[UP]
[1][TOP]
>UniRef100_Q99367 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99367_SOYBN
Length = 494
Score = 110 bits (276), Expect = 4e-23
Identities = 50/54 (92%), Positives = 53/54 (98%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTNDQDERG 227
YSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQT+D+D+ G
Sbjct: 439 YSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTSDKDDGG 492
Score = 57.0 bits (136), Expect = 6e-07
Identities = 29/48 (60%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSPSSP S SP YSP+SP +SP S GYSP+ PGYSP+S + Y+P +
Sbjct: 210 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPT-YSPSS 256
Score = 56.6 bits (135), Expect = 8e-07
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ PGYSP+S S Y+P
Sbjct: 329 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPS-YSP 373
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS+ GYSP+ P YSP+S S Y+P
Sbjct: 231 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS-YSP 275
Score = 55.1 bits (131), Expect = 2e-06
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SP +SP S GYSP+ P YSPSS Y+P
Sbjct: 217 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSP 261
Score = 54.3 bits (129), Expect = 4e-06
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 252 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 296
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 308 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 352
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 301 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 345
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 273 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPA-YSP 317
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 294 YSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPS-YSP 338
[2][TOP]
>UniRef100_Q99368 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99368_SOYBN
Length = 977
Score = 103 bits (257), Expect = 6e-21
Identities = 47/52 (90%), Positives = 50/52 (96%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTNDQDE 233
YSPSSPYNSGVSPDYSP+SPQFSPS GYSPSQPGYSPSSTSQ TPQT+D+DE
Sbjct: 926 YSPSSPYNSGVSPDYSPTSPQFSPSAGYSPSQPGYSPSSTSQDTPQTSDKDE 977
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS+ GYSP+ P YSP+S S Y+P
Sbjct: 745 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS-YSP 789
Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y PQ+
Sbjct: 836 YSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPS-YNPQS 882
Score = 55.5 bits (132), Expect = 2e-06
Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SP +SP S YSPS PGYSP+S + Y+P
Sbjct: 738 YSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSP 782
Score = 54.3 bits (129), Expect = 4e-06
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SP +SP S GYSP+ P YSPSS Y+P
Sbjct: 731 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSP 775
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 822 YSPTSPSYSLTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPS-YSP 866
[3][TOP]
>UniRef100_UPI0001985649 PREDICTED: similar to NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA
binding / DNA-directed RNA polymerase n=1 Tax=Vitis
vinifera RepID=UPI0001985649
Length = 1848
Score = 97.8 bits (242), Expect = 3e-19
Identities = 43/51 (84%), Positives = 48/51 (94%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTNDQD 236
YSP+SPYNSGVSPDYSPSSPQ+SPS GYSPS PGYSPSSTSQYTPQ +++D
Sbjct: 1793 YSPTSPYNSGVSPDYSPSSPQYSPSAGYSPSAPGYSPSSTSQYTPQMSNKD 1843
Score = 57.0 bits (136), Expect = 6e-07
Identities = 29/48 (60%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSPSSP S SP YSP+SP +SP S GYSP+ PGYSP+S + Y+P +
Sbjct: 1543 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPT-YSPSS 1589
Score = 56.6 bits (135), Expect = 8e-07
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ PGYSP+S S Y+P
Sbjct: 1683 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPS-YSP 1727
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS+ GYSP+ P YSP+S S Y+P
Sbjct: 1564 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS-YSP 1608
Score = 55.1 bits (131), Expect = 2e-06
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SP +SP S GYSP+ P YSPSS Y+P
Sbjct: 1550 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSP 1594
Score = 54.3 bits (129), Expect = 4e-06
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1585 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1629
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1592 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1636
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1599 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1643
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1641 YSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPS-YSP 1685
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1662 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1706
Score = 53.5 bits (127), Expect = 7e-06
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P Y+PSS ++Y+P
Sbjct: 1704 YSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSS-AKYSP 1748
[4][TOP]
>UniRef100_A7NVN8 Chromosome chr18 scaffold_1, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7NVN8_VITVI
Length = 89
Score = 97.8 bits (242), Expect = 3e-19
Identities = 43/51 (84%), Positives = 48/51 (94%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTNDQD 236
YSP+SPYNSGVSPDYSPSSPQ+SPS GYSPS PGYSPSSTSQYTPQ +++D
Sbjct: 34 YSPTSPYNSGVSPDYSPSSPQYSPSAGYSPSAPGYSPSSTSQYTPQMSNKD 84
[5][TOP]
>UniRef100_B9SXC0 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9SXC0_RICCO
Length = 1855
Score = 94.4 bits (233), Expect = 4e-18
Identities = 44/53 (83%), Positives = 48/53 (90%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTNDQDER 230
YSPSSPYNSGV PDYSPSSPQ+SPS GYSPS PGYSPSSTSQYT QT+ +D+R
Sbjct: 1786 YSPSSPYNSGVGPDYSPSSPQYSPSAGYSPSAPGYSPSSTSQYT-QTSTKDDR 1837
Score = 57.0 bits (136), Expect = 6e-07
Identities = 29/48 (60%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSPSSP S SP YSP+SP +SP S GYSP+ PGYSP+S + Y+P +
Sbjct: 1543 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPT-YSPSS 1589
Score = 56.6 bits (135), Expect = 8e-07
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ PGYSP+S S Y+P
Sbjct: 1676 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPS-YSP 1720
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS+ GYSP+ P YSP+S S Y+P
Sbjct: 1564 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS-YSP 1608
Score = 55.1 bits (131), Expect = 2e-06
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SP +SP S GYSP+ P YSPSS Y+P
Sbjct: 1550 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSP 1594
Score = 54.3 bits (129), Expect = 4e-06
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1585 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1629
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1592 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1636
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1599 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1643
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1655 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1699
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPS-YSP 1671
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1648 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1692
[6][TOP]
>UniRef100_Q6ZJR1 DNA-directed RNA polymerase largest chain-like protein n=1
Tax=Oryza sativa Japonica Group RepID=Q6ZJR1_ORYSJ
Length = 138
Score = 72.0 bits (175), Expect = 2e-11
Identities = 34/55 (61%), Positives = 43/55 (78%), Gaps = 3/55 (5%)
Frame = -3
Query: 388 YSPSSPYNS--GVSPDYSPSSPQFSPSTGYSPSQPGYSPSST-SQYTPQTNDQDE 233
YSP+SPY + G SPDYSP+SP +SPS YSP+ PGYSPSST Q++PQ D+D+
Sbjct: 80 YSPTSPYTTSGGPSPDYSPTSPNYSPSGSYSPTAPGYSPSSTGQQFSPQAADKDK 134
[7][TOP]
>UniRef100_B9FZ51 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9FZ51_ORYSJ
Length = 1526
Score = 72.0 bits (175), Expect = 2e-11
Identities = 34/55 (61%), Positives = 43/55 (78%), Gaps = 3/55 (5%)
Frame = -3
Query: 388 YSPSSPYNS--GVSPDYSPSSPQFSPSTGYSPSQPGYSPSST-SQYTPQTNDQDE 233
YSP+SPY + G SPDYSP+SP +SPS YSP+ PGYSPSST Q++PQ D+D+
Sbjct: 1468 YSPTSPYTTSGGPSPDYSPTSPNYSPSGSYSPTAPGYSPSSTGQQFSPQAADKDK 1522
Score = 55.1 bits (131), Expect = 2e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S GYSP+ P YSP+S + Y+P
Sbjct: 1368 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPN-YSP 1412
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1263 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1307
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1326 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1370
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1312 YSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPS-YSP 1356
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1347 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPA-YSP 1391
[8][TOP]
>UniRef100_Q56Z04 DNA-directed RNA polymerase II largest chain (Fragment) n=1
Tax=Arabidopsis thaliana RepID=Q56Z04_ARATH
Length = 99
Score = 71.2 bits (173), Expect = 3e-11
Identities = 33/53 (62%), Positives = 39/53 (73%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTNDQDER 230
YSPSSPY+SG SPDYSPS+ GYSP+ PGYSPSST QYTP D+ ++
Sbjct: 40 YSPSSPYSSGASPDYSPSA-------GYSPTLPGYSPSSTGQYTPHEGDKKDK 85
[9][TOP]
>UniRef100_P18616 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Arabidopsis
thaliana RepID=RPB1_ARATH
Length = 1840
Score = 71.2 bits (173), Expect = 3e-11
Identities = 33/53 (62%), Positives = 39/53 (73%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTNDQDER 230
YSPSSPY+SG SPDYSPS+ GYSP+ PGYSPSST QYTP D+ ++
Sbjct: 1781 YSPSSPYSSGASPDYSPSA-------GYSPTLPGYSPSSTGQYTPHEGDKKDK 1826
Score = 56.6 bits (135), Expect = 8e-07
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ PGYSP+S S Y+P
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPS-YSP 1715
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS+ GYSP+ P YSP+S S Y+P
Sbjct: 1559 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS-YSP 1603
Score = 55.1 bits (131), Expect = 2e-06
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SP +SP S GYSP+ P YSPSS Y+P
Sbjct: 1545 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSP 1589
Score = 54.3 bits (129), Expect = 4e-06
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1580 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1624
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1650 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1694
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPS-YSP 1666
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1643 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1687
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPA-YSP 1645
[10][TOP]
>UniRef100_C5YGY9 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5YGY9_SORBI
Length = 1857
Score = 68.2 bits (165), Expect = 3e-10
Identities = 33/54 (61%), Positives = 41/54 (75%), Gaps = 2/54 (3%)
Frame = -3
Query: 388 YSPSSPYNS--GVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTNDQDE 233
YSP+SP+N+ G SPDYSP+SP +SPS YSP+ PGYSPSST Q ND+D+
Sbjct: 1804 YSPTSPFNTSGGPSPDYSPTSPNYSPSGSYSPTAPGYSPSSTG----QGNDKDD 1853
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S GYSP+ P YSP+S S Y+P
Sbjct: 1704 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPS-YSP 1748
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1599 YSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1643
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1662 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1706
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1592 YSPTSPNYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1636
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1648 YSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPS-YSP 1692
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1683 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPA-YSP 1727
[11][TOP]
>UniRef100_Q30BD9 DNA-directed RNA polymerase n=1 Tax=Glaucocystis nostochinearum
RepID=Q30BD9_9EUKA
Length = 1852
Score = 60.5 bits (145), Expect = 6e-08
Identities = 33/52 (63%), Positives = 35/52 (67%), Gaps = 7/52 (13%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTS------QYTP 254
YSPSSP S SP YSPSSP +SPS+ YSPS P YSPSS S QYTP
Sbjct: 1735 YSPSSPSCSPASPTYSPSSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPQYTP 1786
Score = 55.5 bits (132), Expect = 2e-06
Identities = 30/48 (62%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSPSSP SP S YSPS P YSPSS S Y+P +
Sbjct: 1721 YSPTSPSYSPTSPSYSPSSPSCSPASPTYSPSSPSYSPSSPS-YSPSS 1767
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1665 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1709
Score = 53.9 bits (128), Expect = 5e-06
Identities = 28/53 (52%), Positives = 34/53 (64%), Gaps = 8/53 (15%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ PGYSP+S S Y+P
Sbjct: 1588 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPGYSPTSPS-YSP 1639
Score = 53.9 bits (128), Expect = 5e-06
Identities = 28/53 (52%), Positives = 35/53 (66%), Gaps = 8/53 (15%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP++SP S YSP+ PGYSP+S S Y+P
Sbjct: 1623 YSPTSPGYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPGYSPTSPS-YSP 1674
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1651 YSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1695
Score = 53.9 bits (128), Expect = 5e-06
Identities = 31/51 (60%), Positives = 34/51 (66%), Gaps = 6/51 (11%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSP-----SQPGYSPSSTSQYTP 254
YSPSSP S SP YSPSSPQ++P S YSP S P YSP TSQY+P
Sbjct: 1763 YSPSSPSYSPSSPSYSPSSPQYTPASANYSPPSPLHSSPAYSP--TSQYSP 1811
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1616 YSPTSPSYSPTSPGYSPTSPSYSPTSPRYSPTSPSYSPTSPS-YSP 1660
[12][TOP]
>UniRef100_Q9AXN0 DNA-directed RNA polymerase n=1 Tax=Glaucosphaera vacuolata
RepID=Q9AXN0_9RHOD
Length = 1746
Score = 60.1 bits (144), Expect = 8e-08
Identities = 29/40 (72%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSS 272
YSPSSP+ S SP YSPSSPQ+SPS+ YSPS P YSPSS
Sbjct: 1700 YSPSSPHYSPSSPQYSPSSPQYSPSSPAYSPSSPAYSPSS 1739
Score = 59.7 bits (143), Expect = 1e-07
Identities = 31/48 (64%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 248
YSPSSP+ S SP YSPSSP +SPS+ YSPS P YSPSS QY+P +
Sbjct: 1679 YSPSSPHYSPSSPQYSPSSPHYSPSSPHYSPSSPQYSPSS-PQYSPSS 1725
Score = 56.6 bits (135), Expect = 8e-07
Identities = 30/48 (62%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 248
YSPSSP S SP YSPSSP +SPS+ YSPS P YSPSS + Y+P +
Sbjct: 1686 YSPSSPQYSPSSPHYSPSSPHYSPSSPQYSPSSPQYSPSSPA-YSPSS 1732
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1599 YSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPT-YSP 1643
Score = 53.1 bits (126), Expect = 9e-06
Identities = 29/58 (50%), Positives = 35/58 (60%), Gaps = 11/58 (18%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-----------GYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP +SPS+ YSPS P YSPSS QY+P +
Sbjct: 1641 YSPTSPTYSPTSPTYSPTSPMYSPSSPAMSPARAGGVSYSPSSPHYSPSS-PQYSPSS 1697
[13][TOP]
>UniRef100_P35084 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Dictyostelium
discoideum RepID=RPB1_DICDI
Length = 1727
Score = 59.7 bits (143), Expect = 1e-07
Identities = 31/54 (57%), Positives = 38/54 (70%), Gaps = 4/54 (7%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSS---TSQYTPQTNDQ 239
YSP+SP S SP YSPSSP +SPS+ YSPS P YSPSS T++Y Q N++
Sbjct: 1672 YSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPTFTNKYNYQPNNK 1725
Score = 57.8 bits (138), Expect = 4e-07
Identities = 29/48 (60%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP +SPS+ YSPS P YSPSS S Y+P +
Sbjct: 1665 YSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPS-YSPSS 1711
Score = 57.0 bits (136), Expect = 6e-07
Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP +SP S YSPS P YSPSS S Y+P +
Sbjct: 1658 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPS-YSPSS 1704
Score = 56.2 bits (134), Expect = 1e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP+ S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1595 YSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1639
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1553 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1597
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1616 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1660
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1681
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1567 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPS-YSP 1611
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1574 YSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPS-YSP 1618
[14][TOP]
>UniRef100_A9TK89 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TK89_PHYPA
Length = 1646
Score = 58.9 bits (141), Expect = 2e-07
Identities = 30/46 (65%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S +SP YSP+SP +SP S GYSP+ PGYSP+S S Y+P
Sbjct: 1528 YSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPS-YSP 1572
Score = 58.2 bits (139), Expect = 3e-07
Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S GYSP+ PGYSP+S S Y+P
Sbjct: 1549 YSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPTSPS-YSP 1593
Score = 53.5 bits (127), Expect = 7e-06
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
+SPSSP S SP YSP SP +SP S GYSP+ PGYSP+S Y+P
Sbjct: 1521 FSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPG-YSP 1565
[15][TOP]
>UniRef100_A7S8F9 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
RepID=A7S8F9_NEMVE
Length = 1929
Score = 58.9 bits (141), Expect = 2e-07
Identities = 30/48 (62%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP +SP S YSPS P YSPSS S Y+PQ+
Sbjct: 1734 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPS-YSPQS 1780
Score = 57.0 bits (136), Expect = 6e-07
Identities = 27/48 (56%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP +SPS+ YSPS P YSP S S +P +
Sbjct: 1741 YSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQSPSYASPSS 1788
Score = 57.0 bits (136), Expect = 6e-07
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP Y+P+SP +SP S YSPS P YSPSS +YTP
Sbjct: 1819 YSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPSS-PRYTP 1863
Score = 55.8 bits (133), Expect = 1e-06
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSPS P YSP+S S YTP
Sbjct: 1791 YSPASPSYSPTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPS-YTP 1835
Score = 54.7 bits (130), Expect = 3e-06
