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[1][TOP]
>UniRef100_Q99367 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99367_SOYBN
Length = 494
Score = 178 bits (452), Expect = 1e-43
Identities = 82/86 (95%), Positives = 85/86 (98%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY
Sbjct: 407 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 466
Query: 305 SPSQPGYSPSSTSQYTPQTNDQDERG 228
SPSQPGYSPSSTSQYTPQT+D+D+ G
Sbjct: 467 SPSQPGYSPSSTSQYTPQTSDKDDGG 492
Score = 112 bits (280), Expect = 1e-23
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 303 PTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 362
Query: 311 GYSPSQPGYSPSSTSQYTP 255
GYSP+ P YSP+S S Y+P
Sbjct: 363 GYSPTSPSYSPTSPS-YSP 380
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 296 PTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 355
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ PGYSP+S S Y+P
Sbjct: 356 AYSPTSPGYSPTSPS-YSP 373
Score = 111 bits (277), Expect = 3e-23
Identities = 56/79 (70%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 254 PSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 313
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 314 AYSPTSPSYSPTSPS-YSP 331
Score = 111 bits (277), Expect = 3e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 275 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSP 334
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 335 SYSPTSPSYSPTSPS-YSP 352
Score = 110 bits (276), Expect = 4e-23
Identities = 56/79 (70%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S SP YSP+SP +SP S
Sbjct: 219 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 278
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 279 SYSPTSPSYSPTSPS-YSP 296
Score = 110 bits (276), Expect = 4e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 268 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSP 327
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 328 SYSPTSPSYSPTSPS-YSP 345
Score = 110 bits (275), Expect = 5e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 261 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSP 320
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 321 SYSPTSPSYSPTSPS-YSP 338
Score = 109 bits (272), Expect = 1e-22
Identities = 53/79 (67%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 317 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSP 376
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P S ++Y+P
Sbjct: 377 SYSPTSPSYNPQS-AKYSP 394
Score = 108 bits (270), Expect = 2e-22
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 247 PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 306
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 307 AYSPTSPAYSPTSPS-YSP 324
Score = 105 bits (263), Expect = 1e-21
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSP+SP YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 240 PTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 299
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 300 SYSPTSPAYSPTSPA-YSP 317
Score = 105 bits (263), Expect = 1e-21
Identities = 51/78 (65%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSPTSP+YSPTSP YSP+SP+YSP+SP S SP Y+P S ++SPS
Sbjct: 338 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLA 397
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSPS P SPS S Y+P
Sbjct: 398 YSPSSPRLSPS--SPYSP 413
Score = 105 bits (261), Expect = 2e-21
Identities = 53/79 (67%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 271
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 272 SYSPTSPSYSPTSPS-YSP 289
Score = 102 bits (253), Expect = 2e-20
Identities = 52/78 (66%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
SSP YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S SP YSPSSP +SP S
Sbjct: 206 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 265
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 266 YSPTSPSYSPTSPS-YSP 282
Score = 95.9 bits (237), Expect = 1e-18
Identities = 52/86 (60%), Positives = 62/86 (72%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP YSPTSP+YS P+SP YSP+SP S SP YSP+SP
Sbjct: 226 PTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSP 285
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + Y+P
Sbjct: 286 SYSPTSPSYSPTSPSYSPTSPA-YSP 310
Score = 84.7 bits (208), Expect = 3e-15
Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
Frame = -3
Query: 452 YSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSP 279
+SPTS P YSP+SP YSPSSP YSP+SP S SP YSP+SP +SP S YSPS PGYSP
Sbjct: 202 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 261
Query: 278 SSTSQYTP 255
+S + Y+P
Sbjct: 262 TSPA-YSP 268
[2][TOP]
>UniRef100_UPI0001985649 PREDICTED: similar to NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA
binding / DNA-directed RNA polymerase n=1 Tax=Vitis
vinifera RepID=UPI0001985649
Length = 1848
Score = 164 bits (415), Expect = 3e-39
Identities = 74/83 (89%), Positives = 80/83 (96%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
PSSPYSPTSPNYSPTSPSYSPTSPSYSP+SPTYSP+SPYNSGVSPDYSPSSPQ+SPS GY
Sbjct: 1761 PSSPYSPTSPNYSPTSPSYSPTSPSYSPASPTYSPTSPYNSGVSPDYSPSSPQYSPSAGY 1820
Query: 305 SPSQPGYSPSSTSQYTPQTNDQD 237
SPS PGYSPSSTSQYTPQ +++D
Sbjct: 1821 SPSAPGYSPSSTSQYTPQMSNKD 1843
Score = 112 bits (280), Expect = 1e-23
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1657 PTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 1716
Query: 311 GYSPSQPGYSPSSTSQYTP 255
GYSP+ P YSP+S S Y+P
Sbjct: 1717 GYSPTSPSYSPTSPS-YSP 1734
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1608 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSP 1667
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1668 AYSPTSPSYSPTSPS-YSP 1685
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1650 PTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1709
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ PGYSP+S S Y+P
Sbjct: 1710 AYSPTSPGYSPTSPS-YSP 1727
Score = 110 bits (276), Expect = 4e-23
Identities = 56/79 (70%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S SP YSP+SP +SP S
Sbjct: 1552 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 1611
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1612 SYSPTSPSYSPTSPS-YSP 1629
Score = 110 bits (276), Expect = 4e-23
Identities = 54/79 (68%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1671 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSP 1730
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+PSS ++Y+P
Sbjct: 1731 SYSPTSPSYNPSS-AKYSP 1748
Score = 109 bits (273), Expect = 8e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1594 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSP 1653
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1654 SYSPTSPAYSPTSPA-YSP 1671
Score = 109 bits (272), Expect = 1e-22
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1587 PSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1646
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1647 VYSPTSPSYSPTSPA-YSP 1664
Score = 108 bits (271), Expect = 1e-22
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1629 PTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSP 1688
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1689 SYSPTSPSYSPTSPS-YSP 1706
Score = 107 bits (267), Expect = 4e-22
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1580 PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1639
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1640 SYSPTSPVYSPTSPS-YSP 1657
Score = 107 bits (267), Expect = 4e-22
Identities = 52/78 (66%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSPTSP+YSPTSP YSP+SP+YSP+SP S SP Y+PSS ++SPS
Sbjct: 1692 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSLA 1751
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSPS P SPS S Y+P
Sbjct: 1752 YSPSSPRLSPS--SPYSP 1767
Score = 105 bits (261), Expect = 2e-21
Identities = 53/79 (67%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1545 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 1604
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1605 SYSPTSPSYSPTSPS-YSP 1622
Score = 104 bits (260), Expect = 3e-21
Identities = 49/73 (67%), Positives = 59/73 (80%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSP+SP YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1573 PTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1632
Query: 311 GYSPSQPGYSPSS 273
YSP+ P YSP+S
Sbjct: 1633 SYSPTSPSYSPTS 1645
Score = 102 bits (253), Expect = 2e-20
Identities = 52/78 (66%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
SSP YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S SP YSPSSP +SP S
Sbjct: 1539 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 1598
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1599 YSPTSPSYSPTSPS-YSP 1615
Score = 99.0 bits (245), Expect = 1e-19
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1615 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSP 1674
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1675 SYSPTSPSYSPTSPSYSPTSPS-YSP 1699
Score = 97.1 bits (240), Expect = 6e-19
Identities = 53/86 (61%), Positives = 62/86 (72%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP YSPTSP+YS P+SP YSP+SP S SP YSP+SP
Sbjct: 1559 PTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSP 1618
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1619 SYSPTSPSYSPTSPSYSPTSPS-YSP 1643
Score = 97.1 bits (240), Expect = 6e-19
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS---SPYNSGVSPD--YSPSSPQF 324
P+SP YSPTSP+YSPTSPSYSPTSPSY+PSS YSPS SP + +SP YSP+SP +
Sbjct: 1713 PTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSLAYSPSSPRLSPSSPYSPTSPNY 1772
Query: 323 SP-STGYSPSQPGYSPSSTSQYTP 255
SP S YSP+ P YSP+S + Y+P
Sbjct: 1773 SPTSPSYSPTSPSYSPASPT-YSP 1795
Score = 84.7 bits (208), Expect = 3e-15
Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
Frame = -3
Query: 452 YSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSP 279
+SPTS P YSP+SP YSPSSP YSP+SP S SP YSP+SP +SP S YSPS PGYSP
Sbjct: 1535 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 1594
Query: 278 SSTSQYTP 255
+S + Y+P
Sbjct: 1595 TSPA-YSP 1601
Score = 68.2 bits (165), Expect = 3e-10
Identities = 46/85 (54%), Positives = 54/85 (63%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSPYSP-TSPNYSPT--SPSYSPTS-PSYSPSSPTYSPSSPYNSG---VSPDYSPSSPQ 327
P+ SP T +SP ++SPTS P YSPSSP YSPSSP G SP YSP+SP
Sbjct: 1514 PNLRLSPITDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSP---GYSPTSPGYSPTSPG 1570
Query: 326 FSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S GYSP+ P YSPSS Y+P
Sbjct: 1571 YSPTSPGYSPTSPTYSPSSPG-YSP 1594
[3][TOP]
>UniRef100_Q99368 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99368_SOYBN
Length = 977
Score = 163 bits (413), Expect = 5e-39
Identities = 78/85 (91%), Positives = 81/85 (95%), Gaps = 1/85 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
PSSP SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSP+SPQFSPS G
Sbjct: 893 PSSPRLSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPTSPQFSPSAG 952
Query: 308 YSPSQPGYSPSSTSQYTPQTNDQDE 234
YSPSQPGYSPSSTSQ TPQT+D+DE
Sbjct: 953 YSPSQPGYSPSSTSQDTPQTSDKDE 977
Score = 106 bits (264), Expect = 9e-22
Identities = 54/79 (68%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP YSPTSP YSPTSP+YSPSSP YSP+SP S SP YSP+SP +SP S
Sbjct: 740 PSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPAYSPTSP 799
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YS + P YSP+S S Y+P
Sbjct: 800 AYSSTSPAYSPTSPS-YSP 817
Score = 106 bits (264), Expect = 9e-22
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSPTSP+YSPTSP+YSPTSPSYS +SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 805 SPAYSPTSPSYSPTSPAYSPTSPSYSLTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSY 864
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P YSP+S S Y PQ+
Sbjct: 865 SPTSPSYSPTSPS-YNPQS 882
Score = 105 bits (261), Expect = 2e-21
Identities = 53/79 (67%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP YSPTSP YSPTSP YSP+SPTYSPSSP S SP YSP+SP +SP S
Sbjct: 733 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 792
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YS S++ Y+P
Sbjct: 793 AYSPTSPAYS-STSPAYSP 810
Score = 105 bits (261), Expect = 2e-21
Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YS TSP+YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 789 PTSPAYSPTSPAYSSTSPAYSPTSPSYSPTSPAYSPTSPSYSLTSPSYSPTSPSYSPTSP 848
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 849 SYSPTSPAYSPTSPS-YSP 866
Score = 104 bits (259), Expect = 3e-21
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP YSPTSP+YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 761 PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSSTSPAYSPTSPSYSPTSP 820
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YS +S S Y+P
Sbjct: 821 AYSPTSPSYSLTSPS-YSP 838
Score = 100 bits (248), Expect = 7e-20
Identities = 51/81 (62%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YS TSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 817 PTSPAYSPTSPSYSLTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSP 876
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
Y+P YSPS Y+P +
Sbjct: 877 SYNPQSAKYSPSLA--YSPSS 895
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/72 (66%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
SSP YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 727 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 786
Query: 308 YSPSQPGYSPSS 273
YSP+ P YSP+S
Sbjct: 787 YSPTSPAYSPTS 798
Score = 93.6 bits (231), Expect = 6e-18
Identities = 51/88 (57%), Positives = 62/88 (70%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP------- 330
P+SP YSPTSP+YSPTSP+YSPTSP+YS +SP YSP+SP S SP YSP+SP
Sbjct: 775 PTSPAYSPTSPSYSPTSPAYSPTSPAYSSTSPAYSPTSPSYSPTSPAYSPTSPSYSLTSP 834
Query: 329 ---QFSPSTGYSPSQPGYSPSSTSQYTP 255
SPS YSP+ P YSP+S + Y+P
Sbjct: 835 SYSPTSPS--YSPTSPSYSPTSPA-YSP 859
Score = 90.5 bits (223), Expect = 5e-17
Identities = 49/82 (59%), Positives = 59/82 (71%), Gaps = 9/82 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP+YSP+SP YS P+SP+YSP+SP S SP YS +SP
Sbjct: 747 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSSTSP 806
Query: 329 QFSP-STGYSPSQPGYSPSSTS 267
+SP S YSP+ P YSP+S S
Sbjct: 807 AYSPTSPSYSPTSPAYSPTSPS 828
Score = 85.5 bits (210), Expect = 2e-15
Identities = 44/76 (57%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYS 303
SPY +SP YSP+SP YSPSSP YSP+SP S SP YSP+SP +SPS+ GYS
Sbjct: 715 SPYVGGMAFSPSSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS 774
Query: 302 PSQPGYSPSSTSQYTP 255
P+ P YSP+S S Y+P
Sbjct: 775 PTSPAYSPTSPS-YSP 789
Score = 63.5 bits (153), Expect = 7e-09
Identities = 42/82 (51%), Positives = 50/82 (60%), Gaps = 7/82 (8%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSP-----SYSPSS-PTYSPSSPYNSGVSPDYSPSSPQFSP 318
SP SPN + S + SP ++SPSS P YSPSSP S SP YSP+SP +SP
Sbjct: 695 SPSYLLSPNLRLSPSSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPSSPGYSPTSPGYSP 754
Query: 317 -STGYSPSQPGYSPSSTSQYTP 255
S GYSP+ P YSPSS Y+P
Sbjct: 755 TSPGYSPTSPTYSPSSPG-YSP 775
[4][TOP]
>UniRef100_B9SXC0 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9SXC0_RICCO
Length = 1855
Score = 162 bits (409), Expect = 1e-38
Identities = 76/85 (89%), Positives = 80/85 (94%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGV PDYSPSSPQ+SPS GY
Sbjct: 1754 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVGPDYSPSSPQYSPSAGY 1813
Query: 305 SPSQPGYSPSSTSQYTPQTNDQDER 231
SPS PGYSPSSTSQYT QT+ +D+R
Sbjct: 1814 SPSAPGYSPSSTSQYT-QTSTKDDR 1837
Score = 112 bits (280), Expect = 1e-23
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1650 PTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 1709
Query: 311 GYSPSQPGYSPSSTSQYTP 255
GYSP+ P YSP+S S Y+P
Sbjct: 1710 GYSPTSPSYSPTSPS-YSP 1727
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1643 PTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1702
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ PGYSP+S S Y+P
Sbjct: 1703 AYSPTSPGYSPTSPS-YSP 1720
Score = 110 bits (276), Expect = 4e-23
Identities = 56/79 (70%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S SP YSP+SP +SP S
Sbjct: 1552 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 1611
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1612 SYSPTSPSYSPTSPS-YSP 1629
Score = 110 bits (276), Expect = 4e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1594 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSP 1653
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1654 AYSPTSPAYSPTSPS-YSP 1671
Score = 110 bits (275), Expect = 5e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1615 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSP 1674
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1675 SYSPTSPSYSPTSPS-YSP 1692
Score = 109 bits (272), Expect = 1e-22
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1587 PSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1646
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1647 VYSPTSPAYSPTSPA-YSP 1664
Score = 109 bits (272), Expect = 1e-22
Identities = 53/79 (67%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1664 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSP 1723
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P S ++Y+P
Sbjct: 1724 SYSPTSPSYNPQS-AKYSP 1741
Score = 106 bits (264), Expect = 9e-22
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1580 PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1639
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1640 SYSPTSPVYSPTSPA-YSP 1657
Score = 105 bits (263), Expect = 1e-21
Identities = 51/78 (65%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSPTSP+YSPTSP YSP+SP+YSP+SP S SP Y+P S ++SPS
Sbjct: 1685 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLA 1744
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSPS P SPS S Y+P
Sbjct: 1745 YSPSSPRLSPS--SPYSP 1760
Score = 105 bits (261), Expect = 2e-21
Identities = 53/79 (67%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1545 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 1604
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1605 SYSPTSPSYSPTSPS-YSP 1622
Score = 104 bits (260), Expect = 3e-21
Identities = 49/73 (67%), Positives = 59/73 (80%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSP+SP YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1573 PTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1632
Query: 311 GYSPSQPGYSPSS 273
YSP+ P YSP+S
Sbjct: 1633 SYSPTSPSYSPTS 1645
Score = 101 bits (251), Expect = 3e-20
Identities = 50/77 (64%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S SP YSPSSP +SP S Y
Sbjct: 1540 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1599
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1600 SPTSPSYSPTSPS-YSP 1615
Score = 99.0 bits (245), Expect = 1e-19
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1601 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSP 1660
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1661 AYSPTSPSYSPTSPSYSPTSPS-YSP 1685
Score = 98.2 bits (243), Expect = 2e-19
Identities = 58/103 (56%), Positives = 67/103 (65%), Gaps = 15/103 (14%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTY-------------SPSSPYNSGVSPD 348
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+Y SPSSP S SP
Sbjct: 1699 PTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSP- 1757
Query: 347 YSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQDERGQD 222
YSP+SP +SP S YSP+ P YSPSS + Y+P + G D
Sbjct: 1758 YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSGVGPD 1799
Score = 97.1 bits (240), Expect = 6e-19
Identities = 53/86 (61%), Positives = 62/86 (72%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP YSPTSP+YS P+SP YSP+SP S SP YSP+SP
Sbjct: 1559 PTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSP 1618
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1619 SYSPTSPSYSPTSPSYSPTSPS-YSP 1643
Score = 97.1 bits (240), Expect = 6e-19
Identities = 52/85 (61%), Positives = 62/85 (72%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1622 PTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSP 1681
Query: 311 GYSPSQP---GYSPS---STSQYTP 255
YSP+ P SPS ++ Y+P
Sbjct: 1682 SYSPTSPSYSPTSPSYSPTSPAYSP 1706
Score = 87.4 bits (215), Expect = 4e-16
Identities = 48/77 (62%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPT-SPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
SPY P +SPT SP YSP+SP YSPSSP YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1527 SPYVSGMP-FSPTLSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY 1585
Query: 305 SPSQPGYSPSSTSQYTP 255
SPS PGYSP+S + Y+P
Sbjct: 1586 SPSSPGYSPTSPA-YSP 1601
Score = 70.1 bits (170), Expect = 7e-11
Identities = 44/84 (52%), Positives = 55/84 (65%), Gaps = 5/84 (5%)
Frame = -3
Query: 485 PSSPYSPTSP-NYSP--TSPSYSPT-SPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 318
PS SPT+ +SP + +SPT SP YSPSSP YSPSSP YSP+SP +SP
Sbjct: 1514 PSLRLSPTTDAQFSPYVSGMPFSPTLSPGYSPSSPGYSPSSP-------GYSPTSPGYSP 1566
Query: 317 -STGYSPSQPGYSPSSTSQYTPQT 249
S GYSP+ PGYSP+S + Y+P +
Sbjct: 1567 TSPGYSPTSPGYSPTSPT-YSPSS 1589
Score = 53.9 bits (128), Expect = 5e-06
Identities = 39/81 (48%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGV------SPDYSPSSPQFSP 318
SP S T + SPSY SPS S T + SPY SG+ SP YSPSSP
Sbjct: 1494 SPVSVTPYHDGMMSPSYL-LSPSLRLSPTTDAQFSPYVSGMPFSPTLSPGYSPSSP---- 1548
Query: 317 STGYSPSQPGYSPSSTSQYTP 255
GYSPS PGYSP+S Y+P
Sbjct: 1549 --GYSPSSPGYSPTSPG-YSP 1566
[5][TOP]
>UniRef100_A7NVN8 Chromosome chr18 scaffold_1, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7NVN8_VITVI
Length = 89
Score = 138 bits (347), Expect = 2e-31
Identities = 63/76 (82%), Positives = 71/76 (93%)
Frame = -3
Query: 464 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGY 285
+S + SPTSPSYSPTSPSYSP+SPTYSP+SPYNSGVSPDYSPSSPQ+SPS GYSPS PGY
Sbjct: 9 SSYSCSPTSPSYSPTSPSYSPASPTYSPTSPYNSGVSPDYSPSSPQYSPSAGYSPSAPGY 68
Query: 284 SPSSTSQYTPQTNDQD 237
SPSSTSQYTPQ +++D
Sbjct: 69 SPSSTSQYTPQMSNKD 84
[6][TOP]
>UniRef100_Q56Z04 DNA-directed RNA polymerase II largest chain (Fragment) n=1
Tax=Arabidopsis thaliana RepID=Q56Z04_ARATH
Length = 99
Score = 137 bits (346), Expect = 3e-31
Identities = 64/85 (75%), Positives = 71/85 (83%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P+SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY+SG SPDYSPS+ GY
Sbjct: 8 PASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-------GY 60
Query: 305 SPSQPGYSPSSTSQYTPQTNDQDER 231
SP+ PGYSPSST QYTP D+ ++
Sbjct: 61 SPTLPGYSPSSTGQYTPHEGDKKDK 85
[7][TOP]
>UniRef100_P18616 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Arabidopsis
thaliana RepID=RPB1_ARATH
Length = 1840
Score = 137 bits (346), Expect = 3e-31
Identities = 64/85 (75%), Positives = 71/85 (83%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P+SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY+SG SPDYSPS+ GY
Sbjct: 1749 PASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-------GY 1801
Query: 305 SPSQPGYSPSSTSQYTPQTNDQDER 231
SP+ PGYSPSST QYTP D+ ++
Sbjct: 1802 SPTLPGYSPSSTGQYTPHEGDKKDK 1826
Score = 112 bits (280), Expect = 1e-23
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 8/87 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1645 PTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 1704
Query: 311 GYSPSQPGYSPSSTS------QYTPQT 249
GYSP+ P YSP+S S Y PQ+
Sbjct: 1705 GYSPTSPSYSPTSPSYGPTSPSYNPQS 1731
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1638 PTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1697
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ PGYSP+S S Y+P
Sbjct: 1698 AYSPTSPGYSPTSPS-YSP 1715
Score = 111 bits (277), Expect = 3e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1589 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 1648
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1649 AYSPTSPAYSPTSPS-YSP 1666
Score = 110 bits (276), Expect = 4e-23
Identities = 56/79 (70%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S SP YSP+SP +SP S
Sbjct: 1547 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 1606
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1607 SYSPTSPSYSPTSPS-YSP 1624
Score = 110 bits (275), Expect = 5e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1582 PSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1641
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1642 AYSPTSPAYSPTSPA-YSP 1659
Score = 110 bits (275), Expect = 5e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1610 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSP 1669
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1670 SYSPTSPSYSPTSPS-YSP 1687
Score = 107 bits (268), Expect = 3e-22
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSP 1718
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y P+ P Y+P S ++Y+P
Sbjct: 1719 SYGPTSPSYNPQS-AKYSP 1736
Score = 107 bits (267), Expect = 4e-22
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1575 PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1634
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1635 SYSPTSPAYSPTSPA-YSP 1652
Score = 105 bits (263), Expect = 1e-21
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSP+SP YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1568 PTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1627
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1628 SYSPTSPSYSPTSPA-YSP 1645
Score = 102 bits (254), Expect = 1e-20
Identities = 52/78 (66%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
SSP YSP+SP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1541 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 1600
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1601 YSPTSPSYSPTSPS-YSP 1617
Score = 99.4 bits (246), Expect = 1e-19
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1596 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSP 1655
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1656 AYSPTSPSYSPTSPSYSPTSPS-YSP 1680
Score = 99.4 bits (246), Expect = 1e-19
Identities = 52/98 (53%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF----- 324
P+SP YSPTSP+YSPTSPSYSPTSP+YSP+SP YSP+SP S SP Y P+SP +
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSA 1732
Query: 323 ---------------SPSTGYSPSQPGYSPSSTSQYTP 255
SP++ YSP+ P YSP+S S Y+P
Sbjct: 1733 KYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPS-YSP 1769
Score = 98.2 bits (243), Expect = 2e-19
Identities = 52/85 (61%), Positives = 63/85 (74%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1617 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSP 1676
Query: 311 GYSPSQP---GYSPS---STSQYTP 255
YSP+ P SPS ++ Y+P
Sbjct: 1677 SYSPTSPSYSPTSPSYSPTSPAYSP 1701
Score = 97.8 bits (242), Expect = 3e-19
Identities = 53/86 (61%), Positives = 64/86 (74%), Gaps = 7/86 (8%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS---SPYNSGVSP--DYSPSSPQF 324
P+SP YSPTSP+YSPTSPSY PTSPSY+P S YSPS SP N+ +SP YSP+SP +
Sbjct: 1701 PTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNY 1760
Query: 323 SP-STGYSPSQPGYSPSSTSQYTPQT 249
SP S YSP+ P YSPSS + Y+P +
Sbjct: 1761 SPTSPSYSPTSPSYSPSSPT-YSPSS 1785
Score = 97.1 bits (240), Expect = 6e-19
Identities = 53/86 (61%), Positives = 62/86 (72%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP YSPTSP+YS P+SP YSP+SP S SP YSP+SP
Sbjct: 1554 PTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSP 1613
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1614 SYSPTSPSYSPTSPSYSPTSPS-YSP 1638
Score = 84.3 bits (207), Expect = 4e-15
Identities = 43/76 (56%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYS 303
SPY +SP YSP+SP YSP+SP YSP+SP S SP YSP+SP +SPS+ GYS
Sbjct: 1529 SPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS 1588
Query: 302 PSQPGYSPSSTSQYTP 255
P+ P YSP+S S Y+P
Sbjct: 1589 PTSPAYSPTSPS-YSP 1603
[8][TOP]
>UniRef100_Q6ZJR1 DNA-directed RNA polymerase largest chain-like protein n=1
Tax=Oryza sativa Japonica Group RepID=Q6ZJR1_ORYSJ
Length = 138
Score = 124 bits (312), Expect = 2e-27
Identities = 59/85 (69%), Positives = 70/85 (82%), Gaps = 3/85 (3%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY--NSGVSPDYSPSSPQFSPSTGY 306
SPYS TSPNYSPTSP+YSPTSPSYS SP+YSP+SPY + G SPDYSP+SP +SPS Y
Sbjct: 50 SPYSQTSPNYSPTSPTYSPTSPSYSQPSPSYSPTSPYTTSGGPSPDYSPTSPNYSPSGSY 109
Query: 305 SPSQPGYSPSST-SQYTPQTNDQDE 234
SP+ PGYSPSST Q++PQ D+D+
Sbjct: 110 SPTAPGYSPSSTGQQFSPQAADKDK 134
[9][TOP]
>UniRef100_B9FZ51 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9FZ51_ORYSJ
Length = 1526
Score = 124 bits (312), Expect = 2e-27
Identities = 59/85 (69%), Positives = 70/85 (82%), Gaps = 3/85 (3%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY--NSGVSPDYSPSSPQFSPSTGY 306
SPYS TSPNYSPTSP+YSPTSPSYS SP+YSP+SPY + G SPDYSP+SP +SPS Y
Sbjct: 1438 SPYSQTSPNYSPTSPTYSPTSPSYSQPSPSYSPTSPYTTSGGPSPDYSPTSPNYSPSGSY 1497
Query: 305 SPSQPGYSPSST-SQYTPQTNDQDE 234
SP+ PGYSPSST Q++PQ D+D+
Sbjct: 1498 SPTAPGYSPSSTGQQFSPQAADKDK 1522
Score = 114 bits (284), Expect = 4e-24
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1328 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1387
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ PGYSP+S S Y+P
Sbjct: 1388 AYSPTSPGYSPTSPS-YSP 1405
Score = 110 bits (276), Expect = 4e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1279 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSP 1338
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1339 SYSPTSPSYSPTSPS-YSP 1356
Score = 110 bits (276), Expect = 4e-23
Identities = 54/79 (68%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1349 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSP 1408
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+PSS ++Y+P
Sbjct: 1409 NYSPTSPSYNPSS-AKYSP 1426
Score = 108 bits (271), Expect = 1e-22
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1258 PGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1317
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1318 VYSPTSPAYSPTSPA-YSP 1335
Score = 108 bits (270), Expect = 2e-22
Identities = 52/78 (66%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
P YSPTSP+YSP SPSYSPTSPSY+P SPTYSP+SP S SP YSP+SP +SP S
Sbjct: 1231 PGPGYSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1290
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1291 YSPTSPSYSPTSPS-YSP 1307
Score = 108 bits (269), Expect = 2e-22
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1314 PTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1373
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1374 SYSPTSPSYSPTSPA-YSP 1391
Score = 107 bits (268), Expect = 3e-22
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1300 PTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSP 1359
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1360 SYSPTSPSYSPTSPS-YSP 1377
Score = 105 bits (261), Expect = 2e-21
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP Y+P SP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1251 PTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1310
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1311 SYSPTSPVYSPTSPA-YSP 1328
Score = 105 bits (261), Expect = 2e-21
Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSPTSP+YSPTSP YSP+SP+YSP+SP S SP Y+PSS ++SPS
Sbjct: 1370 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYSPSHA 1429
Query: 308 YSPSQPGYSPSS--TSQYTP 255
YSPS P SP S + Y+P
Sbjct: 1430 YSPSSPRLSPYSQTSPNYSP 1449
Score = 102 bits (253), Expect = 2e-20
Identities = 51/73 (69%), Positives = 61/73 (83%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSPTSPSYSPTSP+YSP+SP YSP+SP S SP+YSP+SP ++PS+
Sbjct: 1363 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSA 1422
Query: 308 -YSPSQPGYSPSS 273
YSPS YSPSS
Sbjct: 1423 KYSPSH-AYSPSS 1434
Score = 101 bits (251), Expect = 3e-20
Identities = 49/78 (62%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
PSSP P YSPTSPSYSP SPSYSP+SP+Y+P SP S SP YSP+SP +SP S
Sbjct: 1224 PSSPVYSPGPGYSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPS 1283
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1284 YSPTSPSYSPTSPS-YSP 1300
Score = 99.4 bits (246), Expect = 1e-19
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1286 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSP 1345
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1346 SYSPTSPSYSPTSPSYSPTSPS-YSP 1370
Score = 99.0 bits (245), Expect = 1e-19
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1265 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSP 1324
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1325 AYSPTSPAYSPTSPSYSPTSPS-YSP 1349
Score = 99.0 bits (245), Expect = 1e-19
Identities = 55/88 (62%), Positives = 65/88 (73%), Gaps = 9/88 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1335 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 1394
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTPQT 249
+SP S YSP+ P YSP+S S Y P +
Sbjct: 1395 GYSPTSPSYSPTSPNYSPTSPS-YNPSS 1421
Score = 85.5 bits (210), Expect = 2e-15
Identities = 45/79 (56%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSPYSPTSPN-YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PS Y+P+S YSP+SP YSP P YSP+SP+YSP+SP S SP Y+P SP +SP S
Sbjct: 1210 PSPGYTPSSGGGYSPSSPVYSP-GPGYSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTSP 1268
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1269 SYSPTSPSYSPTSPS-YSP 1286
Score = 53.1 bits (126), Expect = 9e-06
Identities = 38/89 (42%), Positives = 46/89 (51%), Gaps = 14/89 (15%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGV------SPDY--------S 342
SP S T + SPSY SP+ S T + SPY G+ SP Y S
Sbjct: 1165 SPISGTPYHEGMMSPSYL-LSPNIRASPITDAQFSPYVGGMAFSPVPSPGYTPSSGGGYS 1223
Query: 341 PSSPQFSPSTGYSPSQPGYSPSSTSQYTP 255
PSSP +SP GYSP+ P YSP+S S Y+P
Sbjct: 1224 PSSPVYSPGPGYSPTSPSYSPASPS-YSP 1251
[10][TOP]
>UniRef100_C5YGY9 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5YGY9_SORBI
Length = 1857
Score = 117 bits (294), Expect = 3e-25
Identities = 56/84 (66%), Positives = 68/84 (80%), Gaps = 2/84 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS--GVSPDYSPSSPQFSPSTGY 306
+PYS TSP+YSPTSP+YSPTSPSYS SP+YSP+SP+N+ G SPDYSP+SP +SPS Y
Sbjct: 1774 TPYSQTSPSYSPTSPTYSPTSPSYSQPSPSYSPTSPFNTSGGPSPDYSPTSPNYSPSGSY 1833
Query: 305 SPSQPGYSPSSTSQYTPQTNDQDE 234
SP+ PGYSPSST Q ND+D+
Sbjct: 1834 SPTAPGYSPSSTG----QGNDKDD 1853
Score = 114 bits (284), Expect = 4e-24
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1664 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1723
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ PGYSP+S S Y+P
Sbjct: 1724 AYSPTSPGYSPTSPS-YSP 1741
Score = 110 bits (276), Expect = 4e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1615 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSP 1674
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1675 SYSPTSPSYSPTSPS-YSP 1692
Score = 110 bits (276), Expect = 4e-23
Identities = 54/79 (68%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1685 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSP 1744
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+PSS ++Y+P
Sbjct: 1745 SYSPTSPSYNPSS-AKYSP 1762
Score = 110 bits (274), Expect = 6e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1608 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSP 1667
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1668 AYSPTSPSYSPTSPS-YSP 1685
Score = 109 bits (273), Expect = 8e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSPNYSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1587 PGSPTYSPTSPNYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1646
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1647 SYSPTSPVYSPTSPA-YSP 1664
Score = 108 bits (269), Expect = 2e-22
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1650 PTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1709
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1710 SYSPTSPSYSPTSPA-YSP 1727
Score = 107 bits (268), Expect = 3e-22
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1636 PTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSP 1695
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1696 SYSPTSPSYSPTSPS-YSP 1713
Score = 106 bits (264), Expect = 9e-22
Identities = 51/78 (65%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
P YSP SP+YSP SPSYSPTSPSY+P SPTYSP+SP S SP YSP+SP +SP S
Sbjct: 1560 PEKGYSPLSPSYSPASPSYSPTSPSYTPGSPTYSPTSPNYSPTSPTYSPTSPSYSPTSPS 1619
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1620 YSPTSPSYSPTSPS-YSP 1636
Score = 103 bits (258), Expect = 5e-21
Identities = 50/80 (62%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSPTSP+YSPTSP YSP+SP+YSP+SP S SP Y+PSS ++SPS
Sbjct: 1706 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSHA 1765
Query: 308 YSPSQPGYSPSS--TSQYTP 255
YSPS P +P S + Y+P
Sbjct: 1766 YSPSSPRMTPYSQTSPSYSP 1785
Score = 102 bits (255), Expect = 1e-20
Identities = 48/73 (65%), Positives = 59/73 (80%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP Y+P SP YSPTSP+YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1580 PTSPSYTPGSPTYSPTSPNYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1639
Query: 311 GYSPSQPGYSPSS 273
YSP+ P YSP+S
Sbjct: 1640 SYSPTSPSYSPTS 1652
Score = 102 bits (254), Expect = 1e-20
Identities = 56/88 (63%), Positives = 66/88 (75%), Gaps = 9/88 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1671 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 1730
Query: 311 GYSPSQP-------GYSPSSTSQYTPQT 249
GYSP+ P YSP+S S Y P +
Sbjct: 1731 GYSPTSPSYSPTSPSYSPTSPS-YNPSS 1757
Score = 101 bits (252), Expect = 2e-20
Identities = 51/73 (69%), Positives = 60/73 (82%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSPTSPSYSPTSP+YSP+SP YSP+SP S SP YSP+SP ++PS+
Sbjct: 1699 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSA 1758
Query: 308 -YSPSQPGYSPSS 273
YSPS YSPSS
Sbjct: 1759 KYSPSH-AYSPSS 1770
Score = 99.4 bits (246), Expect = 1e-19
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1594 PTSPNYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1653
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1654 VYSPTSPAYSPTSPAYSPTSPS-YSP 1678
Score = 99.4 bits (246), Expect = 1e-19
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1622 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSP 1681
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1682 SYSPTSPSYSPTSPSYSPTSPS-YSP 1706
Score = 95.9 bits (237), Expect = 1e-18
Identities = 47/78 (60%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
PSSP YSP SPSYSP SPSYSP+SP+Y+P SP S SP+YSP+SP +SP S
Sbjct: 1553 PSSPVFTPEKGYSPLSPSYSPASPSYSPTSPSYTPGSPTYSPTSPNYSPTSPTYSPTSPS 1612
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1613 YSPTSPSYSPTSPS-YSP 1629
Score = 94.7 bits (234), Expect = 3e-18
Identities = 50/82 (60%), Positives = 62/82 (75%), Gaps = 5/82 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+Y+P SP+YSPTSP+YSP+SPTYSP+SP S SP YSP+SP +SP+
Sbjct: 1573 PASPSYSPTSPSYTPGSPTYSPTSPNYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPT-- 1630
Query: 308 YSPSQP----GYSPSSTSQYTP 255
SPS YSP+S S Y+P
Sbjct: 1631 -SPSYSPTSPSYSPTSPS-YSP 1650
Score = 88.2 bits (217), Expect = 3e-16
Identities = 46/80 (57%), Positives = 57/80 (71%), Gaps = 7/80 (8%)
Frame = -3
Query: 473 YSPTSPNYSPTSP------SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
YSP+S YSP+SP YSP SPSYSP+SP+YSP+SP + SP YSP+SP +SP S
Sbjct: 1544 YSPSSGGYSPSSPVFTPEKGYSPLSPSYSPASPSYSPTSPSYTPGSPTYSPTSPNYSPTS 1603
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1604 PTYSPTSPSYSPTSPS-YSP 1622
[11][TOP]
>UniRef100_P35084 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Dictyostelium
discoideum RepID=RPB1_DICDI
Length = 1727
Score = 117 bits (292), Expect = 5e-25
Identities = 59/87 (67%), Positives = 70/87 (80%), Gaps = 5/87 (5%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSPSSP +SPS+
Sbjct: 1639 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSP 1698
Query: 311 GYSPSQPGYSPSS---TSQYTPQTNDQ 240
YSPS P YSPSS T++Y Q N++
Sbjct: 1699 SYSPSSPSYSPSSPTFTNKYNYQPNNK 1725
Score = 115 bits (287), Expect = 2e-24
Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1632 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP 1691
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSPS P YSPSS S Y+P +
Sbjct: 1692 SYSPSSPSYSPSSPS-YSPSS 1711
Score = 114 bits (285), Expect = 3e-24
Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1625 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1684
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSPS P YSPSS S Y+P +
Sbjct: 1685 SYSPSSPSYSPSSPS-YSPSS 1704
Score = 113 bits (283), Expect = 6e-24
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1562 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSP 1621
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1622 SYSPTSPSYSPTSPS-YSP 1639
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1597 PTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1656
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1657 SYSPTSPSYSPTSPS-YSP 1674
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1604 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1663
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1664 SYSPTSPSYSPTSPS-YSP 1681
Score = 110 bits (274), Expect = 6e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1548 PQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSP 1607
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1608 SYSPTSPSYSPTSPS-YSP 1625
Score = 110 bits (274), Expect = 6e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1590 PTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1649
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1650 SYSPTSPSYSPTSPS-YSP 1667
Score = 109 bits (272), Expect = 1e-22
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1583 PTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1642
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1643 SYSPTSPSYSPTSPS-YSP 1660
Score = 103 bits (256), Expect = 8e-21
Identities = 51/77 (66%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S Y P SP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1543 SYQYFPQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFY 1602
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1603 SPTSPSYSPTSPS-YSP 1618
Score = 102 bits (253), Expect = 2e-20
Identities = 56/88 (63%), Positives = 66/88 (75%), Gaps = 9/88 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1611 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1670
Query: 311 GYSPSQP-------GYSPSSTSQYTPQT 249
YSP+ P YSPSS S Y+P +
Sbjct: 1671 SYSPTSPSYSPTSPSYSPSSPS-YSPSS 1697
Score = 89.4 bits (220), Expect = 1e-16
Identities = 44/71 (61%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = -3
Query: 464 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPG 288
+S Y P SP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P
Sbjct: 1542 SSYQYFPQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPF 1601
Query: 287 YSPSSTSQYTP 255
YSP+S S Y+P
Sbjct: 1602 YSPTSPS-YSP 1611
[12][TOP]
>UniRef100_Q75A34 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Eremothecium
gossypii RepID=RPB1_ASHGO
Length = 1745
Score = 116 bits (291), Expect = 7e-25
Identities = 58/90 (64%), Positives = 70/90 (77%), Gaps = 2/90 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 311 GYSPSQPGYSPSSTSQYTPQTNDQDERGQD 222
YSP+ P YSP S S Y+P N+ D+ +D
Sbjct: 1712 SYSPTSPQYSPRSPS-YSPSFNNNDKEQKD 1740
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1547 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1606
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1607 SYSPTSPSYSPTSPS-YSP 1624
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1568 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1627
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1628 SYSPTSPSYSPTSPS-YSP 1645
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1589 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1648
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1649 SYSPTSPSYSPTSPS-YSP 1666
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1610 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1669
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1670 SYSPTSPSYSPTSPS-YSP 1687
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1631 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1691 SYSPTSPSYSPTSPS-YSP 1708
Score = 107 bits (267), Expect = 4e-22
Identities = 54/78 (69%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
SSP +SPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1541 SSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1600
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1601 YSPTSPSYSPTSPS-YSP 1617
Score = 102 bits (255), Expect = 1e-20
Identities = 54/87 (62%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQ------ 1719
Query: 308 YSPSQPGYSPSSTSQYTPQTNDQDERG 228
YSP P YSPS + Q +DE G
Sbjct: 1720 YSPRSPSYSPSFNNNDKEQ---KDENG 1743
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1554 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1613
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1614 SYSPTSPSYSPTSPSYSPTSPS-YSP 1638
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1575 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1634
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1635 SYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1596 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1655
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1656 SYSPTSPSYSPTSPSYSPTSPS-YSP 1680
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1617 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1676
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1677 SYSPTSPSYSPTSPSYSPTSPS-YSP 1701
[13][TOP]
>UniRef100_B0XAQ9 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
RepID=B0XAQ9_CULQU
Length = 1874
Score = 115 bits (289), Expect = 1e-24
Identities = 54/78 (69%), Positives = 65/78 (83%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
P+SPYSPTSP+YSPTSP+YSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P+T
Sbjct: 1650 PTSPYSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPS 1709
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSPSS Y+P
Sbjct: 1710 YSPTSPNYSPSS-PHYSP 1726
Score = 108 bits (270), Expect = 2e-22
Identities = 51/81 (62%), Positives = 61/81 (75%), Gaps = 5/81 (6%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYS 303
S YSPTSP+YSPTSP+YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP+ Y+
Sbjct: 1576 SPGYSPTSPSYSPTSPNYSPTSPRYSPTSPNYSPTSPNYSPTSPSYSPTSPLYSPTATYA 1635
Query: 302 PSQPGYSPSS-----TSQYTP 255
PS P YSP+S TS Y+P
Sbjct: 1636 PSSPAYSPTSPSYSPTSPYSP 1656
Score = 107 bits (268), Expect = 3e-22
Identities = 53/81 (65%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSP+SPSYSP+SP+YSP+SP S SP+Y+P++P +SP S
Sbjct: 1656 PTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSPTSP 1715
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSPS P YSP+S S Y+P +
Sbjct: 1716 NYSPSSPHYSPTSPS-YSPSS 1735
Score = 107 bits (268), Expect = 3e-22
Identities = 52/79 (65%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSP+SPSYSPTSPSYSP+SP+YSP+SP + +P YSP+SP +SPS+
Sbjct: 1663 PTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPNYSPSSP 1722
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSPSS +Y+P
Sbjct: 1723 HYSPTSPSYSPSS-PKYSP 1740
Score = 106 bits (264), Expect = 9e-22
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP+Y+P +PSYSP+SP YSPSSP+ S SP YSPSSP++SP S
Sbjct: 1684 PTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPTSP 1743
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y S QYTP
Sbjct: 1744 SYSPTSPSYGGS--PQYTP 1760
Score = 105 bits (261), Expect = 2e-21
Identities = 54/86 (62%), Positives = 63/86 (73%), Gaps = 7/86 (8%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP------TYSPSSPYNSGVSPDYSPSSPQ 327
P+SP YSPTSPNYSPTSP+YSPTSPSYSP+SP TY+PSSP S SP YSP+SP
Sbjct: 1595 PTSPRYSPTSPNYSPTSPNYSPTSPSYSPTSPLYSPTATYAPSSPAYSPTSPSYSPTSPY 1654
Query: 326 FSPSTGYSPSQPGYSPSSTSQYTPQT 249
S YSP+ P YSP+S S Y+P +
Sbjct: 1655 SPTSPSYSPTSPAYSPTSPS-YSPSS 1679
Score = 104 bits (259), Expect = 3e-21
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSP+YSP+SP+YSPSSP S SP YSP+SP +SP S
Sbjct: 1643 PTSPSYSPTSP-YSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSP 1701
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
Y+P+ P YSP+S + Y+P +
Sbjct: 1702 NYTPATPSYSPTSPN-YSPSS 1721
Score = 104 bits (259), Expect = 3e-21
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS------GVSPDYSPSSPQ 327
P++P YSPTSPNYSP+SP YSPTSPSYSPSSP YSP+SP S G SP Y+P+SPQ
Sbjct: 1705 PATPSYSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPTSPSYSPTSPSYGGSPQYTPASPQ 1764
Query: 326 FSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSPSS Q++P
Sbjct: 1765 YSPTSPKYSPTSPSYSPSS-PQHSP 1788
Score = 103 bits (256), Expect = 8e-21
Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP+YSPTSP YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1636 PSSPAYSPTSPSYSPTSP-YSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSP 1694
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P +T Y+P
Sbjct: 1695 SYSPTSPNYTP-ATPSYSP 1712
Score = 102 bits (253), Expect = 2e-20
Identities = 57/85 (67%), Positives = 63/85 (74%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSP------SSPTYSPSSPYNSGVSPDYSPSSPQ 327
P+SP YSPTSPNYSPTSPSYSPTSP YSP SSP YSP+SP S SP YSP+SP
Sbjct: 1602 PTSPNYSPTSPNYSPTSPSYSPTSPLYSPTATYAPSSPAYSPTSPSYSPTSP-YSPTSPS 1660
Query: 326 FSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSPSS S Y+P
Sbjct: 1661 YSPTSPAYSPTSPSYSPSSPS-YSP 1684
Score = 100 bits (250), Expect = 4e-20
Identities = 51/85 (60%), Positives = 63/85 (74%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 318
P+SP YSPTSPNY+P +PSYSPTSP+YSPSSP YSP+SP S SP YSP+SP +SP
Sbjct: 1691 PTSPSYSPTSPNYTPATPSYSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPTSPSYSPTSP 1750
Query: 317 ----STGYSPSQPGYSPSSTSQYTP 255
S Y+P+ P YSP+S +Y+P
Sbjct: 1751 SYGGSPQYTPASPQYSPTS-PKYSP 1774
Score = 96.3 bits (238), Expect = 9e-19
Identities = 48/74 (64%), Positives = 58/74 (78%), Gaps = 2/74 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP+YSP+SP YSPTSPSYSP+SP+Y SP + SP YSP+SP++SP S
Sbjct: 1719 PSSPHYSPTSPSYSPSSPKYSPTSPSYSPTSPSYG-GSPQYTPASPQYSPTSPKYSPTSP 1777
Query: 311 GYSPSQPGYSPSST 270
YSPS P +SP S+
Sbjct: 1778 SYSPSSPQHSPGSS 1791
Score = 94.0 bits (232), Expect = 5e-18
Identities = 51/97 (52%), Positives = 64/97 (65%), Gaps = 10/97 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSY------SPSSPTYSPSSPYNSGVSPDYSPSSPQ 327
P+SP YSP+SP YSPTSPSYSPTSPSY +P+SP YSP+SP S SP YSPSSPQ
Sbjct: 1726 PTSPSYSPSSPKYSPTSPSYSPTSPSYGGSPQYTPASPQYSPTSPKYSPTSPSYSPSSPQ 1785
Query: 326 FSP---STGYSPSQPGYSPSSTSQYTPQTNDQDERGQ 225
SP + + + P YSP +T++Y+P + Q
Sbjct: 1786 HSPGSSGSNFMVNSPTYSP-TTARYSPNMSSYSPGSQ 1821
Score = 86.7 bits (213), Expect = 7e-16
Identities = 53/115 (46%), Positives = 69/115 (60%), Gaps = 27/115 (23%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSP---------SSPTYSPS--------SPYNSG 360
P+SP YSPTSP YSPTSPSYSP+SP +SP +SPTYSP+ S Y+ G
Sbjct: 1760 PASPQYSPTSPKYSPTSPSYSPSSPQHSPGSSGSNFMVNSPTYSPTTARYSPNMSSYSPG 1819
Query: 359 ------VSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQ--YTPQTNDQDERGQD 222
SP Y+P+SP +SPS+ YSP+ GYSPSS + Y+P + ++ D
Sbjct: 1820 SQKYSPTSPVYTPTSPHYSPSSPAYSPTGQGYSPSSPASPTYSPTSPSYEDSVDD 1874
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/90 (52%), Positives = 59/90 (65%), Gaps = 11/90 (12%)
Frame = -3
Query: 485 PSSP-----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 321
PSSP YSP+SPNY+ SP + SP YSP+SP+YSP+SP S SP YSP+SP +S
Sbjct: 1551 PSSPSASPSYSPSSPNYAAASPGGA--SPGYSPTSPSYSPTSPNYSPTSPRYSPTSPNYS 1608
Query: 320 P-STGYSPSQPGYSPSS-----TSQYTPQT 249
P S YSP+ P YSP+S T+ Y P +
Sbjct: 1609 PTSPNYSPTSPSYSPTSPLYSPTATYAPSS 1638
Score = 63.9 bits (154), Expect = 5e-09
Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPT--------SPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P S +P P++SP+ SPS+SP S S P+ SP P + SP YSPSSP
Sbjct: 1506 PPSGMTPGGPSFSPSAQSDASGMSPSWSPMPGSPSSPGPSMSPYFPSSPSASPSYSPSSP 1565
Query: 329 QFS------PSTGYSPSQPGYSPSSTSQYTP 255
++ S GYSP+ P YSP+S + Y+P
Sbjct: 1566 NYAAASPGGASPGYSPTSPSYSPTSPN-YSP 1595
[14][TOP]
>UniRef100_C5DXL0 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DXL0_ZYGRC
Length = 1744
Score = 115 bits (287), Expect = 2e-24
Identities = 57/96 (59%), Positives = 72/96 (75%), Gaps = 8/96 (8%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1704
Query: 311 GYSPSQPGYSPSS------TSQYTPQTNDQDERGQD 222
YSP+ P YSP+S + Y+P + QD+R +D
Sbjct: 1705 SYSPTSPSYSPTSPNYSPGSPTYSPSSPKQDDREKD 1740
Score = 113 bits (283), Expect = 6e-24
Identities = 57/88 (64%), Positives = 68/88 (77%), Gaps = 2/88 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1659 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1718
Query: 311 GYSPSQPGYSPSSTSQYTPQTNDQDERG 228
YSP P YSPSS P+ +D+++ G
Sbjct: 1719 NYSPGSPTYSPSS-----PKQDDREKDG 1741
Score = 112 bits (279), Expect = 2e-23
Identities = 54/78 (69%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
PS YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1562 PSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1621
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1622 YSPTSPSYSPTSPS-YSP 1638
Score = 112 bits (279), Expect = 2e-23
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSP+SP +SP S
Sbjct: 1624 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP 1683
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1684 SYSPTSPSYSPTSPS-YSP 1701
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1582 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1641
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1642 SYSPTSPSYSPTSPS-YSP 1659
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1603 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1662
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1663 SYSPTSPNYSPTSPS-YSP 1680
Score = 111 bits (277), Expect = 3e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP SPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1554 PTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1613
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1614 SYSPTSPSYSPTSPS-YSP 1631
Score = 109 bits (272), Expect = 1e-22
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP+YSPTSPSYSP SP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1540 PSSPTYSPTSPSYSPTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1599
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1600 SYSPTSPSYSPTSPS-YSP 1617
Score = 105 bits (262), Expect = 2e-21
Identities = 53/78 (67%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
SSP +SP+SP YSPTSPSYSPTSPSYSP SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1534 SSPGFSPSSPTYSPTSPSYSPTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1593
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1594 YSPTSPSYSPTSPS-YSP 1610
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1568 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1627
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1628 SYSPTSPSYSPTSPSYSPTSPS-YSP 1652
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1610 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1669
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1670 NYSPTSPSYSPTSPSYSPTSPS-YSP 1694
Score = 100 bits (248), Expect = 7e-20
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1589 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1648
Query: 311 GYSPSQP---GYSPS---STSQYTP 255
YSP+ P SPS ++ Y+P
Sbjct: 1649 SYSPTSPSYSPTSPSYSPTSPNYSP 1673
[15][TOP]
>UniRef100_UPI00019270E9 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 2 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270E9
Length = 2014
Score = 114 bits (286), Expect = 3e-24
Identities = 58/79 (73%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSPSSPQ+SP S
Sbjct: 1701 PTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSP 1760
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP P YSPSS S Y+P
Sbjct: 1761 AYSPQSPSYSPSSPS-YSP 1778
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1624 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1684 SYSPTSPSYSPTSPS-YSP 1701
Score = 111 bits (277), Expect = 3e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1610 PTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1669
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1670 SYSPTSPSYSPTSPS-YSP 1687
Score = 111 bits (277), Expect = 3e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSP 1725
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1726 SYSPTSPKYSPTSPS-YSP 1743
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP++
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1704
Query: 308 -YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1705 IYSPTSPSYSPTSPS-YSP 1722
Score = 110 bits (275), Expect = 5e-23
Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1687 PTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSP 1746
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSPS P YSP+S + Y+PQ+
Sbjct: 1747 SYSPSSPQYSPTSPA-YSPQS 1766
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1603 PTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1662
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1663 SYSPTSPSYSPTSPS-YSP 1680
Score = 110 bits (274), Expect = 6e-23
Identities = 55/81 (67%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1694 PTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSP 1753
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSP S S Y+P +
Sbjct: 1754 QYSPTSPAYSPQSPS-YSPSS 1773
Score = 110 bits (274), Expect = 6e-23
Identities = 55/79 (69%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP YSPTSPSYSPSSP+YSPSSP S SP YSP+SP +SP S
Sbjct: 1778 PTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSP 1837
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1838 AYSPTSPAYSPTSPA-YSP 1855
Score = 109 bits (273), Expect = 8e-23
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1596 PTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1655
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1656 SYSPTSPSYSPTSPS-YSP 1673
Score = 109 bits (272), Expect = 1e-22
Identities = 56/79 (70%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSPSSP YSP+SP S SP YSPSSP +SP S
Sbjct: 1722 PTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSP 1781
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1782 KYSPTSPKYSPTS-PKYSP 1799
Score = 108 bits (270), Expect = 2e-22
Identities = 55/79 (69%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP YSPTSP YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1589 PSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSP 1648
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1649 SYSPTSPSYSPTSPS-YSP 1666
Score = 108 bits (270), Expect = 2e-22
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP YSPTSP+YSP SPSYSPSSP+YSP+SP S SP YSP+SP++SP S
Sbjct: 1743 PTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSP 1802
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS P YSPSS + Y+P
Sbjct: 1803 SYSPSSPSYSPSSPN-YSP 1820
Score = 107 bits (268), Expect = 3e-22
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP YSPTSP YSPTSP YSP+SP+YSPSSP S SP+YSP+SP +SP S
Sbjct: 1771 PSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSP 1830
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1831 TYSPTSPAYSPTSPA-YSP 1848
Score = 107 bits (266), Expect = 5e-22
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SPNYSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1806 PSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSP 1865
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1866 AYSPTSPKYSPTS-PKYSP 1883
Score = 105 bits (263), Expect = 1e-21
Identities = 57/106 (53%), Positives = 67/106 (63%), Gaps = 29/106 (27%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 318
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP++SP
Sbjct: 1820 PTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSPKYSPTSP 1879
Query: 317 -------------------STGYSPSQPGYSPSS------TSQYTP 255
STGYSP+ P YSPSS T QY+P
Sbjct: 1880 KYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSP 1925
Score = 105 bits (262), Expect = 2e-21
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSP SP+YSP+SPSYSPTSP YSP+SP YSP+SP S SP YSPSSP +SPS+
Sbjct: 1757 PTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSP 1816
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1817 NYSPTSPTYSPTSPT-YSP 1834
Score = 104 bits (259), Expect = 3e-21
Identities = 51/79 (64%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP+YSP+SP+YSPTSP+YSP+SPTYSP+SP S SP YSP+SP +SP S
Sbjct: 1799 PTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSP 1858
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1859 VYSPTSPAYSPTS-PKYSP 1876
Score = 102 bits (253), Expect = 2e-20
Identities = 51/79 (64%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP SP+SP YSPTSP YSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1582 PQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSP 1641
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1642 SYSPTSPSYSPTSPS-YSP 1659
Score = 101 bits (252), Expect = 2e-20
Identities = 55/85 (64%), Positives = 64/85 (75%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSP 1732
Query: 311 GYSPSQP---GYSPS---STSQYTP 255
YSP+ P SPS S+ QY+P
Sbjct: 1733 KYSPTSPSYSPTSPSYSPSSPQYSP 1757
Score = 101 bits (251), Expect = 3e-20
Identities = 54/88 (61%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSG---VSPDYSPSSP 330
P+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP ++G SP+YSPSSP
Sbjct: 1855 PTSPVYSPTSPAYSPTSPKYSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSP 1914
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTPQT 249
++SP+T YSP+ P YSP+S + Y+P T
Sbjct: 1915 KYSPTTPQYSPTSPKYSPASPT-YSPST 1941
Score = 100 bits (250), Expect = 4e-20
Identities = 56/88 (63%), Positives = 66/88 (75%), Gaps = 9/88 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYS-------PTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYS PTSP+YSP SP+YSPSSP S SP YSP+SP
Sbjct: 1729 PTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSP 1788
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTPQT 249
++SP S YSP+ P YSPSS S Y+P +
Sbjct: 1789 KYSPTSPKYSPTSPSYSPSSPS-YSPSS 1815
Score = 100 bits (250), Expect = 4e-20
Identities = 56/99 (56%), Positives = 63/99 (63%), Gaps = 13/99 (13%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP YSPTS YSPTSP YSPSSP YSP++P S SP YSP+SP +SPST
Sbjct: 1883 PTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPSTP 1942
Query: 311 --------GYSPSQPGYSPSSTSQYTPQ---TNDQDERG 228
YSP +P YSP T Y+P T D RG
Sbjct: 1943 TDKSVGSINYSPLEPDYSP-GTPTYSPDGTPTYSPDGRG 1980
Score = 99.4 bits (246), Expect = 1e-19
Identities = 53/85 (62%), Positives = 65/85 (76%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSP 1711
Query: 311 GYSPSQP---GYSPS---STSQYTP 255
YSP+ P SPS ++ +Y+P
Sbjct: 1712 SYSPTSPSYSPTSPSYSPTSPKYSP 1736
Score = 99.0 bits (245), Expect = 1e-19
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1631 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1691 SYSPTSPSYSPTSPIYSPTSPS-YSP 1715
Score = 98.2 bits (243), Expect = 2e-19
Identities = 54/86 (62%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSP YS P+SP+YSPSSP S SP YSP SP
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSP 1767
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
+SPS+ YSP+ P YSP+S +Y+P
Sbjct: 1768 SYSPSSPSYSPTSPKYSPTS-PKYSP 1792
Score = 95.5 bits (236), Expect = 2e-18
Identities = 48/79 (60%), Positives = 59/79 (74%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP ++P SP SP+SP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1575 PNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSP 1634
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1635 SYSPTSPSYSPTSPS-YSP 1652
Score = 95.5 bits (236), Expect = 2e-18
Identities = 53/86 (61%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYS-------PTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSPSYS P+SP+YSP+SPTYSP+SP S SP YSP+SP
Sbjct: 1785 PTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSP 1844
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + Y+P
Sbjct: 1845 AYSPTSPAYSPTSPVYSPTSPA-YSP 1869
Score = 91.7 bits (226), Expect = 2e-17
Identities = 44/74 (59%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 297
YSP SP ++P SP+ SP+SP YSP+SP YSP+SP S SP YSP+SP +SP S YSP+
Sbjct: 1573 YSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPT 1632
Query: 296 QPGYSPSSTSQYTP 255
P YSP+S S Y+P
Sbjct: 1633 SPSYSPTSPS-YSP 1645
Score = 90.1 bits (222), Expect = 7e-17
Identities = 45/88 (51%), Positives = 58/88 (65%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVS--------PDYSPSS 333
P+SP YSP+SP YSPT+P YSPTSP YSP+SPTYSPS+P + V PDYSP +
Sbjct: 1904 PTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPSTPTDKSVGSINYSPLEPDYSPGT 1963
Query: 332 PQFSP--STGYSPSQPGYSPSSTSQYTP 255
P +SP + YSP G+S ++ +P
Sbjct: 1964 PTYSPDGTPTYSPDGRGFSGTAAKNISP 1991
Score = 89.4 bits (220), Expect = 1e-16
Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSPYSP------TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 324
P+ +SP + P+YSP SP+++P SP+ SPSSP YSP+SP S SP YSP+SP +
Sbjct: 1556 PAGGFSPAWSPQDSIPSYSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSY 1615
Query: 323 SP-STGYSPSQPGYSPSSTSQYTP 255
SP S GYSP+ P YSP+S S Y+P
Sbjct: 1616 SPTSPGYSPTSPSYSPTSPS-YSP 1638
[16][TOP]
>UniRef100_UPI00019270BB PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 1 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270BB
Length = 2041
Score = 114 bits (286), Expect = 3e-24
Identities = 58/79 (73%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSPSSPQ+SP S
Sbjct: 1728 PTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSP 1787
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP P YSPSS S Y+P
Sbjct: 1788 AYSPQSPSYSPSSPS-YSP 1805
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1651 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1710
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1711 SYSPTSPSYSPTSPS-YSP 1728
Score = 111 bits (277), Expect = 3e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1637 PTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1696
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1697 SYSPTSPSYSPTSPS-YSP 1714
Score = 111 bits (277), Expect = 3e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1693 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSP 1752
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1753 SYSPTSPKYSPTSPS-YSP 1770
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP++
Sbjct: 1672 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1731
Query: 308 -YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1732 IYSPTSPSYSPTSPS-YSP 1749
Score = 110 bits (275), Expect = 5e-23
Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1714 PTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSP 1773
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSPS P YSP+S + Y+PQ+
Sbjct: 1774 SYSPSSPQYSPTSPA-YSPQS 1793
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1630 PTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1689
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1690 SYSPTSPSYSPTSPS-YSP 1707
Score = 110 bits (274), Expect = 6e-23
Identities = 55/81 (67%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1721 PTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSP 1780
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSP S S Y+P +
Sbjct: 1781 QYSPTSPAYSPQSPS-YSPSS 1800
Score = 110 bits (274), Expect = 6e-23
Identities = 55/79 (69%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP YSPTSPSYSPSSP+YSPSSP S SP YSP+SP +SP S
Sbjct: 1805 PTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSP 1864
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1865 AYSPTSPAYSPTSPA-YSP 1882
Score = 109 bits (273), Expect = 8e-23
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1623 PTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1682
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1683 SYSPTSPSYSPTSPS-YSP 1700
Score = 109 bits (272), Expect = 1e-22
Identities = 56/79 (70%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSPSSP YSP+SP S SP YSPSSP +SP S
Sbjct: 1749 PTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSP 1808
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1809 KYSPTSPKYSPTS-PKYSP 1826
Score = 108 bits (270), Expect = 2e-22
Identities = 55/79 (69%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP YSPTSP YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1616 PSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSP 1675
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1676 SYSPTSPSYSPTSPS-YSP 1693
Score = 108 bits (270), Expect = 2e-22
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP YSPTSP+YSP SPSYSPSSP+YSP+SP S SP YSP+SP++SP S
Sbjct: 1770 PTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSP 1829
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS P YSPSS + Y+P
Sbjct: 1830 SYSPSSPSYSPSSPN-YSP 1847
Score = 107 bits (268), Expect = 3e-22
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP YSPTSP YSPTSP YSP+SP+YSPSSP S SP+YSP+SP +SP S
Sbjct: 1798 PSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSP 1857
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1858 TYSPTSPAYSPTSPA-YSP 1875
Score = 107 bits (266), Expect = 5e-22
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SPNYSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1833 PSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSP 1892
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1893 AYSPTSPKYSPTS-PKYSP 1910
Score = 105 bits (263), Expect = 1e-21
Identities = 57/106 (53%), Positives = 67/106 (63%), Gaps = 29/106 (27%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 318
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP++SP
Sbjct: 1847 PTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSPKYSPTSP 1906
Query: 317 -------------------STGYSPSQPGYSPSS------TSQYTP 255
STGYSP+ P YSPSS T QY+P
Sbjct: 1907 KYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSP 1952
Score = 105 bits (262), Expect = 2e-21
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSP SP+YSP+SPSYSPTSP YSP+SP YSP+SP S SP YSPSSP +SPS+
Sbjct: 1784 PTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSP 1843
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1844 NYSPTSPTYSPTSPT-YSP 1861
Score = 104 bits (259), Expect = 3e-21
Identities = 51/79 (64%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP+YSP+SP+YSPTSP+YSP+SPTYSP+SP S SP YSP+SP +SP S
Sbjct: 1826 PTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSP 1885
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1886 VYSPTSPAYSPTS-PKYSP 1903
Score = 102 bits (253), Expect = 2e-20
Identities = 51/79 (64%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP SP+SP YSPTSP YSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 PQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSP 1668
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1669 SYSPTSPSYSPTSPS-YSP 1686
Score = 101 bits (252), Expect = 2e-20
Identities = 55/85 (64%), Positives = 64/85 (75%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1700 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSP 1759
Query: 311 GYSPSQP---GYSPS---STSQYTP 255
YSP+ P SPS S+ QY+P
Sbjct: 1760 KYSPTSPSYSPTSPSYSPSSPQYSP 1784
Score = 101 bits (251), Expect = 3e-20
Identities = 54/88 (61%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSG---VSPDYSPSSP 330
P+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP ++G SP+YSPSSP
Sbjct: 1882 PTSPVYSPTSPAYSPTSPKYSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSP 1941
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTPQT 249
++SP+T YSP+ P YSP+S + Y+P T
Sbjct: 1942 KYSPTTPQYSPTSPKYSPASPT-YSPST 1968
Score = 100 bits (250), Expect = 4e-20
Identities = 56/88 (63%), Positives = 66/88 (75%), Gaps = 9/88 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYS-------PTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYS PTSP+YSP SP+YSPSSP S SP YSP+SP
Sbjct: 1756 PTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSP 1815
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTPQT 249
++SP S YSP+ P YSPSS S Y+P +
Sbjct: 1816 KYSPTSPKYSPTSPSYSPSSPS-YSPSS 1842
Score = 100 bits (250), Expect = 4e-20
Identities = 56/99 (56%), Positives = 63/99 (63%), Gaps = 13/99 (13%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP YSPTS YSPTSP YSPSSP YSP++P S SP YSP+SP +SPST
Sbjct: 1910 PTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPSTP 1969
Query: 311 --------GYSPSQPGYSPSSTSQYTPQ---TNDQDERG 228
YSP +P YSP T Y+P T D RG
Sbjct: 1970 TDKSVGSINYSPLEPDYSP-GTPTYSPDGTPTYSPDGRG 2007
Score = 99.4 bits (246), Expect = 1e-19
Identities = 53/85 (62%), Positives = 65/85 (76%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1679 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSP 1738
Query: 311 GYSPSQP---GYSPS---STSQYTP 255
YSP+ P SPS ++ +Y+P
Sbjct: 1739 SYSPTSPSYSPTSPSYSPTSPKYSP 1763
Score = 99.0 bits (245), Expect = 1e-19
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1658 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1717
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1718 SYSPTSPSYSPTSPIYSPTSPS-YSP 1742
Score = 98.2 bits (243), Expect = 2e-19
Identities = 54/86 (62%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSP YS P+SP+YSPSSP S SP YSP SP
Sbjct: 1735 PTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSP 1794
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
+SPS+ YSP+ P YSP+S +Y+P
Sbjct: 1795 SYSPSSPSYSPTSPKYSPTS-PKYSP 1819
Score = 95.5 bits (236), Expect = 2e-18
Identities = 48/79 (60%), Positives = 59/79 (74%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP ++P SP SP+SP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSP 1661
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1662 SYSPTSPSYSPTSPS-YSP 1679
Score = 95.5 bits (236), Expect = 2e-18
Identities = 53/86 (61%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYS-------PTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSPSYS P+SP+YSP+SPTYSP+SP S SP YSP+SP
Sbjct: 1812 PTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSP 1871
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + Y+P
Sbjct: 1872 AYSPTSPAYSPTSPVYSPTSPA-YSP 1896
Score = 94.4 bits (233), Expect = 4e-18
Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 7/83 (8%)
Frame = -3
Query: 482 SSPYSPT------SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 321
SSPY P+ SP+YSP SP+++P SP+ SPSSP YSP+SP S SP YSP+SP +S
Sbjct: 1584 SSPYIPSPSRNVMSPSYSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYS 1643
Query: 320 P-STGYSPSQPGYSPSSTSQYTP 255
P S GYSP+ P YSP+S S Y+P
Sbjct: 1644 PTSPGYSPTSPSYSPTSPS-YSP 1665
Score = 92.4 bits (228), Expect = 1e-17
Identities = 45/77 (58%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSP SP ++P SP+ SP+SP YSP+SP YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1597 SPSYSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSY 1656
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1657 SPTSPSYSPTSPS-YSP 1672
Score = 90.1 bits (222), Expect = 7e-17
Identities = 45/88 (51%), Positives = 58/88 (65%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVS--------PDYSPSS 333
P+SP YSP+SP YSPT+P YSPTSP YSP+SPTYSPS+P + V PDYSP +
Sbjct: 1931 PTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPSTPTDKSVGSINYSPLEPDYSPGT 1990
Query: 332 PQFSP--STGYSPSQPGYSPSSTSQYTP 255
P +SP + YSP G+S ++ +P
Sbjct: 1991 PTYSPDGTPTYSPDGRGFSGTAAKNISP 2018
Score = 54.7 bits (130), Expect = 3e-06
Identities = 35/72 (48%), Positives = 42/72 (58%)
Frame = -3
Query: 470 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQP 291
SP S Y P SPS + SPSYSP+SP ++P SP SPSSP GYSP+ P
Sbjct: 1581 SPDSSPYIP-SPSRNVMSPSYSPNSPAFNPQSPA-------MSPSSP------GYSPTSP 1626
Query: 290 GYSPSSTSQYTP 255
YSP+S Y+P
Sbjct: 1627 LYSPTSPG-YSP 1637
[17][TOP]
>UniRef100_UPI000051AA8E PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) n=1 Tax=Apis mellifera
RepID=UPI000051AA8E
Length = 452
Score = 114 bits (286), Expect = 3e-24
Identities = 58/79 (73%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSPSSP Y+P+SP S SP YSPSSPQ+SP S
Sbjct: 253 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPSSPQYSPASP 312
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS P YSP+S S Y+P
Sbjct: 313 SYSPSSPKYSPTSPS-YSP 330
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 155 PTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 214
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 215 SYSPTSPSYSPTSPS-YSP 232
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 176 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 235
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 236 SYSPTSPSYSPTSPS-YSP 253
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 197 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 256
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 257 SYSPTSPSYSPTSPS-YSP 274
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 218 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 277
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS P Y+P+S S Y+P
Sbjct: 278 SYSPSSPNYTPASPS-YSP 295
Score = 111 bits (278), Expect = 2e-23
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 225 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP 284
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
Y+P+ P YSP+S S Y+P +
Sbjct: 285 NYTPASPSYSPTSPS-YSPSS 304
Score = 111 bits (277), Expect = 3e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 148 PSSPNYSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 207
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 208 SYSPTSPSYSPTSPS-YSP 225
Score = 105 bits (262), Expect = 2e-21
Identities = 51/79 (64%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP +P+SPNYSPTSP+YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 141 PTSPSITPSSPNYSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 200
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 201 SYSPTSPSYSPTSPS-YSP 218
Score = 105 bits (261), Expect = 2e-21
Identities = 55/88 (62%), Positives = 65/88 (73%), Gaps = 9/88 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF--SPS 315
PSSP YSPTSP+YSPTSPS++ TSP Y+P+SPTYSP+SP S SP YSPSSPQ S S
Sbjct: 316 PSSPKYSPTSPSYSPTSPSFAGTSPQYTPASPTYSPTSPTYSPTSPSYSPSSPQHTASGS 375
Query: 314 TGYSPSQPGYSPSS------TSQYTPQT 249
T YSPS P YSP+S + QY+P +
Sbjct: 376 TRYSPSSPNYSPTSPTYSPTSPQYSPSS 403
Score = 102 bits (255), Expect = 1e-20
Identities = 55/85 (64%), Positives = 64/85 (75%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 204 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 263
Query: 311 GYSPSQP---GYSPS---STSQYTP 255
YSP+ P SPS S+ YTP
Sbjct: 264 SYSPTSPSYSPTSPSYSPSSPNYTP 288
Score = 102 bits (253), Expect = 2e-20
Identities = 55/102 (53%), Positives = 65/102 (63%), Gaps = 16/102 (15%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 318
P+SP YSP+SPNY+P SPSYSPTSPSYSPSSP YSP+SP S SP YSP+SP +SP
Sbjct: 274 PTSPSYSPSSPNYTPASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSP 333
Query: 317 ------------STGYSPSQPGYSPSSTSQYTPQTNDQDERG 228
S YSP+ P YSP+S S Y+P + G
Sbjct: 334 SFAGTSPQYTPASPTYSPTSPTYSPTSPS-YSPSSPQHTASG 374
Score = 102 bits (253), Expect = 2e-20
Identities = 48/76 (63%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GY 306
S+ YSP+SPNYSPTSP+YSPTSP YSPSS YSP+SP + SP YSP+SP +SP GY
Sbjct: 375 STRYSPSSPNYSPTSPTYSPTSPQYSPSSTKYSPTSPTYTPTSPSYSPTSPTYSPPVPGY 434
Query: 305 SPSQPGYSPSSTSQYT 258
SP+ P YSP+S + T
Sbjct: 435 SPTSPTYSPASPAYET 450
Score = 100 bits (250), Expect = 4e-20
Identities = 49/77 (63%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSPTSP Y PTSPS +P+SP+YSP+SPTYSP+SP S SP YSP+SP +SP S Y
Sbjct: 129 SPSYSPTSPAYLPTSPSITPSSPNYSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSY 188
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 189 SPTSPSYSPTSPS-YSP 204
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 162 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 221
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 222 SYSPTSPSYSPTSPSYSPTSPS-YSP 246
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 183 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 242
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 243 SYSPTSPSYSPTSPSYSPTSPS-YSP 267
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 66/86 (76%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP +YSPSSP + SP YSP+SP
Sbjct: 239 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSP 298
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
+SPS+ YSP+ P YSPSS +Y+P
Sbjct: 299 SYSPSSPQYSPASPSYSPSS-PKYSP 323
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/78 (61%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
P SP SP+YSPTSP+Y PTSPS +PSSP YSP+SP S SP+YSP+SP +SP S
Sbjct: 121 PMSPAGGASPSYSPTSPAYLPTSPSITPSSPNYSPTSPTYSPTSPNYSPTSPSYSPTSPS 180
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 181 YSPTSPSYSPTSPS-YSP 197
Score = 97.1 bits (240), Expect = 6e-19
Identities = 52/87 (59%), Positives = 62/87 (71%), Gaps = 10/87 (11%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPS--------YSPSSPTYSPSSPYNSGVSPDYSPSS 333
P+SP YSPTSP YSPTSPSYSP+SP YSPSSP YSP+SP S SP YSPSS
Sbjct: 344 PASPTYSPTSPTYSPTSPSYSPSSPQHTASGSTRYSPSSPNYSPTSPTYSPTSPQYSPSS 403
Query: 332 PQFSP-STGYSPSQPGYSPSSTSQYTP 255
++SP S Y+P+ P YSP+S + Y+P
Sbjct: 404 TKYSPTSPTYTPTSPSYSPTSPT-YSP 429
[18][TOP]
>UniRef100_UPI0000F2BF13 PREDICTED: similar to RNA polymerase II isoform 2 n=1 Tax=Monodelphis
domestica RepID=UPI0000F2BF13
Length = 1932
Score = 114 bits (285), Expect = 3e-24
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1698 PTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1757
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSPSS +YTPQ+
Sbjct: 1758 SYSPTSPSYSPSS-PRYTPQS 1777
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1586 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1645
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1646 SYSPTSPSYSPTSPS-YSP 1663
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1607 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1666
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1667 SYSPTSPSYSPTSPS-YSP 1684
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1628 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1687
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1688 SYSPTSPSYSPTSPS-YSP 1705
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1649 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1708
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S S Y+P
Sbjct: 1709 NYSPTSPNYTPTSPS-YSP 1726
Score = 110 bits (275), Expect = 5e-23
Identities = 55/85 (64%), Positives = 67/85 (78%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 1733 PTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1792
Query: 311 GYSPSQPGYSPSSTS------QYTP 255
YSP+ P Y+P+S S +YTP
Sbjct: 1793 SYSPTSPKYTPTSPSYSPSSPEYTP 1817
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1572 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1631
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1632 SYSPTSPSYSPTSPS-YSP 1649
Score = 108 bits (270), Expect = 2e-22
Identities = 52/79 (65%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1670 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP 1729
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S + Y+P
Sbjct: 1730 SYSPTSPNYTPTSPN-YSP 1747
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1564 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1623
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1624 PSYSPTSPSYSPTSPS-YSP 1642
Score = 106 bits (264), Expect = 9e-22
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1712 PTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 1771
Query: 311 -------GYSPSQPGYSPSSTSQYTP 255
Y+PS P YSPSS S Y+P
Sbjct: 1772 RYTPQSPTYTPSSPSYSPSSPS-YSP 1796
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1824 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1883
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1884 KYSPTSPTYSPTSPKGSTYSP 1904
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1782 PSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1841
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1842 TYSPTTPKYSPTSPT-YSP 1859
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1810 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1869
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1870 KYSPTSPTYSPTS-PKYSP 1887
Score = 102 bits (253), Expect = 2e-20
Identities = 49/79 (62%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1775 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1834
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP +T +Y+P
Sbjct: 1835 KYSPTSPTYSP-TTPKYSP 1852
Score = 101 bits (252), Expect = 2e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1838 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1897
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 1898 KGSTYSPTSPGYSPTS 1913
Score = 100 bits (250), Expect = 4e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1635 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1694
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + YTP
Sbjct: 1695 SYSPTSPSYSPTSPNYSPTSPN-YTP 1719
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1593 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1652
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1653 SYSPTSPSYSPTSPSYSPTSPS-YSP 1677
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1614 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1673
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1674 SYSPTSPSYSPTSPSYSPTSPS-YSP 1698
Score = 100 bits (249), Expect = 5e-20
Identities = 53/85 (62%), Positives = 63/85 (74%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP+
Sbjct: 1656 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1715
Query: 314 --TGYSPSQPGYSPS---STSQYTP 255
T SPS SPS ++ YTP
Sbjct: 1716 NYTPTSPSYSPTSPSYSPTSPNYTP 1740
Score = 100 bits (249), Expect = 5e-20
Identities = 48/79 (60%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1761 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSP 1820
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1821 KYSPTSPKYSPTS-PKYSP 1838
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1803 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP 1862
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S + Y+P
Sbjct: 1863 VYTPTSPKYSPTSPT-YSP 1880
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1539 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1598
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1599 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1635
Score = 94.7 bits (234), Expect = 3e-18
Identities = 51/86 (59%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P SP
Sbjct: 1719 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSP 1778
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
++PS+ YSPS P YSP+S +YTP
Sbjct: 1779 TYTPSSPSYSPSSPSYSPTS-PKYTP 1803
Score = 92.4 bits (228), Expect = 1e-17
Identities = 51/83 (61%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFS 321
PSSP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP SP SP YSP+SP +S
Sbjct: 1789 PSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYS 1844
Query: 320 PST-GYSPSQPGYSPSSTSQYTP 255
P+T YSP+ P YSP+S YTP
Sbjct: 1845 PTTPKYSPTSPTYSPTS-PVYTP 1866
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1852 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP---- 1907
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + +P +D++
Sbjct: 1908 --GYSPTSPTYSLTSPA-ISPDDSDEE 1931
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPS 315
+S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P
Sbjct: 1513 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPR 1565
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 1566 SPGGYTPQSPSYSPTSPS-YSP 1586
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1499 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1555
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P Y P S YTPQ+
Sbjct: 1556 SPTSPAYEPRSPGGYTPQS 1574
[19][TOP]
>UniRef100_UPI0000F2BF12 PREDICTED: similar to RNA polymerase II isoform 1 n=1 Tax=Monodelphis
domestica RepID=UPI0000F2BF12
Length = 1970
Score = 114 bits (285), Expect = 3e-24
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1736 PTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1795
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSPSS +YTPQ+
Sbjct: 1796 SYSPTSPSYSPSS-PRYTPQS 1815
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1684 SYSPTSPSYSPTSPS-YSP 1701
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1704
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1705 SYSPTSPSYSPTSPS-YSP 1722
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1725
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1726 SYSPTSPSYSPTSPS-YSP 1743
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1746
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S S Y+P
Sbjct: 1747 NYSPTSPNYTPTSPS-YSP 1764
Score = 110 bits (275), Expect = 5e-23
Identities = 55/85 (64%), Positives = 67/85 (78%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 1771 PTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1830
Query: 311 GYSPSQPGYSPSSTS------QYTP 255
YSP+ P Y+P+S S +YTP
Sbjct: 1831 SYSPTSPKYTPTSPSYSPSSPEYTP 1855
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1669
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1670 SYSPTSPSYSPTSPS-YSP 1687
Score = 108 bits (270), Expect = 2e-22
Identities = 52/79 (65%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP 1767
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S + Y+P
Sbjct: 1768 SYSPTSPNYTPTSPN-YSP 1785
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 106 bits (264), Expect = 9e-22
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1750 PTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 1809
Query: 311 -------GYSPSQPGYSPSSTSQYTP 255
Y+PS P YSPSS S Y+P
Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPS-YSP 1834
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1862 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1921
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1922 KYSPTSPTYSPTSPKGSTYSP 1942
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1820 PSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1879
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1880 TYSPTTPKYSPTSPT-YSP 1897
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1848 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1907
