
K ++G+N+++T A++ +VE KVGK V+K+ + V E ++ + + +T++ EV
Sbjct: 3 KYNVRGENIEVTAAIRSYVEKKVGK-VEKYFNDVPEATAHVNLKTYSD-----KTAKVEV 56
Query: 393 TLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFN 548
T+ + V+RAEE S Y S+DLVS ++R++RK K K++ R +G N
Sbjct: 57 TI-PLPYLVLRAEETSPDLYGSVDLVSDKLERQMRKYKTKIN---RRTRGSN 104
[114][TOP]
>UniRef100_A5ZRI8 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC
29174 RepID=A5ZRI8_9FIRM
Length = 175
Score = 60.8 bits (146), Expect = 7e-08
Identities = 39/114 (34%), Positives = 63/114 (55%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K II GKN+ ++ +K VEDK+GK ++++ E+ V LS + E
Sbjct: 1 MKFIISGKNITVSQGLKTAVEDKLGK-LERYFTPDTEVVVTLSVE--------KERQKIE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNR 551
VT+ K + ++R+E+ S Y SIDLV +I+R+LRK K K+ D + F +
Sbjct: 52 VTIPMKGN-IIRSEQVSNDMYVSIDLVEEVIERQLRKYKNKIVDKQQAAANFQK 104
[115][TOP]
>UniRef100_Q1IYK5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Deinococcus geothermalis DSM 11300
RepID=Q1IYK5_DEIGD
Length = 186
Score = 60.1 bits (144), Expect = 1e-07
Identities = 36/101 (35%), Positives = 61/101 (60%)
Frame = +3
Query: 222 IQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCEVTLF 401
+ G+N+D+TDA++ +VE+K+ + + + S + + V L+ R + GR +R EV L
Sbjct: 6 LSGRNVDVTDAMRDYVEEKLTR-LDRFSDQITDARVVLTVRDVRDAGR---RNRVEVQLN 61
Query: 402 TKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDH 524
+G++RAEE YA+ID S +++R+LRK K K H
Sbjct: 62 VP-NGIIRAEEHHADMYAAIDRASDVLERQLRKFKTKYLRH 101
[116][TOP]
>UniRef100_B9DV32 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Streptococcus uberis 0140J RepID=B9DV32_STRU0
Length = 182
Score = 60.1 bits (144), Expect = 1e-07
Identities = 37/107 (34%), Positives = 67/107 (62%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K I+G+N+++T+A++ +VE K+ K ++K+ EID R++ + E +T++ E
Sbjct: 2 IKFSIRGENIEVTEAIRDYVEAKLAK-IEKYFVEDSEIDTRVNLKVYRE-----KTAKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
VT+ ++RAE+ S+ Y SIDLV I+R++RK K K++ R
Sbjct: 56 VTIILGSM-ILRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHR 101
[117][TOP]
>UniRef100_C4G2X0 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC
49176 RepID=C4G2X0_ABIDE
Length = 175
Score = 60.1 bits (144), Expect = 1e-07
Identities = 37/119 (31%), Positives = 66/119 (55%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K II G+ ++TD ++ +E+K+GK ++ + E+ V L + + E
Sbjct: 1 MKYIINGRGTNVTDGLRNAIEEKLGK-LEHYFTPDTEVHVTLKVEKDRQ--------KVE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRAKVRE 566
VT+ K H ++RAE+ S+ Y SIDL+ II+R+LR+ K K+ D + F A +++
Sbjct: 52 VTVPVKGH-IIRAEQVSDDMYVSIDLIEDIIERQLRRYKTKIVDSKQSASNFTSAFMQD 109
[118][TOP]
>UniRef100_C2D8Z3 Possible ribosome-associated inhibitor A n=1 Tax=Atopobium vaginae
DSM 15829 RepID=C2D8Z3_9ACTN
Length = 192
Score = 60.1 bits (144), Expect = 1e-07
Identities = 36/100 (36%), Positives = 53/100 (53%)
Frame = +3
Query: 222 IQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCEVTLF 401
I G+ + ++DA++ HV+ KVG A++ DV L P CEVT++
Sbjct: 6 ISGRKVSVSDALRDHVQHKVGDALKVFDITPMSCDVVLRVDKNHS---NPDRKTCEVTVY 62
Query: 402 TKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSD 521
R+ VVR E SE YA+ID S + R+LRK K ++ D
Sbjct: 63 V-RNNVVRVEASSEDMYAAIDAASDKVTRQLRKYKTRIID 101
[119][TOP]
>UniRef100_UPI00017F5F53 putative RNA-binding protein n=1 Tax=Clostridium difficile
QCD-23m63 RepID=UPI00017F5F53
Length = 183
Score = 59.7 bits (143), Expect = 1e-07
Identities = 33/110 (30%), Positives = 61/110 (55%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+ +II GK ++LTDA+K +E K+ K + + H ++ V +S R + + E
Sbjct: 1 MNIIISGKQIELTDAIKNKIESKLSK-LDNYIHPDTDVKVTVSARKARQ--------KIE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMK 539
VT+ T ++RAE+ E Y +ID+V + ++L+K K+++ D + K
Sbjct: 52 VTIATVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNK 101
[120][TOP]
>UniRef100_UPI00004C2450 COG1544: Ribosome-associated protein Y (PSrp-1) n=1
Tax=Streptococcus pyogenes M49 591 RepID=UPI00004C2450
Length = 182
Score = 59.7 bits (143), Expect = 1e-07
Identities = 38/107 (35%), Positives = 67/107 (62%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K I+G+N+++T+A++ +VE K+ K ++K+ +EID R++ + E R+S+ E
Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFAKDQEIDARVNLKVYRE-----RSSKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
VT+ +RAE+ S+ Y SIDLV I+R++RK K K++ R
Sbjct: 56 VTI-PLDSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHR 101
[121][TOP]
>UniRef100_Q9CHS8 Putative uncharacterized protein ygdA n=1 Tax=Lactococcus lactis
subsp. lactis RepID=Q9CHS8_LACLA
Length = 185
Score = 59.7 bits (143), Expect = 1e-07
Identities = 35/108 (32%), Positives = 68/108 (62%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K I+G+N+++TDA++ +VEDK+GK + K+ + E+ ++ + E + ++ E
Sbjct: 2 IKFNIRGENVEVTDAIRAYVEDKIGK-LDKYFNDGHEVTAYVNLKVYSE-----KRAKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRH 533
VTL K + +RAE+ S+ Y+SID V ++R++RK K +++ R+
Sbjct: 56 VTLPAK-NVTLRAEDTSQDMYSSIDFVEEKLERQIRKYKTRMNRKPRN 102
[122][TOP]
>UniRef100_C0FKQ0 Putative uncharacterized protein n=1 Tax=Clostridium sp. M62/1
RepID=C0FKQ0_9CLOT
Length = 175
Score = 59.7 bits (143), Expect = 1e-07
Identities = 39/119 (32%), Positives = 67/119 (56%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
++ I G+N+D+T +++ V +K+GK ++++ + E + LS + + E
Sbjct: 1 MRYTITGRNIDVTPGLREAVIEKIGK-LERYFNQDTEAIITLSVTKDRQ--------KIE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRAKVRE 566
VT+ K H ++RAEE S Y SIDLV II+R+L+K K K+ D + F+ V+E
Sbjct: 52 VTIPVKGH-IIRAEEQSTDMYVSIDLVEEIIERQLKKYKRKLIDKKQAPVDFSELFVQE 109
[123][TOP]
>UniRef100_A7B7M8 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC
29149 RepID=A7B7M8_RUMGN
Length = 185
Score = 59.7 bits (143), Expect = 1e-07
Identities = 36/102 (35%), Positives = 59/102 (57%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+ II GKN+D+T +K +E K+GK ++++ EI V LS + E
Sbjct: 1 MNFIISGKNIDVTPGLKDAIEQKLGK-LERYFTPETEIIVTLSVE--------KERQKIE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKV 515
VT+ K + ++R+E+ S+ Y S+DLV +I+R+LRK K K+
Sbjct: 52 VTIPVKGN-IIRSEQTSDDMYVSVDLVEEVIERQLRKYKNKL 92
[124][TOP]
>UniRef100_Q5XAQ7 Ribosome-associated factor Y n=10 Tax=Streptococcus pyogenes
RepID=RAFY_STRP6
Length = 182
Score = 59.7 bits (143), Expect = 1e-07
Identities = 38/107 (35%), Positives = 67/107 (62%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K I+G+N+++T+A++ +VE K+ K ++K+ +EID R++ + E R+S+ E
Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFAKDQEIDARVNLKVYRE-----RSSKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
VT+ +RAE+ S+ Y SIDLV I+R++RK K K++ R
Sbjct: 56 VTI-PLDSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHR 101