Identities = 25/46 (54%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSPSSP +SPS+ YSP P Y+ S+ +Y+P
Sbjct: 1748 YSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQSPSYASPSSPKYSP 1793
Score = 54.7 bits (130), Expect = 3e-06
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSPSSP S SP Y+P+SPQ+SP S YSP+ P YSP +T YTP +
Sbjct: 1847 YSPSSPSYSPSSPRYTPTSPQYSPTSPKYSPASPNYSP-TTPSYTPMS 1893
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1629 YSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1694
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1757
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 3/48 (6%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQF---SPSTGYSPSQPGYSPSSTSQYTP 254
+ PSSP S SP YSP+SP + SPS+GYSP+ P YSP+S S Y+P
Sbjct: 1599 FMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPS-YSP 1645
Score = 53.5 bits (127), Expect = 7e-06
Identities = 26/46 (56%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SPS+ YSP+ P Y+P+S S Y+P
Sbjct: 1798 YSPTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPS-YSP 1842
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = -3
Query: 385 SPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
SPSSP S SP YSP+SP++SP S YSP+ P YSPSS +Y+P
Sbjct: 1785 SPSSPKYSPASPSYSPTSPKYSPTSPNYSPASPSYSPSS-PKYSP 1828
[16][TOP]
>UniRef100_C5DXL0 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DXL0_ZYGRC
Length = 1744
Score = 58.9 bits (141), Expect = 2e-07
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 7/63 (11%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS------TSQYTPQTNDQDER 230
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P + QD+R
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPGSPTYSPSSPKQDDR 1737
Query: 229 GQD 221
+D
Sbjct: 1738 EKD 1740
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1657 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1701
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1566 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1610
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1631
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1652
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1694
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFS-PSTGYSPSQPGYSPSSTSQYTP 254
+SPSSP S SP YSP+SP +S PS YSP+ P YSP+S S Y+P
Sbjct: 1538 FSPSSPTYSPTSPSYSPTSPSYSPPSPNYSPTSPSYSPTSPS-YSP 1582
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1552 YSPTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1596
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1545 YSPTSPSYSPTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1589
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1673
[17][TOP]
>UniRef100_A8PU11 DNA-directed RNA polymerase n=1 Tax=Brugia malayi RepID=A8PU11_BRUMA
Length = 1943
Score = 58.5 bits (140), Expect = 2e-07
Identities = 31/48 (64%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 248
YSPSSP S SP YSP+SP +SPS+ YSPS P YSPSS QYTP +
Sbjct: 1809 YSPSSPRYSPTSPTYSPTSPAYSPSSPQYSPSSPQYSPSS-PQYTPSS 1855
Score = 56.6 bits (135), Expect = 8e-07
Identities = 29/48 (60%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSPSSP++SP S YSP+ P YSPSS QY+P +
Sbjct: 1795 YSPTSPSYSPASPGYSPSSPRYSPTSPTYSPTSPAYSPSS-PQYSPSS 1841
Score = 56.6 bits (135), Expect = 8e-07
Identities = 32/51 (62%), Positives = 36/51 (70%), Gaps = 6/51 (11%)
Frame = -3
Query: 388 YSPSSPYNSGVS-----PDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 254
YSPSSP +G S P YSPSSPQ+SPS+ YSPS P YSPSS QY+P
Sbjct: 1892 YSPSSPGGAGTSYSRSSPQYSPSSPQYSPSSPQYSPSSPQYSPSS-PQYSP 1941
Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S GYSPS P YSP+S + Y+P
Sbjct: 1732 YSPTSPSYSPTSPSYSPTSPSYSPASPGYSPSSPRYSPTSPA-YSP 1776
Score = 55.8 bits (133), Expect = 1e-06
Identities = 31/53 (58%), Positives = 35/53 (66%), Gaps = 6/53 (11%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS------TGYSPSQPGYSPSSTSQYTPQT 248
YSPSSP S SP YSP+SPQ+SPS T YS S P YSPSS QY+P +
Sbjct: 1871 YSPSSPRYSPSSPQYSPTSPQYSPSSPGGAGTSYSRSSPQYSPSS-PQYSPSS 1922
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S GYSPS P YSP+S + Y+P
Sbjct: 1781 YSPTSPAYSPTSPTYSPTSPSYSPASPGYSPSSPRYSPTSPT-YSP 1825
Score = 55.1 bits (131), Expect = 2e-06
Identities = 29/54 (53%), Positives = 36/54 (66%), Gaps = 7/54 (12%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-------GYSPSQPGYSPSSTSQYTPQT 248
YSPSSP S SP YSPSSPQ++PS+ YSP+ P YSPSS +Y+P +
Sbjct: 1830 YSPSSPQYSPSSPQYSPSSPQYTPSSPAGDASPAYSPTSPQYSPSS-PRYSPSS 1882
Score = 53.9 bits (128), Expect = 5e-06
Identities = 28/53 (52%), Positives = 34/53 (64%), Gaps = 8/53 (15%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ PGYSP+S S Y+P
Sbjct: 1690 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPS-YSP 1741
Score = 53.5 bits (127), Expect = 7e-06
Identities = 28/53 (52%), Positives = 34/53 (64%), Gaps = 8/53 (15%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ PGYSPSS +Y+P
Sbjct: 1718 YSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPASPGYSPSS-PRYSP 1769
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSPSSP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1746 YSPTSPSYSPASPGYSPSSPRYSPTSPAYSPTSPTYSPTSPA-YSP 1790
Score = 53.5 bits (127), Expect = 7e-06
Identities = 28/47 (59%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQ 251
YSP+SP S SP YSPSSPQ+SP S YSPS PG + +S S+ +PQ
Sbjct: 1864 YSPTSPQYSPSSPRYSPSSPQYSPTSPQYSPSSPGGAGTSYSRSSPQ 1910
Score = 53.1 bits (126), Expect = 9e-06
Identities = 28/53 (52%), Positives = 34/53 (64%), Gaps = 8/53 (15%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ PGYSPSS +Y+P
Sbjct: 1767 YSPTSPAYSPTSPTYSPTSPAYSPTSPTYSPTSPSYSPASPGYSPSS-PRYSP 1818
[18][TOP]
>UniRef100_UPI00019270E9 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 2 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270E9
Length = 2014
Score = 58.2 bits (139), Expect = 3e-07
Identities = 30/46 (65%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSPSSPQ+SP S YSP P YSPSS S Y+P
Sbjct: 1734 YSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPS-YSP 1778
Score = 56.6 bits (135), Expect = 8e-07
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S GYSP+ P YSP+S S Y+P
Sbjct: 1594 YSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPS-YSP 1638
Score = 56.2 bits (134), Expect = 1e-06
Identities = 29/48 (60%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSPSSP S SP YSP+SP++SP S YSP+ P YSPSS S Y+P +
Sbjct: 1769 YSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPS-YSPSS 1815
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/48 (58%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP +SP S YSPS P YSP+S + Y+PQ+
Sbjct: 1720 YSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPA-YSPQS 1766
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1687
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1694
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1701
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP +SPS+ YSP+ P YSP S S Y+P +
Sbjct: 1727 YSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPS-YSPSS 1773
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSPSSP +SPS+ YSP+ P YSP+S + Y+P
Sbjct: 1790 YSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPT-YSP 1834
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1699 YSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPS-YSP 1743
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1811 YSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPA-YSP 1855
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/48 (56%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 248
YSP+S S SP+YSPSSP++SP+T YSP+ P YSP+S + Y+P T
Sbjct: 1895 YSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPT-YSPST 1941
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPS-YSP 1729
[19][TOP]
>UniRef100_UPI00019270BB PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 1 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270BB
Length = 2041
Score = 58.2 bits (139), Expect = 3e-07
Identities = 30/46 (65%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSPSSPQ+SP S YSP P YSPSS S Y+P
Sbjct: 1761 YSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPS-YSP 1805
Score = 56.6 bits (135), Expect = 8e-07
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S GYSP+ P YSP+S S Y+P
Sbjct: 1621 YSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPS-YSP 1665
Score = 56.2 bits (134), Expect = 1e-06
Identities = 29/48 (60%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSPSSP S SP YSP+SP++SP S YSP+ P YSPSS S Y+P +
Sbjct: 1796 YSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPS-YSPSS 1842
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/48 (58%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP +SP S YSPS P YSP+S + Y+PQ+
Sbjct: 1747 YSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPA-YSPQS 1793
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1693
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1714
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1721
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1728
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP +SPS+ YSP+ P YSP S S Y+P +
Sbjct: 1754 YSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPS-YSPSS 1800
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSPSSP +SPS+ YSP+ P YSP+S + Y+P
Sbjct: 1817 YSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPT-YSP 1861
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1642 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1686
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1726 YSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPS-YSP 1770
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1838 YSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPA-YSP 1882
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/48 (56%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 248
YSP+S S SP+YSPSSP++SP+T YSP+ P YSP+S + Y+P T
Sbjct: 1922 YSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPT-YSPST 1968
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPS-YSP 1756
[20][TOP]
>UniRef100_C5Y387 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5Y387_SORBI
Length = 1874
Score = 58.2 bits (139), Expect = 3e-07
Identities = 29/53 (54%), Positives = 36/53 (67%), Gaps = 8/53 (15%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTP 254
YSP+SP+ S SP YSPSSP +SP S GYSP+ PGYSP+S + Y+P
Sbjct: 1708 YSPTSPFYSPTSPSYSPSSPSYSPTSPTYSPTSLGYSPTSPGYSPTSPT-YSP 1759
[21][TOP]
>UniRef100_O96446 DNA-directed RNA polymerase n=1 Tax=Vairimorpha necatrix
RepID=O96446_9MICR
Length = 1605
Score = 58.2 bits (139), Expect = 3e-07
Identities = 31/54 (57%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQDER 230
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P T D DE+
Sbjct: 1544 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP-TYDNDEK 1595
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1502 YSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1546
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1523 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1567
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1495 YSPTSPTYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1539
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1488 YSPTSPTYSPTSPTYSPTSPTYSPTSPSYSPTSPSYSPTSPS-YSP 1532
[22][TOP]
>UniRef100_C8Z6G2 Rpo21p n=1 Tax=Saccharomyces cerevisiae EC1118 RepID=C8Z6G2_YEAST
Length = 1733
Score = 58.2 bits (139), Expect = 3e-07
Identities = 28/51 (54%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQ 239
YSP+SP S SP YSP+SP +SP S YSP+ PGYSP S + Y+P+ ++Q
Sbjct: 1675 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPA-YSPKQDEQ 1724
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1549 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1593
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1614
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1591 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1635
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1656
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1633 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPS-YSP 1677
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1654 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1698
[23][TOP]
>UniRef100_C7GKZ2 Rpo21p n=2 Tax=Saccharomyces cerevisiae RepID=C7GKZ2_YEAS2
Length = 1733
Score = 58.2 bits (139), Expect = 3e-07
Identities = 28/51 (54%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQ 239
YSP+SP S SP YSP+SP +SP S YSP+ PGYSP S + Y+P+ ++Q
Sbjct: 1675 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPA-YSPKQDEQ 1724
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1549 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1593
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1614
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1591 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1635
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1656
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1633 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPS-YSP 1677
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1654 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1698
[24][TOP]
>UniRef100_B3LH31 DNA-directed RNA polymerase n=1 Tax=Saccharomyces cerevisiae RM11-1a
RepID=B3LH31_YEAS1
Length = 1733
Score = 58.2 bits (139), Expect = 3e-07
Identities = 28/51 (54%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQ 239
YSP+SP S SP YSP+SP +SP S YSP+ PGYSP S + Y+P+ ++Q
Sbjct: 1675 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPA-YSPKQDEQ 1724
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1549 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1593
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1614
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1591 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1635
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1656
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1633 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPS-YSP 1677
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1654 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1698
[25][TOP]
>UniRef100_P04050 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Saccharomyces
cerevisiae RepID=RPB1_YEAST
Length = 1733
Score = 58.2 bits (139), Expect = 3e-07
Identities = 28/51 (54%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQ 239
YSP+SP S SP YSP+SP +SP S YSP+ PGYSP S + Y+P+ ++Q
Sbjct: 1675 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPA-YSPKQDEQ 1724
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1549 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1593
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1614
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1591 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1635
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1656
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1633 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPS-YSP 1677
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1654 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1698
[26][TOP]
>UniRef100_A5DCV3 DNA-directed RNA polymerase II subunit RPB1 (Fragments) n=1
Tax=Pichia guilliermondii RepID=RPB1_PICGU
Length = 1579
Score = 58.2 bits (139), Expect = 3e-07
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 7/62 (11%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS------TSQYTPQTNDQDER 230
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S + Y+P ND ++
Sbjct: 1518 YSPTSPSYSPTSPSYSPTSPQYSPTSPAYSPTSPQYSPNSPQYSPRSPLYSPDQNDDKDK 1577
Query: 229 GQ 224
Q
Sbjct: 1578 KQ 1579
Score = 55.1 bits (131), Expect = 2e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 1497 YSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS-PQYSP 1541
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1385 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1429
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1406 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1450
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1427 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1471
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1448 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1492
[27][TOP]
>UniRef100_UPI000186501C hypothetical protein BRAFLDRAFT_115025 n=1 Tax=Branchiostoma floridae
RepID=UPI000186501C
Length = 1956
Score = 57.8 bits (138), Expect = 4e-07
Identities = 28/47 (59%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQ 251
YSP+SP S SP YSPSSP +SP S YSPS P YSPSS + +P+
Sbjct: 1769 YSPASPSYSPTSPSYSPSSPNYSPQSPSYSPSSPSYSPSSPNPSSPK 1815
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP +SPS+ YSP P YSPSS S Y+P +
Sbjct: 1762 YSPTSPSYSPASPSYSPTSPSYSPSSPNYSPQSPSYSPSSPS-YSPSS 1808
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/48 (58%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP +SP S YSPS P YSP S S Y+P +
Sbjct: 1755 YSPTSPSYSPTSPSYSPASPSYSPTSPSYSPSSPNYSPQSPS-YSPSS 1801
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1622 YSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + YTP
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YTP 1750
Score = 54.7 bits (130), Expect = 3e-06
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQ---FSPST-GYSPSQPGYSPSSTSQYTPQTNDQDE 233
YSP+SP S SP YSP+SP+ +SP+T GYSP+ P YSP S Q ++DE
Sbjct: 1900 YSPTSPKYSPTSPTYSPTSPKGSTYSPTTPGYSPASPTYSPESPESRATQEEEEDE 1955
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 YSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1687
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1708
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1729
Score = 53.9 bits (128), Expect = 5e-06
Identities = 26/46 (56%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+Y+P+SP++SP S YSP+ P YSP+S S Y+P
Sbjct: 1734 YSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPS-YSP 1778
[28][TOP]
>UniRef100_Q6CBQ3 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6CBQ3_YARLI
Length = 1750
Score = 57.8 bits (138), Expect = 4e-07
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Frame = -3
Query: 388 YSPSSP-YNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQDER 230
YSPSSP +N+G S YSP+SP +SP S YSP+ P YSP+S S Y+P + D ++
Sbjct: 1694 YSPSSPKFNAGASTSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPGSGDSKDK 1747
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1591 YSPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1635