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1908 KYSPTSPTYSPTS-PKYSP 1925
Score = 102 bits (253), Expect = 2e-20
Identities = 49/79 (62%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1813 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1872
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP +T +Y+P
Sbjct: 1873 KYSPTSPTYSP-TTPKYSP 1890
Score = 101 bits (252), Expect = 2e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1876 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1935
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 1936 KGSTYSPTSPGYSPTS 1951
Score = 100 bits (250), Expect = 4e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1732
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + YTP
Sbjct: 1733 SYSPTSPSYSPTSPNYSPTSPN-YTP 1757
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1691 SYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1712 SYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 100 bits (249), Expect = 5e-20
Identities = 53/85 (62%), Positives = 63/85 (74%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP+
Sbjct: 1694 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1753
Query: 314 --TGYSPSQPGYSPS---STSQYTP 255
T SPS SPS ++ YTP
Sbjct: 1754 NYTPTSPSYSPTSPSYSPTSPNYTP 1778
Score = 100 bits (249), Expect = 5e-20
Identities = 48/79 (60%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1799 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSP 1858
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1859 KYSPTSPKYSPTS-PKYSP 1876
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1841 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP 1900
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S + Y+P
Sbjct: 1901 VYTPTSPKYSPTSPT-YSP 1918
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 94.7 bits (234), Expect = 3e-18
Identities = 51/86 (59%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P SP
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSP 1816
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
++PS+ YSPS P YSP+S +YTP
Sbjct: 1817 TYTPSSPSYSPSSPSYSPTS-PKYTP 1841
Score = 92.4 bits (228), Expect = 1e-17
Identities = 51/83 (61%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFS 321
PSSP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP SP SP YSP+SP +S
Sbjct: 1827 PSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYS 1882
Query: 320 PST-GYSPSQPGYSPSSTSQYTP 255
P+T YSP+ P YSP+S YTP
Sbjct: 1883 PTTPKYSPTSPTYSPTS-PVYTP 1904
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1890 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP---- 1945
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + +P +D++
Sbjct: 1946 --GYSPTSPTYSLTSPA-ISPDDSDEE 1969
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPS 315
+S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P
Sbjct: 1551 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPR 1603
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 1604 SPGGYTPQSPSYSPTSPS-YSP 1624
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1537 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1593
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P Y P S YTPQ+
Sbjct: 1594 SPTSPAYEPRSPGGYTPQS 1612
[20][TOP]
>UniRef100_UPI0000EBDCD2 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
isoform 4 n=1 Tax=Bos taurus RepID=UPI0000EBDCD2
Length = 1970
Score = 114 bits (285), Expect = 3e-24
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1736 PTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1795
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSPSS +YTPQ+
Sbjct: 1796 SYSPTSPSYSPSS-PRYTPQS 1815
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1684 SYSPTSPSYSPTSPS-YSP 1701
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1704
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1705 SYSPTSPSYSPTSPS-YSP 1722
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1725
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1726 SYSPTSPSYSPTSPS-YSP 1743
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1746
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S S Y+P
Sbjct: 1747 NYSPTSPNYTPTSPS-YSP 1764
Score = 110 bits (275), Expect = 5e-23
Identities = 55/85 (64%), Positives = 67/85 (78%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 1771 PTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1830
Query: 311 GYSPSQPGYSPSSTS------QYTP 255
YSP+ P Y+P+S S +YTP
Sbjct: 1831 SYSPTSPKYTPTSPSYSPSSPEYTP 1855
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1669
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1670 SYSPTSPSYSPTSPS-YSP 1687
Score = 108 bits (270), Expect = 2e-22
Identities = 52/79 (65%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP 1767
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S + Y+P
Sbjct: 1768 SYSPTSPNYTPTSPN-YSP 1785
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 106 bits (264), Expect = 9e-22
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1750 PTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 1809
Query: 311 -------GYSPSQPGYSPSSTSQYTP 255
Y+PS P YSPSS S Y+P
Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPS-YSP 1834
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1862 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1921
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1922 KYSPTSPTYSPTSPKGSTYSP 1942
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1820 PSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1879
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1880 TYSPTTPKYSPTSPT-YSP 1897
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1848 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1907
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1908 KYSPTSPTYSPTS-PKYSP 1925
Score = 102 bits (253), Expect = 2e-20
Identities = 49/79 (62%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1813 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1872
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP +T +Y+P
Sbjct: 1873 KYSPTSPTYSP-TTPKYSP 1890
Score = 101 bits (252), Expect = 2e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1876 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1935
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 1936 KGSTYSPTSPGYSPTS 1951
Score = 100 bits (250), Expect = 4e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1732
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + YTP
Sbjct: 1733 SYSPTSPSYSPTSPNYSPTSPN-YTP 1757
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1691 SYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1712 SYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 100 bits (249), Expect = 5e-20
Identities = 53/85 (62%), Positives = 63/85 (74%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP+
Sbjct: 1694 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1753
Query: 314 --TGYSPSQPGYSPS---STSQYTP 255
T SPS SPS ++ YTP
Sbjct: 1754 NYTPTSPSYSPTSPSYSPTSPNYTP 1778
Score = 100 bits (249), Expect = 5e-20
Identities = 48/79 (60%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1799 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSP 1858
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1859 KYSPTSPKYSPTS-PKYSP 1876
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1841 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP 1900
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S + Y+P
Sbjct: 1901 VYTPTSPKYSPTSPT-YSP 1918
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 94.7 bits (234), Expect = 3e-18
Identities = 51/86 (59%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P SP
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSP 1816
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
++PS+ YSPS P YSP+S +YTP
Sbjct: 1817 TYTPSSPSYSPSSPSYSPTS-PKYTP 1841
Score = 92.4 bits (228), Expect = 1e-17
Identities = 51/83 (61%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFS 321
PSSP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP SP SP YSP+SP +S
Sbjct: 1827 PSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYS 1882
Query: 320 PST-GYSPSQPGYSPSSTSQYTP 255
P+T YSP+ P YSP+S YTP
Sbjct: 1883 PTTPKYSPTSPTYSPTS-PVYTP 1904
Score = 88.2 bits (217), Expect = 3e-16
Identities = 47/87 (54%), Positives = 60/87 (68%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1890 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP---- 1945
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + ++D++
Sbjct: 1946 --GYSPTSPTYSLTSPAISPDDSDDEN 1970
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPS 315
+S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P
Sbjct: 1551 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPR 1603
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 1604 SPGGYTPQSPSYSPTSPS-YSP 1624
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1537 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1593
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P Y P S YTPQ+
Sbjct: 1594 SPTSPAYEPRSPGGYTPQS 1612
[21][TOP]
>UniRef100_UPI0001B7A25C UPI0001B7A25C related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25C
Length = 1968
Score = 114 bits (285), Expect = 3e-24
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1738 PTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1797
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSPSS +YTPQ+
Sbjct: 1798 SYSPTSPSYSPSS-PRYTPQS 1817
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1626 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1685
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1686 SYSPTSPSYSPTSPS-YSP 1703
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1647 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1706
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1707 SYSPTSPSYSPTSPS-YSP 1724
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1668 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1727
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1728 SYSPTSPSYSPTSPS-YSP 1745
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1689 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1748
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S S Y+P
Sbjct: 1749 NYSPTSPNYTPTSPS-YSP 1766
Score = 110 bits (275), Expect = 5e-23
Identities = 55/85 (64%), Positives = 67/85 (78%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 1773 PTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1832
Query: 311 GYSPSQPGYSPSSTS------QYTP 255
YSP+ P Y+P+S S +YTP
Sbjct: 1833 SYSPTSPKYTPTSPSYSPSSPEYTP 1857
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1612 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1671
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1672 SYSPTSPSYSPTSPS-YSP 1689
Score = 108 bits (270), Expect = 2e-22
Identities = 52/79 (65%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1710 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP 1769
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S + Y+P
Sbjct: 1770 SYSPTSPNYTPTSPN-YSP 1787
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1604 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1663
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1664 PSYSPTSPSYSPTSPS-YSP 1682
Score = 106 bits (264), Expect = 9e-22
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1752 PTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 1811
Query: 311 -------GYSPSQPGYSPSSTSQYTP 255
Y+PS P YSPSS S Y+P
Sbjct: 1812 RYTPQSPTYTPSSPSYSPSSPS-YSP 1836
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1864 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1923
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1924 KYSPTSPTYSPTSPKGSTYSP 1944
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1822 PSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1881
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1882 TYSPTTPKYSPTSPT-YSP 1899
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1850 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1909
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1910 KYSPTSPTYSPTS-PKYSP 1927
Score = 102 bits (253), Expect = 2e-20
Identities = 49/79 (62%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1815 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1874
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP +T +Y+P
Sbjct: 1875 KYSPTSPTYSP-TTPKYSP 1892
Score = 101 bits (252), Expect = 2e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1878 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1937
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 1938 KGSTYSPTSPGYSPTS 1953
Score = 100 bits (250), Expect = 4e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1675 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1734
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + YTP
Sbjct: 1735 SYSPTSPSYSPTSPNYSPTSPN-YTP 1759
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1633 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1692
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1693 SYSPTSPSYSPTSPSYSPTSPS-YSP 1717
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1654 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1713
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1714 SYSPTSPSYSPTSPSYSPTSPS-YSP 1738
Score = 100 bits (249), Expect = 5e-20
Identities = 53/85 (62%), Positives = 63/85 (74%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP+
Sbjct: 1696 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1755
Query: 314 --TGYSPSQPGYSPS---STSQYTP 255
T SPS SPS ++ YTP
Sbjct: 1756 NYTPTSPSYSPTSPSYSPTSPNYTP 1780
Score = 100 bits (249), Expect = 5e-20
Identities = 48/79 (60%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1801 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSP 1860
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1861 KYSPTSPKYSPTS-PKYSP 1878
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1843 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP 1902
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S + Y+P
Sbjct: 1903 VYTPTSPKYSPTSPT-YSP 1920
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1579 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1638
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1639 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1675
Score = 94.7 bits (234), Expect = 3e-18
Identities = 51/86 (59%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P SP
Sbjct: 1759 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSP 1818
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
++PS+ YSPS P YSP+S +YTP
Sbjct: 1819 TYTPSSPSYSPSSPSYSPTS-PKYTP 1843
Score = 92.4 bits (228), Expect = 1e-17
Identities = 51/83 (61%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFS 321
PSSP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP SP SP YSP+SP +S
Sbjct: 1829 PSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYS 1884
Query: 320 PST-GYSPSQPGYSPSSTSQYTP 255
P+T YSP+ P YSP+S YTP
Sbjct: 1885 PTTPKYSPTSPTYSPTS-PVYTP 1906
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPS 315
+S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P
Sbjct: 1553 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPR 1605
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 1606 SPGGYTPQSPSYSPTSPS-YSP 1626
Score = 53.1 bits (126), Expect = 9e-06
Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = -3
Query: 470 SPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPS 297
+P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S YSP+
Sbjct: 1542 TPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSYSPT 1598
Query: 296 QPGYSPSSTSQYTPQT 249
P Y P S YTPQ+
Sbjct: 1599 SPAYEPRSPGGYTPQS 1614
[22][TOP]
>UniRef100_UPI0001B7A25B UPI0001B7A25B related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25B
Length = 1932
Score = 114 bits (285), Expect = 3e-24
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1698 PTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1757
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSPSS +YTPQ+
Sbjct: 1758 SYSPTSPSYSPSS-PRYTPQS 1777
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1586 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1645
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1646 SYSPTSPSYSPTSPS-YSP 1663
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1607 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1666
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1667 SYSPTSPSYSPTSPS-YSP 1684
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1628 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1687
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1688 SYSPTSPSYSPTSPS-YSP 1705
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1649 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1708
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S S Y+P
Sbjct: 1709 NYSPTSPNYTPTSPS-YSP 1726
Score = 110 bits (275), Expect = 5e-23
Identities = 55/85 (64%), Positives = 67/85 (78%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 1733 PTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1792
Query: 311 GYSPSQPGYSPSSTS------QYTP 255
YSP+ P Y+P+S S +YTP
Sbjct: 1793 SYSPTSPKYTPTSPSYSPSSPEYTP 1817
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1572 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1631
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1632 SYSPTSPSYSPTSPS-YSP 1649
Score = 108 bits (270), Expect = 2e-22
Identities = 52/79 (65%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1670 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP 1729
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S + Y+P
Sbjct: 1730 SYSPTSPNYTPTSPN-YSP 1747
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1564 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1623
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1624 PSYSPTSPSYSPTSPS-YSP 1642
Score = 106 bits (264), Expect = 9e-22
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1712 PTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 1771
Query: 311 -------GYSPSQPGYSPSSTSQYTP 255
Y+PS P YSPSS S Y+P
Sbjct: 1772 RYTPQSPTYTPSSPSYSPSSPS-YSP 1796
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1824 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1883
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1884 KYSPTSPTYSPTSPKGSTYSP 1904
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1782 PSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1841
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1842 TYSPTTPKYSPTSPT-YSP 1859
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1810 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1869
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1870 KYSPTSPTYSPTS-PKYSP 1887
Score = 102 bits (253), Expect = 2e-20
Identities = 49/79 (62%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1775 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1834
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP +T +Y+P
Sbjct: 1835 KYSPTSPTYSP-TTPKYSP 1852
Score = 102 bits (253), Expect = 2e-20
Identities = 50/94 (53%), Positives = 68/94 (72%), Gaps = 11/94 (11%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1838 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1897
Query: 314 --TGYSPSQPGYSPSS------TSQYTPQTNDQD 237
+ YSP+ PGYSP+S + +P+ +D++
Sbjct: 1898 KGSTYSPTSPGYSPTSPTYSLTSPAISPEDSDEE 1931
Score = 100 bits (250), Expect = 4e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1635 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1694
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + YTP
Sbjct: 1695 SYSPTSPSYSPTSPNYSPTSPN-YTP 1719
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1593 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1652
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1653 SYSPTSPSYSPTSPSYSPTSPS-YSP 1677
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1614 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1673
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1674 SYSPTSPSYSPTSPSYSPTSPS-YSP 1698
Score = 100 bits (249), Expect = 5e-20
Identities = 53/85 (62%), Positives = 63/85 (74%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP+
Sbjct: 1656 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1715
Query: 314 --TGYSPSQPGYSPS---STSQYTP 255
T SPS SPS ++ YTP
Sbjct: 1716 NYTPTSPSYSPTSPSYSPTSPNYTP 1740
Score = 100 bits (249), Expect = 5e-20
Identities = 48/79 (60%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1761 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSP 1820
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1821 KYSPTSPKYSPTS-PKYSP 1838
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1803 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP 1862
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S + Y+P
Sbjct: 1863 VYTPTSPKYSPTSPT-YSP 1880
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1539 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1598
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1599 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1635
Score = 94.7 bits (234), Expect = 3e-18
Identities = 51/86 (59%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P SP
Sbjct: 1719 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSP 1778
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
++PS+ YSPS P YSP+S +YTP
Sbjct: 1779 TYTPSSPSYSPSSPSYSPTS-PKYTP 1803
Score = 92.4 bits (228), Expect = 1e-17
Identities = 51/83 (61%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFS 321
PSSP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP SP SP YSP+SP +S
Sbjct: 1789 PSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYS 1844
Query: 320 PST-GYSPSQPGYSPSSTSQYTP 255
P+T YSP+ P YSP+S YTP
Sbjct: 1845 PTTPKYSPTSPTYSPTS-PVYTP 1866
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPS 315
+S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P
Sbjct: 1513 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPR 1565
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 1566 SPGGYTPQSPSYSPTSPS-YSP 1586
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1499 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1555
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P Y P S YTPQ+
Sbjct: 1556 SPTSPAYEPRSPGGYTPQS 1574
[23][TOP]
>UniRef100_UPI0000DA33D8 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) n=1 Tax=Rattus norvegicus RepID=UPI0000DA33D8
Length = 1970
Score = 114 bits (285), Expect = 3e-24
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1736 PTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1795
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSPSS +YTPQ+
Sbjct: 1796 SYSPTSPSYSPSS-PRYTPQS 1815
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1684 SYSPTSPSYSPTSPS-YSP 1701
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1704
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1705 SYSPTSPSYSPTSPS-YSP 1722
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1725
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1726 SYSPTSPSYSPTSPS-YSP 1743
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1746
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S S Y+P
Sbjct: 1747 NYSPTSPNYTPTSPS-YSP 1764
Score = 110 bits (275), Expect = 5e-23
Identities = 55/85 (64%), Positives = 67/85 (78%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 1771 PTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1830
Query: 311 GYSPSQPGYSPSSTS------QYTP 255
YSP+ P Y+P+S S +YTP
Sbjct: 1831 SYSPTSPKYTPTSPSYSPSSPEYTP 1855
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1669
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1670 SYSPTSPSYSPTSPS-YSP 1687
Score = 108 bits (270), Expect = 2e-22
Identities = 52/79 (65%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP 1767
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S + Y+P
Sbjct: 1768 SYSPTSPNYTPTSPN-YSP 1785
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 106 bits (264), Expect = 9e-22
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1750 PTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 1809
Query: 311 -------GYSPSQPGYSPSSTSQYTP 255
Y+PS P YSPSS S Y+P
Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPS-YSP 1834
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1862 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1921
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1922 KYSPTSPTYSPTSPKGSTYSP 1942
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1820 PSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1879
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1880 TYSPTTPKYSPTSPT-YSP 1897
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1848 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1907
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1908 KYSPTSPTYSPTS-PKYSP 1925
Score = 102 bits (253), Expect = 2e-20
Identities = 49/79 (62%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1813 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1872
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP +T +Y+P
Sbjct: 1873 KYSPTSPTYSP-TTPKYSP 1890
Score = 102 bits (253), Expect = 2e-20
Identities = 50/94 (53%), Positives = 68/94 (72%), Gaps = 11/94 (11%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1876 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1935
Query: 314 --TGYSPSQPGYSPSS------TSQYTPQTNDQD 237
+ YSP+ PGYSP+S + +P+ +D++
Sbjct: 1936 KGSTYSPTSPGYSPTSPTYSLTSPAISPEDSDEE 1969
Score = 100 bits (250), Expect = 4e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1732
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + YTP
Sbjct: 1733 SYSPTSPSYSPTSPNYSPTSPN-YTP 1757
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1691 SYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1712 SYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 100 bits (249), Expect = 5e-20
Identities = 53/85 (62%), Positives = 63/85 (74%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP+
Sbjct: 1694 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1753
Query: 314 --TGYSPSQPGYSPS---STSQYTP 255
T SPS SPS ++ YTP
Sbjct: 1754 NYTPTSPSYSPTSPSYSPTSPNYTP 1778
Score = 100 bits (249), Expect = 5e-20
Identities = 48/79 (60%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1799 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSP 1858
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1859 KYSPTSPKYSPTS-PKYSP 1876
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1841 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP 1900
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S + Y+P
Sbjct: 1901 VYTPTSPKYSPTSPT-YSP 1918
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 94.7 bits (234), Expect = 3e-18
Identities = 51/86 (59%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P SP
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSP 1816
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
++PS+ YSPS P YSP+S +YTP
Sbjct: 1817 TYTPSSPSYSPSSPSYSPTS-PKYTP 1841
Score = 92.4 bits (228), Expect = 1e-17
Identities = 51/83 (61%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFS 321
PSSP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP SP SP YSP+SP +S
Sbjct: 1827 PSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYS 1882
Query: 320 PST-GYSPSQPGYSPSSTSQYTP 255
P+T YSP+ P YSP+S YTP
Sbjct: 1883 PTTPKYSPTSPTYSPTS-PVYTP 1904
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPS 315
+S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P
Sbjct: 1551 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPR 1603
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 1604 SPGGYTPQSPSYSPTSPS-YSP 1624
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1537 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1593
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P Y P S YTPQ+
Sbjct: 1594 SPTSPAYEPRSPGGYTPQS 1612
[24][TOP]
>UniRef100_O35559 DNA-directed RNA polymerase n=1 Tax=Cricetulus griseus
RepID=O35559_CRIGR
Length = 1970
Score = 114 bits (285), Expect = 3e-24
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1736 PTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1795
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSPSS +YTPQ+
Sbjct: 1796 SYSPTSPSYSPSS-PRYTPQS 1815
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1684 SYSPTSPSYSPTSPS-YSP 1701
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1704
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1705 SYSPTSPSYSPTSPS-YSP 1722
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1725
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1726 SYSPTSPSYSPTSPS-YSP 1743
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1746
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S S Y+P
Sbjct: 1747 NYSPTSPNYTPTSPS-YSP 1764
Score = 110 bits (275), Expect = 5e-23
Identities = 55/85 (64%), Positives = 67/85 (78%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 1771 PTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1830
Query: 311 GYSPSQPGYSPSSTS------QYTP 255
YSP+ P Y+P+S S +YTP
Sbjct: 1831 SYSPTSPKYTPTSPSYSPSSPEYTP 1855
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1669
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1670 SYSPTSPSYSPTSPS-YSP 1687
Score = 108 bits (270), Expect = 2e-22
Identities = 52/79 (65%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP 1767
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S + Y+P
Sbjct: 1768 SYSPTSPNYTPTSPN-YSP 1785
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 106 bits (264), Expect = 9e-22
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1750 PTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 1809
Query: 311 -------GYSPSQPGYSPSSTSQYTP 255
Y+PS P YSPSS S Y+P
Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPS-YSP 1834
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1862 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1921
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1922 KYSPTSPTYSPTSPKGSTYSP 1942
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1820 PSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1879
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1880 TYSPTTPKYSPTSPT-YSP 1897
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1848 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1907
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1908 KYSPTSPTYSPTS-PKYSP 1925
Score = 102 bits (253), Expect = 2e-20
Identities = 49/79 (62%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1813 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1872
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP +T +Y+P
Sbjct: 1873 KYSPTSPTYSP-TTPKYSP 1890
Score = 101 bits (252), Expect = 2e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1876 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1935
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 1936 KGSTYSPTSPGYSPTS 1951
Score = 100 bits (250), Expect = 4e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1732
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + YTP
Sbjct: 1733 SYSPTSPSYSPTSPNYSPTSPN-YTP 1757
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1691 SYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1712 SYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 100 bits (249), Expect = 5e-20
Identities = 53/85 (62%), Positives = 63/85 (74%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP+
Sbjct: 1694 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1753
Query: 314 --TGYSPSQPGYSPS---STSQYTP 255
T SPS SPS ++ YTP
Sbjct: 1754 NYTPTSPSYSPTSPSYSPTSPNYTP 1778
Score = 100 bits (249), Expect = 5e-20
Identities = 48/79 (60%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1799 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSP 1858
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1859 KYSPTSPKYSPTS-PKYSP 1876
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1841 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP 1900
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S + Y+P
Sbjct: 1901 VYTPTSPKYSPTSPT-YSP 1918
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 94.7 bits (234), Expect = 3e-18
Identities = 51/86 (59%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P SP
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSP 1816
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
++PS+ YSPS P YSP+S +YTP
Sbjct: 1817 TYTPSSPSYSPSSPSYSPTS-PKYTP 1841
Score = 92.4 bits (228), Expect = 1e-17
Identities = 51/83 (61%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFS 321
PSSP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP SP SP YSP+SP +S
Sbjct: 1827 PSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYS 1882
Query: 320 PST-GYSPSQPGYSPSSTSQYTP 255
P+T YSP+ P YSP+S YTP
Sbjct: 1883 PTTPKYSPTSPTYSPTS-PVYTP 1904
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1890 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP---- 1945
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + +P +D++
Sbjct: 1946 --GYSPTSPTYSLTSPA-ISPDDSDEE 1969
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPS 315
+S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P
Sbjct: 1551 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPR 1603
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 1604 SPGGYTPQSPSYSPTSPS-YSP 1624
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1537 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1593
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P Y P S YTPQ+
Sbjct: 1594 SPTSPAYEPRSPGGYTPQS 1612
[25][TOP]
>UniRef100_O08847 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=O08847_MOUSE
Length = 1966
Score = 114 bits (285), Expect = 3e-24
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1736 PTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1795
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSPSS +YTPQ+
Sbjct: 1796 SYSPTSPSYSPSS-PRYTPQS 1815
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1684 SYSPTSPSYSPTSPS-YSP 1701
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1704
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1705 SYSPTSPSYSPTSPS-YSP 1722
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1725
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1726 SYSPTSPSYSPTSPS-YSP 1743
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1746
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S S Y+P
Sbjct: 1747 NYSPTSPNYTPTSPS-YSP 1764
Score = 110 bits (275), Expect = 5e-23
Identities = 55/85 (64%), Positives = 67/85 (78%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 1771 PTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1830
Query: 311 GYSPSQPGYSPSSTS------QYTP 255
YSP+ P Y+P+S S +YTP
Sbjct: 1831 SYSPTSPKYTPTSPSYSPSSPEYTP 1855
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1669
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1670 SYSPTSPSYSPTSPS-YSP 1687
Score = 108 bits (270), Expect = 2e-22
Identities = 52/79 (65%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP 1767
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S + Y+P
Sbjct: 1768 SYSPTSPNYTPTSPN-YSP 1785
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 106 bits (264), Expect = 9e-22
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1750 PTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 1809
Query: 311 -------GYSPSQPGYSPSSTSQYTP 255
Y+PS P YSPSS S Y+P
Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPS-YSP 1834
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1862 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1921
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1922 KYSPTSPTYSPTSPKGSTYSP 1942
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1820 PSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSP 1879
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1880 TYSPTTPKYSPTSPT-YSP 1897
Score = 102 bits (255), Expect = 1e-20
Identities = 51/90 (56%), Positives = 67/90 (74%), Gaps = 7/90 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1876 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1935
Query: 314 --TGYSPSQPGYSPSST--SQYTPQTNDQD 237
+ YSP+ PGYSP+S S +P +D++
Sbjct: 1936 KGSTYSPTSPGYSPTSPTYSLTSPAISDEE 1965
Score = 102 bits (253), Expect = 2e-20
Identities = 49/79 (62%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1813 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSP 1872
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP +T +Y+P
Sbjct: 1873 KYSPTSPTYSP-TTPKYSP 1890
Score = 102 bits (253), Expect = 2e-20
Identities = 50/79 (63%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP YSPTSP+YSP++P YSP+SP S SP Y+P+SP++SP S
Sbjct: 1855 PASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSP 1914
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1915 TYSPTSPKYSPTSPT-YSP 1932
Score = 101 bits (252), Expect = 2e-20
Identities = 50/79 (63%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+P SP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1848 PSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1907
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1908 KYSPTSPTYSPTS-PKYSP 1925
Score = 100 bits (250), Expect = 4e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1732
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + YTP
Sbjct: 1733 SYSPTSPSYSPTSPNYSPTSPN-YTP 1757
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1691 SYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1712 SYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 100 bits (249), Expect = 5e-20
Identities = 53/85 (62%), Positives = 63/85 (74%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP+
Sbjct: 1694 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1753
Query: 314 --TGYSPSQPGYSPS---STSQYTP 255
T SPS SPS ++ YTP
Sbjct: 1754 NYTPTSPSYSPTSPSYSPTSPNYTP 1778
Score = 100 bits (249), Expect = 5e-20
Identities = 48/79 (60%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1799 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASP 1858
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1859 KYSPTSPKYSPTS-PKYSP 1876
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 96.7 bits (239), Expect = 7e-19
Identities = 47/79 (59%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+P SP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1841 PTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP 1900
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S + Y+P
Sbjct: 1901 VYTPTSPKYSPTSPT-YSP 1918
Score = 94.7 bits (234), Expect = 3e-18
Identities = 51/86 (59%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P SP
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSP 1816
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
++PS+ YSPS P YSP+S +YTP
Sbjct: 1817 TYTPSSPSYSPSSPSYSPTS-PKYTP 1841
Score = 92.4 bits (228), Expect = 1e-17
Identities = 51/83 (61%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFS 321
PSSP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP SP SP YSP+SP +S
Sbjct: 1827 PSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSP----TSPKYSPTSPTYS 1882
Query: 320 PST-GYSPSQPGYSPSSTSQYTP 255
P+T YSP+ P YSP+S YTP
Sbjct: 1883 PTTPKYSPTSPTYSPTS-PVYTP 1904
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPS 315
+S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P
Sbjct: 1551 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPR 1603
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 1604 SPGGYTPQSPSYSPTSPS-YSP 1624
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1537 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1593
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P Y P S YTPQ+
Sbjct: 1594 SPTSPAYEPRSPGGYTPQS 1612
[26][TOP]
>UniRef100_Q30BD9 DNA-directed RNA polymerase n=1 Tax=Glaucocystis nostochinearum
RepID=Q30BD9_9EUKA
Length = 1852
Score = 114 bits (285), Expect = 3e-24
Identities = 60/85 (70%), Positives = 66/85 (77%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+ SPTSPSYSPTSPSYSP+SP+YSPSSP S SP YSPSSP +SPS+
Sbjct: 1702 PTSPSYSPTSPSCSPTSPSYSPTSPSYSPTSPSYSPSSPSCSPASPTYSPSSPSYSPSSP 1761
Query: 311 GYSPSQPGYSPSSTS------QYTP 255
YSPS P YSPSS S QYTP
Sbjct: 1762 SYSPSSPSYSPSSPSYSPSSPQYTP 1786
Score = 111 bits (277), Expect = 3e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1604 PTSPSYSPTSPAYSPTSPSYSPTSPGYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSP 1663
Query: 311 GYSPSQPGYSPSSTSQYTP 255
GYSP+ P YSP+S S Y+P
Sbjct: 1664 GYSPTSPSYSPTSPS-YSP 1681
Score = 110 bits (274), Expect = 6e-23
Identities = 55/79 (69%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1632 PTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSP 1691
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1692 SYSPTSPSYSPTSPS-YSP 1709
Score = 109 bits (272), Expect = 1e-22
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1625 PTSPGYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSP 1684
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1685 SYSPTSPSYSPTSPS-YSP 1702
Score = 109 bits (272), Expect = 1e-22
Identities = 57/81 (70%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPS SP+SP+YSP+SP S SP YSPSSP SP S
Sbjct: 1688 PTSPSYSPTSPSYSPTSPSYSPTSPSCSPTSPSYSPTSPSYSPTSPSYSPSSPSCSPASP 1747
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSPS P YSPSS S Y+P +
Sbjct: 1748 TYSPSSPSYSPSSPS-YSPSS 1767
Score = 108 bits (271), Expect = 1e-22
Identities = 55/88 (62%), Positives = 65/88 (73%), Gaps = 9/88 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 318
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP
Sbjct: 1653 PTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1712
Query: 317 -----STGYSPSQPGYSPSSTSQYTPQT 249
S YSP+ P YSP+S S Y+P +
Sbjct: 1713 SCSPTSPSYSPTSPSYSPTSPS-YSPSS 1739
Score = 108 bits (270), Expect = 2e-22
Identities = 55/78 (70%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
SSP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1584 SSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPGYSPTSPSYSPTSPR 1643
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1644 YSPTSPSYSPTSPS-YSP 1660
Score = 105 bits (262), Expect = 2e-21
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YS +SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1576 PTSPGYSASSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPGYSPTSP 1635
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1636 SYSPTSPRYSPTSPS-YSP 1653
Score = 104 bits (260), Expect = 3e-21
Identities = 51/77 (66%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSPTSP YS +SPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S GY
Sbjct: 1571 SPRYSPTSPGYSASSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPGY 1630
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S +Y+P
Sbjct: 1631 SPTSPSYSPTS-PRYSP 1646
Score = 102 bits (255), Expect = 1e-20
Identities = 55/84 (65%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP+ SP SP+YSP+SPSYSPSSP+YSPSSP S SP YSPSSPQ++P S
Sbjct: 1730 PTSPSYSPSSPSCSPASPTYSPSSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPQYTPASA 1789
Query: 311 GYSP-----SQPGYSPSSTSQYTP 255
YSP S P YSP TSQY+P
Sbjct: 1790 NYSPPSPLHSSPAYSP--TSQYSP 1811
Score = 102 bits (253), Expect = 2e-20
Identities = 51/79 (64%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YS SP YSPTSP YS +SPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1562 PASPSYSAASPRYSPTSPGYSASSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 1621
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ PGYSP+S S Y+P
Sbjct: 1622 SYSPTSPGYSPTSPS-YSP 1639
Score = 101 bits (251), Expect = 3e-20
Identities = 54/93 (58%), Positives = 64/93 (68%), Gaps = 13/93 (13%)
Frame = -3
Query: 485 PSSPY-SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSP---------- 339
PSSP SP SP YSP+SPSYSP+SPSYSPSSP+YSPSSP S SP Y+P
Sbjct: 1737 PSSPSCSPASPTYSPSSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPQYTPASANYSPPSP 1796
Query: 338 --SSPQFSPSTGYSPSQPGYSPSSTSQYTPQTN 246
SSP +SP++ YSP+ P Y SS + YTPQ+N
Sbjct: 1797 LHSSPAYSPTSQYSPTSPAYGASSPA-YTPQSN 1828
Score = 99.8 bits (247), Expect = 9e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSP+YS P+SP YSP+SP S SP YSP+SP
Sbjct: 1590 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPGYSPTSPSYSPTSPRYSPTSP 1649
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ PGYSP+S S Y+P
Sbjct: 1650 SYSPTSPSYSPTSPGYSPTSPS-YSP 1674
Score = 98.6 bits (244), Expect = 2e-19
Identities = 52/85 (61%), Positives = 63/85 (74%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1639 PTSPRYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1698
Query: 311 GYSPSQP---GYSPS---STSQYTP 255
YSP+ P SPS ++ Y+P
Sbjct: 1699 SYSPTSPSYSPTSPSCSPTSPSYSP 1723
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/86 (62%), Positives = 63/86 (73%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1611 PTSPAYSPTSPSYSPTSPGYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPGYSPTSP 1670
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1671 SYSPTSPSYSPTSPSYSPTSPS-YSP 1695
Score = 97.1 bits (240), Expect = 6e-19
Identities = 54/88 (61%), Positives = 65/88 (73%), Gaps = 9/88 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP +YSP+SP S SP YSP+SP
Sbjct: 1667 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSCSPTSPSYSPTSP 1726
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTPQT 249
+SP S YSPS P SP+S + Y+P +
Sbjct: 1727 SYSPTSPSYSPSSPSCSPASPT-YSPSS 1753
Score = 91.7 bits (226), Expect = 2e-17
Identities = 49/85 (57%), Positives = 56/85 (65%), Gaps = 9/85 (10%)
Frame = -3
Query: 482 SSPYSP--------TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 327
S PYSP SP+YSP SPSYS SP YSP+SP YS SSP S SP YSP+SP
Sbjct: 1542 SPPYSPRSPGFDYAASPSYSPASPSYSAASPRYSPTSPGYSASSPSYSPTSPSYSPTSPS 1601
Query: 326 FSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1602 YSPTSPSYSPTSPAYSPTSPS-YSP 1625
Score = 90.9 bits (224), Expect = 4e-17
Identities = 48/86 (55%), Positives = 57/86 (66%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSPYSPTSPNYSP--------TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P YSP+SP YSP SPSYSP SPSYS +SP YSP+SP S SP YSP+SP
Sbjct: 1534 PHRGYSPSSPPYSPRSPGFDYAASPSYSPASPSYSAASPRYSPTSPGYSASSPSYSPTSP 1593
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + Y+P
Sbjct: 1594 SYSPTSPSYSPTSPSYSPTSPA-YSP 1618
Score = 82.0 bits (201), Expect = 2e-14
Identities = 48/104 (46%), Positives = 61/104 (58%), Gaps = 27/104 (25%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSP---------- 339
P+SP YSP+SP+YSP+SPSYSP+SPSYSPSSP+YSPSSP + S +YSP
Sbjct: 1744 PASPTYSPSSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPQYTPASANYSPPSPLHSSPAY 1803
Query: 338 ---------------SSPQFSPSTGYSP-SQPGYSPSSTSQYTP 255
SSP ++P + SP S P + S SQ +P
Sbjct: 1804 SPTSQYSPTSPAYGASSPAYTPQSNLSPASLPSPALSPVSQKSP 1847
Score = 60.5 bits (145), Expect = 6e-08
Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Frame = -3
Query: 434 SYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFS-PSTGYSPSQPGYSPSSTSQY 261
S+SP YSPSSP YSP SP ++ SP YSP+SP +S S YSP+ PGYS SS S Y
Sbjct: 1531 SFSPHR-GYSPSSPPYSPRSPGFDYAASPSYSPASPSYSAASPRYSPTSPGYSASSPS-Y 1588
Query: 260 TP 255
+P
Sbjct: 1589 SP 1590
Score = 57.4 bits (137), Expect = 5e-07
Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
PSSP Y+P S NYSP SP +S SP+YSP+S YSP+SP SP Y+P S SP++
Sbjct: 1779 PSSPQYTPASANYSPPSPLHS--SPAYSPTS-QYSPTSPAYGASSPAYTPQS-NLSPASL 1834
Query: 308 YSPSQPGYSPSSTSQ 264
SP+ S S Q
Sbjct: 1835 PSPALSPVSQKSPPQ 1849
[27][TOP]
>UniRef100_A7S8F9 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
RepID=A7S8F9_NEMVE
Length = 1929
Score = 114 bits (285), Expect = 3e-24
Identities = 55/81 (67%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP 1767
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSPS P YSP S S +P +
Sbjct: 1768 SYSPSSPSYSPQSPSYASPSS 1788
Score = 112 bits (279), Expect = 2e-23
Identities = 54/78 (69%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
PSS YSP SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1625 PSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1684
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1685 YSPTSPSYSPTSPS-YSP 1701
Score = 112 bits (279), Expect = 2e-23
Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1746
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSP+S S Y+P +
Sbjct: 1747 SYSPTSPSYSPTSPS-YSPSS 1766
Score = 112 bits (279), Expect = 2e-23
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSPSSP +SPS+
Sbjct: 1715 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSP 1774
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP P Y+ S+ +Y+P
Sbjct: 1775 SYSPQSPSYASPSSPKYSP 1793
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1704
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1705 SYSPTSPSYSPTSPS-YSP 1722
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1725
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1726 SYSPTSPSYSPTSPS-YSP 1743
Score = 110 bits (276), Expect = 4e-23
Identities = 55/79 (69%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP SP+YSPTSP YSPTSP+YSP+SP+YSPSSP S SP Y+P+SP +SP S
Sbjct: 1786 PSSPKYSPASPSYSPTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPSYSPASP 1845
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS P YSPSS +YTP
Sbjct: 1846 SYSPSSPSYSPSS-PRYTP 1863
Score = 107 bits (268), Expect = 3e-22
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP YSPTSP+YSP SPSYSPSSP YSP+SP + SP YSP+SP +SPS+
Sbjct: 1793 PASPSYSPTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSP 1852
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS P Y+P+S QY+P
Sbjct: 1853 SYSPSSPRYTPTS-PQYSP 1870
Score = 107 bits (266), Expect = 5e-22
Identities = 53/81 (65%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP YSPTSPSY+P SPSYSP+SP+YSPSSP S SP Y+P+SPQ+SP S
Sbjct: 1814 PASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPSSPRYTPTSPQYSPTSP 1873
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSP +T YTP +
Sbjct: 1874 KYSPASPNYSP-TTPSYTPMS 1893
Score = 106 bits (264), Expect = 9e-22
Identities = 58/94 (61%), Positives = 66/94 (70%), Gaps = 17/94 (18%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP--------YNSGVSPDYSPSS 333
P+SP YSPTSP+YSPTSPSYSPTSPSYSPSSP+YSPSSP Y S SP YSP+S
Sbjct: 1736 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQSPSYASPSSPKYSPAS 1795
Query: 332 PQFSP--------STGYSPSQPGYSPSSTSQYTP 255
P +SP S YSP+ P YSPSS +Y+P
Sbjct: 1796 PSYSPTSPKYSPTSPNYSPASPSYSPSS-PKYSP 1828
Score = 105 bits (263), Expect = 1e-21
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF-SPST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSPSSP S SP YSP SP + SPS+
Sbjct: 1729 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQSPSYASPSS 1788
Query: 311 -GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1789 PKYSPASPSYSPTS-PKYSP 1807
Score = 105 bits (262), Expect = 2e-21
Identities = 51/79 (64%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSPNYSP SPSYSP+SP YSP+SP+Y+P+SP S SP YSPSSP +SPS+
Sbjct: 1800 PTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPSSP 1859
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S +Y+P
Sbjct: 1860 RYTPTSPQYSPTS-PKYSP 1877
Score = 105 bits (261), Expect = 2e-21
Identities = 58/88 (65%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP +YSP+SP S SP YSP+SP
Sbjct: 1694 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1753
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTPQT 249
+SP S YSPS P YSPSS S Y+PQ+
Sbjct: 1754 SYSPTSPSYSPSSPSYSPSSPS-YSPQS 1780
Score = 103 bits (256), Expect = 8e-21
Identities = 53/81 (65%), Positives = 64/81 (79%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPN--YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP- 318
P+SP YSP+SP+ YSP SPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP
Sbjct: 1615 PTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 317 STGYSPSQPGYSPSSTSQYTP 255
S YSP+ P YSP+S S Y+P
Sbjct: 1675 SPSYSPTSPSYSPTSPS-YSP 1694
Score = 100 bits (250), Expect = 4e-20
Identities = 51/82 (62%), Positives = 60/82 (73%), Gaps = 3/82 (3%)
Frame = -3
Query: 485 PSSPY--SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP SP+SP YSP SPSYSPTSP YSP+SP YSP+SP S SP YSP+SP ++P S
Sbjct: 1778 PQSPSYASPSSPKYSPASPSYSPTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPAS 1837
Query: 314 TGYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSPSS S Y+P +
Sbjct: 1838 PSYSPASPSYSPSSPS-YSPSS 1858
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1631 PASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1691 SYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1712 SYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1732
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1733 SYSPTSPSYSPTSPSYSPTSPS-YSP 1757
Score = 92.8 bits (229), Expect = 1e-17
Identities = 48/79 (60%), Positives = 58/79 (73%), Gaps = 3/79 (3%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN--SGVSPDYSPSSPQFSP-ST 312
S YSP+SP + P+SPS SP SPSYSP+SP YSPSSP + S SP YSP+SP +SP S
Sbjct: 1589 SPGYSPSSPAFMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSP 1648
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1649 SYSPTSPSYSPTSPS-YSP 1666
Score = 90.5 bits (223), Expect = 5e-17
Identities = 51/84 (60%), Positives = 61/84 (72%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPS--YSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 315
P+SP YSPTSP YSP+SPS YSP SPSYSP+SP+YSP+SP S SP YSP+SP +SP+
Sbjct: 1608 PASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 314 TGYSPSQP----GYSPSSTSQYTP 255
SPS YSP+S S Y+P
Sbjct: 1668 ---SPSYSPTSPSYSPTSPS-YSP 1687
Score = 86.3 bits (212), Expect = 1e-15
Identities = 37/61 (60%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSP SP+YSP+SPSYSP+SP Y+P+SP YSP+SP S SP+YSP++P ++P +G
Sbjct: 1835 PASPSYSPASPSYSPSSPSYSPSSPRYTPTSPQYSPTSPKYSPASPNYSPTTPSYTPMSG 1894
Query: 308 Y 306
+
Sbjct: 1895 H 1895
Score = 80.9 bits (198), Expect = 4e-14
Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSPYSPT----SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPD--YSPSSPQF 324
P+SPY P+ SP YSP+SP++ P+SPS SP+SP+YSP+SP S SP YSP+SP
Sbjct: 1577 PTSPYIPSPAAASPGYSPSSPAFMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPS- 1635
Query: 323 SPSTGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1636 -----YSPTSPSYSPTSPS-YSP 1652
Score = 72.0 bits (175), Expect = 2e-11
Identities = 43/76 (56%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Frame = -3
Query: 479 SPYSPTSPN-YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYS 303
+P SP SP SP PS + SP YSPSSP + PSSP S SP YSP+SP +SPS S
Sbjct: 1568 TPGSPVSPGPTSPYIPSPAAASPGYSPSSPAFMPSSPSMSPASPSYSPTSPGYSPS---S 1624
Query: 302 PSQPGYSPSSTSQYTP 255
PS GYSP+S S Y+P
Sbjct: 1625 PSS-GYSPASPS-YSP 1638
Score = 68.2 bits (165), Expect = 3e-10
Identities = 33/57 (57%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 318
PSSP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+ +P Y+P S P
Sbjct: 1849 PSSPSYSPSSPRYTPTSPQYSPTSPKYSPASPNYSPT-------TPSYTPMSGHIVP 1898
Score = 57.8 bits (138), Expect = 4e-07
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 22/97 (22%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS---------YSPTSPSYSPSSPTY-SPSSPY---NSGVSPDYSP 339
S +P + ++SP++ S +SP+ S +P SP P+SPY + SP YSP
Sbjct: 1535 SGMTPGAASFSPSAASDASGMSPGGFSPSWMSPTPGSPVSPGPTSPYIPSPAAASPGYSP 1594
Query: 338 SSPQFSPST--------GYSPSQPGYSPSS-TSQYTP 255
SSP F PS+ YSP+ PGYSPSS +S Y+P
Sbjct: 1595 SSPAFMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSP 1631
[28][TOP]
>UniRef100_B4E3V7 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4E3V7_HUMAN
Length = 1935
Score = 114 bits (285), Expect = 3e-24
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1701 PTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1760
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSPSS +YTPQ+
Sbjct: 1761 SYSPTSPSYSPSS-PRYTPQS 1780
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1617 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1676
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1677 SYSPTSPSYSPTSPS-YSP 1694
Score = 111 bits (277), Expect = 3e-23
Identities = 54/77 (70%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
SS YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1598 SSNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1657
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1658 SPTSPSYSPTSPS-YSP 1673
Score = 110 bits (275), Expect = 5e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTS NYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1589 PTSPSYSPTSSNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1648
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1649 SYSPTSPSYSPTSPS-YSP 1666
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1638 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1697
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1698 SYSPTSPSYSPTSPN-YSP 1715
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1718
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1719 NYTPTSPSYSPTSPS-YSP 1736
Score = 109 bits (272), Expect = 1e-22
Identities = 54/85 (63%), Positives = 67/85 (78%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 1736 PTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1795
Query: 311 GYSPSQPGYSPS------STSQYTP 255
YSP+ P Y+P+ S+ +YTP
Sbjct: 1796 SYSPTSPKYTPTSPPYSPSSPEYTP 1820
Score = 108 bits (271), Expect = 1e-22
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP + SP YSP+SP +SP S
Sbjct: 1680 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 1739
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1740 NYTPTSPNYSPTSPS-YSP 1757
Score = 107 bits (266), Expect = 5e-22
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTS +YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1575 PQSPSYSPTSPSYSPTSPSYSPTSSNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1634
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1635 SYSPTSPSYSPTSPS-YSP 1652
Score = 106 bits (264), Expect = 9e-22
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1715 PTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 1774
Query: 311 -------GYSPSQPGYSPSSTSQYTP 255
Y+PS P YSPSS S Y+P
Sbjct: 1775 RYTPQSPTYTPSSPSYSPSSPS-YSP 1799
Score = 103 bits (257), Expect = 6e-21
Identities = 52/80 (65%), Positives = 61/80 (76%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+S YSP+SP S SP YSP+SP +SP S
Sbjct: 1567 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSSNYSPTSPSYSPTSPSYSPTSPSYSPTS 1626
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1627 PSYSPTSPSYSPTSPS-YSP 1645
Score = 103 bits (257), Expect = 6e-21
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPT P+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1827 PTSPKYSPTSPKYSPTGPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1886
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1887 QYSPTSPTYSPTSPKGSTYSP 1907
Score = 101 bits (251), Expect = 3e-20
Identities = 50/79 (63%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
PSSP YSP+SP+YSPTSP Y+PTSP YSPSSP Y+P+SP S SP YSP+SP++SP+
Sbjct: 1785 PSSPSYSPSSPSYSPTSPKYTPTSPPYSPSSPEYTPTSPKFSPTSPKYSPTSPKYSPTGP 1844
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1845 TYSPTTPKYSPTSPT-YSP 1862
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1603 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1662
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1663 SYSPTSPSYSPTSPSYSPTSPS-YSP 1687
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1624 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1684 SYSPTSPSYSPTSPSYSPTSPS-YSP 1708
Score = 100 bits (249), Expect = 5e-20
Identities = 47/76 (61%), Positives = 59/76 (77%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+ P YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1841 PTGPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPQYSPTSPTYSPTSP 1900
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 1901 KGSTYSPTSPGYSPTS 1916
Score = 99.4 bits (246), Expect = 1e-19
Identities = 54/86 (62%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1704
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P Y+P+S S Y+P
Sbjct: 1705 SYSPTSPNYSPTSPNYTPTSPS-YSP 1729
Score = 98.6 bits (244), Expect = 2e-19
Identities = 47/79 (59%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1764 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPPYSPSSPEYTPTSP 1823
Query: 311 GYSPSQPGYSPSSTSQYTP 255
+SP+ P YSP+S +Y+P
Sbjct: 1824 KFSPTSPKYSPTS-PKYSP 1841
Score = 97.4 bits (241), Expect = 4e-19
Identities = 52/86 (60%), Positives = 66/86 (76%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP+Y+P+SP
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSP 1725
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P Y+P+S + Y+P
Sbjct: 1726 SYSPTSPSYSPTSPNYTPTSPN-YSP 1750
Score = 97.1 bits (240), Expect = 6e-19
Identities = 47/84 (55%), Positives = 58/84 (69%), Gaps = 8/84 (9%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP----- 318
S PYSP+SP Y+PTSP +SPTSP YSP+SP YSP+ P S +P YSP+SP +SP
Sbjct: 1808 SPPYSPSSPEYTPTSPKFSPTSPKYSPTSPKYSPTGPTYSPTTPKYSPTSPTYSPTSPVY 1867
Query: 317 ---STGYSPSQPGYSPSSTSQYTP 255
S YSP+ P YSP+S QY+P
Sbjct: 1868 TPTSPKYSPTSPTYSPTS-PQYSP 1890
Score = 94.7 bits (234), Expect = 3e-18
Identities = 51/86 (59%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P SP
Sbjct: 1722 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSP 1781
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
++PS+ YSPS P YSP+S +YTP
Sbjct: 1782 TYTPSSPSYSPSSPSYSPTS-PKYTP 1806
Score = 94.4 bits (233), Expect = 4e-18
Identities = 53/98 (54%), Positives = 63/98 (64%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+S
Sbjct: 1542 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSSNY 1601
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1602 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1638
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/85 (56%), Positives = 62/85 (72%), Gaps = 6/85 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFS 321
PSSP Y+P SP Y+P+SPSYSP+SPSYSP+SP Y+P SP SP+Y+P+SP+FS
Sbjct: 1771 PSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPPYSP----SSPEYTPTSPKFS 1826
Query: 320 P-STGYSPSQPGYSPSSTSQYTPQT 249
P S YSP+ P YSP+ + Y+P T
Sbjct: 1827 PTSPKYSPTSPKYSPTGPT-YSPTT 1850
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1855 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPQYSPTSPTYSPTSPKGSTYSPTSP---- 1910
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + +P +D++
Sbjct: 1911 --GYSPTSPTYSLTSPA-ISPDDSDEE 1934
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPS 315
+S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P
Sbjct: 1516 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPR 1568
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 1569 SPGGYTPQSPSYSPTSPS-YSP 1589
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1502 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1558
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P Y P S YTPQ+
Sbjct: 1559 SPTSPAYEPRSPGGYTPQS 1577
[29][TOP]
>UniRef100_B4DET1 cDNA FLJ53860, highly similar to DNA-directed RNA polymerase II
largest subunit (EC 2.7.7.6) n=1 Tax=Homo sapiens
RepID=B4DET1_HUMAN
Length = 855
Score = 114 bits (285), Expect = 3e-24
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 635 PTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 694
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSPSS +YTPQ+
Sbjct: 695 SYSPTSPSYSPSS-PRYTPQS 714
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 523 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 582
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 583 SYSPTSPSYSPTSPS-YSP 600
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 544 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 603
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 604 SYSPTSPSYSPTSPS-YSP 621
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 565 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 624
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 625 SYSPTSPSYSPTSPS-YSP 642
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 586 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 645
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S S Y+P
Sbjct: 646 NYSPTSPNYTPTSPS-YSP 663
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 509 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 568
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 569 SYSPTSPSYSPTSPS-YSP 586
Score = 108 bits (271), Expect = 1e-22
Identities = 53/79 (67%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 670 PTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 729
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S +Y+P
Sbjct: 730 SYSPTSPKYTPTS-PKYSP 747
Score = 108 bits (270), Expect = 2e-22
Identities = 52/79 (65%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 607 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP 666
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S + Y+P
Sbjct: 667 SYSPTSPNYTPTSPN-YSP 684
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 501 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 560
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 561 PSYSPTSPSYSPTSPS-YSP 579
Score = 106 bits (264), Expect = 9e-22
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 649 PTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 708
Query: 311 -------GYSPSQPGYSPSSTSQYTP 255
Y+PS P YSPSS S Y+P
Sbjct: 709 RYTPQSPTYTPSSPSYSPSSPS-YSP 733
Score = 103 bits (257), Expect = 6e-21
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+ P +SP S
Sbjct: 747 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTGPTYSPTSP 806
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 807 KYSPTSPTYSPTSPKGSTYSP 827
Score = 102 bits (254), Expect = 1e-20
Identities = 50/81 (61%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSP+SP Y+P SP+Y+PSSP+YSPSSP S SP Y+P+SP++SP S
Sbjct: 691 PTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPKYSPTSP 750
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSP+S + Y+P T
Sbjct: 751 KYSPTSPKYSPTSPT-YSPTT 770
Score = 101 bits (252), Expect = 2e-20
Identities = 50/79 (63%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+T
Sbjct: 712 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 771
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S YTP
Sbjct: 772 KYSPTSPTYSPTS-PVYTP 789
Score = 101 bits (252), Expect = 2e-20
Identities = 50/79 (63%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 733 PTSPKYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 792
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 793 KYSPTGPTYSPTS-PKYSP 810
Score = 100 bits (250), Expect = 4e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 572 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 631
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + YTP
Sbjct: 632 SYSPTSPSYSPTSPNYSPTSPN-YTP 656
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 530 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 589
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 590 SYSPTSPSYSPTSPSYSPTSPS-YSP 614
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 551 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 610
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 611 SYSPTSPSYSPTSPSYSPTSPS-YSP 635
Score = 100 bits (249), Expect = 5e-20
Identities = 53/85 (62%), Positives = 63/85 (74%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP+
Sbjct: 593 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 652
Query: 314 --TGYSPSQPGYSPS---STSQYTP 255
T SPS SPS ++ YTP
Sbjct: 653 NYTPTSPSYSPTSPSYSPTSPNYTP 677
Score = 100 bits (248), Expect = 7e-20
Identities = 47/76 (61%), Positives = 59/76 (77%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+ P S SP YSP+SP +SP+
Sbjct: 761 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTGPTYSPTSPKYSPTSPTYSPTSP 820
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 821 KGSTYSPTSPGYSPTS 836
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 476 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 535
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 536 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 572
Score = 94.7 bits (234), Expect = 3e-18
Identities = 51/86 (59%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P SP
Sbjct: 656 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSP 715
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
++PS+ YSPS P YSP+S +YTP
Sbjct: 716 TYTPSSPSYSPSSPSYSPTS-PKYTP 740
Score = 94.0 bits (232), Expect = 5e-18
Identities = 53/93 (56%), Positives = 66/93 (70%), Gaps = 16/93 (17%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSP--------------SYSPSSPTYSPSSPYNSGVSP 351
P+SP YSPTSP+YSPTSPSYSP+SP SYSPSSP+YSP+SP + SP
Sbjct: 684 PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSP 743
Query: 350 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
YSP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 744 KYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 775
Score = 87.0 bits (214), Expect = 6e-16
Identities = 47/87 (54%), Positives = 60/87 (68%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPT P+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 775 PTSPTYSPTSPVYTPTSPKYSPTGPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP---- 830
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + +P +D++
Sbjct: 831 --GYSPTSPTYSLTSPA-ISPDDSDEE 854
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPS 315
+S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P
Sbjct: 450 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPR 502
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 503 SPGGYTPQSPSYSPTSPS-YSP 523
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 436 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 492
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P Y P S YTPQ+
Sbjct: 493 SPTSPAYEPRSPGGYTPQS 511
[30][TOP]
>UniRef100_A6NN93 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=A6NN93_HUMAN
Length = 1970
Score = 114 bits (285), Expect = 3e-24
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1736 PTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1795
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSPSS +YTPQ+
Sbjct: 1796 SYSPTSPSYSPSS-PRYTPQS 1815
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1684 SYSPTSPSYSPTSPS-YSP 1701
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1704
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1705 SYSPTSPSYSPTSPS-YSP 1722
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1725
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1726 SYSPTSPSYSPTSPS-YSP 1743
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1746
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S S Y+P
Sbjct: 1747 NYSPTSPNYTPTSPS-YSP 1764
Score = 110 bits (275), Expect = 5e-23
Identities = 55/85 (64%), Positives = 67/85 (78%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 1771 PTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1830
Query: 311 GYSPSQPGYSPSSTS------QYTP 255
YSP+ P Y+P+S S +YTP
Sbjct: 1831 SYSPASPKYTPTSPSYSPSSPEYTP 1855
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1669
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1670 SYSPTSPSYSPTSPS-YSP 1687
Score = 108 bits (270), Expect = 2e-22
Identities = 52/79 (65%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP 1767
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S + Y+P
Sbjct: 1768 SYSPTSPNYTPTSPN-YSP 1785
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 106 bits (264), Expect = 9e-22
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1750 PTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 1809
Query: 311 -------GYSPSQPGYSPSSTSQYTP 255
Y+PS P YSPSS S Y+P
Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPS-YSP 1834
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1862 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1921
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1922 KYSPTSPTYSPTSPKGSTYSP 1942
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1848 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1907
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1908 KYSPTSPTYSPTS-PKYSP 1925
Score = 102 bits (255), Expect = 1e-20
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP+YSP SP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1820 PSSPSYSPSSPSYSPASPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1879
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1880 TYSPTTPKYSPTSPT-YSP 1897
Score = 101 bits (252), Expect = 2e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1876 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1935
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 1936 KGSTYSPTSPGYSPTS 1951
Score = 100 bits (250), Expect = 4e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1732
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + YTP
Sbjct: 1733 SYSPTSPSYSPTSPNYSPTSPN-YTP 1757
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1691 SYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1712 SYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 100 bits (249), Expect = 5e-20
Identities = 53/85 (62%), Positives = 63/85 (74%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP+
Sbjct: 1694 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1753
Query: 314 --TGYSPSQPGYSPS---STSQYTP 255
T SPS SPS ++ YTP
Sbjct: 1754 NYTPTSPSYSPTSPSYSPTSPNYTP 1778
Score = 100 bits (249), Expect = 5e-20
Identities = 48/79 (60%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1799 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPASPKYTPTSPSYSPSSPEYTPTSP 1858
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1859 KYSPTSPKYSPTS-PKYSP 1876
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1841 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP 1900
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S + Y+P
Sbjct: 1901 VYTPTSPKYSPTSPT-YSP 1918
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 94.7 bits (234), Expect = 3e-18
Identities = 51/86 (59%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P SP
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSP 1816
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
++PS+ YSPS P YSP+S +YTP
Sbjct: 1817 TYTPSSPSYSPSSPSYSPAS-PKYTP 1841
Score = 92.4 bits (228), Expect = 1e-17
Identities = 46/80 (57%), Positives = 60/80 (75%), Gaps = 5/80 (6%)
Frame = -3
Query: 479 SPYSPTS----PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
+P SPT P+YSP+SPSYSP SP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1812 TPQSPTYTPSSPSYSPSSPSYSPASPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS 1871
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP +T +Y+P
Sbjct: 1872 PKYSPTSPTYSP-TTPKYSP 1890
Score = 90.5 bits (223), Expect = 5e-17
Identities = 50/83 (60%), Positives = 59/83 (71%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFS 321
PSSP YSP SP Y+PTSPSYSP+SP Y+P+SP YSP SP SP YSP+SP +S
Sbjct: 1827 PSSPSYSPASPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYS 1882
Query: 320 PST-GYSPSQPGYSPSSTSQYTP 255
P+T YSP+ P YSP+S YTP
Sbjct: 1883 PTTPKYSPTSPTYSPTS-PVYTP 1904
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1890 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP---- 1945
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + +P +D++
Sbjct: 1946 --GYSPTSPTYSLTSPA-ISPDDSDEE 1969
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPS 315
+S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P
Sbjct: 1551 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPR 1603
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 1604 SPGGYTPQSPSYSPTSPS-YSP 1624
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1537 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1593
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P Y P S YTPQ+
Sbjct: 1594 SPTSPAYEPRSPGGYTPQS 1612
[31][TOP]
>UniRef100_C8Z6G2 Rpo21p n=1 Tax=Saccharomyces cerevisiae EC1118 RepID=C8Z6G2_YEAST
Length = 1733
Score = 114 bits (285), Expect = 3e-24
Identities = 55/84 (65%), Positives = 69/84 (82%), Gaps = 2/84 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1642 PTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1701
Query: 311 GYSPSQPGYSPSSTSQYTPQTNDQ 240
YSP+ PGYSP S + Y+P+ ++Q
Sbjct: 1702 SYSPTSPGYSPGSPA-YSPKQDEQ 1724
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1551 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1610
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1611 SYSPTSPSYSPTSPS-YSP 1628
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1572 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1631
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1632 SYSPTSPSYSPTSPS-YSP 1649
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1593 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1652
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1653 SYSPTSPAYSPTSPS-YSP 1670
Score = 110 bits (276), Expect = 4e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1614 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSP 1673
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1674 SYSPTSPSYSPTSPS-YSP 1691
Score = 110 bits (275), Expect = 5e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1544 PTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1603
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1604 SYSPTSPSYSPTSPS-YSP 1621
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1621 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSP 1680
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1681 SYSPTSPSYSPTSPN-YSP 1698
Score = 107 bits (266), Expect = 5e-22
Identities = 53/78 (67%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
SSP +SPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1538 SSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1597
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1598 YSPTSPSYSPTSPS-YSP 1614
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1558 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1617
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1618 SYSPTSPSYSPTSPSYSPTSPS-YSP 1642
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1600 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1659
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1660 AYSPTSPSYSPTSPSYSPTSPS-YSP 1684
Score = 99.8 bits (247), Expect = 9e-20
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1579 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1638
Query: 311 GYSPSQP---GYSPS---STSQYTP 255
YSP+ P SPS ++ Y+P
Sbjct: 1639 SYSPTSPSYSPTSPSYSPTSPAYSP 1663
Score = 99.4 bits (246), Expect = 1e-19
Identities = 48/79 (60%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP + +SP +SPTSP+YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1530 PTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1589
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1590 SYSPTSPSYSPTSPS-YSP 1607
Score = 92.0 bits (227), Expect = 2e-17
Identities = 43/73 (58%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Frame = -3
Query: 470 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQ 294
+PTSP + +SP +SPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S YSP+
Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1588
Query: 293 PGYSPSSTSQYTP 255
P YSP+S S Y+P
Sbjct: 1589 PSYSPTSPS-YSP 1600
[32][TOP]
>UniRef100_C7GKZ2 Rpo21p n=2 Tax=Saccharomyces cerevisiae RepID=C7GKZ2_YEAS2
Length = 1733
Score = 114 bits (285), Expect = 3e-24
Identities = 55/84 (65%), Positives = 69/84 (82%), Gaps = 2/84 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1642 PTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1701
Query: 311 GYSPSQPGYSPSSTSQYTPQTNDQ 240
YSP+ PGYSP S + Y+P+ ++Q
Sbjct: 1702 SYSPTSPGYSPGSPA-YSPKQDEQ 1724
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1551 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1610
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1611 SYSPTSPSYSPTSPS-YSP 1628
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1572 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1631
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1632 SYSPTSPSYSPTSPS-YSP 1649
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1593 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1652
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1653 SYSPTSPAYSPTSPS-YSP 1670
Score = 110 bits (276), Expect = 4e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1614 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSP 1673
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1674 SYSPTSPSYSPTSPS-YSP 1691
Score = 110 bits (275), Expect = 5e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1544 PTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1603
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1604 SYSPTSPSYSPTSPS-YSP 1621
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1621 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSP 1680
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1681 SYSPTSPSYSPTSPN-YSP 1698
Score = 107 bits (266), Expect = 5e-22
Identities = 53/78 (67%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
SSP +SPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1538 SSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1597
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1598 YSPTSPSYSPTSPS-YSP 1614
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1558 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1617
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1618 SYSPTSPSYSPTSPSYSPTSPS-YSP 1642
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1600 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1659
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1660 AYSPTSPSYSPTSPSYSPTSPS-YSP 1684
Score = 99.8 bits (247), Expect = 9e-20
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1579 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1638
Query: 311 GYSPSQP---GYSPS---STSQYTP 255
YSP+ P SPS ++ Y+P
Sbjct: 1639 SYSPTSPSYSPTSPSYSPTSPAYSP 1663
Score = 99.4 bits (246), Expect = 1e-19
Identities = 48/79 (60%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP + +SP +SPTSP+YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1530 PTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1589
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1590 SYSPTSPSYSPTSPS-YSP 1607
Score = 92.0 bits (227), Expect = 2e-17
Identities = 43/73 (58%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Frame = -3
Query: 470 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQ 294
+PTSP + +SP +SPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S YSP+
Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1588
Query: 293 PGYSPSSTSQYTP 255
P YSP+S S Y+P
Sbjct: 1589 PSYSPTSPS-YSP 1600
[33][TOP]
>UniRef100_B3LH31 DNA-directed RNA polymerase n=1 Tax=Saccharomyces cerevisiae RM11-1a
RepID=B3LH31_YEAS1
Length = 1733
Score = 114 bits (285), Expect = 3e-24
Identities = 55/84 (65%), Positives = 69/84 (82%), Gaps = 2/84 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1642 PTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1701
Query: 311 GYSPSQPGYSPSSTSQYTPQTNDQ 240
YSP+ PGYSP S + Y+P+ ++Q
Sbjct: 1702 SYSPTSPGYSPGSPA-YSPKQDEQ 1724
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1551 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1610
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1611 SYSPTSPSYSPTSPS-YSP 1628
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1572 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1631
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1632 SYSPTSPSYSPTSPS-YSP 1649
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1593 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1652
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1653 SYSPTSPAYSPTSPS-YSP 1670
Score = 110 bits (276), Expect = 4e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1614 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSP 1673
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1674 SYSPTSPSYSPTSPS-YSP 1691
Score = 110 bits (275), Expect = 5e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1544 PTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1603
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1604 SYSPTSPSYSPTSPS-YSP 1621
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1621 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSP 1680
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1681 SYSPTSPSYSPTSPN-YSP 1698
Score = 107 bits (266), Expect = 5e-22
Identities = 53/78 (67%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
SSP +SPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1538 SSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1597
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1598 YSPTSPSYSPTSPS-YSP 1614
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1558 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1617
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1618 SYSPTSPSYSPTSPSYSPTSPS-YSP 1642
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1600 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1659
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1660 AYSPTSPSYSPTSPSYSPTSPS-YSP 1684
Score = 99.8 bits (247), Expect = 9e-20
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1579 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1638
Query: 311 GYSPSQP---GYSPS---STSQYTP 255
YSP+ P SPS ++ Y+P
Sbjct: 1639 SYSPTSPSYSPTSPSYSPTSPAYSP 1663
Score = 99.4 bits (246), Expect = 1e-19
Identities = 48/79 (60%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP + +SP +SPTSP+YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1530 PTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1589
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1590 SYSPTSPSYSPTSPS-YSP 1607
[34][TOP]
>UniRef100_P04050 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Saccharomyces
cerevisiae RepID=RPB1_YEAST
Length = 1733
Score = 114 bits (285), Expect = 3e-24
Identities = 55/84 (65%), Positives = 69/84 (82%), Gaps = 2/84 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1642 PTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1701
Query: 311 GYSPSQPGYSPSSTSQYTPQTNDQ 240
YSP+ PGYSP S + Y+P+ ++Q
Sbjct: 1702 SYSPTSPGYSPGSPA-YSPKQDEQ 1724
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1551 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1610
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1611 SYSPTSPSYSPTSPS-YSP 1628
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1572 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1631
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1632 SYSPTSPSYSPTSPS-YSP 1649
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1593 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1652
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1653 SYSPTSPAYSPTSPS-YSP 1670
Score = 110 bits (276), Expect = 4e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1614 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSP 1673
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1674 SYSPTSPSYSPTSPS-YSP 1691
Score = 110 bits (275), Expect = 5e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1544 PTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1603
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1604 SYSPTSPSYSPTSPS-YSP 1621
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1621 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSP 1680
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1681 SYSPTSPSYSPTSPN-YSP 1698
Score = 107 bits (266), Expect = 5e-22
Identities = 53/78 (67%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
SSP +SPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1538 SSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1597
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1598 YSPTSPSYSPTSPS-YSP 1614
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1558 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1617
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1618 SYSPTSPSYSPTSPSYSPTSPS-YSP 1642
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1600 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1659
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1660 AYSPTSPSYSPTSPSYSPTSPS-YSP 1684
Score = 99.8 bits (247), Expect = 9e-20
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1579 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1638
Query: 311 GYSPSQP---GYSPS---STSQYTP 255
YSP+ P SPS ++ Y+P
Sbjct: 1639 SYSPTSPSYSPTSPSYSPTSPAYSP 1663
Score = 99.4 bits (246), Expect = 1e-19
Identities = 48/79 (60%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP + +SP +SPTSP+YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1530 PTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1589
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1590 SYSPTSPSYSPTSPS-YSP 1607
Score = 92.0 bits (227), Expect = 2e-17
Identities = 43/73 (58%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Frame = -3
Query: 470 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQ 294
+PTSP + +SP +SPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S YSP+
Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1588
Query: 293 PGYSPSSTSQYTP 255
P YSP+S S Y+P
Sbjct: 1589 PSYSPTSPS-YSP 1600
[35][TOP]
>UniRef100_P08775 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Mus musculus
RepID=RPB1_MOUSE
Length = 1970
Score = 114 bits (285), Expect = 3e-24
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1736 PTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1795
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSPSS +YTPQ+
Sbjct: 1796 SYSPTSPSYSPSS-PRYTPQS 1815
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1684 SYSPTSPSYSPTSPS-YSP 1701
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1704
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1705 SYSPTSPSYSPTSPS-YSP 1722
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1725
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1726 SYSPTSPSYSPTSPS-YSP 1743
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1746
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S S Y+P
Sbjct: 1747 NYSPTSPNYTPTSPS-YSP 1764
Score = 110 bits (275), Expect = 5e-23
Identities = 55/85 (64%), Positives = 67/85 (78%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 1771 PTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1830
Query: 311 GYSPSQPGYSPSSTS------QYTP 255
YSP+ P Y+P+S S +YTP
Sbjct: 1831 SYSPTSPKYTPTSPSYSPSSPEYTP 1855
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1669
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1670 SYSPTSPSYSPTSPS-YSP 1687