[125][TOP]
>UniRef100_C9XIR4 Putative RNA-binding protein n=3 Tax=Clostridium difficile
RepID=C9XIR4_CLODI
Length = 183
Score = 59.3 bits (142), Expect = 2e-07
Identities = 33/110 (30%), Positives = 61/110 (55%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+ +II GK ++LTDA+K +E K+ K + + H ++ V +S R + + E
Sbjct: 1 MNIIISGKQIELTDAIKNKIETKLSK-LDNYIHPDTDVKVTVSARKARQ--------KIE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMK 539
VT+ T ++RAE+ E Y +ID+V + ++L+K K+++ D + K
Sbjct: 52 VTIATVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNK 101
[126][TOP]
>UniRef100_Q18CN1 Putative RNA-binding protein n=1 Tax=Clostridium difficile 630
RepID=Q18CN1_CLOD6
Length = 183
Score = 59.3 bits (142), Expect = 2e-07
Identities = 33/110 (30%), Positives = 61/110 (55%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+ +II GK ++LTDA+K +E K+ K + + H ++ V +S R + + E
Sbjct: 1 MNIIISGKQIELTDAIKNKIETKLSK-LDNYIHPDTDVKVTVSARKARQ--------KIE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMK 539
VT+ T ++RAE+ E Y +ID+V + ++L+K K+++ D + K
Sbjct: 52 VTIATVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNK 101
[127][TOP]
>UniRef100_Q030Z0 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Lactococcus lactis subsp. cremoris SK11
RepID=Q030Z0_LACLS
Length = 185
Score = 59.3 bits (142), Expect = 2e-07
Identities = 35/108 (32%), Positives = 68/108 (62%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K I+G+N+++TDA++ +VEDK+GK + K+ + E+ ++ + E + ++ E
Sbjct: 2 IKFNIRGENVEVTDAIRDYVEDKIGK-LDKYFNDGHEVTAYVNLKVYTE-----KRAKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRH 533
VTL K + +RAE+ S+ Y+SID V ++R++RK K +++ R+
Sbjct: 56 VTLPAK-NVTLRAEDTSQDMYSSIDFVEEKLERQIRKYKTRMNRKPRN 102
[128][TOP]
>UniRef100_C2KX79 Ribosome-associated inhibitor A n=1 Tax=Oribacterium sinus F0268
RepID=C2KX79_9FIRM
Length = 176
Score = 59.3 bits (142), Expect = 2e-07
Identities = 41/119 (34%), Positives = 63/119 (52%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K+ I G+NL LTD +K VE K+GK + K +V LST+ + + E
Sbjct: 1 MKITITGRNLSLTDGLKNGVEKKLGK-LDKFFQAETPCNVTLSTQKDMQ--------KIE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRAKVRE 566
VT+ K V+RAEE + Y SIDLV +++R++RK K K+ + F+ + E
Sbjct: 52 VTIPVKG-SVIRAEEATPDMYQSIDLVVDVLERQIRKYKNKLIQRHQAASDFSSEFIEE 109
[129][TOP]
>UniRef100_C0MH43 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Steptococcus equi subsp. zooepidemicus H70
RepID=C0MH43_STRS7
Length = 182
Score = 58.9 bits (141), Expect = 3e-07
Identities = 37/107 (34%), Positives = 67/107 (62%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K I+G+N+++T+A++ +VE K+ K ++K+ +EID R++ + E +T++ E
Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KTAKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
VT+ +RAE+ S+ Y SIDLV I+R++RK K K++ R
Sbjct: 56 VTI-PLGSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHR 101
[130][TOP]
>UniRef100_C0M6F8 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Streptococcus equi subsp. equi 4047
RepID=C0M6F8_STRE4
Length = 182
Score = 58.9 bits (141), Expect = 3e-07
Identities = 37/107 (34%), Positives = 67/107 (62%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K I+G+N+++T+A++ +VE K+ K ++K+ +EID R++ + E +T++ E
Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KTAKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
VT+ +RAE+ S+ Y SIDLV I+R++RK K K++ R
Sbjct: 56 VTI-PLGSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHR 101
[131][TOP]
>UniRef100_A3CPW1 30S ribosomal interface protein S30EA, putative n=1
Tax=Streptococcus sanguinis SK36 RepID=A3CPW1_STRSV
Length = 180
Score = 58.9 bits (141), Expect = 3e-07
Identities = 37/108 (34%), Positives = 67/108 (62%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K I+G+NL++TDA++ +V K+ K ++K+ +E+D R++ + E +T++ E
Sbjct: 2 LKYSIRGENLEVTDALRDYVVSKLEK-IEKYFQAEQELDARVNLKVYRE-----KTAKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRH 533
VT+ +RAE+ S+ Y SIDLV+ I+R++RK K K+ R+
Sbjct: 56 VTI-PLGSITLRAEDISQDMYGSIDLVTDKIERQIRKNKTKIERKNRN 102
[132][TOP]
>UniRef100_A2RIX0 Putative Sigma 54 modulation protein n=2 Tax=Lactococcus lactis
RepID=A2RIX0_LACLM
Length = 185
Score = 58.9 bits (141), Expect = 3e-07
Identities = 35/108 (32%), Positives = 68/108 (62%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K I+G+N+++TDA++ +VEDK+GK + K+ + E+ ++ + E + ++ E
Sbjct: 2 IKFNIRGENVEVTDAIRAYVEDKIGK-LDKYFNDGHEVTAYVNLKVYTE-----KRAKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRH 533
VTL K + +RAE+ S+ Y+SID V ++R++RK K +++ R+
Sbjct: 56 VTLPAK-NVTLRAEDTSQDMYSSIDFVEEKLERQIRKYKTRMNRKPRN 102
[133][TOP]
>UniRef100_C5WIE9 Ribosome-associated factor Y n=1 Tax=Streptococcus dysgalactiae
subsp. equisimilis GGS_124 RepID=C5WIE9_STRDG
Length = 182
Score = 58.5 bits (140), Expect = 3e-07
Identities = 37/107 (34%), Positives = 67/107 (62%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K I+G+N+++T+A++ +VE K+ K ++K+ +EID R++ + E ++S+ E
Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KSSKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
VT+ +RAE+ S+ Y SIDLV I+R++RK K K++ R
Sbjct: 56 VTI-PLGSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHR 101
[134][TOP]
>UniRef100_C9CNP3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Enterococcus casseliflavus EC10 RepID=C9CNP3_ENTCA
Length = 185
Score = 58.5 bits (140), Expect = 3e-07
Identities = 36/103 (34%), Positives = 65/103 (63%)
Frame = +3
Query: 222 IQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCEVTLF 401
++G+N+++T+A++ +VE KVGK ++++ + V E ++ + E +T++ EVT+
Sbjct: 6 VRGENIEVTEAIRDYVEKKVGK-LERYFNDVPEATAHVNLKVYTE-----KTAKVEVTI- 58
Query: 402 TKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
V+RAEE S YASIDLV ++R++RK K K++ R
Sbjct: 59 PLPFLVLRAEETSPDLYASIDLVVDKLERQIRKFKTKINRKSR 101
[135][TOP]
>UniRef100_C9A0V6 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Enterococcus gallinarum EG2 RepID=C9A0V6_ENTGA
Length = 185
Score = 58.5 bits (140), Expect = 3e-07
Identities = 36/103 (34%), Positives = 65/103 (63%)
Frame = +3
Query: 222 IQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCEVTLF 401
++G+N+++T+A++ +VE KVGK ++++ + V E ++ + E +T++ EVT+
Sbjct: 6 VRGENIEVTEAIRDYVEKKVGK-LERYFNDVPEATAHVNLKVYTE-----KTAKVEVTI- 58
Query: 402 TKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
V+RAEE S YASIDLV ++R++RK K K++ R
Sbjct: 59 PLPFLVLRAEETSPDLYASIDLVVDKLERQIRKFKTKINRKSR 101
[136][TOP]
>UniRef100_C4DYV6 SSU ribosomal protein S30P n=1 Tax=Streptobacillus moniliformis DSM
12112 RepID=C4DYV6_9FUSO
Length = 102
Score = 58.5 bits (140), Expect = 3e-07