Score = 54.7 bits (130), Expect = 3e-06
Identities = 28/47 (59%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFS--PSTGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSPSSP+F+ ST YSP+ P YSP+S S Y+P
Sbjct: 1680 YSPTSPSYSPTSPSYSPSSPKFNAGASTSYSPTSPSYSPTSPS-YSP 1725
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
+SPSSP + SP YSPSSP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1577 FSPSSPAFAATSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1621
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1656
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/51 (52%), Positives = 34/51 (66%), Gaps = 6/51 (11%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS------TGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP+ T YSP+ P YSP+S S Y+P
Sbjct: 1633 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSYSPTSPSYSPTSPS-YSP 1682
[29][TOP]
>UniRef100_Q75A34 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Eremothecium
gossypii RepID=RPB1_ASHGO
Length = 1745
Score = 57.8 bits (138), Expect = 4e-07
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 7/63 (11%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS------TSQYTPQTNDQDER 230
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P N+ D+
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPRSPSYSPSFNNNDKE 1737
Query: 229 GQD 221
+D
Sbjct: 1738 QKD 1740
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1552 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1596
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1573 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1617
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1594 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1638
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1680
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1701
[30][TOP]
>UniRef100_UPI0000D5670C PREDICTED: similar to GA13798-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D5670C
Length = 2007
Score = 57.4 bits (137), Expect = 5e-07
Identities = 31/55 (56%), Positives = 37/55 (67%), Gaps = 8/55 (14%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP--STGYSPSQPGYSPSSTS------QYTPQT 248
YSP+SP S SP+YSPSSPQ +P S+ YSPS P YSPSS S QY+P +
Sbjct: 1802 YSPTSPSYSPTSPNYSPSSPQHTPAASSRYSPSSPNYSPSSPSYSPTSPQYSPHS 1856
Score = 57.0 bits (136), Expect = 6e-07
Identities = 25/48 (52%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP +G SP YSP+SP +SP S YSPS P ++P+++S+Y+P +
Sbjct: 1788 YSPTSPSFAGGSPQYSPTSPSYSPTSPNYSPSSPQHTPAASSRYSPSS 1835
Score = 56.2 bits (134), Expect = 1e-06
Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SPQ+SP ST YSP+ P Y+P+S S Y+P
Sbjct: 1831 YSPSSPNYSPSSPSYSPTSPQYSPHSTKYSPTSPTYTPTSPS-YSP 1875
Score = 55.1 bits (131), Expect = 2e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
Y+P+SP S SP YSPSSPQ+SP S +SPS P YSP+S S Y+P
Sbjct: 1746 YTPASPSYSPTSPSYSPSSPQYSPASPSFSPSSPKYSPTSPS-YSP 1790
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1606 YSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1650
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1671
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1648 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1692
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1669 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1713
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1690 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1734
Score = 53.9 bits (128), Expect = 5e-06
Identities = 28/53 (52%), Positives = 34/53 (64%), Gaps = 8/53 (15%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST--------GYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS+ YSP+ P YSPSS QY+P
Sbjct: 1718 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPASPSYSPTSPSYSPSS-PQYSP 1769
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSPS P Y+P+S S Y+P
Sbjct: 1711 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPASPS-YSP 1755
[31][TOP]
>UniRef100_UPI0000546D90 PREDICTED: im:7136071 isoform 1 n=1 Tax=Danio rerio
RepID=UPI0000546D90
Length = 1972
Score = 57.4 bits (137), Expect = 5e-07
Identities = 28/48 (58%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP+Y+P+SP +SP S YSP+ P YSPSS +YTPQ+
Sbjct: 1773 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPSS-PRYTPQS 1819
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1626 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1670
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1663
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1647 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1691
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1668 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1712
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1689 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1733
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1710 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1754
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS----TGYSPSQPGYSPSSTSQYTPQTNDQD 236
YSP+SP S SP YSP+SP +SP+ + YSP+ PGYSP+S + Y+P + D
Sbjct: 1913 YSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPT-YSPAISPDD 1966
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP+T YSP+ P YSP+S + YTP
Sbjct: 1864 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPT-YTP 1908
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S Y+P+ P YSP+S S Y+P
Sbjct: 1731 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPSYSPTSPS-YSP 1775
[32][TOP]
>UniRef100_A9U396 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9U396_PHYPA
Length = 1742
Score = 57.4 bits (137), Expect = 5e-07
Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S +SP YSP+SP +SP S GYSP+ PGYSP+S Y+P
Sbjct: 1543 YSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPG-YSP 1587
Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP + SP YSP+SP +SP S GYSP+ P YSPSS S Y+P
Sbjct: 1662 YSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPTSPSYSPSSPS-YSP 1706
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S GYSP+ P YSP+S S Y P
Sbjct: 1571 YSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPS-YAP 1615
Score = 55.1 bits (131), Expect = 2e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ PGYSP+S S Y+P
Sbjct: 1564 YSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPS-YSP 1608
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/42 (64%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 266
YSPSSP S SP YSP+SP +SP S YSPS P YSP+S S
Sbjct: 1697 YSPSSPSYSPTSPSYSPTSPAYSPTSPRYSPSSPSYSPTSPS 1738
Score = 53.5 bits (127), Expect = 7e-06
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
+SPSSP S SP YSP SP +SP S GYSP+ PGYSP+S Y+P
Sbjct: 1536 FSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPG-YSP 1580
Score = 53.5 bits (127), Expect = 7e-06
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS+ YSP+ P YSP+S + Y+P
Sbjct: 1676 YSPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSPSYSPTSPA-YSP 1720
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1606 YSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1650
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPA-YSP 1664
[33][TOP]
>UniRef100_Q9XZU9 DNA-directed RNA polymerase n=1 Tax=Drosophila subobscura
RepID=Q9XZU9_DROSU
Length = 1889
Score = 57.4 bits (137), Expect = 5e-07
Identities = 30/48 (62%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSPSSP +SP S YSPS P YSP+S + YTP T
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPN-YTPAT 1726
[34][TOP]
>UniRef100_Q9XZS2 DNA-directed RNA polymerase n=1 Tax=Drosophila madeirensis
RepID=Q9XZS2_DROMD
Length = 1889
Score = 57.4 bits (137), Expect = 5e-07
Identities = 30/48 (62%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSPSSP +SP S YSPS P YSP+S + YTP T
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPN-YTPAT 1726
[35][TOP]
>UniRef100_B0XAQ9 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
RepID=B0XAQ9_CULQU
Length = 1874
Score = 57.4 bits (137), Expect = 5e-07
Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1661 YSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPN-YTPAT 1707
Score = 57.0 bits (136), Expect = 6e-07
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 5/50 (10%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS-----TSQYTP 254
YSP+SP S SP YSP+SP +SP+ Y+PS P YSP+S TS Y+P
Sbjct: 1607 YSPTSPNYSPTSPSYSPTSPLYSPTATYAPSSPAYSPTSPSYSPTSPYSP 1656
Score = 55.1 bits (131), Expect = 2e-06
Identities = 27/46 (58%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP++SP S YSP+ P YSP+S S Y+P
Sbjct: 1579 YSPTSPSYSPTSPNYSPTSPRYSPTSPNYSPTSPNYSPTSPS-YSP 1623
Score = 54.7 bits (130), Expect = 3e-06
Identities = 28/46 (60%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP+ S SP YSPSSP++SP S YSP+ P Y S QYTP
Sbjct: 1717 YSPSSPHYSPTSPSYSPSSPKYSPTSPSYSPTSPSYGGS--PQYTP 1760
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/48 (54%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP+Y+P++P +SP S YSPS P YSP+S S Y+P +
Sbjct: 1689 YSPTSPSYSPTSPNYTPATPSYSPTSPNYSPSSPHYSPTSPS-YSPSS 1735
[36][TOP]
>UniRef100_B6JYP8 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6JYP8_SCHJY
Length = 1748
Score = 57.4 bits (137), Expect = 5e-07
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQDERGQ 224
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P + Q+ +G+
Sbjct: 1660 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPGHSAQNAQGR 1714
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1555 YSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1599
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1576 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1620
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1597 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1641
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1618 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1662
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1639 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1683
[37][TOP]
>UniRef100_Q4QZ03 DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum tuberosum
RepID=Q4QZ03_SOLTU
Length = 361
Score = 57.0 bits (136), Expect = 6e-07
Identities = 29/48 (60%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSPSSP S SP YSP+SP +SP S GYSP+ PGYSP+S + Y+P +
Sbjct: 123 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPT-YSPSS 169
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS+ GYSP+ P YSP+S S Y+P
Sbjct: 144 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS-YSP 188
Score = 55.5 bits (132), Expect = 2e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP+ YSP+ PGYSP+S S Y+P
Sbjct: 249 YSPTSPSYSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPTSPS-YSP 293
Score = 55.1 bits (131), Expect = 2e-06
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SP +SP S GYSP+ P YSPSS Y+P
Sbjct: 130 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSP 174
[38][TOP]
>UniRef100_A7NVN7 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
RepID=A7NVN7_VITVI
Length = 1010
Score = 57.0 bits (136), Expect = 6e-07
Identities = 29/48 (60%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSPSSP S SP YSP+SP +SP S GYSP+ PGYSP+S + Y+P +
Sbjct: 780 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPT-YSPSS 826
Score = 56.6 bits (135), Expect = 8e-07
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ PGYSP+S S Y+P
Sbjct: 920 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPS-YSP 964
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS+ GYSP+ P YSP+S S Y+P
Sbjct: 801 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS-YSP 845
Score = 55.1 bits (131), Expect = 2e-06
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SP +SP S GYSP+ P YSPSS Y+P
Sbjct: 787 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSP 831
Score = 54.3 bits (129), Expect = 4e-06
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 822 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 866
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 829 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 873
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 836 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 880
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 878 YSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPS-YSP 922
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 899 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 943
Score = 53.5 bits (127), Expect = 7e-06
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P Y+PSS ++Y+P
Sbjct: 941 YSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSS-AKYSP 985
[39][TOP]
>UniRef100_Q7Q3C6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7Q3C6_ANOGA
Length = 1878
Score = 57.0 bits (136), Expect = 6e-07
Identities = 30/46 (65%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSPSSP FSP S YSPS P YSP+S S Y+P
Sbjct: 1651 YSPTSPSYSPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSPS-YSP 1695
Score = 56.6 bits (135), Expect = 8e-07
Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSPSSP S SP YSPSSP +SP S YSP+ P YSP+S + +TP T
Sbjct: 1665 YSPSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPN-FTPVT 1711
Score = 54.7 bits (130), Expect = 3e-06
Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQ--YTPQTNDQDERGQD 221
YSPSSP S SP Y+ SSP +SPS+ YSP+ GYSPSS + Y+P + D+ +D
Sbjct: 1820 YSPSSPKYSPTSPVYTSSSPTYSPSSPAYSPTPQGYSPSSPASPTYSPTSPSYDDSNED 1878
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP + V+P YSPSSP +SP S YSP+ P YSPSS +Y+P
Sbjct: 1700 YSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPSYSPSS-PKYSP 1744
[40][TOP]
>UniRef100_UPI0000E48673 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 1 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48673
Length = 1880
Score = 56.6 bits (135), Expect = 8e-07
Identities = 28/48 (58%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP +SPS+ YSP+ P YSP+S S Y+PQ+
Sbjct: 1696 YSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPS-YSPQS 1742
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSPSSP++SP S YSP+ P YSP S S Y+P
Sbjct: 1703 YSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPS-YSP 1747
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/48 (56%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP FSPS+ YSP+ P YSP+S +Y+P +
Sbjct: 1759 YSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTS-PKYSPSS 1805
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1584 YSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1628
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1649
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1626 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1670
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1647 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1691
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1668 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1712
Score = 54.3 bits (129), Expect = 4e-06
Identities = 28/46 (60%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP SP +SP S YSPS P YSP+S S Y+P
Sbjct: 1724 YSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPS-YSP 1768
Score = 54.3 bits (129), Expect = 4e-06
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SP +SP S +SPS P YSP+S S Y+P
Sbjct: 1752 YSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPS-YSP 1796
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1570 YSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPS-YSP 1614
Score = 53.5 bits (127), Expect = 7e-06
Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS----TGYSPSQPGYSPSST--SQYTPQTNDQDE 233
YSP+SP S SP YSPSSP +SP+ + YSP+ P YSP+S S +P D DE
Sbjct: 1822 YSPASPTYSPTSPKYSPSSPTYSPTSPKGSTYSPTSPSYSPTSPSYSPTSPGMGDDDE 1879
[41][TOP]
>UniRef100_UPI0000E48672 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 2 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48672
Length = 1913
Score = 56.6 bits (135), Expect = 8e-07
Identities = 28/48 (58%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP +SPS+ YSP+ P YSP+S S Y+PQ+
Sbjct: 1729 YSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPS-YSPQS 1775
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSPSSP++SP S YSP+ P YSP S S Y+P
Sbjct: 1736 YSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPS-YSP 1780
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/48 (56%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP FSPS+ YSP+ P YSP+S +Y+P +
Sbjct: 1792 YSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTS-PKYSPSS 1838
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1617 YSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1661
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1638 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1682
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1659 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1703
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1680 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1724
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1701 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1745
Score = 54.3 bits (129), Expect = 4e-06
Identities = 28/46 (60%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP SP +SP S YSPS P YSP+S S Y+P
Sbjct: 1757 YSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPS-YSP 1801
Score = 54.3 bits (129), Expect = 4e-06
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SP +SP S +SPS P YSP+S S Y+P
Sbjct: 1785 YSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPS-YSP 1829
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1603 YSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPS-YSP 1647
Score = 53.5 bits (127), Expect = 7e-06
Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS----TGYSPSQPGYSPSST--SQYTPQTNDQDE 233
YSP+SP S SP YSPSSP +SP+ + YSP+ P YSP+S S +P D DE
Sbjct: 1855 YSPASPTYSPTSPKYSPSSPTYSPTSPKGSTYSPTSPSYSPTSPSYSPTSPGMGDDDE 1912
[42][TOP]
>UniRef100_UPI0000E48671 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 3 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48671
Length = 1921
Score = 56.6 bits (135), Expect = 8e-07
Identities = 28/48 (58%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP +SPS+ YSP+ P YSP+S S Y+PQ+
Sbjct: 1737 YSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPS-YSPQS 1783
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSPSSP++SP S YSP+ P YSP S S Y+P
Sbjct: 1744 YSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPS-YSP 1788
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/48 (56%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP FSPS+ YSP+ P YSP+S +Y+P +