Score = 108 bits (270), Expect = 2e-22
Identities = 52/79 (65%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP 1767
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S + Y+P
Sbjct: 1768 SYSPTSPNYTPTSPN-YSP 1785
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 106 bits (264), Expect = 9e-22
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1750 PTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 1809
Query: 311 -------GYSPSQPGYSPSSTSQYTP 255
Y+PS P YSPSS S Y+P
Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPS-YSP 1834
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1862 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1921
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1922 KYSPTSPTYSPTSPKGSTYSP 1942
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1820 PSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSP 1879
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1880 TYSPTTPKYSPTSPT-YSP 1897
Score = 102 bits (253), Expect = 2e-20
Identities = 49/79 (62%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1813 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSP 1872
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP +T +Y+P
Sbjct: 1873 KYSPTSPTYSP-TTPKYSP 1890
Score = 102 bits (253), Expect = 2e-20
Identities = 50/79 (63%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP YSPTSP+YSP++P YSP+SP S SP Y+P+SP++SP S
Sbjct: 1855 PASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSP 1914
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1915 TYSPTSPKYSPTSPT-YSP 1932
Score = 101 bits (252), Expect = 2e-20
Identities = 50/79 (63%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+P SP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1848 PSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1907
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1908 KYSPTSPTYSPTS-PKYSP 1925
Score = 101 bits (252), Expect = 2e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1876 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1935
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 1936 KGSTYSPTSPGYSPTS 1951
Score = 100 bits (250), Expect = 4e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1732
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + YTP
Sbjct: 1733 SYSPTSPSYSPTSPNYSPTSPN-YTP 1757
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1691 SYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1712 SYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 100 bits (249), Expect = 5e-20
Identities = 53/85 (62%), Positives = 63/85 (74%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP+
Sbjct: 1694 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1753
Query: 314 --TGYSPSQPGYSPS---STSQYTP 255
T SPS SPS ++ YTP
Sbjct: 1754 NYTPTSPSYSPTSPSYSPTSPNYTP 1778
Score = 100 bits (249), Expect = 5e-20
Identities = 48/79 (60%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1799 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASP 1858
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1859 KYSPTSPKYSPTS-PKYSP 1876
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 96.7 bits (239), Expect = 7e-19
Identities = 47/79 (59%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+P SP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1841 PTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP 1900
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S + Y+P
Sbjct: 1901 VYTPTSPKYSPTSPT-YSP 1918
Score = 94.7 bits (234), Expect = 3e-18
Identities = 51/86 (59%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P SP
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSP 1816
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
++PS+ YSPS P YSP+S +YTP
Sbjct: 1817 TYTPSSPSYSPSSPSYSPTS-PKYTP 1841
Score = 92.4 bits (228), Expect = 1e-17
Identities = 51/83 (61%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFS 321
PSSP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP SP SP YSP+SP +S
Sbjct: 1827 PSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSP----TSPKYSPTSPTYS 1882
Query: 320 PST-GYSPSQPGYSPSSTSQYTP 255
P+T YSP+ P YSP+S YTP
Sbjct: 1883 PTTPKYSPTSPTYSPTS-PVYTP 1904
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1890 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP---- 1945
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + +P +D++
Sbjct: 1946 --GYSPTSPTYSLTSPA-ISPDDSDEE 1969
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPS 315
+S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P
Sbjct: 1551 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPR 1603
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 1604 SPGGYTPQSPSYSPTSPS-YSP 1624
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1537 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1593
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P Y P S YTPQ+
Sbjct: 1594 SPTSPAYEPRSPGGYTPQS 1612
[36][TOP]
>UniRef100_P24928 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Euarchontoglires
RepID=RPB1_HUMAN
Length = 1970
Score = 114 bits (285), Expect = 3e-24
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1736 PTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1795
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSPSS +YTPQ+
Sbjct: 1796 SYSPTSPSYSPSS-PRYTPQS 1815
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1684 SYSPTSPSYSPTSPS-YSP 1701
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1704
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1705 SYSPTSPSYSPTSPS-YSP 1722
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1725
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1726 SYSPTSPSYSPTSPS-YSP 1743
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1746
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S S Y+P
Sbjct: 1747 NYSPTSPNYTPTSPS-YSP 1764
Score = 110 bits (275), Expect = 5e-23
Identities = 55/85 (64%), Positives = 67/85 (78%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 1771 PTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1830
Query: 311 GYSPSQPGYSPSSTS------QYTP 255
YSP+ P Y+P+S S +YTP
Sbjct: 1831 SYSPTSPKYTPTSPSYSPSSPEYTP 1855
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1669
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1670 SYSPTSPSYSPTSPS-YSP 1687
Score = 108 bits (270), Expect = 2e-22
Identities = 52/79 (65%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP 1767
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S + Y+P
Sbjct: 1768 SYSPTSPNYTPTSPN-YSP 1785
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 106 bits (264), Expect = 9e-22
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1750 PTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 1809
Query: 311 -------GYSPSQPGYSPSSTSQYTP 255
Y+PS P YSPSS S Y+P
Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPS-YSP 1834
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1862 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1921
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1922 KYSPTSPTYSPTSPKGSTYSP 1942
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1820 PSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1879
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1880 TYSPTTPKYSPTSPT-YSP 1897
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1848 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1907
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1908 KYSPTSPTYSPTS-PKYSP 1925
Score = 102 bits (253), Expect = 2e-20
Identities = 49/79 (62%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1813 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1872
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP +T +Y+P
Sbjct: 1873 KYSPTSPTYSP-TTPKYSP 1890
Score = 101 bits (252), Expect = 2e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1876 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1935
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 1936 KGSTYSPTSPGYSPTS 1951
Score = 100 bits (250), Expect = 4e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1732
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + YTP
Sbjct: 1733 SYSPTSPSYSPTSPNYSPTSPN-YTP 1757
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1691 SYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1712 SYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 100 bits (249), Expect = 5e-20
Identities = 53/85 (62%), Positives = 63/85 (74%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP+
Sbjct: 1694 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1753
Query: 314 --TGYSPSQPGYSPS---STSQYTP 255
T SPS SPS ++ YTP
Sbjct: 1754 NYTPTSPSYSPTSPSYSPTSPNYTP 1778
Score = 100 bits (249), Expect = 5e-20
Identities = 48/79 (60%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1799 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSP 1858
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1859 KYSPTSPKYSPTS-PKYSP 1876
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1841 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP 1900
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S + Y+P
Sbjct: 1901 VYTPTSPKYSPTSPT-YSP 1918
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 94.7 bits (234), Expect = 3e-18
Identities = 51/86 (59%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P SP
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSP 1816
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
++PS+ YSPS P YSP+S +YTP
Sbjct: 1817 TYTPSSPSYSPSSPSYSPTS-PKYTP 1841
Score = 92.4 bits (228), Expect = 1e-17
Identities = 51/83 (61%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFS 321
PSSP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP SP SP YSP+SP +S
Sbjct: 1827 PSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYS 1882
Query: 320 PST-GYSPSQPGYSPSSTSQYTP 255
P+T YSP+ P YSP+S YTP
Sbjct: 1883 PTTPKYSPTSPTYSPTS-PVYTP 1904
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1890 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP---- 1945
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + +P +D++
Sbjct: 1946 --GYSPTSPTYSLTSPA-ISPDDSDEE 1969
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPS 315
+S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P
Sbjct: 1551 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPR 1603
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 1604 SPGGYTPQSPSYSPTSPS-YSP 1624
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1537 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1593
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P Y P S YTPQ+
Sbjct: 1594 SPTSPAYEPRSPGGYTPQS 1612
[37][TOP]
>UniRef100_P11414 DNA-directed RNA polymerase II subunit RPB1 (Fragment) n=1
Tax=Cricetulus griseus RepID=RPB1_CRIGR
Length = 467
Score = 114 bits (285), Expect = 3e-24
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 233 PTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 292
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSPSS +YTPQ+
Sbjct: 293 SYSPTSPSYSPSS-PRYTPQS 312
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 121 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 180
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 181 SYSPTSPSYSPTSPS-YSP 198
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 142 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 201
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 202 SYSPTSPSYSPTSPS-YSP 219
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 163 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 222
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 223 SYSPTSPSYSPTSPS-YSP 240
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 184 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 243
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S S Y+P
Sbjct: 244 NYSPTSPNYTPTSPS-YSP 261
Score = 110 bits (275), Expect = 5e-23
Identities = 55/85 (64%), Positives = 67/85 (78%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 268 PTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 327
Query: 311 GYSPSQPGYSPSSTS------QYTP 255
YSP+ P Y+P+S S +YTP
Sbjct: 328 SYSPTSPKYTPTSPSYSPSSPEYTP 352
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 107 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 166
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 167 SYSPTSPSYSPTSPS-YSP 184
Score = 108 bits (270), Expect = 2e-22
Identities = 52/79 (65%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 205 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP 264
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S + Y+P
Sbjct: 265 SYSPTSPNYTPTSPN-YSP 282
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 99 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 158
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 159 PSYSPTSPSYSPTSPS-YSP 177
Score = 106 bits (264), Expect = 9e-22
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 247 PTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 306
Query: 311 -------GYSPSQPGYSPSSTSQYTP 255
Y+PS P YSPSS S Y+P
Sbjct: 307 RYTPQSPTYTPSSPSYSPSSPS-YSP 331
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 359 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 418
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 419 KYSPTSPTYSPTSPKGSTYSP 439
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 317 PSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 376
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 377 TYSPTTPKYSPTSPT-YSP 394
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 345 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 404
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 405 KYSPTSPTYSPTS-PKYSP 422
Score = 102 bits (253), Expect = 2e-20
Identities = 49/79 (62%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 310 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 369
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP +T +Y+P
Sbjct: 370 KYSPTSPTYSP-TTPKYSP 387
Score = 101 bits (252), Expect = 2e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 373 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 432
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 433 KGSTYSPTSPGYSPTS 448
Score = 100 bits (250), Expect = 4e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 170 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 229
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + YTP
Sbjct: 230 SYSPTSPSYSPTSPNYSPTSPN-YTP 254
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 128 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 187
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 188 SYSPTSPSYSPTSPSYSPTSPS-YSP 212
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 149 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 208
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 209 SYSPTSPSYSPTSPSYSPTSPS-YSP 233
Score = 100 bits (249), Expect = 5e-20
Identities = 53/85 (62%), Positives = 63/85 (74%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP+
Sbjct: 191 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 250
Query: 314 --TGYSPSQPGYSPS---STSQYTP 255
T SPS SPS ++ YTP
Sbjct: 251 NYTPTSPSYSPTSPSYSPTSPNYTP 275
Score = 100 bits (249), Expect = 5e-20
Identities = 48/79 (60%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 296 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSP 355
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 356 KYSPTSPKYSPTS-PKYSP 373
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 338 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP 397
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S + Y+P
Sbjct: 398 VYTPTSPKYSPTSPT-YSP 415
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 74 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 133
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 134 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 170
Score = 94.7 bits (234), Expect = 3e-18
Identities = 51/86 (59%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P SP
Sbjct: 254 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSP 313
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
++PS+ YSPS P YSP+S +YTP
Sbjct: 314 TYTPSSPSYSPSSPSYSPTS-PKYTP 338
Score = 92.4 bits (228), Expect = 1e-17
Identities = 51/83 (61%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFS 321
PSSP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP SP SP YSP+SP +S
Sbjct: 324 PSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYS 379
Query: 320 PST-GYSPSQPGYSPSSTSQYTP 255
P+T YSP+ P YSP+S YTP
Sbjct: 380 PTTPKYSPTSPTYSPTS-PVYTP 401
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 387 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP---- 442
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + +P +D++
Sbjct: 443 --GYSPTSPTYSLTSPA-ISPDDSDEE 466
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPS 315
+S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P
Sbjct: 48 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPR 100
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 101 SPGGYTPQSPSYSPTSPS-YSP 121
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 34 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 90
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P Y P S YTPQ+
Sbjct: 91 SPTSPAYEPRSPGGYTPQS 109
[38][TOP]
>UniRef100_UPI0000E48673 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 1 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48673
Length = 1880
Score = 114 bits (284), Expect = 4e-24
Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1663 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP 1722
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSP+S S Y+PQ+
Sbjct: 1723 KYSPTSPSYSPTSPS-YSPQS 1742
Score = 112 bits (281), Expect = 1e-23
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSPSSP++SP S
Sbjct: 1670 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSP 1729
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP S S Y+P
Sbjct: 1730 SYSPTSPSYSPQSPS-YSP 1747
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1586 PASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1645
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1646 SYSPTSPSYSPTSPS-YSP 1663
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1607 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1666
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1667 SYSPTSPSYSPTSPS-YSP 1684
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1628 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1687
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1688 SYSPTSPSYSPTSPS-YSP 1705
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1649 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1708
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSPSS +Y+P
Sbjct: 1709 SYSPTSPSYSPSS-PKYSP 1726
Score = 111 bits (277), Expect = 3e-23
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP+YSPTSPSYSPTSP++SPSSPTYSP+SP S SP YSPSSP++SP S
Sbjct: 1754 PSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSP 1813
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1814 TYSPTSPKYSPASPT-YSP 1831
Score = 110 bits (274), Expect = 6e-23
Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1677 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSP 1736
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP P YSP S S Y+P +
Sbjct: 1737 SYSPQSPSYSPGSPS-YSPSS 1756
Score = 110 bits (274), Expect = 6e-23
Identities = 56/79 (70%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP+YSPTSPSYSP SPSYSP SP+YSPSSP S SP YSP+SP +SP S
Sbjct: 1719 PSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSP 1778
Query: 311 GYSPSQPGYSPSSTSQYTP 255
+SPS P YSP+S S Y+P
Sbjct: 1779 NFSPSSPTYSPASPS-YSP 1796
Score = 108 bits (270), Expect = 2e-22
Identities = 52/78 (66%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
PS YSPTSP+YSPTSP YSP SPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1566 PSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1625
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1626 YSPTSPSYSPTSPS-YSP 1642
Score = 107 bits (266), Expect = 5e-22
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P SP YSP+SP YSPTSPSYSPTSPSYSP+SP +SPSSP S SP YSP+SP++SPS+
Sbjct: 1747 PGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSP 1806
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1807 KYSPTSPTYSPTS-PKYSP 1824
Score = 106 bits (264), Expect = 9e-22
Identities = 51/73 (69%), Positives = 60/73 (82%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSP+SP YSPTSPSYSP+SP+YSP SP S SP YSPSSP++SP S
Sbjct: 1705 PTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSP 1764
Query: 311 GYSPSQPGYSPSS 273
YSP+ P YSP+S
Sbjct: 1765 SYSPTSPSYSPTS 1777
Score = 105 bits (262), Expect = 2e-21
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 7/91 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPTSP YSP+SP YSPTSP+YSP+SP YSP+SP S SP YSPSSP +SP+
Sbjct: 1789 PASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSP 1848
Query: 314 --TGYSPSQPGYSPSST--SQYTPQTNDQDE 234
+ YSP+ P YSP+S S +P D DE
Sbjct: 1849 KGSTYSPTSPSYSPTSPSYSPTSPGMGDDDE 1879
Score = 103 bits (256), Expect = 8e-21
Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP +SP+SP YSP SPSYSPTSP YSPSSP YSP+SP S SP YSP+SP +SP S
Sbjct: 1775 PTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSP 1834
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSPS P YSP+S S Y+P
Sbjct: 1835 KYSPSSPTYSPTSPKGSTYSP 1855
Score = 102 bits (254), Expect = 1e-20
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSP SP+YSP+SP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1740 PQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSP 1799
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS P YSP+S + Y+P
Sbjct: 1800 KYSPSSPKYSPTSPT-YSP 1817
Score = 100 bits (250), Expect = 4e-20
Identities = 55/88 (62%), Positives = 66/88 (75%), Gaps = 9/88 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1635 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1694
Query: 311 GYSPSQP-------GYSPSSTSQYTPQT 249
YSP+ P YSP+S S Y+P +
Sbjct: 1695 SYSPTSPSYSPTSPSYSPTSPS-YSPSS 1721
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1593 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1652
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1653 SYSPTSPSYSPTSPSYSPTSPS-YSP 1677
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1614 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1673
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1674 SYSPTSPSYSPTSPSYSPTSPS-YSP 1698
Score = 99.4 bits (246), Expect = 1e-19
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP SP
Sbjct: 1691 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSP 1750
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
+SPS+ YSP+ P YSP+S S Y+P
Sbjct: 1751 SYSPSSPKYSPTSPSYSPTSPS-YSP 1775
Score = 98.2 bits (243), Expect = 2e-19
Identities = 54/86 (62%), Positives = 63/86 (73%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSP SPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1572 PTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1631
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1632 SYSPTSPSYSPTSPSYSPTSPS-YSP 1656
Score = 87.8 bits (216), Expect = 3e-16
Identities = 46/75 (61%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Frame = -3
Query: 476 PYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSP 300
P SP SP SP YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S YSP
Sbjct: 1560 PQSPGSP-----SPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSP 1614
Query: 299 SQPGYSPSSTSQYTP 255
+ P YSP+S S Y+P
Sbjct: 1615 TSPSYSPTSPS-YSP 1628
Score = 79.0 bits (193), Expect = 2e-13
Identities = 42/78 (53%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Frame = -3
Query: 482 SSPYSPT-SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
S+ +SP SP +SP S SP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1545 STGFSPAYSPAWSPQPQSPGSPSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPS 1604
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1605 YSPTSPSYSPTSPS-YSP 1621
Score = 60.8 bits (146), Expect = 4e-08
Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSP--SSPTYSPSSPYN--SGVSPDYSPSSPQFSP-S 315
S +P P +SP + + SP+YSP S SP SP S SP YSP+SP +SP S
Sbjct: 1529 SGMTPGGPGFSPANSESTGFSPAYSPAWSPQPQSPGSPSPGYSPTSPSYSPTSPGYSPAS 1588
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1589 PSYSPTSPSYSPTSPS-YSP 1607
[39][TOP]
>UniRef100_UPI0000E48672 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 2 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48672
Length = 1913
Score = 114 bits (284), Expect = 4e-24
Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1696 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP 1755
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSP+S S Y+PQ+
Sbjct: 1756 KYSPTSPSYSPTSPS-YSPQS 1775
Score = 112 bits (281), Expect = 1e-23
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSPSSP++SP S
Sbjct: 1703 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSP 1762
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP S S Y+P
Sbjct: 1763 SYSPTSPSYSPQSPS-YSP 1780
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1619 PASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1678
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1679 SYSPTSPSYSPTSPS-YSP 1696
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1640 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1699
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1700 SYSPTSPSYSPTSPS-YSP 1717
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1661 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1720
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1721 SYSPTSPSYSPTSPS-YSP 1738
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1682 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1741
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSPSS +Y+P
Sbjct: 1742 SYSPTSPSYSPSS-PKYSP 1759
Score = 111 bits (277), Expect = 3e-23
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP+YSPTSPSYSPTSP++SPSSPTYSP+SP S SP YSPSSP++SP S
Sbjct: 1787 PSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSP 1846
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1847 TYSPTSPKYSPASPT-YSP 1864
Score = 110 bits (274), Expect = 6e-23
Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1710 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSP 1769
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP P YSP S S Y+P +
Sbjct: 1770 SYSPQSPSYSPGSPS-YSPSS 1789
Score = 110 bits (274), Expect = 6e-23
Identities = 56/79 (70%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP+YSPTSPSYSP SPSYSP SP+YSPSSP S SP YSP+SP +SP S
Sbjct: 1752 PSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSP 1811
Query: 311 GYSPSQPGYSPSSTSQYTP 255
+SPS P YSP+S S Y+P
Sbjct: 1812 NFSPSSPTYSPASPS-YSP 1829
Score = 109 bits (273), Expect = 8e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1612 PTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1671
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1672 SYSPTSPSYSPTSPS-YSP 1689
Score = 107 bits (267), Expect = 4e-22
Identities = 51/78 (65%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
P+SP +P SP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1592 PASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1651
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1652 YSPTSPSYSPTSPS-YSP 1668
Score = 107 bits (266), Expect = 5e-22
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P SP YSP+SP YSPTSPSYSPTSPSYSP+SP +SPSSP S SP YSP+SP++SPS+
Sbjct: 1780 PGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSP 1839
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1840 KYSPTSPTYSPTS-PKYSP 1857
Score = 106 bits (264), Expect = 9e-22
Identities = 51/73 (69%), Positives = 60/73 (82%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSP+SP YSPTSPSYSP+SP+YSP SP S SP YSPSSP++SP S
Sbjct: 1738 PTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSP 1797
Query: 311 GYSPSQPGYSPSS 273
YSP+ P YSP+S
Sbjct: 1798 SYSPTSPSYSPTS 1810
Score = 105 bits (262), Expect = 2e-21
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 7/91 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPTSP YSP+SP YSPTSP+YSP+SP YSP+SP S SP YSPSSP +SP+
Sbjct: 1822 PASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSP 1881
Query: 314 --TGYSPSQPGYSPSST--SQYTPQTNDQDE 234
+ YSP+ P YSP+S S +P D DE
Sbjct: 1882 KGSTYSPTSPSYSPTSPSYSPTSPGMGDDDE 1912
Score = 103 bits (256), Expect = 8e-21
Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP +SP+SP YSP SPSYSPTSP YSPSSP YSP+SP S SP YSP+SP +SP S
Sbjct: 1808 PTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSP 1867
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSPS P YSP+S S Y+P
Sbjct: 1868 KYSPSSPTYSPTSPKGSTYSP 1888
Score = 102 bits (254), Expect = 1e-20
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSP SP+YSP+SP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1773 PQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSP 1832
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS P YSP+S + Y+P
Sbjct: 1833 KYSPSSPKYSPTSPT-YSP 1850
Score = 100 bits (250), Expect = 4e-20
Identities = 55/88 (62%), Positives = 66/88 (75%), Gaps = 9/88 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1668 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1727
Query: 311 GYSPSQP-------GYSPSSTSQYTPQT 249
YSP+ P YSP+S S Y+P +
Sbjct: 1728 SYSPTSPSYSPTSPSYSPTSPS-YSPSS 1754
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1626 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1685
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1686 SYSPTSPSYSPTSPSYSPTSPS-YSP 1710
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1647 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1706
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1707 SYSPTSPSYSPTSPSYSPTSPS-YSP 1731
Score = 99.4 bits (246), Expect = 1e-19
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP SP
Sbjct: 1724 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSP 1783
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
+SPS+ YSP+ P YSP+S S Y+P
Sbjct: 1784 SYSPSSPKYSPTSPSYSPTSPS-YSP 1808
Score = 97.1 bits (240), Expect = 6e-19
Identities = 52/82 (63%), Positives = 61/82 (74%), Gaps = 5/82 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP YSP SPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP+
Sbjct: 1605 PTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT-- 1662
Query: 308 YSPSQP----GYSPSSTSQYTP 255
SPS YSP+S S Y+P
Sbjct: 1663 -SPSYSPTSPSYSPTSPS-YSP 1682
Score = 96.3 bits (238), Expect = 9e-19
Identities = 51/85 (60%), Positives = 60/85 (70%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNY------SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 327
P SP YSP SP+Y +P SP YSPTSPSYSP+SP YSP+SP S SP YSP+SP
Sbjct: 1578 PMSPSYSPASPSYLPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPS 1637
Query: 326 FSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1638 YSPTSPSYSPTSPSYSPTSPS-YSP 1661
Score = 74.3 bits (181), Expect = 4e-12
Identities = 44/82 (53%), Positives = 55/82 (67%), Gaps = 8/82 (9%)
Frame = -3
Query: 476 PYSPTSPNYSPTSPSYS-PTSPSYSPSSPTY---SPSSPYNSG---VSPDYSPSSPQFSP 318
P SP SP SP PS + P SPSYSP+SP+Y SP++P + G SP YSP+SP +SP
Sbjct: 1560 PQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASPATPQSPGYSPTSPSYSPTSPGYSP 1619
Query: 317 -STGYSPSQPGYSPSSTSQYTP 255
S YSP+ P YSP+S S Y+P
Sbjct: 1620 ASPSYSPTSPSYSPTSPS-YSP 1640
[40][TOP]
>UniRef100_UPI0000E48671 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 3 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48671
Length = 1921
Score = 114 bits (284), Expect = 4e-24
Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1704 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP 1763
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSP+S S Y+PQ+
Sbjct: 1764 KYSPTSPSYSPTSPS-YSPQS 1783
Score = 112 bits (281), Expect = 1e-23
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSPSSP++SP S
Sbjct: 1711 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSP 1770
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP S S Y+P
Sbjct: 1771 SYSPTSPSYSPQSPS-YSP 1788
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1627 PASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1686
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1687 SYSPTSPSYSPTSPS-YSP 1704
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1648 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1707
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1708 SYSPTSPSYSPTSPS-YSP 1725
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1669 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1728
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1729 SYSPTSPSYSPTSPS-YSP 1746
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1690 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1749
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSPSS +Y+P
Sbjct: 1750 SYSPTSPSYSPSS-PKYSP 1767
Score = 111 bits (277), Expect = 3e-23
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP+YSPTSPSYSPTSP++SPSSPTYSP+SP S SP YSPSSP++SP S
Sbjct: 1795 PSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSP 1854
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1855 TYSPTSPKYSPASPT-YSP 1872
Score = 110 bits (274), Expect = 6e-23
Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1718 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSP 1777
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP P YSP S S Y+P +
Sbjct: 1778 SYSPQSPSYSPGSPS-YSPSS 1797
Score = 110 bits (274), Expect = 6e-23
Identities = 56/79 (70%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP+YSPTSPSYSP SPSYSP SP+YSPSSP S SP YSP+SP +SP S
Sbjct: 1760 PSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSP 1819
Query: 311 GYSPSQPGYSPSSTSQYTP 255
+SPS P YSP+S S Y+P
Sbjct: 1820 NFSPSSPTYSPASPS-YSP 1837
Score = 109 bits (273), Expect = 8e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1620 PTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1679
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1680 SYSPTSPSYSPTSPS-YSP 1697
Score = 107 bits (267), Expect = 4e-22
Identities = 51/78 (65%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
P+SP +P SP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1600 PASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1659
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1660 YSPTSPSYSPTSPS-YSP 1676
Score = 107 bits (266), Expect = 5e-22
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P SP YSP+SP YSPTSPSYSPTSPSYSP+SP +SPSSP S SP YSP+SP++SPS+
Sbjct: 1788 PGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSP 1847
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1848 KYSPTSPTYSPTS-PKYSP 1865
Score = 106 bits (264), Expect = 9e-22
Identities = 51/73 (69%), Positives = 60/73 (82%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSP+SP YSPTSPSYSP+SP+YSP SP S SP YSPSSP++SP S
Sbjct: 1746 PTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSP 1805
Query: 311 GYSPSQPGYSPSS 273
YSP+ P YSP+S
Sbjct: 1806 SYSPTSPSYSPTS 1818
Score = 105 bits (262), Expect = 2e-21
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 7/91 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPTSP YSP+SP YSPTSP+YSP+SP YSP+SP S SP YSPSSP +SP+
Sbjct: 1830 PASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSP 1889
Query: 314 --TGYSPSQPGYSPSST--SQYTPQTNDQDE 234
+ YSP+ P YSP+S S +P D DE
Sbjct: 1890 KGSTYSPTSPSYSPTSPSYSPTSPGMGDDDE 1920
Score = 103 bits (256), Expect = 8e-21
Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP +SP+SP YSP SPSYSPTSP YSPSSP YSP+SP S SP YSP+SP +SP S
Sbjct: 1816 PTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSP 1875
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSPS P YSP+S S Y+P
Sbjct: 1876 KYSPSSPTYSPTSPKGSTYSP 1896
Score = 102 bits (254), Expect = 1e-20
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSP SP+YSP+SP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1781 PQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSP 1840
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS P YSP+S + Y+P
Sbjct: 1841 KYSPSSPKYSPTSPT-YSP 1858
Score = 100 bits (250), Expect = 4e-20
Identities = 55/88 (62%), Positives = 66/88 (75%), Gaps = 9/88 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1676 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1735
Query: 311 GYSPSQP-------GYSPSSTSQYTPQT 249
YSP+ P YSP+S S Y+P +
Sbjct: 1736 SYSPTSPSYSPTSPSYSPTSPS-YSPSS 1762
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1634 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1693
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1694 SYSPTSPSYSPTSPSYSPTSPS-YSP 1718
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1655 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1714
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1715 SYSPTSPSYSPTSPSYSPTSPS-YSP 1739
Score = 99.4 bits (246), Expect = 1e-19
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP SP
Sbjct: 1732 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSP 1791
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
+SPS+ YSP+ P YSP+S S Y+P
Sbjct: 1792 SYSPSSPKYSPTSPSYSPTSPS-YSP 1816
Score = 97.1 bits (240), Expect = 6e-19
Identities = 52/82 (63%), Positives = 61/82 (74%), Gaps = 5/82 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP YSP SPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP+
Sbjct: 1613 PTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT-- 1670
Query: 308 YSPSQP----GYSPSSTSQYTP 255
SPS YSP+S S Y+P
Sbjct: 1671 -SPSYSPTSPSYSPTSPS-YSP 1690
Score = 96.3 bits (238), Expect = 9e-19
Identities = 51/85 (60%), Positives = 60/85 (70%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNY------SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 327
P SP YSP SP+Y +P SP YSPTSPSYSP+SP YSP+SP S SP YSP+SP
Sbjct: 1586 PMSPSYSPASPSYLPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPS 1645
Query: 326 FSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPS-YSP 1669
Score = 74.3 bits (181), Expect = 4e-12
Identities = 44/82 (53%), Positives = 55/82 (67%), Gaps = 8/82 (9%)
Frame = -3
Query: 476 PYSPTSPNYSPTSPSYS-PTSPSYSPSSPTY---SPSSPYNSG---VSPDYSPSSPQFSP 318
P SP SP SP PS + P SPSYSP+SP+Y SP++P + G SP YSP+SP +SP
Sbjct: 1568 PQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASPATPQSPGYSPTSPSYSPTSPGYSP 1627
Query: 317 -STGYSPSQPGYSPSSTSQYTP 255
S YSP+ P YSP+S S Y+P
Sbjct: 1628 ASPSYSPTSPSYSPTSPS-YSP 1648
[41][TOP]
>UniRef100_B9WN64 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
RepID=B9WN64_CANDC
Length = 1735
Score = 114 bits (284), Expect = 4e-24
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1559 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1618
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ PGYSP+S S Y+P
Sbjct: 1619 SYSPTSPGYSPTSPS-YSP 1636
Score = 113 bits (282), Expect = 7e-24
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1622 PTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSP 1681
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1682 SYSPTSPQYSPTSPS-YSP 1699
Score = 111 bits (277), Expect = 3e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1580 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSP 1639
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1640 SYSPTSPSYSPTSPS-YSP 1657
Score = 111 bits (277), Expect = 3e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1608 PTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSP 1667
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1668 SYSPTSPQYSPTSPS-YSP 1685
Score = 110 bits (274), Expect = 6e-23
Identities = 53/78 (67%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
P YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1539 PGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1598
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1599 YSPTSPSYSPTSPS-YSP 1615
Score = 110 bits (274), Expect = 6e-23
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1650 PTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSP 1709
Query: 311 GYSPSQPGYSPSSTSQYTPQTNDQD 237
YSP+ P YSP S Y P++ +D
Sbjct: 1710 QYSPTSPRYSPGSPG-YEPKSPKKD 1733
Score = 109 bits (273), Expect = 8e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1601 PTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1660
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1661 QYSPTSPSYSPTS-PQYSP 1678
Score = 106 bits (265), Expect = 7e-22
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1643 PTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSP 1702
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1703 QYSPTSPQYSPTS-PRYSP 1720
Score = 102 bits (255), Expect = 1e-20
Identities = 56/86 (65%), Positives = 66/86 (76%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1566 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1625
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
GYSP+ P YSP+S S Y+P
Sbjct: 1626 GYSPTSPSYSPTSPSYSPTSPS-YSP 1650
Score = 102 bits (254), Expect = 1e-20
Identities = 56/86 (65%), Positives = 66/86 (76%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1629 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSP 1688
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
Q+SP S YSP+ P YSP+S QY+P
Sbjct: 1689 QYSPTSPSYSPTSPQYSPTS-PQYSP 1713
Score = 102 bits (253), Expect = 2e-20
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSP 318
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP SP
Sbjct: 1594 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSP 1653
Query: 317 STGYSPSQPGYSPSSTSQYTP 255
S YSP+ P YSP+S S Y+P
Sbjct: 1654 S--YSPTSPQYSPTSPS-YSP 1671
Score = 97.1 bits (240), Expect = 6e-19
Identities = 48/77 (62%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S Y+ YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1533 SPGYASPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1592
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1593 SPTSPSYSPTSPS-YSP 1608
Score = 89.0 bits (219), Expect = 2e-16
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYS-----PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 318
+SP+S TSP Y+ YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP
Sbjct: 1521 TSPFSFGYNTATSPGYASPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1580
Query: 317 -STGYSPSQPGYSPSSTSQYTP 255
S YSP+ P YSP+S S Y+P
Sbjct: 1581 TSPSYSPTSPSYSPTSPS-YSP 1601
Score = 67.8 bits (164), Expect = 4e-10
Identities = 31/43 (72%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG 360
P+SP YSPTSP YSPTSP YSPTSP YSP SP Y P SP G
Sbjct: 1692 PTSPSYSPTSPQYSPTSPQYSPTSPRYSPGSPGYEPKSPKKDG 1734
[42][TOP]
>UniRef100_UPI0001796DD3 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase II subunit A) (DNA-directed RNA polymerase III
largest subunit) n=1 Tax=Equus caballus
RepID=UPI0001796DD3
Length = 1834
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1684 SYSPTSPSYSPTSPS-YSP 1701
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1704
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1705 SYSPTSPSYSPTSPS-YSP 1722
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1725
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1726 SYSPTSPSYSPTSPS-YSP 1743
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1746
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S S Y+P
Sbjct: 1747 NYSPTSPNYTPTSPS-YSP 1764
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1669
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1670 SYSPTSPSYSPTSPS-YSP 1687
Score = 110 bits (274), Expect = 6e-23
Identities = 52/79 (65%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP+T
Sbjct: 1736 PTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTTP 1795
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S Y+P
Sbjct: 1796 SYSPTSPSYSPTSPG-YSP 1813
Score = 108 bits (270), Expect = 2e-22
Identities = 52/79 (65%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP 1767
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S + Y+P
Sbjct: 1768 SYSPTSPNYTPTSPN-YSP 1785
Score = 107 bits (266), Expect = 5e-22
Identities = 51/79 (64%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP+YSPTSP+Y+P+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1729 PTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSP 1788
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1789 SYSPTTPSYSPTSPS-YSP 1806
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 100 bits (250), Expect = 4e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1732
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + YTP
Sbjct: 1733 SYSPTSPSYSPTSPNYSPTSPN-YTP 1757
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1691 SYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1712 SYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 100 bits (249), Expect = 5e-20
Identities = 53/85 (62%), Positives = 63/85 (74%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP+
Sbjct: 1694 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1753
Query: 314 --TGYSPSQPGYSPS---STSQYTP 255
T SPS SPS ++ YTP
Sbjct: 1754 NYTPTSPSYSPTSPSYSPTSPNYTP 1778
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 96.7 bits (239), Expect = 7e-19
Identities = 52/86 (60%), Positives = 63/86 (73%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP Y+P+SP S SP YSP+SP
Sbjct: 1715 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 1774
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
++P S YSP+ P YSP +T Y+P
Sbjct: 1775 NYTPTSPNYSPTSPSYSP-TTPSYSP 1799
Score = 95.9 bits (237), Expect = 1e-18
Identities = 47/84 (55%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP+YSP++P S SP YSP+SP G
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTTPSYSPTSPSYSPTSP------G 1810
Query: 308 YSPSQPGYSPSSTSQYTPQTNDQD 237
YSP+ P YS +S + +P +D++
Sbjct: 1811 YSPTSPTYSLTSPA-ISPDDSDEE 1833
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPS 315
+S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P
Sbjct: 1551 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPR 1603
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 1604 SPGGYTPQSPSYSPTSPS-YSP 1624
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1537 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1593
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P Y P S YTPQ+
Sbjct: 1594 SPTSPAYEPRSPGGYTPQS 1612
[43][TOP]
>UniRef100_UPI0000E24648 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) n=1 Tax=Pan troglodytes RepID=UPI0000E24648
Length = 1913
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1684 SYSPTSPSYSPTSPS-YSP 1701
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1704
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1705 SYSPTSPSYSPTSPS-YSP 1722
Score = 110 bits (275), Expect = 5e-23
Identities = 57/94 (60%), Positives = 67/94 (71%), Gaps = 15/94 (15%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 318
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSQ 1725
Query: 317 -----------STGYSPSQPGYSPSSTSQYTPQT 249
S YSP+ P YSPSS +YTPQ+
Sbjct: 1726 SYHPTVVDSSTSPSYSPTSPSYSPSS-PRYTPQS 1758
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1669
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1670 SYSPTSPSYSPTSPS-YSP 1687
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1805 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1864
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1865 KYSPTSPTYSPTSPKGSTYSP 1885
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1763 PSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1822
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1823 TYSPTTPKYSPTSPT-YSP 1840
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1791 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1850
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1851 KYSPTSPTYSPTS-PKYSP 1868
Score = 103 bits (256), Expect = 8e-21
Identities = 56/99 (56%), Positives = 67/99 (67%), Gaps = 22/99 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-------------YNSGVSPD 348
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP +S SP
Sbjct: 1680 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSQSYHPTVVDSSTSPS 1739
Query: 347 YSPSSPQFSPST--------GYSPSQPGYSPSSTSQYTP 255
YSP+SP +SPS+ Y+PS P YSPSS S Y+P
Sbjct: 1740 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPS-YSP 1777
Score = 102 bits (253), Expect = 2e-20
Identities = 49/79 (62%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1756 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1815
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP +T +Y+P
Sbjct: 1816 KYSPTSPTYSP-TTPKYSP 1833
Score = 101 bits (252), Expect = 2e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1819 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1878
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 1879 KGSTYSPTSPGYSPTS 1894
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1691 SYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1784 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP 1843
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S + Y+P
Sbjct: 1844 VYTPTSPKYSPTSPT-YSP 1861
Score = 98.2 bits (243), Expect = 2e-19
Identities = 46/77 (59%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GY 306
S YSPTSP+YSP+SP Y+P SP+Y+PSSP+YSPSSP S SP Y+P+SP +SPS+ Y
Sbjct: 1737 SPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEY 1796
Query: 305 SPSQPGYSPSSTSQYTP 255
+P+ P YSP+S +Y+P
Sbjct: 1797 TPTSPKYSPTS-PKYSP 1812
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 96.7 bits (239), Expect = 7e-19
Identities = 47/78 (60%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
P+ S TSP+YSPTSPSYSP+SP Y+P SPTY+PSSP S SP YSP+SP+++P S
Sbjct: 1729 PTVVDSSTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPS 1788
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSPS P Y+P+S +Y+P
Sbjct: 1789 YSPSSPEYTPTS-PKYSP 1805
Score = 92.4 bits (228), Expect = 1e-17
Identities = 51/83 (61%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFS 321
PSSP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP SP SP YSP+SP +S
Sbjct: 1770 PSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYS 1825
Query: 320 PST-GYSPSQPGYSPSSTSQYTP 255
P+T YSP+ P YSP+S YTP
Sbjct: 1826 PTTPKYSPTSPTYSPTS-PVYTP 1847
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1833 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP---- 1888
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + +P +D++
Sbjct: 1889 --GYSPTSPTYSLTSPA-ISPDDSDEE 1912
Score = 87.4 bits (215), Expect = 4e-16
Identities = 47/88 (53%), Positives = 65/88 (73%), Gaps = 9/88 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSP+SP Y+P SP+Y+P+SPSYS P+SP Y+P+SP S SP+Y+P+SP
Sbjct: 1742 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSP 1801
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTPQT 249
++SP S YSP+ P YSP+S + Y+P T
Sbjct: 1802 KYSPTSPKYSPTSPKYSPTSPT-YSPTT 1828
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPS 315
+S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P
Sbjct: 1551 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPR 1603
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 1604 SPGGYTPQSPSYSPTSPS-YSP 1624
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1537 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1593
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P Y P S YTPQ+
Sbjct: 1594 SPTSPAYEPRSPGGYTPQS 1612
[44][TOP]
>UniRef100_UPI0000D5670C PREDICTED: similar to GA13798-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D5670C
Length = 2007
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1608 PTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1667
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1668 SYSPTSPSYSPTSPS-YSP 1685
Score = 113 bits (282), Expect = 7e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1671 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1730
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSPSS +YTP
Sbjct: 1731 SYSPTSPSYSPSS-PRYTP 1748
Score = 112 bits (281), Expect = 1e-23
Identities = 57/79 (72%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSPSSP Y+P+SP S SP YSPSSPQ+SP S
Sbjct: 1713 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPASPSYSPTSPSYSPSSPQYSPASP 1772
Query: 311 GYSPSQPGYSPSSTSQYTP 255
+SPS P YSP+S S Y+P
Sbjct: 1773 SFSPSSPKYSPTSPS-YSP 1790
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1629 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1688
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1689 SYSPTSPSYSPTSPS-YSP 1706
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1650 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1709
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1710 SYSPTSPSYSPTSPS-YSP 1727
Score = 111 bits (277), Expect = 3e-23
Identities = 56/86 (65%), Positives = 66/86 (76%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1685 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP 1744
Query: 311 -------GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSPSS QY+P
Sbjct: 1745 RYTPASPSYSPTSPSYSPSS-PQYSP 1769
Score = 108 bits (271), Expect = 1e-22
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1601 PVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1660
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1661 SYSPTSPSYSPTSPS-YSP 1678
Score = 103 bits (258), Expect = 5e-21
Identities = 54/88 (61%), Positives = 65/88 (73%), Gaps = 9/88 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--S 315
P+SP +SP+SP YSPTSPSYSPTSPS++ SP YSP+SP S SP+YSPSSPQ +P S
Sbjct: 1769 PASPSFSPSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPTSPNYSPSSPQHTPAAS 1828
Query: 314 TGYSPSQPGYSPSSTS------QYTPQT 249
+ YSPS P YSPSS S QY+P +
Sbjct: 1829 SRYSPSSPNYSPSSPSYSPTSPQYSPHS 1856
Score = 102 bits (254), Expect = 1e-20
Identities = 50/79 (63%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP +P SP YSPTSP YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1594 PTSPSMTPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1653
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1654 SYSPTSPSYSPTSPS-YSP 1671
Score = 101 bits (252), Expect = 2e-20
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 16/98 (16%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 318
P+SP YSP+SP Y+P SPSYSPTSPSYSPSSP YSP+SP S SP YSP+SP +SP
Sbjct: 1734 PTSPSYSPSSPRYTPASPSYSPTSPSYSPSSPQYSPASPSFSPSSPKYSPTSPSYSPTSP 1793
Query: 317 ------------STGYSPSQPGYSPSSTSQYTPQTNDQ 240
S YSP+ P YSPSS Q+TP + +
Sbjct: 1794 SFAGGSPQYSPTSPSYSPTSPNYSPSS-PQHTPAASSR 1830
Score = 100 bits (250), Expect = 4e-20
Identities = 55/88 (62%), Positives = 66/88 (75%), Gaps = 9/88 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1657 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1716
Query: 311 GYSPSQP-------GYSPSSTSQYTPQT 249
YSP+ P YSP+S S Y+P +
Sbjct: 1717 SYSPTSPSYSPTSPSYSPTSPS-YSPSS 1743
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1615 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1674
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1675 SYSPTSPSYSPTSPSYSPTSPS-YSP 1699
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1636 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1695
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1696 SYSPTSPSYSPTSPSYSPTSPS-YSP 1720
Score = 100 bits (248), Expect = 7e-20
Identities = 49/79 (62%), Positives = 59/79 (74%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP + PTSP+ +P SP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1587 PSSPSFQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP 1646
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1647 SYSPTSPSYSPTSPS-YSP 1664
Score = 99.0 bits (245), Expect = 1e-19
Identities = 54/86 (62%), Positives = 66/86 (76%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP +YSPSSP + SP YSP+SP
Sbjct: 1699 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPASPSYSPTSP 1758
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
+SPS+ YSP+ P +SPSS +Y+P
Sbjct: 1759 SYSPSSPQYSPASPSFSPSS-PKYSP 1783
Score = 96.3 bits (238), Expect = 9e-19
Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSP+SP++ PTSPS +P SP YSP+SP YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1582 SPSYSPSSPSFQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSY 1641
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1642 SPTSPSYSPTSPS-YSP 1657
Score = 96.3 bits (238), Expect = 9e-19
Identities = 47/77 (61%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGY 306
SS YSP+SPNYSP+SPSYSPTSP YSP S YSP+SP + SP YSP+SP +S Y
Sbjct: 1828 SSRYSPSSPNYSPSSPSYSPTSPQYSPHSTKYSPTSPTYTPTSPSYSPASPAYSSQPPRY 1887
Query: 305 SPSQPGYSPSSTSQYTP 255
SPS P YSP+S P
Sbjct: 1888 SPSSPSYSPTSPITLPP 1904
Score = 91.7 bits (226), Expect = 2e-17
Identities = 49/83 (59%), Positives = 59/83 (71%), Gaps = 2/83 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
PSSP YSPTSP YSP S YSPTSP+Y+P+SP+YSP+SP S P YSPSSP +SP++
Sbjct: 1840 PSSPSYSPTSPQYSPHSTKYSPTSPTYTPTSPSYSPASPAYSSQPPRYSPSSPSYSPTSP 1899
Query: 308 YS-PSQPGYSPSSTSQYTPQTND 243
+ P P YS SS S YT + D
Sbjct: 1900 ITLPPSPYYSRSS-STYTFSSRD 1921
Score = 88.6 bits (218), Expect = 2e-16
Identities = 58/116 (50%), Positives = 68/116 (58%), Gaps = 37/116 (31%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYN------------ 366
PSSP YSPTSP+YSPTSPS YSPTSPSYSP+SP YSPSSP +
Sbjct: 1776 PSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPTSPNYSPSSPQHTPAASSRYSPSS 1835
Query: 365 ---SGVSPDYSPSSPQFSP-STGYSPSQP----------GYSPSSTSQ---YTPQT 249
S SP YSP+SPQ+SP ST YSP+ P SP+ +SQ Y+P +
Sbjct: 1836 PNYSPSSPSYSPTSPQYSPHSTKYSPTSPTYTPTSPSYSPASPAYSSQPPRYSPSS 1891
Score = 80.1 bits (196), Expect = 7e-14
Identities = 49/92 (53%), Positives = 57/92 (61%), Gaps = 8/92 (8%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP-QFSPST 312
P+SP YSP S YSPTSP+Y+PTSPSYSP+SP YS P S SP YSP+SP PS
Sbjct: 1847 PTSPQYSPHSTKYSPTSPTYTPTSPSYSPASPAYSSQPPRYSPSSPSYSPTSPITLPPSP 1906
Query: 311 GYSPSQPGYSPS------STSQYTPQTNDQDE 234
YS S Y+ S S+ Y+P T QDE
Sbjct: 1907 YYSRSSSTYTFSSRDYTYSSPPYSP-TIPQDE 1937
Score = 78.6 bits (192), Expect = 2e-13
Identities = 42/80 (52%), Positives = 53/80 (66%), Gaps = 8/80 (10%)
Frame = -3
Query: 470 SPTSPNYSP-------TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
+P SP SP SPSYSP+SPS+ P+SP+ +P SP S SP YSP+SP +SP S
Sbjct: 1565 TPQSPAMSPFMASPHGQSPSYSPSSPSFQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTS 1624
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1625 PSYSPTSPSYSPTSPS-YSP 1643
Score = 62.4 bits (150), Expect = 2e-08
Identities = 39/91 (42%), Positives = 47/91 (51%), Gaps = 16/91 (17%)
Frame = -3
Query: 479 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 324
S +P P +SP+ SP Y SP+ P SP SP G SP YSPSSP F
Sbjct: 1535 SGMTPGGPAFSPSAASDASGMSPGYGAWSPT--PQSPAMSPFMASPHGQSPSYSPSSPSF 1592
Query: 323 SP--------STGYSPSQPGYSPSSTSQYTP 255
P S GYSP+ PGYSP+S + Y+P
Sbjct: 1593 QPTSPSMTPVSPGYSPTSPGYSPTSPN-YSP 1622
[45][TOP]
>UniRef100_UPI00005A0B2C PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 23 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2C
Length = 1888
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1623 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1682
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1683 SYSPTSPSYSPTSPS-YSP 1700
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1644 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1703
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1704 SYSPTSPSYSPTSPS-YSP 1721
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1665 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1724
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1725 SYSPTSPSYSPTSPS-YSP 1742
Score = 111 bits (277), Expect = 3e-23
Identities = 55/82 (67%), Positives = 66/82 (80%), Gaps = 5/82 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1693 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSP 1752
Query: 311 ---GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSPSS +YTP
Sbjct: 1753 TSPKYTPTSPSYSPSS-PEYTP 1773
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1668
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1669 SYSPTSPSYSPTSPS-YSP 1686
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1601 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1660
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1661 PSYSPTSPSYSPTSPS-YSP 1679
Score = 105 bits (261), Expect = 2e-21
Identities = 54/82 (65%), Positives = 66/82 (80%), Gaps = 5/82 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN---SGVSPDYSPSSPQFSP 318
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPSSP + + SP YSPSSP+++P
Sbjct: 1714 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEYTP 1773
Query: 317 -STGYSPSQPGYSPSSTSQYTP 255
S YSP+ P YSP+S +Y+P
Sbjct: 1774 TSPKYSPTSPKYSPTS-PKYSP 1794
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1780 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1839
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1840 KYSPTSPTYSPTSPKGSTYSP 1860
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1766 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1825
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1826 KYSPTSPTYSPTS-PKYSP 1843
Score = 102 bits (255), Expect = 1e-20
Identities = 52/82 (63%), Positives = 67/82 (81%), Gaps = 5/82 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY---NSGVSPDYSPSSPQFSP 318
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP +S SP Y+P+SP +SP
Sbjct: 1707 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSP 1766
Query: 317 ST-GYSPSQPGYSPSSTSQYTP 255
S+ Y+P+ P YSP+S +Y+P
Sbjct: 1767 SSPEYTPTSPKYSPTS-PKYSP 1787
Score = 101 bits (252), Expect = 2e-20
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 5/82 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSP---TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 318
P+SP YSPTSPNYSP TSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP
Sbjct: 1735 PTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSP 1794
Query: 317 -STGYSPSQPGYSPSSTSQYTP 255
S YSP+ P YSP+S + Y+P
Sbjct: 1795 TSPTYSPTTPKYSPTSPT-YSP 1815
Score = 101 bits (252), Expect = 2e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1794 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1853
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 1854 KGSTYSPTSPGYSPTS 1869
Score = 101 bits (251), Expect = 3e-20
Identities = 49/76 (64%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYS 303
SP SPTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP YSP+SP +SP+T YS
Sbjct: 1748 SPSSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYS 1807
Query: 302 PSQPGYSPSSTSQYTP 255
P+ P YSP+S YTP
Sbjct: 1808 PTSPTYSPTS-PVYTP 1822
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1630 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1689
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1690 SYSPTSPSYSPTSPSYSPTSPS-YSP 1714
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1651 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1710
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1711 SYSPTSPSYSPTSPSYSPTSPS-YSP 1735
Score = 100 bits (248), Expect = 7e-20
Identities = 51/82 (62%), Positives = 65/82 (79%), Gaps = 5/82 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSY---SPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 318
P+SP YSPTSP+YSPTSP+Y SPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP
Sbjct: 1728 PTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1787
Query: 317 -STGYSPSQPGYSPSSTSQYTP 255
S YSP+ P YSP +T +Y+P
Sbjct: 1788 TSPKYSPTSPTYSP-TTPKYSP 1808
Score = 98.6 bits (244), Expect = 2e-19
Identities = 47/79 (59%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP Y+PTSP+YSP+SP Y+PTSP YSP+SP YSP+SP S SP YSP++P++SP S
Sbjct: 1752 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSP 1811
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S +Y+P
Sbjct: 1812 TYSPTSPVYTPTS-PKYSP 1829
Score = 97.8 bits (242), Expect = 3e-19
Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP---TYSPSSPYNSGVSPDYSPSSPQFSP 318
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP P+SP S SP YSP+SP +SP
Sbjct: 1679 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS---PTSPSYSPTSPSYSPTSPSYSP 1735
Query: 317 -STGYSPSQPGYSPSS--TSQYTP 255
S YSP+ P YSPSS + +YTP
Sbjct: 1736 TSPSYSPTSPNYSPSSPTSPKYTP 1759
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1576 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1635
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1636 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1672
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1808 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP---- 1863
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + +P +D++
Sbjct: 1864 --GYSPTSPTYSLTSPA-ISPDDSDEE 1887
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPS 315
+S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P
Sbjct: 1550 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPR 1602
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 1603 SPGGYTPQSPSYSPTSPS-YSP 1623
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1536 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1592
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P Y P S YTPQ+
Sbjct: 1593 SPTSPAYEPRSPGGYTPQS 1611
[46][TOP]
>UniRef100_UPI00005A0B2B PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 22 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2B
Length = 1892
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1668
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1669 SYSPTSPSYSPTSPS-YSP 1686
Score = 112 bits (279), Expect = 2e-23
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1672 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1731
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS+P Y+P+S S Y+P
Sbjct: 1732 NYSPSRPNYTPTSPS-YSP 1749
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1630 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1689
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1690 SYSPTSPSYSPTSPS-YSP 1707
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1651 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1710
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1711 SYSPTSPSYSPTSPS-YSP 1728
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1658 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1717
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1718 SYSPTSPSYSPTSPN-YSP 1735
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1679 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRP 1738
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1739 NYTPTSPSYSPTSPS-YSP 1756
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1595 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1654
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1655 SYSPTSPSYSPTSPS-YSP 1672
Score = 109 bits (272), Expect = 1e-22
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1700 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1759
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSPSS +YTP
Sbjct: 1760 KYTPTSPSYSPSS-PEYTP 1777
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1587 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1646
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1647 PSYSPTSPSYSPTSPS-YSP 1665
Score = 105 bits (261), Expect = 2e-21
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1742 PTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1801
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1802 TYSPTTPKYSPTSPT-YSP 1819
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1784 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1843
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1844 KYSPTSPTYSPTSPKGSTYSP 1864
Score = 104 bits (260), Expect = 3e-21
Identities = 50/79 (63%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1721 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSP 1780
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1781 KYSPTSPKYSPTS-PKYSP 1798
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1770 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1829
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1830 KYSPTSPTYSPTS-PKYSP 1847
Score = 101 bits (252), Expect = 2e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1798 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1857
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 1858 KGSTYSPTSPGYSPTS 1873
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1616 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1675
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1676 SYSPTSPSYSPTSPSYSPTSPS-YSP 1700
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1637 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1696
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1697 SYSPTSPSYSPTSPSYSPTSPS-YSP 1721
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1763 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP 1822
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S + Y+P
Sbjct: 1823 VYTPTSPKYSPTSPT-YSP 1840
Score = 95.5 bits (236), Expect = 2e-18
Identities = 52/86 (60%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSP+ PNY+PTSPSYSPTSPSYSP+SP +YSPSSP + SP YSP+SP
Sbjct: 1728 PTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSP 1787
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
++SP S YSP+ P YSP +T +Y+P
Sbjct: 1788 KYSPTSPKYSPTSPTYSP-TTPKYSP 1812
Score = 95.1 bits (235), Expect = 2e-18
Identities = 51/93 (54%), Positives = 60/93 (64%), Gaps = 16/93 (17%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYNSGVSP 351
P SP SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP S SP
Sbjct: 1567 PGSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1626
Query: 350 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1627 SYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1658
Score = 94.7 bits (234), Expect = 3e-18
Identities = 51/86 (59%), Positives = 66/86 (76%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSP+YS P+SP+YSP+SP S SP Y+P+SP
Sbjct: 1707 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSP 1766
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
+SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1767 SYSPSSPEYTPTSPKYSPTS-PKYSP 1791
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1812 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP---- 1867
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + +P +D++
Sbjct: 1868 --GYSPTSPTYSLTSPA-ISPDDSDEE 1891
Score = 57.0 bits (136), Expect = 6e-07
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTY-SPSSPYNSGVSPDYSPSSPQFSPST- 312
S +P + +SP++ S S SP YSP+ SPT SP SP +SP YSP+SP + P +
Sbjct: 1532 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSP-GGAMSPSYSPTSPAYEPRSP 1590
Query: 311 -GYSPSQPGYSPSSTSQYTP 255
GY+P P YSP+S S Y+P
Sbjct: 1591 GGYTPQSPSYSPTSPS-YSP 1609
[47][TOP]
>UniRef100_UPI00005A0B2A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 21 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2A
Length = 1896
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1613 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1672
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1673 SYSPTSPSYSPTSPS-YSP 1690
Score = 112 bits (279), Expect = 2e-23
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1676 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1735
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS+P Y+P+S S Y+P
Sbjct: 1736 NYSPSRPNYTPTSPS-YSP 1753
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1634 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1693
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1694 SYSPTSPSYSPTSPS-YSP 1711
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1655 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1714
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1715 SYSPTSPSYSPTSPS-YSP 1732
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1662 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1721
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1722 SYSPTSPSYSPTSPN-YSP 1739
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1683 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRP 1742
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1743 NYTPTSPSYSPTSPS-YSP 1760
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1599 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1658
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1659 SYSPTSPSYSPTSPS-YSP 1676
Score = 109 bits (272), Expect = 1e-22
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1704 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1763
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSPSS +YTP
Sbjct: 1764 KYTPTSPSYSPSS-PEYTP 1781
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1591 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1650
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1651 PSYSPTSPSYSPTSPS-YSP 1669
Score = 105 bits (261), Expect = 2e-21
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1746 PTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1805
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1806 TYSPTTPKYSPTSPT-YSP 1823
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1788 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1847
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1848 KYSPTSPTYSPTSPKGSTYSP 1868
Score = 104 bits (260), Expect = 3e-21
Identities = 50/79 (63%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1725 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSP 1784
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1785 KYSPTSPKYSPTS-PKYSP 1802
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1774 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1833
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1834 KYSPTSPTYSPTS-PKYSP 1851
Score = 101 bits (252), Expect = 2e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1802 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1861
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 1862 KGSTYSPTSPGYSPTS 1877
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1620 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1679
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1680 SYSPTSPSYSPTSPSYSPTSPS-YSP 1704
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1641 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1700
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1701 SYSPTSPSYSPTSPSYSPTSPS-YSP 1725
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1767 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP 1826
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S + Y+P
Sbjct: 1827 VYTPTSPKYSPTSPT-YSP 1844
Score = 95.5 bits (236), Expect = 2e-18
Identities = 52/86 (60%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSP+ PNY+PTSPSYSPTSPSYSP+SP +YSPSSP + SP YSP+SP
Sbjct: 1732 PTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSP 1791
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
++SP S YSP+ P YSP +T +Y+P
Sbjct: 1792 KYSPTSPKYSPTSPTYSP-TTPKYSP 1816
Score = 95.1 bits (235), Expect = 2e-18
Identities = 51/93 (54%), Positives = 60/93 (64%), Gaps = 16/93 (17%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYNSGVSP 351
P SP SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP S SP
Sbjct: 1571 PGSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1630
Query: 350 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1631 SYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1662
Score = 94.7 bits (234), Expect = 3e-18
Identities = 51/86 (59%), Positives = 66/86 (76%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSP+YS P+SP+YSP+SP S SP Y+P+SP
Sbjct: 1711 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSP 1770
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
+SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1771 SYSPSSPEYTPTSPKYSPTS-PKYSP 1795
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1816 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP---- 1871
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + +P +D++
Sbjct: 1872 --GYSPTSPTYSLTSPA-ISPDDSDEE 1895
Score = 59.3 bits (142), Expect = 1e-07
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTY-SPSSPYNSGVSPDYSPSSPQFSPS 315
P S +P + +SP++ S S SP YSP+ SPT SP SP +SP YSP+SP + P
Sbjct: 1534 PRSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSP-GGAMSPSYSPTSPAYEPR 1592
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 1593 SPGGYTPQSPSYSPTSPS-YSP 1613
[48][TOP]
>UniRef100_UPI00005A0B29 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 20 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B29
Length = 1891
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1592 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1651
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1652 SYSPTSPSYSPTSPS-YSP 1669
Score = 112 bits (279), Expect = 2e-23
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1655 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1714
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS+P Y+P+S S Y+P
Sbjct: 1715 NYSPSRPNYTPTSPS-YSP 1732
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1613 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1672
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1673 SYSPTSPSYSPTSPS-YSP 1690
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1634 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1693
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1694 SYSPTSPSYSPTSPS-YSP 1711
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1641 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1700
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1701 SYSPTSPSYSPTSPN-YSP 1718
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1662 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRP 1721
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1722 NYTPTSPSYSPTSPS-YSP 1739
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1578 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1637
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1638 SYSPTSPSYSPTSPS-YSP 1655
Score = 109 bits (273), Expect = 8e-23
Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1683 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1742
Query: 311 GYSPSQPGYSPSSTS-QYTP 255
Y+P P YSP+ TS +YTP
Sbjct: 1743 NYTPMSPNYSPTPTSPKYTP 1762
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1570 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1629
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1630 PSYSPTSPSYSPTSPS-YSP 1648
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1783 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1842
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1843 KYSPTSPTYSPTSPKGSTYSP 1863
Score = 103 bits (257), Expect = 6e-21
Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 318
P+SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP YSP+SP ++P
Sbjct: 1690 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSP 1749
Query: 317 -------STGYSPSQPGYSPSSTSQYTP 255
S Y+P+ P YSPSS +YTP
Sbjct: 1750 NYSPTPTSPKYTPTSPSYSPSS-PEYTP 1776
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1769 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1828
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1829 KYSPTSPTYSPTS-PKYSP 1846
Score = 101 bits (252), Expect = 2e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1797 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1856
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 1857 KGSTYSPTSPGYSPTS 1872
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1599 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1658
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1659 SYSPTSPSYSPTSPSYSPTSPS-YSP 1683
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1620 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1679
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1680 SYSPTSPSYSPTSPSYSPTSPS-YSP 1704
Score = 98.6 bits (244), Expect = 2e-19
Identities = 47/79 (59%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP Y+PTSP+YSP+SP Y+PTSP YSP+SP YSP+SP S SP YSP++P++SP S
Sbjct: 1755 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSP 1814
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S +Y+P
Sbjct: 1815 TYSPTSPVYTPTS-PKYSP 1832
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1545 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1604
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1605 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1641
Score = 97.4 bits (241), Expect = 4e-19
Identities = 47/78 (60%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
P+ +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP YSP+SP +SP+T
Sbjct: 1749 PNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPK 1808
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S YTP
Sbjct: 1809 YSPTSPTYSPTS-PVYTP 1825
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1811 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP---- 1866
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + +P +D++
Sbjct: 1867 --GYSPTSPTYSLTSPA-ISPDDSDEE 1890
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPS 315
+S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P
Sbjct: 1519 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPR 1571
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 1572 SPGGYTPQSPSYSPTSPS-YSP 1592
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1505 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1561
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P Y P S YTPQ+
Sbjct: 1562 SPTSPAYEPRSPGGYTPQS 1580
[49][TOP]
>UniRef100_UPI00005A0B28 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 19 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B28
Length = 1908
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1668
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1669 SYSPTSPSYSPTSPS-YSP 1686
Score = 112 bits (279), Expect = 2e-23
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1672 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1731
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS+P Y+P+S S Y+P
Sbjct: 1732 NYSPSRPNYTPTSPS-YSP 1749
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1630 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1689
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1690 SYSPTSPSYSPTSPS-YSP 1707
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1651 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1710
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1711 SYSPTSPSYSPTSPS-YSP 1728
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1658 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1717
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1718 SYSPTSPSYSPTSPN-YSP 1735
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1679 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRP 1738
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1739 NYTPTSPSYSPTSPS-YSP 1756
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1595 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1654
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1655 SYSPTSPSYSPTSPS-YSP 1672
Score = 109 bits (273), Expect = 8e-23
Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1700 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1759
Query: 311 GYSPSQPGYSPSSTS-QYTP 255
Y+P P YSP+ TS +YTP
Sbjct: 1760 NYTPMSPNYSPTPTSPKYTP 1779
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1587 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1646
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1647 PSYSPTSPSYSPTSPS-YSP 1665
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1800 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1859
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1860 KYSPTSPTYSPTSPKGSTYSP 1880
Score = 103 bits (257), Expect = 6e-21
Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 318
P+SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP YSP+SP ++P
Sbjct: 1707 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSP 1766
Query: 317 -------STGYSPSQPGYSPSSTSQYTP 255
S Y+P+ P YSPSS +YTP
Sbjct: 1767 NYSPTPTSPKYTPTSPSYSPSS-PEYTP 1793
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1786 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1845
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1846 KYSPTSPTYSPTS-PKYSP 1863
Score = 101 bits (252), Expect = 2e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1814 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1873
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 1874 KGSTYSPTSPGYSPTS 1889
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1616 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1675
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1676 SYSPTSPSYSPTSPSYSPTSPS-YSP 1700
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1637 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1696
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1697 SYSPTSPSYSPTSPSYSPTSPS-YSP 1721
Score = 98.6 bits (244), Expect = 2e-19
Identities = 47/79 (59%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP Y+PTSP+YSP+SP Y+PTSP YSP+SP YSP+SP S SP YSP++P++SP S
Sbjct: 1772 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSP 1831
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S +Y+P
Sbjct: 1832 TYSPTSPVYTPTS-PKYSP 1849
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1562 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1621
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1622 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1658
Score = 97.4 bits (241), Expect = 4e-19
Identities = 47/78 (60%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
P+ +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP YSP+SP +SP+T
Sbjct: 1766 PNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPK 1825
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S YTP
Sbjct: 1826 YSPTSPTYSPTS-PVYTP 1842
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1828 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP---- 1883
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + +P +D++
Sbjct: 1884 --GYSPTSPTYSLTSPA-ISPDDSDEE 1907
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPS 315
+S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P
Sbjct: 1536 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPR 1588
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 1589 SPGGYTPQSPSYSPTSPS-YSP 1609
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1522 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1578
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P Y P S YTPQ+
Sbjct: 1579 SPTSPAYEPRSPGGYTPQS 1597
[50][TOP]
>UniRef100_UPI00005A0B27 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 18 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B27
Length = 1831
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1542 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1601
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1602 SYSPTSPSYSPTSPS-YSP 1619
Score = 112 bits (279), Expect = 2e-23
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1605 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1664
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS+P Y+P+S S Y+P
Sbjct: 1665 NYSPSRPNYTPTSPS-YSP 1682
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1563 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1622
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1623 SYSPTSPSYSPTSPS-YSP 1640
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1584 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1643
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1644 SYSPTSPSYSPTSPS-YSP 1661
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1591 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1650
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1651 SYSPTSPSYSPTSPN-YSP 1668
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1612 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRP 1671
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1672 NYTPTSPSYSPTSPS-YSP 1689
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1528 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1587
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1588 SYSPTSPSYSPTSPS-YSP 1605
Score = 107 bits (266), Expect = 5e-22
Identities = 53/84 (63%), Positives = 63/84 (75%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1633 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1692
Query: 311 GYSPSQPGYSPS-----STSQYTP 255
Y+P P YSP+ S+ +YTP
Sbjct: 1693 NYTPMSPNYSPTPSYSPSSPEYTP 1716
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1520 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1579
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1580 PSYSPTSPSYSPTSPS-YSP 1598
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1723 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1782
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1783 KYSPTSPTYSPTSPKGSTYSP 1803
Score = 104 bits (260), Expect = 3e-21
Identities = 47/78 (60%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSPTSP+YSP+ P+Y+P+SP+YSP+SP S SP+Y+P SP +SP+
Sbjct: 1647 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPS 1706
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSPS P Y+P+S +Y+P
Sbjct: 1707 YSPSSPEYTPTS-PKYSP 1723
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1709 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1768
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1769 KYSPTSPTYSPTS-PKYSP 1786
Score = 101 bits (252), Expect = 2e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1737 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1796
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 1797 KGSTYSPTSPGYSPTS 1812
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1549 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1608
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1609 SYSPTSPSYSPTSPSYSPTSPS-YSP 1633
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1570 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1629
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1630 SYSPTSPSYSPTSPSYSPTSPS-YSP 1654
Score = 99.0 bits (245), Expect = 1e-19
Identities = 50/85 (58%), Positives = 65/85 (76%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSPQ 327
P+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP N +P YSPSSP+
Sbjct: 1654 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPSYSPSSPE 1713
Query: 326 FSP-STGYSPSQPGYSPSSTSQYTP 255
++P S YSP+ P YSP+S +Y+P