Identities = 35/104 (33%), Positives = 60/104 (57%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K+II GK L++T+ +K++VE K+ K + K+ + E DV L+ G+ +
Sbjct: 1 MKIIISGKQLEMTEPIKKYVESKISK-ITKYLENIPETDVTLTVEPTKSEGK---LYKAI 56
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSD 521
T++ +R EE YA+ID +SS ++R++RK KEK+ D
Sbjct: 57 ATVYAPNK-TIRQEETDADLYAAIDNLSSGLERQVRKYKEKMKD 99
[137][TOP]
>UniRef100_C2LQ50 Ribosomal subunit interface protein, ribosomal protein S30AE family
n=1 Tax=Streptococcus salivarius SK126
RepID=C2LQ50_STRSL
Length = 182
Score = 58.5 bits (140), Expect = 3e-07
Identities = 36/103 (34%), Positives = 68/103 (66%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K I+G+N+++T+A++ +VE K+ K V+K+ + +E++ R++ + E +T++ E
Sbjct: 2 IKYSIRGENIEVTEALRDYVESKLSK-VEKYFNEDQELNARVNLKVYRE-----KTAKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVS 518
VT+ T +RAE+ S+ Y SIDLV I+R++RK K K++
Sbjct: 56 VTIPTGSV-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIA 97
[138][TOP]
>UniRef100_C0X601 Ribosome-associated inhibitor protein Y n=22 Tax=Enterococcus
faecalis RepID=C0X601_ENTFA
Length = 189
Score = 58.5 bits (140), Expect = 3e-07
Identities = 39/112 (34%), Positives = 68/112 (60%)
Frame = +3
Query: 222 IQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCEVTLF 401
++G+N+++T+A++ +VE KVGK ++++ E V ++ + E +T++ EVT+
Sbjct: 12 VRGENIEVTEAIRDYVEKKVGK-LERYFSDSPEATVHVNLKVYTE-----KTAKVEVTI- 64
Query: 402 TKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRAK 557
+ V+RAEE S YASIDLV ++R++RK K K++ R G N K
Sbjct: 65 PLPYLVLRAEETSPDLYASIDLVVDKLERQIRKFKTKINRKSRE-TGRNNTK 115
[139][TOP]
>UniRef100_B7AN97 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus
ATCC 43243 RepID=B7AN97_9BACE
Length = 179
Score = 58.5 bits (140), Expect = 3e-07
Identities = 36/112 (32%), Positives = 62/112 (55%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
++ +I G+N+++TD +K+ VE+K+GK + + E+ V LS + E
Sbjct: 4 MRFVIVGRNIEVTDGLKEAVEEKLGK-LDRFFAPDTEVKVTLSVE--------KERQKIE 54
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGF 545
VT+ K ++R+E+ S Y SIDLV +I+R+L+K K K+ D + F
Sbjct: 55 VTIPVK-GSIIRSEQVSNDMYVSIDLVEEVIERQLKKYKNKLIDKQQDAAAF 105
[140][TOP]
>UniRef100_A6CQE4 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. SG-1
RepID=A6CQE4_9BACI
Length = 189
Score = 58.5 bits (140), Expect = 3e-07
Identities = 34/99 (34%), Positives = 64/99 (64%)
Frame = +3
Query: 222 IQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCEVTLF 401
I+G+N+++T A++ HVE+K+GK + ++ + + DV ++ + + + ++ EVT+
Sbjct: 6 IRGENIEVTPAIRDHVENKIGK-LNRYFNETPDADVHVNLKVYPD-----KKTKVEVTI- 58
Query: 402 TKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVS 518
H V+RAEE E YA+IDL+ ++R++RK K KV+
Sbjct: 59 PMPHLVLRAEERHEDMYAAIDLIVDKLERQIRKHKTKVN 97
[141][TOP]
>UniRef100_Q4L4H7 Uncharacterized protein SH2139 n=1 Tax=Staphylococcus haemolyticus
JCSC1435 RepID=Y2139_STAHJ
Length = 192
Score = 58.5 bits (140), Expect = 3e-07
Identities = 35/104 (33%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREI-DVRLSTRGGGEFGRGPRTSRC 386
++ I G NL +TDA++ ++EDK+GK + + + + V++ T T++
Sbjct: 2 IRFEIHGDNLTITDAIRNYIEDKIGKLERYFNDVPNAVAHVKVKTYQNS-------TTKI 54
Query: 387 EVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVS 518
EVT+ K + +RAEE + YA IDLV+S ++R++RK K +V+
Sbjct: 55 EVTIPLK-NVTLRAEERHDDLYAGIDLVTSKLERQVRKYKTRVN 97
[142][TOP]
>UniRef100_C9BUA9 Sigma 54 modulation protein/ribosomal protein S30EA n=3
Tax=Enterococcus faecium RepID=C9BUA9_ENTFC
Length = 183
Score = 57.8 bits (138), Expect = 6e-07
Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Frame = +3
Query: 222 IQGKNLDLTDAVKQHVEDKVGKAVQKHSHI---VREIDVRLSTRGGGEFGRGPRTSRCEV 392
++G+N+++T+A++ +VE KVGK + S +++++ T +T++ EV
Sbjct: 6 VRGENIEVTEAIRDYVEKKVGKLERYFSDAPDATAHVNLKVYTE---------KTAKVEV 56
Query: 393 TLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRA 554
T+ + V+RAEE S YASIDLV ++R++RK K K++ R G N A
Sbjct: 57 TI-PLPYLVLRAEETSPDLYASIDLVVDKLERQIRKFKTKINRKSRE-TGMNTA 108
[143][TOP]
>UniRef100_C9BP47 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Enterococcus faecium RepID=C9BP47_ENTFC
Length = 183
Score = 57.8 bits (138), Expect = 6e-07
Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Frame = +3
Query: 222 IQGKNLDLTDAVKQHVEDKVGKAVQKHSHI---VREIDVRLSTRGGGEFGRGPRTSRCEV 392
++G+N+++T+A++ +VE KVGK + S +++++ T +T++ EV
Sbjct: 6 VRGENIEVTEAIRDYVEKKVGKLERYFSDAPDATAHVNLKVYTE---------KTAKVEV 56
Query: 393 TLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRA 554
T+ + V+RAEE S YASIDLV ++R++RK K K++ R G N A
Sbjct: 57 TI-PLPYLVLRAEETSPDLYASIDLVVDKLERQIRKFKTKINRKSRE-TGMNTA 108
[144][TOP]
>UniRef100_C9B3Z6 Sigma 54 modulation protein/ribosomal protein S30EA n=3
Tax=Enterococcus faecium RepID=C9B3Z6_ENTFC
Length = 183
Score = 57.8 bits (138), Expect = 6e-07
Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Frame = +3
Query: 222 IQGKNLDLTDAVKQHVEDKVGKAVQKHSHI---VREIDVRLSTRGGGEFGRGPRTSRCEV 392
++G+N+++T+A++ +VE KVGK + S +++++ T +T++ EV
Sbjct: 6 VRGENIEVTEAIRDYVEKKVGKLERYFSDAPDATAHVNLKVYTE---------KTAKVEV 56
Query: 393 TLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRA 554
T+ + V+RAEE S YASIDLV ++R++RK K K++ R G N A
Sbjct: 57 TI-PLPYLVLRAEETSPDLYASIDLVVDKLERQIRKFKTKINRKSRE-TGMNTA 108
[145][TOP]
>UniRef100_C9ACD7 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Enterococcus casseliflavus RepID=C9ACD7_ENTCA
Length = 180
Score = 57.8 bits (138), Expect = 6e-07
Identities = 36/103 (34%), Positives = 65/103 (63%)
Frame = +3
Query: 222 IQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCEVTLF 401
++G+N+++T+A++ +VE KVGK ++++ + V E ++ + E +T++ EVT+
Sbjct: 1 MRGENIEVTEAIRDYVEKKVGK-LERYFNDVPEATAHVNLKVYTE-----KTAKVEVTI- 53
Query: 402 TKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
V+RAEE S YASIDLV ++R++RK K K++ R
Sbjct: 54 PLPFLVLRAEETSPDLYASIDLVVDKLERQIRKFKTKINRKSR 96
[146][TOP]
>UniRef100_C8W7H2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Atopobium parvulum DSM 20469 RepID=C8W7H2_ATOPD
Length = 196
Score = 57.8 bits (138), Expect = 6e-07
Identities = 36/110 (32%), Positives = 56/110 (50%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
V + I G+ + +++A++ HV+ K+G A++ DV L P E
Sbjct: 2 VDIKISGRKVSISEALRAHVDQKIGDALKVFDITPMSCDVVLRVDKNPS---NPDRKTTE 58
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMK 539
VT+F R+ VVR S+ YA+ID + + R+LRK K KV + HMK
Sbjct: 59 VTVFV-RNNVVRVTASSDDMYAAIDEAADKVSRQLRKYKTKVVERRHHMK 107
[147][TOP]
>UniRef100_C5QVF5 Ribosome-associated inhibitor protein Y n=1 Tax=Staphylococcus
epidermidis W23144 RepID=C5QVF5_STAEP
Length = 189
Score = 57.8 bits (138), Expect = 6e-07
Identities = 34/104 (32%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREI-DVRLSTRGGGEFGRGPRTSRC 386