Sbjct: 1800 YSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTS-PKYSPSS 1846
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1625 YSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1669
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1690
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1667 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1711
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1688 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1732
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1709 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1753
Score = 54.3 bits (129), Expect = 4e-06
Identities = 28/46 (60%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP SP +SP S YSPS P YSP+S S Y+P
Sbjct: 1765 YSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPS-YSP 1809
Score = 54.3 bits (129), Expect = 4e-06
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SP +SP S +SPS P YSP+S S Y+P
Sbjct: 1793 YSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPS-YSP 1837
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1611 YSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPS-YSP 1655
Score = 53.5 bits (127), Expect = 7e-06
Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS----TGYSPSQPGYSPSST--SQYTPQTNDQDE 233
YSP+SP S SP YSPSSP +SP+ + YSP+ P YSP+S S +P D DE
Sbjct: 1863 YSPASPTYSPTSPKYSPSSPTYSPTSPKGSTYSPTSPSYSPTSPSYSPTSPGMGDDDE 1920
[43][TOP]
>UniRef100_UPI000051AA8E PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) n=1 Tax=Apis mellifera
RepID=UPI000051AA8E
Length = 452
Score = 56.6 bits (135), Expect = 8e-07
Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
Y+P+SP S SP YSPSSPQ+SP S YSPS P YSP+S S Y+P
Sbjct: 286 YTPASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPS-YSP 330
Score = 56.6 bits (135), Expect = 8e-07
Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SPQ+SP ST YSP+ P Y+P+S S Y+P
Sbjct: 378 YSPSSPNYSPTSPTYSPTSPQYSPSSTKYSPTSPTYTPTSPS-YSP 422
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 153 YSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 197
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P +
Sbjct: 237 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPSS 283
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 174 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 218
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 195 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 239
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 216 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 260
Score = 54.3 bits (129), Expect = 4e-06
Identities = 26/48 (54%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP +SPS+ Y+P+ P YSP+S S Y+P +
Sbjct: 258 YSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPS-YSPSS 304
Score = 53.9 bits (128), Expect = 5e-06
Identities = 30/55 (54%), Positives = 35/55 (63%), Gaps = 8/55 (14%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQF--SPSTGYSPSQPGYSPSS------TSQYTPQT 248
YSP+SP S SP YSPSSPQ S ST YSPS P YSP+S + QY+P +
Sbjct: 349 YSPTSPTYSPTSPSYSPSSPQHTASGSTRYSPSSPNYSPTSPTYSPTSPQYSPSS 403
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSPSSP++SP S YSP+ P ++ +S QYTP
Sbjct: 300 YSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGTS-PQYTP 344
[44][TOP]
>UniRef100_Q99366 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99366_SOYBN
Length = 625
Score = 56.6 bits (135), Expect = 8e-07
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ PGYSP+S S Y+P
Sbjct: 489 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPS-YSP 533
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS+ GYSP+ P YSP+S S Y+P
Sbjct: 384 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS-YSP 428
Score = 55.5 bits (132), Expect = 2e-06
Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SP +SP S YSPS PGYSP+S + Y+P
Sbjct: 377 YSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSP 421
Score = 54.3 bits (129), Expect = 4e-06
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SP +SP S GYSP+ P YSPSS Y+P
Sbjct: 370 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSP 414
Score = 54.3 bits (129), Expect = 4e-06
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 405 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 449
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 468 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 512
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 461 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 505
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 426 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPA-YSP 470
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 447 YSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPS-YSP 491
[45][TOP]
>UniRef100_O00820 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acanthamoeba
castellanii RepID=O00820_ACACA
Length = 1569
Score = 56.6 bits (135), Expect = 8e-07
Identities = 30/46 (65%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSPSSP +SP S GYSPS P YSP+S +Y+P
Sbjct: 1482 YSPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTS-PKYSP 1526
Score = 55.1 bits (131), Expect = 2e-06
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSPS P YSP+S S Y+P
Sbjct: 1517 YSPTSPKYSPASPSYSPTSPAYSPTSPSYSPSSPSYSPTSPS-YSP 1561
Score = 54.7 bits (130), Expect = 3e-06
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S YSPSSP +SPS+ GYSPS PGYSP+S Y+P +
Sbjct: 1468 YSPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPGYSPASPG-YSPSS 1514
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS+ YSP+ P YSP+S S Y+P
Sbjct: 1524 YSPASPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPS-YSP 1568
Score = 53.5 bits (127), Expect = 7e-06
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSPSSP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1496 YSPSSPGYSPASPGYSPSSPAYSPTSPKYSPASPSYSPTSPA-YSP 1540
Score = 53.1 bits (126), Expect = 9e-06
Identities = 28/45 (62%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = -3
Query: 385 SPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 254
SPSSP S SP YSP+ +SPS+ GYSPS PGYSPSS Y+P
Sbjct: 1462 SPSSPSYSPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPG-YSP 1505
[46][TOP]
>UniRef100_C5LSN8 P35 antigen, putative (Fragment) n=1 Tax=Perkinsus marinus ATCC
50983 RepID=C5LSN8_9ALVE
Length = 170
Score = 56.6 bits (135), Expect = 8e-07
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 8/60 (13%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTPQTNDQDE 233
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y P DE
Sbjct: 92 YSPTSPAYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYYHPLVTSSDE 151
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 64 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPS-YSP 108
[47][TOP]
>UniRef100_C3ZES3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
RepID=C3ZES3_BRAFL
Length = 1934
Score = 56.6 bits (135), Expect = 8e-07
Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SP +SPS+ YSP+ P YSP ST +YTP
Sbjct: 1801 YSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSP-STPKYTP 1845
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1622 YSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + YTP
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YTP 1750
Score = 54.7 bits (130), Expect = 3e-06
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQ---FSPST-GYSPSQPGYSPSSTSQYTPQTNDQDE 233
YSP+SP S SP YSP+SP+ +SP+T GYSP+ P YSP S Q ++DE
Sbjct: 1878 YSPTSPKYSPTSPTYSPTSPKGSTYSPTTPGYSPASPTYSPESPESRATQEEEEDE 1933
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 YSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1687
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1708
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1729
Score = 53.9 bits (128), Expect = 5e-06
Identities = 26/46 (56%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+Y+P+SP++SP S YSP+ P YSP+S S Y+P
Sbjct: 1734 YSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPS-YSP 1778
[48][TOP]
>UniRef100_UPI000186D846 predicted protein n=1 Tax=Pediculus humanus corporis
RepID=UPI000186D846
Length = 1885
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP + VSP Y+P+SPQ+SP S YSP+ P YSPSS S +TP
Sbjct: 1761 YSPTSPSYASVSPQYTPTSPQYSPTSPTYSPTSPSYSPSSPS-HTP 1805
Score = 54.3 bits (129), Expect = 4e-06
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1594 YSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1638
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1680
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1587 YSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1631
Score = 53.9 bits (128), Expect = 5e-06
Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 8/56 (14%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP--STGYSPSQPGYSPSSTS------QYTPQTN 245
YSP+SP S SP YSPSSP +P ST YSP+ P YSP+S S QY+P ++
Sbjct: 1782 YSPTSPTYSPTSPSYSPSSPSHTPGASTRYSPTSPKYSPTSLSYSPASPQYSPSSS 1837
Score = 53.5 bits (127), Expect = 7e-06
Identities = 24/45 (53%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYT 257
YSP+SP S SP YSP+SP +SPS+ Y+P+ P +SP+S S Y+
Sbjct: 1692 YSPTSPSYSRTSPSYSPTSPSYSPSSPNYTPASPSFSPTSPSLYS 1736
Score = 53.1 bits (126), Expect = 9e-06
Identities = 25/42 (59%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 266
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1698
[49][TOP]
>UniRef100_Q9XZU8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Drosophila
pseudoobscura pseudoobscura RepID=Q9XZU8_DROPS
Length = 1811
Score = 56.2 bits (134), Expect = 1e-06
Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1602 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPAT 1648
[50][TOP]
>UniRef100_Q9XZS1 DNA-directed RNA polymerase n=1 Tax=Drosophila guanche
RepID=Q9XZS1_DROGU
Length = 1889
Score = 56.2 bits (134), Expect = 1e-06
Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPAT 1726
[51][TOP]
>UniRef100_Q9BMP3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis
RepID=Q9BMP3_MONBE
Length = 1743
Score = 56.2 bits (134), Expect = 1e-06
Identities = 30/54 (55%), Positives = 35/54 (64%), Gaps = 9/54 (16%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP---------STGYSPSQPGYSPSSTSQYTP 254
YSPSSP + SP YSP+SP +SP S GYSP+ PGYSPSS S Y+P
Sbjct: 1577 YSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPS-YSP 1629
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/49 (57%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTN 245
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P N
Sbjct: 1669 YSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPS-YSPTAN 1716
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP+YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1620 YSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPN-YSP 1664
Score = 54.7 bits (130), Expect = 3e-06
Identities = 28/54 (51%), Positives = 35/54 (64%), Gaps = 9/54 (16%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP---------STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S GYSP+ PGYSP+S Y+P
Sbjct: 1690 YSPTSPSYSPTSPNYSPTSPSYSPTANGTSGPTSPGYSPTSPGYSPTSPG-YSP 1742
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1641 YSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPS-YSP 1685
Score = 53.5 bits (127), Expect = 7e-06
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1648 YSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPN-YSP 1692
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1613 YSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPS-YSP 1657
[52][TOP]
>UniRef100_Q29IN2 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura
pseudoobscura RepID=Q29IN2_DROPS
Length = 1889
Score = 56.2 bits (134), Expect = 1e-06
Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPAT 1726
[53][TOP]
>UniRef100_B7PJA3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixodes scapularis
RepID=B7PJA3_IXOSC
Length = 1937
Score = 56.2 bits (134), Expect = 1e-06
Identities = 29/48 (60%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP SP S SP YSPSSP++SP S YSP+ P YSP S QYTP +
Sbjct: 1768 YSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPGS-PQYTPSS 1814
Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSPSS + YTP
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPN-YTP 1728
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1621 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1665
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSPSSP + SP YSP+SP +SP S YSP+ P YSP+S S Y+P +
Sbjct: 1719 YSPSSPNYTPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPSS 1765
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/48 (56%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP +SPS+ YSP P YSP S S Y+P +
Sbjct: 1740 YSPTSPSYSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPS-YSPSS 1786
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1658
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1686
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1707
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/48 (56%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP SPQ++PS+ YSP+ P YSP+S S Y+P +
Sbjct: 1789 YSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSPTSPS-YSPSS 1835
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/49 (55%), Positives = 35/49 (71%), Gaps = 4/49 (8%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS----TGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP+ + YSP+ PGYSPSS + Y+P
Sbjct: 1887 YSPTSPTYSPTSPKYSPTSPTYSPTSPKGSSYSPTSPGYSPSSPT-YSP 1934
Score = 53.9 bits (128), Expect = 5e-06
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS+ Y+P+ P YSP+S S Y+P
Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPS-YSP 1742
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
Y+PSSP S SP YSP+SPQ+SP S YSP+ P YSP+S + Y+P
Sbjct: 1852 YTPSSPKYSPTSPQYSPTSPQYSPTSPKYSPTSPKYSPTSPT-YSP 1896
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSPSSP++SP S YSP+ P Y+PSS +Y+P
Sbjct: 1817 YSPTSPTYSPTSPSYSPSSPKYSPTSPKYSPTSPTYTPSS-PKYSP 1861
[54][TOP]
>UniRef100_B6AG69 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
RepID=B6AG69_9CRYT
Length = 1927
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP+ S SP+YSP+SP +SP S YSPS P YSP+S S Y P
Sbjct: 1769 YSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPSSPHYSPTSPS-YNP 1813
Score = 55.8 bits (133), Expect = 1e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 254
YSPSSP+ S SP Y+P+SP +SPS+ Y+P+ P YSPSS QY P
Sbjct: 1797 YSPSSPHYSPTSPSYNPASPNYSPSSPHYNPASPNYSPSS-PQYNP 1841
Score = 55.5 bits (132), Expect = 2e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP+ S SP+YSPSSP +SP S Y+P+ P YSPSS Y P
Sbjct: 1783 YSPTSPHYSPTSPNYSPSSPHYSPTSPSYNPASPNYSPSS-PHYNP 1827
Score = 55.5 bits (132), Expect = 2e-06
Identities = 26/48 (54%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTPQT 248
YSPSSP+ + SP+YSPSSPQ++P+ YSPS P Y+P+S + Y+P +
Sbjct: 1818 YSPSSPHYNPASPNYSPSSPQYNPALPNYSPSSPQYNPTSPN-YSPSS 1864
Score = 54.7 bits (130), Expect = 3e-06
Identities = 26/48 (54%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP+ S SP+YSP+SP +SP S YSP+ P YSP+S + Y+P +
Sbjct: 1755 YSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPN-YSPSS 1801
Score = 54.3 bits (129), Expect = 4e-06
Identities = 26/46 (56%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP+ S SP+YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1741 YSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPN-YSP 1785
Score = 53.5 bits (127), Expect = 7e-06
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP+ S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1727 YSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPN-YSP 1771
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP+ S SP YSP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1720 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTS-PHYSP 1764
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP+ S SP YSP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1734 YSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTS-PHYSP 1778
[55][TOP]
>UniRef100_B4L732 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4L732_DROMO
Length = 1889
Score = 56.2 bits (134), Expect = 1e-06
Identities = 29/48 (60%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S +SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1680 YSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1726
[56][TOP]
>UniRef100_B4H2R8 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis
RepID=B4H2R8_DROPE
Length = 1804
Score = 56.2 bits (134), Expect = 1e-06
Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1614 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPAT 1660
[57][TOP]
>UniRef100_B3RM26 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
RepID=B3RM26_TRIAD
Length = 1784
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/50 (56%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTND 242
YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S S Y+P + D
Sbjct: 1732 YSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPS-YSPTSPD 1780
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1676 YSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1720
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S S Y+P
Sbjct: 1599 YSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPS-YSP 1643
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S S Y+P
Sbjct: 1655 YSPTSPSYSPTSPSYSPTSPKYSPTSPRYSPTSPSYSPTSPS-YSP 1699
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S S Y+P
Sbjct: 1704 YSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPS-YSP 1748
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1627 YSPTSPRYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPS-YSP 1671
Score = 53.5 bits (127), Expect = 7e-06
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S +Y+P
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTS-PKYSP 1678
[58][TOP]
>UniRef100_A9V5W6 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis
RepID=A9V5W6_MONBE
Length = 1307
Score = 56.2 bits (134), Expect = 1e-06
Identities = 30/54 (55%), Positives = 35/54 (64%), Gaps = 9/54 (16%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP---------STGYSPSQPGYSPSSTSQYTP 254
YSPSSP + SP YSP+SP +SP S GYSP+ PGYSPSS S Y+P
Sbjct: 1141 YSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPS-YSP 1193
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/49 (57%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTN 245