Sbjct: 1714 YTPTSPKYSPTSPKYSPTS-PKYSP 1737
Score = 99.0 bits (245), Expect = 1e-19
Identities = 50/81 (61%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PS P Y+PTSP+YSPTSPSYSPTSP+Y+P SP YSP+ Y S SP+Y+P+SP++SP S
Sbjct: 1668 PSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPSY-SPSSPEYTPTSPKYSPTSP 1726
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSP+S + Y+P T
Sbjct: 1727 KYSPTSPKYSPTSPT-YSPTT 1746
Score = 98.2 bits (243), Expect = 2e-19
Identities = 46/78 (58%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
P+ YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1703 PTPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPV 1762
Query: 308 YSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S + Y+P
Sbjct: 1763 YTPTSPKYSPTSPT-YSP 1779
Score = 94.4 bits (233), Expect = 4e-18
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 14/93 (15%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S P+Y+P+SP
Sbjct: 1619 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1678
Query: 329 QFSP-STGYSPSQPGYSP-----SSTSQYTPQT 249
+SP S YSP+ P Y+P S T Y+P +
Sbjct: 1679 SYSPTSPSYSPTSPNYTPMSPNYSPTPSYSPSS 1711
Score = 93.2 bits (230), Expect = 8e-18
Identities = 48/85 (56%), Positives = 62/85 (72%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPT------SPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 327
P+SP Y+P SPNYSPT SP Y+PTSP YSP+SP YSP+SP S SP YSP++P+
Sbjct: 1689 PTSPNYTPMSPNYSPTPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPK 1748
Query: 326 FSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P Y+P+S +Y+P
Sbjct: 1749 YSPTSPTYSPTSPVYTPTS-PKYSP 1772
Score = 90.9 bits (224), Expect = 4e-17
Identities = 49/93 (52%), Positives = 59/93 (63%), Gaps = 16/93 (17%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYNSGVSP 351
P + SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP S SP
Sbjct: 1500 PGAAGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1559
Query: 350 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1560 SYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1591
Score = 89.4 bits (220), Expect = 1e-16
Identities = 52/86 (60%), Positives = 62/86 (72%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTS-------PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTS PNYSPT PSYSP+SP Y+P+SP YSP+SP S SP YSP+SP
Sbjct: 1682 PTSPSYSPTSPNYTPMSPNYSPT-PSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1740
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
+SP+T YSP+ P YSP+S YTP
Sbjct: 1741 TYSPTTPKYSPTSPTYSPTS-PVYTP 1765
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1751 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP---- 1806
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + +P +D++
Sbjct: 1807 --GYSPTSPTYSLTSPA-ISPDDSDEE 1830
Score = 87.8 bits (216), Expect = 3e-16
Identities = 51/86 (59%), Positives = 63/86 (73%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTS-------PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTS PNY+P SP+YSPT PSYSPSSP Y+P+SP S SP YSP+SP
Sbjct: 1675 PTSPSYSPTSPSYSPTSPNYTPMSPNYSPT-PSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1733
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
++SP S YSP+ P YSP+S + Y+P
Sbjct: 1734 KYSPTSPTYSPTTPKYSPTSPT-YSP 1758
[51][TOP]
>UniRef100_UPI00005A0B26 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 17 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B26
Length = 1684
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1519 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1578
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1579 SYSPTSPSYSPTSPS-YSP 1596
Score = 112 bits (279), Expect = 2e-23
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1582 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1641
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS+P Y+P+S S Y+P
Sbjct: 1642 NYSPSRPNYTPTSPS-YSP 1659
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1540 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1599
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1600 SYSPTSPSYSPTSPS-YSP 1617
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1561 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1620
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1621 SYSPTSPSYSPTSPS-YSP 1638
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1568 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1627
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1628 SYSPTSPSYSPTSPN-YSP 1645
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1589 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRP 1648
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1649 NYTPTSPSYSPTSPS-YSP 1666
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1505 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1564
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1565 SYSPTSPSYSPTSPS-YSP 1582
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1497 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1556
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1557 PSYSPTSPSYSPTSPS-YSP 1575
Score = 105 bits (261), Expect = 2e-21
Identities = 50/73 (68%), Positives = 58/73 (79%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1610 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1669
Query: 311 GYSPSQPGYSPSS 273
Y+P P YSP+S
Sbjct: 1670 NYTPMSPNYSPTS 1682
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1526 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1585
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1586 SYSPTSPSYSPTSPSYSPTSPS-YSP 1610
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1547 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1606
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1607 SYSPTSPSYSPTSPSYSPTSPS-YSP 1631
Score = 94.0 bits (232), Expect = 5e-18
Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S P+Y+P+SP
Sbjct: 1596 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1655
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P Y+P S + Y+P
Sbjct: 1656 SYSPTSPSYSPTSPNYTPMSPN-YSP 1680
Score = 84.3 bits (207), Expect = 4e-15
Identities = 37/53 (69%), Positives = 48/53 (90%), Gaps = 1/53 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + +SP+YSP+SP
Sbjct: 1631 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1683
Score = 76.6 bits (187), Expect = 8e-13
Identities = 40/72 (55%), Positives = 50/72 (69%), Gaps = 9/72 (12%)
Frame = -3
Query: 443 TSPSYS--------PTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP 291
TSP+Y P SPSYSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P
Sbjct: 1491 TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1550
Query: 290 GYSPSSTSQYTP 255
YSP+S S Y+P
Sbjct: 1551 SYSPTSPS-YSP 1561
[52][TOP]
>UniRef100_UPI00005A0B25 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 16 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B25
Length = 1752
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1519 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1578
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1579 SYSPTSPSYSPTSPS-YSP 1596
Score = 112 bits (279), Expect = 2e-23
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1582 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1641
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS+P Y+P+S S Y+P
Sbjct: 1642 NYSPSRPNYTPTSPS-YSP 1659
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1540 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1599
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1600 SYSPTSPSYSPTSPS-YSP 1617
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1561 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1620
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1621 SYSPTSPSYSPTSPS-YSP 1638
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1568 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1627
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1628 SYSPTSPSYSPTSPN-YSP 1645
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1589 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRP 1648
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1649 NYTPTSPSYSPTSPS-YSP 1666
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1505 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1564
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1565 SYSPTSPSYSPTSPS-YSP 1582
Score = 107 bits (268), Expect = 3e-22
Identities = 53/82 (64%), Positives = 65/82 (79%), Gaps = 5/82 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP++
Sbjct: 1610 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1669
Query: 311 --GYSPSQPGYSPSSTS-QYTP 255
YSPS P YSP+S + +Y+P
Sbjct: 1670 NYTYSPSSPSYSPTSPNPKYSP 1691
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1497 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1556
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1557 PSYSPTSPSYSPTSPS-YSP 1575
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1526 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1585
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1586 SYSPTSPSYSPTSPSYSPTSPS-YSP 1610
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1547 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1606
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1607 SYSPTSPSYSPTSPSYSPTSPS-YSP 1631
Score = 94.7 bits (234), Expect = 3e-18
Identities = 50/85 (58%), Positives = 63/85 (74%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP--YNSGVSPDYSPSSPQ---- 327
P+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP S SP YSP+SP
Sbjct: 1631 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSPNPKYS 1690
Query: 326 -FSPSTGYSPSQPGYSPSSTSQYTP 255
SP+ YSP+ P YSP+S + Y+P
Sbjct: 1691 PTSPNPTYSPTSPKYSPTSPT-YSP 1714
Score = 94.7 bits (234), Expect = 3e-18
Identities = 55/87 (63%), Positives = 65/87 (74%), Gaps = 10/87 (11%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPD--YSPSSPQ-- 327
P+SP YSP+ PNY+PTSPSYSPTSPSYSP+SP TYSPSSP S SP+ YSP+SP
Sbjct: 1638 PTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSPNPKYSPTSPNPT 1697
Query: 326 FSP-STGYSPSQPGYSPSST--SQYTP 255
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1698 YSPTSPKYSPTSPTYSPTSPKGSTYSP 1724
Score = 90.5 bits (223), Expect = 5e-17
Identities = 50/82 (60%), Positives = 62/82 (75%), Gaps = 11/82 (13%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSY--SPTSPSYSPSSPT--YSPSS--PYNSGVSPDYSPSSPQ 327
P+SP YSPTSP+YSPTSP+Y SP+SPSYSP+SP YSP+S P S SP YSP+SP
Sbjct: 1652 PTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSPNPKYSPTSPNPTYSPTSPKYSPTSPT 1711
Query: 326 FSPS----TGYSPSQPGYSPSS 273
+SP+ + YSP+ PGYSP+S
Sbjct: 1712 YSPTSPKGSTYSPTSPGYSPTS 1733
Score = 83.2 bits (204), Expect = 8e-15
Identities = 48/80 (60%), Positives = 56/80 (70%), Gaps = 6/80 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPN--YSPTSPS--YSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 321
PSSP YSPTSPN YSPTSP+ YSPTSP YSP+SPTYSP+SP S YSP+SP +S
Sbjct: 1675 PSSPSYSPTSPNPKYSPTSPNPTYSPTSPKYSPTSPTYSPTSPKGS----TYSPTSPGYS 1730
Query: 320 P-STGYSPSQPGYSPSSTSQ 264
P S YS + P SP + +
Sbjct: 1731 PTSPTYSLTSPAISPDDSDE 1750
Score = 76.6 bits (187), Expect = 8e-13
Identities = 40/72 (55%), Positives = 50/72 (69%), Gaps = 9/72 (12%)
Frame = -3
Query: 443 TSPSYS--------PTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP 291
TSP+Y P SPSYSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P
Sbjct: 1491 TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1550
Query: 290 GYSPSSTSQYTP 255
YSP+S S Y+P
Sbjct: 1551 SYSPTSPS-YSP 1561
[53][TOP]
>UniRef100_UPI00005A0B24 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 15 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B24
Length = 1924
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1625 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1684
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1685 SYSPTSPSYSPTSPS-YSP 1702
Score = 112 bits (279), Expect = 2e-23
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1688 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1747
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS+P Y+P+S S Y+P
Sbjct: 1748 NYSPSRPNYTPTSPS-YSP 1765
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1646 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1705
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1706 SYSPTSPSYSPTSPS-YSP 1723
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1667 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1726
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1727 SYSPTSPSYSPTSPS-YSP 1744
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1674 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1733
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1734 SYSPTSPSYSPTSPN-YSP 1751
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1695 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRP 1754
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1755 NYTPTSPSYSPTSPS-YSP 1772
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1611 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1670
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1671 SYSPTSPSYSPTSPS-YSP 1688
Score = 109 bits (273), Expect = 8e-23
Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1716 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1775
Query: 311 GYSPSQPGYSPSSTS-QYTP 255
Y+P P YSP+ TS +YTP
Sbjct: 1776 NYTPMSPNYSPTPTSPKYTP 1795
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1603 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1662
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1663 PSYSPTSPSYSPTSPS-YSP 1681
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1816 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1875
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1876 KYSPTSPTYSPTSPKGSTYSP 1896
Score = 103 bits (257), Expect = 6e-21
Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 318
P+SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP YSP+SP ++P
Sbjct: 1723 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSP 1782
Query: 317 -------STGYSPSQPGYSPSSTSQYTP 255
S Y+P+ P YSPSS +YTP
Sbjct: 1783 NYSPTPTSPKYTPTSPSYSPSS-PEYTP 1809
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1802 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1861
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1862 KYSPTSPTYSPTS-PKYSP 1879
Score = 101 bits (252), Expect = 2e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1830 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1889
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 1890 KGSTYSPTSPGYSPTS 1905
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1632 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1691
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1692 SYSPTSPSYSPTSPSYSPTSPS-YSP 1716
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1653 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1712
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1713 SYSPTSPSYSPTSPSYSPTSPS-YSP 1737
Score = 98.6 bits (244), Expect = 2e-19
Identities = 47/79 (59%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP Y+PTSP+YSP+SP Y+PTSP YSP+SP YSP+SP S SP YSP++P++SP S
Sbjct: 1788 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSP 1847
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S +Y+P
Sbjct: 1848 TYSPTSPVYTPTS-PKYSP 1865
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1578 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1637
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1638 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1674
Score = 97.4 bits (241), Expect = 4e-19
Identities = 47/78 (60%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
P+ +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP YSP+SP +SP+T
Sbjct: 1782 PNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPK 1841
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S YTP
Sbjct: 1842 YSPTSPTYSPTS-PVYTP 1858
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1844 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP---- 1899
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + +P +D++
Sbjct: 1900 --GYSPTSPTYSLTSPA-ISPDDSDEE 1923
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPS 315
+S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P
Sbjct: 1552 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPR 1604
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 1605 SPGGYTPQSPSYSPTSPS-YSP 1625
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1538 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1594
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P Y P S YTPQ+
Sbjct: 1595 SPTSPAYEPRSPGGYTPQS 1613
[54][TOP]
>UniRef100_UPI00005A0B23 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 14 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B23
Length = 1653
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1488 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1547
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1548 SYSPTSPSYSPTSPS-YSP 1565
Score = 112 bits (279), Expect = 2e-23
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1551 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1610
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS+P Y+P+S S Y+P
Sbjct: 1611 NYSPSRPNYTPTSPS-YSP 1628
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1509 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1568
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1569 SYSPTSPSYSPTSPS-YSP 1586
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1530 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1589
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1590 SYSPTSPSYSPTSPS-YSP 1607
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1537 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1596
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1597 SYSPTSPSYSPTSPN-YSP 1614
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1558 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRP 1617
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1618 NYTPTSPSYSPTSPS-YSP 1635
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1474 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1533
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1534 SYSPTSPSYSPTSPS-YSP 1551
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1466 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1525
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1526 PSYSPTSPSYSPTSPS-YSP 1544
Score = 105 bits (261), Expect = 2e-21
Identities = 50/73 (68%), Positives = 58/73 (79%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1579 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1638
Query: 311 GYSPSQPGYSPSS 273
Y+P P YSP+S
Sbjct: 1639 NYTPMSPNYSPTS 1651
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1495 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1554
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1555 SYSPTSPSYSPTSPSYSPTSPS-YSP 1579
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1516 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1575
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1576 SYSPTSPSYSPTSPSYSPTSPS-YSP 1600
Score = 94.0 bits (232), Expect = 5e-18
Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S P+Y+P+SP
Sbjct: 1565 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1624
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P Y+P S + Y+P
Sbjct: 1625 SYSPTSPSYSPTSPNYTPMSPN-YSP 1649
Score = 90.1 bits (222), Expect = 7e-17
Identities = 48/85 (56%), Positives = 57/85 (67%), Gaps = 16/85 (18%)
Frame = -3
Query: 461 SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 327
SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP
Sbjct: 1454 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1513
Query: 326 FSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1514 YSPTSPSYSPTSPSYSPTSPS-YSP 1537
Score = 84.3 bits (207), Expect = 4e-15
Identities = 37/53 (69%), Positives = 48/53 (90%), Gaps = 1/53 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + +SP+YSP+SP
Sbjct: 1600 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1652
[55][TOP]
>UniRef100_UPI00005A0B22 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 13 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B22
Length = 1722
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1488 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1547
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1548 SYSPTSPSYSPTSPS-YSP 1565
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1509 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1568
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1569 SYSPTSPSYSPTSPS-YSP 1586
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1530 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1589
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1590 SYSPTSPSYSPTSPS-YSP 1607
Score = 111 bits (277), Expect = 3e-23
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1558 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSP 1617
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSP+S + Y+P T
Sbjct: 1618 KYSPTSPKYSPTSPT-YSPTT 1637
Score = 111 bits (277), Expect = 3e-23
Identities = 55/79 (69%), Positives = 67/79 (84%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSPSSP++SP S
Sbjct: 1565 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPKYSPTSP 1624
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP +T +Y+P
Sbjct: 1625 KYSPTSPTYSP-TTPKYSP 1642
Score = 110 bits (276), Expect = 4e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1551 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1610
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS P YSP+S +Y+P
Sbjct: 1611 NYSPSSPKYSPTS-PKYSP 1628
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1474 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1533
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1534 SYSPTSPSYSPTSPS-YSP 1551
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1466 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1525
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1526 PSYSPTSPSYSPTSPS-YSP 1544
Score = 106 bits (264), Expect = 9e-22
Identities = 53/81 (65%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1614 PSSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1673
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1674 KYSPTSPTYSPTSPKGSTYSP 1694
Score = 105 bits (262), Expect = 2e-21
Identities = 52/79 (65%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSP+YSPSSP YSP+SP S SP YSP++P++SP S
Sbjct: 1586 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPKYSPTSPKYSPTSPTYSPTTPKYSPTSP 1645
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S +Y+P
Sbjct: 1646 TYSPTSPVYTPTS-PKYSP 1663
Score = 101 bits (252), Expect = 2e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1628 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1687
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 1688 KGSTYSPTSPGYSPTS 1703
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1495 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1554
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1555 SYSPTSPSYSPTSPSYSPTSPS-YSP 1579
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1516 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1575
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1576 SYSPTSPSYSPTSPSYSPTSPS-YSP 1600
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1537 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1596
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSPSS +Y+P
Sbjct: 1597 SYSPTSPSYSPTSPNYSPSS-PKYSP 1621
Score = 100 bits (249), Expect = 5e-20
Identities = 49/79 (62%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP YSPTSP YSPTSP+YSP++P YSP+SP S SP Y+P+SP++SP S
Sbjct: 1607 PTSPNYSPSSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSP 1666
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1667 TYSPTSPKYSPTSPT-YSP 1684
Score = 99.4 bits (246), Expect = 1e-19
Identities = 56/86 (65%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP YSPSSP S SP YSP+SP
Sbjct: 1572 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPKYSPTSPKYSPTSP 1631
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
+SP+T YSP+ P YSP+S YTP
Sbjct: 1632 TYSPTTPKYSPTSPTYSPTS-PVYTP 1656
Score = 90.1 bits (222), Expect = 7e-17
Identities = 48/85 (56%), Positives = 57/85 (67%), Gaps = 16/85 (18%)
Frame = -3
Query: 461 SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 327
SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP
Sbjct: 1454 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1513
Query: 326 FSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1514 YSPTSPSYSPTSPSYSPTSPS-YSP 1537
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1642 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP---- 1697
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + +P +D++
Sbjct: 1698 --GYSPTSPTYSLTSPA-ISPDDSDEE 1721
[56][TOP]
>UniRef100_UPI00005A0B21 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 12 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B21
Length = 1922
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1623 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1682
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1683 SYSPTSPSYSPTSPS-YSP 1700
Score = 112 bits (279), Expect = 2e-23
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1686 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1745
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS+P Y+P+S S Y+P
Sbjct: 1746 NYSPSRPNYTPTSPS-YSP 1763
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1644 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1703
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1704 SYSPTSPSYSPTSPS-YSP 1721
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1665 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1724
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1725 SYSPTSPSYSPTSPS-YSP 1742
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1672 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1731
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1732 SYSPTSPSYSPTSPN-YSP 1749
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1693 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRP 1752
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1753 NYTPTSPSYSPTSPS-YSP 1770
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1668
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1669 SYSPTSPSYSPTSPS-YSP 1686
Score = 109 bits (273), Expect = 8e-23
Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1714 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1773
Query: 311 GYSPSQPGYSPSSTS-QYTP 255
Y+P P YSP+ TS +YTP
Sbjct: 1774 NYTPMSPNYSPTPTSPKYTP 1793
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1601 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1660
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1661 PSYSPTSPSYSPTSPS-YSP 1679
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1814 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1873
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1874 KYSPTSPTYSPTSPKGSTYSP 1894
Score = 103 bits (257), Expect = 6e-21
Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 318
P+SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP YSP+SP ++P
Sbjct: 1721 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSP 1780
Query: 317 -------STGYSPSQPGYSPSSTSQYTP 255
S Y+P+ P YSPSS +YTP
Sbjct: 1781 NYSPTPTSPKYTPTSPSYSPSS-PEYTP 1807
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1800 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1859
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1860 KYSPTSPTYSPTS-PKYSP 1877
Score = 101 bits (252), Expect = 2e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1828 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1887
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 1888 KGSTYSPTSPGYSPTS 1903
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1630 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1689
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1690 SYSPTSPSYSPTSPSYSPTSPS-YSP 1714
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1651 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1710
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1711 SYSPTSPSYSPTSPSYSPTSPS-YSP 1735
Score = 98.6 bits (244), Expect = 2e-19
Identities = 47/79 (59%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP Y+PTSP+YSP+SP Y+PTSP YSP+SP YSP+SP S SP YSP++P++SP S
Sbjct: 1786 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSP 1845
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S +Y+P
Sbjct: 1846 TYSPTSPVYTPTS-PKYSP 1863
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1576 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1635
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1636 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1672
Score = 97.4 bits (241), Expect = 4e-19
Identities = 47/78 (60%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
P+ +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP YSP+SP +SP+T
Sbjct: 1780 PNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPK 1839
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S YTP
Sbjct: 1840 YSPTSPTYSPTS-PVYTP 1856
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1842 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP---- 1897
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + +P +D++
Sbjct: 1898 --GYSPTSPTYSLTSPA-ISPDDSDEE 1921
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPS 315
+S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P
Sbjct: 1550 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPR 1602
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 1603 SPGGYTPQSPSYSPTSPS-YSP 1623
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1536 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1592
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P Y P S YTPQ+
Sbjct: 1593 SPTSPAYEPRSPGGYTPQS 1611
[57][TOP]
>UniRef100_UPI00005A0B20 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 11 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B20
Length = 1923
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1684 SYSPTSPSYSPTSPS-YSP 1701
Score = 112 bits (279), Expect = 2e-23
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1746
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS+P Y+P+S S Y+P
Sbjct: 1747 NYSPSRPNYTPTSPS-YSP 1764
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1704
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1705 SYSPTSPSYSPTSPS-YSP 1722
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1725
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1726 SYSPTSPSYSPTSPS-YSP 1743
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1732
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1733 SYSPTSPSYSPTSPN-YSP 1750
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1694 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRP 1753
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1754 NYTPTSPSYSPTSPS-YSP 1771
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1669
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1670 SYSPTSPSYSPTSPS-YSP 1687
Score = 109 bits (273), Expect = 8e-23
Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1715 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1774
Query: 311 GYSPSQPGYSPSSTS-QYTP 255
Y+P P YSP+ TS +YTP
Sbjct: 1775 NYTPMSPNYSPTPTSPKYTP 1794
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1815 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1874
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1875 KYSPTSPTYSPTSPKGSTYSP 1895
Score = 103 bits (257), Expect = 6e-21
Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 318
P+SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP YSP+SP ++P
Sbjct: 1722 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSP 1781
Query: 317 -------STGYSPSQPGYSPSSTSQYTP 255
S Y+P+ P YSPSS +YTP
Sbjct: 1782 NYSPTPTSPKYTPTSPSYSPSS-PEYTP 1808
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1801 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1860
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1861 KYSPTSPTYSPTS-PKYSP 1878
Score = 101 bits (252), Expect = 2e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1829 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1888
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 1889 KGSTYSPTSPGYSPTS 1904
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1691 SYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1712 SYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 98.6 bits (244), Expect = 2e-19
Identities = 47/79 (59%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP Y+PTSP+YSP+SP Y+PTSP YSP+SP YSP+SP S SP YSP++P++SP S
Sbjct: 1787 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSP 1846
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S +Y+P
Sbjct: 1847 TYSPTSPVYTPTS-PKYSP 1864
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 97.4 bits (241), Expect = 4e-19
Identities = 47/78 (60%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
P+ +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP YSP+SP +SP+T
Sbjct: 1781 PNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPK 1840
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S YTP
Sbjct: 1841 YSPTSPTYSPTS-PVYTP 1857
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1843 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP---- 1898
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + +P +D++
Sbjct: 1899 --GYSPTSPTYSLTSPA-ISPDDSDEE 1922
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPS 315
+S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P
Sbjct: 1551 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPR 1603
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 1604 SPGGYTPQSPSYSPTSPS-YSP 1624
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1537 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1593
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P Y P S YTPQ+
Sbjct: 1594 SPTSPAYEPRSPGGYTPQS 1612
[58][TOP]
>UniRef100_UPI00005A0B1F PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 10 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1F
Length = 1840
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1557 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1616
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1617 SYSPTSPSYSPTSPS-YSP 1634
Score = 112 bits (279), Expect = 2e-23
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1620 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1679
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS+P Y+P+S S Y+P
Sbjct: 1680 NYSPSRPNYTPTSPS-YSP 1697
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1578 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1637
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1638 SYSPTSPSYSPTSPS-YSP 1655
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1599 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1658
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1659 SYSPTSPSYSPTSPS-YSP 1676
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1606 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1665
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1666 SYSPTSPSYSPTSPN-YSP 1683
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1627 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRP 1686
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1687 NYTPTSPSYSPTSPS-YSP 1704
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1543 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1602
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1603 SYSPTSPSYSPTSPS-YSP 1620
Score = 109 bits (272), Expect = 1e-22
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1648 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1707
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSPSS +YTP
Sbjct: 1708 KYTPTSPSYSPSS-PEYTP 1725
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1535 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1594
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1595 PSYSPTSPSYSPTSPS-YSP 1613
Score = 105 bits (261), Expect = 2e-21
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1690 PTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1749
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1750 TYSPTTPKYSPTSPT-YSP 1767
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1732 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1791
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1792 KYSPTSPTYSPTSPKGSTYSP 1812
Score = 104 bits (260), Expect = 3e-21
Identities = 50/79 (63%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1669 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSP 1728
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1729 KYSPTSPKYSPTS-PKYSP 1746
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1718 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1777
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1778 KYSPTSPTYSPTS-PKYSP 1795
Score = 101 bits (252), Expect = 2e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1746 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1805
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 1806 KGSTYSPTSPGYSPTS 1821
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1564 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1623
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1624 SYSPTSPSYSPTSPSYSPTSPS-YSP 1648
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1585 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1644
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1645 SYSPTSPSYSPTSPSYSPTSPS-YSP 1669
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1711 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP 1770
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S + Y+P
Sbjct: 1771 VYTPTSPKYSPTSPT-YSP 1788
Score = 95.5 bits (236), Expect = 2e-18
Identities = 52/86 (60%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSP+ PNY+PTSPSYSPTSPSYSP+SP +YSPSSP + SP YSP+SP
Sbjct: 1676 PTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSP 1735
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
++SP S YSP+ P YSP +T +Y+P
Sbjct: 1736 KYSPTSPKYSPTSPTYSP-TTPKYSP 1760
Score = 94.7 bits (234), Expect = 3e-18
Identities = 51/86 (59%), Positives = 66/86 (76%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSP+YS P+SP+YSP+SP S SP Y+P+SP
Sbjct: 1655 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSP 1714
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
+SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1715 SYSPSSPEYTPTSPKYSPTS-PKYSP 1739
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1760 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP---- 1815
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + +P +D++
Sbjct: 1816 --GYSPTSPTYSLTSPA-ISPDDSDEE 1839
Score = 77.4 bits (189), Expect = 5e-13
Identities = 45/93 (48%), Positives = 55/93 (59%), Gaps = 16/93 (17%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSP---------------SYSPSSPTYSPSSPYNSGVSP 351
P SP P+SP YSPTSP SYSP+SP+YSP+SP S SP
Sbjct: 1509 PGSP-GPSSPYIPSPGELYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSP 1567
Query: 350 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1568 NYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1599
Score = 65.9 bits (159), Expect = 1e-09
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN-SGVSPDYSPSSPQFSP-STGY 306
+P SP SP P+SP YSP+SP Y P SP + SP YSP+SP +SP S Y
Sbjct: 1505 TPGSPGSPG--PSSPYIPSPGELYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSY 1562
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1563 SPTSPNYSPTSPS-YSP 1578
Score = 53.9 bits (128), Expect = 5e-06
Identities = 34/71 (47%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = -3
Query: 461 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST--GYSPSQPG 288
SP YSP ++SPT S P SP PSSPY YSP+SP + P + GY+P P
Sbjct: 1495 SPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGELYSPTSPAYEPRSPGGYTPQSPS 1547
Query: 287 YSPSSTSQYTP 255
YSP+S S Y+P
Sbjct: 1548 YSPTSPS-YSP 1557
[59][TOP]
>UniRef100_UPI00005A0B1E PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 9 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1E
Length = 1851
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1561 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1620
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1621 SYSPTSPSYSPTSPS-YSP 1638
Score = 112 bits (279), Expect = 2e-23
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1624 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS+P Y+P+S S Y+P
Sbjct: 1684 NYSPSRPNYTPTSPS-YSP 1701
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1582 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1641
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1642 SYSPTSPSYSPTSPS-YSP 1659
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1603 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1662
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1663 SYSPTSPSYSPTSPS-YSP 1680
Score = 110 bits (276), Expect = 4e-23
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1631 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRP 1690
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
Y+P+ P YSP+S S Y+P +
Sbjct: 1691 NYTPTSPSYSPTSPS-YSPSS 1710
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1610 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1669
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1670 SYSPTSPSYSPTSPN-YSP 1687
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1547 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1606
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1607 SYSPTSPSYSPTSPS-YSP 1624
Score = 109 bits (272), Expect = 1e-22
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP YSPSSP +SP S
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPSSPSYSPTSP 1718
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSPSS +YTP
Sbjct: 1719 KYTPTSPSYSPSS-PEYTP 1736
Score = 107 bits (266), Expect = 5e-22
Identities = 52/79 (65%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+ PNY+PTSPSYSPTSPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1680 PTSPNYSPSRPNYTPTSPSYSPTSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSP 1739
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1740 KYSPTSPKYSPTS-PKYSP 1757
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1539 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1598
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1599 PSYSPTSPSYSPTSPS-YSP 1617
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1743 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1802
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1803 KYSPTSPTYSPTSPKGSTYSP 1823
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1701 PTSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1760
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1761 TYSPTTPKYSPTSPT-YSP 1778
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1729 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1788
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1789 KYSPTSPTYSPTS-PKYSP 1806
Score = 101 bits (252), Expect = 2e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1757 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1816
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 1817 KGSTYSPTSPGYSPTS 1832
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1568 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1627
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1628 SYSPTSPSYSPTSPSYSPTSPS-YSP 1652
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1589 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1648
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1649 SYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 100 bits (249), Expect = 5e-20
Identities = 53/85 (62%), Positives = 65/85 (76%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSPS P ++P S
Sbjct: 1638 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1697
Query: 311 GYSPSQP---GYSPS---STSQYTP 255
YSP+ P SPS ++ +YTP
Sbjct: 1698 SYSPTSPSYSPSSPSYSPTSPKYTP 1722
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1722 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP 1781
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S + Y+P
Sbjct: 1782 VYTPTSPKYSPTSPT-YSP 1799
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1514 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1573
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1574 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1610
Score = 93.6 bits (231), Expect = 6e-18
Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYS-------PTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
PS P Y+PTSP+YSPTSPSYS PTSP Y+P+SP+YSPSSP + SP YSP+SP
Sbjct: 1687 PSRPNYTPTSPSYSPTSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSP 1746
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
++SP S YSP+ P YSP +T +Y+P
Sbjct: 1747 KYSPTSPKYSPTSPTYSP-TTPKYSP 1771
Score = 92.4 bits (228), Expect = 1e-17
Identities = 51/83 (61%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFS 321
PSSP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP SP SP YSP+SP +S
Sbjct: 1708 PSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYS 1763
Query: 320 PST-GYSPSQPGYSPSSTSQYTP 255
P+T YSP+ P YSP+S YTP
Sbjct: 1764 PTTPKYSPTSPTYSPTS-PVYTP 1785
Score = 91.3 bits (225), Expect = 3e-17
Identities = 53/100 (53%), Positives = 65/100 (65%), Gaps = 23/100 (23%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP---------------------SSP 372
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP SSP
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPSSP 1711
Query: 371 YNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 255
S SP Y+P+SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1712 SYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS-PKYSP 1750
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1771 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP---- 1826
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + +P +D++
Sbjct: 1827 --GYSPTSPTYSLTSPA-ISPDDSDEE 1850
Score = 57.8 bits (138), Expect = 4e-07
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 16/85 (18%)
Frame = -3
Query: 461 SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPY--------NSGVSPDYSPSSPQ 327
SP +SPT S PS Y PS SP+YSP+SP + SP YSP+SP
Sbjct: 1499 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1558
Query: 326 FSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1559 YSPTSPSYSPTSPNYSPTSPS-YSP 1582
Score = 57.0 bits (136), Expect = 6e-07
Identities = 36/75 (48%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = -3
Query: 461 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPST--GYSP 300
SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P + GY+P
Sbjct: 1495 SPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTP 1547
Query: 299 SQPGYSPSSTSQYTP 255
P YSP+S S Y+P
Sbjct: 1548 QSPSYSPTSPS-YSP 1561
[60][TOP]
>UniRef100_UPI00005A0B1D PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 1 n=2 Tax=Canis lupus familiaris
RepID=UPI00005A0B1D
Length = 1764
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1599 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1658
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1659 SYSPTSPSYSPTSPS-YSP 1676
Score = 112 bits (279), Expect = 2e-23
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1662 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1721
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS+P Y+P+S S Y+P
Sbjct: 1722 NYSPSRPNYTPTSPS-YSP 1739
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1620 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1679
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1680 SYSPTSPSYSPTSPS-YSP 1697
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1641 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1700
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1701 SYSPTSPSYSPTSPS-YSP 1718
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1648 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1707
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1708 SYSPTSPSYSPTSPN-YSP 1725
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1669 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRP 1728
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1729 NYTPTSPSYSPTSPS-YSP 1746
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1585 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1644
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1645 SYSPTSPSYSPTSPS-YSP 1662
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1577 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1636
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1637 PSYSPTSPSYSPTSPS-YSP 1655
Score = 105 bits (261), Expect = 2e-21
Identities = 50/73 (68%), Positives = 58/73 (79%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1690 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1749
Query: 311 GYSPSQPGYSPSS 273
Y+P P YSP+S
Sbjct: 1750 NYTPMSPNYSPTS 1762
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1606 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1665
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1666 SYSPTSPSYSPTSPSYSPTSPS-YSP 1690
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1627 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1686
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1687 SYSPTSPSYSPTSPSYSPTSPS-YSP 1711
Score = 94.0 bits (232), Expect = 5e-18
Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S P+Y+P+SP
Sbjct: 1676 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1735
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P Y+P S + Y+P
Sbjct: 1736 SYSPTSPSYSPTSPNYTPMSPN-YSP 1760
Score = 84.3 bits (207), Expect = 4e-15
Identities = 37/53 (69%), Positives = 48/53 (90%), Gaps = 1/53 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + +SP+YSP+SP
Sbjct: 1711 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1763
Score = 77.4 bits (189), Expect = 5e-13
Identities = 45/90 (50%), Positives = 55/90 (61%), Gaps = 17/90 (18%)
Frame = -3
Query: 473 YSPTSPNYSPT-SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGVSPDYS 342
Y SP+ SPSYSPT SPSYSP+SP+YSP+SP S SP+YS
Sbjct: 1553 YGAWSPSVGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYS 1612
Query: 341 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
P+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1613 PTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1641
[61][TOP]
>UniRef100_UPI00005A0B1C PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 8 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1C
Length = 1719
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1554 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1613
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1614 SYSPTSPSYSPTSPS-YSP 1631
Score = 112 bits (279), Expect = 2e-23
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1617 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1676
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS+P Y+P+S S Y+P
Sbjct: 1677 NYSPSRPNYTPTSPS-YSP 1694
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1575 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1634
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1635 SYSPTSPSYSPTSPS-YSP 1652
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1596 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1655
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1656 SYSPTSPSYSPTSPS-YSP 1673
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1603 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1662
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1663 SYSPTSPSYSPTSPN-YSP 1680
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1624 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRP 1683
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1684 NYTPTSPSYSPTSPS-YSP 1701
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1540 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1599
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1600 SYSPTSPSYSPTSPS-YSP 1617
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1532 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1591
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1592 PSYSPTSPSYSPTSPS-YSP 1610
Score = 105 bits (261), Expect = 2e-21
Identities = 50/73 (68%), Positives = 58/73 (79%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1704
Query: 311 GYSPSQPGYSPSS 273
Y+P P YSP+S
Sbjct: 1705 NYTPMSPNYSPTS 1717
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1561 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1620
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1621 SYSPTSPSYSPTSPSYSPTSPS-YSP 1645
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1582 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1641
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1642 SYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1507 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1566
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1567 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1603
Score = 94.0 bits (232), Expect = 5e-18
Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S P+Y+P+SP
Sbjct: 1631 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1690
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P Y+P S + Y+P
Sbjct: 1691 SYSPTSPSYSPTSPNYTPMSPN-YSP 1715
Score = 84.3 bits (207), Expect = 4e-15
Identities = 37/53 (69%), Positives = 48/53 (90%), Gaps = 1/53 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + +SP+YSP+SP
Sbjct: 1666 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1718
Score = 58.9 bits (141), Expect = 2e-07
Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 17/93 (18%)
Frame = -3
Query: 482 SSPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPY--------NSGVSP 351
+S +SP SP +SPT S PS Y PS SP+YSP+SP + SP
Sbjct: 1484 ASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSP 1543
Query: 350 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1544 SYSPTSPSYSPTSPSYSPTSPNYSPTSPS-YSP 1575
Score = 58.2 bits (139), Expect = 3e-07
Identities = 39/80 (48%), Positives = 49/80 (61%), Gaps = 9/80 (11%)
Frame = -3
Query: 467 PTS-PNYSPTSPSYSPT-SPSY-SPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPST- 312
PT+ P+ S SP YSP SP+ SP SP PSSPY +SP YSP+SP + P +
Sbjct: 1478 PTNIPDASGFSPGYSPAWSPTPGSPGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSP 1535
Query: 311 -GYSPSQPGYSPSSTSQYTP 255
GY+P P YSP+S S Y+P
Sbjct: 1536 GGYTPQSPSYSPTSPS-YSP 1554
[62][TOP]
>UniRef100_UPI00005A0B1B PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 7 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1B
Length = 1858
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1554 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1613
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1614 SYSPTSPSYSPTSPS-YSP 1631
Score = 112 bits (279), Expect = 2e-23
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1617 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1676
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS+P Y+P+S S Y+P
Sbjct: 1677 NYSPSRPNYTPTSPS-YSP 1694
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1575 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1634
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1635 SYSPTSPSYSPTSPS-YSP 1652
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1596 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1655
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1656 SYSPTSPSYSPTSPS-YSP 1673
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1603 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1662
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1663 SYSPTSPSYSPTSPN-YSP 1680
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1624 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRP 1683
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1684 NYTPTSPSYSPTSPS-YSP 1701
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1540 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1599
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1600 SYSPTSPSYSPTSPS-YSP 1617
Score = 107 bits (267), Expect = 4e-22
Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1704
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P P YSP+S S Y+P
Sbjct: 1705 NYTPMSPNYSPTSPS-YSP 1722
Score = 107 bits (267), Expect = 4e-22
Identities = 51/79 (64%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + +SP+YSP+SP +SP S
Sbjct: 1666 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPSYSPTSP 1725
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSPSS +YTP
Sbjct: 1726 KYTPTSPSYSPSS-PEYTP 1743
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1532 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1591
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1592 PSYSPTSPSYSPTSPS-YSP 1610
Score = 105 bits (261), Expect = 2e-21
Identities = 51/81 (62%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNY+P SP+YSPTSPSYSP+SP Y+P+SP S SP+Y+P+SP++SP S
Sbjct: 1694 PTSPSYSPTSPNYTPMSPNYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSP 1753
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSP+S + Y+P T
Sbjct: 1754 KYSPTSPKYSPTSPT-YSPTT 1773
Score = 105 bits (261), Expect = 2e-21
Identities = 51/79 (64%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP Y+P SPNYSPTSPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1701 PTSPNYTPMSPNYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1760
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP +T +Y+P
Sbjct: 1761 KYSPTSPTYSP-TTPKYSP 1778
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1750 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1809
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1810 KYSPTSPTYSPTSPKGSTYSP 1830
Score = 104 bits (259), Expect = 3e-21
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1708 PMSPNYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1767
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1768 TYSPTTPKYSPTSPT-YSP 1785
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1736 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1795
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1796 KYSPTSPTYSPTS-PKYSP 1813
Score = 102 bits (255), Expect = 1e-20
Identities = 49/79 (62%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP+Y+P SP+YSP+SP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1687 PTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSP 1746
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1747 KYSPTSPKYSPTS-PKYSP 1764
Score = 101 bits (252), Expect = 2e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1764 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1823
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 1824 KGSTYSPTSPGYSPTS 1839
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1561 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1620
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1621 SYSPTSPSYSPTSPSYSPTSPS-YSP 1645
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1582 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1641
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1642 SYSPTSPSYSPTSPSYSPTSPS-YSP 1666
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1729 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP 1788
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S + Y+P
Sbjct: 1789 VYTPTSPKYSPTSPT-YSP 1806
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1507 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1566
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1567 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1603
Score = 94.0 bits (232), Expect = 5e-18
Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S P+Y+P+SP
Sbjct: 1631 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1690
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P Y+P S + Y+P
Sbjct: 1691 SYSPTSPSYSPTSPNYTPMSPN-YSP 1715
Score = 91.3 bits (225), Expect = 3e-17
Identities = 50/83 (60%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFS 321
P+SP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP SP SP YSP+SP +S
Sbjct: 1715 PTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYS 1770
Query: 320 PST-GYSPSQPGYSPSSTSQYTP 255
P+T YSP+ P YSP+S YTP
Sbjct: 1771 PTTPKYSPTSPTYSPTS-PVYTP 1792
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1778 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP---- 1833
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + +P +D++
Sbjct: 1834 --GYSPTSPTYSLTSPA-ISPDDSDEE 1857
Score = 58.9 bits (141), Expect = 2e-07
Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 17/93 (18%)
Frame = -3
Query: 482 SSPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPY--------NSGVSP 351
+S +SP SP +SPT S PS Y PS SP+YSP+SP + SP
Sbjct: 1484 ASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSP 1543
Query: 350 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1544 SYSPTSPSYSPTSPSYSPTSPNYSPTSPS-YSP 1575
Score = 58.2 bits (139), Expect = 3e-07
Identities = 39/80 (48%), Positives = 49/80 (61%), Gaps = 9/80 (11%)
Frame = -3
Query: 467 PTS-PNYSPTSPSYSPT-SPSY-SPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPST- 312
PT+ P+ S SP YSP SP+ SP SP PSSPY +SP YSP+SP + P +
Sbjct: 1478 PTNIPDASGFSPGYSPAWSPTPGSPGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSP 1535
Query: 311 -GYSPSQPGYSPSSTSQYTP 255
GY+P P YSP+S S Y+P
Sbjct: 1536 GGYTPQSPSYSPTSPS-YSP 1554
[63][TOP]
>UniRef100_UPI00005A0B1A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 6 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1A
Length = 1767
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1661
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1662 SYSPTSPSYSPTSPS-YSP 1679
Score = 112 bits (279), Expect = 2e-23
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1665 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1724
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS+P Y+P+S S Y+P
Sbjct: 1725 NYSPSRPNYTPTSPS-YSP 1742
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1623 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1682
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1683 SYSPTSPSYSPTSPS-YSP 1700
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1644 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1703
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1704 SYSPTSPSYSPTSPS-YSP 1721
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1651 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1710
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1711 SYSPTSPSYSPTSPN-YSP 1728
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1672 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRP 1731
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1732 NYTPTSPSYSPTSPS-YSP 1749
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1588 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1647
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1648 SYSPTSPSYSPTSPS-YSP 1665
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1580 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1639
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1640 PSYSPTSPSYSPTSPS-YSP 1658
Score = 105 bits (261), Expect = 2e-21
Identities = 50/73 (68%), Positives = 58/73 (79%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1693 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1752
Query: 311 GYSPSQPGYSPSS 273
Y+P P YSP+S
Sbjct: 1753 NYTPMSPNYSPTS 1765
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1668
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1669 SYSPTSPSYSPTSPSYSPTSPS-YSP 1693
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1630 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1689
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1690 SYSPTSPSYSPTSPSYSPTSPS-YSP 1714
Score = 94.0 bits (232), Expect = 5e-18
Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S P+Y+P+SP
Sbjct: 1679 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1738
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P Y+P S + Y+P
Sbjct: 1739 SYSPTSPSYSPTSPNYTPMSPN-YSP 1763
Score = 84.3 bits (207), Expect = 4e-15
Identities = 37/53 (69%), Positives = 48/53 (90%), Gaps = 1/53 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + +SP+YSP+SP
Sbjct: 1714 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1766
Score = 72.4 bits (176), Expect = 1e-11
Identities = 42/79 (53%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN-SGVSPDYSPSSPQFSP-ST 312
PSSPY P SP S SPSYSP+SP Y P SP + SP YSP+SP +SP S
Sbjct: 1551 PSSPYIP-----SPGELSCGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSP 1605
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1606 SYSPTSPNYSPTSPS-YSP 1623
Score = 55.1 bits (131), Expect = 2e-06
Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFS--- 321
P S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS + S
Sbjct: 1509 PRSGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPSPGELSCGA 1566
Query: 320 PSTGYSPSQPGYSPSSTSQYTPQT 249
S YSP+ P Y P S YTPQ+
Sbjct: 1567 MSPSYSPTSPAYEPRSPGGYTPQS 1590
[64][TOP]
>UniRef100_UPI00005A0B19 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 5 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B19
Length = 1693
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1528 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1587
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1588 SYSPTSPSYSPTSPS-YSP 1605
Score = 112 bits (279), Expect = 2e-23
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1591 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1650
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS+P Y+P+S S Y+P
Sbjct: 1651 NYSPSRPNYTPTSPS-YSP 1668
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1549 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1608
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1609 SYSPTSPSYSPTSPS-YSP 1626
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1570 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1629
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1630 SYSPTSPSYSPTSPS-YSP 1647
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1577 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1636
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1637 SYSPTSPSYSPTSPN-YSP 1654
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1598 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRP 1657
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1658 NYTPTSPSYSPTSPS-YSP 1675
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1514 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1573
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1574 SYSPTSPSYSPTSPS-YSP 1591
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1506 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1565
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1566 PSYSPTSPSYSPTSPS-YSP 1584
Score = 105 bits (261), Expect = 2e-21
Identities = 50/73 (68%), Positives = 58/73 (79%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1619 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1678
Query: 311 GYSPSQPGYSPSS 273
Y+P P YSP+S
Sbjct: 1679 NYTPMSPNYSPTS 1691
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1535 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1594
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1595 SYSPTSPSYSPTSPSYSPTSPS-YSP 1619
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1556 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1615
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1616 SYSPTSPSYSPTSPSYSPTSPS-YSP 1640
Score = 94.0 bits (232), Expect = 5e-18
Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S P+Y+P+SP
Sbjct: 1605 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1664
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P Y+P S + Y+P
Sbjct: 1665 SYSPTSPSYSPTSPNYTPMSPN-YSP 1689
Score = 90.9 bits (224), Expect = 4e-17
Identities = 49/93 (52%), Positives = 59/93 (63%), Gaps = 16/93 (17%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYNSGVSP 351
P + SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP S SP
Sbjct: 1486 PGAAGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1545
Query: 350 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1546 SYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1577
Score = 84.3 bits (207), Expect = 4e-15
Identities = 37/53 (69%), Positives = 48/53 (90%), Gaps = 1/53 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + +SP+YSP+SP
Sbjct: 1640 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1692
[65][TOP]
>UniRef100_UPI00005A0B17 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 3 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B17
Length = 1788
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1623 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1682
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1683 SYSPTSPSYSPTSPS-YSP 1700
Score = 112 bits (279), Expect = 2e-23
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1686 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1745
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS+P Y+P+S S Y+P
Sbjct: 1746 NYSPSRPNYTPTSPS-YSP 1763
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1644 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1703
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1704 SYSPTSPSYSPTSPS-YSP 1721
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1665 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1724
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1725 SYSPTSPSYSPTSPS-YSP 1742
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1672 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1731
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1732 SYSPTSPSYSPTSPN-YSP 1749
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1693 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRP 1752
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1753 NYTPTSPSYSPTSPS-YSP 1770
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1668
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1669 SYSPTSPSYSPTSPS-YSP 1686
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1601 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1660
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1661 PSYSPTSPSYSPTSPS-YSP 1679
Score = 105 bits (261), Expect = 2e-21
Identities = 50/73 (68%), Positives = 58/73 (79%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1714 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1773
Query: 311 GYSPSQPGYSPSS 273
Y+P P YSP+S
Sbjct: 1774 NYTPMSPNYSPTS 1786
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1630 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1689
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1690 SYSPTSPSYSPTSPSYSPTSPS-YSP 1714
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1651 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1710
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1711 SYSPTSPSYSPTSPSYSPTSPS-YSP 1735
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1576 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1635
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1636 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1672
Score = 94.0 bits (232), Expect = 5e-18
Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S P+Y+P+SP
Sbjct: 1700 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1759
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P Y+P S + Y+P
Sbjct: 1760 SYSPTSPSYSPTSPNYTPMSPN-YSP 1784
Score = 84.3 bits (207), Expect = 4e-15
Identities = 37/53 (69%), Positives = 48/53 (90%), Gaps = 1/53 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + +SP+YSP+SP
Sbjct: 1735 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1787
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPS 315
+S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P
Sbjct: 1550 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPR 1602
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 1603 SPGGYTPQSPSYSPTSPS-YSP 1623
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1536 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1592
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P Y P S YTPQ+
Sbjct: 1593 SPTSPAYEPRSPGGYTPQS 1611
[66][TOP]
>UniRef100_UPI00005A0B16 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 2 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B16
Length = 1922
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1623 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1682
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1683 SYSPTSPSYSPTSPS-YSP 1700
Score = 112 bits (279), Expect = 2e-23
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1686 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1745
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS+P Y+P+S S Y+P
Sbjct: 1746 NYSPSRPNYTPTSPS-YSP 1763
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1644 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1703
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1704 SYSPTSPSYSPTSPS-YSP 1721
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1665 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1724
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1725 SYSPTSPSYSPTSPS-YSP 1742
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1672 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1731
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1732 SYSPTSPSYSPTSPN-YSP 1749
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1693 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRP 1752
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1753 NYTPTSPSYSPTSPS-YSP 1770
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1668
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1669 SYSPTSPSYSPTSPS-YSP 1686
Score = 109 bits (273), Expect = 8e-23
Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1714 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1773
Query: 311 GYSPSQPGYSPSSTS-QYTP 255
Y+P P YSP+ TS +YTP
Sbjct: 1774 NYTPMSPNYSPTPTSPKYTP 1793
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1601 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1660
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1661 PSYSPTSPSYSPTSPS-YSP 1679
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1814 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1873
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1874 KYSPTSPTYSPTSPKGSTYSP 1894
Score = 103 bits (257), Expect = 6e-21
Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 318
P+SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP YSP+SP ++P
Sbjct: 1721 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSP 1780
Query: 317 -------STGYSPSQPGYSPSSTSQYTP 255
S Y+P+ P YSPSS +YTP
Sbjct: 1781 NYSPTPTSPKYTPTSPSYSPSS-PEYTP 1807
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1800 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1859
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1860 KYSPTSPTYSPTS-PKYSP 1877
Score = 101 bits (252), Expect = 2e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1828 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1887
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 1888 KGSTYSPTSPGYSPTS 1903
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1630 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1689
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1690 SYSPTSPSYSPTSPSYSPTSPS-YSP 1714
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1651 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1710
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1711 SYSPTSPSYSPTSPSYSPTSPS-YSP 1735
Score = 98.6 bits (244), Expect = 2e-19
Identities = 47/79 (59%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP Y+PTSP+YSP+SP Y+PTSP YSP+SP YSP+SP S SP YSP++P++SP S
Sbjct: 1786 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSP 1845
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S +Y+P
Sbjct: 1846 TYSPTSPVYTPTS-PKYSP 1863
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1576 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1635
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1636 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1672
Score = 97.4 bits (241), Expect = 4e-19
Identities = 47/78 (60%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
P+ +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP YSP+SP +SP+T
Sbjct: 1780 PNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPK 1839
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S YTP
Sbjct: 1840 YSPTSPTYSPTS-PVYTP 1856
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1842 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP---- 1897
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + +P +D++
Sbjct: 1898 --GYSPTSPTYSLTSPA-ISPDDSDEE 1921
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPS 315
+S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P
Sbjct: 1550 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPR 1602
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 1603 SPGGYTPQSPSYSPTSPS-YSP 1623
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1536 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1592
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P Y P S YTPQ+
Sbjct: 1593 SPTSPAYEPRSPGGYTPQS 1611
[67][TOP]
>UniRef100_UPI0000546D90 PREDICTED: im:7136071 isoform 1 n=1 Tax=Danio rerio
RepID=UPI0000546D90
Length = 1972
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1628 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1687
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1688 SYSPTSPSYSPTSPS-YSP 1705
Score = 112 bits (280), Expect = 1e-23
Identities = 54/81 (66%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP+Y+PTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1740 PTSPSYSPTSPSYSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSP 1799
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSPSS +YTPQ+
Sbjct: 1800 SYSPTSPSYSPSS-PRYTPQS 1819
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1649 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1708
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1709 SYSPTSPSYSPTSPS-YSP 1726
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1670 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1729
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1730 SYSPTSPSYSPTSPS-YSP 1747
Score = 111 bits (277), Expect = 3e-23
Identities = 54/79 (68%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1712 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPSYSPTSP 1771
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + YTP
Sbjct: 1772 SYSPTSPSYSPTSPN-YTP 1789
Score = 111 bits (277), Expect = 3e-23
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNY+PTSPSYSPTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1747 PTSPSYSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1806
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSPS P Y+P S + YTP +
Sbjct: 1807 SYSPSSPRYTPQSPT-YTPSS 1826
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1621 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1680
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1681 SYSPTSPSYSPTSPS-YSP 1698
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1691 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1750
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S S Y+P
Sbjct: 1751 SYSPTSPNYTPTSPS-YSP 1768
Score = 110 bits (275), Expect = 5e-23
Identities = 55/79 (69%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP Y+PTSPNYSPTSPSYSPTSPSYSPSSP Y+P SP + SP YSPSSP +SP S
Sbjct: 1782 PTSPNYTPTSPNYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSP 1841
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSPSS +YTP
Sbjct: 1842 KYTPTSPSYSPSS-PEYTP 1859
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1614 PQSPGYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1673
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1674 SYSPTSPSYSPTSPS-YSP 1691
Score = 107 bits (267), Expect = 4e-22
Identities = 54/86 (62%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP Y+PTSP+YSPTSPSYSPTSPSYSP+SP Y+P+SP S SP YSP+SP +SPS+
Sbjct: 1754 PTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPSSP 1813
Query: 311 -------GYSPSQPGYSPSSTSQYTP 255
Y+PS P YSPSS S Y+P
Sbjct: 1814 RYTPQSPTYTPSSPSYSPSSPS-YSP 1838
Score = 106 bits (265), Expect = 7e-22
Identities = 51/78 (65%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
P Y+P SP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1608 PGGGYTPQSPGYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1667
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1668 YSPTSPSYSPTSPS-YSP 1684
Score = 105 bits (262), Expect = 2e-21
Identities = 52/95 (54%), Positives = 68/95 (71%), Gaps = 12/95 (12%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPTSP YSPT+P YSPTSP+YSP+SPTY+P+SP S SP YSP+SP++SP+
Sbjct: 1873 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSPTSP 1932
Query: 314 ---------TGYSPSQPGYSPSSTSQYTPQTNDQD 237
+ YSP+ PGYSP+S + Y+P + D
Sbjct: 1933 TYSPTSPKGSTYSPTSPGYSPTSPT-YSPAISPDD 1966
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1824 PSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1883
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1884 TYSPTTPKYSPTSPT-YSP 1901
Score = 104 bits (260), Expect = 3e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1866 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSP 1925
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1926 KYSPTSPTYSPTSPKGSTYSP 1946
Score = 103 bits (258), Expect = 5e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1852 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSP 1911
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1912 KYSPTSPTYSPTS-PKYSP 1929
Score = 102 bits (253), Expect = 2e-20
Identities = 49/79 (62%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1817 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1876
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP +T +Y+P
Sbjct: 1877 KYSPTSPTYSP-TTPKYSP 1894
Score = 101 bits (252), Expect = 2e-20
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1677 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1736
Query: 311 GYSPSQP---GYSPS---STSQYTP 255
YSP+ P SPS ++ YTP
Sbjct: 1737 SYSPTSPSYSPTSPSYSPTSPNYTP 1761
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1635 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1694
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1695 SYSPTSPSYSPTSPSYSPTSPS-YSP 1719
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1656 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1715
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1716 SYSPTSPSYSPTSPSYSPTSPS-YSP 1740
Score = 100 bits (249), Expect = 5e-20
Identities = 48/79 (60%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1803 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSP 1862
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1863 KYSPTSPKYSPTS-PKYSP 1880
Score = 99.4 bits (246), Expect = 1e-19
Identities = 54/86 (62%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP+
Sbjct: 1698 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1757
Query: 314 --TGYSPSQP----GYSPSSTSQYTP 255
T SPS YSP+S S Y+P
Sbjct: 1758 NYTPTSPSYSPTSPSYSPTSPS-YSP 1782
Score = 99.0 bits (245), Expect = 1e-19
Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1845 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP 1904
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S + Y+P
Sbjct: 1905 TYTPTSPKYSPTSPT-YSP 1922
Score = 94.4 bits (233), Expect = 4e-18
Identities = 53/105 (50%), Positives = 64/105 (60%), Gaps = 28/105 (26%)
Frame = -3
Query: 485 PSSPYSPT-----------SPNYSPTSPS----------------YSPTSPSYSPSSPTY 387
P+SPY P+ SPNYSPTSP+ YSPTSPSYSP+SP+Y
Sbjct: 1574 PASPYIPSPGYITLHFGALSPNYSPTSPAYEPRSPGGGYTPQSPGYSPTSPSYSPTSPSY 1633
Query: 386 SPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
SP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1634 SPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1677
Score = 93.6 bits (231), Expect = 6e-18
Identities = 51/83 (61%), Positives = 61/83 (73%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFS 321
PSSP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP SP SP YSP+SP +S
Sbjct: 1831 PSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYS 1886
Query: 320 PST-GYSPSQPGYSPSSTSQYTP 255
P+T YSP+ P YSP+S + YTP
Sbjct: 1887 PTTPKYSPTSPTYSPTSPT-YTP 1908
[68][TOP]
>UniRef100_UPI0001951285 220 kDa DNA-directed RNA polymerase polypeptide A n=1 Tax=Canis lupus
familiaris RepID=UPI0001951285
Length = 1969
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1684 SYSPTSPSYSPTSPS-YSP 1701
Score = 112 bits (279), Expect = 2e-23
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1746
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS+P Y+P+S S Y+P
Sbjct: 1747 NYSPSRPNYTPTSPS-YSP 1764
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1704
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1705 SYSPTSPSYSPTSPS-YSP 1722
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1725
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1726 SYSPTSPSYSPTSPS-YSP 1743
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1732
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1733 SYSPTSPSYSPTSPN-YSP 1750
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1694 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRP 1753
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1754 NYTPTSPSYSPTSPS-YSP 1771
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1669
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1670 SYSPTSPSYSPTSPS-YSP 1687
Score = 108 bits (271), Expect = 1e-22
Identities = 51/80 (63%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + +SP+YSP+SP S
Sbjct: 1736 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPNSPTSPS 1795
Query: 308 YSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSPSS +YTPQ+
Sbjct: 1796 YSPTSPSYSPSS-PRYTPQS 1814
Score = 106 bits (265), Expect = 7e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 105 bits (263), Expect = 1e-21
Identities = 51/78 (65%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1715 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1774
Query: 311 GYSPSQPGYSPSSTSQYT 258
Y+P P YSP+S + T
Sbjct: 1775 NYTPMSPNYSPTSPNSPT 1792
Score = 105 bits (263), Expect = 1e-21
Identities = 50/78 (64%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
P+SP SPTSP+YSPTSPSYSP+SP Y+P SPTY+PSSP S SP YSP+SP+++P S
Sbjct: 1785 PTSPNSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPS 1844
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSPS P Y+P+S +Y+P
Sbjct: 1845 YSPSSPEYTPTS-PKYSP 1861
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1861 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1920
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1921 KYSPTSPTYSPTSPKGSTYSP 1941
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1819 PSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1878
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1879 TYSPTTPKYSPTSPT-YSP 1896
Score = 103 bits (258), Expect = 5e-21
Identities = 54/86 (62%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
PS P Y+PTSP+YSPTSPSYSPTSP+Y+P SP YSP+SP NS SP YSP+SP +SPS+
Sbjct: 1750 PSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP-NSPTSPSYSPTSPSYSPSSP 1808
Query: 311 -------GYSPSQPGYSPSSTSQYTP 255
Y+PS P YSPSS S Y+P
Sbjct: 1809 RYTPQSPTYTPSSPSYSPSSPS-YSP 1833
Score = 103 bits (257), Expect = 6e-21
Identities = 55/79 (69%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSPN SPTSPSYSPTSPSYSPSSP Y+P SP + SP YSPSSP +SP S
Sbjct: 1778 PMSPNYSPTSPN-SPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSP 1836
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSPSS +YTP
Sbjct: 1837 KYTPTSPSYSPSS-PEYTP 1854
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1847 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1906
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1907 KYSPTSPTYSPTS-PKYSP 1924
Score = 102 bits (253), Expect = 2e-20
Identities = 49/79 (62%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1812 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1871
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP +T +Y+P
Sbjct: 1872 KYSPTSPTYSP-TTPKYSP 1889
Score = 101 bits (252), Expect = 2e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1875 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1934
Query: 314 --TGYSPSQPGYSPSS 273
+ YSP+ PGYSP+S
Sbjct: 1935 KGSTYSPTSPGYSPTS 1950
Score = 100 bits (250), Expect = 4e-20
Identities = 49/81 (60%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+P SP Y+P+SPSYSP+SPSYSP+SP Y+P+SP S SP+Y+P+SP++SP S
Sbjct: 1805 PSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSP 1864
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSP+S + Y+P T
Sbjct: 1865 KYSPTSPKYSPTSPT-YSPTT 1884
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1691 SYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1712 SYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1840 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP 1899
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S + Y+P
Sbjct: 1900 VYTPTSPKYSPTSPT-YSP 1917
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 366
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 94.0 bits (232), Expect = 5e-18
Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S P+Y+P+SP
Sbjct: 1701 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1760
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P Y+P S + Y+P
Sbjct: 1761 SYSPTSPSYSPTSPNYTPMSPN-YSP 1785
Score = 92.4 bits (228), Expect = 1e-17
Identities = 51/83 (61%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFS 321
PSSP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP SP SP YSP+SP +S
Sbjct: 1826 PSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYS 1881
Query: 320 PST-GYSPSQPGYSPSSTSQYTP 255
P+T YSP+ P YSP+S YTP
Sbjct: 1882 PTTPKYSPTSPTYSPTS-PVYTP 1903
Score = 90.9 bits (224), Expect = 4e-17