++ I G NL +TDA++ ++E+KVGK + +++ + VR+ T T++
Sbjct: 2 IRFEIHGDNLTITDAIRNYIEEKVGKLERYFNNVPNAVAHVRVKTYSNS-------TTKI 54
Query: 387 EVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVS 518
EVT+ K +RAEE + YA IDL+++ ++R++RK K +V+
Sbjct: 55 EVTIPLK-DVTLRAEERHDDLYAGIDLITNKLERQVRKYKTRVN 97
[148][TOP]
>UniRef100_C2HCP0 Ribosome-associated inhibitor protein Y n=4 Tax=Enterococcus
faecium RepID=C2HCP0_ENTFC
Length = 183
Score = 57.8 bits (138), Expect = 6e-07
Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Frame = +3
Query: 222 IQGKNLDLTDAVKQHVEDKVGKAVQKHSHI---VREIDVRLSTRGGGEFGRGPRTSRCEV 392
++G+N+++T+A++ +VE KVGK + S +++++ T +T++ EV
Sbjct: 6 VRGENIEVTEAIRDYVEKKVGKLERYFSDAPDATAHVNLKVYTE---------KTAKVEV 56
Query: 393 TLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRA 554
T+ + V+RAEE S YASIDLV ++R++RK K K++ R G N A
Sbjct: 57 TI-PLPYLVLRAEETSPDLYASIDLVVDKLERQIRKFKTKINRKSRE-TGMNTA 108
[149][TOP]
>UniRef100_B6FVY1 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
13275 RepID=B6FVY1_9CLOT
Length = 194
Score = 57.8 bits (138), Expect = 6e-07
Identities = 35/110 (31%), Positives = 59/110 (53%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+KL I GK ++LT +K ++E K+ K + K+ ++ V +S + G + E
Sbjct: 9 MKLTISGKQMELTQGIKDNIESKLSK-LDKYISPDTDVKVTVSAKKGRH--------KIE 59
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMK 539
VT+ K V+RAEE E Y +IDLV ++ +L+K K+K+ + K
Sbjct: 60 VTIAPKNGHVIRAEESQENLYPAIDLVVDKLKIQLKKYKDKMQKRHQENK 109
[150][TOP]
>UniRef100_B0MGZ9 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM
14662 RepID=B0MGZ9_9FIRM
Length = 176
Score = 57.8 bits (138), Expect = 6e-07
Identities = 32/102 (31%), Positives = 61/102 (59%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+ II GKN+++T+ ++ +E+K+G+ ++ +ID+ ++ E + E
Sbjct: 1 MNFIISGKNIEVTEGIRAAIEEKLGRL---DKYLTDDIDIIVTLSVQKE------RQKIE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKV 515
VT+ K H ++RAE+DS Y SIDLV I++R++R+ K ++
Sbjct: 52 VTIPMKGH-IIRAEQDSADMYVSIDLVIDILERQIRRYKTRL 92
[151][TOP]
>UniRef100_Q5HQX7 Uncharacterized protein SERP0419 n=3 Tax=Staphylococcus epidermidis
RepID=Y419_STAEQ
Length = 189
Score = 57.8 bits (138), Expect = 6e-07
Identities = 34/104 (32%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREI-DVRLSTRGGGEFGRGPRTSRC 386
++ I G NL +TDA++ ++E+KVGK + +++ + VR+ T T++
Sbjct: 2 IRFEIHGDNLTITDAIRNYIEEKVGKLERYFNNVPNAVAHVRVKTYSNS-------TTKI 54
Query: 387 EVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVS 518
EVT+ K +RAEE + YA IDL+++ ++R++RK K +V+
Sbjct: 55 EVTIPLK-DVTLRAEERHDDLYAGIDLITNKLERQVRKYKTRVN 97
[152][TOP]
>UniRef100_Q5M196 Ribosomal subunit interface protein, ribosomal protein S30AE family
n=2 Tax=Streptococcus thermophilus RepID=Q5M196_STRT1
Length = 182
Score = 57.4 bits (137), Expect = 7e-07
Identities = 37/103 (35%), Positives = 65/103 (63%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K I+G+N+++T+A++ +VE K+ K V+K+ H +E+ R++ + E +T++ E
Sbjct: 2 IKCSIRGENIEVTEALRDYVESKLSK-VEKYFHEDQELHARVNLKVYRE-----KTAKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVS 518
VT+ T +RAE+ S Y SIDLV I R++RK K K++
Sbjct: 56 VTIPTGSV-TLRAEDVSLDMYGSIDLVVDKIARQIRKNKTKIA 97
[153][TOP]
>UniRef100_Q03M66 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Streptococcus thermophilus LMD-9 RepID=Q03M66_STRTD
Length = 182
Score = 57.4 bits (137), Expect = 7e-07
Identities = 37/103 (35%), Positives = 65/103 (63%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K I+G+N+++T+A++ +VE K+ K V+K+ H +E+ R++ + E +T++ E
Sbjct: 2 IKYSIRGENIEVTEALRDYVESKLSK-VEKYFHEDQELHARVNLKVYRE-----KTAKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVS 518
VT+ T +RAE+ S Y SIDLV I R++RK K K++
Sbjct: 56 VTIPTGSV-TLRAEDVSLDMYGSIDLVVDKIARQIRKNKTKIA 97
[154][TOP]
>UniRef100_C1CBI3 Ribosome-associated protein Y n=1 Tax=Streptococcus pneumoniae
70585 RepID=C1CBI3_STRP7
Length = 182
Score = 57.4 bits (137), Expect = 7e-07
Identities = 35/102 (34%), Positives = 65/102 (63%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K I+G+NL++T+A++ +V K+ K ++K+ +E+D R++ + E +T++ E
Sbjct: 2 IKYSIRGENLEVTEAIRDYVVSKLEK-IEKYFQPEQELDARINLKVYRE-----KTAKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKV 515
VT+ +RAE+ S+ Y SIDLV+ I+R++RK K K+
Sbjct: 56 VTI-PLGSITLRAEDVSQDMYGSIDLVTDKIERQIRKNKTKI 96
[155][TOP]
>UniRef100_B5E3V2 Ribosomal subunit interface protein n=1 Tax=Streptococcus
pneumoniae G54 RepID=B5E3V2_STRP4
Length = 182
Score = 57.4 bits (137), Expect = 7e-07
Identities = 35/102 (34%), Positives = 65/102 (63%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K I+G+NL++T+A++ +V K+ K ++K+ +E+D R++ + E +T++ E
Sbjct: 2 IKYSIRGENLEVTEAIRDYVVSKLEK-IEKYFQPEQELDARINLKVYRE-----KTAKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKV 515
VT+ +RAE+ S+ Y SIDLV+ I+R++RK K K+
Sbjct: 56 VTI-PLGSITLRAEDVSQDMYGSIDLVTDKIERQIRKNKTKI 96
[156][TOP]
>UniRef100_C1CNI0 Ribosome-associated protein Y n=9 Tax=Streptococcus pneumoniae
RepID=C1CNI0_STRZP
Length = 182
Score = 57.4 bits (137), Expect = 7e-07
Identities = 35/102 (34%), Positives = 65/102 (63%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K I+G+NL++T+A++ +V K+ K ++K+ +E+D R++ + E +T++ E
Sbjct: 2 IKYSIRGENLEVTEAIRDYVVSKLEK-IEKYFQPEQELDARINLKVYRE-----KTAKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKV 515
VT+ +RAE+ S+ Y SIDLV+ I+R++RK K K+
Sbjct: 56 VTI-PLGSITLRAEDVSQDMYGSIDLVTDKIERQIRKNKTKI 96
[157][TOP]
>UniRef100_B1IAC2 Ribosome-associated protein Y n=15 Tax=Streptococcus pneumoniae
RepID=B1IAC2_STRPI
Length = 182
Score = 57.4 bits (137), Expect = 7e-07
Identities = 35/102 (34%), Positives = 65/102 (63%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K I+G+NL++T+A++ +V K+ K ++K+ +E+D R++ + E +T++ E
Sbjct: 2 IKYSIRGENLEVTEAIRDYVVSKLEK-IEKYFQPEQELDARINLKVYRE-----KTAKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKV 515
VT+ +RAE+ S+ Y SIDLV+ I+R++RK K K+
Sbjct: 56 VTI-PLGSITLRAEDVSQDMYGSIDLVTDKIERQIRKNKTKI 96
[158][TOP]
>UniRef100_B8BRE6 Light-repressed protein a n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8BRE6_THAPS
Length = 198
Score = 57.4 bits (137), Expect = 7e-07
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Frame = +3
Query: 216 LIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCEVT 395
+++ G N+DLT A+ +V K+ K V K V DV L+ + + T+ T
Sbjct: 7 IVVTGDNIDLTPALSDYVNSKIEKTVGKLPLAVSHCDVYLTVNKNPKV-KDAHTAEVVTT 65
Query: 396 LFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSD--HGRHMKGFNRAKV 560
L + R E S YASIDLV++ + RKLRK KE+ D HG G N A+V
Sbjct: 66 L---KGTTFRVAESSPDMYASIDLVAARLARKLRKYKERRLDGYHGGPNMGENIAEV 119
[159][TOP]
>UniRef100_UPI0001BB5516 ribosomal subunit interface protein n=1 Tax=Streptococcus sp.