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P N
Sbjct: 1233 YSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPS-YSPTAN 1280
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP+YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1184 YSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPN-YSP 1228
Score = 54.7 bits (130), Expect = 3e-06
Identities = 28/54 (51%), Positives = 35/54 (64%), Gaps = 9/54 (16%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP---------STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S GYSP+ PGYSP+S Y+P
Sbjct: 1254 YSPTSPSYSPTSPNYSPTSPSYSPTANGTSGPTSPGYSPTSPGYSPTSPG-YSP 1306
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1205 YSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPS-YSP 1249
Score = 53.5 bits (127), Expect = 7e-06
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1212 YSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPN-YSP 1256
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1177 YSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPS-YSP 1221
[59][TOP]
>UniRef100_Q5ACI7 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=Q5ACI7_CANAL
Length = 1728
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S S Y+P
Sbjct: 1592 YSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPS-YSP 1636
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1655 YSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTS-PQYSP 1699
Score = 55.8 bits (133), Expect = 1e-06
Identities = 29/53 (54%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQDE 233
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP S Y P+ +DE
Sbjct: 1676 YSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPGSPG-YEPEPPKKDE 1727
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S S Y+P
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPS-YSP 1685
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1613 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPS-YSP 1657
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 1634 YSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTS-PQYSP 1678
[60][TOP]
>UniRef100_C4YN85 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=C4YN85_CANAL
Length = 1742
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S S Y+P
Sbjct: 1606 YSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPS-YSP 1650
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1669 YSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTS-PQYSP 1713
Score = 55.8 bits (133), Expect = 1e-06
Identities = 29/53 (54%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQDE 233
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP S Y P+ +DE
Sbjct: 1690 YSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPGSPG-YEPEPPKKDE 1741
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S S Y+P
Sbjct: 1655 YSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPS-YSP 1699
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPS-YSP 1671
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 1648 YSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTS-PQYSP 1692
[61][TOP]
>UniRef100_B5RSM9 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
RepID=B5RSM9_DEBHA
Length = 1749
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQDE 233
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP S S Y+P++ + +
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPGSPS-YSPESESKSK 1742
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S S Y+P
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPS-YSP 1707
Score = 55.1 bits (131), Expect = 2e-06
Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTND 242
YSP+SP S SP YSP+SPQ+SP S YSP P YSP S S+ + D
Sbjct: 1698 YSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPGSPSYSPESESKSKDEKKD 1747
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS-PQYSP 1686
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1558 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1602
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1579 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1623
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1600 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1644
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1621 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1665
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 1684 YSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTS-PQYSP 1728
[62][TOP]
>UniRef100_P16356 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
elegans RepID=RPB1_CAEEL
Length = 1852
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS+ YSPS P YSPSS +Y+P
Sbjct: 1633 YSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSS-PRYSP 1677
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSPSSP +SPS+ YSPS P YSP+S + Y+P
Sbjct: 1640 YSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPT-YSP 1684
Score = 55.5 bits (132), Expect = 2e-06
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SPQ+SP S YSPS P Y+PSS + Y P
Sbjct: 1723 YSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPT-YNP 1767
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P +
Sbjct: 1612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPSS 1658
Score = 54.7 bits (130), Expect = 3e-06
Identities = 26/45 (57%), Positives = 31/45 (68%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP + GYSPS P YSPSS + Y+P
Sbjct: 1689 YSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPT-YSP 1732
Score = 54.7 bits (130), Expect = 3e-06
Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSPSSP S SP YSP+SP +SP S YSP+ P YSPSS + YTP +
Sbjct: 1716 YSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPT-YTPSS 1762
[63][TOP]
>UniRef100_UPI0000F2BF13 PREDICTED: similar to RNA polymerase II isoform 2 n=1 Tax=Monodelphis
domestica RepID=UPI0000F2BF13
Length = 1932
Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 7/54 (12%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS------QYTPQT 248
YSP+SP S SP+Y+P+SP +SP S YSP+ P YSP+S S +YTPQ+
Sbjct: 1724 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1777
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1584 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1628
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1577 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1621
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1649
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1626 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1670
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1647 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1691
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1668 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1712
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S Y+P+ P YSP+S S Y+P
Sbjct: 1689 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPS-YSP 1733
[64][TOP]
>UniRef100_UPI0000F2BF12 PREDICTED: similar to RNA polymerase II isoform 1 n=1 Tax=Monodelphis
domestica RepID=UPI0000F2BF12
Length = 1970
Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 7/54 (12%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS------QYTPQT 248
YSP+SP S SP+Y+P+SP +SP S YSP+ P YSP+S S +YTPQ+
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1815
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1687
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1708
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1729
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1750
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S Y+P+ P YSP+S S Y+P
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPS-YSP 1771
[65][TOP]
>UniRef100_UPI0000EBDCD2 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
isoform 4 n=1 Tax=Bos taurus RepID=UPI0000EBDCD2
Length = 1970
Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 7/54 (12%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS------QYTPQT 248
YSP+SP S SP+Y+P+SP +SP S YSP+ P YSP+S S +YTPQ+
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1815
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1687
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1708
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1729
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1750
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S Y+P+ P YSP+S S Y+P
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPS-YSP 1771
[66][TOP]
>UniRef100_UPI0001B7A25C UPI0001B7A25C related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25C
Length = 1968
Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 7/54 (12%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS------QYTPQT 248
YSP+SP S SP+Y+P+SP +SP S YSP+ P YSP+S S +YTPQ+
Sbjct: 1764 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1817
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1624 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1668
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1617 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1661
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1645 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1689
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1666 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1710
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1687 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1731
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1708 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1752
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S Y+P+ P YSP+S S Y+P
Sbjct: 1729 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPS-YSP 1773
[67][TOP]
>UniRef100_UPI0001B7A25B UPI0001B7A25B related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25B
Length = 1932
Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 7/54 (12%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS------QYTPQT 248
YSP+SP S SP+Y+P+SP +SP S YSP+ P YSP+S S +YTPQ+
Sbjct: 1724 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1777
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1584 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1628
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1577 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1621
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1649
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1626 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1670
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1647 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1691
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1668 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1712
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S Y+P+ P YSP+S S Y+P
Sbjct: 1689 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPS-YSP 1733
[68][TOP]
>UniRef100_UPI0000DA33D8 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) n=1 Tax=Rattus norvegicus RepID=UPI0000DA33D8
Length = 1970
Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 7/54 (12%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS------QYTPQT 248
YSP+SP S SP+Y+P+SP +SP S YSP+ P YSP+S S +YTPQ+
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1815
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1687
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1708
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1729
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1750
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S Y+P+ P YSP+S S Y+P
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPS-YSP 1771
[69][TOP]
>UniRef100_O35559 DNA-directed RNA polymerase n=1 Tax=Cricetulus griseus
RepID=O35559_CRIGR
Length = 1970
Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 7/54 (12%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS------QYTPQT 248
YSP+SP S SP+Y+P+SP +SP S YSP+ P YSP+S S +YTPQ+
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1815
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1687
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1708
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1729
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1750
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S Y+P+ P YSP+S S Y+P
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPS-YSP 1771
[70][TOP]
>UniRef100_O08847 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=O08847_MOUSE
Length = 1966
Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 7/54 (12%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS------QYTPQT 248
YSP+SP S SP+Y+P+SP +SP S YSP+ P YSP+S S +YTPQ+
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1815
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1687
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1708
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1729
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1750
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S Y+P+ P YSP+S S Y+P
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPS-YSP 1771
[71][TOP]
>UniRef100_A4S3M0 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S3M0_OSTLU
Length = 1646
Score = 55.8 bits (133), Expect = 1e-06
Identities = 27/53 (50%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQDE 233
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P+ +++E
Sbjct: 1593 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSPKEEEENE 1644
[72][TOP]
>UniRef100_B4R347 RNA polymerase II 215kD subunit n=1 Tax=Drosophila simulans
RepID=B4R347_DROSI
Length = 552
Score = 55.8 bits (133), Expect = 1e-06
Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 343 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPVT 389
[73][TOP]
>UniRef100_B4PY98 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4PY98_DROYA
Length = 1889
Score = 55.8 bits (133), Expect = 1e-06
Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1726
[74][TOP]
>UniRef100_B4IK28 DNA-directed RNA polymerase n=1 Tax=Drosophila sechellia
RepID=B4IK28_DROSE
Length = 1887
Score = 55.8 bits (133), Expect = 1e-06
Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1678 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1724
[75][TOP]
>UniRef100_B3NUC1 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3NUC1_DROER
Length = 1889
Score = 55.8 bits (133), Expect = 1e-06
Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1726
[76][TOP]
>UniRef100_B3MQ29 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3MQ29_DROAN
Length = 1889
Score = 55.8 bits (133), Expect = 1e-06
Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1726
[77][TOP]
>UniRef100_A9UNH9 DNA-directed RNA polymerase n=1 Tax=Drosophila melanogaster
RepID=A9UNH9_DROME
Length = 1887
Score = 55.8 bits (133), Expect = 1e-06
Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1678 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1724
[78][TOP]
>UniRef100_B4E3V7 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4E3V7_HUMAN
Length = 1935
Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 7/54 (12%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS------QYTPQT 248
YSP+SP S SP+Y+P+SP +SP S YSP+ P YSP+S S +YTPQ+
Sbjct: 1727 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1780
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1645
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1687
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1708
Score = 53.5 bits (127), Expect = 7e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
Y+P SP S SP YSP+SP +SP S+ YSP+ P YSP+S S Y+P
Sbjct: 1573 YTPQSPSYSPTSPSYSPTSPSYSPTSSNYSPTSPSYSPTSPS-YSP 1617
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P Y+P+S S Y+P
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPS-YSP 1729
[79][TOP]
>UniRef100_B4DET1 cDNA FLJ53860, highly similar to DNA-directed RNA polymerase II
largest subunit (EC 2.7.7.6) n=1 Tax=Homo sapiens
RepID=B4DET1_HUMAN
Length = 855
Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 7/54 (12%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS------QYTPQT 248
YSP+SP S SP+Y+P+SP +SP S YSP+ P YSP+S S +YTPQ+
Sbjct: 661 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 714
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 521 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 565
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 514 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 558
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 542 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 586
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 563 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 607
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 584 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 628
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 649
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S Y+P+ P YSP+S S Y+P
Sbjct: 626 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPS-YSP 670
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/48 (56%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSPSSP S SP Y+P+SP++SP S YSP+ P YSP+S + Y+P T
Sbjct: 724 YSPSSPSYSPTSPKYTPTSPKYSPTSPKYSPTSPKYSPTSPT-YSPTT 770
[80][TOP]
>UniRef100_A6NN93 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=A6NN93_HUMAN
Length = 1970
Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 7/54 (12%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS------QYTPQT 248
YSP+SP S SP+Y+P+SP +SP S YSP+ P YSP+S S +YTPQ+
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1815
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1687
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1708
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1729
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1750
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S Y+P+ P YSP+S S Y+P
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPS-YSP 1771
[81][TOP]
>UniRef100_Q6FQS9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
RepID=Q6FQS9_CANGA
Length = 1715
Score = 55.8 bits (133), Expect = 1e-06
Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP-----QTNDQDER 230
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P D+DE+
Sbjct: 1655 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPGSPTYSPKDEDEK 1712
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1550 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1594
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1571 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1615