Identities = 50/85 (58%), Positives = 63/85 (74%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP---TY---SPSSPYNSGVSPDYSPSSPQ 327
P+SP YSPTSP+YSPTSP+Y+P SP+YSP+SP T SP+SP S SP Y+P SP
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPNSPTSPSYSPTSPSYSPSSPRYTPQSPT 1816
Query: 326 FSPST-GYSPSQPGYSPSSTSQYTP 255
++PS+ YSPS P YSP+S +YTP
Sbjct: 1817 YTPSSPSYSPSSPSYSPTS-PKYTP 1840
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1889 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP---- 1944
Query: 317 STGYSPSQPGYSPSSTSQYTPQTNDQD 237
GYSP+ P YS +S + +P +D++
Sbjct: 1945 --GYSPTSPTYSLTSPA-ISPDDSDEE 1968
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPS 315
+S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P
Sbjct: 1551 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPR 1603
Query: 314 T--GYSPSQPGYSPSSTSQYTP 255
+ GY+P P YSP+S S Y+P
Sbjct: 1604 SPGGYTPQSPSYSPTSPS-YSP 1624
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1537 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1593
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P Y P S YTPQ+
Sbjct: 1594 SPTSPAYEPRSPGGYTPQS 1612
[69][TOP]
>UniRef100_Q9BMP3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis
RepID=Q9BMP3_MONBE
Length = 1743
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSPNYSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1622 PSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSP 1681
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1682 SYSPTSPNYSPTSPS-YSP 1699
Score = 109 bits (273), Expect = 8e-23
Identities = 56/94 (59%), Positives = 66/94 (70%), Gaps = 17/94 (18%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 318
P+SP YSPTSPNYSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP
Sbjct: 1650 PTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSP 1709
Query: 317 -------------STGYSPSQPGYSPSSTSQYTP 255
S GYSP+ PGYSP+S Y+P
Sbjct: 1710 SYSPTANGTSGPTSPGYSPTSPGYSPTSPG-YSP 1742
Score = 108 bits (270), Expect = 2e-22
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSP+SPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1608 PTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSP 1667
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1668 SYSPTSPNYSPTSPS-YSP 1685
Score = 107 bits (268), Expect = 3e-22
Identities = 52/79 (65%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP+YSPTSP+YSPTSPSYSP+SP YSP+SP S SP+YSP+SP +SP S
Sbjct: 1615 PTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSP 1674
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1675 NYSPTSPSYSPTSPN-YSP 1692
Score = 107 bits (268), Expect = 3e-22
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP YSP+SP S SP+YSP+SP +SP S
Sbjct: 1643 PTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSP 1702
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP++ P
Sbjct: 1703 NYSPTSPSYSPTANGTSGP 1721
Score = 106 bits (265), Expect = 7e-22
Identities = 53/87 (60%), Positives = 62/87 (71%), Gaps = 17/87 (19%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 318
P+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP YSP+SP S SP+YSP+SP +SP
Sbjct: 1657 PTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTAN 1716
Query: 317 -------------STGYSPSQPGYSPS 276
S GYSP+ PGYSPS
Sbjct: 1717 GTSGPTSPGYSPTSPGYSPTSPGYSPS 1743
Score = 103 bits (256), Expect = 8e-21
Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSPY--SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P+SP SPTSP YSPTSP YSP+SPSYSP+SP YSP+SP S SP+YSP+SP +SP S
Sbjct: 1600 PTSPNVKSPTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTS 1659
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1660 PNYSPTSPSYSPTSPN-YSP 1678
Score = 95.5 bits (236), Expect = 2e-18
Identities = 47/78 (60%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPST-G 309
S YSPTSP+YSP+SP+Y+ SP+YSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1567 SPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPS 1626
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1627 YSPTSPNYSPTSPS-YSP 1643
Score = 91.7 bits (226), Expect = 2e-17
Identities = 59/125 (47%), Positives = 67/125 (53%), Gaps = 48/125 (38%)
Frame = -3
Query: 485 PSSP--YSPTSP-----------------------------NYSPTSPSYSPT------- 420
PSSP YSPTSP +YSPTSPSYSPT
Sbjct: 1506 PSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGA 1565
Query: 419 -SPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP---------STGYSPSQPGYSPSST 270
SPSYSP+SP+YSPSSP + SP YSP+SP +SP S GYSP+ PGYSPSS
Sbjct: 1566 QSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSP 1625
Query: 269 SQYTP 255
S Y+P
Sbjct: 1626 S-YSP 1629
Score = 70.1 bits (170), Expect = 7e-11
Identities = 38/72 (52%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSPYNSGVSPDYSPSSPQ-FSP-STG 309
SP SP SP Y P+SP+ YSP+SP+YSP+SP S SP +SP+SP F+P S
Sbjct: 1488 SPGGAMSPGVVSASPFYDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPH 1547
Query: 308 YSPSQPGYSPSS 273
YSP+ P YSP+S
Sbjct: 1548 YSPTSPSYSPTS 1559
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/81 (43%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSP--SYSP---TSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP- 318
SP SP SP + SP SP +SP Y PSSP YSP+SP +SP
Sbjct: 1469 SPGGMLSPGGIAQSPGGAMSPGGAMSPGVVSASPFYDPSSPAG------YSPTSPSYSPT 1522
Query: 317 STGYSPSQPGYSPSSTSQYTP 255
S G SP+ PG+SP+S + +TP
Sbjct: 1523 SPGMSPTSPGFSPASPAGFTP 1543
[70][TOP]
>UniRef100_B7PJA3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixodes scapularis
RepID=B7PJA3_IXOSC
Length = 1937
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1623 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1682
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1683 SYSPTSPSYSPTSPS-YSP 1700
Score = 113 bits (283), Expect = 6e-24
Identities = 58/87 (66%), Positives = 67/87 (77%), Gaps = 8/87 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSPSSP S SP YSP SP +SPS+
Sbjct: 1728 PASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPSYSPSSP 1787
Query: 311 GYSPSQPGYSPSSTS------QYTPQT 249
YSP+ P YSP+S S QYTP +
Sbjct: 1788 KYSPTSPSYSPTSPSYSPGSPQYTPSS 1814
Score = 112 bits (279), Expect = 2e-23
Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1644 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1703
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSP+S S Y+P +
Sbjct: 1704 SYSPTSPSYSPTSPS-YSPSS 1723
Score = 112 bits (279), Expect = 2e-23
Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSPSSP + SP YSP+SP +SP S
Sbjct: 1686 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPTSP 1745
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSP+S S Y+P +
Sbjct: 1746 SYSPTSPSYSPTSPS-YSPSS 1765
Score = 111 bits (277), Expect = 3e-23
Identities = 54/79 (68%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1665 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP 1724
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1725 NYTPASPSYSPTSPS-YSP 1742
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 PASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1668
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1669 SYSPTSPSYSPTSPS-YSP 1686
Score = 109 bits (273), Expect = 8e-23
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SPNY+P SPSYSPTSPSYSP+SP+YSP+SP S SP YSPSSP +SP S
Sbjct: 1714 PTSPSYSPSSPNYTPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYSPQSP 1773
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP P YSPSS +Y+P
Sbjct: 1774 SYSPGSPSYSPSS-PKYSP 1791
Score = 108 bits (270), Expect = 2e-22
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 5/82 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
PSSP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1854 PSSPKYSPTSPQYSPTSPQYSPTSPKYSPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 1913
Query: 314 --TGYSPSQPGYSPSSTSQYTP 255
+ YSP+ PGYSPSS + Y+P
Sbjct: 1914 KGSSYSPTSPGYSPSSPT-YSP 1934
Score = 107 bits (268), Expect = 3e-22
Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P SP YSP+SP YSPTSPSYSPTSPSYSP SP Y+PSSP S SP YSP+SP +SPS+
Sbjct: 1777 PGSPSYSPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSPTSPSYSPSSP 1836
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSP+S + YTP +
Sbjct: 1837 KYSPTSPKYSPTSPT-YTPSS 1856
Score = 107 bits (268), Expect = 3e-22
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSP+SP YSPTSP YSP+SPTY+PSSP S SP YSP+SPQ+SP S
Sbjct: 1819 PTSPTYSPTSPSYSPSSPKYSPTSPKYSPTSPTYTPSSPKYSPTSPQYSPTSPQYSPTSP 1878
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1879 KYSPTSPKYSPTSPT-YSP 1896
Score = 106 bits (264), Expect = 9e-22
Identities = 51/81 (62%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSP+SP+Y+P SPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1707 PTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP 1766
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP P YSP S S Y+P +
Sbjct: 1767 NYSPQSPSYSPGSPS-YSPSS 1786
Score = 105 bits (263), Expect = 1e-21
Identities = 53/79 (67%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP +P SP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP 1661
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1662 SYSPTSPSYSPTSPS-YSP 1679
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP Y+P+SP YSPTSP+YSPTSPSYSPSSP YSP+SP S SP Y+PSSP++SP S
Sbjct: 1805 PGSPQYTPSSPKYSPTSPTYSPTSPSYSPSSPKYSPTSPKYSPTSPTYTPSSPKYSPTSP 1864
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1865 QYSPTSPQYSPTS-PKYSP 1882
Score = 103 bits (256), Expect = 8e-21
Identities = 50/80 (62%), Positives = 63/80 (78%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSPY--SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P+SPY SP SPNYSP+SP+Y+P+SPS +P+SPTYSP+SP S SP YSP+SP +SP S
Sbjct: 1580 PASPYIPSPVSPNYSPSSPAYAPSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPNYSPTS 1639
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1640 PSYSPTSPSYSPTSPS-YSP 1658
Score = 103 bits (256), Expect = 8e-21
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP SP+YSP SPSYSP+SP YSP+SP+YSP+SP S SP Y+PSSP++SP S
Sbjct: 1763 PSSPNYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTSP 1822
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSPSS +Y+P
Sbjct: 1823 TYSPTSPSYSPSS-PKYSP 1840
Score = 102 bits (255), Expect = 1e-20
Identities = 50/79 (63%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+P+SP+ +P SP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1595 PSSPAYAPSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1654
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1655 SYSPTSPSYSPTSPS-YSP 1672
Score = 102 bits (253), Expect = 2e-20
Identities = 51/79 (64%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSP SP+YSP+SP YSPTSPSYSP+SP+YSP SP + SP YSP+SP +SP S
Sbjct: 1770 PQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSPTSP 1829
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS P YSP+S +Y+P
Sbjct: 1830 SYSPSSPKYSPTS-PKYSP 1847
Score = 102 bits (253), Expect = 2e-20
Identities = 51/81 (62%), Positives = 61/81 (75%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP Y+P+SP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1840 PTSPKYSPTSPTYTPSSPKYSPTSPQYSPTSPQYSPTSPKYSPTSPKYSPTSPTYSPTSP 1899
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1900 KYSPTSPTYSPTSPKGSSYSP 1920
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1630 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1689
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1690 SYSPTSPSYSPTSPSYSPTSPS-YSP 1714
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1651 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1710
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSPS P Y+P+S S Y+P
Sbjct: 1711 SYSPTSPSYSPSSPNYTPASPS-YSP 1735
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSPSSP ++P S
Sbjct: 1672 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASP 1731
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1732 SYSPTSPSYSPTSPSYSPTSPS-YSP 1756
Score = 97.4 bits (241), Expect = 4e-19
Identities = 53/86 (61%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYS-------PTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYS P+SP+Y+P+SP+YSP+SP S SP YSP+SP
Sbjct: 1693 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPTSPSYSPTSP 1752
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSPS P YSP S S Y+P
Sbjct: 1753 SYSPTSPSYSPSSPNYSPQSPS-YSP 1777
Score = 95.9 bits (237), Expect = 1e-18
Identities = 56/102 (54%), Positives = 66/102 (64%), Gaps = 23/102 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP---------------------SSP 372
P+SP YSPTSP+YSPTSPSYSPTSPSYSPSSP YSP +SP
Sbjct: 1735 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPSYSPSSPKYSPTSP 1794
Query: 371 YNSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 249
S SP YSP SPQ++PS+ YSP+ P YSP+S S Y+P +
Sbjct: 1795 SYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSPTSPS-YSPSS 1835
Score = 94.4 bits (233), Expect = 4e-18
Identities = 49/75 (65%), Positives = 55/75 (73%), Gaps = 4/75 (5%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFSP 318
P+SP YSPTSP YSPTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1868 PTSPQYSPTSPKYSPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSSYSPTSP---- 1923
Query: 317 STGYSPSQPGYSPSS 273
GYSPS P YSP+S
Sbjct: 1924 --GYSPSSPTYSPTS 1936
Score = 92.4 bits (228), Expect = 1e-17
Identities = 53/93 (56%), Positives = 64/93 (68%), Gaps = 16/93 (17%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------PSSPTYSPSSPYNSGVSP 351
PSSP YSPTSP+YSPTSPSYSP SP Y+ P+SP+YSPSSP S SP
Sbjct: 1784 PSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSPTSPSYSPSSPKYSPTSP 1843
Query: 350 DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 255
YSP+SP ++PS+ YSP+ P YSP+S QY+P
Sbjct: 1844 KYSPTSPTYTPSSPKYSPTSPQYSPTS-PQYSP 1875
Score = 91.7 bits (226), Expect = 2e-17
Identities = 50/86 (58%), Positives = 63/86 (73%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSP+SP YSPTSP YSPTSP+Y+ P+SP YSP+SP S SP YSP+SP
Sbjct: 1826 PTSPSYSPSSPKYSPTSPKYSPTSPTYTPSSPKYSPTSPQYSPTSPQYSPTSPKYSPTSP 1885
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
++SP S YSP+ P YSP+S + Y+P
Sbjct: 1886 KYSPTSPTYSPTSPKYSPTSPT-YSP 1910
Score = 78.6 bits (192), Expect = 2e-13
Identities = 39/56 (69%), Positives = 45/56 (80%), Gaps = 4/56 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP---TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP YSPTSP+YSP+SP +YSP+SP S SP YSP+SP
Sbjct: 1882 PTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSSYSPTSPGYSPSSPTYSPTSP 1937
Score = 72.0 bits (175), Expect = 2e-11
Identities = 43/94 (45%), Positives = 53/94 (56%), Gaps = 18/94 (19%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYS-----------------PTSPSYSPSSPTYSPSSPYNSGVS 354
+S YSP S SP +S P SP+YSPSSP Y+PSSP + S
Sbjct: 1555 ASGYSPASAGLSP---GWSPQPGSPASSPASPYIPSPVSPNYSPSSPAYAPSSPSMTPAS 1611
Query: 353 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
P YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1612 PTYSPTSPSYSPTSPSYSPTSPNYSPTSPS-YSP 1644
Score = 62.4 bits (150), Expect = 2e-08
Identities = 41/94 (43%), Positives = 54/94 (57%), Gaps = 19/94 (20%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS----YSPTSPSYSPS------SPTYSPSSPY-NSGVSPDYSPSS 333
S +P + +SP++ S YSP S SP SP SP+SPY S VSP+YSPSS
Sbjct: 1538 SGMTPGAAGFSPSAASDASGYSPASAGLSPGWSPQPGSPASSPASPYIPSPVSPNYSPSS 1597
Query: 332 PQFSPST--------GYSPSQPGYSPSSTSQYTP 255
P ++PS+ YSP+ P YSP+S S Y+P
Sbjct: 1598 PAYAPSSPSMTPASPTYSPTSPSYSPTSPS-YSP 1630
[71][TOP]
>UniRef100_A9V5W6 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis
RepID=A9V5W6_MONBE
Length = 1307
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSPNYSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1186 PSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSP 1245
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1246 SYSPTSPNYSPTSPS-YSP 1263
Score = 109 bits (273), Expect = 8e-23
Identities = 56/94 (59%), Positives = 66/94 (70%), Gaps = 17/94 (18%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 318
P+SP YSPTSPNYSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP
Sbjct: 1214 PTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSP 1273
Query: 317 -------------STGYSPSQPGYSPSSTSQYTP 255
S GYSP+ PGYSP+S Y+P
Sbjct: 1274 SYSPTANGTSGPTSPGYSPTSPGYSPTSPG-YSP 1306
Score = 108 bits (270), Expect = 2e-22
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSP+SPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1172 PTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSP 1231
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1232 SYSPTSPNYSPTSPS-YSP 1249
Score = 107 bits (268), Expect = 3e-22
Identities = 52/79 (65%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP+YSPTSP+YSPTSPSYSP+SP YSP+SP S SP+YSP+SP +SP S
Sbjct: 1179 PTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSP 1238
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1239 NYSPTSPSYSPTSPN-YSP 1256
Score = 107 bits (268), Expect = 3e-22
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP YSP+SP S SP+YSP+SP +SP S
Sbjct: 1207 PTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSP 1266
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP++ P
Sbjct: 1267 NYSPTSPSYSPTANGTSGP 1285
Score = 106 bits (265), Expect = 7e-22
Identities = 53/87 (60%), Positives = 62/87 (71%), Gaps = 17/87 (19%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 318
P+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP YSP+SP S SP+YSP+SP +SP
Sbjct: 1221 PTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTAN 1280
Query: 317 -------------STGYSPSQPGYSPS 276
S GYSP+ PGYSPS
Sbjct: 1281 GTSGPTSPGYSPTSPGYSPTSPGYSPS 1307
Score = 103 bits (256), Expect = 8e-21
Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSPY--SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P+SP SPTSP YSPTSP YSP+SPSYSP+SP YSP+SP S SP+YSP+SP +SP S
Sbjct: 1164 PTSPNVKSPTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTS 1223
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1224 PNYSPTSPSYSPTSPN-YSP 1242
Score = 95.5 bits (236), Expect = 2e-18
Identities = 47/78 (60%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPST-G 309
S YSPTSP+YSP+SP+Y+ SP+YSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1131 SPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPS 1190
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1191 YSPTSPNYSPTSPS-YSP 1207
Score = 91.7 bits (226), Expect = 2e-17
Identities = 59/125 (47%), Positives = 67/125 (53%), Gaps = 48/125 (38%)
Frame = -3
Query: 485 PSSP--YSPTSP-----------------------------NYSPTSPSYSPT------- 420
PSSP YSPTSP +YSPTSPSYSPT
Sbjct: 1070 PSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGA 1129
Query: 419 -SPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP---------STGYSPSQPGYSPSST 270
SPSYSP+SP+YSPSSP + SP YSP+SP +SP S GYSP+ PGYSPSS
Sbjct: 1130 QSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSP 1189
Query: 269 SQYTP 255
S Y+P
Sbjct: 1190 S-YSP 1193
Score = 70.1 bits (170), Expect = 7e-11
Identities = 38/72 (52%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSPYNSGVSPDYSPSSPQ-FSP-STG 309
SP SP SP Y P+SP+ YSP+SP+YSP+SP S SP +SP+SP F+P S
Sbjct: 1052 SPGGAMSPGVVSASPFYDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPH 1111
Query: 308 YSPSQPGYSPSS 273
YSP+ P YSP+S
Sbjct: 1112 YSPTSPSYSPTS 1123
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/81 (43%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSP--SYSP---TSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP- 318
SP SP SP + SP SP +SP Y PSSP YSP+SP +SP
Sbjct: 1033 SPGGMLSPGGIAQSPGGAMSPGGAMSPGVVSASPFYDPSSPAG------YSPTSPSYSPT 1086
Query: 317 STGYSPSQPGYSPSSTSQYTP 255
S G SP+ PG+SP+S + +TP
Sbjct: 1087 SPGMSPTSPGFSPASPAGFTP 1107
[72][TOP]
>UniRef100_A8PU11 DNA-directed RNA polymerase n=1 Tax=Brugia malayi RepID=A8PU11_BRUMA
Length = 1943
Score = 113 bits (283), Expect = 6e-24
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1692 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSP 1751
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ PGYSPSS +Y+P
Sbjct: 1752 SYSPASPGYSPSS-PRYSP 1769
Score = 113 bits (282), Expect = 7e-24
Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP YSPTSP+YSPTSP+YSP+SPTYSP+SP S SP YSPSSP++SP S
Sbjct: 1762 PSSPRYSPTSPAYSPTSPTYSPTSPAYSPTSPTYSPTSPSYSPASPGYSPSSPRYSPTSP 1821
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSPSS QY+P +
Sbjct: 1822 TYSPTSPAYSPSS-PQYSPSS 1841
Score = 112 bits (280), Expect = 1e-23
Identities = 58/81 (71%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP YSPTSP+YSPTSPSYSP+SP YSPSSP S SP YSP+SP +SPS+
Sbjct: 1776 PTSPTYSPTSPAYSPTSPTYSPTSPSYSPASPGYSPSSPRYSPTSPTYSPTSPAYSPSSP 1835
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSPS P YSPSS QYTP +
Sbjct: 1836 QYSPSSPQYSPSS-PQYTPSS 1855
Score = 109 bits (272), Expect = 1e-22
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSPSSP++SP S
Sbjct: 1713 PTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPASPGYSPSSPRYSPTSP 1772
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1773 AYSPTSPTYSPTSPA-YSP 1790
Score = 107 bits (267), Expect = 4e-22
Identities = 55/86 (63%), Positives = 63/86 (73%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 318
P+SP YSPTSP+YSPTSPSYSP SP YSPSSP YSP+SP S SP YSP+SP +SP
Sbjct: 1734 PTSPSYSPTSPSYSPTSPSYSPASPGYSPSSPRYSPTSPAYSPTSPTYSPTSPAYSPTSP 1793
Query: 317 -----STGYSPSQPGYSPSSTSQYTP 255
S YSP+ PGYSPSS +Y+P
Sbjct: 1794 TYSPTSPSYSPASPGYSPSS-PRYSP 1818
Score = 105 bits (262), Expect = 2e-21
Identities = 52/80 (65%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSP+SP YSPTSP+YSPTSP+YSPSSP YSPSSP S SP Y+PSSP S
Sbjct: 1804 PASPGYSPSSPRYSPTSPTYSPTSPAYSPSSPQYSPSSPQYSPSSPQYTPSSPAGDASPA 1863
Query: 308 YSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSPSS +Y+P +
Sbjct: 1864 YSPTSPQYSPSS-PRYSPSS 1882
Score = 105 bits (261), Expect = 2e-21
Identities = 57/90 (63%), Positives = 64/90 (71%), Gaps = 13/90 (14%)
Frame = -3
Query: 485 PSSP-------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVS-----PDYS 342
PSSP YSPTSP YSP+SP YSP+SP YSP+SP YSPSSP +G S P YS
Sbjct: 1853 PSSPAGDASPAYSPTSPQYSPSSPRYSPSSPQYSPTSPQYSPSSPGGAGTSYSRSSPQYS 1912
Query: 341 PSSPQFSPST-GYSPSQPGYSPSSTSQYTP 255
PSSPQ+SPS+ YSPS P YSPSS QY+P
Sbjct: 1913 PSSPQYSPSSPQYSPSSPQYSPSS-PQYSP 1941
Score = 102 bits (253), Expect = 2e-20
Identities = 52/85 (61%), Positives = 62/85 (72%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSPYSPTSP-------NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 327
P+SPY +SP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP
Sbjct: 1672 PASPYGASSPAYGVMSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPG 1731
Query: 326 FSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1732 YSPTSPSYSPTSPSYSPTSPS-YSP 1755
Score = 100 bits (248), Expect = 7e-20
Identities = 55/83 (66%), Positives = 63/83 (75%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFS 321
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP SP SP YSP+SP +S
Sbjct: 1699 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSP----TSPSYSPTSPSYS 1754
Query: 320 P-STGYSPSQPGYSPSSTSQYTP 255
P S GYSPS P YSP+S + Y+P
Sbjct: 1755 PASPGYSPSSPRYSPTSPA-YSP 1776
Score = 98.2 bits (243), Expect = 2e-19
Identities = 56/86 (65%), Positives = 63/86 (73%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYS-------PTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSPSYS PTSPSYSP+SP YSPSSP S SP YSP+SP
Sbjct: 1720 PTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPASPGYSPSSPRYSPTSPAYSPTSP 1779
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1780 TYSPTSPAYSPTSPTYSPTSPS-YSP 1804
Score = 97.4 bits (241), Expect = 4e-19
Identities = 57/99 (57%), Positives = 65/99 (65%), Gaps = 20/99 (20%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPS------YSPTSPSYSPSSPTYSPSSPYNSGVSPDYSP---- 339
PSSP YSP+SP Y+P+SP+ YSPTSP YSPSSP YSPSSP S SP YSP
Sbjct: 1839 PSSPQYSPSSPQYTPSSPAGDASPAYSPTSPQYSPSSPRYSPSSPQYSPTSPQYSPSSPG 1898
Query: 338 --------SSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 249
SSPQ+SPS+ YSPS P YSPSS QY+P +
Sbjct: 1899 GAGTSYSRSSPQYSPSSPQYSPSSPQYSPSS-PQYSPSS 1936
Score = 97.1 bits (240), Expect = 6e-19
Identities = 56/100 (56%), Positives = 63/100 (63%), Gaps = 22/100 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------------------- 366
PSSP YSPTSP YSPTSP+YSP+SP YSPSSP YSPSSP
Sbjct: 1811 PSSPRYSPTSPTYSPTSPAYSPSSPQYSPSSPQYSPSSPQYTPSSPAGDASPAYSPTSPQ 1870
Query: 365 -SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQ 252
S SP YSPSSPQ+SP S YSPS PG + +S S+ +PQ
Sbjct: 1871 YSPSSPRYSPSSPQYSPTSPQYSPSSPGGAGTSYSRSSPQ 1910
Score = 73.2 bits (178), Expect = 9e-12
Identities = 41/81 (50%), Positives = 50/81 (61%), Gaps = 8/81 (9%)
Frame = -3
Query: 473 YSPTSPNYSP-----TSPSYSPTSPS--YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP- 318
YSP + +Y +SP YSPTSP+ Y SSP Y SP S SP YSP+SP +SP
Sbjct: 1648 YSPAASDYGSGLEGLSSPGYSPTSPASPYGASSPAYGVMSPRYSPTSPSYSPTSPSYSPT 1707
Query: 317 STGYSPSQPGYSPSSTSQYTP 255
S YSP+ P YSP+S S Y+P
Sbjct: 1708 SPSYSPTSPSYSPTSPS-YSP 1727
[73][TOP]
>UniRef100_Q6FQS9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
RepID=Q6FQS9_CANGA
Length = 1715
Score = 113 bits (283), Expect = 6e-24
Identities = 57/87 (65%), Positives = 70/87 (80%), Gaps = 2/87 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1629 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1688
Query: 311 GYSPSQPGYSPSSTSQYTPQTNDQDER 231
YSP+ P YSP S + Y+P+ D+DE+
Sbjct: 1689 SYSPTSPSYSPGSPT-YSPK--DEDEK 1712
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1545 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1604
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1605 SYSPTSPSYSPTSPS-YSP 1622
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1566 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1625
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1626 SYSPTSPSYSPTSPS-YSP 1643
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1587 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1646
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1647 SYSPTSPSYSPTSPS-YSP 1664
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1608 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1667
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1668 SYSPTSPSYSPTSPS-YSP 1685
Score = 107 bits (267), Expect = 4e-22
Identities = 54/78 (69%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
SSP +SPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1539 SSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1598
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1599 YSPTSPSYSPTSPS-YSP 1615
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1552 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1611
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1612 SYSPTSPSYSPTSPSYSPTSPS-YSP 1636
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1573 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1632
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1633 SYSPTSPSYSPTSPSYSPTSPS-YSP 1657
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1594 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1653
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1654 SYSPTSPSYSPTSPSYSPTSPS-YSP 1678
[74][TOP]
>UniRef100_O96446 DNA-directed RNA polymerase n=1 Tax=Vairimorpha necatrix
RepID=O96446_9MICR
Length = 1605
Score = 113 bits (283), Expect = 6e-24
Identities = 59/93 (63%), Positives = 70/93 (75%), Gaps = 8/93 (8%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1504 PTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1563
Query: 311 GYSPSQPGYSPSSTS------QYTPQTNDQDER 231
YSP+ P YSP+S S Y+P T D DE+
Sbjct: 1564 SYSPTSPSYSPTSPSYSPTSPSYSP-TYDNDEK 1595
Score = 111 bits (277), Expect = 3e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1497 PTSPTYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1556
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1557 SYSPTSPSYSPTSPS-YSP 1574
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SPTYSP+SP S SP YSP+SP +SP S
Sbjct: 1469 PTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYSPTSPSYSPTSP 1528
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1529 SYSPTSPSYSPTSPS-YSP 1546
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1490 PTSPTYSPTSPTYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1549
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1550 SYSPTSPSYSPTSPS-YSP 1567
Score = 108 bits (269), Expect = 2e-22
Identities = 52/77 (67%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
+S YSPTSP YSPTSP+YSPTSP+YSP+SPTYSP+SP S SP YSP+SP +SP S Y
Sbjct: 1464 TSLYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYSPTSPSY 1523
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1524 SPTSPSYSPTSPS-YSP 1539
Score = 99.4 bits (246), Expect = 1e-19
Identities = 54/86 (62%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SPTYSP+SP S SP YSP+SP +SP S
Sbjct: 1476 PTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSP 1535
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1536 SYSPTSPSYSPTSPSYSPTSPS-YSP 1560
Score = 98.2 bits (243), Expect = 2e-19
Identities = 47/74 (63%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 297
Y+P + YSPTSP+YSPTSP+YSP+SPTYSP+SP S SP YSP+SP +SP S YSP+
Sbjct: 1460 YAPKTSLYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYSPT 1519
Query: 296 QPGYSPSSTSQYTP 255
P YSP+S S Y+P
Sbjct: 1520 SPSYSPTSPS-YSP 1532
Score = 85.1 bits (209), Expect = 2e-15
Identities = 43/77 (55%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S Y Y+P + YSPTSP+YSP+SPTYSP+SP S SP YSP+SP +SP S Y
Sbjct: 1450 SPAYLVEGNRYAPKTSLYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTY 1509
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1510 SPTSPSYSPTSPS-YSP 1525
Score = 55.5 bits (132), Expect = 2e-06
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 297
+SP S N S +S ++SP +Y Y+P + S SP YSP+SP +SP S YSP+
Sbjct: 1435 HSPVSENLSISSGNWSP---AYLVEGNRYAPKTSLYSPTSPTYSPTSPTYSPTSPTYSPT 1491
Query: 296 QPGYSPSSTSQYTP 255
P YSP+S + Y+P
Sbjct: 1492 SPTYSPTSPT-YSP 1504
[75][TOP]
>UniRef100_Q6CBQ3 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6CBQ3_YARLI
Length = 1750
Score = 113 bits (282), Expect = 7e-24
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1593 PSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1652
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S +P
Sbjct: 1653 SYSPTSPSYSPTSYSPTSP 1671
Score = 113 bits (282), Expect = 7e-24
Identities = 57/93 (61%), Positives = 71/93 (76%), Gaps = 8/93 (8%)
Frame = -3
Query: 485 PSSP------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQ 327
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSPSSP +N+G S YSP+SP
Sbjct: 1656 PTSPSYSPTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKFNAGASTSYSPTSPS 1715
Query: 326 FSP-STGYSPSQPGYSPSSTSQYTPQTNDQDER 231
+SP S YSP+ P YSP+S S Y+P + D ++
Sbjct: 1716 YSPTSPSYSPTSPSYSPTSPS-YSPGSGDSKDK 1747
Score = 108 bits (270), Expect = 2e-22
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
PSSP YSP+SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP
Sbjct: 1579 PSSPAFAATSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1638
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1639 SYSPTSPSYSPTSPSYSPTSPS-YSP 1663
Score = 102 bits (255), Expect = 1e-20
Identities = 51/84 (60%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSS-----PYNSGVSPDYSPSSPQF 324
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+S P S SP YSP+SP +
Sbjct: 1628 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSYSPTSPSYSPTSPSYSPTSPSY 1687
Query: 323 SP-STGYSPSQPGYSPSSTSQYTP 255
SP S YSPS P ++ +++ Y+P
Sbjct: 1688 SPTSPSYSPSSPKFNAGASTSYSP 1711
Score = 98.2 bits (243), Expect = 2e-19
Identities = 47/77 (61%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S +SP+SP ++ TSPSYSP+SPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1574 SPSFSPSSPAFAATSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1633
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1634 SPTSPSYSPTSPS-YSP 1649
Score = 94.7 bits (234), Expect = 3e-18
Identities = 55/93 (59%), Positives = 66/93 (70%), Gaps = 14/93 (15%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSP-----DY 345
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP Y
Sbjct: 1607 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSY 1666
Query: 344 SPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 249
SP+SP +SP S YSP+ P YSP+S S Y+P +
Sbjct: 1667 SPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPSS 1698
Score = 93.6 bits (231), Expect = 6e-18
Identities = 47/81 (58%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP- 318
PSSP SP++SP+SP+++ TSPSYSPSSP+YSP+SP S SP YSP+SP +SP
Sbjct: 1563 PSSPGMGLGAASPSFSPSSPAFAATSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1622
Query: 317 STGYSPSQPGYSPSSTSQYTP 255
S YSP+ P YSP+S S Y+P
Sbjct: 1623 SPSYSPTSPSYSPTSPS-YSP 1642
Score = 82.0 bits (201), Expect = 2e-14
Identities = 45/87 (51%), Positives = 57/87 (65%), Gaps = 12/87 (13%)
Frame = -3
Query: 479 SPYSPTSP--NYSPTSPSYSPTSPSYSPS---------SPTYSPSSPYNSGVSPDYSPSS 333
S Y+PTSP ++ SP ++ TSPSYSPS SP++SPSSP + SP YSPSS
Sbjct: 1536 SAYTPTSPFSSFGAASPGFAATSPSYSPSSPGMGLGAASPSFSPSSPAFAATSPSYSPSS 1595
Query: 332 PQFSP-STGYSPSQPGYSPSSTSQYTP 255
P +SP S YSP+ P YSP+S S Y+P
Sbjct: 1596 PSYSPTSPSYSPTSPSYSPTSPS-YSP 1621
[76][TOP]
>UniRef100_A5E6J4 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
RepID=A5E6J4_LODEL
Length = 1745
Score = 113 bits (282), Expect = 7e-24
Identities = 58/93 (62%), Positives = 69/93 (74%), Gaps = 8/93 (8%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1633 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSP 1692
Query: 311 GYSPSQPGYSPSSTS------QYTPQTNDQDER 231
YSP+ P YSP+S S QY+P + R
Sbjct: 1693 QYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPR 1725
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1556 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1615
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1616 SYSPTSPSYSPTSPS-YSP 1633
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1577 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1636
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1637 SYSPTSPSYSPTSPS-YSP 1654
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1598 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1657
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1658 SYSPTSPSYSPTSPS-YSP 1675
Score = 111 bits (277), Expect = 3e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1619 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1678
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1679 SYSPTSPQYSPTS-PQYSP 1696
Score = 110 bits (274), Expect = 6e-23
Identities = 53/78 (67%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
P YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1536 PGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1595
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1596 YSPTSPSYSPTSPS-YSP 1612
Score = 108 bits (270), Expect = 2e-22
Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1661 PTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSP 1720
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP P YSP S +Y P++
Sbjct: 1721 QYSPRSPNYSPKS-PEYKPKS 1740
Score = 100 bits (250), Expect = 4e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP +YSP+SP S SP YSP+SP
Sbjct: 1605 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1664
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S QY+P
Sbjct: 1665 SYSPTSPSYSPTSPSYSPTS-PQYSP 1689
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1542 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1601
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1602 SYSPTSPSYSPTSPSYSPTSPS-YSP 1626
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1563 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1622
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1623 SYSPTSPSYSPTSPSYSPTSPS-YSP 1647
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1584 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1643
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1644 SYSPTSPSYSPTSPSYSPTSPS-YSP 1668
Score = 87.8 bits (216), Expect = 3e-16
Identities = 48/80 (60%), Positives = 55/80 (68%), Gaps = 6/80 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS----PSSPTYSPSSPYNSGVSPDYSPSSPQFS 321
P+SP YSPTSP+YSPTSP YSPTSP YS +YSP+SP S SP YSP+SPQ+S
Sbjct: 1668 PTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSP----SYSPTSPSYSPTSPQYSPTSPQYS 1723
Query: 320 P-STGYSPSQPGYSPSSTSQ 264
P S YSP P Y P S S+
Sbjct: 1724 PRSPNYSPKSPEYKPKSPSK 1743
Score = 76.3 bits (186), Expect = 1e-12
Identities = 44/87 (50%), Positives = 55/87 (63%), Gaps = 10/87 (11%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSP---------SYSPSSPTYSPSSPYNSGVSPDYSPSS 333
P+SP + TSP T+P Y TSP YSP+SP+YSP+SP S SP YSP+S
Sbjct: 1507 PTSPGN-TSPFSYGTTPGYGGTSPGYGGTSPGYGYSPTSPSYSPTSPSYSPTSPSYSPTS 1565
Query: 332 PQFSP-STGYSPSQPGYSPSSTSQYTP 255
P +SP S YSP+ P YSP+S S Y+P
Sbjct: 1566 PSYSPTSPSYSPTSPSYSPTSPS-YSP 1591
[77][TOP]
>UniRef100_A3GID7 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
RepID=A3GID7_PICST
Length = 1739
Score = 113 bits (282), Expect = 7e-24
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1636 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSP 1695
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1696 QYSPTSPSYSPTS-PQYSP 1713
Score = 112 bits (279), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1615 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1674
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1675 SYSPTSPSYSPTS-PQYSP 1692
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1573 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1632
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1633 SYSPTSPSYSPTSPS-YSP 1650
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1594 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1653
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1654 SYSPTSPSYSPTSPS-YSP 1671
Score = 110 bits (275), Expect = 5e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1566 PTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1625
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1626 SYSPTSPSYSPTSPS-YSP 1643
Score = 110 bits (275), Expect = 5e-23
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1657 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPQYSPTSP 1716
Query: 311 GYSPSQPGYSPSSTSQYTPQTNDQ 240
YSP P YSP+S P+T D+
Sbjct: 1717 QYSPGSPEYSPNS-----PKTEDK 1735
Score = 109 bits (272), Expect = 1e-22
Identities = 53/77 (68%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1547 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1606
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1607 SPTSPSYSPTSPS-YSP 1622
Score = 104 bits (259), Expect = 3e-21
Identities = 51/77 (66%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S Y TSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1540 SPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1599
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1600 SPTSPSYSPTSPS-YSP 1615
Score = 100 bits (250), Expect = 4e-20
Identities = 56/98 (57%), Positives = 71/98 (72%), Gaps = 10/98 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP +YSP+SP S SP YSP+SP
Sbjct: 1643 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSP 1702
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTPQT-NDQDERGQD 222
+SP S YSP+ P YSP S +Y+P + +D++ +D
Sbjct: 1703 SYSPTSPQYSPTSPQYSPGS-PEYSPNSPKTEDKKNED 1739
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1580 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1639
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1640 SYSPTSPSYSPTSPSYSPTSPS-YSP 1664
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1601 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1660
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1661 SYSPTSPSYSPTSPSYSPTSPS-YSP 1685
Score = 99.4 bits (246), Expect = 1e-19
Identities = 54/86 (62%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1552 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1611
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1612 SYSPTSPSYSPTSPSYSPTSPS-YSP 1636
Score = 85.9 bits (211), Expect = 1e-15
Identities = 51/94 (54%), Positives = 61/94 (64%), Gaps = 17/94 (18%)
Frame = -3
Query: 485 PSSPYSPTSP-NYSP---------------TSPSYSPTSPSYSPSSPTYSPSSPYNSGVS 354
P+SP S TSP +Y TSPSYSPTSPSYSP+SP+YSP+SP S S
Sbjct: 1517 PTSP-SATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1575
Query: 353 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
P YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1576 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1608
Score = 60.8 bits (146), Expect = 4e-08
Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Frame = -3
Query: 464 TSPNYSPTSPSYSPTSP-SYSPSSPTYSPS-SPYNSGVSPDYSPSSPQFSP-STGYSPSQ 294
TS PTSPS TSP SY +SP++ S SP G SP YSP+SP +SP S YSP+
Sbjct: 1511 TSYGGQPTSPS--ATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTS 1568
Query: 293 PGYSPSSTSQYTP 255
P YSP+S + Y+P
Sbjct: 1569 PSYSPTSPA-YSP 1580
[78][TOP]
>UniRef100_A5DCV3 DNA-directed RNA polymerase II subunit RPB1 (Fragments) n=1
Tax=Pichia guilliermondii RepID=RPB1_PICGU
Length = 1579
Score = 113 bits (282), Expect = 7e-24
Identities = 57/95 (60%), Positives = 70/95 (73%), Gaps = 8/95 (8%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1485 PTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSP 1544
Query: 311 GYSPSQPGYSPSS------TSQYTPQTNDQDERGQ 225
YSP+ P YSP+S + Y+P ND ++ Q
Sbjct: 1545 AYSPTSPQYSPNSPQYSPRSPLYSPDQNDDKDKKQ 1579
Score = 112 bits (280), Expect = 1e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1464 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSP 1523
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1524 SYSPTSPSYSPTS-PQYSP 1541
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1401 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1460
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1461 SYSPTSPSYSPTSPS-YSP 1478
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1422 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1481
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1482 SYSPTSPSYSPTSPS-YSP 1499
Score = 110 bits (275), Expect = 5e-23
Identities = 54/79 (68%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP++
Sbjct: 1443 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1502
Query: 308 -YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1503 LYSPTSPSYSPTSPS-YSP 1520
Score = 109 bits (273), Expect = 8e-23
Identities = 53/77 (68%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1382 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1441
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1442 SPTSPSYSPTSPS-YSP 1457
Score = 103 bits (258), Expect = 5e-21
Identities = 51/77 (66%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S Y TSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1375 SPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1434
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1435 SPTSPSYSPTSPS-YSP 1450
Score = 102 bits (254), Expect = 1e-20
Identities = 56/94 (59%), Positives = 65/94 (69%), Gaps = 9/94 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSP 318
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP SP
Sbjct: 1471 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSP 1530
Query: 317 STG-----YSPSQPGYSPSSTSQYTPQTNDQDER 231
S YSP+ P YSP+S QY+P + R
Sbjct: 1531 SYSPTSPQYSPTSPAYSPTS-PQYSPNSPQYSPR 1563
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1387 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1446
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1447 SYSPTSPSYSPTSPSYSPTSPS-YSP 1471
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1408 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1467
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1468 SYSPTSPSYSPTSPSYSPTSPS-YSP 1492
Score = 99.8 bits (247), Expect = 9e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1450 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSP 1509
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1510 SYSPTSPSYSPTSPSYSPTSPS-YSP 1534
Score = 99.0 bits (245), Expect = 1e-19
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1429 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1488
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1489 SYSPTSPSYSPTSPLYSPTSPS-YSP 1513
Score = 96.3 bits (238), Expect = 9e-19
Identities = 47/77 (61%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S Y SP Y TSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1368 SPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1427
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1428 SPTSPSYSPTSPS-YSP 1443
Score = 90.9 bits (224), Expect = 4e-17
Identities = 46/80 (57%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P+SP Y TSP Y SP Y TSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1358 PTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1417
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1418 PSYSPTSPSYSPTSPS-YSP 1436
Score = 85.1 bits (209), Expect = 2e-15
Identities = 46/79 (58%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP SPTSP Y TSP+Y SP Y +SPTYSP+SP S SP YSP+SP +SP S
Sbjct: 1353 PGSP-SPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSP 1411
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1412 SYSPTSPSYSPTSPS-YSP 1429
[79][TOP]
>UniRef100_UPI00003BD271 hypothetical protein DEHA0A14036g n=1 Tax=Debaryomyces hansenii
CBS767 RepID=UPI00003BD271
Length = 1749
Score = 112 bits (281), Expect = 1e-23
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1630 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSP 1689
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1690 QYSPTSPSYSPTSPS-YSP 1707
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1574 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1633
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1634 SYSPTSPSYSPTSPS-YSP 1651
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1595 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1654
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1655 SYSPTSPSYSPTSPS-YSP 1672
Score = 111 bits (277), Expect = 3e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1616 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1675
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1676 SYSPTSPQYSPTS-PQYSP 1693
Score = 110 bits (274), Expect = 6e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1651 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSP 1710
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1711 QYSPTSPQYSPTS-PQYSP 1728
Score = 109 bits (273), Expect = 8e-23
Identities = 53/77 (68%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1555 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1614
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1615 SPTSPSYSPTSPS-YSP 1630
Score = 103 bits (258), Expect = 5e-21
Identities = 51/77 (66%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S Y TSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1548 SPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1607
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1608 SPTSPSYSPTSPS-YSP 1623
Score = 103 bits (258), Expect = 5e-21
Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSP 318
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP SP
Sbjct: 1644 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSP 1703
Query: 317 STGYSPSQPGYSPSSTSQYTP 255
S YSP+ P YSP+S QY+P
Sbjct: 1704 S--YSPTSPQYSPTS-PQYSP 1721
Score = 101 bits (252), Expect = 2e-20
Identities = 51/82 (62%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ
Sbjct: 1672 PTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQ------ 1725
Query: 308 YSPSQPGYSPSSTSQYTPQTND 243
YSP P YSP S S+ + D
Sbjct: 1726 YSPGSPLYSPESESKSKDEKKD 1747
Score = 100 bits (250), Expect = 4e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP +YSP+SP S SP YSP+SP
Sbjct: 1602 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1661
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S QY+P
Sbjct: 1662 SYSPTSPSYSPTSPSYSPTS-PQYSP 1686
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1560 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1619
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1620 SYSPTSPSYSPTSPSYSPTSPS-YSP 1644
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1581 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1640
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1641 SYSPTSPSYSPTSPSYSPTSPS-YSP 1665
Score = 96.7 bits (239), Expect = 7e-19
Identities = 50/88 (56%), Positives = 61/88 (69%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSPYS----------PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
P+SP+S TSP Y TSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+
Sbjct: 1530 PTSPFSYGATSPSFGGVTSPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1589
Query: 335 SPQFSP-STGYSPSQPGYSPSSTSQYTP 255
SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1590 SPSYSPTSPSYSPTSPSYSPTSPS-YSP 1616
[80][TOP]
>UniRef100_A9U396 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9U396_PHYPA
Length = 1742
Score = 112 bits (281), Expect = 1e-23
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y+P+SP +SP S
Sbjct: 1622 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYAPTSPAYSPTSP 1681
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ PGYSP+S S Y+P +
Sbjct: 1682 SYSPTSPGYSPTSPS-YSPSS 1701
Score = 108 bits (271), Expect = 1e-22
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+Y+P+SP S SP YSP+SP +SP S
Sbjct: 1580 PTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSP 1639
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1640 SYSPTSPSYSPTSPS-YSP 1657
Score = 108 bits (271), Expect = 1e-22
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSY+P+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1587 PTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1646
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1647 SYSPTSPSYSPTSPA-YSP 1664
Score = 108 bits (270), Expect = 2e-22
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP + SP YSP+SP +SP S
Sbjct: 1573 PTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSP 1632
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1633 SYSPTSPSYSPTSPS-YSP 1650
Score = 108 bits (269), Expect = 2e-22
Identities = 52/79 (65%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1601 PTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1660
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S + Y+P
Sbjct: 1661 AYSPTSPSYAPTSPA-YSP 1678
Score = 108 bits (269), Expect = 2e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSY+PTSP+YSP+SP+YSP+SP S SP YSPSSP +SP S
Sbjct: 1650 PTSPSYSPTSPAYSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSP 1709
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSP+S +Y+P +
Sbjct: 1710 SYSPTSPAYSPTS-PRYSPSS 1729
Score = 107 bits (267), Expect = 4e-22
Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP YSPTSPSYSP+SP YSP+SP S SP Y+P+SP +SP S
Sbjct: 1566 PTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSP 1625
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1626 SYSPTSPSYSPTSPS-YSP 1643
Score = 105 bits (262), Expect = 2e-21
Identities = 53/79 (67%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP YSP SP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1538 PSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSP 1597
Query: 311 GYSPSQPGYSPSSTSQYTP 255
GYSP+ P YSP+S S Y P
Sbjct: 1598 GYSPTSPSYSPTSPS-YAP 1615
Score = 104 bits (259), Expect = 3e-21
Identities = 52/79 (65%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1552 PLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSP 1611
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1612 SYAPTSPSYSPTSPS-YSP 1629
Score = 103 bits (257), Expect = 6e-21
Identities = 52/79 (65%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP SP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1545 PSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSP 1604
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S S Y+P
Sbjct: 1605 SYSPTSPSYAPTSPS-YSP 1622
Score = 103 bits (256), Expect = 8e-21
Identities = 49/69 (71%), Positives = 58/69 (84%), Gaps = 2/69 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSP YSPTSPSYSPSSP+YSP+SP S SP YSP+SP++SPS+
Sbjct: 1671 PTSPAYSPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSPSYSPTSPAYSPTSPRYSPSSP 1730
Query: 311 GYSPSQPGY 285
YSP+ P Y
Sbjct: 1731 SYSPTSPSY 1739
Score = 100 bits (250), Expect = 4e-20
Identities = 48/75 (64%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Frame = -3
Query: 476 PYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSP 300
P+SP+SP YSP+SP YSP SP YSP+SP YSP+SP S SP YSP+SP +SP S YSP
Sbjct: 1535 PFSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSP 1594
Query: 299 SQPGYSPSSTSQYTP 255
+ PGYSP+S S Y+P
Sbjct: 1595 TSPGYSPTSPS-YSP 1608
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP + SP YSP+SP +SP S
Sbjct: 1629 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYAPTSPAYSPTSPSYSPTSP 1688
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
GYSP+ P YSP+S S Y+P
Sbjct: 1689 GYSPTSPSYSPSSPSYSPTSPS-YSP 1713
Score = 97.8 bits (242), Expect = 3e-19
Identities = 54/82 (65%), Positives = 60/82 (73%), Gaps = 9/82 (10%)
Frame = -3
Query: 485 PSSP-YSPTS-------PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTS P YSPTSPSYSPTSP YSP+SP+YSPSSP S SP YSP+SP
Sbjct: 1657 PTSPAYSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSPSYSPTSP 1716
Query: 329 QFSP-STGYSPSQPGYSPSSTS 267
+SP S YSPS P YSP+S S
Sbjct: 1717 AYSPTSPRYSPSSPSYSPTSPS 1738
Score = 97.1 bits (240), Expect = 6e-19
Identities = 52/86 (60%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTS-------PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTS P+YSPTSP+YSPTSPSY+P+SP YSP+SP S SP YSP+SP
Sbjct: 1636 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPTSP 1695
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
+SPS+ YSP+ P YSP+S + Y+P
Sbjct: 1696 SYSPSSPSYSPTSPSYSPTSPA-YSP 1720
Score = 87.4 bits (215), Expect = 4e-16
Identities = 45/64 (70%), Positives = 50/64 (78%), Gaps = 4/64 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSP 318
P+SP YSPTSP YSPTSPSYSP+SPSYSP+SP+YSP+SP S SP YSPSSP SP
Sbjct: 1678 PTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSPSYSPTSPAYSPTSPRYSPSSPSYSPTSP 1737
Query: 317 STGY 306
S Y
Sbjct: 1738 SYRY 1741
Score = 68.6 bits (166), Expect = 2e-10
Identities = 43/81 (53%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP- 318
PS SP S P SPS SPSSP YSP SP S SP YSP+SP +SP
Sbjct: 1515 PSLRASPLSDAQFSPYVGNMPFSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPT 1574
Query: 317 STGYSPSQPGYSPSSTSQYTP 255
S GYSP+ PGYSP+S S Y+P
Sbjct: 1575 SPGYSPTSPGYSPTSPS-YSP 1594
[81][TOP]
>UniRef100_C4R4Y0 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4R4Y0_PICPG
Length = 1743
Score = 112 bits (281), Expect = 1e-23
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1590 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSP 1649
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1650 QYSPTSPQYSPTS-PQYSP 1667
Score = 112 bits (280), Expect = 1e-23
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1576 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSP 1635
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1636 QYSPTSPQYSPTS-PQYSP 1653
Score = 112 bits (279), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1555 PTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1614
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1615 SYSPTSPSYSPTS-PQYSP 1632
Score = 111 bits (277), Expect = 3e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1548 PTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1607
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1608 SYSPTSPSYSPTSPS-YSP 1625
Score = 111 bits (277), Expect = 3e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1562 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1621
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1622 SYSPTSPQYSPTS-PQYSP 1639
Score = 108 bits (271), Expect = 1e-22
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1611 PTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1670
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1671 QYSPTSPQYSPTS-PQYSP 1688
Score = 108 bits (271), Expect = 1e-22
Identities = 56/92 (60%), Positives = 67/92 (72%), Gaps = 5/92 (5%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1653 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1712
Query: 311 GYSPSQPGYSPSSTSQYTP---QTNDQDERGQ 225
YSP+ P YSP+S QY+P N + + G+
Sbjct: 1713 QYSPTSPQYSPAS-PQYSPSRHSPNGESKEGE 1743
Score = 108 bits (270), Expect = 2e-22
Identities = 54/79 (68%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1632 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1691
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1692 QYSPTSPQYSPTS-PQYSP 1709
Score = 107 bits (266), Expect = 5e-22
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP ++PTSP YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1541 PTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1600
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1601 SYSPTSPSYSPTSPS-YSP 1618
Score = 100 bits (250), Expect = 4e-20
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP YSP+SP S SP YSP+SP
Sbjct: 1597 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1656
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
Q+SP S YSP+ P YSP+S QY+P
Sbjct: 1657 QYSPTSPQYSPTSPQYSPTS-PQYSP 1681
Score = 100 bits (248), Expect = 7e-20
Identities = 47/77 (61%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S ++PTSP ++PTSP YSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1536 SPGFAPTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1595
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1596 SPTSPSYSPTSPS-YSP 1611
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/86 (62%), Positives = 62/86 (72%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP YSPTSP YS P+SP YSP+SP S SP YSP+SP
Sbjct: 1618 PTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1677
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
Q+SP S YSP+ P YSP+S QY+P
Sbjct: 1678 QYSPTSPQYSPTSPQYSPTS-PQYSP 1702
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/86 (62%), Positives = 62/86 (72%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP YSPTSP YS P+SP YSP+SP S SP YSP+SP
Sbjct: 1639 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1698
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
Q+SP S YSP+ P YSP+S QY+P
Sbjct: 1699 QYSPTSPQYSPTSPQYSPTS-PQYSP 1723
Score = 95.5 bits (236), Expect = 2e-18
Identities = 45/76 (59%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYS 303
SPY PTSP S TSP ++PTSP ++P+SP YSP+SP S SP YSP+SP +SP S YS
Sbjct: 1523 SPYQPTSPGLSATSPGFAPTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYS 1582
Query: 302 PSQPGYSPSSTSQYTP 255
P+ P YSP+S S Y+P
Sbjct: 1583 PTSPSYSPTSPS-YSP 1597
[82][TOP]
>UniRef100_B6JYP8 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6JYP8_SCHJY
Length = 1748
Score = 112 bits (281), Expect = 1e-23
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1557 PSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1616
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1617 SYSPTSPSYSPTSPS-YSP 1634
Score = 112 bits (281), Expect = 1e-23
Identities = 57/95 (60%), Positives = 71/95 (74%), Gaps = 8/95 (8%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1620 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1679
Query: 311 GYSPSQPGYSPSSTS------QYTPQTNDQDERGQ 225
YSP+ P YSP+S S Y+P + Q+ +G+
Sbjct: 1680 SYSPTSPSYSPTSPSYSPTSPSYSPGHSAQNAQGR 1714
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1578 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1637
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1638 SYSPTSPSYSPTSPS-YSP 1655
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1599 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1658
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1659 SYSPTSPSYSPTSPS-YSP 1676
Score = 110 bits (274), Expect = 6e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1550 PSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1609
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1610 SYSPTSPSYSPTSPS-YSP 1627
Score = 105 bits (262), Expect = 2e-21
Identities = 55/92 (59%), Positives = 65/92 (70%), Gaps = 15/92 (16%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 318
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP
Sbjct: 1648 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPGHS 1707
Query: 317 -----------STGYSPSQPGYSPSSTSQYTP 255
S YSP+ P YSP+S S Y+P
Sbjct: 1708 AQNAQGRMSPRSPVYSPTSPSYSPTSPS-YSP 1738
Score = 104 bits (259), Expect = 3e-21
Identities = 51/78 (65%), Positives = 64/78 (82%), Gaps = 2/78 (2%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
SSP +SP+SP+YSP+SP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1544 SSPGFSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1603
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1604 YSPTSPSYSPTSPS-YSP 1620
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1564 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1623
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1624 SYSPTSPSYSPTSPSYSPTSPS-YSP 1648
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1585 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1644
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1645 SYSPTSPSYSPTSPSYSPTSPS-YSP 1669
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1606 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1665
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1666 SYSPTSPSYSPTSPSYSPTSPS-YSP 1690
Score = 89.4 bits (220), Expect = 1e-16
Identities = 48/84 (57%), Positives = 55/84 (65%), Gaps = 14/84 (16%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS-------------SPYNSGVSPD 348
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S SP
Sbjct: 1669 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPGHSAQNAQGRMSPRSPVYSPTSPS 1728
Query: 347 YSPSSPQFSPSTGYSPSQPGYSPS 276
YSP+SP YSP+ P YSP+
Sbjct: 1729 YSPTSP------SYSPTSPRYSPN 1746
Score = 85.5 bits (210), Expect = 2e-15
Identities = 48/84 (57%), Positives = 58/84 (69%), Gaps = 8/84 (9%)
Frame = -3
Query: 482 SSPYSPT--SPNY-SP----TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 324
+SPY SP Y SP +SP +SP+SPSYSPSSP YSP+SP S SP YSP+SP +
Sbjct: 1524 ASPYGADARSPGYMSPFSGASSPGFSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSY 1583
Query: 323 SP-STGYSPSQPGYSPSSTSQYTP 255
SP S YSP+ P YSP+S S Y+P
Sbjct: 1584 SPTSPSYSPTSPSYSPTSPS-YSP 1606
[83][TOP]
>UniRef100_B5RSM9 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
RepID=B5RSM9_DEBHA
Length = 1749
Score = 112 bits (281), Expect = 1e-23
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1630 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSP 1689
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1690 QYSPTSPSYSPTSPS-YSP 1707
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1574 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1633
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1634 SYSPTSPSYSPTSPS-YSP 1651
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1595 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1654
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1655 SYSPTSPSYSPTSPS-YSP 1672
Score = 111 bits (277), Expect = 3e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1616 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1675
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1676 SYSPTSPQYSPTS-PQYSP 1693
Score = 110 bits (274), Expect = 6e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1651 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSP 1710
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1711 QYSPTSPQYSPTS-PQYSP 1728
Score = 109 bits (273), Expect = 8e-23
Identities = 53/77 (68%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1555 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1614
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1615 SPTSPSYSPTSPS-YSP 1630
Score = 103 bits (258), Expect = 5e-21
Identities = 51/77 (66%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S Y TSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1548 SPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1607
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1608 SPTSPSYSPTSPS-YSP 1623
Score = 103 bits (258), Expect = 5e-21
Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSP 318
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP SP
Sbjct: 1644 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSP 1703
Query: 317 STGYSPSQPGYSPSSTSQYTP 255
S YSP+ P YSP+S QY+P
Sbjct: 1704 S--YSPTSPQYSPTS-PQYSP 1721
Score = 103 bits (256), Expect = 8e-21
Identities = 51/82 (62%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ
Sbjct: 1672 PTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQ------ 1725
Query: 308 YSPSQPGYSPSSTSQYTPQTND 243
YSP P YSP S S+ + D
Sbjct: 1726 YSPGSPSYSPESESKSKDEKKD 1747
Score = 100 bits (250), Expect = 4e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP +YSP+SP S SP YSP+SP
Sbjct: 1602 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1661
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S QY+P
Sbjct: 1662 SYSPTSPSYSPTSPSYSPTS-PQYSP 1686
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1560 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1619
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1620 SYSPTSPSYSPTSPSYSPTSPS-YSP 1644
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1581 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1640
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1641 SYSPTSPSYSPTSPSYSPTSPS-YSP 1665
Score = 96.7 bits (239), Expect = 7e-19
Identities = 50/88 (56%), Positives = 61/88 (69%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSPYS----------PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
P+SP+S TSP Y TSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+
Sbjct: 1530 PTSPFSYGATSPSFGGVTSPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1589
Query: 335 SPQFSP-STGYSPSQPGYSPSSTSQYTP 255
SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1590 SPSYSPTSPSYSPTSPSYSPTSPS-YSP 1616
[84][TOP]
>UniRef100_A1YIA7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pichia kudriavzevii
RepID=A1YIA7_ISSOR
Length = 1647
Score = 112 bits (281), Expect = 1e-23
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1528 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSP 1587
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1588 QYSPTSPQYSPTS-PQYSP 1605
Score = 112 bits (280), Expect = 1e-23
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1521 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSP 1580
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1581 QYSPTSPQYSPTS-PQYSP 1598
Score = 111 bits (277), Expect = 3e-23
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1514 PTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSP 1573
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1574 QYSPTSPQYSPTS-PQYSP 1591
Score = 108 bits (271), Expect = 1e-22
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1549 PTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1608
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1609 QYSPTSPQYSPTS-PQYSP 1626
Score = 108 bits (269), Expect = 2e-22
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1507 PTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1566
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1567 QYSPTSPQYSPTS-PQYSP 1584
Score = 108 bits (269), Expect = 2e-22
Identities = 54/79 (68%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1570 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1629
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1630 QYSPTSPQYSPTSPS-YSP 1647
Score = 107 bits (268), Expect = 3e-22
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1486 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSP 1545
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1546 SYSPTSPSYSPTSPS-YSP 1563
Score = 107 bits (268), Expect = 3e-22
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1500 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1559
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1560 SYSPTSPQYSPTS-PQYSP 1577
Score = 107 bits (266), Expect = 5e-22
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1479 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSP 1538
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1539 SYSPTSPSYSPTSPS-YSP 1556
Score = 106 bits (265), Expect = 7e-22
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1472 PTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1531
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1532 SYSPTSPSYSPTSPS-YSP 1549
Score = 106 bits (264), Expect = 9e-22
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP Y PTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1465 PTSPSYGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1524
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1525 AYSPTSPSYSPTSPS-YSP 1542
Score = 103 bits (258), Expect = 5e-21
Identities = 50/77 (64%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S Y PTSP+Y PTSPSYSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1460 SPSYGPTSPSYGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1519
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1520 SPTSPAYSPTSPS-YSP 1535
Score = 100 bits (250), Expect = 4e-20
Identities = 50/80 (62%), Positives = 60/80 (75%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P+SP Y TSP+Y PTSPSY PTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1450 PTSPFGYGATSPSYGPTSPSYGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1509
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1510 PAYSPTSPAYSPTSPA-YSP 1528
Score = 100 bits (250), Expect = 4e-20
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP YSP+SP S SP YSP+SP
Sbjct: 1535 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1594
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
Q+SP S YSP+ P YSP+S QY+P
Sbjct: 1595 QYSPTSPQYSPTSPQYSPTS-PQYSP 1619
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/86 (62%), Positives = 62/86 (72%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP YSPTSP YS P+SP YSP+SP S SP YSP+SP
Sbjct: 1556 PTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1615
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
Q+SP S YSP+ P YSP+S QY+P
Sbjct: 1616 QYSPTSPQYSPTSPQYSPTS-PQYSP 1640
[85][TOP]
>UniRef100_Q99366 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99366_SOYBN
Length = 625
Score = 112 bits (280), Expect = 1e-23
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 463 PTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 522
Query: 311 GYSPSQPGYSPSSTSQYTP 255
GYSP+ P YSP+S S Y+P
Sbjct: 523 GYSPTSPSYSPTSPS-YSP 540
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 456 PTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 515
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ PGYSP+S S Y+P
Sbjct: 516 AYSPTSPGYSPTSPS-YSP 533
Score = 111 bits (277), Expect = 3e-23
Identities = 56/79 (70%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 407 PSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 466
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 467 AYSPTSPAYSPTSPS-YSP 484
Score = 110 bits (275), Expect = 5e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 414 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSP 473
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 474 AYSPTSPSYSPTSPS-YSP 491
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 435 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSP 494
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 495 SYSPTSPSYSPTSPS-YSP 512
Score = 109 bits (273), Expect = 8e-23
Identities = 55/79 (69%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP YSPTSP YSPTSP+YSPSSP YSP+SP S SP YSP+SP +SP S
Sbjct: 379 PSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSP 438
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 439 SYSPTSPSYSPTSPS-YSP 456
Score = 109 bits (272), Expect = 1e-22
Identities = 55/79 (69%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP YSPTSP YSPTSP YSP+SPTYSPSSP S SP YSP+SP +SP S
Sbjct: 372 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 431
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 432 SYSPTSPSYSPTSPS-YSP 449
Score = 109 bits (272), Expect = 1e-22
Identities = 53/79 (67%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 477 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSP 536
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P S ++Y+P
Sbjct: 537 SYSPTSPSYNPQS-AKYSP 554
Score = 107 bits (267), Expect = 4e-22
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 400 PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 459
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 460 AYSPTSPAYSPTSPA-YSP 477
Score = 105 bits (263), Expect = 1e-21
Identities = 51/78 (65%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSPTSP+YSPTSP YSP+SP+YSP+SP S SP Y+P S ++SPS
Sbjct: 498 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLA 557
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSPS P SPS S Y+P
Sbjct: 558 YSPSSPRLSPS--SPYSP 573
Score = 100 bits (250), Expect = 4e-20
Identities = 51/78 (65%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
SSP YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 366 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 425
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 426 YSPTSPSYSPTSPS-YSP 442
Score = 99.4 bits (246), Expect = 1e-19
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 421 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSP 480
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 481 SYSPTSPSYSPTSPSYSPTSPS-YSP 505
Score = 97.4 bits (241), Expect = 4e-19
Identities = 56/92 (60%), Positives = 64/92 (69%), Gaps = 15/92 (16%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTY-------------SPSSPYNSGVSPD 348
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+Y SPSSP S SP
Sbjct: 512 PTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSP- 570
Query: 347 YSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
YSP+SP +SP S YSP+ P YSPSS + Y+P
Sbjct: 571 YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSP 601
Score = 94.7 bits (234), Expect = 3e-18
Identities = 51/86 (59%), Positives = 63/86 (73%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP+YSP+SP YS P+SP+YSP+SP S SP YSP+SP
Sbjct: 386 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSP 445
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + Y+P
Sbjct: 446 SYSPTSPSYSPTSPAYSPTSPA-YSP 470
Score = 89.7 bits (221), Expect = 9e-17
Identities = 53/92 (57%), Positives = 57/92 (61%), Gaps = 20/92 (21%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSY-------------SPSSPTYSPSSPYN------ 366
P+SP YSPTSP+YSPTSPSYSPTSPSY SPSSP SPSSPY+
Sbjct: 519 PTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPYSPTSPNY 578
Query: 365 SGVSPDYSPSSPQFSPSTGYSPSQPGYSPSST 270
S SP YSP+SP YSPS P YSPS T
Sbjct: 579 SPTSPSYSPTSP------SYSPSSPTYSPSRT 604
Score = 86.7 bits (213), Expect = 7e-16
Identities = 44/68 (64%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Frame = -3
Query: 452 YSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSP 279
+SPTS P YSP+SP YSPSSP YSP+SP S SP YSP+SP +SPS+ GYSP+ P YSP
Sbjct: 362 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP 421
Query: 278 SSTSQYTP 255
+S S Y+P
Sbjct: 422 TSPS-YSP 428
Score = 68.9 bits (167), Expect = 2e-10
Identities = 46/85 (54%), Positives = 56/85 (65%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSPYSPTSP-NYSPT--SPSYSPTS-PSYSPSSPTYSPSSPYNSG---VSPDYSPSSPQ 327
P+ SPT+ +SP ++SPTS P YSPSSP YSPSSP G SP YSP+SP
Sbjct: 341 PNLRLSPTTDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSP---GYSPTSPGYSPTSPG 397
Query: 326 FSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSPS PGYSP+S + Y+P
Sbjct: 398 YSPTSPTYSPSSPGYSPTSPA-YSP 421
[86][TOP]
>UniRef100_A7NVN7 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7NVN7_VITVI
Length = 1010
Score = 112 bits (280), Expect = 1e-23
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 894 PTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 953
Query: 311 GYSPSQPGYSPSSTSQYTP 255
GYSP+ P YSP+S S Y+P
Sbjct: 954 GYSPTSPSYSPTSPS-YSP 971
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 845 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSP 904
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 905 AYSPTSPSYSPTSPS-YSP 922
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 887 PTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 946
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ PGYSP+S S Y+P
Sbjct: 947 AYSPTSPGYSPTSPS-YSP 964
Score = 110 bits (276), Expect = 4e-23
Identities = 56/79 (70%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S SP YSP+SP +SP S
Sbjct: 789 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 848
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 849 SYSPTSPSYSPTSPS-YSP 866
Score = 110 bits (276), Expect = 4e-23
Identities = 54/79 (68%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 908 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSP 967
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+PSS ++Y+P
Sbjct: 968 SYSPTSPSYNPSS-AKYSP 985
Score = 109 bits (273), Expect = 8e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 831 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSP 890
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 891 SYSPTSPAYSPTSPA-YSP 908
Score = 109 bits (272), Expect = 1e-22
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 824 PSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 883
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 884 VYSPTSPSYSPTSPA-YSP 901
Score = 108 bits (271), Expect = 1e-22
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 866 PTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSP 925
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 926 SYSPTSPSYSPTSPS-YSP 943
Score = 107 bits (267), Expect = 4e-22
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 817 PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 876
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 877 SYSPTSPVYSPTSPS-YSP 894
Score = 107 bits (267), Expect = 4e-22
Identities = 52/78 (66%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSPTSP+YSPTSP YSP+SP+YSP+SP S SP Y+PSS ++SPS
Sbjct: 929 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSLA 988
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSPS P SPS S Y+P
Sbjct: 989 YSPSSPRLSPS--SPYSP 1004
Score = 105 bits (261), Expect = 2e-21
Identities = 53/79 (67%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 782 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 841
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 842 SYSPTSPSYSPTSPS-YSP 859
Score = 104 bits (260), Expect = 3e-21
Identities = 49/73 (67%), Positives = 59/73 (80%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSP+SP YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 810 PTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 869
Query: 311 GYSPSQPGYSPSS 273
YSP+ P YSP+S
Sbjct: 870 SYSPTSPSYSPTS 882
Score = 102 bits (253), Expect = 2e-20
Identities = 52/78 (66%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
SSP YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S SP YSPSSP +SP S
Sbjct: 776 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 835
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 836 YSPTSPSYSPTSPS-YSP 852
Score = 99.0 bits (245), Expect = 1e-19
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 852 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSP 911
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 912 SYSPTSPSYSPTSPSYSPTSPS-YSP 936
Score = 97.1 bits (240), Expect = 6e-19
Identities = 53/86 (61%), Positives = 62/86 (72%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP YSPTSP+YS P+SP YSP+SP S SP YSP+SP
Sbjct: 796 PTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSP 855
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S S Y+P
Sbjct: 856 SYSPTSPSYSPTSPSYSPTSPS-YSP 880
Score = 84.7 bits (208), Expect = 3e-15
Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
Frame = -3
Query: 452 YSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSP 279
+SPTS P YSP+SP YSPSSP YSP+SP S SP YSP+SP +SP S YSPS PGYSP
Sbjct: 772 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 831
Query: 278 SSTSQYTP 255
+S + Y+P
Sbjct: 832 TSPA-YSP 838
Score = 68.2 bits (165), Expect = 3e-10
Identities = 46/85 (54%), Positives = 54/85 (63%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSPYSP-TSPNYSPT--SPSYSPTS-PSYSPSSPTYSPSSPYNSG---VSPDYSPSSPQ 327
P+ SP T +SP ++SPTS P YSPSSP YSPSSP G SP YSP+SP
Sbjct: 751 PNLRLSPITDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSP---GYSPTSPGYSPTSPG 807
Query: 326 FSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S GYSP+ P YSPSS Y+P
Sbjct: 808 YSPTSPGYSPTSPTYSPSSPG-YSP 831
Score = 53.9 bits (128), Expect = 5e-06
Identities = 31/52 (59%), Positives = 35/52 (67%), Gaps = 14/52 (26%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSY-------------SPTSPSYSPSSPTYSPSSP 372
P+SP YSPTSP+YSPTSPSY SP+SP SPSSP YSP+SP
Sbjct: 957 PTSPSYSPTSPSYSPTSPSYNPSSAKYSPSLAYSPSSPRLSPSSP-YSPTSP 1007
[87][TOP]
>UniRef100_Q5ACI7 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=Q5ACI7_CANAL
Length = 1728
Score = 112 bits (280), Expect = 1e-23
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1608 PTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSP 1667
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1668 SYSPTSPQYSPTSPS-YSP 1685
Score = 111 bits (277), Expect = 3e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1636 PTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSP 1695
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1696 QYSPTSPQYSPTS-PQYSP 1713
Score = 110 bits (276), Expect = 4e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1601 PTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSP 1660
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1661 QYSPTSPSYSPTS-PQYSP 1678
Score = 110 bits (276), Expect = 4e-23
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSPSYSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1643 PTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPTSP 1702
Query: 311 GYSPSQPGYSPSSTSQYTPQTNDQDE 234
YSP+ P YSP S Y P+ +DE
Sbjct: 1703 QYSPTSPQYSPGSPG-YEPEPPKKDE 1727
Score = 109 bits (273), Expect = 8e-23
Identities = 53/79 (67%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+Y+PTSP+YSPTSPSY+P+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1559 PTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSP 1618
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1619 SYSPTSPSYSPTSPS-YSP 1636
Score = 108 bits (271), Expect = 1e-22
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1587 PTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 1646
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1647 SYSPTSPSYSPTS-PQYSP 1664
Score = 108 bits (270), Expect = 2e-22
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1594 PTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSP 1653
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1654 SYSPTSPQYSPTSPS-YSP 1671
Score = 108 bits (270), Expect = 2e-22
Identities = 55/79 (69%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1629 PTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSP 1688
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1689 QYSPTSPQYSPTS-PQYSP 1706
Score = 107 bits (267), Expect = 4e-22
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP Y+PTSP YSPTSP+YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1580 PTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSP 1639
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1640 AYSPTSPSYSPTSPS-YSP 1657
Score = 105 bits (262), Expect = 2e-21
Identities = 49/78 (62%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
P YSPTSP+YSPTSPSY+PTSP+YSP+SP+Y+P+SP S SP Y+P+SP +SP S
Sbjct: 1539 PGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPA 1598
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1599 YSPTSPSYSPTS-PQYSP 1615
Score = 101 bits (251), Expect = 3e-20
Identities = 55/86 (63%), Positives = 66/86 (76%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSP+YS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1615 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSP 1674
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
Q+SP S YSP+ P YSP+S QY+P
Sbjct: 1675 QYSPTSPSYSPTSPQYSPTS-PQYSP 1699
Score = 96.3 bits (238), Expect = 9e-19
Identities = 52/86 (60%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP Y+PTSP YSPTSPSY+PTSP+YS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1566 PTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSP 1625
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1626 SYSPTSPSYSPTSPAYSPTSPS-YSP 1650
Score = 92.4 bits (228), Expect = 1e-17
Identities = 45/77 (58%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S Y+ YSPTSPSYSPTSPSY+P+SP YSP+SP + SP YSP+SP ++P S Y
Sbjct: 1533 SPGYTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAY 1592
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1593 SPTSPAYSPTSPS-YSP 1608
Score = 83.6 bits (205), Expect = 6e-15
Identities = 40/73 (54%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = -3
Query: 470 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQ 294
S TSP Y+ YSPTSPSYSP+SP+Y+P+SP S SP Y+P+SP +SP S Y+P+
Sbjct: 1530 SITSPGYTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTS 1589
Query: 293 PGYSPSSTSQYTP 255
P YSP+S + Y+P
Sbjct: 1590 PAYSPTSPA-YSP 1601
[88][TOP]
>UniRef100_C4YN85 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=C4YN85_CANAL
Length = 1742
Score = 112 bits (280), Expect = 1e-23
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1622 PTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSP 1681
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1682 SYSPTSPQYSPTSPS-YSP 1699
Score = 111 bits (277), Expect = 3e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1650 PTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSP 1709
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1710 QYSPTSPQYSPTS-PQYSP 1727
Score = 110 bits (276), Expect = 4e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1615 PTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSP 1674
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1675 QYSPTSPSYSPTS-PQYSP 1692
Score = 110 bits (276), Expect = 4e-23
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSPSYSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1657 PTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPTSP 1716
Query: 311 GYSPSQPGYSPSSTSQYTPQTNDQDE 234
YSP+ P YSP S Y P+ +DE
Sbjct: 1717 QYSPTSPQYSPGSPG-YEPEPPKKDE 1741
Score = 109 bits (273), Expect = 8e-23
Identities = 53/79 (67%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+Y+PTSP+YSPTSPSY+P+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1573 PTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSP 1632
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1633 SYSPTSPSYSPTSPS-YSP 1650
Score = 108 bits (271), Expect = 1e-22
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1601 PTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 1660
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1661 SYSPTSPSYSPTS-PQYSP 1678
Score = 108 bits (270), Expect = 2e-22
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1608 PTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSP 1667
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1668 SYSPTSPQYSPTSPS-YSP 1685
Score = 108 bits (270), Expect = 2e-22
Identities = 55/79 (69%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1643 PTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSP 1702
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1703 QYSPTSPQYSPTS-PQYSP 1720
Score = 107 bits (267), Expect = 4e-22
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP Y+PTSP YSPTSP+YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1594 PTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSP 1653
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1654 AYSPTSPSYSPTSPS-YSP 1671
Score = 104 bits (260), Expect = 3e-21
Identities = 51/79 (64%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+Y+PTSP+YSPTSPSY+P+SP YSP+SP + SP YSP+SP +SP S
Sbjct: 1559 PTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSP 1618
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1619 SYSPTSPQYSPTSPS-YSP 1636
Score = 102 bits (255), Expect = 1e-20
Identities = 47/78 (60%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
P YSPTSP+YSPTSPSY+PTSP+YSP+SP+Y+P+SP S SP Y+P+SP +SP S
Sbjct: 1539 PGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPS 1598
Query: 308 YSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S + Y+P
Sbjct: 1599 YAPTSPAYSPTSPA-YSP 1615
Score = 101 bits (251), Expect = 3e-20
Identities = 55/86 (63%), Positives = 66/86 (76%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSP+YS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1629 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSP 1688
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
Q+SP S YSP+ P YSP+S QY+P
Sbjct: 1689 QYSPTSPSYSPTSPQYSPTS-PQYSP 1713
Score = 96.3 bits (238), Expect = 9e-19
Identities = 52/86 (60%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP Y+PTSP YSPTSPSY+PTSP+YS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1580 PTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSP 1639
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1640 SYSPTSPSYSPTSPAYSPTSPS-YSP 1664
Score = 94.7 bits (234), Expect = 3e-18
Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTS-------PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTS P YSPTSPSY+PTSP+YSP+SP+Y+P+SP S SP Y+P+SP
Sbjct: 1545 PTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSP 1604
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S QY+P
Sbjct: 1605 AYSPTSPAYSPTSPSYSPTS-PQYSP 1629
Score = 90.1 bits (222), Expect = 7e-17
Identities = 43/77 (55%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S Y+ YSPTSPSYSPTSPSY+P+SP YSP+SP + SP YSP+SP ++P S Y
Sbjct: 1533 SPGYTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAY 1592
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P Y+P+S + Y+P