2_1_36FAA RepID=UPI0001BB5516
Length = 180
Score = 57.0 bits (136), Expect = 1e-06
Identities = 36/107 (33%), Positives = 65/107 (60%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K I+G+NL++T+A++ +V K+ K ++K+ +E+D R++ + E +T++ E
Sbjct: 2 IKYSIRGENLEVTEAIRDYVVSKLEK-IEKYFQADQELDARVNLKVYRE-----KTAKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
VT+ +RAE+ S+ Y SIDLV I+R++RK K K+ R
Sbjct: 56 VTI-PLGSITLRAEDISQDMYGSIDLVVDKIERQIRKNKTKIERKNR 101
[160][TOP]
>UniRef100_B2A816 Sigma 54 modulation protein, SSU ribosomal protein S30P n=1
Tax=Natranaerobius thermophilus JW/NM-WN-LF
RepID=B2A816_NATTJ
Length = 178
Score = 57.0 bits (136), Expect = 1e-06
Identities = 36/112 (32%), Positives = 58/112 (51%)
Frame = +3
Query: 207 SVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRC 386
S+KL I GKN+D+T+A+K+H++ + K + KH E V LS
Sbjct: 2 SLKLTISGKNIDVTNALKEHIQRRFAK-LDKHFDDTVEAQVTLSVIKDNH--------NV 52
Query: 387 EVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKG 542
E T+F +VR E+ + YAS+D V ++R+++K K K++ R G
Sbjct: 53 EATMFLNGGMLVRGEQSTGDMYASVDQVIDKVERQIKKHKTKINRKLRQSGG 104
[161][TOP]
>UniRef100_A8AVW6 Ribosomal subunit interface protein n=1 Tax=Streptococcus gordonii
str. Challis RepID=A8AVW6_STRGC
Length = 180
Score = 57.0 bits (136), Expect = 1e-06
Identities = 36/107 (33%), Positives = 65/107 (60%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K I+G+NL++T+A++ +V K+ K ++K+ +E+D R++ + E +T++ E
Sbjct: 2 IKYSIRGENLEVTEAIRDYVVSKLEK-IEKYFQADQELDARVNLKVYRE-----KTAKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
VT+ +RAE+ S+ Y SIDLV I+R++RK K K+ R
Sbjct: 56 VTI-PLGSITLRAEDISQDMYGSIDLVVDKIERQIRKNKTKIERKNR 101
[162][TOP]
>UniRef100_C6LIX7 Ribosomal subunit interface protein n=1 Tax=Bryantella
formatexigens DSM 14469 RepID=C6LIX7_9FIRM
Length = 176
Score = 57.0 bits (136), Expect = 1e-06
Identities = 37/113 (32%), Positives = 64/113 (56%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
++ I GKN+++T+ ++ V DK+GK ++++ EI V +S + E
Sbjct: 1 MRFTISGKNIEITEGLRTTVMDKLGK-LERYFTPDTEIIVTMSVE--------KERQKIE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFN 548
VT+ K + ++R+E+ S Y SIDLV +I+R+LRK K K+ +H +G N
Sbjct: 52 VTIPVKGN-IIRSEQVSNDMYVSIDLVEEVIERQLRKYKNKLI--AKHQEGSN 101
[163][TOP]
>UniRef100_B9MLV8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Anaerocellum thermophilum DSM 6725
RepID=B9MLV8_ANATD
Length = 181
Score = 56.6 bits (135), Expect = 1e-06
Identities = 35/108 (32%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+ II GKN+++TDA+K+ +E K+ K ++++ + ++ V LS E
Sbjct: 1 MNFIISGKNIEVTDALKERIEKKLSK-LERYIKLNTDVHVTLSVEKISHI--------VE 51
Query: 390 VTLFTKRHGVV-RAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
VT+ HG++ RAEE S Y++IDLV ++R++RK K K++ +
Sbjct: 52 VTI--PFHGMILRAEERSNDMYSAIDLVVDTLERQIRKFKTKIAKRAK 97
[164][TOP]
>UniRef100_C7XW84 Sigma 54 modulation protein/SSU ribosomal protein S30P n=1
Tax=Lactobacillus coleohominis 101-4-CHN
RepID=C7XW84_9LACO
Length = 179
Score = 56.6 bits (135), Expect = 1e-06
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVE---DKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTS 380
+K I+G+N+DLTDA++ +VE K+ K ++ + +++++ +T
Sbjct: 2 LKFNIRGENVDLTDAIRDYVEKRISKINKFLEDNVDATAHVNLKVYKN---------KTF 52
Query: 381 RCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
+ EVT+ + +RAEE S YASIDLV+ ++R++RK K KV+ R
Sbjct: 53 KVEVTI-PLPYLTLRAEETSNDMYASIDLVTDKLERQIRKYKTKVNRKSR 101
[165][TOP]
>UniRef100_C2LVK8 Ribosomal subunit interface protein n=1 Tax=Staphylococcus hominis
SK119 RepID=C2LVK8_STAHO
Length = 191
Score = 56.6 bits (135), Expect = 1e-06
Identities = 34/108 (31%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREI-DVRLSTRGGGEFGRGPRTSRC 386
++ I G NL +TDA++ ++E+K+GK + +++ + V++ T ++
Sbjct: 2 IRFEIHGDNLTITDAIRNYIEEKIGKLERYFNNVPNAVAHVKVKTYQNS-------ATKI 54
Query: 387 EVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
EVT+ K + +RAEE + YA IDLV+S ++R++RK K +V+ R
Sbjct: 55 EVTIPLK-NVTLRAEERHDDLYAGIDLVTSKLERQVRKYKTRVNRKNR 101
[166][TOP]
>UniRef100_A8S366 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC
BAA-613 RepID=A8S366_9CLOT
Length = 187
Score = 56.6 bits (135), Expect = 1e-06
Identities = 40/127 (31%), Positives = 69/127 (54%)
Frame = +3
Query: 186 SWDGPLSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGR 365
S + L ++ I G+N+++T +K VE K+GK ++ E+ V LS + +
Sbjct: 4 SQEKELMFMRYTITGRNIEVTPGLKAAVEKKIGK-LEHFFTPDTEVIVALSAQKDRQ--- 59
Query: 366 GPRTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGF 545
+ EVT+ K + +RAEE S Y SIDLV II+R++R+ ++K+ D + F
Sbjct: 60 -----KIEVTIPVKGN-TIRAEESSTDMYVSIDLVEEIIERQIRRYRKKLIDKKQAAISF 113
Query: 546 NRAKVRE 566
++A + E
Sbjct: 114 SQAFIEE 120
[167][TOP]
>UniRef100_Q5KV92 Ribosomal protein S30EA n=1 Tax=Geobacillus kaustophilus
RepID=Q5KV92_GEOKA
Length = 183
Score = 56.2 bits (134), Expect = 2e-06
Identities = 34/99 (34%), Positives = 66/99 (66%)
Frame = +3
Query: 222 IQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCEVTLF 401
++G+NL++T A++++VE K+GK ++++ ++ V ++ + + G+G + EVT+
Sbjct: 5 VRGENLEVTPALREYVEKKIGK-LERYFDGTEDVHVHVNLKVYND-GQG----KIEVTI- 57
Query: 402 TKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVS 518
H ++RAEE E YA+IDLV+ ++R++RK K KV+
Sbjct: 58 PMPHLLLRAEERHEDMYAAIDLVTDKLERQIRKHKTKVN 96
[168][TOP]
>UniRef100_C5EVT1 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium
1_7_47FAA RepID=C5EVT1_9FIRM
Length = 187
Score = 56.2 bits (134), Expect = 2e-06
Identities = 39/127 (30%), Positives = 69/127 (54%)
Frame = +3
Query: 186 SWDGPLSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGR 365
S + L ++ I G+N+++T +K VE K+GK ++ E+ V LS + +
Sbjct: 4 SQEKELMIMRYTITGRNIEVTPGLKAAVEKKIGK-LEHFFTPDTEVIVALSAQKDRQ--- 59
Query: 366 GPRTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGF 545
+ EVT+ K + +RAEE S Y SIDLV +I+R++R+ ++K+ D + F
Sbjct: 60 -----KIEVTIPVKGN-TIRAEESSTDMYVSIDLVEEVIERQIRRYRKKLIDKKQAAISF 113
Query: 546 NRAKVRE 566
++A + E
Sbjct: 114 SQAFIEE 120
[169][TOP]
>UniRef100_C0EWH6 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM
3353 RepID=C0EWH6_9FIRM
Length = 175
Score = 56.2 bits (134), Expect = 2e-06
Identities = 37/113 (32%), Positives = 60/113 (53%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
++ II GKNL++T+ +KQ V DK K ++K E+ V LS + + E
Sbjct: 1 MRYIIYGKNLEVTEGLKQAVHDKFSK-LEKFFTPETEVQVTLSVQKDNQI--------VE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFN 548
T+ K ++R E +S Y SID+ +++R +RK K K+S +G+ FN
Sbjct: 52 ATIPMKGT-ILRVEPNSTDMYVSIDMAVDLLERMIRKYKTKISKYGKGELKFN 103
[170][TOP]
>UniRef100_Q1WSW6 Ribosome-associated factor Y n=1 Tax=Lactobacillus salivarius
UCC118 RepID=Q1WSW6_LACS1
Length = 184
Score = 55.8 bits (133), Expect = 2e-06