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1592 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1636
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1613 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1657
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1678
[82][TOP]
>UniRef100_C4R4Y0 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4R4Y0_PICPG
Length = 1743
Score = 55.8 bits (133), Expect = 1e-06
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP---QTNDQDERGQ 224
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P N + + G+
Sbjct: 1686 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPAS-PQYSPSRHSPNGESKEGE 1743
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1623 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1667
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1644 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1688
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1665 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1709
Score = 55.1 bits (131), Expect = 2e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1609 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1653
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1560 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1604
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1581 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1625
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1553 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1597
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 1602 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTS-PQYSP 1646
[83][TOP]
>UniRef100_B9WN64 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
RepID=B9WN64_CANDC
Length = 1735
Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S S Y+P
Sbjct: 1655 YSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPS-YSP 1699
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S S Y+P
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPS-YSP 1685
Score = 54.7 bits (130), Expect = 3e-06
Identities = 28/52 (53%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQD 236
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP S Y P++ +D
Sbjct: 1683 YSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPTSPRYSPGSPG-YEPKSPKKD 1733
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1543 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1587
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1564 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1608
Score = 53.9 bits (128), Expect = 5e-06
Identities = 28/53 (52%), Positives = 34/53 (64%), Gaps = 8/53 (15%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ PGYSP+S S Y+P
Sbjct: 1585 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPS-YSP 1636
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1613 YSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1657
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPS-YSP 1671
[84][TOP]
>UniRef100_A8Q5I6 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
RepID=A8Q5I6_MALGO
Length = 1607
Score = 55.8 bits (133), Expect = 1e-06
Identities = 29/55 (52%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQDERG 227
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P + G
Sbjct: 1528 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSPTSPQYSPSG 1581
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1479 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1523
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1500 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1544
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1521 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1565
[85][TOP]
>UniRef100_A5E6J4 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
RepID=A5E6J4_LODEL
Length = 1745
Score = 55.8 bits (133), Expect = 1e-06
Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 7/60 (11%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS------QYTPQTNDQDER 230
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S S QY+P + R
Sbjct: 1666 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPR 1725
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 1645 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS-PQYSP 1689
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1540 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1584
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1561 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1605
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1582 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1626
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1603 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1647
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1624 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1668
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/48 (56%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SPQ+SP S YSP P YSP S +Y P++
Sbjct: 1694 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPRSPNYSPKS-PEYKPKS 1740
[86][TOP]
>UniRef100_A3GID7 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
RepID=A3GID7_PICST
Length = 1739
Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1669 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTS-PQYSP 1713
Score = 54.7 bits (130), Expect = 3e-06
Identities = 28/58 (48%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT-NDQDERGQD 221
YSP+SP S SP YSP+SP +SP S YSP+ P YSP S +Y+P + +D++ +D
Sbjct: 1683 YSPTSPQYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPGS-PEYSPNSPKTEDKKNED 1739
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1550 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPS-YSP 1594
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1571 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1615
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1592 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1636
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1613 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1657
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1678
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 1655 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTS-PQYSP 1699
[87][TOP]
>UniRef100_P08775 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Mus musculus
RepID=RPB1_MOUSE
Length = 1970
Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 7/54 (12%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS------QYTPQT 248
YSP+SP S SP+Y+P+SP +SP S YSP+ P YSP+S S +YTPQ+
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1815
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1687
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1708
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1729
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1750
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S Y+P+ P YSP+S S Y+P
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPS-YSP 1771
[88][TOP]
>UniRef100_P24928 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Euarchontoglires
RepID=RPB1_HUMAN
Length = 1970
Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 7/54 (12%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS------QYTPQT 248
YSP+SP S SP+Y+P+SP +SP S YSP+ P YSP+S S +YTPQ+
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1815
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1687
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1708
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1729
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1750
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S Y+P+ P YSP+S S Y+P
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPS-YSP 1771
[89][TOP]
>UniRef100_P04052 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Drosophila
melanogaster RepID=RPB1_DROME
Length = 1887
Score = 55.8 bits (133), Expect = 1e-06
Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1678 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1724
[90][TOP]
>UniRef100_P11414 DNA-directed RNA polymerase II subunit RPB1 (Fragment) n=1
Tax=Cricetulus griseus RepID=RPB1_CRIGR
Length = 467
Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 7/54 (12%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS------QYTPQT 248
YSP+SP S SP+Y+P+SP +SP S YSP+ P YSP+S S +YTPQ+
Sbjct: 259 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 312
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 119 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 163
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 112 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 156
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 140 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 184
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 161 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 205
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 182 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 226
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 203 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 247
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S Y+P+ P YSP+S S Y+P
Sbjct: 224 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPS-YSP 268
[91][TOP]
>UniRef100_UPI00003BD271 hypothetical protein DEHA0A14036g n=1 Tax=Debaryomyces hansenii
CBS767 RepID=UPI00003BD271
Length = 1749
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S S Y+P
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPS-YSP 1707
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS-PQYSP 1686
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1558 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1602
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1579 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1623
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1600 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1644
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1621 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1665
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQDE 233
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP S Y+P++ + +
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPGS-PLYSPESESKSK 1742
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 1684 YSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTS-PQYSP 1728
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTND 242
YSP+SP S SP YSP+SPQ+SP S YSP P YSP S S+ + D
Sbjct: 1698 YSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPGSPLYSPESESKSKDEKKD 1747
[92][TOP]
>UniRef100_Q5CUJ2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cryptosporidium parvum
Iowa II RepID=Q5CUJ2_CRYPV
Length = 1902
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP+ S SP YSP+SP +SP S YSPS P YSP+S QY+P
Sbjct: 1766 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTS-PQYSP 1810
Score = 55.5 bits (132), Expect = 2e-06
Identities = 23/47 (48%), Positives = 36/47 (76%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP+Y+P+SP +SP++ YSP+ P Y+P+S + Y+P +
Sbjct: 1801 YSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSPN-YSPSS 1846
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 254
YSP+SP+ S SP YSP+SP +SPS+ YSP+ P YSP+S + Y P
Sbjct: 1773 YSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPN-YNP 1817
[93][TOP]
>UniRef100_Q5CH45 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium hominis
RepID=Q5CH45_CRYHO
Length = 1895
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP+ S SP YSP+SP +SP S YSPS P YSP+S QY+P
Sbjct: 1759 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTS-PQYSP 1803
Score = 55.5 bits (132), Expect = 2e-06
Identities = 23/47 (48%), Positives = 36/47 (76%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP+Y+P+SP +SP++ YSP+ P Y+P+S + Y+P +
Sbjct: 1794 YSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSPN-YSPSS 1839
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 254
YSP+SP+ S SP YSP+SP +SPS+ YSP+ P YSP+S + Y P
Sbjct: 1766 YSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPN-YNP 1810
[94][TOP]
>UniRef100_Q6CL79 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
RepID=Q6CL79_KLULA
Length = 1720
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 8/64 (12%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTPQTNDQDE 233
YSP+SP S SP YSP+SP +SP S YSP+ P YSP S S P+ + DE
Sbjct: 1655 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPGSYSPAEPKQQESDE 1714
Query: 232 RGQD 221
++
Sbjct: 1715 EKKE 1718
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1550 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1594
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1571 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1615
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1592 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1636
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1613 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1657
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1678
[95][TOP]
>UniRef100_O94231 RNA polymerase II largest subunit (Fragment) n=1 Tax=Kluyveromyces
lactis RepID=O94231_KLULA
Length = 414
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 8/64 (12%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTPQTNDQDE 233
YSP+SP S SP YSP+SP +SP S YSP+ P YSP S S P+ + DE
Sbjct: 349 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPGSYSPAEPKQQESDE 408
Query: 232 RGQD 221
++
Sbjct: 409 EKKE 412
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 244 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 288
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 265 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 309
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 286 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 330
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 307 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 351
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 328 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 372
[96][TOP]
>UniRef100_C5E245 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5E245_LACTC
Length = 1740
Score = 55.5 bits (132), Expect = 2e-06
Identities = 30/61 (49%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP----QTNDQDERGQ 224
YSP+SP S SP YSP+SP +SP S YSP+ P YSP S S Y+P + ND D
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPGSPS-YSPGSPKKENDNDNNNN 1735
Query: 223 D 221
+
Sbjct: 1736 N 1736
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1551 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1595
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1572 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1616
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1593 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1637
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1658
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1679
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1700
Score = 53.1 bits (126), Expect = 9e-06
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQDERGQD 221
YSP+SP S SP YSP+SP +SP S YSP P YSP S + N+ + +
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPGSPSYSPGSPKKENDNDNNNNNNNNN 1740
[97][TOP]
>UniRef100_A1YIA7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pichia kudriavzevii
RepID=A1YIA7_ISSOR
Length = 1647
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1561 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1605
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1582 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1626
Score = 55.1 bits (131), Expect = 2e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1547 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1591
Score = 55.1 bits (131), Expect = 2e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S S Y+P
Sbjct: 1603 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPS-YSP 1647
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1519 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1563
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1512 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1556
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1498 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPS-YSP 1542
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 1540 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTS-PQYSP 1584
[98][TOP]
>UniRef100_P35074 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
briggsae RepID=RPB1_CAEBR
Length = 1853
Score = 55.5 bits (132), Expect = 2e-06
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSPSSP S SP YSP+SPQ+SP S YSPS P Y+PSS + Y P
Sbjct: 1724 YSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPT-YNP 1768
Score = 54.7 bits (130), Expect = 3e-06
Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSPSSP S SP YSP+SP +SP S YSP+ P YSPSS + YTP +
Sbjct: 1717 YSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPT-YTPSS 1763
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1616 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1660
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSPSS +Y+P
Sbjct: 1637 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSS-PRYSP 1681
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSPSSP++SP S YSP+ P YSP+S + Y+P
Sbjct: 1658 YSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPT-YSP 1702
[99][TOP]
>UniRef100_UPI0001951285 220 kDa DNA-directed RNA polymerase polypeptide A n=1 Tax=Canis lupus
familiaris RepID=UPI0001951285
Length = 1969
Score = 55.1 bits (131), Expect = 2e-06
Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTS------QYTPQT 248
YSP+SP S SP+Y+P SP +SP++ SP+ P YSP+S S +YTPQ+
Sbjct: 1762 YSPTSPSYSPTSPNYTPMSPNYSPTSPNSPTSPSYSPTSPSYSPSSPRYTPQS 1814
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1687
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1708
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1729
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1743
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1750
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1771
[100][TOP]
>UniRef100_Q5EXZ8 RNA polymerase II largest subunit (Fragment) n=1 Tax=Periplaneta
americana RepID=Q5EXZ8_PERAM
Length = 97
Score = 55.1 bits (131), Expect = 2e-06
Identities = 27/48 (56%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTPQT 248
YSPSSP S SP YSP+SPQ+SPS+ YSP+ P Y+P+S + Y+P +