Sbjct: 1593 SPTSPSYAPTSPA-YSP 1608
Score = 84.3 bits (207), Expect = 4e-15
Identities = 41/73 (56%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Frame = -3
Query: 470 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQ 294
S TSP Y+ YSPTSPSYSP+SP+Y+P+SP S SP Y+P+SP +SP S Y+P+
Sbjct: 1530 SITSPGYTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTS 1589
Query: 293 PGYSPSSTSQYTP 255
P YSP+S S Y P
Sbjct: 1590 PAYSPTSPS-YAP 1601
[89][TOP]
>UniRef100_UPI0000F24379 DNA-directed RNA polymerase II largest subunit (RNA polymerase II
subunit 1) (B220) n=1 Tax=Pichia stipitis CBS 6054
RepID=UPI0000F24379
Length = 1739
Score = 112 bits (279), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1615 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1674
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1675 SYSPTSPSYSPTS-PQYSP 1692
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1573 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1632
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1633 SYSPTSPSYSPTSPS-YSP 1650
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1594 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1653
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1654 SYSPTSPSYSPTSPS-YSP 1671
Score = 111 bits (278), Expect = 2e-23
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1636 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSP 1695
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1696 QYSPTSPLYSPTS-PQYSP 1713
Score = 110 bits (275), Expect = 5e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1566 PTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1625
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1626 SYSPTSPSYSPTSPS-YSP 1643
Score = 109 bits (272), Expect = 1e-22
Identities = 53/77 (68%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1547 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1606
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1607 SPTSPSYSPTSPS-YSP 1622
Score = 108 bits (271), Expect = 1e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1657 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPLYSPTSPQYSPTSP 1716
Query: 311 GYSPSQPGYSPSSTSQYTPQTNDQ 240
YSP P YSP+S P+T D+
Sbjct: 1717 QYSPGSPEYSPNS-----PKTEDK 1735
Score = 104 bits (259), Expect = 3e-21
Identities = 51/77 (66%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S Y TSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1540 SPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1599
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1600 SPTSPSYSPTSPS-YSP 1615
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1580 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1639
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1640 SYSPTSPSYSPTSPSYSPTSPS-YSP 1664
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1601 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1660
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1661 SYSPTSPSYSPTSPSYSPTSPS-YSP 1685
Score = 100 bits (248), Expect = 7e-20
Identities = 56/98 (57%), Positives = 71/98 (72%), Gaps = 10/98 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP +YSP+SP S SP YSP+SP
Sbjct: 1643 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSP 1702
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTPQT-NDQDERGQD 222
+SP S YSP+ P YSP S +Y+P + +D++ +D
Sbjct: 1703 LYSPTSPQYSPTSPQYSPGS-PEYSPNSPKTEDKKNED 1739
Score = 99.4 bits (246), Expect = 1e-19
Identities = 54/86 (62%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1552 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1611
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1612 SYSPTSPSYSPTSPSYSPTSPS-YSP 1636
Score = 85.9 bits (211), Expect = 1e-15
Identities = 51/94 (54%), Positives = 61/94 (64%), Gaps = 17/94 (18%)
Frame = -3
Query: 485 PSSPYSPTSP-NYSP---------------TSPSYSPTSPSYSPSSPTYSPSSPYNSGVS 354
P+SP S TSP +Y TSPSYSPTSPSYSP+SP+YSP+SP S S
Sbjct: 1517 PTSP-SATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1575
Query: 353 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
P YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1576 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1608
Score = 60.8 bits (146), Expect = 4e-08
Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Frame = -3
Query: 464 TSPNYSPTSPSYSPTSP-SYSPSSPTYSPS-SPYNSGVSPDYSPSSPQFSP-STGYSPSQ 294
TS PTSPS TSP SY +SP++ S SP G SP YSP+SP +SP S YSP+
Sbjct: 1511 TSYGGQPTSPS--ATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTS 1568
Query: 293 PGYSPSSTSQYTP 255
P YSP+S + Y+P
Sbjct: 1569 PSYSPTSPA-YSP 1580
[90][TOP]
>UniRef100_UPI000186D846 predicted protein n=1 Tax=Pediculus humanus corporis
RepID=UPI000186D846
Length = 1885
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1603 PNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1662
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1663 SYSPTSPSYSPTSPS-YSP 1680
Score = 110 bits (276), Expect = 4e-23
Identities = 52/78 (66%), Positives = 65/78 (83%), Gaps = 2/78 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSRTSPSYSPTSPSYSPSSP 1718
Query: 311 GYSPSQPGYSPSSTSQYT 258
Y+P+ P +SP+S S Y+
Sbjct: 1719 NYTPASPSFSPTSPSLYS 1736
Score = 110 bits (275), Expect = 5e-23
Identities = 53/75 (70%), Positives = 62/75 (82%), Gaps = 2/75 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1624 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 311 GYSPSQPGYSPSSTS 267
YSP+ P YSP+S S
Sbjct: 1684 SYSPTSPSYSPTSPS 1698
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SPNYSP SPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1589 PTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1648
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1649 SYSPTSPSYSPTSPS-YSP 1666
Score = 110 bits (274), Expect = 6e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS-PST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +S S
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSRTSP 1704
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSPSS + YTP
Sbjct: 1705 SYSPTSPSYSPSSPN-YTP 1722
Score = 106 bits (265), Expect = 7e-22
Identities = 51/77 (66%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
SS YSPTSP+YSP+SP+YSP SPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1584 SSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1643
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1644 SPTSPSYSPTSPS-YSP 1659
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP +PTS NYSPTSPSYSP+SP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1575 PTSPSMTPTSSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1634
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1635 SYSPTSPSYSPTSPS-YSP 1652
Score = 103 bits (256), Expect = 8e-21
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 318
P+SP YSPTSP+YSPTSPSYSPTSPSYS +SP+YSP+SP S SP+Y+P+SP FSP
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSRTSPSYSPTSPSYSPSSPNYTPASPSFSPTSP 1732
Query: 317 ----STGYSPSQPGYSPSSTSQYTP 255
S YSP+ P YSP S +Y+P
Sbjct: 1733 SLYSSPRYSPASPSYSPGS-PKYSP 1756
Score = 102 bits (254), Expect = 1e-20
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP ++PTSP+ +PTS +YSPTSPSYSPSSP YSP+SP S SP YSP+SP +SP S
Sbjct: 1568 PSSPAFAPTSPSMTPTSSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPTSP 1627
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1628 SYSPTSPSYSPTSPS-YSP 1645
Score = 101 bits (252), Expect = 2e-20
Identities = 56/91 (61%), Positives = 64/91 (70%), Gaps = 14/91 (15%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPD------YSPSSPQ 327
P+SP YSPTSP+YS TSPSYSPTSPSYSPSSP Y+P+SP S SP YSP+SP
Sbjct: 1687 PTSPSYSPTSPSYSRTSPSYSPTSPSYSPSSPNYTPASPSFSPTSPSLYSSPRYSPASPS 1746
Query: 326 FSP-STGYSPSQPGYSPSSTS------QYTP 255
+SP S YSP+ P YSP+S S QYTP
Sbjct: 1747 YSPGSPKYSPTSPSYSPTSPSYASVSPQYTP 1777
Score = 101 bits (251), Expect = 3e-20
Identities = 52/89 (58%), Positives = 63/89 (70%), Gaps = 9/89 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--S 315
P SP YSPTSP+YSPTSPSY+ SP Y+P+SP YSP+SP S SP YSPSSP +P S
Sbjct: 1749 PGSPKYSPTSPSYSPTSPSYASVSPQYTPTSPQYSPTSPTYSPTSPSYSPSSPSHTPGAS 1808
Query: 314 TGYSPSQPGYSPSSTS------QYTPQTN 246
T YSP+ P YSP+S S QY+P ++
Sbjct: 1809 TRYSPTSPKYSPTSLSYSPASPQYSPSSS 1837
Score = 100 bits (250), Expect = 4e-20
Identities = 55/88 (62%), Positives = 66/88 (75%), Gaps = 9/88 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1631 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 311 GYSPSQP-------GYSPSSTSQYTPQT 249
YSP+ P YSP+S S Y+P +
Sbjct: 1691 SYSPTSPSYSRTSPSYSPTSPS-YSPSS 1717
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1610 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1669
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1670 SYSPTSPSYSPTSPSYSPTSPS-YSP 1694
Score = 100 bits (249), Expect = 5e-20
Identities = 49/78 (62%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
P+SP +SP YSP SPSYSP SP YSP+SP+YSP+SP + VSP Y+P+SPQ+SP S
Sbjct: 1729 PTSPSLYSSPRYSPASPSYSPGSPKYSPTSPSYSPTSPSYASVSPQYTPTSPQYSPTSPT 1788
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSPSS S +TP
Sbjct: 1789 YSPTSPSYSPSSPS-HTP 1805
Score = 95.9 bits (237), Expect = 1e-18
Identities = 47/77 (61%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSP+SP ++PTSPS +PTS +YSP+SP+YSPSSP S SP YSP+SP +SP S Y
Sbjct: 1563 SPSYSPSSPAFAPTSPSMTPTSSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSY 1622
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1623 SPTSPSYSPTSPS-YSP 1638
Score = 94.0 bits (232), Expect = 5e-18
Identities = 46/72 (63%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--TG 309
S+ YSPTSP YSPTS SYSP SP YSPSS YSP+SP + SPDYS SSP +SP+
Sbjct: 1808 STRYSPTSPKYSPTSLSYSPASPQYSPSSSKYSPTSPTYTPTSPDYSASSPTYSPTGPPS 1867
Query: 308 YSPSQPGYSPSS 273
YSP+ P YSP+S
Sbjct: 1868 YSPTSPTYSPTS 1879
Score = 91.7 bits (226), Expect = 2e-17
Identities = 49/82 (59%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP-SSPYNSGVSPDYSPSSPQFSP-STG 309
S Y+PTSP YSPTSP+YSPTSPSYSPSSP+++P +S S SP YSP+S +SP S
Sbjct: 1772 SPQYTPTSPQYSPTSPTYSPTSPSYSPSSPSHTPGASTRYSPTSPKYSPTSLSYSPASPQ 1831
Query: 308 YSPSQPGYSPSSTSQYTPQTND 243
YSPS YSP+S + YTP + D
Sbjct: 1832 YSPSSSKYSPTSPT-YTPTSPD 1852
Score = 82.8 bits (203), Expect = 1e-14
Identities = 53/110 (48%), Positives = 69/110 (62%), Gaps = 25/110 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPS--------YSPSSPTYSPSS-----------PYN 366
P+SP YSPTSP YSPTSPSYSP+SPS YSP+SP YSP+S P +
Sbjct: 1777 PTSPQYSPTSPTYSPTSPSYSPSSPSHTPGASTRYSPTSPKYSPTSLSYSPASPQYSPSS 1836
Query: 365 ---SGVSPDYSPSSPQFSPST-GYSPS-QPGYSPSSTSQYTPQTNDQDER 231
S SP Y+P+SP +S S+ YSP+ P YSP+S + Y+P + + D+R
Sbjct: 1837 SKYSPTSPTYTPTSPDYSASSPTYSPTGPPSYSPTSPT-YSPTSPEYDDR 1885
Score = 75.1 bits (183), Expect = 2e-12
Identities = 42/79 (53%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSP-TSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P SP SP P+ SP PS SPSYSPSSP ++P+SP + S +YSP+SP +SPS+
Sbjct: 1541 PGSPSSP-GPSNSPYVPSPGGGMSPSYSPSSPAFAPTSPSMTPTSSNYSPTSPSYSPSSP 1599
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1600 NYSPNSPSYSPTSPS-YSP 1617
Score = 65.1 bits (157), Expect = 2e-09
Identities = 44/98 (44%), Positives = 56/98 (57%), Gaps = 21/98 (21%)
Frame = -3
Query: 479 SPYSPTSPNYSPT--------SPSYSPTSPSY-SPSSPTYSPSSPY----NSGVSPDYSP 339
S +P P++SP+ SP YSP SP SPSSP S +SPY G+SP YSP
Sbjct: 1510 SGMTPGGPSFSPSGSSDASGLSPGYSPWSPQPGSPSSPGPS-NSPYVPSPGGGMSPSYSP 1568
Query: 338 SSPQFSP--------STGYSPSQPGYSPSSTSQYTPQT 249
SSP F+P S+ YSP+ P YSPSS + Y+P +
Sbjct: 1569 SSPAFAPTSPSMTPTSSNYSPTSPSYSPSSPN-YSPNS 1605
[91][TOP]
>UniRef100_UPI000186501C hypothetical protein BRAFLDRAFT_115025 n=1 Tax=Branchiostoma floridae
RepID=UPI000186501C
Length = 1956
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP SPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1624 PTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1684 SYSPTSPSYSPTSPS-YSP 1701
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1704
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1705 SYSPTSPSYSPTSPS-YSP 1722
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1725
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1726 SYSPTSPSYSPTSPS-YSP 1743
Score = 110 bits (275), Expect = 5e-23
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP + SP YSP+SP +SP S
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSP 1767
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSP+S S Y+P +
Sbjct: 1768 SYSPASPSYSPTSPS-YSPSS 1787
Score = 109 bits (273), Expect = 8e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1746
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1747 NYTPTSPKYSPTSPS-YSP 1764
Score = 109 bits (273), Expect = 8e-23
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSP+Y+PTSP YSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1729 PTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTSPSYSPSSP 1788
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP P YSPSS S Y+P +
Sbjct: 1789 NYSPQSPSYSPSSPS-YSPSS 1808
Score = 108 bits (270), Expect = 2e-22
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSP SP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1617 PTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1676
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1677 SYSPTSPSYSPTSPS-YSP 1694
Score = 108 bits (269), Expect = 2e-22
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSP SP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1610 PQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1669
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1670 SYSPTSPSYSPTSPS-YSP 1687
Score = 107 bits (268), Expect = 3e-22
Identities = 55/86 (63%), Positives = 66/86 (76%), Gaps = 7/86 (8%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSPSYSP SPSYSP+SP+YSPSSP S SP YSPSSP +SPS+
Sbjct: 1750 PTSPKYSPTSPSYSPTSPSYSPASPSYSPTSPSYSPSSPNYSPQSPSYSPSSPSYSPSSP 1809
Query: 311 -----GYSPSQPGYSPSSTSQYTPQT 249
Y+P+ P YSPSS +Y+P +
Sbjct: 1810 NPSSPKYTPTSPKYSPSS-PKYSPSS 1834
Score = 105 bits (261), Expect = 2e-21
Identities = 55/83 (66%), Positives = 64/83 (77%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNY+PTSP YSPTSPSYSP+SP+YSP+SP S SP YSPSSP +SP S
Sbjct: 1736 PTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTSPSYSPSSPNYSPQSP 1795
Query: 311 GYSPSQPG---YSPS-STSQYTP 255
YSPS P SP+ S+ +YTP
Sbjct: 1796 SYSPSSPSYSPSSPNPSSPKYTP 1818
Score = 103 bits (257), Expect = 6e-21
Identities = 51/89 (57%), Positives = 63/89 (70%), Gaps = 5/89 (5%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ---FSP 318
P+SP YSP SP Y+PTSP YSPTSPSY+P +P YSP+SP S SP YSP+SP+ +SP
Sbjct: 1867 PTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPTSPTYSPTSPKGSTYSP 1926
Query: 317 ST-GYSPSQPGYSPSSTSQYTPQTNDQDE 234
+T GYSP+ P YSP S Q ++DE
Sbjct: 1927 TTPGYSPASPTYSPESPESRATQEEEEDE 1955
Score = 103 bits (256), Expect = 8e-21
Identities = 52/80 (65%), Positives = 60/80 (75%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP +P SP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 102 bits (253), Expect = 2e-20
Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 9/88 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 318
PSSP Y+PTSP YSP+SP YSP+SP YSP+SPTYSPSS S SP YSPS+P+++P
Sbjct: 1811 PSSPKYTPTSPKYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSP 1870
Query: 317 -----STGYSPSQPGYSPSSTSQYTPQT 249
S Y+P+ P YSP+S S YTP T
Sbjct: 1871 KYSPASPTYTPTSPKYSPTSPS-YTPDT 1897
Score = 100 bits (250), Expect = 4e-20
Identities = 55/91 (60%), Positives = 64/91 (70%), Gaps = 14/91 (15%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-----YSPSSPYNSGVSPDYSPSSPQF 324
P+SP YSP+SPNYSP SPSYSP+SPSYSPSSP Y+P+SP S SP YSPSSP++
Sbjct: 1778 PTSPSYSPSSPNYSPQSPSYSPSSPSYSPSSPNPSSPKYTPTSPKYSPSSPKYSPSSPKY 1837
Query: 323 SP--------STGYSPSQPGYSPSSTSQYTP 255
SP S YSP+ P YSP ST +YTP
Sbjct: 1838 SPTSPTYSPSSAKYSPASPSYSP-STPKYTP 1867
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1631 PASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1691 SYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1712 SYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 99.0 bits (245), Expect = 1e-19
Identities = 52/82 (63%), Positives = 65/82 (79%), Gaps = 5/82 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP++SP+
Sbjct: 1701 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPT-- 1758
Query: 308 YSPSQP----GYSPSSTSQYTP 255
SPS YSP+S S Y+P
Sbjct: 1759 -SPSYSPTSPSYSPASPS-YSP 1778
Score = 99.0 bits (245), Expect = 1e-19
Identities = 52/84 (61%), Positives = 63/84 (75%), Gaps = 5/84 (5%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP Y+P+SP S SP YSP+SP +SP S
Sbjct: 1715 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASP 1774
Query: 311 GYSPSQP---GYSPSSTSQYTPQT 249
YSP+ P SP+ Y+PQ+
Sbjct: 1775 SYSPTSPSYSPSSPN----YSPQS 1794
Score = 99.0 bits (245), Expect = 1e-19
Identities = 46/81 (56%), Positives = 61/81 (75%), Gaps = 3/81 (3%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S+ YSP SP+YSP++P Y+PTSP YSP+SPTY+P+SP S SP Y+P +P++SP S Y
Sbjct: 1848 SAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKY 1907
Query: 305 SPSQPGYSPSST--SQYTPQT 249
SP+ P YSP+S S Y+P T
Sbjct: 1908 SPTSPTYSPTSPKGSTYSPTT 1928
Score = 98.2 bits (243), Expect = 2e-19
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1732
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P Y+P+S +Y+P
Sbjct: 1733 SYSPTSPSYSPTSPNYTPTS-PKYSP 1757
Score = 97.4 bits (241), Expect = 4e-19
Identities = 49/78 (62%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
PSSP +P+SP Y+PTSP YSP+SP YSPSSP YSP+SP S S YSP+SP +SPST
Sbjct: 1806 PSSP-NPSSPKYTPTSPKYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPK 1864
Query: 308 YSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S + YTP
Sbjct: 1865 YTPTSPKYSPASPT-YTP 1881
Score = 93.2 bits (230), Expect = 8e-18
Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPTSPS---------------YSPTSPSYSPSSPTYSPSSPYN 366
P+SPY P+ SP+YSP SP+ YSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PASPYIPSPGGPMSPSYSPASPAYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNY 1636
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 87.8 bits (216), Expect = 3e-16
Identities = 49/86 (56%), Positives = 60/86 (69%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
PSSP YSPTSP YSP+S YSP SPSYS P+SP YSP+SP + SP YSP+SP
Sbjct: 1832 PSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSP 1891
Query: 329 QFSPST-GYSPSQPGYSPSSTSQYTP 255
++P T YSP+ P YSP+S + Y+P
Sbjct: 1892 SYTPDTPKYSPTSPKYSPTSPT-YSP 1916
Score = 53.9 bits (128), Expect = 5e-06
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 13/90 (14%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSP 318
PS+ + + + SP++SPT S P SP P+SPY +SP YSP+SP + P
Sbjct: 1547 PSAASDASGMSPAGYSPAWSPTPGS--PGSP--GPASPYIPSPGGPMSPSYSPASPAYMP 1602
Query: 317 ---------STGYSPSQPGYSPSSTSQYTP 255
S GYSP+ P YSP+S S Y+P
Sbjct: 1603 RSPGGMTPQSPGYSPTSPSYSPTSPS-YSP 1631
[92][TOP]
>UniRef100_UPI000179348F PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179348F
Length = 1862
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1651 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1710
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1711 SYSPTSPSYSPTSPS-YSP 1728
Score = 110 bits (275), Expect = 5e-23
Identities = 56/79 (70%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1672 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1731
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS P Y+ SS S YTP
Sbjct: 1732 SYSPSSPQYAASSPS-YTP 1749
Score = 109 bits (273), Expect = 8e-23
Identities = 55/84 (65%), Positives = 65/84 (77%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSP------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 324
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +
Sbjct: 1639 PTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1698
Query: 323 SP-STGYSPSQPGYSPSSTSQYTP 255
SP S YSP+ P YSP+S S Y+P
Sbjct: 1699 SPTSPSYSPTSPSYSPTSPS-YSP 1721
Score = 100 bits (249), Expect = 5e-20
Identities = 53/93 (56%), Positives = 64/93 (68%), Gaps = 14/93 (15%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS--------- 336
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PS
Sbjct: 1700 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYAASSPSYTPSATSGTSNYK 1759
Query: 335 ----SPQFSPSTGYSPSQPGYSPSSTSQYTPQT 249
SP + S YSP+ P YSPS+ S Y+P +
Sbjct: 1760 YSPTSPSLAVSPTYSPTSPMYSPSNAS-YSPSS 1791
Score = 100 bits (248), Expect = 7e-20
Identities = 54/83 (65%), Positives = 63/83 (75%), Gaps = 8/83 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1658 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1717
Query: 311 GYSPSQP---GYSPS---STSQY 261
YSP+ P SPS S+ QY
Sbjct: 1718 SYSPTSPSYSPTSPSYSPSSPQY 1740
Score = 97.8 bits (242), Expect = 3e-19
Identities = 50/78 (64%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
P+ YSPTSP+YSPTSPSYS TS YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1626 PNYNYSPTSPSYSPTSPSYSHTS--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1683
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1684 YSPTSPSYSPTSPS-YSP 1700
Score = 93.2 bits (230), Expect = 8e-18
Identities = 53/87 (60%), Positives = 63/87 (72%), Gaps = 10/87 (11%)
Frame = -3
Query: 485 PSSP-YSPTSPNYS-----PTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 324
P+SP YSPTSP+YS PTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +
Sbjct: 1632 PTSPSYSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1691
Query: 323 SPSTGYSPSQP----GYSPSSTSQYTP 255
SP+ SPS YSP+S S Y+P
Sbjct: 1692 SPT---SPSYSPTSPSYSPTSPS-YSP 1714
Score = 92.0 bits (227), Expect = 2e-17
Identities = 51/81 (62%), Positives = 59/81 (72%), Gaps = 8/81 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSPSSP
Sbjct: 1679 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP 1738
Query: 329 QFSPSTGYSPSQPGYSPSSTS 267
Q Y+ S P Y+PS+TS
Sbjct: 1739 Q------YAASSPSYTPSATS 1753
Score = 89.0 bits (219), Expect = 2e-16
Identities = 49/76 (64%), Positives = 56/76 (73%), Gaps = 3/76 (3%)
Frame = -3
Query: 473 YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYS 303
YS SPNY SPTSPSYSPTSPSYS +S YSP+SP S SP YSP+SP +SP S YS
Sbjct: 1621 YSSMSPNYNYSPTSPSYSPTSPSYSHTS--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1678
Query: 302 PSQPGYSPSSTSQYTP 255
P+ P YSP+S S Y+P
Sbjct: 1679 PTSPSYSPTSPS-YSP 1693
Score = 80.9 bits (198), Expect = 4e-14
Identities = 48/86 (55%), Positives = 57/86 (66%), Gaps = 13/86 (15%)
Frame = -3
Query: 473 YSPTSPNYSPT----------SPSY--SPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
YSPTSP YS T SP+Y SPTSPSYSP+SP+YS +S S SP YSP+SP
Sbjct: 1604 YSPTSPQYSATQQNTPKYSSMSPNYNYSPTSPSYSPTSPSYSHTS--YSPTSPSYSPTSP 1661
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1662 SYSPTSPSYSPTSPSYSPTSPS-YSP 1686
Score = 80.5 bits (197), Expect = 5e-14
Identities = 47/98 (47%), Positives = 55/98 (56%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSS-------------PTYSPSSPYNSGV---- 357
P+SP SP YSPTSP YSP++ SYSPSS +YSPSSP S
Sbjct: 1762 PTSPSLAVSPTYSPTSPMYSPSNASYSPSSLQHTPNAGGTQYNQSYSPSSPVYSPTNFSM 1821
Query: 356 -SPDYSPSSPQFSPSTG---YSPSQPGYSPSSTSQYTP 255
SP YSP+SP +SP G YSPS P YSP+S + P
Sbjct: 1822 ASPRYSPTSPTYSPGVGSPHYSPSSPSYSPTSPNYSGP 1859
Score = 74.7 bits (182), Expect = 3e-12
Identities = 51/126 (40%), Positives = 60/126 (47%), Gaps = 48/126 (38%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP---------------------------- 393
P+SP YSPTSP+YSPTSPSYSPTSPSYSPSSP
Sbjct: 1707 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYAASSPSYTPSATSGTSNYKYSPTSPS 1766
Query: 392 ------------TYSPSSPYNSGVSPDYSPSSPQFSPSTG-------YSPSQPGYSPSST 270
YSPS + YSPSS Q +P+ G YSPS P YSP++
Sbjct: 1767 LAVSPTYSPTSPMYSPS-------NASYSPSSLQHTPNAGGTQYNQSYSPSSPVYSPTNF 1819
Query: 269 SQYTPQ 252
S +P+
Sbjct: 1820 SMASPR 1825
Score = 61.6 bits (148), Expect = 3e-08
Identities = 37/56 (66%), Positives = 40/56 (71%), Gaps = 8/56 (14%)
Frame = -3
Query: 485 PSSP-YSPT-----SPNYSPTSPSYSPT--SPSYSPSSPTYSPSSPYNSGVSPDYS 342
PSSP YSPT SP YSPTSP+YSP SP YSPSSP+YSP+SP SG PD S
Sbjct: 1809 PSSPVYSPTNFSMASPRYSPTSPTYSPGVGSPHYSPSSPSYSPTSPNYSG--PDES 1862
Score = 58.5 bits (140), Expect = 2e-07
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Frame = -3
Query: 482 SSPYSPT----SPNYS-PTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 318
+SPY P+ SPNY+ P+SP + SPS +P++ YSP+SP S + +P SP
Sbjct: 1570 TSPYVPSPSSMSPNYNYPSSPQFGSLSPSMTPTN--YSPTSPQYSATQQN-TPKYSSMSP 1626
Query: 317 STGYSPSQPGYSPSSTS 267
+ YSP+ P YSP+S S
Sbjct: 1627 NYNYSPTSPSYSPTSPS 1643
[93][TOP]
>UniRef100_UPI000179338A PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179338A
Length = 1862
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1651 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1710
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1711 SYSPTSPSYSPTSPS-YSP 1728
Score = 110 bits (275), Expect = 5e-23
Identities = 56/79 (70%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1672 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1731
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS P Y+ SS S YTP
Sbjct: 1732 SYSPSSPQYTASSPS-YTP 1749
Score = 109 bits (273), Expect = 8e-23
Identities = 55/84 (65%), Positives = 65/84 (77%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSP------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 324
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +
Sbjct: 1639 PTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1698
Query: 323 SP-STGYSPSQPGYSPSSTSQYTP 255
SP S YSP+ P YSP+S S Y+P
Sbjct: 1699 SPTSPSYSPTSPSYSPTSPS-YSP 1721
Score = 100 bits (250), Expect = 4e-20
Identities = 56/85 (65%), Positives = 64/85 (75%), Gaps = 9/85 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP +YSP+SP S SP YSP+SP
Sbjct: 1658 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1717
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYT 258
+SP S YSP+ P YSPSS QYT
Sbjct: 1718 SYSPTSPSYSPTSPSYSPSS-PQYT 1741
Score = 100 bits (249), Expect = 5e-20
Identities = 53/93 (56%), Positives = 64/93 (68%), Gaps = 14/93 (15%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS--------- 336
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PS
Sbjct: 1700 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYTASSPSYTPSATSGASNYK 1759
Query: 335 ----SPQFSPSTGYSPSQPGYSPSSTSQYTPQT 249
SP + S YSP+ P YSPS+ S Y+P +
Sbjct: 1760 YSPTSPSLAVSPTYSPTSPMYSPSNAS-YSPSS 1791
Score = 97.8 bits (242), Expect = 3e-19
Identities = 50/78 (64%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
P+ YSPTSP+YSPTSPSYS TS YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1626 PNYNYSPTSPSYSPTSPSYSHTS--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1683
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1684 YSPTSPSYSPTSPS-YSP 1700
Score = 93.2 bits (230), Expect = 8e-18
Identities = 53/87 (60%), Positives = 63/87 (72%), Gaps = 10/87 (11%)
Frame = -3
Query: 485 PSSP-YSPTSPNYS-----PTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 324
P+SP YSPTSP+YS PTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +
Sbjct: 1632 PTSPSYSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1691
Query: 323 SPSTGYSPSQP----GYSPSSTSQYTP 255
SP+ SPS YSP+S S Y+P
Sbjct: 1692 SPT---SPSYSPTSPSYSPTSPS-YSP 1714
Score = 92.0 bits (227), Expect = 2e-17
Identities = 51/81 (62%), Positives = 59/81 (72%), Gaps = 8/81 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSPSSP
Sbjct: 1679 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP 1738
Query: 329 QFSPSTGYSPSQPGYSPSSTS 267
Q Y+ S P Y+PS+TS
Sbjct: 1739 Q------YTASSPSYTPSATS 1753
Score = 89.0 bits (219), Expect = 2e-16
Identities = 49/76 (64%), Positives = 56/76 (73%), Gaps = 3/76 (3%)
Frame = -3
Query: 473 YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYS 303
YS SPNY SPTSPSYSPTSPSYS +S YSP+SP S SP YSP+SP +SP S YS
Sbjct: 1621 YSSMSPNYNYSPTSPSYSPTSPSYSHTS--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1678
Query: 302 PSQPGYSPSSTSQYTP 255
P+ P YSP+S S Y+P
Sbjct: 1679 PTSPSYSPTSPS-YSP 1693
Score = 81.3 bits (199), Expect = 3e-14
Identities = 47/99 (47%), Positives = 56/99 (56%), Gaps = 21/99 (21%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSS-------------PTYSPSSPYNSGV---- 357
P+SP SP YSPTSP YSP++ SYSPSS +YSPSSP S
Sbjct: 1762 PTSPSLAVSPTYSPTSPMYSPSNASYSPSSVQHTPNAGVTQYNQSYSPSSPVYSPTNFSL 1821
Query: 356 -SPDYSPSSPQFSPSTG---YSPSQPGYSPSSTSQYTPQ 252
SP YSP+SP +SP G YSPS P YSP+S + P+
Sbjct: 1822 ASPRYSPTSPTYSPGVGSPNYSPSSPSYSPTSPNYSGPE 1860
Score = 80.9 bits (198), Expect = 4e-14
Identities = 48/86 (55%), Positives = 57/86 (66%), Gaps = 13/86 (15%)
Frame = -3
Query: 473 YSPTSPNYSPT----------SPSY--SPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
YSPTSP YS T SP+Y SPTSPSYSP+SP+YS +S S SP YSP+SP
Sbjct: 1604 YSPTSPQYSATQQNTPKYSSMSPNYNYSPTSPSYSPTSPSYSHTS--YSPTSPSYSPTSP 1661
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1662 SYSPTSPSYSPTSPSYSPTSPS-YSP 1686
Score = 58.5 bits (140), Expect = 2e-07
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Frame = -3
Query: 482 SSPYSPT----SPNYS-PTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 318
+SPY P+ SPNY+ P+SP + SPS +P++ YSP+SP S + +P SP
Sbjct: 1570 TSPYVPSPNSMSPNYNYPSSPQFGSMSPSMTPTN--YSPTSPQYSATQQN-TPKYSSMSP 1626
Query: 317 STGYSPSQPGYSPSSTS 267
+ YSP+ P YSP+S S
Sbjct: 1627 NYNYSPTSPSYSPTSPS 1643
[94][TOP]
>UniRef100_UPI000151A8B3 hypothetical protein PGUG_01105 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151A8B3
Length = 1018
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 835 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 894
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 895 SYSPTSPSYSPTSPS-YSP 912
Score = 109 bits (273), Expect = 8e-23
Identities = 53/77 (68%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 816 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 875
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 876 SPTSPSYSPTSPS-YSP 891
Score = 107 bits (268), Expect = 3e-22
Identities = 51/72 (70%), Positives = 60/72 (83%), Gaps = 2/72 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 842 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 901
Query: 311 GYSPSQPGYSPS 276
YSP+ P YSP+
Sbjct: 902 SYSPTSPSYSPT 913
Score = 103 bits (258), Expect = 5e-21
Identities = 51/77 (66%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S Y TSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 809 SPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 868
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 869 SPTSPSYSPTSPS-YSP 884
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 821 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 880
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 881 SYSPTSPSYSPTSPSYSPTSPS-YSP 905
Score = 97.1 bits (240), Expect = 6e-19
Identities = 46/69 (66%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP+
Sbjct: 856 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT-- 913
Query: 308 YSPSQPGYS 282
++ QP +S
Sbjct: 914 FAKLQPNFS 922
Score = 96.3 bits (238), Expect = 9e-19
Identities = 47/77 (61%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S Y SP Y TSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 802 SPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 861
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 862 SPTSPSYSPTSPS-YSP 877
Score = 90.9 bits (224), Expect = 4e-17
Identities = 46/80 (57%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P+SP Y TSP Y SP Y TSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 792 PTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 851
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 852 PSYSPTSPSYSPTSPS-YSP 870
Score = 85.1 bits (209), Expect = 2e-15
Identities = 46/79 (58%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP SPTSP Y TSP+Y SP Y +SPTYSP+SP S SP YSP+SP +SP S
Sbjct: 787 PGSP-SPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSP 845
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 846 SYSPTSPSYSPTSPS-YSP 863
[95][TOP]
>UniRef100_C3ZES3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
RepID=C3ZES3_BRAFL
Length = 1934
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP SPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1624 PTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1684 SYSPTSPSYSPTSPS-YSP 1701
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1704
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1705 SYSPTSPSYSPTSPS-YSP 1722
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1725
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1726 SYSPTSPSYSPTSPS-YSP 1743
Score = 109 bits (273), Expect = 8e-23
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1746
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1747 NYTPTSPKYSPTSPS-YSP 1764
Score = 108 bits (270), Expect = 2e-22
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSP SP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1617 PTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1676
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1677 SYSPTSPSYSPTSPS-YSP 1694
Score = 108 bits (269), Expect = 2e-22
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSP SP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1610 PQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1669
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1670 SYSPTSPSYSPTSPS-YSP 1687
Score = 108 bits (269), Expect = 2e-22
Identities = 52/78 (66%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP + SP YSP+SP +SP S
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSP 1767
Query: 311 GYSPSQPGYSPSSTSQYT 258
YSP+ P YSP+ S T
Sbjct: 1768 SYSPASPSYSPTILSNLT 1785
Score = 103 bits (257), Expect = 6e-21
Identities = 51/89 (57%), Positives = 63/89 (70%), Gaps = 5/89 (5%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ---FSP 318
P+SP YSP SP Y+PTSP YSPTSPSY+P +P YSP+SP S SP YSP+SP+ +SP
Sbjct: 1845 PTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPTSPTYSPTSPKGSTYSP 1904
Query: 317 ST-GYSPSQPGYSPSSTSQYTPQTNDQDE 234
+T GYSP+ P YSP S Q ++DE
Sbjct: 1905 TTPGYSPASPTYSPESPESRATQEEEEDE 1933
Score = 103 bits (256), Expect = 8e-21
Identities = 52/80 (65%), Positives = 60/80 (75%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P SP +P SP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 102 bits (254), Expect = 1e-20
Identities = 54/97 (55%), Positives = 65/97 (67%), Gaps = 20/97 (20%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1722 PTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTIL 1781
Query: 314 -----------------TGYSPSQPGYSPSSTSQYTP 255
T YSPS P YSPSS +Y+P
Sbjct: 1782 SNLTQLQPHLTPVHSHVTQYSPSSPKYSPSS-PKYSP 1817
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1631 PASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1691 SYSPTSPSYSPTSPSYSPTSPS-YSP 1715
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1712 SYSPTSPSYSPTSPSYSPTSPS-YSP 1736
Score = 99.0 bits (245), Expect = 1e-19
Identities = 52/82 (63%), Positives = 65/82 (79%), Gaps = 5/82 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP++SP+
Sbjct: 1701 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPT-- 1758
Query: 308 YSPSQP----GYSPSSTSQYTP 255
SPS YSP+S S Y+P
Sbjct: 1759 -SPSYSPTSPSYSPASPS-YSP 1778
Score = 99.0 bits (245), Expect = 1e-19
Identities = 46/81 (56%), Positives = 61/81 (75%), Gaps = 3/81 (3%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S+ YSP SP+YSP++P Y+PTSP YSP+SPTY+P+SP S SP Y+P +P++SP S Y
Sbjct: 1826 SAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKY 1885
Query: 305 SPSQPGYSPSST--SQYTPQT 249
SP+ P YSP+S S Y+P T
Sbjct: 1886 SPTSPTYSPTSPKGSTYSPTT 1906
Score = 98.2 bits (243), Expect = 2e-19
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+SP
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1732
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P Y+P+S +Y+P
Sbjct: 1733 SYSPTSPSYSPTSPNYTPTS-PKYSP 1757
Score = 97.8 bits (242), Expect = 3e-19
Identities = 47/76 (61%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 297
YSP+SP YSP+SP YSPTSP+YSPSS YSP+SP S +P Y+P+SP++SP S Y+P+
Sbjct: 1801 YSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPT 1860
Query: 296 QPGYSPSSTSQYTPQT 249
P YSP+S S YTP T
Sbjct: 1861 SPKYSPTSPS-YTPDT 1875
Score = 97.4 bits (241), Expect = 4e-19
Identities = 47/79 (59%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP YSPTSP+YSP+S YSP+SP+YSPS+P + SP YSP+SP ++P S
Sbjct: 1803 PSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSP 1862
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P T +Y+P
Sbjct: 1863 KYSPTSPSYTP-DTPKYSP 1880
Score = 97.4 bits (241), Expect = 4e-19
Identities = 48/79 (60%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP YSP+S YSP SPSYSPS+P Y+P+SP S SP Y+P+SP++SP S
Sbjct: 1810 PSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSP 1869
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P P YSP+S +Y+P
Sbjct: 1870 SYTPDTPKYSPTS-PKYSP 1887
Score = 96.3 bits (238), Expect = 9e-19
Identities = 53/91 (58%), Positives = 68/91 (74%), Gaps = 14/91 (15%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS------------SPYNSGVSPDY 345
P+SP Y+PTSP YSPTSPSYSPTSPSYSP+SP+YSP+ +P +S V+ Y
Sbjct: 1743 PTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTILSNLTQLQPHLTPVHSHVT-QY 1801
Query: 344 SPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 255
SPSSP++SPS+ YSP+ P YSPSS ++Y+P
Sbjct: 1802 SPSSPKYSPSSPKYSPTSPTYSPSS-AKYSP 1831
Score = 93.2 bits (230), Expect = 8e-18
Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPTSPS---------------YSPTSPSYSPSSPTYSPSSPYN 366
P+SPY P+ SP+YSP SP+ YSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PASPYIPSPGGPMSPSYSPASPAYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNY 1636
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 84.3 bits (207), Expect = 4e-15
Identities = 50/97 (51%), Positives = 60/97 (61%), Gaps = 20/97 (20%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPT--------SP----------SYSPTSPSYSPSSPTYSPSSPYNS 363
P+SP YSP SP+YSPT P YSP+SP YSPSSP YSP+SP S
Sbjct: 1764 PTSPSYSPASPSYSPTILSNLTQLQPHLTPVHSHVTQYSPSSPKYSPSSPKYSPTSPTYS 1823
Query: 362 GVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 255
S YSP+SP +SPST Y+P+ P YSP+S + YTP
Sbjct: 1824 PSSAKYSPASPSYSPSTPKYTPTSPKYSPASPT-YTP 1859
Score = 53.9 bits (128), Expect = 5e-06
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 13/90 (14%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSP 318
PS+ + + + SP++SPT S P SP P+SPY +SP YSP+SP + P
Sbjct: 1547 PSAASDASGMSPAGYSPAWSPTPGS--PGSP--GPASPYIPSPGGPMSPSYSPASPAYMP 1602
Query: 317 ---------STGYSPSQPGYSPSSTSQYTP 255
S GYSP+ P YSP+S S Y+P
Sbjct: 1603 RSPGGMTPQSPGYSPTSPSYSPTSPS-YSP 1631
[96][TOP]
>UniRef100_Q6CL79 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
RepID=Q6CL79_KLULA
Length = 1720
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1545 PTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1604
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1605 SYSPTSPSYSPTSPS-YSP 1622
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1552 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1611
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1612 SYSPTSPSYSPTSPS-YSP 1629
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1573 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1632
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1633 SYSPTSPSYSPTSPS-YSP 1650
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1594 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1653
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1654 SYSPTSPSYSPTSPS-YSP 1671
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1615 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1674
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1675 SYSPTSPSYSPTSPS-YSP 1692
Score = 108 bits (269), Expect = 2e-22
Identities = 54/78 (69%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
SSP +SPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1539 SSPGFSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1598
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1599 YSPTSPSYSPTSPS-YSP 1615
Score = 107 bits (266), Expect = 5e-22
Identities = 53/89 (59%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP
Sbjct: 1636 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP------S 1689
Query: 308 YSPSQPGYSPSSTSQYTPQTNDQDERGQD 222
YSP+ P YSP S S P+ + DE ++
Sbjct: 1690 YSPTSPQYSPGSYSPAEPKQQESDEEKKE 1718
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1559 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1618
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1619 SYSPTSPSYSPTSPSYSPTSPS-YSP 1643
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1580 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1639
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1640 SYSPTSPSYSPTSPSYSPTSPS-YSP 1664
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1601 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1660
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1661 SYSPTSPSYSPTSPSYSPTSPS-YSP 1685
[97][TOP]
>UniRef100_O94231 RNA polymerase II largest subunit (Fragment) n=1 Tax=Kluyveromyces
lactis RepID=O94231_KLULA
Length = 414
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 239 PTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 298
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 299 SYSPTSPSYSPTSPS-YSP 316
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 246 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 305
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 306 SYSPTSPSYSPTSPS-YSP 323
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 267 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 326
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 327 SYSPTSPSYSPTSPS-YSP 344
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 288 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 347
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 348 SYSPTSPSYSPTSPS-YSP 365
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 309 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 368
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 369 SYSPTSPSYSPTSPS-YSP 386
Score = 108 bits (269), Expect = 2e-22
Identities = 54/78 (69%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
SSP +SPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 233 SSPGFSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 292
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 293 YSPTSPSYSPTSPS-YSP 309
Score = 107 bits (266), Expect = 5e-22
Identities = 53/89 (59%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP
Sbjct: 330 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP------S 383
Query: 308 YSPSQPGYSPSSTSQYTPQTNDQDERGQD 222
YSP+ P YSP S S P+ + DE ++
Sbjct: 384 YSPTSPQYSPGSYSPAEPKQQESDEEKKE 412
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 253 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 312
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 313 SYSPTSPSYSPTSPSYSPTSPS-YSP 337
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 274 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 333
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 334 SYSPTSPSYSPTSPSYSPTSPS-YSP 358
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 295 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 354
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 355 SYSPTSPSYSPTSPSYSPTSPS-YSP 379
[98][TOP]
>UniRef100_C5E245 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5E245_LACTC
Length = 1740
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1546 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1605
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1606 SYSPTSPSYSPTSPS-YSP 1623
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1567 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1626
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1627 SYSPTSPSYSPTSPS-YSP 1644
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1588 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1647
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1648 SYSPTSPSYSPTSPS-YSP 1665
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1668
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1669 SYSPTSPSYSPTSPS-YSP 1686
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1630 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1689
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1690 SYSPTSPSYSPTSPS-YSP 1707
Score = 110 bits (275), Expect = 5e-23
Identities = 53/90 (58%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1651 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1710
Query: 311 GYSPSQPGYSPSSTSQYTPQTNDQDERGQD 222
YSP P YSP S + N+ + +
Sbjct: 1711 SYSPGSPSYSPGSPKKENDNDNNNNNNNNN 1740
Score = 106 bits (265), Expect = 7e-22
Identities = 52/77 (67%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S +SPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1541 SPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1600
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1601 SPTSPSYSPTSPS-YSP 1616
Score = 101 bits (252), Expect = 2e-20
Identities = 58/101 (57%), Positives = 69/101 (68%), Gaps = 13/101 (12%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1637 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1696
Query: 311 GYSPSQP-------GYSPSSTSQYTP----QTNDQDERGQD 222
YSP+ P YSP S S Y+P + ND D +
Sbjct: 1697 SYSPTSPSYSPTSPSYSPGSPS-YSPGSPKKENDNDNNNNN 1736
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1553 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1612
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1613 SYSPTSPSYSPTSPSYSPTSPS-YSP 1637
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1574 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1633
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1634 SYSPTSPSYSPTSPSYSPTSPS-YSP 1658
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1595 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1654
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1655 SYSPTSPSYSPTSPSYSPTSPS-YSP 1679
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1616 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1675
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1676 SYSPTSPSYSPTSPSYSPTSPS-YSP 1700
Score = 64.7 bits (156), Expect = 3e-09
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPT-SPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
SSP+S +PTSP + SP +SP+SP YSP+SP YSP+SP +SP S
Sbjct: 1521 SSPFSGYGD--APTSPGFGGVASPGFSPTSPAYSPTSP-------SYSPTSPSYSPTSPS 1571
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1572 YSPTSPSYSPTSPS-YSP 1588
[99][TOP]
>UniRef100_C4Y5N3 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4Y5N3_CLAL4
Length = 281
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 99 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 158
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 159 SYSPTSPSYSPTSPS-YSP 176
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 120 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 179
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 180 SYSPTSPSYSPTSPS-YSP 197
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 141 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 200
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 201 SYSPTSPSYSPTSPS-YSP 218
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 162 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 221
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 222 SYSPTSPSYSPTSPS-YSP 239
Score = 111 bits (277), Expect = 3e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 183 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 242
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 243 SYSPTSPQYSPTS-PQYSP 260
Score = 110 bits (275), Expect = 5e-23
Identities = 54/75 (72%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 197 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSP 256
Query: 311 GYSPSQPGYSPSSTS 267
YSP P YSP S S
Sbjct: 257 QYSPGSPSYSPRSPS 271
Score = 109 bits (273), Expect = 8e-23
Identities = 53/77 (68%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 80 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 139
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 140 SPTSPSYSPTSPS-YSP 155
Score = 103 bits (258), Expect = 5e-21
Identities = 51/77 (66%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S Y TSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 73 SPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 132
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 133 SPTSPSYSPTSPS-YSP 148
Score = 100 bits (250), Expect = 4e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP +YSP+SP S SP YSP+SP
Sbjct: 169 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 228
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S QY+P
Sbjct: 229 SYSPTSPSYSPTSPSYSPTS-PQYSP 253
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 85 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 144
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 145 SYSPTSPSYSPTSPSYSPTSPS-YSP 169
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 106 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 165
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 166 SYSPTSPSYSPTSPSYSPTSPS-YSP 190
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 127 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 186
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 187 SYSPTSPSYSPTSPSYSPTSPS-YSP 211
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 148 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 207
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 208 SYSPTSPSYSPTSPSYSPTSPS-YSP 232
Score = 97.1 bits (240), Expect = 6e-19
Identities = 50/88 (56%), Positives = 61/88 (69%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSPYS----------PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
P+SP+S TSP Y TSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+
Sbjct: 55 PTSPFSYGGASPAFGGATSPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 114
Query: 335 SPQFSP-STGYSPSQPGYSPSSTSQYTP 255
SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 115 SPSYSPTSPSYSPTSPSYSPTSPS-YSP 141
Score = 91.7 bits (226), Expect = 2e-17
Identities = 45/63 (71%), Positives = 51/63 (80%), Gaps = 4/63 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF---SP 318
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP SP + SP
Sbjct: 211 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPGSPSYSPRSP 270
Query: 317 STG 309
S G
Sbjct: 271 SYG 273
[100][TOP]
>UniRef100_C4VAM1 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01
RepID=C4VAM1_NOSCE
Length = 1612
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1474 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1533
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1534 SYSPTSPSYSPTSPS-YSP 1551
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1495 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1554
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1555 SYSPTSPSYSPTSPS-YSP 1572
Score = 110 bits (276), Expect = 4e-23
Identities = 53/90 (58%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1523 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSL 1582
Query: 311 GYSPSQPGYSPSSTSQYTPQTNDQDERGQD 222
YSP+ P YSP+ + + N++ R ++
Sbjct: 1583 SYSPTSPSYSPTGYKKDKDKKNERKRRHEN 1612
Score = 109 bits (273), Expect = 8e-23
Identities = 53/77 (68%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1455 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1514
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1515 SPTSPSYSPTSPS-YSP 1530
Score = 108 bits (271), Expect = 1e-22
Identities = 56/91 (61%), Positives = 70/91 (76%), Gaps = 4/91 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1516 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1575
Query: 311 GYSPSQPGYSPSSTSQYTP--QTNDQDERGQ 225
YSP+ YSP+S S Y+P D+D++ +
Sbjct: 1576 SYSPTSLSYSPTSPS-YSPTGYKKDKDKKNE 1605
Score = 103 bits (256), Expect = 8e-21
Identities = 50/77 (64%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S Y SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1448 SPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1507
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1508 SPTSPSYSPTSPS-YSP 1523
Score = 100 bits (250), Expect = 4e-20
Identities = 56/95 (58%), Positives = 67/95 (70%), Gaps = 9/95 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1502 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1561
Query: 311 GYSPSQP-------GYSPSSTSQYTPQTNDQDERG 228
YSP+ P YSP+S S Y+P + G
Sbjct: 1562 SYSPTSPSYSPTSPSYSPTSLS-YSPTSPSYSPTG 1595
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1460 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1519
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1520 SYSPTSPSYSPTSPSYSPTSPS-YSP 1544
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1481 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1540
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1541 SYSPTSPSYSPTSPSYSPTSPS-YSP 1565
Score = 95.1 bits (235), Expect = 2e-18
Identities = 47/76 (61%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYS 303
S +S SP+Y SPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S YS
Sbjct: 1442 SLFSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1501
Query: 302 PSQPGYSPSSTSQYTP 255
P+ P YSP+S S Y+P
Sbjct: 1502 PTSPSYSPTSPS-YSP 1516
Score = 86.7 bits (213), Expect = 7e-16
Identities = 44/76 (57%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYS 303
S YSP +S SPSY SPSYSP+SP+YSP+SP S SP YSP+SP +SP S YS
Sbjct: 1435 SKYSPKLSLFSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1494
Query: 302 PSQPGYSPSSTSQYTP 255
P+ P YSP+S S Y+P
Sbjct: 1495 PTSPSYSPTSPS-YSP 1509
Score = 65.1 bits (157), Expect = 2e-09
Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = -3
Query: 461 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGY 285
SP Y YSP +S SP+Y +SP S SP YSP+SP +SP S YSP+ P Y
Sbjct: 1427 SPAYLAEESKYSPKLSLFSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1486
Query: 284 SPSSTSQYTP 255
SP+S S Y+P
Sbjct: 1487 SPTSPS-YSP 1495
Score = 53.1 bits (126), Expect = 9e-06
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 297
YSP S + S +S ++SP +Y YSP S SP Y +SP +SP S YSP+
Sbjct: 1412 YSPVSESQSISSGNWSP---AYLAEESKYSPKLSLFSVGSPSYGSASPSYSPTSPSYSPT 1468
Query: 296 QPGYSPSSTSQYTP 255
P YSP+S S Y+P
Sbjct: 1469 SPSYSPTSPS-YSP 1481
[101][TOP]
>UniRef100_P36594 DNA-directed RNA polymerase II subunit rpb1 n=1
Tax=Schizosaccharomyces pombe RepID=RPB1_SCHPO
Length = 1752
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1629 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1688
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1689 SYSPTSPSYSPTSPS-YSP 1706
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1650 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1709
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1710 SYSPTSPSYSPTSPS-YSP 1727
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1671 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1730
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1731 SYSPTSPSYSPTSPS-YSP 1748
Score = 110 bits (275), Expect = 5e-23
Identities = 53/75 (70%), Positives = 62/75 (82%), Gaps = 2/75 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1678 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1737
Query: 311 GYSPSQPGYSPSSTS 267
YSP+ P YSP+S S
Sbjct: 1738 SYSPTSPSYSPTSPS 1752
Score = 109 bits (273), Expect = 8e-23
Identities = 53/77 (68%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1610 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1669
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1670 SPTSPSYSPTSPS-YSP 1685
Score = 108 bits (270), Expect = 2e-22
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYS TSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1587 PTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1646
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1647 SYSPTSPSYSPTSPS-YSP 1664
Score = 107 bits (268), Expect = 3e-22
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 327
PSSP Y P+SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP
Sbjct: 1560 PSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPS 1619
Query: 326 FSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPS-YSP 1643
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1615 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1674
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1675 SYSPTSPSYSPTSPSYSPTSPS-YSP 1699
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1636 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1695
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1696 SYSPTSPSYSPTSPSYSPTSPS-YSP 1720
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1657 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1716
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1717 SYSPTSPSYSPTSPSYSPTSPS-YSP 1741
Score = 98.6 bits (244), Expect = 2e-19
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YS +SP S SP YSP+SP +SP S
Sbjct: 1573 PSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSP 1632
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1633 SYSPTSPSYSPTSPSYSPTSPS-YSP 1657
Score = 92.8 bits (229), Expect = 1e-17
Identities = 47/77 (61%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS-PSTGY 306
S YSP+SP YS TSP+Y P+SPSYSP+SP+YSP+SP S SP YSP+SP +S S Y
Sbjct: 1555 SPSYSPSSPGYS-TSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSY 1613
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 1614 SPTSPSYSPTSPS-YSP 1629
Score = 72.4 bits (176), Expect = 1e-11
Identities = 42/80 (52%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Frame = -3
Query: 482 SSPYSPT-SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
+SP+S SP Y TSPSYSP+SP YS +SP Y PSSP S SP YSP+SP +SP+
Sbjct: 1540 TSPFSSAMSPGYGLTSPSYSPSSPGYS-TSPAYMPSSPSYSPTSPSYSPTSPSYSPT--- 1595
Query: 305 SPSQPGYSPS---STSQYTP 255
SPS SPS ++ Y+P
Sbjct: 1596 SPSYSPTSPSYSATSPSYSP 1615
Score = 61.6 bits (148), Expect = 3e-08
Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Frame = -3
Query: 482 SSPY----SP--TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 321
+SPY SP TSP S SP Y TSPSYSPSSP YS SP Y PSSP
Sbjct: 1528 ASPYKGVQSPGYTSPFSSAMSPGYGLTSPSYSPSSPGYS--------TSPAYMPSSPS-- 1577
Query: 320 PSTGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1578 ----YSPTSPSYSPTSPS-YSP 1594
[102][TOP]
>UniRef100_Q8SSC4 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Encephalitozoon
cuniculi RepID=RPB1_ENCCU
Length = 1599
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1468 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1527
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1528 SYSPTSPSYSPTSPS-YSP 1545
Score = 111 bits (278), Expect = 2e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1489 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1548
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1549 SYSPTSPSYSPTSPS-YSP 1566
Score = 106 bits (264), Expect = 9e-22
Identities = 51/73 (69%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
Frame = -3
Query: 470 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQ 294
SPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S YSP+
Sbjct: 1467 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1526
Query: 293 PGYSPSSTSQYTP 255
P YSP+S S Y+P
Sbjct: 1527 PSYSPTSPS-YSP 1538
Score = 103 bits (257), Expect = 6e-21
Identities = 54/93 (58%), Positives = 66/93 (70%), Gaps = 5/93 (5%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1496 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1555
Query: 311 GYSPSQP---GYSPSSTSQYTPQTNDQDERGQD 222
YSP+ P SPS + + +N + QD
Sbjct: 1556 SYSPTSPSYSPTSPSYSVSMSSFSNKNKSKNQD 1588
Score = 100 bits (249), Expect = 5e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1475 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1534
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1535 SYSPTSPSYSPTSPSYSPTSPS-YSP 1559
Score = 77.4 bits (189), Expect = 5e-13
Identities = 46/104 (44%), Positives = 61/104 (58%), Gaps = 27/104 (25%)
Frame = -3
Query: 485 PSSPY--SPTSPNYSPTSP------------------------SYSPTSPSYSPSSPTYS 384
P++P +P+S ++S +S SYSPTSPSYSP+SP+YS
Sbjct: 1429 PATPVISTPSSDSFSISSGNWSPTHLEMAYSRDLGERLSPTSPSYSPTSPSYSPTSPSYS 1488
Query: 383 PSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
P+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1489 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1531
Score = 60.1 bits (144), Expect = 8e-08
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 25/93 (26%)
Frame = -3
Query: 458 PNYSPTSPSYSPTSPSY------------------------SPSSPTYSPSSPYNSGVSP 351
PN T +P+S S+ SP+SP+YSP+SP S SP
Sbjct: 1426 PNEPATPVISTPSSDSFSISSGNWSPTHLEMAYSRDLGERLSPTSPSYSPTSPSYSPTSP 1485
Query: 350 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1486 SYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1517
[103][TOP]
>UniRef100_P16356 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
elegans RepID=RPB1_CAEEL
Length = 1852
Score = 111 bits (278), Expect = 2e-23
Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSPSSP +SPS+
Sbjct: 1607 PVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSP 1666
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS P YSP+S + Y+P
Sbjct: 1667 SYSPSSPRYSPTSPT-YSP 1684
Score = 110 bits (275), Expect = 5e-23
Identities = 57/88 (64%), Positives = 68/88 (77%), Gaps = 2/88 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSPSSP+YSPSSP S SP YSP+SP +SP S
Sbjct: 1628 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSP 1687
Query: 311 GYSPSQPGYSPSSTSQYTPQTNDQDERG 228
YSP+ P YSP+S + Y+P + + G
Sbjct: 1688 TYSPTSPTYSPTSPT-YSPTSPSYESGG 1714
Score = 108 bits (270), Expect = 2e-22
Identities = 52/78 (66%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
P++ SP SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1601 PAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPS 1660
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSPS P YSPSS +Y+P
Sbjct: 1661 YSPSSPSYSPSS-PRYSP 1677
Score = 108 bits (270), Expect = 2e-22
Identities = 52/78 (66%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
PSSP YSP+SP+YSP+SP YSPTSP+YSP+SPTYSP+SP S SP YSP+SP + G
Sbjct: 1656 PSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGG 1715
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSPS P YSPSS + Y+P
Sbjct: 1716 YSPSSPKYSPSSPT-YSP 1732
Score = 105 bits (262), Expect = 2e-21
Identities = 55/85 (64%), Positives = 66/85 (77%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPD------YSPSSPQ 327
PSSP YSP+SP YSPTSP+YSPTSP+YSP+SPTYSP+SP S SP YSPSSP+
Sbjct: 1663 PSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPK 1722
Query: 326 FSPST-GYSPSQPGYSPSSTSQYTP 255
+SPS+ YSP+ P YSP+S QY+P
Sbjct: 1723 YSPSSPTYSPTSPSYSPTS-PQYSP 1746
Score = 105 bits (261), Expect = 2e-21
Identities = 58/97 (59%), Positives = 66/97 (68%), Gaps = 18/97 (18%)
Frame = -3
Query: 485 PSSP--------YSPTSPNYSPTSP---------SYSPTSPSYSPSSPTYSPSSPYNSGV 357
PSSP YSPTSP+YSPTSP SYSPTSPSYSP+SP+YSP+SP S
Sbjct: 1577 PSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1636
Query: 356 SPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 249
SP YSP+SP +SP S YSPS P YSPSS S Y+P +
Sbjct: 1637 SPSYSPTSPSYSPTSPSYSPSSPSYSPSSPS-YSPSS 1672
Score = 103 bits (258), Expect = 5e-21
Identities = 52/80 (65%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
PSSP YSP+SP YSPTSPSYSPTSP YSP+SP YSPSSP + SP Y+P+SP+ S
Sbjct: 1718 PSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQ 1777
Query: 308 YSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSP+S S YTP +
Sbjct: 1778 YSPTSPTYSPTSPS-YTPSS 1796
Score = 102 bits (255), Expect = 1e-20
Identities = 55/87 (63%), Positives = 65/87 (74%), Gaps = 8/87 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT------YSPSSPYNSGVSPDYSPSSPQ 327
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP+ YSPSSP S SP YSP+SP
Sbjct: 1677 PTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPS 1736
Query: 326 FSP-STGYSPSQPGYSPSSTSQYTPQT 249
+SP S YSP+ P YSPSS + YTP +
Sbjct: 1737 YSPTSPQYSPTSPQYSPSSPT-YTPSS 1762
Score = 100 bits (248), Expect = 7e-20
Identities = 50/80 (62%), Positives = 60/80 (75%), Gaps = 2/80 (2%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
SSP YSPTSP YSPTSPSY+P+SP YSP+SPTY+PS G S YSP+SP +SPS+
Sbjct: 1774 SSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPGTSAQYSPTSPTYSPSSPT 1833
Query: 308 YSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSPSS + Y P +
Sbjct: 1834 YSPASPSYSPSSPT-YDPNS 1852
Score = 99.8 bits (247), Expect = 9e-20
Identities = 56/86 (65%), Positives = 66/86 (76%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSPSSP S SP YSPSSP
Sbjct: 1614 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSP 1673
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
++SP S YSP+ P YSP+S + Y+P
Sbjct: 1674 RYSPTSPTYSPTSPTYSPTSPT-YSP 1698
Score = 92.8 bits (229), Expect = 1e-17
Identities = 48/85 (56%), Positives = 59/85 (69%), Gaps = 10/85 (11%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPS---------SPTYSPSSPYNSGVSPDYSPSSPQFS 321
YSP+SP +S TSP YSPTSPSYSP+ SP+YSP+SP S SP YSP+SP +S
Sbjct: 1575 YSPSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYS 1634
Query: 320 P-STGYSPSQPGYSPSSTSQYTPQT 249
P S YSP+ P YSP+S S Y+P +
Sbjct: 1635 PTSPSYSPTSPSYSPTSPS-YSPSS 1658
Score = 92.0 bits (227), Expect = 2e-17
Identities = 53/98 (54%), Positives = 65/98 (66%), Gaps = 15/98 (15%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSP------SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS--- 336
PSSP Y+P+SP Y+PTSP YSPTSP+YSP+SP+Y+PSSP S SP Y+PS
Sbjct: 1753 PSSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPSE 1812
Query: 335 ----SPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQD 237
S Q+SP S YSPS P YSP+S S Y+P + D
Sbjct: 1813 QPGTSAQYSPTSPTYSPSSPTYSPASPS-YSPSSPTYD 1849
Score = 90.1 bits (222), Expect = 7e-17
Identities = 53/94 (56%), Positives = 63/94 (67%), Gaps = 12/94 (12%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSP----------SYSPSSPTYSPSSPYNSGVSPDYSP 339
PSSP YSPTSP+YSPTSP YSPTSP PSSPTY+P+SP SP YSP
Sbjct: 1725 PSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYT---PSSPTYNPTSPRGFS-SPQYSP 1780
Query: 338 SSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQ 240
+SP +SP S Y+PS P YSP+S + YTP ++Q
Sbjct: 1781 TSPTYSPTSPSYTPSSPQYSPTSPT-YTPSPSEQ 1813
Score = 88.6 bits (218), Expect = 2e-16
Identities = 50/87 (57%), Positives = 60/87 (68%), Gaps = 12/87 (13%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS------YSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 318
SP SPT SPTSPS YSP+SP YSPSSPTYSP+SP S SP YSP+SPQ+SP
Sbjct: 1697 SPTSPTY---SPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSP 1753
Query: 317 ST-GYSPSQPGYSPS-----STSQYTP 255
S+ Y+PS P Y+P+ S+ QY+P
Sbjct: 1754 SSPTYTPSSPTYNPTSPRGFSSPQYSP 1780
Score = 64.7 bits (156), Expect = 3e-09
Identities = 40/85 (47%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSP-----SYSPTSPSYSPSSP-TYSPSSPYNSGVSPDYSPSSPQFS 321
+SP++ +SP SP + SP +PSY SP YSPSSP S SP YSP+SP +S
Sbjct: 1540 ASPFN--EGGWSPASPGDPLGALSPRTPSYGGMSPGVYSPSSPQFSMTSPHYSPTSPSYS 1597
Query: 320 PST---GYSPSQPGYSPSSTSQYTP 255
P++ G SP P YSP+S S Y+P
Sbjct: 1598 PTSPAAGQSPVSPSYSPTSPS-YSP 1621
[104][TOP]
>UniRef100_B3RM26 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
RepID=B3RM26_TRIAD
Length = 1784
Score = 111 bits (277), Expect = 3e-23
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP++SP S
Sbjct: 1685 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSP 1744
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1745 SYSPTSPRYSPTSPS-YSP 1762
Score = 110 bits (276), Expect = 4e-23
Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP++SP S
Sbjct: 1671 PTSPKYSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPTSP 1730
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1731 SYSPTSPRYSPTSPS-YSP 1748
Score = 110 bits (275), Expect = 5e-23
Identities = 55/79 (69%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1643 PTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPKYSPTSPRYSPTSPSYSPTSPSYSPTSP 1702
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1703 SYSPTSPSYSPTSPS-YSP 1720
Score = 110 bits (274), Expect = 6e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP++SP S
Sbjct: 1622 PTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPKYSPTSP 1681
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1682 RYSPTSPSYSPTSPS-YSP 1699
Score = 108 bits (270), Expect = 2e-22
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1594 PTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSP 1653
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1654 RYSPTSPSYSPTSPS-YSP 1671
Score = 108 bits (269), Expect = 2e-22
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1615 PTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSP 1674
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1675 KYSPTSPRYSPTSPS-YSP 1692
Score = 107 bits (267), Expect = 4e-22
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1664 PTSPSYSPTSPKYSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1723
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 1724 RYSPTSPSYSPTS-PRYSP 1741
Score = 106 bits (265), Expect = 7e-22
Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1706 PTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSP 1765
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S Y+P
Sbjct: 1766 SYSPTSPSYSPTS-PDYSP 1783
Score = 105 bits (263), Expect = 1e-21
Identities = 52/76 (68%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYS 303
S YSPTSP+YSPTSP YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S YS
Sbjct: 1590 SKYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYS 1649
Query: 302 PSQPGYSPSSTSQYTP 255
P+ P YSP+S S Y+P
Sbjct: 1650 PTSPRYSPTSPS-YSP 1664
Score = 105 bits (261), Expect = 2e-21
Identities = 50/72 (69%), Positives = 58/72 (80%), Gaps = 2/72 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1713 PTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSP 1772
Query: 311 GYSPSQPGYSPS 276
YSP+ P YSP+
Sbjct: 1773 SYSPTSPDYSPN 1784
Score = 99.8 bits (247), Expect = 9e-20
Identities = 56/90 (62%), Positives = 66/90 (73%), Gaps = 9/90 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1692 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSP 1751
Query: 311 GYSPSQP-------GYSPSSTSQYTPQTND 243
YSP+ P YSP+S S Y+P + D
Sbjct: 1752 RYSPTSPSYSPTSPSYSPTSPS-YSPTSPD 1780
Score = 98.6 bits (244), Expect = 2e-19
Identities = 54/86 (62%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SP++SP S
Sbjct: 1629 PTSPRYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPKYSPTSPRYSPTSP 1688
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1689 SYSPTSPSYSPTSPSYSPTSPS-YSP 1713
Score = 97.4 bits (241), Expect = 4e-19
Identities = 54/86 (62%), Positives = 63/86 (73%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP-------SSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSP YSP+SP YSP +SP S SP YSP+SP
Sbjct: 1650 PTSPRYSPTSPSYSPTSPSYSPTSPKYSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSP 1709
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1710 SYSPTSPSYSPTSPRYSPTSPS-YSP 1734
Score = 96.3 bits (238), Expect = 9e-19
Identities = 52/83 (62%), Positives = 62/83 (74%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFS 321
P+SP YSPTSP+YSPTSP YSPTSPSYSP+SP YSP SP SP YSP+SP++S
Sbjct: 1601 PTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSP----TSPSYSPTSPRYS 1656
Query: 320 P-STGYSPSQPGYSPSSTSQYTP 255
P S YSP+ P YSP+S +Y+P
Sbjct: 1657 PTSPSYSPTSPSYSPTS-PKYSP 1678
Score = 63.2 bits (152), Expect = 9e-09
Identities = 45/98 (45%), Positives = 53/98 (54%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPY--SPTSPNYSPTSPS---------------YSPTSPSYS---PSSPTYSPSSPYN 366
PSSPY SPT + S YSPTSP P+SP YSP+SP
Sbjct: 1557 PSSPYMQSPTDITFYVAFQSIILTVESKLLTDFSKYSPTSP---SYSPTSPRYSPTSPSY 1613
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1614 SPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPS-YSP 1650
[105][TOP]
>UniRef100_UPI0000E12351 Os05g0151000 n=1 Tax=Oryza sativa Japonica Group RepID=UPI0000E12351
Length = 2085
Score = 110 bits (276), Expect = 4e-23
Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
PS YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S S YSP+SP +SP S G
Sbjct: 1697 PSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPG 1756
Query: 308 YSPSQPGYSPSSTS------QYTP 255
YSP+ P YSPSS S +YTP
Sbjct: 1757 YSPTSPSYSPSSPSYNPSSVKYTP 1780
Score = 107 bits (268), Expect = 3e-22
Identities = 56/83 (67%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
Frame = -3
Query: 485 PSSP-YSPTSP--NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP- 318
P+SP YSPTSP NYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+S +SP
Sbjct: 1687 PTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPT 1746
Query: 317 STGYSPSQPGYSPSSTSQYTPQT 249
S YSP+ PGYSP+S S Y+P +
Sbjct: 1747 SPAYSPTSPGYSPTSPS-YSPSS 1768
Score = 103 bits (258), Expect = 5e-21
Identities = 51/85 (60%), Positives = 62/85 (72%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSPSYSPTS +YSP+SP YSP+SP S SP YSPSSP ++PS+
Sbjct: 1717 PTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSV 1776
Query: 311 ------GYSPSQPGYSPSSTSQYTP 255
YSPS P Y S++ Y+P
Sbjct: 1777 KYTPSHAYSPSSPNYYSSTSPTYSP 1801
Score = 92.4 bits (228), Expect = 1e-17
Identities = 51/85 (60%), Positives = 63/85 (74%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGVSP--DYSPSSPQF- 324
P+SP YSPTSP Y+PTS +YSPTSPSY+P+SP +YSP+SP S SP YSP+SP +
Sbjct: 1634 PTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYS 1693
Query: 323 --SPSTGYSPSQPGYSPSSTSQYTP 255
SPS YSP+ P YSP+S S Y+P
Sbjct: 1694 PTSPSYNYSPTSPSYSPTSPS-YSP 1717
Score = 91.7 bits (226), Expect = 2e-17
Identities = 54/102 (52%), Positives = 67/102 (65%), Gaps = 22/102 (21%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSP--SYSPSSPTYSPSSP-----------------YN 366
P+SP Y+PTS YSPTSPSY+PTSP SYSP+SP+YSP+SP YN
Sbjct: 1641 PTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYN 1700
Query: 365 -SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTN 246
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P ++
Sbjct: 1701 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPTSS 1741
Score = 91.3 bits (225), Expect = 3e-17
Identities = 50/83 (60%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG-- 309
SS YSPTSP YSPTSP YSPTSPSYSPSSP+Y+PSS + S YSPSSP + ST
Sbjct: 1740 SSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTP-SHAYSPSSPNYYSSTSPT 1798
Query: 308 YSPSQPGYSPSSTSQYTPQTNDQ 240
YSP+ P YS S S Y+P ++
Sbjct: 1799 YSPTSPSYSQPSPS-YSPTRGEE 1820
Score = 89.4 bits (220), Expect = 1e-16
Identities = 46/86 (53%), Positives = 56/86 (65%), Gaps = 13/86 (15%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF---------- 324
YSP+SP YSPTS SYSPTSP YSP+SP Y+P+S S SP Y+P+SP +
Sbjct: 1618 YSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYS 1677
Query: 323 --SPSTGYSPSQPGYSPSSTS-QYTP 255
SPS YSP+ P YSP+S S Y+P
Sbjct: 1678 PTSPSYSYSPTSPSYSPTSPSYNYSP 1703
Score = 89.0 bits (219), Expect = 2e-16
Identities = 48/87 (55%), Positives = 58/87 (66%), Gaps = 11/87 (12%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSP-------SYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 324
S P+SPTSP YS TSP YSP+SP SYSP+SP YSP+SP + S YSP+SP +
Sbjct: 1601 SLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSY 1660
Query: 323 ---SPSTGYSPSQPGYSPSSTS-QYTP 255
SPS YSP+ P YSP+S S Y+P
Sbjct: 1661 NPTSPSYSYSPTSPSYSPTSPSYSYSP 1687
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/73 (64%), Positives = 54/73 (73%), Gaps = 9/73 (12%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPS------SPTYSPSSP-YNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSPSYSP+SPSY+PS S YSPSSP Y S SP YSP+SP
Sbjct: 1745 PTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSPNYYSSTSPTYSPTSP 1804
Query: 329 QFS-PSTGYSPSQ 294
+S PS YSP++
Sbjct: 1805 SYSQPSPSYSPTR 1817
Score = 85.9 bits (211), Expect = 1e-15
Identities = 45/78 (57%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S Y PTS +SPTSP YS TSP YSPSSP YSP+S S SP YSP+SP ++P S+ Y
Sbjct: 1594 SPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAY 1653
Query: 305 SPSQPGYSPSSTS-QYTP 255
SP+ P Y+P+S S Y+P
Sbjct: 1654 SPTSPSYNPTSPSYSYSP 1671
Score = 67.0 bits (162), Expect = 6e-10
Identities = 41/99 (41%), Positives = 51/99 (51%), Gaps = 22/99 (22%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSP---------------TYSPSSPYNSGVSP 351
PS P P +S Y+P SP YSP+SP +SP+SP S SP
Sbjct: 1557 PSPPVCTPGPGSFTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSP 1616
Query: 350 DYSPSSPQFSP-STGYSPSQPGYSPSS------TSQYTP 255
YSPSSP +SP S YSP+ P YSP+S +S Y+P
Sbjct: 1617 IYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSP 1655
Score = 63.9 bits (154), Expect = 5e-09
Identities = 34/61 (55%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSGVSPDYSPSSPQFSPST 312
P+SP YSP+SP+Y+P+S Y+P S +YSPSSP YS +SP S SP YS SP +SP+
Sbjct: 1759 PTSPSYSPSSPSYNPSSVKYTP-SHAYSPSSPNYYSSTSPTYSPTSPSYSQPSPSYSPTR 1817
Query: 311 G 309
G
Sbjct: 1818 G 1818
Score = 53.9 bits (128), Expect = 5e-06
Identities = 39/99 (39%), Positives = 50/99 (50%), Gaps = 26/99 (26%)
Frame = -3
Query: 473 YSPTSP--NYSPTSPS-YSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG-- 309
+SP S NY+P+S YSP+ P +P +++ SSPYN VSP YSP+SP P T
Sbjct: 1538 FSPVSSPGNYTPSSGGGYSPSPPVCTPGPGSFTSSSPYNP-VSPFYSPASPLSCPLTSPS 1596
Query: 308 ---------------------YSPSQPGYSPSSTSQYTP 255
YSPS P YSP+S S Y+P
Sbjct: 1597 YVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLS-YSP 1634
[106][TOP]
>UniRef100_Q5WMZ9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q5WMZ9_ORYSJ
Length = 1741
Score = 110 bits (276), Expect = 4e-23
Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
PS YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S S YSP+SP +SP S G
Sbjct: 1644 PSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPG 1703
Query: 308 YSPSQPGYSPSSTS------QYTP 255
YSP+ P YSPSS S +YTP
Sbjct: 1704 YSPTSPSYSPSSPSYNPSSVKYTP 1727
Score = 107 bits (268), Expect = 3e-22
Identities = 56/83 (67%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
Frame = -3
Query: 485 PSSP-YSPTSP--NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP- 318
P+SP YSPTSP NYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+S +SP
Sbjct: 1634 PTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPT 1693
Query: 317 STGYSPSQPGYSPSSTSQYTPQT 249
S YSP+ PGYSP+S S Y+P +
Sbjct: 1694 SPAYSPTSPGYSPTSPS-YSPSS 1715
Score = 100 bits (249), Expect = 5e-20
Identities = 51/77 (66%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSPSYSPTS +YSP+SP YSP+SP S SP YSPSSP ++PS+
Sbjct: 1664 PTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSV 1723
Query: 311 GYSPSQPGYSPSSTSQY 261
Y+PS YSPSS + Y
Sbjct: 1724 KYTPSH-AYSPSSPNYY 1739
Score = 92.4 bits (228), Expect = 1e-17
Identities = 51/85 (60%), Positives = 63/85 (74%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGVSP--DYSPSSPQF- 324
P+SP YSPTSP Y+PTS +YSPTSPSY+P+SP +YSP+SP S SP YSP+SP +
Sbjct: 1581 PTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYS 1640
Query: 323 --SPSTGYSPSQPGYSPSSTSQYTP 255
SPS YSP+ P YSP+S S Y+P
Sbjct: 1641 PTSPSYNYSPTSPSYSPTSPS-YSP 1664
Score = 91.7 bits (226), Expect = 2e-17
Identities = 54/102 (52%), Positives = 67/102 (65%), Gaps = 22/102 (21%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSP--SYSPSSPTYSPSSP-----------------YN 366
P+SP Y+PTS YSPTSPSY+PTSP SYSP+SP+YSP+SP YN
Sbjct: 1588 PTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYN 1647
Query: 365 -SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTN 246
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P ++
Sbjct: 1648 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPTSS 1688
Score = 89.4 bits (220), Expect = 1e-16
Identities = 46/86 (53%), Positives = 56/86 (65%), Gaps = 13/86 (15%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF---------- 324
YSP+SP YSPTS SYSPTSP YSP+SP Y+P+S S SP Y+P+SP +
Sbjct: 1565 YSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYS 1624
Query: 323 --SPSTGYSPSQPGYSPSSTS-QYTP 255
SPS YSP+ P YSP+S S Y+P
Sbjct: 1625 PTSPSYSYSPTSPSYSPTSPSYNYSP 1650
Score = 89.0 bits (219), Expect = 2e-16
Identities = 48/87 (55%), Positives = 58/87 (66%), Gaps = 11/87 (12%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSP-------SYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 324
S P+SPTSP YS TSP YSP+SP SYSP+SP YSP+SP + S YSP+SP +
Sbjct: 1548 SLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSY 1607
Query: 323 ---SPSTGYSPSQPGYSPSSTS-QYTP 255
SPS YSP+ P YSP+S S Y+P
Sbjct: 1608 NPTSPSYSYSPTSPSYSPTSPSYSYSP 1634
Score = 85.9 bits (211), Expect = 1e-15
Identities = 45/78 (57%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S Y PTS +SPTSP YS TSP YSPSSP YSP+S S SP YSP+SP ++P S+ Y
Sbjct: 1541 SPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAY 1600
Query: 305 SPSQPGYSPSSTS-QYTP 255
SP+ P Y+P+S S Y+P
Sbjct: 1601 SPTSPSYNPTSPSYSYSP 1618
Score = 67.0 bits (162), Expect = 6e-10
Identities = 41/99 (41%), Positives = 51/99 (51%), Gaps = 22/99 (22%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSP---------------TYSPSSPYNSGVSP 351
PS P P +S Y+P SP YSP+SP +SP+SP S SP
Sbjct: 1504 PSPPVCTPGPGSFTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSP 1563
Query: 350 DYSPSSPQFSP-STGYSPSQPGYSPSS------TSQYTP 255
YSPSSP +SP S YSP+ P YSP+S +S Y+P
Sbjct: 1564 IYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSP 1602
Score = 53.9 bits (128), Expect = 5e-06
Identities = 39/99 (39%), Positives = 50/99 (50%), Gaps = 26/99 (26%)
Frame = -3
Query: 473 YSPTSP--NYSPTSPS-YSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG-- 309
+SP S NY+P+S YSP+ P +P +++ SSPYN VSP YSP+SP P T
Sbjct: 1485 FSPVSSPGNYTPSSGGGYSPSPPVCTPGPGSFTSSSPYNP-VSPFYSPASPLSCPLTSPS 1543
Query: 308 ---------------------YSPSQPGYSPSSTSQYTP 255
YSPS P YSP+S S Y+P
Sbjct: 1544 YVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLS-YSP 1581
[107][TOP]
>UniRef100_Q0DKN9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q0DKN9_ORYSJ
Length = 1834
Score = 110 bits (276), Expect = 4e-23
Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
PS YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S S YSP+SP +SP S G
Sbjct: 1697 PSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPG 1756
Query: 308 YSPSQPGYSPSSTS------QYTP 255
YSP+ P YSPSS S +YTP
Sbjct: 1757 YSPTSPSYSPSSPSYNPSSVKYTP 1780
Score = 107 bits (268), Expect = 3e-22
Identities = 56/83 (67%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
Frame = -3
Query: 485 PSSP-YSPTSP--NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP- 318
P+SP YSPTSP NYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+S +SP
Sbjct: 1687 PTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPT 1746
Query: 317 STGYSPSQPGYSPSSTSQYTPQT 249
S YSP+ PGYSP+S S Y+P +
Sbjct: 1747 SPAYSPTSPGYSPTSPS-YSPSS 1768
Score = 103 bits (258), Expect = 5e-21
Identities = 51/85 (60%), Positives = 62/85 (72%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSPSYSPTS +YSP+SP YSP+SP S SP YSPSSP ++PS+
Sbjct: 1717 PTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSV 1776
Query: 311 ------GYSPSQPGYSPSSTSQYTP 255
YSPS P Y S++ Y+P
Sbjct: 1777 KYTPSHAYSPSSPNYYSSTSPTYSP 1801
Score = 93.2 bits (230), Expect = 8e-18
Identities = 51/89 (57%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG-- 309
SS YSPTSP YSPTSP YSPTSPSYSPSSP+Y+PSS + S YSPSSP + ST
Sbjct: 1740 SSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTP-SHAYSPSSPNYYSSTSPT 1798
Query: 308 YSPSQPGYSPSSTSQYTPQTNDQDERGQD 222
YSP+ P YS S S Y+P + ++E ++
Sbjct: 1799 YSPTSPSYSQPSPS-YSPTSRVEEEAHEE 1826
Score = 92.4 bits (228), Expect = 1e-17
Identities = 51/85 (60%), Positives = 63/85 (74%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGVSP--DYSPSSPQF- 324
P+SP YSPTSP Y+PTS +YSPTSPSY+P+SP +YSP+SP S SP YSP+SP +
Sbjct: 1634 PTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYS 1693
Query: 323 --SPSTGYSPSQPGYSPSSTSQYTP 255
SPS YSP+ P YSP+S S Y+P
Sbjct: 1694 PTSPSYNYSPTSPSYSPTSPS-YSP 1717
Score = 91.7 bits (226), Expect = 2e-17
Identities = 54/102 (52%), Positives = 67/102 (65%), Gaps = 22/102 (21%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSP--SYSPSSPTYSPSSP-----------------YN 366
P+SP Y+PTS YSPTSPSY+PTSP SYSP+SP+YSP+SP YN
Sbjct: 1641 PTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYN 1700
Query: 365 -SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTN 246
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P ++
Sbjct: 1701 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPTSS 1741
Score = 89.4 bits (220), Expect = 1e-16
Identities = 46/86 (53%), Positives = 56/86 (65%), Gaps = 13/86 (15%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF---------- 324
YSP+SP YSPTS SYSPTSP YSP+SP Y+P+S S SP Y+P+SP +
Sbjct: 1618 YSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYS 1677
Query: 323 --SPSTGYSPSQPGYSPSSTS-QYTP 255
SPS YSP+ P YSP+S S Y+P
Sbjct: 1678 PTSPSYSYSPTSPSYSPTSPSYNYSP 1703
Score = 89.0 bits (219), Expect = 2e-16
Identities = 48/87 (55%), Positives = 58/87 (66%), Gaps = 11/87 (12%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSP-------SYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 324
S P+SPTSP YS TSP YSP+SP SYSP+SP YSP+SP + S YSP+SP +
Sbjct: 1601 SLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSY 1660
Query: 323 ---SPSTGYSPSQPGYSPSSTS-QYTP 255
SPS YSP+ P YSP+S S Y+P
Sbjct: 1661 NPTSPSYSYSPTSPSYSPTSPSYSYSP 1687
Score = 87.4 bits (215), Expect = 4e-16
Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSPSYSP+SPSY+PSS Y+PS Y+ YS +SP +SP S
Sbjct: 1745 PTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSPNYYSSTSPTYSPTSP 1804
Query: 311 GYSPSQPGYSPSSTSQYTPQTNDQDE 234
YS P YSP+S + ++E
Sbjct: 1805 SYSQPSPSYSPTSRVEEEAHEEAEEE 1830
Score = 85.9 bits (211), Expect = 1e-15
Identities = 45/78 (57%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S Y PTS +SPTSP YS TSP YSPSSP YSP+S S SP YSP+SP ++P S+ Y
Sbjct: 1594 SPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAY 1653
Query: 305 SPSQPGYSPSSTS-QYTP 255
SP+ P Y+P+S S Y+P
Sbjct: 1654 SPTSPSYNPTSPSYSYSP 1671
Score = 67.0 bits (162), Expect = 6e-10
Identities = 41/99 (41%), Positives = 51/99 (51%), Gaps = 22/99 (22%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSP---------------TYSPSSPYNSGVSP 351
PS P P +S Y+P SP YSP+SP +SP+SP S SP
Sbjct: 1557 PSPPVCTPGPGSFTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSP 1616
Query: 350 DYSPSSPQFSP-STGYSPSQPGYSPSS------TSQYTP 255
YSPSSP +SP S YSP+ P YSP+S +S Y+P
Sbjct: 1617 IYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSP 1655
Score = 53.9 bits (128), Expect = 5e-06
Identities = 39/99 (39%), Positives = 50/99 (50%), Gaps = 26/99 (26%)
Frame = -3
Query: 473 YSPTSP--NYSPTSPS-YSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG-- 309
+SP S NY+P+S YSP+ P +P +++ SSPYN VSP YSP+SP P T
Sbjct: 1538 FSPVSSPGNYTPSSGGGYSPSPPVCTPGPGSFTSSSPYNP-VSPFYSPASPLSCPLTSPS 1596
Query: 308 ---------------------YSPSQPGYSPSSTSQYTP 255
YSPS P YSP+S S Y+P
Sbjct: 1597 YVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLS-YSP 1634
[108][TOP]
>UniRef100_P35074 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
briggsae RepID=RPB1_CAEBR
Length = 1853
Score = 110 bits (275), Expect = 5e-23
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSPSSP++SP S
Sbjct: 1625 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSP 1684
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1685 TYSPTSPTYSPTSPT-YSP 1702
Score = 109 bits (273), Expect = 8e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1611 PVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1670
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS P YSP+S + Y+P
Sbjct: 1671 SYSPSSPRYSPTSPT-YSP 1688
Score = 109 bits (273), Expect = 8e-23
Identities = 54/79 (68%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1618 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP 1677
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1678 RYSPTSPTYSPTSPT-YSP 1695
Score = 109 bits (273), Expect = 8e-23
Identities = 57/89 (64%), Positives = 66/89 (74%), Gaps = 12/89 (13%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSPSYSPTSPSYSPSSP YSP+SP S SP YSP+SP +SP++
Sbjct: 1646 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSP 1705
Query: 311 ----------GYSPSQPGYSPSSTSQYTP 255
GYSPS P YSPSS + Y+P
Sbjct: 1706 TYSPTSPSYEGYSPSSPKYSPSSPT-YSP 1733
Score = 105 bits (262), Expect = 2e-21
Identities = 53/82 (64%), Positives = 63/82 (76%), Gaps = 5/82 (6%)
Frame = -3
Query: 485 PSSP----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 318
P+SP SP SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP
Sbjct: 1601 PTSPAHHGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1660
Query: 317 -STGYSPSQPGYSPSSTSQYTP 255
S YSP+ P YSPSS +Y+P
Sbjct: 1661 TSPSYSPTSPSYSPSS-PRYSP 1681
Score = 105 bits (262), Expect = 2e-21
Identities = 54/82 (65%), Positives = 66/82 (80%), Gaps = 5/82 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPD---YSPSSPQFSP 318
P+SP YSP+SP YSPTSP+YSPTSP+YSP+SPTYSP+SP S SP YSPSSP++SP
Sbjct: 1667 PTSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSP 1726
Query: 317 ST-GYSPSQPGYSPSSTSQYTP 255
S+ YSP+ P YSP+S QY+P
Sbjct: 1727 SSPTYSPTSPSYSPTS-PQYSP 1747
Score = 104 bits (260), Expect = 3e-21
Identities = 55/87 (63%), Positives = 66/87 (75%), Gaps = 10/87 (11%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSY---SPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 318
P+SP YSPTSP YSPTSPSY SP+SP YSPSSPTYSP+SP S SP YSP+SPQ+SP
Sbjct: 1695 PTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSP 1754
Query: 317 ST-GYSPSQPGYSPS-----STSQYTP 255
S+ Y+PS P Y+P+ S+ QY+P
Sbjct: 1755 SSPTYTPSSPTYNPTSPRAFSSPQYSP 1781
Score = 104 bits (259), Expect = 3e-21
Identities = 52/80 (65%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
PSSP YSP+SP YSPTSPSYSPTSP YSP+SP YSPSSP + SP Y+P+SP+ S
Sbjct: 1719 PSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRAFSSPQ 1778
Query: 308 YSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSP+S S YTP +
Sbjct: 1779 YSPTSPTYSPTSPS-YTPSS 1797
Score = 103 bits (258), Expect = 5e-21
Identities = 55/84 (65%), Positives = 65/84 (77%), Gaps = 5/84 (5%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT---YSPSSPYNSGVSPDYSPSSPQFSP 318
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP+ YSPSSP S SP YSP+SP +SP
Sbjct: 1681 PTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPTYSPTSPSYSP 1740
Query: 317 -STGYSPSQPGYSPSSTSQYTPQT 249
S YSP+ P YSPSS + YTP +
Sbjct: 1741 TSPQYSPTSPQYSPSSPT-YTPSS 1763
Score = 102 bits (253), Expect = 2e-20
Identities = 52/79 (65%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