Identities = 36/112 (32%), Positives = 69/112 (61%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K+ ++G+N+++T A++++VE ++ K ++K + ++ + + +T++ E
Sbjct: 2 LKINVRGENIEVTGAIREYVEKRLAK-LEKFFDNTADSTAHVNLKVYSD-----KTAKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGF 545
VT+ + V+RAEE S YASIDLV+ ++R++RK K KV+ R KGF
Sbjct: 56 VTI-PLPYLVLRAEETSPDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGF 105
[171][TOP]
>UniRef100_B5XMH0 Ribosomal subunit interface protein n=1 Tax=Streptococcus pyogenes
NZ131 RepID=B5XMH0_STRPZ
Length = 182
Score = 55.8 bits (133), Expect = 2e-06
Identities = 37/107 (34%), Positives = 65/107 (60%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K I+G+N+++T+A++ +VE K+ K ++K+ +EID R++ + E R+S+ E
Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFAKDQEIDARVNLKVYRE-----RSSKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
VT+ +RAE+ S Y SI LV I+R++RK K K++ R
Sbjct: 56 VTI-PLDSVTLRAEDVSXDMYGSIXLVVDKIERQIRKNKTKIAKKHR 101
[172][TOP]
>UniRef100_C4W9L5 Ribosomal subunit interface protein n=1 Tax=Staphylococcus warneri
L37603 RepID=C4W9L5_STAWA
Length = 191
Score = 55.8 bits (133), Expect = 2e-06
Identities = 31/104 (29%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREI-DVRLSTRGGGEFGRGPRTSRC 386
++ I G NL +TDA++ ++E+K+GK + +++ + V++ T T++
Sbjct: 2 IRFEIHGDNLTITDAIRNYIEEKIGKLERYFNNVPNAVAHVKVKTYSNS-------TTKV 54
Query: 387 EVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVS 518
EVT+ K +RAEE + YA +DL+++ ++R++RK K +V+
Sbjct: 55 EVTIPLK-DVTLRAEERHDDLYAGVDLITNKLERQVRKYKTRVN 97
[173][TOP]
>UniRef100_C2QJQ3 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Bacillus cereus R309803 RepID=C2QJQ3_BACCE
Length = 180
Score = 55.8 bits (133), Expect = 2e-06
Identities = 39/104 (37%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K I+G+N+++T A+K++VE K+GK ++++ EI V L + R E
Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLGK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51
Query: 390 VTL-FTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVS 518
VT+ FT ++RAEE + YA+IDLV I+R++RK K KV+
Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVN 93
[174][TOP]
>UniRef100_C6VLR5 Ribosomal protein S30EA n=3 Tax=Lactobacillus plantarum
RepID=C6VLR5_LACPJ
Length = 188
Score = 55.8 bits (133), Expect = 2e-06
Identities = 38/109 (34%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Frame = +3
Query: 222 IQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREI-DVRLSTRGGGEFGRGPRTSRCEVTL 398
I+G+N+++T A++ +V+ +VGK + + V I V L +T++ EVT+
Sbjct: 6 IRGENIEVTQAIRDYVQKRVGKLQKYFDNNVDSIAHVNLKVHPD-------KTAKVEVTI 58
Query: 399 FTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGF 545
+ V+RAEE S YAS+DLV+ ++R++RK K KV+ R KG+
Sbjct: 59 -PLPYLVLRAEETSPDMYASVDLVTDKLERQIRKYKTKVNRKSRE-KGY 105
[175][TOP]
>UniRef100_C2EGB2 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus
salivarius ATCC 11741 RepID=C2EGB2_9LACO
Length = 184
Score = 55.8 bits (133), Expect = 2e-06
Identities = 36/112 (32%), Positives = 69/112 (61%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K+ ++G+N+++T A++++VE ++ K ++K + ++ + + +T++ E
Sbjct: 2 LKINVRGENIEVTGAIREYVEKRLAK-LEKFFDNTADSTAHVNLKVYSD-----KTAKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGF 545
VT+ + V+RAEE S YASIDLV+ ++R++RK K KV+ R KGF
Sbjct: 56 VTI-PLPYLVLRAEETSPDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGF 105
[176][TOP]
>UniRef100_A8SVF0 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC
27759 RepID=A8SVF0_9FIRM
Length = 175
Score = 55.8 bits (133), Expect = 2e-06
Identities = 37/116 (31%), Positives = 65/116 (56%)
Frame = +3
Query: 219 IIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCEVTL 398
II GKN+++T+ ++ V+DK+ K ++K+ V S + + EVT+
Sbjct: 4 IISGKNIEVTEGLRNAVQDKLSK-LEKYFAADTGAQVTFSVEKDRQ--------KIEVTI 54
Query: 399 FTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRAKVRE 566
K H ++RAE+ S+ Y SIDLV +I+R++ K ++K+ D +++ N A V E
Sbjct: 55 PMKGH-IIRAEQVSDDMYVSIDLVVEVIERQVTKHRKKLIDKEQNVAYLNEAFVDE 109
[177][TOP]
>UniRef100_C8NB81 Sigma54 modulation protein n=1 Tax=Cardiobacterium hominis ATCC
15826 RepID=C8NB81_9GAMM
Length = 96
Score = 55.5 bits (132), Expect = 3e-06
Identities = 31/101 (30%), Positives = 54/101 (53%)
Frame = +3
Query: 222 IQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCEVTLF 401
I GK+LD++DAV+ +VE+K+GK + + + L +F E TL
Sbjct: 6 ITGKHLDISDAVRSYVEEKLGKLEIQQ---ITSAQITLRAENHLKFA--------EATLH 54
Query: 402 TKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDH 524
+ + E YA+IDL++ ++ +++RK KEK+S+H
Sbjct: 55 LASGKTIHGDASHEDMYAAIDLLADVLDKQIRKHKEKISEH 95
[178][TOP]
>UniRef100_C7ML59 Ribosomal subunit interface protein n=1 Tax=Cryptobacterium curtum
DSM 15641 RepID=C7ML59_CRYCD
Length = 188
Score = 55.5 bits (132), Expect = 3e-06
Identities = 33/105 (31%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKA--VQKHSHIVREIDVRLSTRGGGEFGRG-PRTS 380
+++ + G+ + +TDA+K + E+K+G + V ++ E+ + + E R R +
Sbjct: 1 MEISVTGRKMPVTDALKSYAEEKIGNSMKVMDIDPLIAEVILHV------EQNRAIARPA 54
Query: 381 RCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKV 515
CEVT+ K H ++R EE E YA+ID+ ++ + R+LRK K +V
Sbjct: 55 ICEVTMTAKGH-IIRVEEHEEDMYAAIDVAAAKVLRQLRKFKTRV 98
[179][TOP]
>UniRef100_C0GF81 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GF81_9FIRM
Length = 177
Score = 55.5 bits (132), Expect = 3e-06
Identities = 35/111 (31%), Positives = 63/111 (56%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+KLI++GKN+++T+A++++V ++GK + K+ + E V L+ G R E
Sbjct: 1 MKLILRGKNIEVTNALEEYVNKRIGK-IDKYFDVDTEAQVTLTVEHG--------MHRVE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKG 542
VT + ++RAEE + YASID V ++R++ K K +++ R G
Sbjct: 52 VTAAIEGM-ILRAEESTGDMYASIDSVVDKLERQIAKYKTRINRKARQGGG 101
[180][TOP]
>UniRef100_B9CQX8 Ribosomal subunit interface protein n=1 Tax=Staphylococcus capitis
SK14 RepID=B9CQX8_STACP
Length = 191
Score = 55.5 bits (132), Expect = 3e-06
Identities = 32/104 (30%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREI-DVRLSTRGGGEFGRGPRTSRC 386
++ I G NL +TDA++ ++EDK+GK + +++ + V++ T ++
Sbjct: 2 IRFEIHGDNLTITDAIRNYIEDKIGKLERYFNNVPNAVAHVKVKTYSNS-------ATKI 54
Query: 387 EVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVS 518
EVT+ K +RAEE + YA IDL++ ++R++RK K +V+
Sbjct: 55 EVTIPLK-DVTLRAEERHDDLYAGIDLITGKLERQVRKYKTRVN 97
[181][TOP]
>UniRef100_Q5HHR8 Uncharacterized protein SACOL0815 n=1 Tax=Staphylococcus aureus
subsp. aureus COL RepID=Y815_STAAC
Length = 190
Score = 55.5 bits (132), Expect = 3e-06
Identities = 31/108 (28%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREI-DVRLSTRGGGEFGRGPRTSRC 386
++ I G NL +TDA++ ++E+K+GK + + + + V++ T ++
Sbjct: 2 IRFEIHGDNLTITDAIRNYIEEKIGKLERYFNDVPNAVAHVKVKTYSNS-------ATKI 54
Query: 387 EVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