Sbjct: 23 YSPSSPSYSPTSPTYSPTSPQYSPSSSKYSPTSPTYTPTSPN-YSPSS 69
[101][TOP]
>UniRef100_P36594 DNA-directed RNA polymerase II subunit rpb1 n=1
Tax=Schizosaccharomyces pombe RepID=RPB1_SCHPO
Length = 1752
Score = 55.1 bits (131), Expect = 2e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1599 YSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1643
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1664
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1685
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1662 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1706
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1683 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1727
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1704 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1748
Score = 53.1 bits (126), Expect = 9e-06
Identities = 25/42 (59%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 266
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 1711 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1752
[102][TOP]
>UniRef100_UPI0001796DD3 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase II subunit A) (DNA-directed RNA polymerase III
largest subunit) n=1 Tax=Equus caballus
RepID=UPI0001796DD3
Length = 1834
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1687
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1708
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1729
Score = 53.5 bits (127), Expect = 7e-06
Identities = 26/48 (54%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP + SP YSP+SP +SP S Y+P+ P YSP+S S Y+P T
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPS-YSPTT 1794
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1750
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S Y+P+ P YSP+S S Y+P
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPS-YSP 1771
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+Y+P+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTTPSYSPTSPS-YSP 1806
Score = 53.1 bits (126), Expect = 9e-06
Identities = 25/46 (54%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 254
YSP+SP + SP+YSP+SP +SP+T YSP+ P YSP+S Y+P
Sbjct: 1769 YSPTSPNYTPTSPNYSPTSPSYSPTTPSYSPTSPSYSPTSPG-YSP 1813
[103][TOP]
>UniRef100_UPI000179348F PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179348F
Length = 1862
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P +
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPSS 1737
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1693
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1714
Score = 53.1 bits (126), Expect = 9e-06
Identities = 28/46 (60%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSPS P Y+ SS S YTP
Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYAASSPS-YTP 1749
[104][TOP]
>UniRef100_UPI000179338A PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179338A
Length = 1862
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P +
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPSS 1737
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1693
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1714
Score = 53.1 bits (126), Expect = 9e-06
Identities = 28/46 (60%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSPS P Y+ SS S YTP
Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYTASSPS-YTP 1749
[105][TOP]
>UniRef100_UPI0000E24648 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) n=1 Tax=Pan troglodytes RepID=UPI0000E24648
Length = 1913
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1687
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1708
Score = 53.9 bits (128), Expect = 5e-06
Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTND 242
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y P D
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSQS-YHPTVVD 1733
[106][TOP]
>UniRef100_UPI00005A0B2C PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 23 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2C
Length = 1888
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1621 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1665
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1658
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1686
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1707
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1728
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 4/49 (8%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST----GYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS+ Y+P+ P YSPSS +YTP
Sbjct: 1726 YSPTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSS-PEYTP 1773
Score = 53.5 bits (127), Expect = 7e-06
Identities = 26/48 (54%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P +
Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSPSS 1751
[107][TOP]
>UniRef100_UPI00005A0B2B PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 22 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2B
Length = 1892
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1607 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1651
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1600 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1644
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1628 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1672
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1693
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1714
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1728
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1735
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1756
[108][TOP]
>UniRef100_UPI00005A0B2A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 21 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2A
Length = 1896
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1611 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1655
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1604 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1648
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1632 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1676
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1653 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1697
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1674 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1718
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1688 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1732
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1695 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1739
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1716 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1760
[109][TOP]
>UniRef100_UPI00005A0B29 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 20 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B29
Length = 1891
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1590 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1634
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1583 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1627
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1611 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1655
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1632 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1676
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1653 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1697
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1667 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1711
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1674 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1718
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1695 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1739
[110][TOP]
>UniRef100_UPI00005A0B28 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 19 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B28
Length = 1908
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1607 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1651
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1600 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1644
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1628 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1672
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1693
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1714
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1728
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1735
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1756
[111][TOP]
>UniRef100_UPI00005A0B27 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 18 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B27
Length = 1831
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1540 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1584
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1533 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1577
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1561 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1605
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1582 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1626
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1603 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1647
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1617 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1661
Score = 54.3 bits (129), Expect = 4e-06
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+Y+P SP +SP+ YSPS P Y+P+S +Y+P
Sbjct: 1680 YSPTSPSYSPTSPNYTPMSPNYSPTPSYSPSSPEYTPTS-PKYSP 1723
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1624 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1668
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1645 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1689
[112][TOP]
>UniRef100_UPI00005A0B26 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 17 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B26
Length = 1684
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1517 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1561
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1510 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1554
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1538 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1582
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1559 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1603
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1580 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1624
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1594 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1638
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1645
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1666
[113][TOP]
>UniRef100_UPI00005A0B25 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 16 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B25
Length = 1752
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1517 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1561
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1510 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1554
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1538 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1582
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1559 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1603
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1580 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1624
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1594 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1638
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1645
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1666
[114][TOP]
>UniRef100_UPI00005A0B24 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 15 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B24
Length = 1924
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1623 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1667
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1616 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1660
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1644 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1688
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1665 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1709
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1686 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1730
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1700 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1744
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1707 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1751
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1728 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1772
[115][TOP]
>UniRef100_UPI00005A0B23 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 14 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B23
Length = 1653
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1486 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1530
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1479 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1523
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1507 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1551
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1528 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1572
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1549 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1593
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1563 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1607
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1614
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1591 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1635
[116][TOP]
>UniRef100_UPI00005A0B22 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 13 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B22
Length = 1722
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1486 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1530
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1479 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1523
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1507 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1551
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1528 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1572
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1549 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1593
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/48 (56%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP +SPS+ YSP+ P YSP+S + Y+P T
Sbjct: 1591 YSPTSPSYSPTSPSYSPTSPNYSPSSPKYSPTSPKYSPTSPT-YSPTT 1637
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/46 (58%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSPSSP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1598 YSPTSPSYSPTSPNYSPSSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1642
Score = 53.5 bits (127), Expect = 7e-06
Identities = 26/48 (54%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P +
Sbjct: 1570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSPSS 1616
[117][TOP]
>UniRef100_UPI00005A0B21 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 12 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B21
Length = 1922
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1621 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1665
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1658
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1686
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1707
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1728
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1742
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1749
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1726 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1770
[118][TOP]
>UniRef100_UPI00005A0B20 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 11 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B20
Length = 1923
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1687
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1708
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1729
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1743
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1750
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1771
[119][TOP]
>UniRef100_UPI00005A0B1F PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 10 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1F
Length = 1840
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1555 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1599
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1548 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1592
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1576 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1620
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1597 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1641
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1618 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1662
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1632 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1676
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1639 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1683
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1660 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1704
[120][TOP]
>UniRef100_UPI00005A0B1E PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 9 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1E
Length = 1851
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1559 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1603
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1552 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1596
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1580 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1624
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1645
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1680
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
Y+P+SP S SP YSPSSP +SP S Y+P+ P YSPSS +YTP