SSP YSPTSP YSPTSPSY+P+SP YSP+SPTY+PS G S YSPSSP +SPS+
Sbjct: 1775 SSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPADQPGTSNQYSPSSPTYSPSSPT 1834
Query: 308 YSPSQPGYSPSSTSQYTPQ 252
YSP+ P YSPSS + Y PQ
Sbjct: 1835 YSPASPSYSPSSPT-YDPQ 1852
Score = 101 bits (252), Expect = 2e-20
Identities = 53/89 (59%), Positives = 63/89 (70%), Gaps = 11/89 (12%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSP----------SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 333
S YSPTSP+YSPTSP SYSPTSPSYSP+SP+YSP+SP S SP YSP+S
Sbjct: 1589 SPHYSPTSPSYSPTSPAHHGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1648
Query: 332 PQFSP-STGYSPSQPGYSPSSTSQYTPQT 249
P +SP S YSP+ P YSP+S S Y+P +
Sbjct: 1649 PSYSPTSPSYSPTSPSYSPTSPS-YSPSS 1676
Score = 99.0 bits (245), Expect = 1e-19
Identities = 56/90 (62%), Positives = 66/90 (73%), Gaps = 11/90 (12%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSPSSP S SP YSP+SP
Sbjct: 1632 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSP 1691
Query: 329 QFSP-STGYSPSQPGYSPSSTSQ--YTPQT 249
+SP S YSP+ P YSP+S S Y+P +
Sbjct: 1692 TYSPTSPTYSPTSPTYSPTSPSYEGYSPSS 1721
Score = 98.6 bits (244), Expect = 2e-19
Identities = 53/89 (59%), Positives = 64/89 (71%), Gaps = 12/89 (13%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPT----------SPSYSPSSPTYSPSSPYNSGVSPDYSP 339
P+SP +S TSP+YSPTSPSYSPT SPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1580 PASPGFSMTSPHYSPTSPSYSPTSPAHHGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSP 1639
Query: 338 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1640 TSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1667
Score = 92.4 bits (228), Expect = 1e-17
Identities = 53/98 (54%), Positives = 66/98 (67%), Gaps = 15/98 (15%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSP------SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS--- 336
PSSP Y+P+SP Y+PTSP YSPTSP+YSP+SP+Y+PSSP S SP Y+PS
Sbjct: 1754 PSSPTYTPSSPTYNPTSPRAFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPAD 1813
Query: 335 ----SPQFSPST-GYSPSQPGYSPSSTSQYTPQTNDQD 237
S Q+SPS+ YSPS P YSP+S S Y+P + D
Sbjct: 1814 QPGTSNQYSPSSPTYSPSSPTYSPASPS-YSPSSPTYD 1850
Score = 91.7 bits (226), Expect = 2e-17
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 11/84 (13%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPS----------SPTYSPSSPYNSGVSPDYSPSSPQF 324
YSP SP +S TSP YSPTSPSYSP+ SP+YSP+SP S SP YSP+SP +
Sbjct: 1578 YSPASPGFSMTSPHYSPTSPSYSPTSPAHHGQSPVSPSYSPTSPSYSPTSPSYSPTSPSY 1637
Query: 323 SP-STGYSPSQPGYSPSSTSQYTP 255
SP S YSP+ P YSP+S S Y+P
Sbjct: 1638 SPTSPSYSPTSPSYSPTSPS-YSP 1660
Score = 90.5 bits (223), Expect = 5e-17
Identities = 54/94 (57%), Positives = 63/94 (67%), Gaps = 12/94 (12%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSP----------SYSPSSPTYSPSSPYNSGVSPDYSP 339
PSSP YSPTSP+YSPTSP YSPTSP PSSPTY+P+SP + SP YSP
Sbjct: 1726 PSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYT---PSSPTYNPTSP-RAFSSPQYSP 1781
Query: 338 SSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQ 240
+SP +SP S Y+PS P YSP+S + YTP DQ
Sbjct: 1782 TSPTYSPTSPSYTPSSPQYSPTSPT-YTPSPADQ 1814
Score = 70.5 bits (171), Expect = 6e-11
Identities = 38/64 (59%), Positives = 43/64 (67%), Gaps = 8/64 (12%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSP-------TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
PSSP YSPTSP Y+P TS YSP+SP+YSPSSPTYSP+ SP YSPSSP
Sbjct: 1795 PSSPQYSPTSPTYTPSPADQPGTSNQYSPSSPTYSPSSPTYSPA-------SPSYSPSSP 1847
Query: 329 QFSP 318
+ P
Sbjct: 1848 TYDP 1851
Score = 62.8 bits (151), Expect = 1e-08
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSS 375
S+ YSP+SP YSP+SP+YSP SPSYSPSSPTY P +
Sbjct: 1818 SNQYSPSSPTYSPSSPTYSPASPSYSPSSPTYDPQN 1853
Score = 61.6 bits (148), Expect = 3e-08
Identities = 42/98 (42%), Positives = 55/98 (56%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSPYSPT-------SP----NYSPTSP-----SYSPTSPSYSPSSP-TYSPSSPYNSGV 357
PS+ +SP SP +SP SP + SP +P+Y SP YSP+SP S
Sbjct: 1529 PSAGFSPAGNLDGGASPFNEGGWSPASPGDPLGALSPRTPAYGGMSPGVYSPASPGFSMT 1588
Query: 356 SPDYSPSSPQFSPST----GYSPSQPGYSPSSTSQYTP 255
SP YSP+SP +SP++ G SP P YSP+S S Y+P
Sbjct: 1589 SPHYSPTSPSYSPTSPAHHGQSPVSPSYSPTSPS-YSP 1625
[109][TOP]
>UniRef100_C5LSN8 P35 antigen, putative (Fragment) n=1 Tax=Perkinsus marinus ATCC
50983 RepID=C5LSN8_9ALVE
Length = 170
Score = 110 bits (274), Expect = 6e-23
Identities = 54/93 (58%), Positives = 64/93 (68%), Gaps = 9/93 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 318
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP
Sbjct: 59 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPAYSPTSP 118
Query: 317 -----STGYSPSQPGYSPSSTSQYTPQTNDQDE 234
S YSP+ P YSP+S + Y P DE
Sbjct: 119 AYSPTSPAYSPTSPAYSPTSPAYYHPLVTSSDE 151
Score = 105 bits (262), Expect = 2e-21
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 3 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 62
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 63 AYSPTSPAYSPTSPA-YSP 80
Score = 105 bits (262), Expect = 2e-21
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 24 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 83
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 84 AYSPTSPAYSPTSPA-YSP 101
Score = 105 bits (262), Expect = 2e-21
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 45 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 104
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 105 SYSPTSPAYSPTSPA-YSP 122
Score = 102 bits (255), Expect = 1e-20
Identities = 49/74 (66%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 297
YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S YSP+
Sbjct: 1 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 60
Query: 296 QPGYSPSSTSQYTP 255
P YSP+S + Y+P
Sbjct: 61 SPAYSPTSPA-YSP 73
Score = 95.9 bits (237), Expect = 1e-18
Identities = 50/91 (54%), Positives = 60/91 (65%), Gaps = 18/91 (19%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP YSPTSP+YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP++
Sbjct: 80 PTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 139
Query: 311 ----------------GYSPSQPGYSPSSTS 267
YSP+ P YS +S S
Sbjct: 140 AYYHPLVTSSDEGPVVRYSPTSPAYSNTSPS 170
Score = 94.4 bits (233), Expect = 4e-18
Identities = 52/86 (60%), Positives = 63/86 (73%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP+YSPTSP+YS P+SP YSP+SP S SP YSP+SP
Sbjct: 10 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 69
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + Y+P
Sbjct: 70 AYSPTSPAYSPTSPAYSPTSPA-YSP 94
Score = 94.4 bits (233), Expect = 4e-18
Identities = 52/86 (60%), Positives = 63/86 (73%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP+YSPTSP+YS P+SP YSP+SP S SP YSP+SP
Sbjct: 31 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 90
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + Y+P
Sbjct: 91 AYSPTSPAYSPTSPSYSPTSPA-YSP 115
[110][TOP]
>UniRef100_B6AG69 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
RepID=B6AG69_9CRYT
Length = 1927
Score = 110 bits (274), Expect = 6e-23
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP+YSPTSP YSP+SP YSP+SP+ S SP+YSP+SP +SP S
Sbjct: 1736 PTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSP 1795
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS P YSP+S S Y P
Sbjct: 1796 NYSPSSPHYSPTSPS-YNP 1813
Score = 109 bits (273), Expect = 8e-23
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSP+YSPTSP YSP+SP YSPSSP+ S SP Y+P+SP +SPS+
Sbjct: 1764 PTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPSSPHYSPTSPSYNPASPNYSPSSP 1823
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSPSS QY P
Sbjct: 1824 HYNPASPNYSPSS-PQYNP 1841
Score = 109 bits (273), Expect = 8e-23
Identities = 52/81 (64%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
P+SP YSPTSPNYSP+SP YSPTSPSY+P+SP YSPSSP+ + SP+YSPSSPQ++P+
Sbjct: 1785 PTSPHYSPTSPNYSPSSPHYSPTSPSYNPASPNYSPSSPHYNPASPNYSPSSPQYNPALP 1844
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSPS P Y+P+S + Y+P +
Sbjct: 1845 NYSPSSPQYNPTSPN-YSPSS 1864
Score = 109 bits (272), Expect = 1e-22
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP+YSPTSP YSP+SP YSP+SP+ S SP+YSPSSP +SP S
Sbjct: 1750 PTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPSSPHYSPTSP 1809
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSPSS Y P
Sbjct: 1810 SYNPASPNYSPSS-PHYNP 1827
Score = 108 bits (270), Expect = 2e-22
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSP YSPTSP YSP+SP YSP+SP+ S SP+YSP+SP +SP S
Sbjct: 1708 PTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSP 1767
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1768 NYSPTSPHYSPTSPN-YSP 1785
Score = 108 bits (269), Expect = 2e-22
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSPNYSPTSP+YSPTSP+YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1694 PLSPNYSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1753
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1754 NYSPTSPHYSPTSPN-YSP 1771
Score = 108 bits (269), Expect = 2e-22
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSP+YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1701 PTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSP 1760
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S Y+P
Sbjct: 1761 HYSPTSPNYSPTS-PHYSP 1778
Score = 107 bits (268), Expect = 3e-22
Identities = 52/81 (64%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP+YSP+SP +SP S
Sbjct: 1722 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSP 1781
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSP+S + Y+P +
Sbjct: 1782 NYSPTSPHYSPTSPN-YSPSS 1801
Score = 107 bits (266), Expect = 5e-22
Identities = 52/81 (64%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSPNYSPTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1743 PTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPSSP 1802
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P Y+P+S + Y+P +
Sbjct: 1803 HYSPTSPSYNPASPN-YSPSS 1822
Score = 105 bits (263), Expect = 1e-21
Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1729 PTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSP 1788
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSPSS Y+P
Sbjct: 1789 HYSPTSPNYSPSS-PHYSP 1806
Score = 105 bits (262), Expect = 2e-21
Identities = 52/81 (64%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSPNYSPTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP ++P S
Sbjct: 1757 PTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPSSPHYSPTSPSYNPASP 1816
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSPS P Y+P+S + Y+P +
Sbjct: 1817 NYSPSSPHYNPASPN-YSPSS 1836
Score = 103 bits (258), Expect = 5e-21
Identities = 52/79 (65%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1715 PTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSP 1774
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S Y+P
Sbjct: 1775 HYSPTSPNYSPTS-PHYSP 1792
Score = 95.5 bits (236), Expect = 2e-18
Identities = 48/78 (61%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Frame = -3
Query: 482 SSPY-SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
SSP+ SPTSP P SP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1681 SSPFMSPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPH 1740
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1741 YSPTSPHYSPTSPN-YSP 1757
Score = 89.0 bits (219), Expect = 2e-16
Identities = 45/84 (53%), Positives = 57/84 (67%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSP+SP+Y+P SP+YSP+SP Y+P+ P YSPSSP + SP+YSPSSP + S G
Sbjct: 1813 PASPNYSPSSPHYNPASPNYSPSSPQYNPALPNYSPSSPQYNPTSPNYSPSSPNYVLSNG 1872
Query: 308 ------YSPSQPGYSPSSTSQYTP 255
YSPS P Y S + Y P
Sbjct: 1873 NIDSPQYSPSSPHYD-QSVAAYHP 1895
Score = 82.0 bits (201), Expect = 2e-14
Identities = 45/83 (54%), Positives = 54/83 (65%), Gaps = 7/83 (8%)
Frame = -3
Query: 482 SSPYSPTSPNYS------PTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 321
+S YSPTSP YS +SP SPTSP P SP YSP+SP S SP+YSP+SP +S
Sbjct: 1662 TSAYSPTSPVYSGDKDGDSSSPFMSPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYS 1721
Query: 320 P-STGYSPSQPGYSPSSTSQYTP 255
P S YSP+ P YSP+S Y+P
Sbjct: 1722 PTSPHYSPTSPHYSPTS-PHYSP 1743
Score = 73.6 bits (179), Expect = 7e-12
Identities = 40/84 (47%), Positives = 51/84 (60%), Gaps = 13/84 (15%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTY------------SPSSPYNSGVSPDY 345
PSSP Y+P PNYSP+SP Y+PTSP+YSPSSP Y SPSSP+ Y
Sbjct: 1834 PSSPQYNPALPNYSPSSPQYNPTSPNYSPSSPNYVLSNGNIDSPQYSPSSPHYDQSVAAY 1893
Query: 344 SPSSPQFSPSTGYSPSQPGYSPSS 273
P+SP ++ ST + + YSP+S
Sbjct: 1894 HPTSPSYT-STNMAAEEAEYSPTS 1916
Score = 66.6 bits (161), Expect = 8e-10
Identities = 44/114 (38%), Positives = 58/114 (50%), Gaps = 37/114 (32%)
Frame = -3
Query: 485 PSSPYSPTSP--NYSPTSPSYSPTSPSYSP--------------SSPTYSPSSPYNSG-- 360
P SP SPTSP +Y+PTSP Y+ SP+Y ++ YSP+SP SG
Sbjct: 1617 PYSPASPTSPLIDYTPTSPIYAVRSPAYGHETEERTKKRYKANIATSAYSPTSPVYSGDK 1676
Query: 359 ------------------VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP+YSP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1677 DGDSSSPFMSPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYSPTS-PHYSP 1729
[111][TOP]
>UniRef100_A8Q5I6 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
RepID=A8Q5I6_MALGO
Length = 1607
Score = 110 bits (274), Expect = 6e-23
Identities = 55/82 (67%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1502 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1561
Query: 311 GYSPSQPGYSPSSTSQYTPQTN 246
YSP+ P YSP+S QY+P N
Sbjct: 1562 QYSPTSPQYSPTS-PQYSPSGN 1582
Score = 108 bits (270), Expect = 2e-22
Identities = 54/79 (68%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1481 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1540
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1541 QYSPTSPQYSPTS-PQYSP 1558
Score = 105 bits (263), Expect = 1e-21
Identities = 51/74 (68%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 297
YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SP S YSP+
Sbjct: 1479 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1538
Query: 296 QPGYSPSSTSQYTP 255
P YSP+S QY+P
Sbjct: 1539 SPQYSPTS-PQYSP 1551
Score = 99.4 bits (246), Expect = 1e-19
Identities = 54/92 (58%), Positives = 62/92 (67%), Gaps = 15/92 (16%)
Frame = -3
Query: 485 PSSP-YSPTSP-------------NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPD 348
P+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP
Sbjct: 1454 PTSPQYSPTSPAGPRGRRLGASGPKYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQ 1513
Query: 347 YSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1514 YSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1544
Score = 97.8 bits (242), Expect = 3e-19
Identities = 55/95 (57%), Positives = 64/95 (67%), Gaps = 9/95 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP YSPTSP YS P+SP YSP+SP S SP YSP+SP
Sbjct: 1488 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1547
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTPQTNDQDERG 228
Q+SP S YSP+ P YSP+S QY+P + G
Sbjct: 1548 QYSPTSPQYSPTSPQYSPTS-PQYSPTSPQYSPSG 1581
Score = 95.1 bits (235), Expect = 2e-18
Identities = 51/90 (56%), Positives = 60/90 (66%), Gaps = 14/90 (15%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN-------------SGVSPDYS 342
+S SP SPNYSPTSP YSPTSP+YSP+SP YSP+SP S SP YS
Sbjct: 1428 TSRMSPASPNYSPTSPVYSPTSPAYSPTSPQYSPTSPAGPRGRRLGASGPKYSPTSPQYS 1487
Query: 341 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
P+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1488 PTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1516
Score = 94.4 bits (233), Expect = 4e-18
Identities = 47/72 (65%), Positives = 53/72 (73%), Gaps = 3/72 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SPS
Sbjct: 1523 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPSGN 1582
Query: 314 TGYSPSQPGYSP 279
G S + SP
Sbjct: 1583 VGASAASGAASP 1594
Score = 82.0 bits (201), Expect = 2e-14
Identities = 50/108 (46%), Positives = 61/108 (56%), Gaps = 33/108 (30%)
Frame = -3
Query: 479 SPYSP------TSPNYSPTSPSYSPTSP-------------SYSPSSPTYSPSSPYNSGV 357
SP SP TSP+YSPTSPSYSP+SP SP+SP YSP+SP S
Sbjct: 1389 SPTSPRIFAGATSPSYSPTSPSYSPSSPVIDASNARSTYTSRMSPASPNYSPTSPVYSPT 1448
Query: 356 SPDYSPSSPQFSPST--------------GYSPSQPGYSPSSTSQYTP 255
SP YSP+SPQ+SP++ YSP+ P YSP+S QY+P
Sbjct: 1449 SPAYSPTSPQYSPTSPAGPRGRRLGASGPKYSPTSPQYSPTS-PQYSP 1495
Score = 80.5 bits (197), Expect = 5e-14
Identities = 48/103 (46%), Positives = 59/103 (57%), Gaps = 27/103 (26%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSP-------------SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYS 342
S YSPTSP+YSP+SP SP SP+YSP+SP YSP+SP S SP YS
Sbjct: 1401 SPSYSPTSPSYSPSSPVIDASNARSTYTSRMSPASPNYSPTSPVYSPTSPAYSPTSPQYS 1460
Query: 341 PSS-------------PQFSP-STGYSPSQPGYSPSSTSQYTP 255
P+S P++SP S YSP+ P YSP+S QY+P
Sbjct: 1461 PTSPAGPRGRRLGASGPKYSPTSPQYSPTSPQYSPTS-PQYSP 1502
Score = 71.2 bits (173), Expect = 3e-11
Identities = 45/118 (38%), Positives = 56/118 (47%), Gaps = 47/118 (39%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYS---------------------------------PTSPSYS 405
P ++PTSP Y PTSP+Y+ TSPSYS
Sbjct: 1346 PGYGFAPTSPGYVPTSPAYNATSPALGAMSPWVGAAGATSPAYSPTSPRIFAGATSPSYS 1405
Query: 404 PSSPTYSPSSPY-------------NSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 273
P+SP+YSPSSP S SP+YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1406 PTSPSYSPSSPVIDASNARSTYTSRMSPASPNYSPTSPVYSPTSPAYSPTSPQYSPTS 1463
[112][TOP]
>UniRef100_Q9AXN0 DNA-directed RNA polymerase n=1 Tax=Glaucosphaera vacuolata
RepID=Q9AXN0_9RHOD
Length = 1746
Score = 109 bits (273), Expect = 8e-23
Identities = 56/91 (61%), Positives = 67/91 (73%), Gaps = 12/91 (13%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSP+YSPTSP+YSP+SPTYSP+SP S SP YSP+SP +SPS+
Sbjct: 1608 PTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYSPTSPTYSPTSPTYSPTSPMYSPSSP 1667
Query: 311 ----------GYSPSQPGYSPSSTSQYTPQT 249
YSPS P YSPSS QY+P +
Sbjct: 1668 AMSPARAGGVSYSPSSPHYSPSS-PQYSPSS 1697
Score = 106 bits (265), Expect = 7e-22
Identities = 60/91 (65%), Positives = 68/91 (74%), Gaps = 12/91 (13%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS-----GV-----SPDYSP 339
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSPSSP S GV SP YSP
Sbjct: 1629 PTSPAYSPTSPTYSPTSPTYSPTSPTYSPTSPMYSPSSPAMSPARAGGVSYSPSSPHYSP 1688
Query: 338 SSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 249
SSPQ+SPS+ YSPS P YSPSS QY+P +
Sbjct: 1689 SSPQYSPSSPHYSPSSPHYSPSS-PQYSPSS 1718
Score = 105 bits (262), Expect = 2e-21
Identities = 54/80 (67%), Positives = 59/80 (73%), Gaps = 9/80 (11%)
Frame = -3
Query: 485 PSSP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
PSSP YSPTSP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP
Sbjct: 1587 PSSPGGVAASPGYSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYSPTSP 1646
Query: 329 QFSP-STGYSPSQPGYSPSS 273
+SP S YSP+ P YSPSS
Sbjct: 1647 TYSPTSPTYSPTSPMYSPSS 1666
Score = 102 bits (253), Expect = 2e-20
Identities = 57/91 (62%), Positives = 64/91 (70%), Gaps = 12/91 (13%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSP----------SYSPSSPTYSPSSPYNSGVSPDYSP 339
P+SP YSPTSP YSPTSP YSP+SP SYSPSSP YSPSSP S SP YSP
Sbjct: 1643 PTSPTYSPTSPTYSPTSPMYSPSSPAMSPARAGGVSYSPSSPHYSPSSPQYSPSSPHYSP 1702
Query: 338 SSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 249
SSP +SPS+ YSPS P YSPSS + Y+P +
Sbjct: 1703 SSPHYSPSSPQYSPSSPQYSPSSPA-YSPSS 1732
Score = 101 bits (251), Expect = 3e-20
Identities = 53/83 (63%), Positives = 61/83 (73%), Gaps = 12/83 (14%)
Frame = -3
Query: 485 PSSP-YSPTSP----------NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSP 339
P+SP YSP+SP +YSP+SP YSP+SP YSPSSP YSPSSP+ S SP YSP
Sbjct: 1657 PTSPMYSPSSPAMSPARAGGVSYSPSSPHYSPSSPQYSPSSPHYSPSSPHYSPSSPQYSP 1716
Query: 338 SSPQFSPST-GYSPSQPGYSPSS 273
SSPQ+SPS+ YSPS P YSPSS
Sbjct: 1717 SSPQYSPSSPAYSPSSPAYSPSS 1739
Score = 91.7 bits (226), Expect = 2e-17
Identities = 45/64 (70%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
PSSP YSP+SP YSP+SP YSP+SP YSPSSP YSPSSP S SP YSPSSP +SPS+
Sbjct: 1681 PSSPHYSPSSPQYSPSSPHYSPSSPHYSPSSPQYSPSSPQYSPSSPAYSPSSPAYSPSSP 1740
Query: 308 YSPS 297
PS
Sbjct: 1741 AHPS 1744
Score = 90.1 bits (222), Expect = 7e-17
Identities = 45/76 (59%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYS 303
SP SP+SP SP YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S YS
Sbjct: 1583 SPRSPSSPGGVAASPGYSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYS 1642
Query: 302 PSQPGYSPSSTSQYTP 255
P+ P YSP+S + Y+P
Sbjct: 1643 PTSPTYSPTSPT-YSP 1657
Score = 58.5 bits (140), Expect = 2e-07
Identities = 43/115 (37%), Positives = 54/115 (46%), Gaps = 38/115 (33%)
Frame = -3
Query: 485 PSSPYSPTSPNYSP--TSP------SYSPTSPSY-------------------------- 408
PS PY+P +SP SP S +PTSP+Y
Sbjct: 1523 PSYPYTPIGGQFSPFAASPYGDAAFSPTPTSPAYASPYGTAASPFNAMASPYSRAGNAFY 1582
Query: 407 ---SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
SPSSP +SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1583 SPRSPSSPGGVAASPGYSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPA-YSP 1636
[113][TOP]
>UniRef100_A4S3M0 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S3M0_OSTLU
Length = 1646
Score = 109 bits (272), Expect = 1e-22
Identities = 53/86 (61%), Positives = 68/86 (79%), Gaps = 2/86 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1560 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1619
Query: 311 GYSPSQPGYSPSSTSQYTPQTNDQDE 234
YSP+ P YSP+S + Y+P+ +++E
Sbjct: 1620 AYSPTSPAYSPTSPA-YSPKEEEENE 1644
Score = 105 bits (262), Expect = 2e-21
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1525 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1584
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1585 AYSPTSPAYSPTSPA-YSP 1602
Score = 105 bits (262), Expect = 2e-21
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1546 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1605
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1606 AYSPTSPAYSPTSPA-YSP 1623
Score = 102 bits (255), Expect = 1e-20
Identities = 49/74 (66%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 297
YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S YSP+
Sbjct: 1523 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1582
Query: 296 QPGYSPSSTSQYTP 255
P YSP+S + Y+P
Sbjct: 1583 SPAYSPTSPA-YSP 1595
Score = 94.4 bits (233), Expect = 4e-18
Identities = 52/86 (60%), Positives = 63/86 (73%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP+YSPTSP+YS P+SP YSP+SP S SP YSP+SP
Sbjct: 1532 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1591
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + Y+P
Sbjct: 1592 AYSPTSPAYSPTSPAYSPTSPA-YSP 1616
[114][TOP]
>UniRef100_Q7Q3C6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7Q3C6_ANOGA
Length = 1878
Score = 108 bits (271), Expect = 1e-22
Identities = 54/79 (68%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP +SPTSP+YSP+SPSYSPTSPSYSP+SP+YSP+SP + V+P YSPSSP +SP S
Sbjct: 1667 PSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSPNYSPTSP 1726
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSPSS +Y+P
Sbjct: 1727 HYSPASPSYSPSS-PKYSP 1744
Score = 107 bits (266), Expect = 5e-22
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSP+SP +SPTSPSYSPSSP+YSP+SP S SP YSP+SP F+P T
Sbjct: 1653 PTSPSYSPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTP 1712
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS P YSP+S Y+P
Sbjct: 1713 SYSPSSPNYSPTS-PHYSP 1730
Score = 102 bits (253), Expect = 2e-20
Identities = 50/79 (63%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP+++P +PSYSPSSP YSP+SP+ S SP YSPSSP++SP S
Sbjct: 1688 PTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPSYSPSSPKYSPTSP 1747
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y S YTP
Sbjct: 1748 SYSPTSPSYIGS--PHYTP 1764
Score = 101 bits (251), Expect = 3e-20
Identities = 49/81 (60%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSP+SP +SPTSPSYSP+SPSYSP+SP+YSP+SP S SP+++P +P +SPS+
Sbjct: 1660 PTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSP 1719
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSP+S S Y+P +
Sbjct: 1720 NYSPTSPHYSPASPS-YSPSS 1739
Score = 97.4 bits (241), Expect = 4e-19
Identities = 50/86 (58%), Positives = 59/86 (68%), Gaps = 7/86 (8%)
Frame = -3
Query: 485 PSSPYSPTS------PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 324
P SP PTS P YSPTSPSYSPTSPSYSPSSP +SP+SP S SP YSP+SP +
Sbjct: 1634 PMSPMHPTSASNFASPGYSPTSPSYSPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSPSY 1693
Query: 323 SP-STGYSPSQPGYSPSSTSQYTPQT 249
SP S YSP+ P ++P T Y+P +
Sbjct: 1694 SPTSPSYSPTSPNFTP-VTPSYSPSS 1718
Score = 95.9 bits (237), Expect = 1e-18
Identities = 51/124 (41%), Positives = 69/124 (55%), Gaps = 22/124 (17%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 318
P+SP YSPTSPN++P +PSYSP+SP+YSP+SP YSP+SP S SP YSP+SP +SP
Sbjct: 1695 PTSPSYSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPSYSPSSPKYSPTSPSYSPTSP 1754
Query: 317 ------------------STGYSPSQPGYSPSSTSQYTPQTNDQDERGQD*WRRSMRPFE 192
S YSP+ P YSPSS +++ G + ++ P+
Sbjct: 1755 SYIGSPHYTPASPQYGQASPNYSPTSPSYSPSSPQHSPGSSSNHYSIGSSSYSQTPAPYS 1814
Query: 191 ARRS 180
S
Sbjct: 1815 PNMS 1818
Score = 88.2 bits (217), Expect = 3e-16
Identities = 49/98 (50%), Positives = 59/98 (60%), Gaps = 19/98 (19%)
Frame = -3
Query: 485 PSSP-YSPTSP-----NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 324
PSSP Y+P SP +YSPTSP YSP SP YSP S YSPSSP + +YSP+SP +
Sbjct: 1573 PSSPNYAPNSPGGASPSYSPTSPGYSPPSPQYSPGSSNYSPSSPNIHSATQNYSPTSPSY 1632
Query: 323 SP-------------STGYSPSQPGYSPSSTSQYTPQT 249
SP S GYSP+ P YSP+S S Y+P +
Sbjct: 1633 SPMSPMHPTSASNFASPGYSPTSPSYSPTSPS-YSPSS 1669
Score = 82.4 bits (202), Expect = 1e-14
Identities = 57/149 (38%), Positives = 70/149 (46%), Gaps = 61/149 (40%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSY--------------------SPSSPTYSPSSPY 369
P+SP YSP+SP YSPTSPSYSPTSPSY SP+SP+YSPSSP
Sbjct: 1730 PASPSYSPSSPKYSPTSPSYSPTSPSYIGSPHYTPASPQYGQASPNYSPTSPSYSPSSPQ 1789
Query: 368 NSGVS-----------------------PDYSPSSPQFSP---------------STGYS 303
+S S YSPSSP++SP S YS
Sbjct: 1790 HSPGSSSNHYSIGSSSYSQTPAPYSPNMSSYSPSSPKYSPTSPVYTSSSPTYSPSSPAYS 1849
Query: 302 PSQPGYSPSSTSQ--YTPQTNDQDERGQD 222
P+ GYSPSS + Y+P + D+ +D
Sbjct: 1850 PTPQGYSPSSPASPTYSPTSPSYDDSNED 1878
Score = 77.4 bits (189), Expect = 5e-13
Identities = 43/91 (47%), Positives = 55/91 (60%), Gaps = 13/91 (14%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSP-----TYSPSSPYNSGVSPDYSPSSPQFSPS 315
SPY P+SP+ SP SYSP+SP+Y+P+SP +YSP+SP S SP YSP S +SPS
Sbjct: 1558 SPYPPSSPSMSP---SYSPSSPNYAPNSPGGASPSYSPTSPGYSPPSPQYSPGSSNYSPS 1614
Query: 314 T--------GYSPSQPGYSPSSTSQYTPQTN 246
+ YSP+ P YSP S T +N
Sbjct: 1615 SPNIHSATQNYSPTSPSYSPMSPMHPTSASN 1645
Score = 75.9 bits (185), Expect = 1e-12
Identities = 44/82 (53%), Positives = 50/82 (60%), Gaps = 7/82 (8%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS-PSTGYS 303
SP SP P+ SP PS SPSYSPSSP Y+P+SP G SP YSP+SP +S PS YS
Sbjct: 1549 SPSSP-GPSMSPYPPSSPSMSPSYSPSSPNYAPNSP--GGASPSYSPTSPGYSPPSPQYS 1605
Query: 302 PSQPGYSPSS------TSQYTP 255
P YSPSS T Y+P
Sbjct: 1606 PGSSNYSPSSPNIHSATQNYSP 1627
Score = 65.1 bits (157), Expect = 2e-09
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 15/96 (15%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPS---------YSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 333
P+S +P P++SP++ S +SP S S P+ SP P + +SP YSPSS
Sbjct: 1516 PASGMTPGGPSFSPSAQSDASGMSPSSWSPIRGSPSSPGPSMSPYPPSSPSMSPSYSPSS 1575
Query: 332 PQFSP------STGYSPSQPGYSPSSTSQYTPQTND 243
P ++P S YSP+ PGYSP S QY+P +++
Sbjct: 1576 PNYAPNSPGGASPSYSPTSPGYSPPS-PQYSPGSSN 1610
[115][TOP]
>UniRef100_Q5CUJ2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cryptosporidium parvum
Iowa II RepID=Q5CUJ2_CRYPV
Length = 1902
Score = 108 bits (271), Expect = 1e-22
Identities = 50/80 (62%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSPTSP YSPTSP YSPSSP YSP+SP S SP+Y+P+SP +SP++
Sbjct: 1768 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSH 1827
Query: 308 YSPSQPGYSPSSTSQYTPQT 249
YSP+ P Y+P+S + Y+P +
Sbjct: 1828 YSPTSPNYNPTSPN-YSPSS 1846
Score = 107 bits (268), Expect = 3e-22
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1733 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1792
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS P YSP+S QY+P
Sbjct: 1793 HYSPSSPHYSPTS-PQYSP 1810
Score = 105 bits (262), Expect = 2e-21
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SPS+
Sbjct: 1740 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSP 1799
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y P
Sbjct: 1800 HYSPTSPQYSPTSPN-YNP 1817
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1719 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1778
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSP+S Y+P +
Sbjct: 1779 HYSPTSPHYSPTS-PHYSPSS 1798
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1684 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1743
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S Y+P
Sbjct: 1744 HYSPTSPHYSPTS-PHYSP 1761
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1691 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1750
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S Y+P
Sbjct: 1751 HYSPTSPHYSPTS-PHYSP 1768
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1698 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1757
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S Y+P
Sbjct: 1758 HYSPTSPHYSPTS-PHYSP 1775
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1705 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1764
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S Y+P
Sbjct: 1765 HYSPTSPHYSPTS-PHYSP 1782
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1712 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1771
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S Y+P
Sbjct: 1772 HYSPTSPHYSPTS-PHYSP 1789
Score = 99.8 bits (247), Expect = 9e-20
Identities = 49/77 (63%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S SPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S Y
Sbjct: 1679 SPDLSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHY 1738
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S Y+P
Sbjct: 1739 SPTSPHYSPTS-PHYSP 1754
Score = 96.7 bits (239), Expect = 7e-19
Identities = 53/86 (61%), Positives = 63/86 (73%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSP YSPTSP YS P+SP YSP+SP+ S SP YSP+SP
Sbjct: 1747 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSP 1806
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
Q+SP S Y+P+ P YSP TS Y+P
Sbjct: 1807 QYSPTSPNYNPASPNYSP--TSHYSP 1830
Score = 94.0 bits (232), Expect = 5e-18
Identities = 49/88 (55%), Positives = 62/88 (70%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP------YNSGVSPDYSPSSPQ 327
P+SP YSPTSP+YSP+SP YSPTSP YSP+SP Y+P+SP + S SP+Y+P+SP
Sbjct: 1782 PTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSPN 1841
Query: 326 FSPST----GYSPSQPGYSPSSTSQYTP 255
+SPS+ + PGYSPSS QY P
Sbjct: 1842 YSPSSPNYISNNSGSPGYSPSS-PQYDP 1868
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/84 (58%), Positives = 58/84 (69%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSPY------SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 324
PSSP S SP+ SPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +
Sbjct: 1665 PSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHY 1724
Query: 323 SP-STGYSPSQPGYSPSSTSQYTP 255
SP S YSP+ P YSP+S Y+P
Sbjct: 1725 SPTSPHYSPTSPHYSPTS-PHYSP 1747
Score = 77.0 bits (188), Expect = 6e-13
Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 4/83 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTS +YSPTSP+Y+PTSP+YSPSSP Y + NSG SP YSPSSPQ+ P +
Sbjct: 1817 PASPNYSPTS-HYSPTSPNYNPTSPNYSPSSPNYISN---NSG-SPGYSPSSPQYDPIAV 1871
Query: 311 GYSPSQPGYSPSS--TSQYTPQT 249
P P YS ++Y+P +
Sbjct: 1872 ASVPRSPSYSVGKMVDAEYSPSS 1894
Score = 73.9 bits (180), Expect = 5e-12
Identities = 51/116 (43%), Positives = 59/116 (50%), Gaps = 39/116 (33%)
Frame = -3
Query: 485 PSSPYSPTSPN-------YSPTSPS-----YSPTSPSYSPSSPT---------------- 390
P SP SP SP YSP SPS Y+PTSP Y+ SSPT
Sbjct: 1598 PRSPMSPVSPGGIFSPVPYSPMSPSSPLMDYTPTSPIYAASSPTYNTEVSERARKKYKVN 1657
Query: 389 -----YSPSSPYN-----SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
YSPSSP N S +SPD SP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1658 NTLSSYSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1712
Score = 65.9 bits (159), Expect = 1e-09
Identities = 37/72 (51%), Positives = 45/72 (62%), Gaps = 20/72 (27%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSY---SPSSPTYSPSSP---------------YNSG 360
P+S YSPTSPNY+PTSP+YSP+SP+Y + SP YSPSSP Y+ G
Sbjct: 1824 PTSHYSPTSPNYNPTSPNYSPSSPNYISNNSGSPGYSPSSPQYDPIAVASVPRSPSYSVG 1883
Query: 359 --VSPDYSPSSP 330
V +YSPSSP
Sbjct: 1884 KMVDAEYSPSSP 1895
[116][TOP]
>UniRef100_Q5CH45 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium hominis
RepID=Q5CH45_CRYHO
Length = 1895
Score = 108 bits (271), Expect = 1e-22
Identities = 50/80 (62%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSPTSP YSPTSP YSPSSP YSP+SP S SP+Y+P+SP +SP++
Sbjct: 1761 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSH 1820
Query: 308 YSPSQPGYSPSSTSQYTPQT 249
YSP+ P Y+P+S + Y+P +
Sbjct: 1821 YSPTSPNYNPTSPN-YSPSS 1839
Score = 107 bits (268), Expect = 3e-22
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1726 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1785
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS P YSP+S QY+P
Sbjct: 1786 HYSPSSPHYSPTS-PQYSP 1803
Score = 105 bits (262), Expect = 2e-21
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SPS+
Sbjct: 1733 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSP 1792
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y P
Sbjct: 1793 HYSPTSPQYSPTSPN-YNP 1810
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1712 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1771
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
YSP+ P YSP+S Y+P +
Sbjct: 1772 HYSPTSPHYSPTS-PHYSPSS 1791
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1677 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1736
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S Y+P
Sbjct: 1737 HYSPTSPHYSPTS-PHYSP 1754
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1684 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1743
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S Y+P
Sbjct: 1744 HYSPTSPHYSPTS-PHYSP 1761
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1691 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1750
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S Y+P
Sbjct: 1751 HYSPTSPHYSPTS-PHYSP 1768
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1698 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1757
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S Y+P
Sbjct: 1758 HYSPTSPHYSPTS-PHYSP 1775
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1705 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1764
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S Y+P
Sbjct: 1765 HYSPTSPHYSPTS-PHYSP 1782
Score = 99.8 bits (247), Expect = 9e-20
Identities = 49/77 (63%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S SPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S Y
Sbjct: 1672 SPDLSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHY 1731
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S Y+P
Sbjct: 1732 SPTSPHYSPTS-PHYSP 1747
Score = 96.7 bits (239), Expect = 7e-19
Identities = 53/86 (61%), Positives = 63/86 (73%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSPTSP YSPTSP YS P+SP YSP+SP+ S SP YSP+SP
Sbjct: 1740 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSP 1799
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
Q+SP S Y+P+ P YSP TS Y+P
Sbjct: 1800 QYSPTSPNYNPASPNYSP--TSHYSP 1823
Score = 94.0 bits (232), Expect = 5e-18
Identities = 49/88 (55%), Positives = 62/88 (70%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP------YNSGVSPDYSPSSPQ 327
P+SP YSPTSP+YSP+SP YSPTSP YSP+SP Y+P+SP + S SP+Y+P+SP
Sbjct: 1775 PTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSPN 1834
Query: 326 FSPST----GYSPSQPGYSPSSTSQYTP 255
+SPS+ + PGYSPSS QY P
Sbjct: 1835 YSPSSPNYISNNSGSPGYSPSS-PQYDP 1861
Score = 92.0 bits (227), Expect = 2e-17
Identities = 49/84 (58%), Positives = 58/84 (69%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSPY------SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 324
PSSP S SP+ SPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +
Sbjct: 1658 PSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHY 1717
Query: 323 SP-STGYSPSQPGYSPSSTSQYTP 255
SP S YSP+ P YSP+S Y+P
Sbjct: 1718 SPTSPHYSPTSPHYSPTS-PHYSP 1740
Score = 77.0 bits (188), Expect = 6e-13
Identities = 46/83 (55%), Positives = 57/83 (68%), Gaps = 4/83 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTS +YSPTSP+Y+PTSP+YSPSSP Y + NSG SP YSPSSPQ+ P
Sbjct: 1810 PASPNYSPTS-HYSPTSPNYNPTSPNYSPSSPNYISN---NSG-SPGYSPSSPQYDPIAV 1864
Query: 308 YS-PSQPGYSPSS--TSQYTPQT 249
S P P YS ++Y+P +
Sbjct: 1865 TSVPRSPSYSVGKMVDAEYSPSS 1887
Score = 73.9 bits (180), Expect = 5e-12
Identities = 51/116 (43%), Positives = 59/116 (50%), Gaps = 39/116 (33%)
Frame = -3
Query: 485 PSSPYSPTSPN-------YSPTSPS-----YSPTSPSYSPSSPT---------------- 390
P SP SP SP YSP SPS Y+PTSP Y+ SSPT
Sbjct: 1591 PRSPMSPVSPGGIFSPVPYSPMSPSSPLMDYTPTSPIYAASSPTYNTEVSERARKKYKVN 1650
Query: 389 -----YSPSSPYN-----SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
YSPSSP N S +SPD SP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1651 NTLSSYSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1705
Score = 65.9 bits (159), Expect = 1e-09
Identities = 37/72 (51%), Positives = 45/72 (62%), Gaps = 20/72 (27%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSY---SPSSPTYSPSSP---------------YNSG 360
P+S YSPTSPNY+PTSP+YSP+SP+Y + SP YSPSSP Y+ G
Sbjct: 1817 PTSHYSPTSPNYNPTSPNYSPSSPNYISNNSGSPGYSPSSPQYDPIAVTSVPRSPSYSVG 1876
Query: 359 --VSPDYSPSSP 330
V +YSPSSP
Sbjct: 1877 KMVDAEYSPSSP 1888
[117][TOP]
>UniRef100_Q4QZ03 DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum tuberosum
RepID=Q4QZ03_SOLTU
Length = 361
Score = 107 bits (268), Expect = 3e-22
Identities = 55/79 (69%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S SP YSP+SP +SP S
Sbjct: 132 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 191
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ YSP+S S Y+P
Sbjct: 192 SYSPTSSSYSPTSPS-YSP 209
Score = 105 bits (263), Expect = 1e-21
Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 125 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 184
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S+S Y+P
Sbjct: 185 SYSPTSPSYSPTSSS-YSP 202
Score = 105 bits (263), Expect = 1e-21
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
P+SP YSPTSP YSPTSP+YSPT PSYSP+ P+YSP+SP S SP YSP+SP +SP+
Sbjct: 216 PTSPAYSPTSPAYSPTSPAYSPTLPSYSPTLPSYSPTSPSYSPTSPSYSPTSPSYSPTFP 275
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ PGYSP+S S Y+P
Sbjct: 276 AYSPTSPGYSPTSPS-YSP 293
Score = 104 bits (260), Expect = 3e-21
Identities = 54/79 (68%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSPTSP YSPTSPSYSPTSPSYSP+S +YSP+SP S SP YSP+SP +SP S
Sbjct: 167 PSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPTSPAYSPTSP 226
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+ S Y+P
Sbjct: 227 AYSPTSPAYSPTLPS-YSP 244
Score = 104 bits (260), Expect = 3e-21
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSYSPTS SYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 174 PTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPTSPAYSPTSPAYSPTSP 233
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+ S Y+P
Sbjct: 234 AYSPTLPSYSPTLPS-YSP 251
Score = 103 bits (256), Expect = 8e-21
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+S S SP YSP+SP +SP S
Sbjct: 160 PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPTSP 219
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 220 AYSPTSPAYSPTSPA-YSP 237
Score = 103 bits (256), Expect = 8e-21
Identities = 50/77 (64%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
SS YSPTSP+YSPTSP YSPTSP+YSP+SP YSP+SP S P YSP+ P +SP S Y
Sbjct: 197 SSSYSPTSPSYSPTSPIYSPTSPAYSPTSPAYSPTSPAYSPTLPSYSPTLPSYSPTSPSY 256
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S S Y+P
Sbjct: 257 SPTSPSYSPTSPS-YSP 272
Score = 102 bits (254), Expect = 1e-20
Identities = 52/81 (64%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
SSP YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S SP YSPSSP +SP S
Sbjct: 119 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 178
Query: 308 YSPSQPGYSPSSTSQYTPQTN 246
YSP+ P YSP+S S Y+P ++
Sbjct: 179 YSPTSPSYSPTSPS-YSPTSS 198
Score = 102 bits (254), Expect = 1e-20
Identities = 52/85 (61%), Positives = 64/85 (75%), Gaps = 6/85 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSPTSPSYSPT P+YSP+SP YSP+SP S SP YSP+SP ++PS
Sbjct: 251 PTSPSYSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSAR 310
Query: 308 YSPSQPGYSPSS-----TSQYTPQT 249
YSPS YSP+S +S Y+P +
Sbjct: 311 YSPSL-AYSPTSPKLSPSSPYSPSS 334
Score = 102 bits (253), Expect = 2e-20
Identities = 50/79 (63%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+ P YSPT P+YSPTSPSYSPTSPSYSP+SP+YSP+ P S SP YSP+SP +SP S
Sbjct: 237 PTLPSYSPTLPSYSPTSPSYSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPTSPSYSPTSP 296
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+PS ++Y+P
Sbjct: 297 SYSPTSPSYNPS--ARYSP 313
Score = 101 bits (252), Expect = 2e-20
Identities = 49/79 (62%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP YSP+SP YSPTSP+YSP+SP+YSP+SP S S YSP+SP +SP++
Sbjct: 153 PTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSP 212
Query: 308 -YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 213 IYSPTSPAYSPTSPA-YSP 230
Score = 98.2 bits (243), Expect = 2e-19
Identities = 51/85 (60%), Positives = 61/85 (71%), Gaps = 6/85 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN-----SGVSPDYSPSSPQF 324
P+ P YSPTSP YSPTSPSYSPTSPSYSP+SP+Y+PS+ Y+ S SP SPSSP
Sbjct: 272 PTFPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSARYSPSLAYSPTSPKLSPSSPYS 331
Query: 323 SPSTGYSPSQPGYSPSSTSQYTPQT 249
S YSP+ P YSP+S S Y+P +
Sbjct: 332 PSSPSYSPTSPSYSPTSPS-YSPSS 355
Score = 97.8 bits (242), Expect = 3e-19
Identities = 54/104 (51%), Positives = 63/104 (60%), Gaps = 27/104 (25%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF----- 324
P+ P YSPTSP+YSPTSPSYSPTSPSYSP+ P YSP+SP S SP YSP+SP +
Sbjct: 244 PTLPSYSPTSPSYSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPTSPSYSPTSPSYSPTSP 303
Query: 323 ---------------------SPSTGYSPSQPGYSPSSTSQYTP 255
SPS+ YSPS P YSP+S S Y+P
Sbjct: 304 SYNPSARYSPSLAYSPTSPKLSPSSPYSPSSPSYSPTSPS-YSP 346
Score = 96.7 bits (239), Expect = 7e-19
Identities = 53/84 (63%), Positives = 59/84 (70%), Gaps = 14/84 (16%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPS------------SPTYSPSSPYNSGVSPDY 345
P+SP YSPTSP+YSPTSPSYSPTSPSY+PS SP SPSSPY+ SP Y
Sbjct: 279 PTSPGYSPTSPSYSPTSPSYSPTSPSYNPSARYSPSLAYSPTSPKLSPSSPYSPS-SPSY 337
Query: 344 SPSSPQFSP-STGYSPSQPGYSPS 276
SP+SP +SP S YSPS P YSPS
Sbjct: 338 SPTSPSYSPTSPSYSPSSPTYSPS 361
Score = 94.0 bits (232), Expect = 5e-18
Identities = 53/86 (61%), Positives = 61/86 (70%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPT PSYSPT PSYSP+SP+YSP+SP S SP YSP+ P +SP S
Sbjct: 223 PTSPAYSPTSPAYSPTLPSYSPTLPSYSPTSPSYSPTSPSYSPTSPSYSPTFPAYSPTSP 282
Query: 311 GYSPSQP-------GYSPSSTSQYTP 255
GYSP+ P YSP+S S Y P
Sbjct: 283 GYSPTSPSYSPTSPSYSPTSPS-YNP 307
Score = 93.6 bits (231), Expect = 6e-18
Identities = 52/86 (60%), Positives = 62/86 (72%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSP-------TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSP TSPSYSPTSP YSP+SP YSP+SP S SP YSP+ P
Sbjct: 181 PTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPTSPAYSPTSPAYSPTSPAYSPTLP 240
Query: 329 QFSPS-TGYSPSQPGYSPSSTSQYTP 255
+SP+ YSP+ P YSP+S S Y+P
Sbjct: 241 SYSPTLPSYSPTSPSYSPTSPS-YSP 265
Score = 91.3 bits (225), Expect = 3e-17
Identities = 51/86 (59%), Positives = 61/86 (70%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP YSPTSP+YS P+SP YSP+SP S SP YSP+S
Sbjct: 139 PTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSS 198
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + Y+P
Sbjct: 199 SYSPTSPSYSPTSPIYSPTSPA-YSP 223
Score = 84.7 bits (208), Expect = 3e-15
Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
Frame = -3
Query: 452 YSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSP 279
+SPTS P YSP+SP YSPSSP YSP+SP S SP YSP+SP +SP S YSPS PGYSP
Sbjct: 115 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 174
Query: 278 SSTSQYTP 255
+S + Y+P
Sbjct: 175 TSPA-YSP 181
Score = 68.6 bits (166), Expect = 2e-10
Identities = 46/85 (54%), Positives = 54/85 (63%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSPYSP-TSPNYSPT--SPSYSPTS-PSYSPSSPTYSPSSPYNSG---VSPDYSPSSPQ 327
P+ SP T +SP ++SPTS P YSPSSP YSPSSP G SP YSP+SP
Sbjct: 94 PNMRMSPITDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSP---GYSPTSPGYSPTSPG 150
Query: 326 FSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S GYSP+ P YSPSS Y+P
Sbjct: 151 YSPTSPGYSPTSPTYSPSSPG-YSP 174
[118][TOP]
>UniRef100_C1EA31 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1EA31_9CHLO
Length = 1720
Score = 107 bits (268), Expect = 3e-22
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1613 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPTSP 1672
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1673 QYSPTSPQYSPTS-PQYSP 1690
Score = 107 bits (266), Expect = 5e-22
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1592 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1651
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S QY+P
Sbjct: 1652 AYSPTSPAYSPTS-PQYSP 1669
Score = 105 bits (263), Expect = 1e-21
Identities = 51/73 (69%), Positives = 60/73 (82%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1620 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPTSPQYSPTSP 1679
Query: 311 GYSPSQPGYSPSS 273
YSP+ P YSP+S
Sbjct: 1680 QYSPTSPQYSPTS 1692
Score = 105 bits (262), Expect = 2e-21
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1529 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1588
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1589 AYSPTSPAYSPTSPA-YSP 1606
Score = 105 bits (262), Expect = 2e-21
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1550 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1609
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1610 AYSPTSPAYSPTSPA-YSP 1627
Score = 105 bits (262), Expect = 2e-21
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1571 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1630
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1631 AYSPTSPAYSPTSPA-YSP 1648
Score = 103 bits (256), Expect = 8e-21
Identities = 50/77 (64%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1524 SPGYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1583
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S + Y+P
Sbjct: 1584 SPTSPAYSPTSPA-YSP 1599
Score = 100 bits (250), Expect = 4e-20
Identities = 52/88 (59%), Positives = 64/88 (72%), Gaps = 9/88 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1627 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPTSPQYSPTSPQYSPTSP 1686
Query: 311 GYSPSQPGYSPS-------STSQYTPQT 249
YSP+ G S + ++ QY+P T
Sbjct: 1687 QYSPTSLGLSDADAPTRSPTSPQYSPST 1714
Score = 94.4 bits (233), Expect = 4e-18
Identities = 52/86 (60%), Positives = 63/86 (73%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP+YSPTSP+YS P+SP YSP+SP S SP YSP+SP
Sbjct: 1536 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1595
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + Y+P
Sbjct: 1596 AYSPTSPAYSPTSPAYSPTSPA-YSP 1620
Score = 94.4 bits (233), Expect = 4e-18
Identities = 52/86 (60%), Positives = 63/86 (73%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP+YSPTSP+YS P+SP YSP+SP S SP YSP+SP
Sbjct: 1557 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1616
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + Y+P
Sbjct: 1617 AYSPTSPAYSPTSPAYSPTSPA-YSP 1641
Score = 94.4 bits (233), Expect = 4e-18
Identities = 52/86 (60%), Positives = 63/86 (73%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP+YSPTSP+YS P+SP YSP+SP S SP YSP+SP
Sbjct: 1578 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1637
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + Y+P
Sbjct: 1638 AYSPTSPAYSPTSPAYSPTSPA-YSP 1662
Score = 94.4 bits (233), Expect = 4e-18
Identities = 53/86 (61%), Positives = 63/86 (73%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP+YSPTSP+YS P+SP YSP+SP S SP YSP+SP
Sbjct: 1599 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1658
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S QY+P
Sbjct: 1659 AYSPTSPQYSPTSPQYSPTS-PQYSP 1683
[119][TOP]
>UniRef100_B7G9I2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G9I2_PHATR
Length = 1706
Score = 107 bits (266), Expect = 5e-22
Identities = 53/83 (63%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1617 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1676
Query: 311 GYSPSQPGYSPSSTSQYTPQTND 243
YSP+ P YSP+S + Y+P D
Sbjct: 1677 AYSPTSPAYSPTSPA-YSPSGGD 1698
Score = 105 bits (262), Expect = 2e-21
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1533 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1592
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1593 AYSPTSPAYSPTSPA-YSP 1610
Score = 105 bits (262), Expect = 2e-21
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1554 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1613
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1614 AYSPTSPAYSPTSPA-YSP 1631
Score = 105 bits (262), Expect = 2e-21
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1575 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1634
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1635 AYSPTSPAYSPTSPA-YSP 1652
Score = 105 bits (262), Expect = 2e-21
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1596 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1655
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1656 AYSPTSPAYSPTSPA-YSP 1673
Score = 104 bits (259), Expect = 3e-21
Identities = 50/77 (64%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1514 SPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1573
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S + Y+P
Sbjct: 1574 SPTSPAYSPTSPA-YSP 1589
Score = 104 bits (259), Expect = 3e-21
Identities = 51/83 (61%), Positives = 60/83 (72%), Gaps = 2/83 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1624 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1683
Query: 311 GYSPSQPGYSPSSTSQYTPQTND 243
YSP+ P YSPS + D
Sbjct: 1684 AYSPTSPAYSPSGGDDKKDEMED 1706
Score = 95.5 bits (236), Expect = 2e-18
Identities = 54/97 (55%), Positives = 66/97 (68%), Gaps = 9/97 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP+YSPTSP+YS P+SP YSP+SP S SP YSP+SP
Sbjct: 1603 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1662
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTPQTNDQDERGQD 222
+SP S YSP+ P YSP+S + Y+P + G D
Sbjct: 1663 AYSPTSPAYSPTSPAYSPTSPA-YSPTSPAYSPSGGD 1698
Score = 94.4 bits (233), Expect = 4e-18
Identities = 52/86 (60%), Positives = 63/86 (73%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP+YSPTSP+YS P+SP YSP+SP S SP YSP+SP
Sbjct: 1519 PTSPQYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1578
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + Y+P
Sbjct: 1579 AYSPTSPAYSPTSPAYSPTSPA-YSP 1603
Score = 94.4 bits (233), Expect = 4e-18
Identities = 52/86 (60%), Positives = 63/86 (73%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP+YSPTSP+YS P+SP YSP+SP S SP YSP+SP
Sbjct: 1540 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1599
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + Y+P
Sbjct: 1600 AYSPTSPAYSPTSPAYSPTSPA-YSP 1624
Score = 94.4 bits (233), Expect = 4e-18
Identities = 52/86 (60%), Positives = 63/86 (73%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP+YSPTSP+YS P+SP YSP+SP S SP YSP+SP
Sbjct: 1561 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1620
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + Y+P
Sbjct: 1621 AYSPTSPAYSPTSPAYSPTSPA-YSP 1645
Score = 94.4 bits (233), Expect = 4e-18
Identities = 52/86 (60%), Positives = 63/86 (73%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP+YSPTSP+YS P+SP YSP+SP S SP YSP+SP
Sbjct: 1582 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1641
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + Y+P
Sbjct: 1642 AYSPTSPAYSPTSPAYSPTSPA-YSP 1666
Score = 80.5 bits (197), Expect = 5e-14
Identities = 44/87 (50%), Positives = 53/87 (60%), Gaps = 18/87 (20%)
Frame = -3
Query: 461 SPNYSP-----------------TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 333
SP YSP SP+YSPTSP YSP+SP YSP+SP S SP YSP+S
Sbjct: 1490 SPAYSPDSGSYGSGFASGSYGAGDSPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYSPTS 1549
Query: 332 PQFSP-STGYSPSQPGYSPSSTSQYTP 255
P +SP S YSP+ P YSP+S + Y+P
Sbjct: 1550 PAYSPTSPAYSPTSPAYSPTSPA-YSP 1575
Score = 60.8 bits (146), Expect = 4e-08
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP---SSPYNSGVSPDYSPSSPQFSP-S 315
+SP+ +SP + S SP+YSP S +Y S Y +G SP YSP+SPQ+SP S
Sbjct: 1470 ASPFVDGGAAFSPAVGAAS-FSPAYSPDSGSYGSGFASGSYGAGDSPAYSPTSPQYSPTS 1528
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1529 PAYSPTSPAYSPTSPA-YSP 1547
[120][TOP]
>UniRef100_A8IRZ2 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IRZ2_CHLRE
Length = 1789
Score = 106 bits (264), Expect = 9e-22
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1552 PTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1611
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1612 AYSPTSPAYSPTSPA-YSP 1629
Score = 105 bits (262), Expect = 2e-21
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1573 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1632
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1633 AYSPTSPAYSPTSPA-YSP 1650
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP YSPTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1545 PMSPGYSPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1604
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1605 AYSPTSPAYSPTSPA-YSP 1622
Score = 104 bits (259), Expect = 3e-21
Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 5/82 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1580 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1639
Query: 311 GYSPSQPGYSPSS---TSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1640 AYSPTSPAYSPTSPAYSPAYSP 1661
Score = 103 bits (257), Expect = 6e-21
Identities = 50/74 (67%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1601 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPA-- 1658
Query: 308 YSPSQPGYSPSSTS 267
YSP+ P YSP+S S
Sbjct: 1659 YSPTSPQYSPTSPS 1672
Score = 100 bits (249), Expect = 5e-20
Identities = 56/98 (57%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+ S SP YSP+SP SP S
Sbjct: 1622 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPA---YSPTSPQYSPTSPSMSPTSP 1678
Query: 311 GYSPSQPGYSPSSTSQYTPQTNDQDERGQD*WRRSMRP 198
YSP+ P YSP+S + Y+P T + RRS RP
Sbjct: 1679 RYSPTSPNYSPTSPN-YSPSTRQR--------RRSTRP 1707
Score = 94.4 bits (233), Expect = 4e-18
Identities = 52/86 (60%), Positives = 63/86 (73%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP+YSPTSP+YS P+SP YSP+SP S SP YSP+SP
Sbjct: 1559 PTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1618
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + Y+P
Sbjct: 1619 AYSPTSPAYSPTSPAYSPTSPA-YSP 1643
Score = 79.7 bits (195), Expect = 9e-14
Identities = 45/82 (54%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSP----TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 321
P+SP YSPTSP YSP TSP YSPTSPS SP+SP YSP+SP S SP+YSPS+ Q
Sbjct: 1643 PTSPAYSPTSPAYSPAYSPTSPQYSPTSPSMSPTSPRYSPTSPNYSPTSPNYSPSTRQRR 1702
Query: 320 PSTGYSPSQPGYSPSSTSQYTP 255
ST P+ G ++ Q P
Sbjct: 1703 RSTRPRPTSLGRRRAARVQAAP 1724
Score = 70.5 bits (171), Expect = 6e-11
Identities = 45/122 (36%), Positives = 57/122 (46%), Gaps = 53/122 (43%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSP----TSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 321
P+SP YSPTSP YSPTSP+YSP TSP YSP+SP+ SP+SP S SP+YSP+SP +S
Sbjct: 1636 PTSPAYSPTSPAYSPTSPAYSPAYSPTSPQYSPTSPSMSPTSPRYSPTSPNYSPTSPNYS 1695
Query: 320 PST------------------------------------------------GYSPSQPGY 285
PST + P++P
Sbjct: 1696 PSTRQRRRSTRPRPTSLGRRRAARVQAAPTPAPPTAPPRMSAPSTHLAPPSAHPPTRPRR 1755
Query: 284 SP 279
+P
Sbjct: 1756 AP 1757
Score = 53.1 bits (126), Expect = 9e-06
Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Frame = -3
Query: 479 SPYSPTSPN-YSPTSPSY--SPTSPSYSPSSPTYSP---SSPYNSGVSPDYSPSSPQFSP 318
S +SP P +SP P SP YSP+SP +SP S SP YSP+SP +SP
Sbjct: 1524 SGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPG---YSPTSPRYSPTSPAYSPTSPAYSP 1580
Query: 317 -STGYSPSQPGYSPSSTSQYTP 255
S YSP+ P YSP+S + Y+P
Sbjct: 1581 TSPAYSPTSPAYSPTSPA-YSP 1601
[121][TOP]
>UniRef100_Q9C428 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monoblepharis
macrandra RepID=Q9C428_9FUNG
Length = 1603
Score = 106 bits (264), Expect = 9e-22
Identities = 50/71 (70%), Positives = 59/71 (83%), Gaps = 2/71 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSPSY+PTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1533 PTSPGYSPTSPSYSPTSPSYTPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1592
Query: 311 GYSPSQPGYSP 279
YSP+ P YSP
Sbjct: 1593 SYSPTSPSYSP 1603
Score = 104 bits (260), Expect = 3e-21
Identities = 50/73 (68%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
Frame = -3
Query: 470 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQ 294
SPTSP YSPTSPSYSPTSPSY+P+SP+YSP+SP S SP YSP+SP +SP S YSP+
Sbjct: 1532 SPTSPGYSPTSPSYSPTSPSYTPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1591
Query: 293 PGYSPSSTSQYTP 255
P YSP+S S Y+P
Sbjct: 1592 PSYSPTSPS-YSP 1603
[122][TOP]
>UniRef100_O00820 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acanthamoeba
castellanii RepID=O00820_ACACA
Length = 1569
Score = 105 bits (263), Expect = 1e-21
Identities = 53/79 (67%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP YSP+SP YSP SP YSPSSP YSP+SP S SP YSP+SP +SP S
Sbjct: 1484 PSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSPASPSYSPTSPAYSPTSP 1543
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSPS P YSP+S S Y+P
Sbjct: 1544 SYSPSSPSYSPTSPS-YSP 1561
Score = 104 bits (260), Expect = 3e-21
Identities = 50/72 (69%), Positives = 57/72 (79%), Gaps = 2/72 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP SP YSP+SP+YSPTSP YSP+SP+YSP+SP S SP YSPSSP +SP S
Sbjct: 1498 PSSPGYSPASPGYSPSSPAYSPTSPKYSPASPSYSPTSPAYSPTSPSYSPSSPSYSPTSP 1557
Query: 311 GYSPSQPGYSPS 276
YSP+ P YSPS
Sbjct: 1558 SYSPTSPSYSPS 1569
Score = 103 bits (258), Expect = 5e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
PSSP YSP+SP YSP SP YSP+SP+YSP+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1491 PSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSPASPSYSPTSPAYSPTSPSYSPSSP 1550
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1551 SYSPTSPSYSPTSPS-YSP 1568
Score = 101 bits (252), Expect = 2e-20
Identities = 49/74 (66%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 297
YSP+SP YSP+SP YSP+SP YSP+SP YSPSSP S SP YSP+SP +SP S YSP+
Sbjct: 1482 YSPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSPASPSYSPTSPAYSPT 1541
Query: 296 QPGYSPSSTSQYTP 255
P YSPSS S Y+P
Sbjct: 1542 SPSYSPSSPS-YSP 1554
Score = 98.6 bits (244), Expect = 2e-19
Identities = 51/79 (64%), Positives = 57/79 (72%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP SP YSP YSP+SP YSPSSP YSPSSP S SP YSPSSP +SP S
Sbjct: 1463 PSSPSYSPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSP 1522
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1523 KYSPASPSYSPTSPA-YSP 1540
Score = 92.0 bits (227), Expect = 2e-17
Identities = 46/73 (63%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Frame = -3
Query: 470 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQ 294
SP+SP+YSP SP YSP YSPSSP YSPSSP S SP YSP+SP +SPS+ YSP+
Sbjct: 1462 SPSSPSYSPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTS 1521
Query: 293 PGYSPSSTSQYTP 255
P YSP+S S Y+P
Sbjct: 1522 PKYSPASPS-YSP 1533
Score = 79.3 bits (194), Expect = 1e-13
Identities = 45/82 (54%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
Frame = -3
Query: 485 PSSPYSPTSP--NYSPTSPSYSPT--SPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 318
P++ YSP +SP S+SP+ SPSYSP+SP YSP+ S SP YSPSSP +SP
Sbjct: 1439 PAASYSPYVDFGEFSPGRGSFSPSPSSPSYSPASPGYSPAGAGYSPSSPGYSPSSPGYSP 1498
Query: 317 ST-GYSPSQPGYSPSSTSQYTP 255
S+ GYSP+ PGYSPSS + Y+P
Sbjct: 1499 SSPGYSPASPGYSPSSPA-YSP 1519
[123][TOP]
>UniRef100_Q58EF0 Polr2a protein (Fragment) n=2 Tax=Danio rerio RepID=Q58EF0_DANRE
Length = 161
Score = 105 bits (262), Expect = 2e-21
Identities = 52/95 (54%), Positives = 68/95 (71%), Gaps = 12/95 (12%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPTSP YSPT+P YSPTSP+YSP+SPTY+P+SP S SP YSP+SP++SP+
Sbjct: 62 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSPTSP 121
Query: 314 ---------TGYSPSQPGYSPSSTSQYTPQTNDQD 237
+ YSP+ PGYSP+S + Y+P + D
Sbjct: 122 TYSPTSPKGSTYSPTSPGYSPTSPT-YSPAISPDD 155
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 13 PSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 72
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 73 TYSPTTPKYSPTSPT-YSP 90
Score = 104 bits (260), Expect = 3e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 55 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSP 114
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 115 KYSPTSPTYSPTSPKGSTYSP 135
Score = 103 bits (258), Expect = 5e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 41 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSP 100
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 101 KYSPTSPTYSPTS-PKYSP 118
Score = 102 bits (253), Expect = 2e-20
Identities = 49/79 (62%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 6 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 65
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP +T +Y+P
Sbjct: 66 KYSPTSPTYSP-TTPKYSP 83
Score = 99.0 bits (245), Expect = 1e-19
Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 34 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP 93
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S + Y+P
Sbjct: 94 TYTPTSPKYSPTSPT-YSP 111
Score = 97.1 bits (240), Expect = 6e-19
Identities = 45/76 (59%), Positives = 61/76 (80%), Gaps = 1/76 (1%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 297
Y+P SP Y+P+SPSYSP+SPSYSP+SP Y+P+SP S SP+Y+P+SP++SP S YSP+
Sbjct: 4 YTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 63
Query: 296 QPGYSPSSTSQYTPQT 249
P YSP+S + Y+P T
Sbjct: 64 SPKYSPTSPT-YSPTT 78
Score = 93.6 bits (231), Expect = 6e-18
Identities = 51/83 (61%), Positives = 61/83 (73%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFS 321
PSSP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP SP SP YSP+SP +S
Sbjct: 20 PSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYS 75
Query: 320 PST-GYSPSQPGYSPSSTSQYTP 255
P+T YSP+ P YSP+S + YTP
Sbjct: 76 PTTPKYSPTSPTYSPTSPT-YTP 97
Score = 89.0 bits (219), Expect = 2e-16
Identities = 41/69 (59%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Frame = -3
Query: 458 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 282
P Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S YSP+ P YS
Sbjct: 2 PRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYS 61
Query: 281 PSSTSQYTP 255
P+S +Y+P
Sbjct: 62 PTS-PKYSP 69
[124][TOP]
>UniRef100_C1MI48 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MI48_9CHLO
Length = 1694
Score = 105 bits (262), Expect = 2e-21
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1563 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1622
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1623 AYSPTSPAYSPTSPA-YSP 1640
Score = 103 bits (257), Expect = 6e-21
Identities = 50/73 (68%), Positives = 59/73 (80%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1584 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1643
Query: 311 GYSPSQPGYSPSS 273
YSP+ P YSP+S
Sbjct: 1644 AYSPTSPQYSPTS 1656
Score = 101 bits (252), Expect = 2e-20
Identities = 50/78 (64%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
P+SP +PTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1558 PTSP-APTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA 1616
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1617 YSPTSPAYSPTSPA-YSP 1633
Score = 99.4 bits (246), Expect = 1e-19
Identities = 52/84 (61%), Positives = 63/84 (75%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-----PSSPTYSPSSPYNSGVSPDYSPSSPQF 324
P+SP YSPTSP YSPTSP+YSPTSP+YS P+SP YSP+SP S SP YSP+SP +
Sbjct: 1530 PTSPGYSPTSPAYSPTSPAYSPTSPAYSPTSPAPTSPAYSPTSPAYSPTSPAYSPTSPAY 1589
Query: 323 SP-STGYSPSQPGYSPSSTSQYTP 255
SP S YSP+ P YSP+S + Y+P
Sbjct: 1590 SPTSPAYSPTSPAYSPTSPA-YSP 1612
Score = 99.4 bits (246), Expect = 1e-19
Identities = 50/95 (52%), Positives = 66/95 (69%), Gaps = 11/95 (11%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SPQ+SP++
Sbjct: 1598 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPTSV 1657
Query: 311 ---------GYSPSQPGYSPSSTSQYTPQTNDQDE 234
SP+ P YSP+ + +T +++E
Sbjct: 1658 GLSDVENAPTRSPTSPQYSPTEGAFSPMETTEKEE 1692
Score = 97.4 bits (241), Expect = 4e-19
Identities = 47/74 (63%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 297
+SPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP + SP YSP+SP +SP S YSP+
Sbjct: 1528 FSPTSPGYSPTSPAYSPTSPAYSPTSPAYSPTSP--APTSPAYSPTSPAYSPTSPAYSPT 1585
Query: 296 QPGYSPSSTSQYTP 255
P YSP+S + Y+P
Sbjct: 1586 SPAYSPTSPA-YSP 1598
Score = 95.9 bits (237), Expect = 1e-18
Identities = 53/86 (61%), Positives = 63/86 (73%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP+YSPTSP+YS P+SP YSP+SP S SP YSP+SP
Sbjct: 1570 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1629
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S QY+P
Sbjct: 1630 AYSPTSPAYSPTSPAYSPTS-PQYSP 1654
[125][TOP]
>UniRef100_A9TK89 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TK89_PHYPA
Length = 1646
Score = 105 bits (262), Expect = 2e-21
Identities = 54/97 (55%), Positives = 65/97 (67%), Gaps = 2/97 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP+YSPTSP YSPTSP YSP+SP+YSP+SP + SP YSP+SP +SP S
Sbjct: 1558 PTSPGYSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSP 1617
Query: 311 GYSPSQPGYSPSSTSQYTPQTNDQDERGQD*WRRSMR 201
YSP+ P YSP+S + T W R MR
Sbjct: 1618 SYSPTSPSYSPTSPAYKHKPT----------WLRGMR 1644
Score = 105 bits (261), Expect = 2e-21
Identities = 50/77 (64%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S P+SP+SP YSP+SP YSP SP YSP+SP YSP+SP S SP YSP+SP +SP S GY
Sbjct: 1518 SMPFSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGY 1577
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ PGYSP+S S Y+P
Sbjct: 1578 SPTSPGYSPTSPS-YSP 1593
Score = 105 bits (261), Expect = 2e-21
Identities = 52/79 (65%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP YSPTSP YSPTSP YSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1537 PLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPTSP 1596
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S S Y+P
Sbjct: 1597 SYAPTSPSYSPTSPS-YSP 1614
Score = 103 bits (257), Expect = 6e-21
Identities = 52/79 (65%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP SP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1530 PSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPTSP 1589
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P Y+P+S S Y+P
Sbjct: 1590 SYSPTSPSYAPTSPS-YSP 1607
Score = 76.6 bits (187), Expect = 8e-13
Identities = 45/81 (55%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSPYSPTSP-NYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP- 318
PS SP S +SP S +SP+SP YSPSSP YSP SP S SP YSP+SP +SP
Sbjct: 1500 PSLRASPLSEAQFSPYVGSMPFSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPT 1559
Query: 317 STGYSPSQPGYSPSSTSQYTP 255
S GYSP+ P YSP+S Y+P
Sbjct: 1560 SPGYSPTSPSYSPTSPG-YSP 1579
[126][TOP]
>UniRef100_O96452 DNA-directed RNA polymerase n=1 Tax=Antonospora locustae
RepID=O96452_ANTLO
Length = 1553
Score = 105 bits (262), Expect = 2e-21
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1441 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1500
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1501 AYSPTSPAYSPTSPA-YSP 1518
Score = 103 bits (257), Expect = 6e-21
Identities = 50/76 (65%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYS 303
S YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S YS
Sbjct: 1437 SVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYS 1496
Query: 302 PSQPGYSPSSTSQYTP 255
P+ P YSP+S + Y+P
Sbjct: 1497 PTSPAYSPTSPA-YSP 1511
Score = 102 bits (254), Expect = 1e-20
Identities = 52/86 (60%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1462 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1521
Query: 311 GYSPSQPGYSPSSTSQYTPQTNDQDE 234
YSP+ P Y PS+ + DQD+
Sbjct: 1522 AYSPTSPVYRPST------RAKDQDQ 1541
Score = 97.1 bits (240), Expect = 6e-19
Identities = 54/93 (58%), Positives = 65/93 (69%), Gaps = 9/93 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP+YSPTSP+YS P+SP YSP+SP S SP YSP+SP
Sbjct: 1448 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1507
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTPQTNDQDE 234
+SP S YSP+ P YSP+S Y P T +D+
Sbjct: 1508 AYSPTSPAYSPTSPAYSPTS-PVYRPSTRAKDQ 1539
Score = 91.7 bits (226), Expect = 2e-17
Identities = 43/69 (62%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP + PST
Sbjct: 1476 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPVYRPSTR 1535
Query: 308 YSPSQPGYS 282
G++
Sbjct: 1536 AKDQDQGFN 1544
Score = 82.4 bits (202), Expect = 1e-14
Identities = 45/91 (49%), Positives = 56/91 (61%), Gaps = 18/91 (19%)
Frame = -3
Query: 473 YSPTSPN-----------------YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDY 345
Y +S YSPTSP+YSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 1415 YGSSSVPFSPIAAHGYAAGTTPSVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1474
Query: 344 SPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
SP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1475 SPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1504
Score = 81.6 bits (200), Expect = 2e-14
Identities = 44/80 (55%), Positives = 58/80 (72%), Gaps = 4/80 (5%)
Frame = -3
Query: 482 SSPYSPTSPN--YSPTSPS-YSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
S P+SP + + + T+PS YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1419 SVPFSPIAAHGYAAGTTPSVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1478
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1479 PAYSPTSPAYSPTSPA-YSP 1497
[127][TOP]
>UniRef100_UPI00006A20E2 DNA-directed RNA polymerase II subunit RPB1 (EC 2.7.7.6) (RNA
polymerase II subunit B1) (DNA-directed RNA polymerase
II subunit A) (DNA-directed RNA polymerase III largest
subunit). n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI00006A20E2
Length = 162
Score = 105 bits (261), Expect = 2e-21
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 54 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 113
Query: 311 GYSPSQPGYSPSST--SQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 114 KYSPTSPTYSPTSPKGSTYSP 134
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 12 PSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 71
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 72 TYSPTTPKYSPTSPT-YSP 89
Score = 103 bits (257), Expect = 6e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
PSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 40 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 99
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S +Y+P
Sbjct: 100 KYSPTSPTYSPTS-PKYSP 117
Score = 102 bits (255), Expect = 1e-20
Identities = 51/94 (54%), Positives = 67/94 (71%), Gaps = 11/94 (11%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 68 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSP 127
Query: 314 --TGYSPSQPGYSPSS------TSQYTPQTNDQD 237
+ YSP+ PGYSP+S + +P +D+D
Sbjct: 128 KGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDED 161
Score = 102 bits (253), Expect = 2e-20
Identities = 49/79 (62%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 5 PQSPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 64
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP +T +Y+P
Sbjct: 65 KYSPTSPTYSP-TTPKYSP 82
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 33 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP 92
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ P YSP+S + Y+P
Sbjct: 93 VYTPTSPKYSPTSPT-YSP 110
Score = 97.4 bits (241), Expect = 4e-19
Identities = 45/76 (59%), Positives = 62/76 (81%), Gaps = 1/76 (1%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 297
Y+P SP+Y+P+SPSYSP+SPSYSP+SP Y+P+SP S SP+Y+P+SP++SP S YSP+
Sbjct: 3 YTPQSPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 62
Query: 296 QPGYSPSSTSQYTPQT 249
P YSP+S + Y+P T
Sbjct: 63 SPKYSPTSPT-YSPTT 77
Score = 92.4 bits (228), Expect = 1e-17
Identities = 51/83 (61%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGVSPDYSPSSPQFS 321
PSSP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP SP SP YSP+SP +S
Sbjct: 19 PSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYS 74
Query: 320 PST-GYSPSQPGYSPSSTSQYTP 255
P+T YSP+ P YSP+S YTP
Sbjct: 75 PTTPKYSPTSPTYSPTS-PVYTP 96
Score = 90.1 bits (222), Expect = 7e-17
Identities = 42/69 (60%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Frame = -3
Query: 458 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 282
P Y+P SPSY+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S YSP+ P YS
Sbjct: 1 PRYTPQSPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYS 60
Query: 281 PSSTSQYTP 255
P+S +Y+P
Sbjct: 61 PTS-PKYSP 68
[128][TOP]
>UniRef100_B4R347 RNA polymerase II 215kD subunit n=1 Tax=Drosophila simulans
RepID=B4R347_DROSI
Length = 552
Score = 104 bits (259), Expect = 3e-21
Identities = 51/87 (58%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
P + YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P T
Sbjct: 332 PGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPS 391
Query: 308 YSPSQPGYSPSSTSQYTPQTNDQDERG 228
YSP+ P YS S QY+P + + G
Sbjct: 392 YSPTSPNYSAS--PQYSPASPAYSQTG 416
Score = 102 bits (255), Expect = 1e-20
Identities = 48/78 (61%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSP+SPSYSPTSP YSP+SP+YSP+SP + V+P YSP+SP +S S
Sbjct: 345 PNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQ 404
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YS + +Y+P
Sbjct: 405 YSPASPAYSQTGV-KYSP 421
Score = 95.1 bits (235), Expect = 2e-18
Identities = 54/94 (57%), Positives = 65/94 (69%), Gaps = 17/94 (18%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P S SP+YS +SPQ+SP+
Sbjct: 352 PTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPQYSPASP 410
Query: 314 ----TG--YSPSQPGYSPSSTS--------QYTP 255
TG YSP+ P YSP S S QYTP
Sbjct: 411 AYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 444
Score = 88.2 bits (217), Expect = 3e-16
Identities = 52/108 (48%), Positives = 65/108 (60%), Gaps = 31/108 (28%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSPY 369
P+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 373 PTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPSPS 432
Query: 368 NSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 255
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 433 YDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 478
Score = 84.0 bits (206), Expect = 5e-15
Identities = 49/96 (51%), Positives = 59/96 (61%), Gaps = 20/96 (20%)
Frame = -3
Query: 482 SSPYSPTSPNYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSPYNSG 360
SS YSPTSP YSPT SPS YSP+S +YSP+SP+YSP+SP S
Sbjct: 300 SSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSP 359
Query: 359 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
SP YSP+SP +SP S YSP+ P Y+P T Y+P
Sbjct: 360 SSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 394
Score = 83.2 bits (204), Expect = 8e-15
Identities = 43/88 (48%), Positives = 62/88 (70%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSP-----YSPTSPNYSPT-----SPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
P+SP YSPTSPNY+ + SP+YSP+SP+YSP+SP Y +SP + +P+++P
Sbjct: 235 PASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLY--ASPRYASTTPNFNPQ 292
Query: 335 SPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S +SP S+GYSP+ PGYSP++ Q +P
Sbjct: 293 STGYSPSSSGYSPTSPGYSPTAQFQSSP 320
Score = 82.4 bits (202), Expect = 1e-14
Identities = 47/90 (52%), Positives = 60/90 (66%), Gaps = 10/90 (11%)
Frame = -3
Query: 479 SPYSPTSPN----YSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 327
SPY P SP+ YSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P
Sbjct: 231 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYA--SPRYASTTPN 288
Query: 326 FSP-STGYSPSQPGYSPSSTSQYTPQTNDQ 240
F+P STGYSPS GYSP+S Y+P Q
Sbjct: 289 FNPQSTGYSPSSSGYSPTSPG-YSPTAQFQ 317
Score = 81.3 bits (199), Expect = 3e-14
Identities = 45/107 (42%), Positives = 57/107 (53%), Gaps = 28/107 (26%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN-------------SGVSPDY 345
PS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S SP Y
Sbjct: 431 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRY 490
Query: 344 SPSSPQFSPST---------------GYSPSQPGYSPSSTSQYTPQT 249
SP+ +SPS+ YSP+ P YSP++ S Y+P++
Sbjct: 491 SPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPKS 537
Score = 78.2 bits (191), Expect = 3e-13
Identities = 50/97 (51%), Positives = 59/97 (60%), Gaps = 19/97 (19%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPT-----SPSYSPS-----SP--TYSPSSPYNSGVSPDYSP 339
S+ YSP+S YSPTSP YSPT SPS++ S SP YSPSS S SP YSP
Sbjct: 293 STGYSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSP 352
Query: 338 SSPQFSPST-GYSPSQPGYSPSSTS------QYTPQT 249
+SP +SPS+ YSP+ P YSP+S S YTP T
Sbjct: 353 TSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 389
Score = 72.0 bits (175), Expect = 2e-11
Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 23/94 (24%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPT-----------------SPSYS---PSSPTYSPSSPY 369
P+SP YSPTSP YSP+SP +SP+ SP+ S PSS YSP+SP
Sbjct: 451 PASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT 510
Query: 368 NSGVSPDYSPSSPQFSPS--TGYSPSQPGYSPSS 273
+ + +YSP+SP +SP+ + YSP P YSPSS
Sbjct: 511 YTPTARNYSPTSPMYSPTAPSHYSPKSPAYSPSS 544
Score = 70.9 bits (172), Expect = 4e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 315
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 495 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPKSPAYSPSSPTFEES 550
Score = 66.2 bits (160), Expect = 1e-09
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 16/92 (17%)
Frame = -3
Query: 479 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 330
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 190 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSP 249
Query: 329 QFSPST------GYSPSQPGYSPSSTSQYTPQ 252
++ S+ YSPS P YSP+S +P+
Sbjct: 250 NYTASSPGGASPNYSPSSPNYSPTSPLYASPR 281
Score = 62.4 bits (150), Expect = 2e-08
Identities = 30/40 (75%), Positives = 34/40 (85%), Gaps = 2/40 (5%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 372
P+SP Y+PT+ NYSPTSP YSPT+PS YSP SP YSPSSP
Sbjct: 506 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPKSPAYSPSSP 545
[129][TOP]
>UniRef100_B4IK28 DNA-directed RNA polymerase n=1 Tax=Drosophila sechellia
RepID=B4IK28_DROSE
Length = 1887
Score = 104 bits (259), Expect = 3e-21
Identities = 51/87 (58%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
P + YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P T
Sbjct: 1667 PGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPS 1726
Query: 308 YSPSQPGYSPSSTSQYTPQTNDQDERG 228
YSP+ P YS S QY+P + + G
Sbjct: 1727 YSPTSPNYSAS--PQYSPASPAYSQTG 1751
Score = 102 bits (255), Expect = 1e-20
Identities = 48/78 (61%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSP+SPSYSPTSP YSP+SP+YSP+SP + V+P YSP+SP +S S
Sbjct: 1680 PNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQ 1739
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YS + +Y+P
Sbjct: 1740 YSPASPAYSQTGV-KYSP 1756
Score = 95.1 bits (235), Expect = 2e-18
Identities = 54/94 (57%), Positives = 65/94 (69%), Gaps = 17/94 (18%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P S SP+YS +SPQ+SP+
Sbjct: 1687 PTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPQYSPASP 1745
Query: 314 ----TG--YSPSQPGYSPSSTS--------QYTP 255
TG YSP+ P YSP S S QYTP
Sbjct: 1746 AYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1779
Score = 88.2 bits (217), Expect = 3e-16
Identities = 52/108 (48%), Positives = 65/108 (60%), Gaps = 31/108 (28%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSPY 369
P+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1708 PTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPSPS 1767
Query: 368 NSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 255
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1768 YDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1813
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 22/99 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP-------- 351
P SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1772 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSI 1831
Query: 350 ------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 255
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1832 YSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1870
Score = 84.0 bits (206), Expect = 5e-15
Identities = 49/96 (51%), Positives = 59/96 (61%), Gaps = 20/96 (20%)
Frame = -3
Query: 482 SSPYSPTSPNYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSPYNSG 360
SS YSPTSP YSPT SPS YSP+S +YSP+SP+YSP+SP S
Sbjct: 1635 SSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSP 1694
Query: 359 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
SP YSP+SP +SP S YSP+ P Y+P T Y+P
Sbjct: 1695 SSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 1729
Score = 83.2 bits (204), Expect = 8e-15
Identities = 43/88 (48%), Positives = 62/88 (70%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSP-----YSPTSPNYSPT-----SPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
P+SP YSPTSPNY+ + SP+YSP+SP+YSP+SP Y +SP + +P+++P
Sbjct: 1570 PASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLY--ASPRYASTTPNFNPQ 1627
Query: 335 SPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S +SP S+GYSP+ PGYSP++ Q +P
Sbjct: 1628 STGYSPSSSGYSPTSPGYSPTAQFQSSP 1655
Score = 83.2 bits (204), Expect = 8e-15
Identities = 40/73 (54%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--T 312
PS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+ +
Sbjct: 1807 PSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPS 1866
Query: 311 GYSPSQPGYSPSS 273
YSP+ P YSPSS
Sbjct: 1867 HYSPTSPAYSPSS 1879
Score = 82.4 bits (202), Expect = 1e-14
Identities = 47/90 (52%), Positives = 60/90 (66%), Gaps = 10/90 (11%)
Frame = -3
Query: 479 SPYSPTSPN----YSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 327
SPY P SP+ YSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P
Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYA--SPRYASTTPN 1623
Query: 326 FSP-STGYSPSQPGYSPSSTSQYTPQTNDQ 240
F+P STGYSPS GYSP+S Y+P Q
Sbjct: 1624 FNPQSTGYSPSSSGYSPTSPG-YSPTAQFQ 1652
Score = 80.5 bits (197), Expect = 5e-14
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQF 324
PS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP++
Sbjct: 1766 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRY 1825
Query: 323 SPSTG-YSPSQPGYSPSSTSQYTP 255
SP+ YSPS YSP+S + YTP
Sbjct: 1826 SPNMSIYSPSSTKYSPTSPT-YTP 1848
Score = 78.2 bits (191), Expect = 3e-13
Identities = 50/97 (51%), Positives = 59/97 (60%), Gaps = 19/97 (19%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPT-----SPSYSPS-----SP--TYSPSSPYNSGVSPDYSP 339
S+ YSP+S YSPTSP YSPT SPS++ S SP YSPSS S SP YSP
Sbjct: 1628 STGYSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSP 1687
Query: 338 SSPQFSPST-GYSPSQPGYSPSSTS------QYTPQT 249
+SP +SPS+ YSP+ P YSP+S S YTP T
Sbjct: 1688 TSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1724
Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 315
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1830 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1885
Score = 66.2 bits (160), Expect = 1e-09
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 16/92 (17%)
Frame = -3
Query: 479 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 330
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSP 1584
Query: 329 QFSPST------GYSPSQPGYSPSSTSQYTPQ 252
++ S+ YSPS P YSP+S +P+
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTSPLYASPR 1616
Score = 62.8 bits (151), Expect = 1e-08
Identities = 30/40 (75%), Positives = 35/40 (87%), Gaps = 2/40 (5%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 372
P+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1841 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1880
[130][TOP]
>UniRef100_A9UNH9 DNA-directed RNA polymerase n=1 Tax=Drosophila melanogaster
RepID=A9UNH9_DROME
Length = 1887
Score = 104 bits (259), Expect = 3e-21
Identities = 51/87 (58%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
P + YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P T
Sbjct: 1667 PGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPS 1726
Query: 308 YSPSQPGYSPSSTSQYTPQTNDQDERG 228
YSP+ P YS S QY+P + + G
Sbjct: 1727 YSPTSPNYSAS--PQYSPASPAYSQTG 1751
Score = 102 bits (255), Expect = 1e-20
Identities = 48/78 (61%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSP+SPSYSPTSP YSP+SP+YSP+SP + V+P YSP+SP +S S
Sbjct: 1680 PNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQ 1739
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YS + +Y+P
Sbjct: 1740 YSPASPAYSQTGV-KYSP 1756
Score = 95.1 bits (235), Expect = 2e-18
Identities = 54/94 (57%), Positives = 65/94 (69%), Gaps = 17/94 (18%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P S SP+YS +SPQ+SP+
Sbjct: 1687 PTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPQYSPASP 1745
Query: 314 ----TG--YSPSQPGYSPSSTS--------QYTP 255
TG YSP+ P YSP S S QYTP
Sbjct: 1746 AYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1779
Score = 88.2 bits (217), Expect = 3e-16
Identities = 52/108 (48%), Positives = 65/108 (60%), Gaps = 31/108 (28%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSPY 369
P+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1708 PTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPSPS 1767
Query: 368 NSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 255
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1768 YDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1813
Score = 85.1 bits (209), Expect = 2e-15
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 22/99 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP-------- 351
P SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1772 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSI 1831
Query: 350 ------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 255
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1832 YSPSSTKYSPTSPTYTPTARNYSPTPPMYSPTAPSHYSP 1870
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/96 (51%), Positives = 59/96 (61%), Gaps = 20/96 (20%)
Frame = -3
Query: 482 SSPYSPTSPNYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSPYNSG 360
SS YSPTSP YSPT SPS YSP+S +YSP+SP+YSP+SP S
Sbjct: 1635 SSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSP 1694
Query: 359 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
SP YSP+SP +SP S YSP+ P Y+P T Y+P
Sbjct: 1695 SSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 1729
Score = 81.6 bits (200), Expect = 2e-14
Identities = 47/90 (52%), Positives = 60/90 (66%), Gaps = 10/90 (11%)
Frame = -3
Query: 479 SPYSPTSPN----YSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 327
SPY P SP+ YSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P
Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYA--SPRYASTTPN 1623
Query: 326 FSP-STGYSPSQPGYSPSSTSQYTPQTNDQ 240
F+P STGYSPS GYSP+S Y+P Q
Sbjct: 1624 FNPQSTGYSPSSSGYSPTS-PVYSPTVQFQ 1652
Score = 81.3 bits (199), Expect = 3e-14
Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--T 312
PS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+ P +SP+ +
Sbjct: 1807 PSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTPPMYSPTAPS 1866
Query: 311 GYSPSQPGYSPSS 273
YSP+ P YSPSS
Sbjct: 1867 HYSPTSPAYSPSS 1879
Score = 80.5 bits (197), Expect = 5e-14
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQF 324
PS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP++
Sbjct: 1766 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRY 1825
Query: 323 SPSTG-YSPSQPGYSPSSTSQYTP 255
SP+ YSPS YSP+S + YTP
Sbjct: 1826 SPNMSIYSPSSTKYSPTSPT-YTP 1848
Score = 77.4 bits (189), Expect = 5e-13
Identities = 50/97 (51%), Positives = 59/97 (60%), Gaps = 19/97 (19%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPT-----SPSYSPS-----SP--TYSPSSPYNSGVSPDYSP 339
S+ YSP+S YSPTSP YSPT SPS++ S SP YSPSS S SP YSP
Sbjct: 1628 STGYSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSP 1687
Query: 338 SSPQFSPST-GYSPSQPGYSPSSTS------QYTPQT 249
+SP +SPS+ YSP+ P YSP+S S YTP T
Sbjct: 1688 TSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1724
Score = 69.7 bits (169), Expect = 9e-11
Identities = 33/56 (58%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 315
S YSP+S YSPTSP+Y+PT+ +YSP+ P YSP++P + S SP YSPSSP F S
Sbjct: 1830 SIYSPSSTKYSPTSPTYTPTARNYSPTPPMYSPTAPSHYSPTSPAYSPSSPTFEES 1885
Score = 66.2 bits (160), Expect = 1e-09
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 16/92 (17%)
Frame = -3
Query: 479 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 330
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSP 1584
Query: 329 QFSPST------GYSPSQPGYSPSSTSQYTPQ 252
++ S+ YSPS P YSP+S +P+
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTSPLYASPR 1616
Score = 60.8 bits (146), Expect = 4e-08
Identities = 29/40 (72%), Positives = 34/40 (85%), Gaps = 2/40 (5%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 372
P+SP Y+PT+ NYSPT P YSPT+PS YSP+SP YSPSSP
Sbjct: 1841 PTSPTYTPTARNYSPTPPMYSPTAPSHYSPTSPAYSPSSP 1880
[131][TOP]
>UniRef100_P04052 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Drosophila
melanogaster RepID=RPB1_DROME
Length = 1887
Score = 104 bits (259), Expect = 3e-21
Identities = 51/87 (58%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
P + YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P T
Sbjct: 1667 PGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPS 1726
Query: 308 YSPSQPGYSPSSTSQYTPQTNDQDERG 228
YSP+ P YS S QY+P + + G