EVT+ K + +RAEE ++ YA IDL+++ ++R++RK K +++ R
Sbjct: 55 EVTIPLK-NVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRINRKSR 101
[182][TOP]
>UniRef100_Q2YSH7 Uncharacterized protein SAB0704 n=35 Tax=Staphylococcus aureus
RepID=Y704_STAAB
Length = 190
Score = 55.5 bits (132), Expect = 3e-06
Identities = 31/108 (28%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREI-DVRLSTRGGGEFGRGPRTSRC 386
++ I G NL +TDA++ ++E+K+GK + + + + V++ T ++
Sbjct: 2 IRFEIHGDNLTITDAIRNYIEEKIGKLERYFNDVPNAVAHVKVKTYSNS-------ATKI 54
Query: 387 EVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
EVT+ K + +RAEE ++ YA IDL+++ ++R++RK K +++ R
Sbjct: 55 EVTIPLK-NVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRINRKSR 101
[183][TOP]
>UniRef100_Q49VV1 Uncharacterized protein SSP1964 n=1 Tax=Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305
RepID=Y1964_STAS1
Length = 190
Score = 55.5 bits (132), Expect = 3e-06
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREI-DVRLSTRGGGEFGRGPRTSRC 386
++ I G+NL +TDA++ ++E+K+GK + + + V++ T ++
Sbjct: 2 IRFEIHGENLTITDAIRNYIEEKIGKLERYFNDVPNATAHVKVKTYQNS-------ATKI 54
Query: 387 EVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRH 533
EVT+ K+ +RAEE ++ YA IDL+++ ++R++RK K +V+ R+
Sbjct: 55 EVTIPLKKV-TLRAEERNDDLYAGIDLINNKLERQVRKYKTRVNRRNRN 102
[184][TOP]
>UniRef100_Q2B1U0 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. NRRL
B-14911 RepID=Q2B1U0_9BACI
Length = 184
Score = 55.1 bits (131), Expect = 4e-06
Identities = 33/99 (33%), Positives = 63/99 (63%)
Frame = +3
Query: 222 IQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCEVTLF 401
I+G+N+++T A++++VE K+ K ++K+ + +V ++ + S+ EVT+
Sbjct: 5 IRGENIEVTPAIREYVEKKIAK-LEKYFTETPDANVHVNLKTYNN-----NRSKVEVTI- 57
Query: 402 TKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVS 518
++ V+RAEED E YA+IDL+ ++R++RK K KV+
Sbjct: 58 PMQNLVLRAEEDHEDMYAAIDLIVDKLERQIRKHKTKVN 96
[185][TOP]
>UniRef100_D0BMS6 Ribosomal subunit interface protein n=1 Tax=Granulicatella elegans
ATCC 700633 RepID=D0BMS6_9LACT
Length = 182
Score = 55.1 bits (131), Expect = 4e-06
Identities = 38/112 (33%), Positives = 67/112 (59%)
Frame = +3
Query: 213 KLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCEV 392
K I+G+N+++T+A++ + E K+ K ++K+ V V ++ + E +T++ EV
Sbjct: 3 KYNIRGENIEVTEAIRNYAEKKLSK-LEKYFGDVANATVHVNLKVYTE-----KTAKVEV 56
Query: 393 TLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFN 548
T+ + V+RAEE S Y SIDLV ++R++RK K K++ R KGF+
Sbjct: 57 TI-PLPYLVLRAEETSGDLYGSIDLVIDKLERQVRKYKTKINRKSRE-KGFD 106
[186][TOP]
>UniRef100_C5NVZ2 Ribosome-associated factor Y n=1 Tax=Gemella haemolysans ATCC 10379
RepID=C5NVZ2_9BACL
Length = 181
Score = 55.1 bits (131), Expect = 4e-06
Identities = 35/109 (32%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Frame = +3
Query: 222 IQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCEVTLF 401
++G+NL++T A++++VE+KV K ++K+ E +V + + + ++ ++ +
Sbjct: 6 VRGENLEITQAIREYVENKVSK-LEKYFADSLEANVYANAKVY-------KNNKKKIEIT 57
Query: 402 TKRHGV-VRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGF 545
GV +RAEE +E YA++DLV ++R++RK K K++ GR KGF
Sbjct: 58 VPLRGVTLRAEETNEDLYAAVDLVVDKLERQMRKHKTKINRKGRE-KGF 105
[187][TOP]
>UniRef100_C9RVC1 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Geobacillus RepID=C9RVC1_9BACI
Length = 182
Score = 55.1 bits (131), Expect = 4e-06
Identities = 33/99 (33%), Positives = 67/99 (67%)
Frame = +3
Query: 222 IQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCEVTLF 401
++G+N+++T A++++VE K+GK ++++ +++V ++ + + G+G + EVT+
Sbjct: 5 VRGENIEVTPALREYVEKKIGK-LERYFDRTDDVNVHVNLKVYND-GQG----KIEVTIP 58
Query: 402 TKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVS 518
H ++RAEE E YA+IDLV+ ++R++RK K KV+
Sbjct: 59 IP-HLLLRAEERHEDMYAAIDLVTDKLERQIRKHKTKVN 96
[188][TOP]
>UniRef100_C0CVD1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme
DSM 15981 RepID=C0CVD1_9CLOT
Length = 176
Score = 55.1 bits (131), Expect = 4e-06
Identities = 37/119 (31%), Positives = 66/119 (55%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
++ I G+N+++T +K VE K+GK ++ E+ V LS + + + E
Sbjct: 1 MRYTITGRNIEVTPGLKAAVEKKIGK-LEHFFTPDTEVIVALSAQKDRQ--------KIE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRAKVRE 566
VT+ K + +RAEE S Y SIDLV +I+R++R+ ++K+ D + F++A + E
Sbjct: 52 VTIPVKGN-TIRAEESSTDMYVSIDLVEEVIERQIRRYRKKLIDKKQAALSFSQAFIDE 109
[189][TOP]
>UniRef100_P47995 Uncharacterized protein Sca_0400 n=1 Tax=Staphylococcus carnosus
subsp. carnosus TM300 RepID=Y400_STACT
Length = 188
Score = 55.1 bits (131), Expect = 4e-06
Identities = 32/104 (30%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVR-EIDVRLSTRGGGEFGRGPRTSRC 386
++ I G NL +TDA++ ++EDKVGK + +++ V++ T +++
Sbjct: 2 IRFEIHGDNLTITDAIRNYIEDKVGKLERYFTNVPNVNAHVKVKTYANS-------STKI 54
Query: 387 EVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVS 518
EVT+ +RAEE ++ YA IDL+++ ++R++RK K +V+
Sbjct: 55 EVTI-PLNDVTLRAEERNDDLYAGIDLITNKLERQVRKYKTRVN 97
[190][TOP]
>UniRef100_Q03SQ1 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Lactobacillus brevis ATCC 367 RepID=Q03SQ1_LACBA
Length = 186
Score = 54.7 bits (130), Expect = 5e-06
Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Frame = +3
Query: 222 IQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREI-DVRLSTRGGGEFGRGPRTSRCEVTL 398
I+G+N+++TDA++ +VE ++ K + + V I + L +T++ EVT+
Sbjct: 6 IRGENIEVTDAIRDYVEKRISKLEKYFDNNVEAIAHINLKVYQN-------KTAKVEVTI 58
Query: 399 FTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGF 545
+ +RAEE S YAS+DLV+ ++R++RK K KV+ R KG+
Sbjct: 59 -PLPYLTLRAEETSPDLYASVDLVTDKLERQIRKYKTKVNRKSRE-KGY 105
[191][TOP]
>UniRef100_Q03GZ9 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Pediococcus pentosaceus ATCC 25745
RepID=Q03GZ9_PEDPA
Length = 184
Score = 54.7 bits (130), Expect = 5e-06
Identities = 32/103 (31%), Positives = 64/103 (62%)
Frame = +3
Query: 222 IQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCEVTLF 401
++G+N+++T+A++ +VE ++GK ++K+ ++ + + +T++ EVT+
Sbjct: 6 VRGENIEVTEAIRDYVEKRIGK-IEKYFEQGANPKAHVNLKVYQD-----KTAKVEVTI- 58
Query: 402 TKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
+ V+RAEE S YAS+DLV+ ++R+LRK K K++ R
Sbjct: 59 PLPYLVLRAEETSPDLYASVDLVTDKLERQLRKYKTKINRKSR 101
[192][TOP]
>UniRef100_C1CWW9 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Deinococcus deserti VCD115 RepID=C1CWW9_DEIDV
Length = 188
Score = 54.7 bits (130), Expect = 5e-06
Identities = 30/97 (30%), Positives = 61/97 (62%)
Frame = +3
Query: 222 IQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCEVTLF 401
+ G+N++++DA++ +V++K+ + + +++ + + V L+ R + GR +R EV L
Sbjct: 6 LSGRNVEVSDAMRDYVQEKLTR-LDRYNDQITDARVTLTVRDVRDAGR---RNRVEVQLN 61
Query: 402 TKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEK 512