Sbjct: 1692 YTPTSPSYSPTSPSYSPSSPSYSPTSPKYTPTSPSYSPSS-PEYTP 1736
Score = 53.5 bits (127), Expect = 7e-06
Identities = 26/48 (54%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P +
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSPSS 1710
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1687
[121][TOP]
>UniRef100_UPI00005A0B1D PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 1 n=2 Tax=Canis lupus familiaris
RepID=UPI00005A0B1D
Length = 1764
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1597 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1641
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1590 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1634
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1618 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1662
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1639 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1683
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1660 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1704
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1674 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1718
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1681 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1725
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1702 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1746
[122][TOP]
>UniRef100_UPI00005A0B1C PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 8 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1C
Length = 1719
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1552 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1596
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1545 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1589
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1573 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1617
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1594 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1638
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1680
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1701
[123][TOP]
>UniRef100_UPI00005A0B1B PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 7 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1B
Length = 1858
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1552 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1596
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1545 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1589
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1573 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1617
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1594 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1638
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 53.9 bits (128), Expect = 5e-06
Identities = 26/46 (56%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP + +SP+YSP+SP +SP S Y+P+ P YSPSS +YTP
Sbjct: 1699 YSPTSPNYTPMSPNYSPTSPSYSPTSPKYTPTSPSYSPSS-PEYTP 1743
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1680
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1701
[124][TOP]
>UniRef100_UPI00005A0B1A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 6 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1A
Length = 1767
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1600 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1644
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1593 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1637
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1621 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1665
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1686
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1707
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1721
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1728
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1749
[125][TOP]
>UniRef100_UPI00005A0B19 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 5 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B19
Length = 1693
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1526 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1570
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1519 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1563
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1547 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1591
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1568 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1612
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1589 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1633
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1603 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1647
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1610 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1654
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1631 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1675
[126][TOP]
>UniRef100_UPI00005A0B17 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 3 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B17
Length = 1788
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1621 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1665
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1658
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1686
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1707
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1728
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1742
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1749
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1726 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1770
[127][TOP]
>UniRef100_UPI00005A0B16 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 2 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B16
Length = 1922
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1621 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1665
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPS-YSP 1658
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1686
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1707
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1728
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1742
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN-YSP 1749
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SPS Y+P+ P YSP+S S Y+P
Sbjct: 1726 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPS-YSP 1770
[128][TOP]
>UniRef100_B4NDK9 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4NDK9_DROWI
Length = 1890
Score = 54.7 bits (130), Expect = 3e-06
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
Y+P+SP S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1681 YTPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1727
[129][TOP]
>UniRef100_C4Y5N3 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4Y5N3_CLAL4
Length = 281
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 209 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS-PQYSP 253
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 83 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 127
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 104 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 148
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 125 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 169
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 146 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 190
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 167 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 211
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 188 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 232
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/42 (61%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 266
YSP+SP S SP YSP+SPQ+SP S YSP P YSP S S
Sbjct: 230 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPGSPSYSPRSPS 271
[130][TOP]
>UniRef100_C4VAM1 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01
RepID=C4VAM1_NOSCE
Length = 1612
Score = 54.7 bits (130), Expect = 3e-06
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQDERG 227
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P + G
Sbjct: 1542 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSLS-YSPTSPSYSPTG 1595
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1458 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1502
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1479 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1523
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1500 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1544
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1521 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1565
Score = 53.5 bits (127), Expect = 7e-06
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQDERGQD 221
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+ + + N++ R ++
Sbjct: 1556 YSPTSPSYSPTSPSYSPTSPSYSPTSLSYSPTSPSYSPTGYKKDKDKKNERKRRHEN 1612
[131][TOP]
>UniRef100_UPI000151A8B3 hypothetical protein PGUG_01105 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151A8B3
Length = 1018
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 819 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 863
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 840 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 884
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 861 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 905
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 868 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 912
[132][TOP]
>UniRef100_UPI0000F24379 DNA-directed RNA polymerase II largest subunit (RNA polymerase II
subunit 1) (B220) n=1 Tax=Pichia stipitis CBS 6054
RepID=UPI0000F24379
Length = 1739
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1550 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPS-YSP 1594
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1571 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1615
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1592 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1636
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1613 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1657
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1678
Score = 54.3 bits (129), Expect = 4e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1669 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPLYSPTS-PQYSP 1713
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 1655 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTS-PQYSP 1699
Score = 53.9 bits (128), Expect = 5e-06
Identities = 28/58 (48%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT-NDQDERGQD 221
YSP+SP S SP YSP+SP +SP S YSP+ P YSP S +Y+P + +D++ +D
Sbjct: 1683 YSPTSPQYSPTSPQYSPTSPLYSPTSPQYSPTSPQYSPGS-PEYSPNSPKTEDKKNED 1739
[133][TOP]
>UniRef100_UPI0000E12351 Os05g0151000 n=1 Tax=Oryza sativa Japonica Group RepID=UPI0000E12351
Length = 2085
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1701 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS-SAYSP 1745
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+S +SP S YSP+ PGYSP+S S Y+P +
Sbjct: 1722 YSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPS-YSPSS 1768
Score = 53.5 bits (127), Expect = 7e-06
Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 7/52 (13%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS------QYTP 254
YSP+SP S S YSP+SP +SP S GYSP+ P YSPSS S +YTP
Sbjct: 1729 YSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTP 1780
[134][TOP]
>UniRef100_Q5WMZ9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q5WMZ9_ORYSJ
Length = 1741
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1648 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS-SAYSP 1692
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+S +SP S YSP+ PGYSP+S S Y+P +
Sbjct: 1669 YSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPS-YSPSS 1715
[135][TOP]
>UniRef100_Q0DKN9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q0DKN9_ORYSJ
Length = 1834
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1701 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS-SAYSP 1745
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+S +SP S YSP+ PGYSP+S S Y+P +
Sbjct: 1722 YSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPS-YSPSS 1768
Score = 53.5 bits (127), Expect = 7e-06
Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 7/52 (13%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS------QYTP 254
YSP+SP S S YSP+SP +SP S GYSP+ P YSPSS S +YTP
Sbjct: 1729 YSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTP 1780
[136][TOP]
>UniRef100_C1EA31 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1EA31_9CHLO
Length = 1720
Score = 54.3 bits (129), Expect = 4e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1646 YSPTSPAYSPTSPAYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1690
[137][TOP]
>UniRef100_Q9C428 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monoblepharis
macrandra RepID=Q9C428_9FUNG
Length = 1603
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1559 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1603
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP Y+P+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1538 YSPTSPSYSPTSPSYTPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1582
[138][TOP]
>UniRef100_A5DCV1 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
RepID=A5DCV1_PICGU
Length = 224
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 135 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 179
[139][TOP]
>UniRef100_Q8SSC4 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Encephalitozoon
cuniculi RepID=RPB1_ENCCU
Length = 1599
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1473 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1517
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1494 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1538
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1515 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1559
[140][TOP]
>UniRef100_Q58EF0 Polr2a protein (Fragment) n=2 Tax=Danio rerio RepID=Q58EF0_DANRE
Length = 161
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPS----TGYSPSQPGYSPSSTSQYTPQTNDQD 236
YSP+SP S SP YSP+SP +SP+ + YSP+ PGYSP+S + Y+P + D
Sbjct: 102 YSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPT-YSPAISPDD 155
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP+T YSP+ P YSP+S + YTP
Sbjct: 53 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPT-YTP 97
[141][TOP]
>UniRef100_UPI000151A8B4 hypothetical protein PGUG_01106 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151A8B4
Length = 224
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 135 YSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPS-YSP 179
[142][TOP]
>UniRef100_C1MI48 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MI48_9CHLO
Length = 1694
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S QY+P
Sbjct: 1610 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS-PQYSP 1654
[143][TOP]
>UniRef100_B7G9I2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G9I2_PHATR
Length = 1706
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTND 242
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P D
Sbjct: 1650 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSPSGGD 1698
Score = 53.1 bits (126), Expect = 9e-06
Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQDERGQD 221
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P + G D
Sbjct: 1643 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSPTSPAYSPSGGD 1698
[144][TOP]
>UniRef100_Q54LJ4 Type A von Willebrand factor domain-containing protein n=1
Tax=Dictyostelium discoideum RepID=Q54LJ4_DICDI
Length = 2563
Score = 53.5 bits (127), Expect = 7e-06
Identities = 25/45 (55%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYT 257
YSP+SP+ SP YSP+SP +SP S YSP+ P YSP+S S T
Sbjct: 1846 YSPTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYST 1890
[145][TOP]
>UniRef100_C6F1F1 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F1_PLAVI
Length = 211
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/48 (56%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S QY+P +
Sbjct: 63 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PQYSPSS 109
[146][TOP]
>UniRef100_B4MAN9 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
RepID=B4MAN9_DROVI
Length = 1889
Score = 53.5 bits (127), Expect = 7e-06
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YS +SP S +SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1680 YSSNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPAT 1726
[147][TOP]
>UniRef100_A5K7P4 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax
RepID=A5K7P4_PLAVI
Length = 2379
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/48 (56%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 248
YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S QY+P +
Sbjct: 2231 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PQYSPSS 2277
[148][TOP]
>UniRef100_O96452 DNA-directed RNA polymerase n=1 Tax=Antonospora locustae
RepID=O96452_ANTLO
Length = 1553
Score = 53.5 bits (127), Expect = 7e-06
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 7/59 (11%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ------YTPQTNDQDE 233
YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y P T +D+
Sbjct: 1481 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPVYRPSTRAKDQ 1539
[149][TOP]
>UniRef100_C6F1F2 RNA polymerase II (Fragment) n=1 Tax=Plasmodium cynomolgi
RepID=C6F1F2_9APIC
Length = 232
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 254
YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S QY+P
Sbjct: 84 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PQYSP 128
[150][TOP]
>UniRef100_B4JXA6 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4JXA6_DROGR
Length = 1889
Score = 53.1 bits (126), Expect = 9e-06
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 7/52 (13%)
Frame = -3
Query: 388 YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS------TSQYTP 254
YSP+SP S +SP YSPSSP +SP S YSP+ P YSP+S T Y+P
Sbjct: 1680 YSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVTPSYSP 1731