+G++RAEE YA+ID S +++R+LRK K +
Sbjct: 62 VP-NGIIRAEEHHSDMYAAIDKASDVLERQLRKFKTR 97
[193][TOP]
>UniRef100_C8PBU2 Ribosomal subunit interface protein n=1 Tax=Lactobacillus iners DSM
13335 RepID=C8PBU2_9LACO
Length = 185
Score = 54.7 bits (130), Expect = 5e-06
Identities = 32/107 (29%), Positives = 67/107 (62%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K ++G+N+++TDA+K +VE ++ K ++K+ I ++ ++ + E ++S+ E
Sbjct: 2 LKYNVRGENIEVTDALKSYVEKRLEK-LEKYFEIESDVIAHVNLKVYSE-----KSSKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
VT+ + V+RAE+ ++ Y SID VS ++R++RK K +++ R
Sbjct: 56 VTI-PLPYLVLRAEDTTDDMYKSIDFVSEKLERQIRKYKTRINRKSR 101
[194][TOP]
>UniRef100_UPI000196CE6C hypothetical protein CATMIT_02221 n=1 Tax=Catenibacterium mitsuokai
DSM 15897 RepID=UPI000196CE6C
Length = 193
Score = 54.3 bits (129), Expect = 6e-06
Identities = 33/110 (30%), Positives = 67/110 (60%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K+I++GKN+ +TDA++ + K+ + K+ + ++++ ++ R P + E
Sbjct: 16 MKVIVRGKNVTITDAIEDKITKKLA-LLDKYFIMGQDVEAKVLIR------TYPFGQKIE 68
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMK 539
VT+ T+ + ++RAEE S+ Y +IDLV ++R++RK K K+S ++ K
Sbjct: 69 VTIPTE-YVLLRAEETSDDLYEAIDLVIDKLERQIRKYKTKLSRKSKNNK 117
[195][TOP]
>UniRef100_A6WEN5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Kineococcus radiotolerans SRS30216
RepID=A6WEN5_KINRD
Length = 256
Score = 54.3 bits (129), Expect = 6e-06
Identities = 34/109 (31%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+++++ G++ D+ + ++HVEDK+ K VQ + + IDV LS + + R E
Sbjct: 1 MEVVVTGRHTDVKERFRRHVEDKLEKVVQ-FAPRAQRIDVELSHENNRR--QASSSERVE 57
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVS-DHGRH 533
+T+ K VVRAE ++ YA++DL ++ + +LR+ +++ HGRH
Sbjct: 58 ITVRDK-GPVVRAEACADDPYAALDLATTKLYERLRRSRDRRKVHHGRH 105
[196][TOP]
>UniRef100_C9LKZ3 Ribosomal subunit interface protein n=1 Tax=Dialister invisus DSM
15470 RepID=C9LKZ3_9FIRM
Length = 177
Score = 54.3 bits (129), Expect = 6e-06
Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
++L ++GKNL++T+A++ +VE GK +Q++ +I+V L T CE
Sbjct: 1 MELTVRGKNLEITEALRTYVEKHTGK-IQRYFDKPIKINVLLRISN--------MTKTCE 51
Query: 390 VTLFTKRHGVV-RAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRAKVRE 566
VT F GV+ R E S+ Y SIDLV ++R++ K K +++ + N+ V E
Sbjct: 52 VTAFV--DGVILRGVEKSDDMYKSIDLVFDKVERQIHKYKTRLAKRFKESNVLNKQFVSE 109
[197][TOP]
>UniRef100_C8NDQ1 Ribosomal subunit interface protein n=1 Tax=Granulicatella adiacens
ATCC 49175 RepID=C8NDQ1_9LACT
Length = 186
Score = 54.3 bits (129), Expect = 6e-06
Identities = 36/115 (31%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Frame = +3
Query: 213 KLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVRE---IDVRLSTRGGGEFGRGPRTSR 383
K I+G+N+++T+A++Q+ E K+ K + + + +++++ T +T++
Sbjct: 9 KYNIRGENIEVTEAIRQYAEKKISKLEKYFTDVANATAYVNLKVYTE---------KTAK 59
Query: 384 CEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFN 548
EVT+ + V+RAEE S Y SIDLV ++R++RK K K++ R KGF+
Sbjct: 60 VEVTI-PLPYLVLRAEETSIDLYGSIDLVVDKLERQVRKHKTKINRKSRE-KGFD 112
[198][TOP]
>UniRef100_C5QQC2 Ribosome-associated inhibitor protein Y n=1 Tax=Staphylococcus
epidermidis M23864:W1 RepID=C5QQC2_STAEP
Length = 191
Score = 54.3 bits (129), Expect = 6e-06
Identities = 31/104 (29%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREI-DVRLSTRGGGEFGRGPRTSRC 386
++ I G NL +TDA++ ++E+K+GK + +++ + V++ T ++
Sbjct: 2 IRFEIHGDNLTITDAIRNYIEEKIGKLERYFNNVPNAVAHVKVKTYSNS-------ATKI 54
Query: 387 EVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVS 518
EVT+ K +RAEE + YA IDL+++ ++R++RK K +V+
Sbjct: 55 EVTIPLK-DVTLRAEERHDDLYAGIDLITNKLERQVRKYKTRVN 97
[199][TOP]
>UniRef100_Q042C8 Sigma 54 modulation protein / SSU ribosomal protein S30P n=2
Tax=Lactobacillus gasseri RepID=Q042C8_LACGA
Length = 196
Score = 54.3 bits (129), Expect = 6e-06
Identities = 32/116 (27%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
Frame = +3
Query: 192 DGPLSSVKLIIQGKNLDLTDAVKQHVE---DKVGKAVQKHSHIVREIDVRLSTRGGGEFG 362
+G + +K ++G+N+++TDA++ +V+ DK+ K + +S ++ I++++
Sbjct: 11 EGESTMLKYNVRGENIEVTDALRDYVQKRLDKLEKYFEINSDVIAHINLKVYP------- 63
Query: 363 RGPRTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
T++ EVT+ + V+RAE+ ++ Y SID VS ++R++RK K +++ R
Sbjct: 64 --DHTAKVEVTI-PLPYLVLRAEDTTDDMYKSIDFVSEKLERQIRKYKTRINRKSR 116
[200][TOP]
>UniRef100_Q5WDF7 Ribosomal protein S30EA n=1 Tax=Bacillus clausii KSM-K16
RepID=Q5WDF7_BACSK
Length = 184
Score = 53.9 bits (128), Expect = 8e-06
Identities = 33/100 (33%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Frame = +3
Query: 222 IQGKNLDLTDAVKQHVEDKVGKAVQKHSHI-VREIDVRLSTRGGGEFGRGPRTSRCEVTL 398
I+G+N+++T A+++++E KVGK + +++V+L G GE S EVT+
Sbjct: 5 IRGENIEVTPAIREYIEKKVGKLERYFDTTPTADVNVKLQVLGSGE-------SSIEVTI 57
Query: 399 FTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVS 518
+ ++R EE + YA+ID+V ++R++RK K KV+
Sbjct: 58 PMPKL-LLRGEEINADMYAAIDIVVEKLERQIRKYKTKVN 96
[201][TOP]
>UniRef100_C7G8P2 Ribosomal subunit interface protein n=1 Tax=Roseburia intestinalis
L1-82 RepID=C7G8P2_9FIRM
Length = 176
Score = 53.9 bits (128), Expect = 8e-06
Identities = 34/102 (33%), Positives = 59/102 (57%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+++ I G+N++LTD +K VEDK+ K ++K+ ++ V LS + E
Sbjct: 1 MRIKITGRNIELTDGIKDAVEDKLNK-LEKYFTPDTDVYVTLSVE--------KERQKVE 51
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKV 515
VT+ K + +R+E+ S Y SIDLV +I+R+L+K + K+
Sbjct: 52 VTIPMKGN-YIRSEQVSNDMYVSIDLVEEVIERQLKKYRTKL 92
[202][TOP]
>UniRef100_C2ETD9 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus
vaginalis ATCC 49540 RepID=C2ETD9_9LACO
Length = 189
Score = 53.9 bits (128), Expect = 8e-06
Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Frame = +3
Query: 195 GPLSSVKLIIQGKNLDLTDAVKQHVEDKVGKAVQK--HSHIVREIDVRLSTRGGGEFGRG 368
G ++ +K I+G+N+++TD+++ +V ++ K +QK ++ V L
Sbjct: 6 GEITMLKFNIRGENIEVTDSIRDYVVKRINK-LQKFFEDNVEATAHVNLKVYPN------ 58
Query: 369 PRTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGF 545
RT + EVT+ + +RAEE S Y S+DLV+ ++R++RK K KV+ R KGF
Sbjct: 59 -RTYKVEVTI-PLPYLTLRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGF 114
[203][TOP]
>UniRef100_C2EM10 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus
ultunensis DSM 16047 RepID=C2EM10_9LACO
Length = 181
Score = 53.9 bits (128), Expect = 8e-06
Identities = 31/107 (28%), Positives = 68/107 (63%)
Frame = +3
Query: 210 VKLIIQGKNLDLTDAVKQHVEDKVGKAVQKHSHIVREIDVRLSTRGGGEFGRGPRTSRCE 389
+K ++G+N+++TDA++ +VE ++ K ++K+ + +++ ++ R + +++ E
Sbjct: 2 LKYNVRGENIEVTDALRSYVEKRLNK-LEKYFELSQDVIAHVNLRVYRD-----HSAKVE 55
Query: 390 VTLFTKRHGVVRAEEDSETTYASIDLVSSIIQRKLRKIKEKVSDHGR 530
VT+ + V+RAEE+++ Y SID VS ++R++RK K +V+ R
Sbjct: 56 VTI-PLPYLVLRAEENTDDMYRSIDFVSEKLERQIRKYKTRVNRKSR 101