Sbjct: 1727 YSPTSPNYSAS--PQYSPASPAYSQTG 1751
Score = 102 bits (255), Expect = 1e-20
Identities = 48/78 (61%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSP+SPSYSPTSP YSP+SP+YSP+SP + V+P YSP+SP +S S
Sbjct: 1680 PNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQ 1739
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YS + +Y+P
Sbjct: 1740 YSPASPAYSQTGV-KYSP 1756
Score = 95.1 bits (235), Expect = 2e-18
Identities = 54/94 (57%), Positives = 65/94 (69%), Gaps = 17/94 (18%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 315
P+SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P S SP+YS +SPQ+SP+
Sbjct: 1687 PTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPQYSPASP 1745
Query: 314 ----TG--YSPSQPGYSPSSTS--------QYTP 255
TG YSP+ P YSP S S QYTP
Sbjct: 1746 AYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1779
Score = 88.2 bits (217), Expect = 3e-16
Identities = 52/108 (48%), Positives = 65/108 (60%), Gaps = 31/108 (28%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSPY 369
P+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1708 PTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPSPS 1767
Query: 368 NSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 255
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1768 YDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1813
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 22/99 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP-------- 351
P SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1772 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSI 1831
Query: 350 ------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 255
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1832 YSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1870
Score = 83.2 bits (204), Expect = 8e-15
Identities = 40/73 (54%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--T 312
PS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+ +
Sbjct: 1807 PSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPS 1866
Query: 311 GYSPSQPGYSPSS 273
YSP+ P YSPSS
Sbjct: 1867 HYSPTSPAYSPSS 1879
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/96 (51%), Positives = 59/96 (61%), Gaps = 20/96 (20%)
Frame = -3
Query: 482 SSPYSPTSPNYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSPYNSG 360
SS YSPTSP YSPT SPS YSP+S +YSP+SP+YSP+SP S
Sbjct: 1635 SSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSP 1694
Query: 359 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
SP YSP+SP +SP S YSP+ P Y+P T Y+P
Sbjct: 1695 SSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 1729
Score = 81.6 bits (200), Expect = 2e-14
Identities = 47/90 (52%), Positives = 60/90 (66%), Gaps = 10/90 (11%)
Frame = -3
Query: 479 SPYSPTSPN----YSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 327
SPY P SP+ YSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P
Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYA--SPRYASTTPN 1623
Query: 326 FSP-STGYSPSQPGYSPSSTSQYTPQTNDQ 240
F+P STGYSPS GYSP+S Y+P Q
Sbjct: 1624 FNPQSTGYSPSSSGYSPTS-PVYSPTVQFQ 1652
Score = 80.5 bits (197), Expect = 5e-14
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQF 324
PS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP++
Sbjct: 1766 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRY 1825
Query: 323 SPSTG-YSPSQPGYSPSSTSQYTP 255
SP+ YSPS YSP+S + YTP
Sbjct: 1826 SPNMSIYSPSSTKYSPTSPT-YTP 1848
Score = 77.4 bits (189), Expect = 5e-13
Identities = 50/97 (51%), Positives = 59/97 (60%), Gaps = 19/97 (19%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPT-----SPSYSPS-----SP--TYSPSSPYNSGVSPDYSP 339
S+ YSP+S YSPTSP YSPT SPS++ S SP YSPSS S SP YSP
Sbjct: 1628 STGYSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSP 1687
Query: 338 SSPQFSPST-GYSPSQPGYSPSSTS------QYTPQT 249
+SP +SPS+ YSP+ P YSP+S S YTP T
Sbjct: 1688 TSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1724
Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 315
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1830 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1885
Score = 66.2 bits (160), Expect = 1e-09
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 16/92 (17%)
Frame = -3
Query: 479 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 330
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSP 1584
Query: 329 QFSPST------GYSPSQPGYSPSSTSQYTPQ 252
++ S+ YSPS P YSP+S +P+
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTSPLYASPR 1616
Score = 62.8 bits (151), Expect = 1e-08
Identities = 30/40 (75%), Positives = 35/40 (87%), Gaps = 2/40 (5%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 372
P+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1841 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1880
[132][TOP]
>UniRef100_A7AWJ0 DNA-directed RNA polymerase n=1 Tax=Babesia bovis RepID=A7AWJ0_BABBO
Length = 1746
Score = 103 bits (258), Expect = 5e-21
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1604 PASPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1663
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1664 AYSPTSPAYSPTSPA-YSP 1681
Score = 103 bits (258), Expect = 5e-21
Identities = 50/73 (68%), Positives = 59/73 (80%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1611 PTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1670
Query: 311 GYSPSQPGYSPSS 273
YSP+ P YSP+S
Sbjct: 1671 AYSPTSPAYSPTS 1683
Score = 102 bits (254), Expect = 1e-20
Identities = 50/81 (61%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP++
Sbjct: 1625 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1684
Query: 311 --GYSPSQPGYSPSSTSQYTP 255
GY P+ P Y P+S + Y+P
Sbjct: 1685 NLGYLPTSPAYRPTSPA-YSP 1704
Score = 99.8 bits (247), Expect = 9e-20
Identities = 52/81 (64%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1618 PTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1677
Query: 311 GYSPSQP--GYSPSSTSQYTP 255
YSP+ P GY P+S + Y P
Sbjct: 1678 AYSPTSPNLGYLPTSPA-YRP 1697
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/74 (64%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 297
YSP SP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S YSP+
Sbjct: 1602 YSPASPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1661
Query: 296 QPGYSPSSTSQYTP 255
P YSP+S + Y+P
Sbjct: 1662 SPAYSPTSPA-YSP 1674
Score = 98.2 bits (243), Expect = 2e-19
Identities = 53/90 (58%), Positives = 66/90 (73%), Gaps = 7/90 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG---VSPDYSPSSPQFSP 318
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP N G SP Y P+SP +SP
Sbjct: 1646 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP-NLGYLPTSPAYRPTSPAYSP 1704
Query: 317 -STGYSPSQPGYSPSST--SQYTPQTNDQD 237
S YSP+ P YSP+S S +P+ + +D
Sbjct: 1705 TSPAYSPTSPAYSPTSPVYSPTSPEYSPED 1734
Score = 92.8 bits (229), Expect = 1e-17
Identities = 48/88 (54%), Positives = 63/88 (71%), Gaps = 4/88 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPS--YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 315
P+SP YSPTSP YSPTSP+YSPTSP+ Y P+SP Y P+SP S SP YSP+SP +SP+
Sbjct: 1660 PTSPAYSPTSPAYSPTSPAYSPTSPNLGYLPTSPAYRPTSPAYSPTSPAYSPTSPAYSPT 1719
Query: 314 TG-YSPSQPGYSPSSTSQYTPQTNDQDE 234
+ YSP+ P YSP ++P +++E
Sbjct: 1720 SPVYSPTSPEYSPE--DPFSPNPFEEEE 1745
Score = 90.5 bits (223), Expect = 5e-17
Identities = 46/79 (58%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP Y YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1583 PTSPVYSPTSPVYGQAGGVYSPASPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSP 1642
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1643 AYSPTSPAYSPTSPA-YSP 1660
Score = 83.6 bits (205), Expect = 6e-15
Identities = 45/83 (54%), Positives = 55/83 (66%), Gaps = 8/83 (9%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSP-------SYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 321
+P SP+ SPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 1572 NPLSPSMGMMSPTSPVYSPTSPVYGQAGGVYSPASPAYSPTSPLYSPTSPVYSPTSPAYS 1631
Query: 320 P-STGYSPSQPGYSPSSTSQYTP 255
P S YSP+ P YSP+S + Y+P
Sbjct: 1632 PTSPAYSPTSPAYSPTSPA-YSP 1653
Score = 78.2 bits (191), Expect = 3e-13
Identities = 46/96 (47%), Positives = 57/96 (59%), Gaps = 21/96 (21%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPS-------------YSPTSPSYSPSSP-------TYSPSSPYNSG 360
SP SP SP+Y+P SP+ SPTSP YSP+SP YSP+SP S
Sbjct: 1552 SPQSPVSPSYAPLSPNPLSPNPLSPSMGMMSPTSPVYSPTSPVYGQAGGVYSPASPAYSP 1611
Query: 359 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1612 TSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPA-YSP 1646
Score = 53.9 bits (128), Expect = 5e-06
Identities = 37/73 (50%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Frame = -3
Query: 473 YSPT--SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN---SGVSPDYSPSSPQFSPSTG 309
+SPT SP SP SPSY+P SP+ P SP +P SP S SP YSP+SP + + G
Sbjct: 1546 FSPTIMSPQ-SPVSPSYAPLSPN--PLSP--NPLSPSMGMMSPTSPVYSPTSPVYGQAGG 1600
Query: 308 -YSPSQPGYSPSS 273
YSP+ P YSP+S
Sbjct: 1601 VYSPASPAYSPTS 1613
[133][TOP]
>UniRef100_C5Y387 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5Y387_SORBI
Length = 1874
Score = 103 bits (257), Expect = 6e-21
Identities = 53/86 (61%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 318
P+SP YSP S +YSPTSP YSPTSPSYSP+S +YSP+SP+ S SP YSPSSP +SP
Sbjct: 1675 PTSPSYSPASLSYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPSSPSYSPTSP 1734
Query: 317 -----STGYSPSQPGYSPSSTSQYTP 255
S GYSP+ PGYSP+S + Y+P
Sbjct: 1735 TYSPTSLGYSPTSPGYSPTSPT-YSP 1759
Score = 97.1 bits (240), Expect = 6e-19
Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSPTSP YSPTSPSYSP+SPSYSP+SPTYSP+S S SP YSP+SP +SP S Y
Sbjct: 1705 SLSYSPTSPFYSPTSPSYSPSSPSYSPTSPTYSPTSLGYSPTSPGYSPTSPTYSPTSPNY 1764
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P Y+ S T + T
Sbjct: 1765 SPTSPSYNLSYTEYNSSNT 1783
Score = 96.7 bits (239), Expect = 7e-19
Identities = 49/77 (63%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSP S +YSPTSP YSPTSPSYSP+S +YSP+SP+ S SP YSP+S +SP S Y
Sbjct: 1656 SPSYSPASASYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPASLSYSPTSPFY 1715
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSPSS S Y+P
Sbjct: 1716 SPTSPSYSPSSPS-YSP 1731
Score = 93.2 bits (230), Expect = 8e-18
Identities = 51/83 (61%), Positives = 62/83 (74%), Gaps = 4/83 (4%)
Frame = -3
Query: 485 PSSP-YSPTS--PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP- 318
PSSP +SPTS P+YSP S SYSPTSP YSP+SP+YSP+S S SP YSP+SP +SP
Sbjct: 1645 PSSPSFSPTSTSPSYSPASASYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPA 1704
Query: 317 STGYSPSQPGYSPSSTSQYTPQT 249
S YSP+ P YSP+S S Y+P +
Sbjct: 1705 SLSYSPTSPFYSPTSPS-YSPSS 1726
Score = 90.5 bits (223), Expect = 5e-17
Identities = 52/105 (49%), Positives = 60/105 (57%), Gaps = 17/105 (16%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPD------------- 348
PSSP YSPTSP YSPTS YSPTSP YSP+SPTYSP+SP S SP
Sbjct: 1724 PSSPSYSPTSPTYSPTSLGYSPTSPGYSPTSPTYSPTSPNYSPTSPSYNLSYTEYNSSNT 1783
Query: 347 YSPSSPQF---SPSTGYSPSQPGYSPSSTSQYTPQTNDQDERGQD 222
YSP+ P+ S + YSP+ P YSP+S S P + R D
Sbjct: 1784 YSPTRPRITLDSQAPDYSPTSPTYSPTSPSYSLPSLSYSPNRPTD 1828
Score = 88.2 bits (217), Expect = 3e-16
Identities = 45/78 (57%), Positives = 58/78 (74%), Gaps = 3/78 (3%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTS--PSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
+P SP S Y+P+SPS+SPTS PSYSP+S +YSP+SP+ S SP YSP+S +SP S
Sbjct: 1634 NPISPNSSRYNPSSPSFSPTSTSPSYSPASASYSPTSPFYSPTSPSYSPASLSYSPTSPF 1693
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S S Y+P
Sbjct: 1694 YSPTSPSYSPASLS-YSP 1710
Score = 86.7 bits (213), Expect = 7e-16
Identities = 50/82 (60%), Positives = 58/82 (70%), Gaps = 9/82 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP+YSP S SYSPTSP YS PSSP+YSP+SP S S YSP+SP
Sbjct: 1689 PTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPSSPSYSPTSPTYSPTSLGYSPTSP 1748
Query: 329 QFSP-STGYSPSQPGYSPSSTS 267
+SP S YSP+ P YSP+S S
Sbjct: 1749 GYSPTSPTYSPTSPNYSPTSPS 1770
Score = 86.7 bits (213), Expect = 7e-16
Identities = 46/84 (54%), Positives = 56/84 (66%), Gaps = 11/84 (13%)
Frame = -3
Query: 482 SSPYSPT---------SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG--VSPDYSPS 336
S+ YSPT +P+YSPTSP+YSPTSPSYS S +YSP+ P + SPDYSP+
Sbjct: 1781 SNTYSPTRPRITLDSQAPDYSPTSPTYSPTSPSYSLPSLSYSPNRPTDDSGRPSPDYSPT 1840
Query: 335 SPQFSPSTGYSPSQPGYSPSSTSQ 264
SP FSP+ SP+ YSPSST Q
Sbjct: 1841 SPNFSPNRSDSPTAADYSPSSTGQ 1864
Score = 82.4 bits (202), Expect = 1e-14
Identities = 52/134 (38%), Positives = 66/134 (49%), Gaps = 52/134 (38%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP--------YNSG--------- 360
P+SP YSPTS YSPTSP YSPTSP+YSP+SP YSP+SP YNS
Sbjct: 1731 PTSPTYSPTSLGYSPTSPGYSPTSPTYSPTSPNYSPTSPSYNLSYTEYNSSNTYSPTRPR 1790
Query: 359 -----VSPDYSPSSPQFSP------------------------STGYSPSQPGYSPS--- 276
+PDYSP+SP +SP S YSP+ P +SP+
Sbjct: 1791 ITLDSQAPDYSPTSPTYSPTSPSYSLPSLSYSPNRPTDDSGRPSPDYSPTSPNFSPNRSD 1850
Query: 275 --STSQYTPQTNDQ 240
+ + Y+P + Q
Sbjct: 1851 SPTAADYSPSSTGQ 1864
Score = 78.2 bits (191), Expect = 3e-13
Identities = 44/95 (46%), Positives = 59/95 (62%), Gaps = 19/95 (20%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSP------TYSPSSPYNSGVSPD---YSPSSP 330
S+ Y+P SP YSPT+P Y+P SP YSP++P +YS +SP + +SP+ Y+PSSP
Sbjct: 1589 STSYTPVSPVYSPTTPVYTPMSPVYSPTTPVSSQIQSYSSASPIYNPISPNSSRYNPSSP 1648
Query: 329 QFSP----------STGYSPSQPGYSPSSTSQYTP 255
FSP S YSP+ P YSP+S S Y+P
Sbjct: 1649 SFSPTSTSPSYSPASASYSPTSPFYSPTSPS-YSP 1682
Score = 73.6 bits (179), Expect = 7e-12
Identities = 46/90 (51%), Positives = 57/90 (63%), Gaps = 13/90 (14%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSP------SYSPTSPSYSPSSPT---YSPSSPYNS--GVSPDYS 342
P++P Y+P SP YSPT+P SYS SP Y+P SP Y+PSSP S SP YS
Sbjct: 1601 PTTPVYTPMSPVYSPTTPVSSQIQSYSSASPIYNPISPNSSRYNPSSPSFSPTSTSPSYS 1660
Query: 341 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
P+S +SP S YSP+ P YSP+S S Y+P
Sbjct: 1661 PASASYSPTSPFYSPTSPSYSPASLS-YSP 1689
Score = 71.6 bits (174), Expect = 2e-11
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 11/86 (12%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP------DYSPSSPQFSP 318
+PY+ SP + TS SY+P SP YSP++P Y+P SP S +P YS +SP ++P
Sbjct: 1576 TPYNAASPVNASTSTSYTPVSPVYSPTTPVYTPMSPVYSPTTPVSSQIQSYSSASPIYNP 1635
Query: 317 ----STGYSPSQPGYSPSSTS-QYTP 255
S+ Y+PS P +SP+STS Y+P
Sbjct: 1636 ISPNSSRYNPSSPSFSPTSTSPSYSP 1661
Score = 62.8 bits (151), Expect = 1e-08
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Frame = -3
Query: 473 YSPTSPNYSP---TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYS 303
Y SP Y+P SP + TS SY+P SP YSP++P + +SP YSP++P S YS
Sbjct: 1568 YMAVSPIYTPYNAASPVNASTSTSYTPVSPVYSPTTPVYTPMSPVYSPTTPVSSQIQSYS 1627
Query: 302 PSQPGYSPSS--TSQYTPQT 249
+ P Y+P S +S+Y P +
Sbjct: 1628 SASPIYNPISPNSSRYNPSS 1647
[134][TOP]
>UniRef100_Q9XZU8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Drosophila
pseudoobscura pseudoobscura RepID=Q9XZU8_DROPS
Length = 1811
Score = 103 bits (257), Expect = 6e-21
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
P + YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P+T
Sbjct: 1591 PGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPS 1650
Query: 308 YSPSQPGYSPSSTSQYTPQTNDQDERG 228
YSP+ P YS S Y+P + + G
Sbjct: 1651 YSPTSPNYSAS--PHYSPASPAYSQTG 1675
Score = 101 bits (252), Expect = 2e-20
Identities = 47/78 (60%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S
Sbjct: 1604 PNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPH 1663
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YS + ++Y+P
Sbjct: 1664 YSPASPAYSQTG-AKYSP 1680
Score = 94.4 bits (233), Expect = 4e-18
Identities = 51/93 (54%), Positives = 62/93 (66%), Gaps = 16/93 (17%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSPQ 327
P+SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P++P N SP YSP+SP
Sbjct: 1611 PTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPA 1670
Query: 326 FSPS-TGYSPSQPGYSPSSTS--------QYTP 255
+S + YSP+ P YSP S S QYTP
Sbjct: 1671 YSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTP 1703
Score = 88.2 bits (217), Expect = 3e-16
Identities = 52/108 (48%), Positives = 65/108 (60%), Gaps = 31/108 (28%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSPY 369
P+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1632 PTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPS 1691
Query: 368 NSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 255
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1692 YDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1737
Score = 85.5 bits (210), Expect = 2e-15
Identities = 51/98 (52%), Positives = 59/98 (60%), Gaps = 20/98 (20%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTS--PS-----------------YSPSSPTYSPSSPYNSG 360
S+ YSP++ YSPTSP YSPTS PS YSPSS YSP+SP S
Sbjct: 1552 STGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSP 1611
Query: 359 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 249
SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1612 TSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPAT 1648
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 22/99 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP-------- 351
P SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1696 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSI 1755
Query: 350 ------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 255
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1756 YSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1794
Score = 84.0 bits (206), Expect = 5e-15
Identities = 47/91 (51%), Positives = 58/91 (63%), Gaps = 13/91 (14%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPT------------SPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
SPY P SP+ SPSYSPT SP+YSPSSP YSP+SP + SP Y+ +
Sbjct: 1488 SPYYPASPS---VSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAASPRYAST 1544
Query: 335 SPQFSP-STGYSPSQPGYSPSSTSQYTPQTN 246
+P F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1545 TPNFNPQSTGYSPSASGYSPTS-PVYSPTSN 1574
Score = 84.0 bits (206), Expect = 5e-15
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSP-----YSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
P+SP YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ +SP + +P+++P
Sbjct: 1492 PASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAASPRYASTTPNFNPQ 1551
Query: 335 SPQFSPS-TGYSPSQPGYSPSSTSQYTP 255
S +SPS +GYSP+ P YSP+S +P
Sbjct: 1552 STGYSPSASGYSPTSPVYSPTSNFPSSP 1579
Score = 83.2 bits (204), Expect = 8e-15
Identities = 40/73 (54%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--T 312
PS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+ +
Sbjct: 1731 PSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPS 1790
Query: 311 GYSPSQPGYSPSS 273
YSP+ P YSPSS
Sbjct: 1791 HYSPTSPAYSPSS 1803
Score = 82.8 bits (203), Expect = 1e-14
Identities = 48/96 (50%), Positives = 60/96 (62%), Gaps = 20/96 (20%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSPYNSG 360
+S YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP S
Sbjct: 1559 ASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSP 1618
Query: 359 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
SP YSP+SP +SP S YSP+ P Y+P +T Y+P
Sbjct: 1619 SSPSYSPTSPCYSPTSPSYSPTSPNYTP-ATPSYSP 1653
Score = 80.5 bits (197), Expect = 5e-14
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQF 324
PS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP++
Sbjct: 1690 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRY 1749
Query: 323 SPSTG-YSPSQPGYSPSSTSQYTP 255
SP+ YSPS YSP+S + YTP
Sbjct: 1750 SPNMSIYSPSSTKYSPTSPT-YTP 1772
Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 315
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1754 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1809
Score = 65.1 bits (157), Expect = 2e-09
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 16/85 (18%)
Frame = -3
Query: 479 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 330
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 1447 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPSYSPTSP 1506
Query: 329 QFSPST------GYSPSQPGYSPSS 273
++ S+ YSPS P YSP+S
Sbjct: 1507 NYTASSPGGASPNYSPSSPNYSPTS 1531
Score = 62.8 bits (151), Expect = 1e-08
Identities = 30/40 (75%), Positives = 35/40 (87%), Gaps = 2/40 (5%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 372
P+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1765 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1804
[135][TOP]
>UniRef100_Q9XZS1 DNA-directed RNA polymerase n=1 Tax=Drosophila guanche
RepID=Q9XZS1_DROGU
Length = 1889
Score = 103 bits (257), Expect = 6e-21
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
P + YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P+T
Sbjct: 1669 PGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPS 1728
Query: 308 YSPSQPGYSPSSTSQYTPQTNDQDERG 228
YSP+ P YS S Y+P + + G
Sbjct: 1729 YSPTSPNYSAS--PHYSPASPAYSQTG 1753
Score = 101 bits (252), Expect = 2e-20
Identities = 47/78 (60%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S
Sbjct: 1682 PNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPH 1741
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YS + ++Y+P
Sbjct: 1742 YSPASPAYSQTG-AKYSP 1758
Score = 94.4 bits (233), Expect = 4e-18
Identities = 51/93 (54%), Positives = 62/93 (66%), Gaps = 16/93 (17%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSPQ 327
P+SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P++P N SP YSP+SP
Sbjct: 1689 PTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPA 1748
Query: 326 FSPS-TGYSPSQPGYSPSSTS--------QYTP 255
+S + YSP+ P YSP S S QYTP
Sbjct: 1749 YSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 88.2 bits (217), Expect = 3e-16
Identities = 52/108 (48%), Positives = 65/108 (60%), Gaps = 31/108 (28%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSPY 369
P+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1710 PTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPS 1769
Query: 368 NSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 255
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1770 YDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 22/99 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP-------- 351
P SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1774 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSI 1833
Query: 350 ------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 255
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1834 YSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 83.2 bits (204), Expect = 8e-15
Identities = 47/91 (51%), Positives = 58/91 (63%), Gaps = 13/91 (14%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPT------------SPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
SPY P SP+ SPSYSPT SP+YSPSSP YSP+SP + SP Y+ +
Sbjct: 1566 SPYYPASPS---VSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAPSPRYAST 1622
Query: 335 SPQFSP-STGYSPSQPGYSPSSTSQYTPQTN 246
+P F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1623 TPNFNPQSTGYSPSASGYSPTS-PVYSPTSN 1652
Score = 83.2 bits (204), Expect = 8e-15
Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSP-----YSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
P+SP YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ SP + +P+++P
Sbjct: 1570 PASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQ 1629
Query: 335 SPQFSPS-TGYSPSQPGYSPSSTSQYTP 255
S +SPS +GYSP+ P YSP+S +P
Sbjct: 1630 STGYSPSASGYSPTSPVYSPTSNFPSSP 1657
Score = 83.2 bits (204), Expect = 8e-15
Identities = 40/73 (54%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--T 312
PS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+ +
Sbjct: 1809 PSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPS 1868
Query: 311 GYSPSQPGYSPSS 273
YSP+ P YSPSS
Sbjct: 1869 HYSPTSPAYSPSS 1881
Score = 82.8 bits (203), Expect = 1e-14
Identities = 48/96 (50%), Positives = 60/96 (62%), Gaps = 20/96 (20%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSPYNSG 360
+S YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP S
Sbjct: 1637 ASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSP 1696
Query: 359 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
SP YSP+SP +SP S YSP+ P Y+P +T Y+P
Sbjct: 1697 SSPSYSPTSPCYSPTSPSYSPTSPNYTP-ATPSYSP 1731
Score = 80.5 bits (197), Expect = 5e-14
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQF 324
PS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP++
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRY 1827
Query: 323 SPSTG-YSPSQPGYSPSSTSQYTP 255
SP+ YSPS YSP+S + YTP
Sbjct: 1828 SPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 77.4 bits (189), Expect = 5e-13
Identities = 53/133 (39%), Positives = 60/133 (45%), Gaps = 55/133 (41%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSP----------------------------SYSPTSP--------- 414
S YSP+SPNYSPTSP YSPTSP
Sbjct: 1595 SPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFP 1654
Query: 413 -----------------SYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPG 288
+YSPSS YSP+SP S SP YSPSSP +SP S YSP+ P
Sbjct: 1655 SSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPS 1714
Query: 287 YSPSSTSQYTPQT 249
YSP+S + YTP T
Sbjct: 1715 YSPTSPN-YTPAT 1726
Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 315
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1832 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 65.5 bits (158), Expect = 2e-09
Identities = 38/91 (41%), Positives = 50/91 (54%), Gaps = 16/91 (17%)
Frame = -3
Query: 479 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 330
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPSYSPTSP 1584
Query: 329 QFSPST------GYSPSQPGYSPSSTSQYTP 255
++ S+ YSPS P YSP+S P
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTSPLYAAP 1615
Score = 62.8 bits (151), Expect = 1e-08
Identities = 30/40 (75%), Positives = 35/40 (87%), Gaps = 2/40 (5%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 372
P+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1843 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
[136][TOP]
>UniRef100_Q29IN2 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura
pseudoobscura RepID=Q29IN2_DROPS
Length = 1889
Score = 103 bits (257), Expect = 6e-21
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
P + YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P+T
Sbjct: 1669 PGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPS 1728
Query: 308 YSPSQPGYSPSSTSQYTPQTNDQDERG 228
YSP+ P YS S Y+P + + G
Sbjct: 1729 YSPTSPNYSAS--PHYSPASPAYSQTG 1753
Score = 101 bits (252), Expect = 2e-20
Identities = 47/78 (60%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S
Sbjct: 1682 PNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPH 1741
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YS + ++Y+P
Sbjct: 1742 YSPASPAYSQTG-AKYSP 1758
Score = 94.4 bits (233), Expect = 4e-18
Identities = 51/93 (54%), Positives = 62/93 (66%), Gaps = 16/93 (17%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSPQ 327
P+SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P++P N SP YSP+SP
Sbjct: 1689 PTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPA 1748
Query: 326 FSPS-TGYSPSQPGYSPSSTS--------QYTP 255
+S + YSP+ P YSP S S QYTP
Sbjct: 1749 YSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 88.2 bits (217), Expect = 3e-16
Identities = 52/108 (48%), Positives = 65/108 (60%), Gaps = 31/108 (28%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSPY 369
P+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1710 PTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPS 1769
Query: 368 NSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 255
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1770 YDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 85.5 bits (210), Expect = 2e-15
Identities = 51/98 (52%), Positives = 59/98 (60%), Gaps = 20/98 (20%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTS--PS-----------------YSPSSPTYSPSSPYNSG 360
S+ YSP++ YSPTSP YSPTS PS YSPSS YSP+SP S
Sbjct: 1630 STGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSP 1689
Query: 359 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 249
SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1690 TSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPAT 1726
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 22/99 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP-------- 351
P SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1774 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSI 1833
Query: 350 ------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 255
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1834 YSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 84.0 bits (206), Expect = 5e-15
Identities = 47/91 (51%), Positives = 58/91 (63%), Gaps = 13/91 (14%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPT------------SPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
SPY P SP+ SPSYSPT SP+YSPSSP YSP+SP + SP Y+ +
Sbjct: 1566 SPYYPASPS---VSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAASPRYAST 1622
Query: 335 SPQFSP-STGYSPSQPGYSPSSTSQYTPQTN 246
+P F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1623 TPNFNPQSTGYSPSASGYSPTS-PVYSPTSN 1652
Score = 84.0 bits (206), Expect = 5e-15
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSP-----YSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
P+SP YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ +SP + +P+++P
Sbjct: 1570 PASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAASPRYASTTPNFNPQ 1629
Query: 335 SPQFSPS-TGYSPSQPGYSPSSTSQYTP 255
S +SPS +GYSP+ P YSP+S +P
Sbjct: 1630 STGYSPSASGYSPTSPVYSPTSNFPSSP 1657
Score = 83.2 bits (204), Expect = 8e-15
Identities = 40/73 (54%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--T 312
PS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+ +
Sbjct: 1809 PSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPS 1868
Query: 311 GYSPSQPGYSPSS 273
YSP+ P YSPSS
Sbjct: 1869 HYSPTSPAYSPSS 1881
Score = 82.8 bits (203), Expect = 1e-14
Identities = 48/96 (50%), Positives = 60/96 (62%), Gaps = 20/96 (20%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSPYNSG 360
+S YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP S
Sbjct: 1637 ASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSP 1696
Query: 359 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
SP YSP+SP +SP S YSP+ P Y+P +T Y+P
Sbjct: 1697 SSPSYSPTSPCYSPTSPSYSPTSPNYTP-ATPSYSP 1731
Score = 80.5 bits (197), Expect = 5e-14
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQF 324
PS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP++
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRY 1827
Query: 323 SPSTG-YSPSQPGYSPSSTSQYTP 255
SP+ YSPS YSP+S + YTP
Sbjct: 1828 SPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 315
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1832 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 65.1 bits (157), Expect = 2e-09
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 16/85 (18%)
Frame = -3
Query: 479 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 330
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPSYSPTSP 1584
Query: 329 QFSPST------GYSPSQPGYSPSS 273
++ S+ YSPS P YSP+S
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTS 1609
Score = 62.8 bits (151), Expect = 1e-08
Identities = 30/40 (75%), Positives = 35/40 (87%), Gaps = 2/40 (5%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 372
P+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1843 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
[137][TOP]
>UniRef100_B4H2R8 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis
RepID=B4H2R8_DROPE
Length = 1804
Score = 103 bits (257), Expect = 6e-21
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
P + YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P+T
Sbjct: 1603 PGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPS 1662
Query: 308 YSPSQPGYSPSSTSQYTPQTNDQDERG 228
YSP+ P YS S Y+P + + G
Sbjct: 1663 YSPTSPNYSAS--PHYSPASPAYSQTG 1687
Score = 101 bits (252), Expect = 2e-20
Identities = 47/78 (60%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S
Sbjct: 1616 PNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPH 1675
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YS + ++Y+P
Sbjct: 1676 YSPASPAYSQTG-AKYSP 1692
Score = 94.4 bits (233), Expect = 4e-18
Identities = 51/93 (54%), Positives = 62/93 (66%), Gaps = 16/93 (17%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSPQ 327
P+SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P++P N SP YSP+SP
Sbjct: 1623 PTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPA 1682
Query: 326 FSPS-TGYSPSQPGYSPSSTS--------QYTP 255
+S + YSP+ P YSP S S QYTP
Sbjct: 1683 YSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTP 1715
Score = 90.5 bits (223), Expect = 5e-17
Identities = 45/83 (54%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Frame = -3
Query: 476 PYSPTSPNYSPTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
P +P SP+YSPTSP+Y+ + SP+YSPSSP YSP+SP + SP Y+ ++P F+P S
Sbjct: 1505 PMTPVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAASPRYASTTPNFNPQS 1564
Query: 314 TGYSPSQPGYSPSSTSQYTPQTN 246
TGYSPS GYSP+S Y+P +N
Sbjct: 1565 TGYSPSASGYSPTS-PVYSPTSN 1586
Score = 88.2 bits (217), Expect = 3e-16
Identities = 52/108 (48%), Positives = 65/108 (60%), Gaps = 31/108 (28%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSPY 369
P+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1644 PTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPS 1703
Query: 368 NSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 255
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1704 YDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1749
Score = 85.5 bits (210), Expect = 2e-15
Identities = 51/98 (52%), Positives = 59/98 (60%), Gaps = 20/98 (20%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTS--PS-----------------YSPSSPTYSPSSPYNSG 360
S+ YSP++ YSPTSP YSPTS PS YSPSS YSP+SP S
Sbjct: 1564 STGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSP 1623
Query: 359 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 249
SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1624 TSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPAT 1660
Score = 84.3 bits (207), Expect = 4e-15
Identities = 42/84 (50%), Positives = 60/84 (71%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 324
P SP YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ +SP + +P+++P S +
Sbjct: 1508 PVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGY 1567
Query: 323 SPS-TGYSPSQPGYSPSSTSQYTP 255
SPS +GYSP+ P YSP+S +P
Sbjct: 1568 SPSASGYSPTSPVYSPTSNFPSSP 1591
Score = 82.8 bits (203), Expect = 1e-14
Identities = 48/96 (50%), Positives = 60/96 (62%), Gaps = 20/96 (20%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSPYNSG 360
+S YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP S
Sbjct: 1571 ASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSP 1630
Query: 359 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
SP YSP+SP +SP S YSP+ P Y+P +T Y+P
Sbjct: 1631 SSPSYSPTSPCYSPTSPSYSPTSPNYTP-ATPSYSP 1665
Score = 80.5 bits (197), Expect = 5e-14
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQF 324
PS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP++
Sbjct: 1702 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRY 1761
Query: 323 SPSTG-YSPSQPGYSPSSTSQYTP 255
SP+ YSPS YSP+S + YTP
Sbjct: 1762 SPNMSIYSPSSTKYSPTSPT-YTP 1784
Score = 71.2 bits (173), Expect = 3e-11
Identities = 42/79 (53%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSPTSP YSP+SP +SP S YSP+ TYS +SP S YSPSS ++SP S
Sbjct: 1722 PASPKYSPTSPLYSPSSPQHSP-SNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSP 1780
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P+ YSP+S Y+P
Sbjct: 1781 TYTPTARNYSPTSL-MYSP 1798
Score = 64.7 bits (156), Expect = 3e-09
Identities = 30/57 (52%), Positives = 38/57 (66%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 315
PS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+S +SP+
Sbjct: 1743 PSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSLMYSPT 1799
[138][TOP]
>UniRef100_Q9XZU9 DNA-directed RNA polymerase n=1 Tax=Drosophila subobscura
RepID=Q9XZU9_DROSU
Length = 1889
Score = 102 bits (255), Expect = 1e-20
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
P + YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P+T
Sbjct: 1669 PGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPS 1728
Query: 308 YSPSQPGYSPSSTSQYTPQTNDQDERG 228
YSP+ P YS S Y+P + + G
Sbjct: 1729 YSPTSPNYSAS--PHYSPASPAYSQTG 1753
Score = 102 bits (255), Expect = 1e-20
Identities = 48/78 (61%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSP+SPSYSPTSP YSPSSP+YSP+SP + +P YSP+SP +S S
Sbjct: 1682 PNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSASPH 1741
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YS + ++Y+P
Sbjct: 1742 YSPASPAYSQTG-AKYSP 1758
Score = 92.8 bits (229), Expect = 1e-17
Identities = 50/93 (53%), Positives = 62/93 (66%), Gaps = 16/93 (17%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSPQ 327
P+SP YSP+SP+YSPTSP YSP+SPSYSP+SP Y+P++P N SP YSP+SP
Sbjct: 1689 PTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPA 1748
Query: 326 FSPS-TGYSPSQPGYSPSSTS--------QYTP 255
+S + YSP+ P YSP S S QYTP
Sbjct: 1749 YSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 89.4 bits (220), Expect = 1e-16
Identities = 53/108 (49%), Positives = 65/108 (60%), Gaps = 31/108 (28%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSPY 369
PSSP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1710 PSSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPS 1769
Query: 368 NSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 255
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1770 YDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 22/99 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP-------- 351
P SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1774 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSI 1833
Query: 350 ------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 255
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1834 YSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 83.6 bits (205), Expect = 6e-15
Identities = 48/96 (50%), Positives = 61/96 (63%), Gaps = 20/96 (20%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSPYNSG 360
+S YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP S
Sbjct: 1637 ASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSP 1696
Query: 359 VSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 255
SP YSP+SP +SPS+ YSP+ P Y+P +T Y+P
Sbjct: 1697 SSPSYSPTSPCYSPSSPSYSPTSPNYTP-ATPSYSP 1731
Score = 83.2 bits (204), Expect = 8e-15
Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSP-----YSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
P+SP YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ SP + +P+++P
Sbjct: 1570 PASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQ 1629
Query: 335 SPQFSPS-TGYSPSQPGYSPSSTSQYTP 255
S +SPS +GYSP+ P YSP+S +P
Sbjct: 1630 STGYSPSASGYSPTSPVYSPTSNFPSSP 1657
Score = 83.2 bits (204), Expect = 8e-15
Identities = 40/73 (54%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--T 312
PS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+ +
Sbjct: 1809 PSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPS 1868
Query: 311 GYSPSQPGYSPSS 273
YSP+ P YSPSS
Sbjct: 1869 HYSPTSPAYSPSS 1881
Score = 82.4 bits (202), Expect = 1e-14
Identities = 50/96 (52%), Positives = 61/96 (63%), Gaps = 16/96 (16%)
Frame = -3
Query: 485 PSSPYSPTSPNY--SPT-SPSYSPT------------SPSYSPSSPTYSPSSPYNSGVSP 351
PSSP SP Y SP+ SPSYSPT SP+YSPSSP YSP+SP + SP
Sbjct: 1558 PSSPAPSMSPFYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAPSP 1617
Query: 350 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTN 246
Y+ ++P F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1618 RYASTTPNFNPQSTGYSPSASGYSPTS-PVYSPTSN 1652
Score = 80.5 bits (197), Expect = 5e-14
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQF 324
PS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP++
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRY 1827
Query: 323 SPSTG-YSPSQPGYSPSSTSQYTP 255
SP+ YSPS YSP+S + YTP
Sbjct: 1828 SPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 78.6 bits (192), Expect = 2e-13
Identities = 54/133 (40%), Positives = 60/133 (45%), Gaps = 55/133 (41%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSP----------------------------SYSPTSP--------- 414
S YSP+SPNYSPTSP YSPTSP
Sbjct: 1595 SPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFP 1654
Query: 413 -----------------SYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPG 288
+YSPSS YSP+SP S SP YSPSSP +SP S YSPS P
Sbjct: 1655 SSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPS 1714
Query: 287 YSPSSTSQYTPQT 249
YSP+S + YTP T
Sbjct: 1715 YSPTSPN-YTPAT 1726
Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 315
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1832 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 65.5 bits (158), Expect = 2e-09
Identities = 38/91 (41%), Positives = 50/91 (54%), Gaps = 16/91 (17%)
Frame = -3
Query: 479 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 330
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSPSYSPTSP 1584
Query: 329 QFSPST------GYSPSQPGYSPSSTSQYTP 255
++ S+ YSPS P YSP+S P
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTSPLYAAP 1615
Score = 62.8 bits (151), Expect = 1e-08
Identities = 30/40 (75%), Positives = 35/40 (87%), Gaps = 2/40 (5%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 372
P+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1843 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
[139][TOP]
>UniRef100_Q9XZS2 DNA-directed RNA polymerase n=1 Tax=Drosophila madeirensis
RepID=Q9XZS2_DROMD
Length = 1889
Score = 102 bits (255), Expect = 1e-20
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
P + YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P+T
Sbjct: 1669 PGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPS 1728
Query: 308 YSPSQPGYSPSSTSQYTPQTNDQDERG 228
YSP+ P YS S Y+P + + G
Sbjct: 1729 YSPTSPNYSAS--PHYSPASPAYSQTG 1753
Score = 102 bits (255), Expect = 1e-20
Identities = 48/78 (61%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSP+SPSYSPTSP YSPSSP+YSP+SP + +P YSP+SP +S S
Sbjct: 1682 PNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSASPH 1741
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YS + ++Y+P
Sbjct: 1742 YSPASPAYSQTG-AKYSP 1758
Score = 92.8 bits (229), Expect = 1e-17
Identities = 50/93 (53%), Positives = 62/93 (66%), Gaps = 16/93 (17%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSPQ 327
P+SP YSP+SP+YSPTSP YSP+SPSYSP+SP Y+P++P N SP YSP+SP
Sbjct: 1689 PTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPA 1748
Query: 326 FSPS-TGYSPSQPGYSPSSTS--------QYTP 255
+S + YSP+ P YSP S S QYTP
Sbjct: 1749 YSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 89.4 bits (220), Expect = 1e-16
Identities = 53/108 (49%), Positives = 65/108 (60%), Gaps = 31/108 (28%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSPY 369
PSSP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1710 PSSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPS 1769
Query: 368 NSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 255
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1770 YDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 22/99 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP-------- 351
P SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1774 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSI 1833
Query: 350 ------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 255
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1834 YSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 83.6 bits (205), Expect = 6e-15
Identities = 48/96 (50%), Positives = 61/96 (63%), Gaps = 20/96 (20%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSPYNSG 360
+S YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP S
Sbjct: 1637 ASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSP 1696
Query: 359 VSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 255
SP YSP+SP +SPS+ YSP+ P Y+P +T Y+P
Sbjct: 1697 SSPSYSPTSPCYSPSSPSYSPTSPNYTP-ATPSYSP 1731
Score = 83.2 bits (204), Expect = 8e-15
Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSP-----YSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
P+SP YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ SP + +P+++P
Sbjct: 1570 PASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQ 1629
Query: 335 SPQFSPS-TGYSPSQPGYSPSSTSQYTP 255
S +SPS +GYSP+ P YSP+S +P
Sbjct: 1630 STGYSPSASGYSPTSPVYSPTSNFPSSP 1657
Score = 83.2 bits (204), Expect = 8e-15
Identities = 40/73 (54%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--T 312
PS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+ +
Sbjct: 1809 PSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPS 1868
Query: 311 GYSPSQPGYSPSS 273
YSP+ P YSPSS
Sbjct: 1869 HYSPTSPAYSPSS 1881
Score = 82.4 bits (202), Expect = 1e-14
Identities = 50/96 (52%), Positives = 61/96 (63%), Gaps = 16/96 (16%)
Frame = -3
Query: 485 PSSPYSPTSPNY--SPT-SPSYSPT------------SPSYSPSSPTYSPSSPYNSGVSP 351
PSSP SP Y SP+ SPSYSPT SP+YSPSSP YSP+SP + SP
Sbjct: 1558 PSSPAPSMSPFYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAPSP 1617
Query: 350 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTN 246
Y+ ++P F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1618 RYASTTPNFNPQSTGYSPSASGYSPTS-PVYSPTSN 1652
Score = 80.5 bits (197), Expect = 5e-14
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQF 324
PS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP++
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRY 1827
Query: 323 SPSTG-YSPSQPGYSPSSTSQYTP 255
SP+ YSPS YSP+S + YTP
Sbjct: 1828 SPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 78.6 bits (192), Expect = 2e-13
Identities = 54/133 (40%), Positives = 60/133 (45%), Gaps = 55/133 (41%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSP----------------------------SYSPTSP--------- 414
S YSP+SPNYSPTSP YSPTSP
Sbjct: 1595 SPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFP 1654
Query: 413 -----------------SYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPG 288
+YSPSS YSP+SP S SP YSPSSP +SP S YSPS P
Sbjct: 1655 SSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPS 1714
Query: 287 YSPSSTSQYTPQT 249
YSP+S + YTP T
Sbjct: 1715 YSPTSPN-YTPAT 1726
Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 315
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1832 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 65.5 bits (158), Expect = 2e-09
Identities = 38/91 (41%), Positives = 50/91 (54%), Gaps = 16/91 (17%)
Frame = -3
Query: 479 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 330
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSPSYSPTSP 1584
Query: 329 QFSPST------GYSPSQPGYSPSSTSQYTP 255
++ S+ YSPS P YSP+S P
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTSPLYAAP 1615
Score = 62.8 bits (151), Expect = 1e-08
Identities = 30/40 (75%), Positives = 35/40 (87%), Gaps = 2/40 (5%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 372
P+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1843 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
[140][TOP]
>UniRef100_C6F0A2 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0A2_PLAFA
Length = 223
Score = 102 bits (255), Expect = 1e-20
Identities = 50/77 (64%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 44 SPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 103
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S +Y+P
Sbjct: 104 SPTSPKYSPTS-PKYSP 119
Score = 99.0 bits (245), Expect = 1e-19
Identities = 49/77 (63%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 37 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 96
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S +Y+P
Sbjct: 97 SPTSPKYSPTS-PKYSP 112
Score = 95.1 bits (235), Expect = 2e-18
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 3/74 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 312
P+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP++
Sbjct: 63 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSP 122
Query: 311 -GYSPSQPGYSPSS 273
+ + P YSP S
Sbjct: 123 VAQNIASPNYSPYS 136
Score = 92.0 bits (227), Expect = 2e-17
Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
+S Y+ SP YS TSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 30 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 89
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S +Y+P
Sbjct: 90 SPTSPKYSPTS-PKYSP 105
Score = 87.0 bits (214), Expect = 6e-16
Identities = 48/86 (55%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP YSPTSP YS P+SP YSP+SP S SP YSP+SP
Sbjct: 49 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSP 108
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
++SP S YSP+ P ++ Y+P
Sbjct: 109 KYSPTSPKYSPTSPVAQNIASPNYSP 134
Score = 74.7 bits (182), Expect = 3e-12
Identities = 45/96 (46%), Positives = 50/96 (52%), Gaps = 15/96 (15%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGVSPDYS 342
P+SP YSPTSP YSPTSP YSPTSP YSP+SP YS +SP S SP YS
Sbjct: 91 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYS 150
Query: 341 PSSPQFSPS---TGYSPSQPGYSPSSTSQYTPQTND 243
SSP + S + P P Y S Q D
Sbjct: 151 ISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 186
[141][TOP]
>UniRef100_B4PY98 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4PY98_DROYA
Length = 1889
Score = 102 bits (255), Expect = 1e-20
Identities = 48/78 (61%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSP+SPSYSPTSP YSP+SP+YSP+SP + V+P YSP+SP +S S
Sbjct: 1682 PNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPH 1741
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YS + +Y+P
Sbjct: 1742 YSPASPAYSQTGV-KYSP 1758
Score = 102 bits (254), Expect = 1e-20
Identities = 50/87 (57%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
P + YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P T
Sbjct: 1669 PGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPS 1728
Query: 308 YSPSQPGYSPSSTSQYTPQTNDQDERG 228
YSP+ P YS S Y+P + + G
Sbjct: 1729 YSPTSPNYSAS--PHYSPASPAYSQTG 1753
Score = 93.2 bits (230), Expect = 8e-18
Identities = 51/93 (54%), Positives = 61/93 (65%), Gaps = 16/93 (17%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSPQ 327
P+SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P N SP YSP+SP
Sbjct: 1689 PTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPA 1748
Query: 326 FSPS-TGYSPSQPGYSPSSTS--------QYTP 255
+S + YSP+ P YSP S S QYTP
Sbjct: 1749 YSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 88.2 bits (217), Expect = 3e-16
Identities = 52/108 (48%), Positives = 65/108 (60%), Gaps = 31/108 (28%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSPY 369
P+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1710 PTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSPS 1769
Query: 368 NSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 255
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1770 YDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 22/99 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP-------- 351
P SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1774 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSI 1833
Query: 350 ------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 255
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1834 YSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 84.3 bits (207), Expect = 4e-15
Identities = 48/93 (51%), Positives = 58/93 (62%), Gaps = 13/93 (13%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPT------------SPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
SPY P SP+ SPSYSPT SP+YSPSSP YSP+SP + SP Y+ +
Sbjct: 1566 SPYFPASPS---VSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYAST 1622
Query: 335 SPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQ 240
+P F+P STGYSPS GYSP+S Y+P N Q
Sbjct: 1623 TPNFNPQSTGYSPSSSGYSPTS-PVYSPTPNFQ 1654
Score = 84.3 bits (207), Expect = 4e-15
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSP-----YSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
P+SP YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ +SP + +P+++P
Sbjct: 1570 PASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTPNFNPQ 1629
Query: 335 SPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S +SP S+GYSP+ P YSP+ Q +P
Sbjct: 1630 STGYSPSSSGYSPTSPVYSPTPNFQSSP 1657
Score = 83.2 bits (204), Expect = 8e-15
Identities = 40/73 (54%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--T 312
PS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+ +
Sbjct: 1809 PSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPS 1868
Query: 311 GYSPSQPGYSPSS 273
YSP+ P YSPSS
Sbjct: 1869 HYSPTSPAYSPSS 1881
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/96 (51%), Positives = 59/96 (61%), Gaps = 20/96 (20%)
Frame = -3
Query: 482 SSPYSPTSPNYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSPYNSG 360
SS YSPTSP YSPT SPS YSP+S +YSP+SP+YSP+SP S
Sbjct: 1637 SSGYSPTSPVYSPTPNFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSP 1696
Query: 359 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
SP YSP+SP +SP S YSP+ P Y+P T Y+P
Sbjct: 1697 SSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 1731
Score = 80.5 bits (197), Expect = 5e-14
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQF 324
PS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP++
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRY 1827
Query: 323 SPSTG-YSPSQPGYSPSSTSQYTP 255
SP+ YSPS YSP+S + YTP
Sbjct: 1828 SPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 77.4 bits (189), Expect = 5e-13
Identities = 50/97 (51%), Positives = 59/97 (60%), Gaps = 19/97 (19%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPT-----SPSYSPS-----SP--TYSPSSPYNSGVSPDYSP 339
S+ YSP+S YSPTSP YSPT SPS++ S SP YSPSS S SP YSP
Sbjct: 1630 STGYSPSSSGYSPTSPVYSPTPNFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSP 1689
Query: 338 SSPQFSPST-GYSPSQPGYSPSSTS------QYTPQT 249
+SP +SPS+ YSP+ P YSP+S S YTP T
Sbjct: 1690 TSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1726
Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 315
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1832 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 65.1 bits (157), Expect = 2e-09
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 16/85 (18%)
Frame = -3
Query: 479 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 330
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSP 1584
Query: 329 QFSPST------GYSPSQPGYSPSS 273
++ S+ YSPS P YSP+S
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTS 1609
Score = 62.8 bits (151), Expect = 1e-08
Identities = 30/40 (75%), Positives = 35/40 (87%), Gaps = 2/40 (5%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 372
P+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1843 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
[142][TOP]
>UniRef100_B4NDK9 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4NDK9_DROWI
Length = 1890
Score = 102 bits (255), Expect = 1e-20
Identities = 48/78 (61%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSP+SPSYSPTSP YSP+SP+YSP+SP + V+P YSP+SP +S S
Sbjct: 1683 PNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPH 1742
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YS + +Y+P
Sbjct: 1743 YSPASPAYSQTGV-KYSP 1759
Score = 101 bits (251), Expect = 3e-20
Identities = 49/87 (56%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
P + YSP+S NY+P SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P T
Sbjct: 1670 PGNAYSPSSSNYTPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPS 1729
Query: 308 YSPSQPGYSPSSTSQYTPQTNDQDERG 228
YSP+ P YS S Y+P + + G
Sbjct: 1730 YSPTSPNYSAS--PHYSPASPAYSQTG 1754
Score = 93.2 bits (230), Expect = 8e-18
Identities = 51/93 (54%), Positives = 61/93 (65%), Gaps = 16/93 (17%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSPQ 327
P+SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P N SP YSP+SP
Sbjct: 1690 PTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPA 1749
Query: 326 FSPS-TGYSPSQPGYSPSSTS--------QYTP 255
+S + YSP+ P YSP S S QYTP
Sbjct: 1750 YSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1782
Score = 88.2 bits (217), Expect = 3e-16
Identities = 52/108 (48%), Positives = 65/108 (60%), Gaps = 31/108 (28%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSPY 369
P+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1711 PTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSPS 1770
Query: 368 NSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 255
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1771 YDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1816
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 22/99 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP-------- 351
P SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1775 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSI 1834
Query: 350 ------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 255
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1835 YSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1873
Score = 83.2 bits (204), Expect = 8e-15
Identities = 43/89 (48%), Positives = 61/89 (68%), Gaps = 12/89 (13%)
Frame = -3
Query: 485 PSSP-----YSPTSPNYSPTSPS------YSPTSPSYSPSSPTYSPSSPYNSGVSPDYSP 339
P+SP YSPTSPNY+ +SPS YSP+SP+YSP+SP Y+ +SP + +P+++
Sbjct: 1570 PTSPSVSPSYSPTSPNYTASSPSGGASPNYSPSSPNYSPTSPLYAATSPRYASTTPNFNL 1629
Query: 338 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S +SP S+GYSP+ P YSP+S Q +P
Sbjct: 1630 QSTGYSPSSSGYSPTSPVYSPTSNFQSSP 1658
Score = 83.2 bits (204), Expect = 8e-15
Identities = 40/73 (54%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--T 312
PS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+ +
Sbjct: 1810 PSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPS 1869
Query: 311 GYSPSQPGYSPSS 273
YSP+ P YSPSS
Sbjct: 1870 HYSPTSPAYSPSS 1882
Score = 81.6 bits (200), Expect = 2e-14
Identities = 48/96 (50%), Positives = 59/96 (61%), Gaps = 20/96 (20%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSPYNSG 360
SS YSPTSP YSPTS PS YSP+S +Y+P+SP+YSP+SP S
Sbjct: 1638 SSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYTPNSPSYSPTSPSYSP 1697
Query: 359 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
SP YSP+SP +SP S YSP+ P Y+P T Y+P
Sbjct: 1698 SSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 1732
Score = 80.5 bits (197), Expect = 5e-14
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQF 324
PS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP++
Sbjct: 1769 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRY 1828
Query: 323 SPSTG-YSPSQPGYSPSSTSQYTP 255
SP+ YSPS YSP+S + YTP
Sbjct: 1829 SPNMSIYSPSSTKYSPTSPT-YTP 1851
Score = 79.3 bits (194), Expect = 1e-13
Identities = 51/104 (49%), Positives = 59/104 (56%), Gaps = 22/104 (21%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP---- 318
PSSP SP Y PTSPS SPSYSP+SP Y+ SSP + G SP+YSPSSP +SP
Sbjct: 1558 PSSPGPSMSP-YFPTSPS---VSPSYSPTSPNYTASSP-SGGASPNYSPSSPNYSPTSPL 1612
Query: 317 ------------------STGYSPSQPGYSPSSTSQYTPQTNDQ 240
STGYSPS GYSP+S Y+P +N Q
Sbjct: 1613 YAATSPRYASTTPNFNLQSTGYSPSSSGYSPTS-PVYSPTSNFQ 1655
Score = 76.3 bits (186), Expect = 1e-12
Identities = 49/97 (50%), Positives = 59/97 (60%), Gaps = 19/97 (19%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTS-----PSYSPS-----SP--TYSPSSPYNSGVSPDYSP 339
S+ YSP+S YSPTSP YSPTS PS++ S SP YSPSS + SP YSP
Sbjct: 1631 STGYSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYTPNSPSYSP 1690
Query: 338 SSPQFSPST-GYSPSQPGYSPSSTS------QYTPQT 249
+SP +SPS+ YSP+ P YSP+S S YTP T
Sbjct: 1691 TSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1727
Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 315
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1833 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1888
Score = 65.9 bits (159), Expect = 1e-09
Identities = 40/87 (45%), Positives = 50/87 (57%), Gaps = 17/87 (19%)
Frame = -3
Query: 482 SSPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSS 333
+S +P P++SP SPS+SP P SPSSP + SP P + VSP YSP+S
Sbjct: 1524 ASSMTPGGPSFSPAAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPTSPSVSPSYSPTS 1583
Query: 332 PQF---SPSTG----YSPSQPGYSPSS 273
P + SPS G YSPS P YSP+S
Sbjct: 1584 PNYTASSPSGGASPNYSPSSPNYSPTS 1610
Score = 62.8 bits (151), Expect = 1e-08
Identities = 30/40 (75%), Positives = 35/40 (87%), Gaps = 2/40 (5%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 372
P+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1844 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1883
[143][TOP]
>UniRef100_B3NUC1 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3NUC1_DROER
Length = 1889
Score = 102 bits (255), Expect = 1e-20
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
P++ YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P T
Sbjct: 1669 PANAYSPSSANYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPS 1728
Query: 308 YSPSQPGYSPSSTSQYTPQTNDQDERG 228
YSP+ P YS S Y+P + + G
Sbjct: 1729 YSPTSPNYSAS--PHYSPASPAYSQTG 1753
Score = 102 bits (255), Expect = 1e-20
Identities = 48/78 (61%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSP+SPSYSPTSP YSP+SP+YSP+SP + V+P YSP+SP +S S
Sbjct: 1682 PNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPH 1741
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YS + +Y+P
Sbjct: 1742 YSPASPAYSQTGV-KYSP 1758
Score = 93.2 bits (230), Expect = 8e-18
Identities = 51/93 (54%), Positives = 61/93 (65%), Gaps = 16/93 (17%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSPQ 327
P+SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P N SP YSP+SP
Sbjct: 1689 PTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPA 1748
Query: 326 FSPS-TGYSPSQPGYSPSSTS--------QYTP 255
+S + YSP+ P YSP S S QYTP
Sbjct: 1749 YSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 88.2 bits (217), Expect = 3e-16
Identities = 52/108 (48%), Positives = 65/108 (60%), Gaps = 31/108 (28%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSPY 369
P+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1710 PTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSPS 1769
Query: 368 NSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 255
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1770 YDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 22/99 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP-------- 351
P SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1774 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSI 1833
Query: 350 ------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 255
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1834 YSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 83.6 bits (205), Expect = 6e-15
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSP-----YSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
P+SP YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ +SP + +P+++P
Sbjct: 1570 PASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTPNFNPQ 1629
Query: 335 SPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S +SP S+GYSP+ P YSP+ Q +P
Sbjct: 1630 STGYSPSSSGYSPTSPVYSPTPHFQSSP 1657
Score = 83.2 bits (204), Expect = 8e-15
Identities = 40/73 (54%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--T 312
PS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+ +
Sbjct: 1809 PSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPS 1868
Query: 311 GYSPSQPGYSPSS 273
YSP+ P YSPSS
Sbjct: 1869 HYSPTSPAYSPSS 1881
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/96 (51%), Positives = 59/96 (61%), Gaps = 20/96 (20%)
Frame = -3
Query: 482 SSPYSPTSPNYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSPYNSG 360
SS YSPTSP YSPT SPS YSP+S +YSP+SP+YSP+SP S
Sbjct: 1637 SSGYSPTSPVYSPTPHFQSSPSFAGSGSNIYSPANAYSPSSANYSPNSPSYSPTSPSYSP 1696
Query: 359 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
SP YSP+SP +SP S YSP+ P Y+P T Y+P
Sbjct: 1697 SSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 1731
Score = 82.4 bits (202), Expect = 1e-14
Identities = 47/93 (50%), Positives = 58/93 (62%), Gaps = 13/93 (13%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPT------------SPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
SPY P SP+ SPSYSPT SP+YSPSSP YSP+SP + SP Y+ +
Sbjct: 1566 SPYFPASPS---VSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYAST 1622
Query: 335 SPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQ 240
+P F+P STGYSPS GYSP+S Y+P + Q
Sbjct: 1623 TPNFNPQSTGYSPSSSGYSPTS-PVYSPTPHFQ 1654
Score = 80.5 bits (197), Expect = 5e-14
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQF 324
PS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP++
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRY 1827
Query: 323 SPSTG-YSPSQPGYSPSSTSQYTP 255
SP+ YSPS YSP+S + YTP
Sbjct: 1828 SPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 77.8 bits (190), Expect = 3e-13
Identities = 50/98 (51%), Positives = 59/98 (60%), Gaps = 20/98 (20%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPT-----SPS--------YSPSSPTYSPSSPYNSGVSPDYS 342
S+ YSP+S YSPTSP YSPT SPS YSP++ YSPSS S SP YS
Sbjct: 1630 STGYSPSSSGYSPTSPVYSPTPHFQSSPSFAGSGSNIYSPAN-AYSPSSANYSPNSPSYS 1688
Query: 341 PSSPQFSPST-GYSPSQPGYSPSSTS------QYTPQT 249
P+SP +SPS+ YSP+ P YSP+S S YTP T
Sbjct: 1689 PTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1726
Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 315
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1832 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 65.1 bits (157), Expect = 2e-09
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 16/85 (18%)
Frame = -3
Query: 479 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 330
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSP 1584
Query: 329 QFSPST------GYSPSQPGYSPSS 273
++ S+ YSPS P YSP+S
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTS 1609
Score = 62.8 bits (151), Expect = 1e-08
Identities = 30/40 (75%), Positives = 35/40 (87%), Gaps = 2/40 (5%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 372
P+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1843 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
[144][TOP]
>UniRef100_B3MQ29 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3MQ29_DROAN
Length = 1889
Score = 102 bits (255), Expect = 1e-20
Identities = 48/78 (61%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP+YSP+SPSYSPTSP YSP+SP+YSP+SP + V+P YSP+SP +S S
Sbjct: 1682 PNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPH 1741
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YS + +Y+P
Sbjct: 1742 YSPASPAYSQTGV-KYSP 1758
Score = 102 bits (254), Expect = 1e-20
Identities = 50/87 (57%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
P + YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P T
Sbjct: 1669 PGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPS 1728
Query: 308 YSPSQPGYSPSSTSQYTPQTNDQDERG 228
YSP+ P YS S Y+P + + G
Sbjct: 1729 YSPTSPNYSAS--PHYSPASPAYSQTG 1753
Score = 93.2 bits (230), Expect = 8e-18
Identities = 51/93 (54%), Positives = 61/93 (65%), Gaps = 16/93 (17%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSPQ 327
P+SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P N SP YSP+SP
Sbjct: 1689 PTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPA 1748
Query: 326 FSPS-TGYSPSQPGYSPSSTS--------QYTP 255
+S + YSP+ P YSP S S QYTP
Sbjct: 1749 YSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 88.2 bits (217), Expect = 3e-16
Identities = 52/108 (48%), Positives = 65/108 (60%), Gaps = 31/108 (28%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSPY 369
P+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1710 PTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSPS 1769
Query: 368 NSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 255
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1770 YDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 86.3 bits (212), Expect = 1e-15
Identities = 43/88 (48%), Positives = 62/88 (70%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSP-----YSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
P+SP YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ +SP + +P+++P
Sbjct: 1570 PASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYATTSPRYASTTPNFNPQ 1629
Query: 335 SPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S +SP S+GYSP+ P YSP+S Q +P
Sbjct: 1630 STGYSPSSSGYSPTSPVYSPTSNYQSSP 1657
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 22/99 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP-------- 351
P SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1774 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSI 1833
Query: 350 ------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 255
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1834 YSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 84.3 bits (207), Expect = 4e-15
Identities = 48/93 (51%), Positives = 59/93 (63%), Gaps = 13/93 (13%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPT------------SPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
SPY P SP+ SPSYSPT SP+YSPSSP YSP+SP + SP Y+ +
Sbjct: 1566 SPYFPASPS---VSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYATTSPRYAST 1622
Query: 335 SPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQ 240
+P F+P STGYSPS GYSP+S Y+P +N Q
Sbjct: 1623 TPNFNPQSTGYSPSSSGYSPTS-PVYSPTSNYQ 1654
Score = 83.2 bits (204), Expect = 8e-15
Identities = 40/73 (54%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--T 312
PS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+ +
Sbjct: 1809 PSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPS 1868
Query: 311 GYSPSQPGYSPSS 273
YSP+ P YSPSS
Sbjct: 1869 HYSPTSPAYSPSS 1881
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/96 (51%), Positives = 59/96 (61%), Gaps = 20/96 (20%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSPYNSG 360
SS YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP S
Sbjct: 1637 SSGYSPTSPVYSPTSNYQSSPSFAGSGSNMYSPGNAYSPSSSNYSPNSPSYSPTSPSYSP 1696
Query: 359 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
SP YSP+SP +SP S YSP+ P Y+P T Y+P
Sbjct: 1697 SSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 1731
Score = 80.5 bits (197), Expect = 5e-14
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQF 324
PS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP++
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRY 1827
Query: 323 SPSTG-YSPSQPGYSPSSTSQYTP 255
SP+ YSPS YSP+S + YTP
Sbjct: 1828 SPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 78.6 bits (192), Expect = 2e-13
Identities = 57/128 (44%), Positives = 62/128 (48%), Gaps = 49/128 (38%)
Frame = -3
Query: 485 PSSP-YSPTSP----------------------------NYSPTSPSYSPT-----SPS- 411
PSSP YSPTSP YSPTSP YSPT SPS
Sbjct: 1600 PSSPNYSPTSPLYATTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSNYQSSPSF 1659
Query: 410 -------------YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 273
YSPSS YSP+SP S SP YSPSSP +SP S YSP+ P YSP+S
Sbjct: 1660 AGSGSNMYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTS 1719
Query: 272 TSQYTPQT 249
+ YTP T
Sbjct: 1720 PN-YTPVT 1726
Score = 78.2 bits (191), Expect = 3e-13
Identities = 36/76 (47%), Positives = 52/76 (68%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYS 303
S YSP+SPNYSPTSP Y+ TSP Y+ ++P ++P S S S YSP+SP +SP++ Y
Sbjct: 1595 SPNYSPSSPNYSPTSPLYATTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSNYQ 1654
Query: 302 PSQPGYSPSSTSQYTP 255
S P ++ S ++ Y+P
Sbjct: 1655 -SSPSFAGSGSNMYSP 1669
Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 315
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1832 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 65.1 bits (157), Expect = 2e-09
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 16/85 (18%)
Frame = -3
Query: 479 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 330
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSP 1584
Query: 329 QFSPST------GYSPSQPGYSPSS 273
++ S+ YSPS P YSP+S
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTS 1609
Score = 62.8 bits (151), Expect = 1e-08
Identities = 30/40 (75%), Positives = 35/40 (87%), Gaps = 2/40 (5%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 372
P+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1843 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
[145][TOP]
>UniRef100_Q5EXZ8 RNA polymerase II largest subunit (Fragment) n=1 Tax=Periplaneta
americana RepID=Q5EXZ8_PERAM
Length = 97
Score = 101 bits (252), Expect = 2e-20
Identities = 47/71 (66%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GY 306
S+ YSP+SP+YSPTSP+YSPTSP YSPSS YSP+SP + SP+YSPSSP +SP+ GY
Sbjct: 20 STRYSPSSPSYSPTSPTYSPTSPQYSPSSSKYSPTSPTYTPTSPNYSPSSPTYSPAVPGY 79
Query: 305 SPSQPGYSPSS 273
SP+ P YSP+S
Sbjct: 80 SPTSPTYSPTS 90
Score = 95.9 bits (237), Expect = 1e-18
Identities = 51/87 (58%), Positives = 64/87 (73%), Gaps = 10/87 (11%)
Frame = -3
Query: 485 PSSP-YSPTSP--------NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 333
P+SP YSP+SP YSP+SPSYSPTSP+YSP+SP YSPSS S SP Y+P+S
Sbjct: 3 PTSPSYSPSSPQHTPSASTRYSPSSPSYSPTSPTYSPTSPQYSPSSSKYSPTSPTYTPTS 62
Query: 332 PQFSPST-GYSPSQPGYSPSSTSQYTP 255
P +SPS+ YSP+ PGYSP+S + Y+P
Sbjct: 63 PNYSPSSPTYSPAVPGYSPTSPT-YSP 88
Score = 84.0 bits (206), Expect = 5e-15
Identities = 42/70 (60%), Positives = 55/70 (78%), Gaps = 2/70 (2%)
Frame = -3
Query: 452 YSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSGVSPDYSPSSPQFSPSTG-YSPSQPGYSP 279
YSPTSPSYSP+SP ++PS+ T YSPSSP S SP YSP+SPQ+SPS+ YSP+ P Y+P
Sbjct: 1 YSPTSPSYSPSSPQHTPSASTRYSPSSPSYSPTSPTYSPTSPQYSPSSSKYSPTSPTYTP 60
Query: 278 SSTSQYTPQT 249
+S + Y+P +
Sbjct: 61 TSPN-YSPSS 69
Score = 80.5 bits (197), Expect = 5e-14
Identities = 37/55 (67%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 324
P+SP YSP+S YSPTSP+Y+PTSP+YSPSSPTYSP+ P S SP YSP+SP +
Sbjct: 39 PTSPQYSPSSSKYSPTSPTYTPTSPNYSPSSPTYSPAVPGYSPTSPTYSPTSPAY 93
[146][TOP]
>UniRef100_B4JXA6 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4JXA6_DROGR
Length = 1889
Score = 101 bits (251), Expect = 3e-20
Identities = 47/78 (60%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSP SP+YSP+SPSYSPTSP YSP+SP+YSP+SP + V+P YSP+SP +S S
Sbjct: 1682 PNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVTPSYSPTSPNYSASPH 1741
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YS + +Y+P
Sbjct: 1742 YSPASPAYSQTGV-KYSP 1758
Score = 97.4 bits (241), Expect = 4e-19
Identities = 48/87 (55%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
P + YSP+S NYSP SPSYSP SPSYSPSSP+YSP+SP S SP YSP+SP+++ T
Sbjct: 1669 PGNAYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVTPS 1728
Query: 308 YSPSQPGYSPSSTSQYTPQTNDQDERG 228
YSP+ P YS S Y+P + + G
Sbjct: 1729 YSPTSPNYSAS--PHYSPASPAYSQTG 1753
Score = 92.0 bits (227), Expect = 2e-17
Identities = 53/94 (56%), Positives = 62/94 (65%), Gaps = 17/94 (18%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSS-------PTYSPSSPYNSGVSPDYSPSSP 330
P SP YSP+SP+YSPTSP YSPTSPSYSP+S P+YSP+SP N SP YSP+SP
Sbjct: 1689 PMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVTPSYSPTSP-NYSASPHYSPASP 1747
Query: 329 QFSPS-TGYSPSQPGYSPSSTS--------QYTP 255
+S + YSP+ P YSP S S QYTP
Sbjct: 1748 AYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 88.6 bits (218), Expect = 2e-16
Identities = 47/85 (55%), Positives = 57/85 (67%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGV--SPDYSPSSPQFSP-S 315
P+SP SP+YSP SP+YS T YSP+SPTYSP SP G SP Y+P SPQ+SP S
Sbjct: 1731 PTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPAS 1790
Query: 314 TGYSPSQPGYSPSS-----TSQYTP 255
YSP+ P YSPSS ++QY+P
Sbjct: 1791 PKYSPTSPLYSPSSPQHSPSNQYSP 1815
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 22/99 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP-------- 351
P SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1774 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSI 1833
Query: 350 ------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 255
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1834 YSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 83.2 bits (204), Expect = 8e-15
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSP-----YSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
P+SP YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ +SP + +P+++
Sbjct: 1570 PASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYTATSPRYASATPNFNAQ 1629
Query: 335 SPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S +SP S+GYSP+ P YSP+S Q +P
Sbjct: 1630 STGYSPSSSGYSPTSPVYSPTSNFQSSP 1657
Score = 83.2 bits (204), Expect = 8e-15
Identities = 40/73 (54%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--T 312
PS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+ +
Sbjct: 1809 PSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPS 1868
Query: 311 GYSPSQPGYSPSS 273
YSP+ P YSPSS
Sbjct: 1869 HYSPTSPAYSPSS 1881
Score = 82.0 bits (201), Expect = 2e-14
Identities = 47/93 (50%), Positives = 58/93 (62%), Gaps = 13/93 (13%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPT------------SPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
SPY P SP+ SPSYSPT SP+YSPSSP YSP+SP + SP Y+ +
Sbjct: 1566 SPYFPASPS---VSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYTATSPRYASA 1622
Query: 335 SPQF-SPSTGYSPSQPGYSPSSTSQYTPQTNDQ 240
+P F + STGYSPS GYSP+S Y+P +N Q
Sbjct: 1623 TPNFNAQSTGYSPSSSGYSPTS-PVYSPTSNFQ 1654
Score = 80.5 bits (197), Expect = 5e-14
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQF 324
PS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP++
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRY 1827
Query: 323 SPSTG-YSPSQPGYSPSSTSQYTP 255
SP+ YSPS YSP+S + YTP
Sbjct: 1828 SPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 79.0 bits (193), Expect = 2e-13
Identities = 48/96 (50%), Positives = 58/96 (60%), Gaps = 20/96 (20%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSPYNSG 360
SS YSPTSP YSPTS PS YSP+S +YSP+SP+YSP SP S
Sbjct: 1637 SSGYSPTSPVYSPTSNFQSSPSFAGSGSNLYSPGNAYSPSSSNYSPNSPSYSPMSPSYSP 1696
Query: 359 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
SP YSP+SP +SP S YSP+ P Y+ + T Y+P
Sbjct: 1697 SSPSYSPTSPCYSPTSPSYSPTSPKYT-AVTPSYSP 1731
Score = 75.9 bits (185), Expect = 1e-12
Identities = 47/98 (47%), Positives = 55/98 (56%), Gaps = 20/98 (20%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPT-------YSPSSPYNSGVSPDYSP----- 339
S YSP+SPNYSPTSP Y+ TSP Y+ ++P YSPSS S SP YSP
Sbjct: 1595 SPNYSPSSPNYSPTSPLYTATSPRYASATPNFNAQSTGYSPSSSGYSPTSPVYSPTSNFQ 1654
Query: 338 SSPQF--------SPSTGYSPSQPGYSPSSTSQYTPQT 249
SSP F SP YSPS YSP+S S Y+P +
Sbjct: 1655 SSPSFAGSGSNLYSPGNAYSPSSSNYSPNSPS-YSPMS 1691
Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 315
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1832 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 65.1 bits (157), Expect = 2e-09
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 16/85 (18%)
Frame = -3
Query: 479 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 330
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSP 1584
Query: 329 QFSPST------GYSPSQPGYSPSS 273
++ S+ YSPS P YSP+S
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTS 1609
Score = 62.8 bits (151), Expect = 1e-08
Identities = 30/40 (75%), Positives = 35/40 (87%), Gaps = 2/40 (5%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 372
P+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1843 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
[147][TOP]
>UniRef100_UPI00017B0A92 UPI00017B0A92 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B0A92
Length = 1714
Score = 100 bits (249), Expect = 5e-20
Identities = 53/86 (61%), Positives = 62/86 (72%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS------GVSPDYSPSSP 330
P SP Y+P SP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP
Sbjct: 1579 PRSPGGYTPQSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSGPTSPSYSPTSP 1638
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + YTP
Sbjct: 1639 SYSPTSPSYSPTSPSYSPTSPN-YTP 1663
Score = 95.9 bits (237), Expect = 1e-18
Identities = 51/97 (52%), Positives = 63/97 (64%), Gaps = 20/97 (20%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP--------------------YN 366
P+SP PTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP Y+
Sbjct: 1622 PTSPSGPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPPHQLVPTSPYTPHISVYS 1681
Query: 365 SGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 255
SP YSP+SP+ S YSP+ PGYSP+S + Y+P
Sbjct: 1682 PPTSPTYSPTSPKGST---YSPTSPGYSPTSPT-YSP 1714
Score = 94.7 bits (234), Expect = 3e-18
Identities = 49/90 (54%), Positives = 63/90 (70%), Gaps = 13/90 (14%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPS------YSPSSPTYSPSSPYNSGVSPDYSPSSPQ 327
P+SP YSPTSP+YSPTSPSYSPTSPS YSP+SP+YSP+SP S SP YSP+SP
Sbjct: 1601 PTSPSYSPTSPSYSPTSPSYSPTSPSGPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN 1660
Query: 326 FS------PSTGYSPSQPGYSPSSTSQYTP 255
++ P++ Y+P YSP ++ Y+P
Sbjct: 1661 YTPPHQLVPTSPYTPHISVYSPPTSPTYSP 1690
Score = 94.4 bits (233), Expect = 4e-18
Identities = 51/97 (52%), Positives = 61/97 (62%), Gaps = 20/97 (20%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPTSPS---------------YSPTSPSYSPSSPTYSPSSPYN 366
P+SPY P+ SPNYSPTSP+ YSPTSPSYSP+SP+YSP+SP
Sbjct: 1554 PASPYIPSPGGAMSPNYSPTSPAYEPRSPGGYTPQSPGYSPTSPSYSPTSPSYSPTSPSY 1613
Query: 365 SGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP S YSP+ P YSP+S S Y+P
Sbjct: 1614 SPTSPSYSPTSPSGPTSPSYSPTSPSYSPTSPS-YSP 1649
Score = 57.8 bits (138), Expect = 4e-07
Identities = 45/94 (47%), Positives = 55/94 (58%), Gaps = 18/94 (19%)
Frame = -3
Query: 482 SSPYSPT-SPNYSPT--SP-SYSPTSPSYSPS-----SPTYSPSSPY--------NSGVS 354
+S +SP SP +SPT SP S P SP Y PS SP YSP+SP + S
Sbjct: 1531 ASGFSPGYSPAWSPTPGSPGSPGPASP-YIPSPGGAMSPNYSPTSPAYEPRSPGGYTPQS 1589
Query: 353 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
P YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1590 PGYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1622
[148][TOP]
>UniRef100_C6F1E9 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1E9_PLAVI
Length = 225
Score = 100 bits (249), Expect = 5e-20
Identities = 49/72 (68%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SPS+
Sbjct: 65 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSP 124
Query: 308 Y--SPSQPGYSP 279
+PS P YSP
Sbjct: 125 VPNNPSSPHYSP 136
Score = 99.8 bits (247), Expect = 9e-20
Identities = 49/79 (62%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 112
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P YSPSS P +
Sbjct: 113 SPTSPQYSPSSPVPNNPSS 131
Score = 99.0 bits (245), Expect = 1e-19
Identities = 48/77 (62%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 60 SPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQY 119
Query: 305 SPSQPGYSPSSTSQYTP 255
SPS P + S+ Y+P
Sbjct: 120 SPSSPVPNNPSSPHYSP 136
Score = 92.0 bits (227), Expect = 2e-17
Identities = 46/76 (60%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 297
+S SP YS TSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S YSP+
Sbjct: 49 HSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 108
Query: 296 QPGYSPSSTSQYTPQT 249
P YSP+S QY+P +
Sbjct: 109 SPKYSPTS-PQYSPSS 123
Score = 75.9 bits (185), Expect = 1e-12
Identities = 47/90 (52%), Positives = 52/90 (57%), Gaps = 20/90 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY-NSGVSPDYSP--------- 339
P+SP YSPTSP YSPTSP YSPTSP YSP+SP YSPSSP N+ SP YSP
Sbjct: 86 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSPYAIASPKFS 145
Query: 338 --------SSPQFSPS-TGYSPSQPGYSPS 276
SSP + S S SQ SP+
Sbjct: 146 PTSPAYSISSPVYDQSGNARSKSQHPLSPA 175
[149][TOP]
>UniRef100_B4L732 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4L732_DROMO
Length = 1889
Score = 100 bits (249), Expect = 5e-20
Identities = 47/78 (60%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSP SP+YSP+SPSYSPTSP YSP+SP+YSP+SP + V+P YSP+SP +S S
Sbjct: 1682 PNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPH 1741
Query: 308 YSPSQPGYSPSSTSQYTP 255
YSP+ P YS + +Y+P
Sbjct: 1742 YSPASPAYSQTGV-KYSP 1758
Score = 100 bits (248), Expect = 7e-20
Identities = 49/87 (56%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
P + YSP+S NYSP SPSYSP SPSYSPSSP+YSP+SP S SP YSP+SP ++P T
Sbjct: 1669 PGNAYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPS 1728
Query: 308 YSPSQPGYSPSSTSQYTPQTNDQDERG 228
YSP+ P YS S Y+P + + G
Sbjct: 1729 YSPTSPNYSAS--PHYSPASPAYSQTG 1753
Score = 92.4 bits (228), Expect = 1e-17
Identities = 51/93 (54%), Positives = 60/93 (64%), Gaps = 16/93 (17%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSPQ 327
P SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P N SP YSP+SP
Sbjct: 1689 PMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPA 1748
Query: 326 FSPS-TGYSPSQPGYSPSSTS--------QYTP 255
+S + YSP+ P YSP S S QYTP
Sbjct: 1749 YSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 88.2 bits (217), Expect = 3e-16
Identities = 52/108 (48%), Positives = 65/108 (60%), Gaps = 31/108 (28%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSPY 369
P+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1710 PTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSPS 1769
Query: 368 NSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 255
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1770 YDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 86.7 bits (213), Expect = 7e-16
Identities = 52/98 (53%), Positives = 60/98 (61%), Gaps = 20/98 (20%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPT-----SPS--------------YSPSSPTYSPSSPYNSG 360
S+ YSP+S YSPTSP YSPT SPS YSPSS YSP+SP S
Sbjct: 1630 STGYSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYSPNSPSYSP 1689
Query: 359 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 249
+SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1690 MSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1726
Score = 86.3 bits (212), Expect = 1e-15
Identities = 43/88 (48%), Positives = 62/88 (70%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSP-----YSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
P+SP YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ +SP + +P+++P
Sbjct: 1570 PASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASTSPRYASTTPNFNPQ 1629
Query: 335 SPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S +SP S+GYSP+ P YSP+S Q +P
Sbjct: 1630 STGYSPSSSGYSPTSPVYSPTSNFQSSP 1657
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 22/99 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP-------- 351
P SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1774 PGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSI 1833
Query: 350 ------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 255
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1834 YSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 85.1 bits (209), Expect = 2e-15
Identities = 48/93 (51%), Positives = 59/93 (63%), Gaps = 13/93 (13%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPT------------SPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
SPY P SP+ SPSYSPT SP+YSPSSP YSP+SP + SP Y+ +
Sbjct: 1566 SPYFPASPS---VSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASTSPRYAST 1622
Query: 335 SPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQ 240
+P F+P STGYSPS GYSP+S Y+P +N Q
Sbjct: 1623 TPNFNPQSTGYSPSSSGYSPTS-PVYSPTSNFQ 1654
Score = 83.2 bits (204), Expect = 8e-15
Identities = 40/73 (54%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--T 312
PS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+ +
Sbjct: 1809 PSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPS 1868
Query: 311 GYSPSQPGYSPSS 273
YSP+ P YSPSS
Sbjct: 1869 HYSPTSPAYSPSS 1881
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/96 (51%), Positives = 58/96 (60%), Gaps = 20/96 (20%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSPYNSG 360
SS YSPTSP YSPTS PS YSP+S +YSP+SP+YSP SP S
Sbjct: 1637 SSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYSPNSPSYSPMSPSYSP 1696
Query: 359 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
SP YSP+SP +SP S YSP+ P Y+P T Y+P
Sbjct: 1697 SSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 1731
Score = 80.5 bits (197), Expect = 5e-14
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQF 324
PS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP++
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRY 1827
Query: 323 SPSTG-YSPSQPGYSPSSTSQYTP 255
SP+ YSPS YSP+S + YTP
Sbjct: 1828 SPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 315
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1832 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 65.1 bits (157), Expect = 2e-09
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 16/85 (18%)
Frame = -3
Query: 479 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 330
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSP 1584
Query: 329 QFSPST------GYSPSQPGYSPSS 273
++ S+ YSPS P YSP+S
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTS 1609
Score = 62.8 bits (151), Expect = 1e-08
Identities = 30/40 (75%), Positives = 35/40 (87%), Gaps = 2/40 (5%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 372
P+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1843 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
[150][TOP]
>UniRef100_C6F1F2 RNA polymerase II (Fragment) n=1 Tax=Plasmodium cynomolgi
RepID=C6F1F2_9APIC
Length = 232
Score = 100 bits (248), Expect = 7e-20
Identities = 48/79 (60%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSPTSP YSPTSP Y PTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 60 SPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 119
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P YSP+S P +
Sbjct: 120 SPTSPQYSPTSPVPNNPSS 138
Score = 98.2 bits (243), Expect = 2e-19
Identities = 49/77 (63%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YS TSP YSPTSP YSPTSP Y P+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 112
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S QY+P
Sbjct: 113 SPTSPKYSPTS-PQYSP 128
Score = 97.1 bits (240), Expect = 6e-19
Identities = 47/72 (65%), Positives = 55/72 (76%), Gaps = 3/72 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP Y PTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SP++
Sbjct: 72 PTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSP 131
Query: 308 Y--SPSQPGYSP 279
+PS P YSP
Sbjct: 132 VPNNPSSPHYSP 143
Score = 87.8 bits (216), Expect = 3e-16
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 297
+S SP YS TSP YSPTSP YSP+SP Y P+SP S SP YSP+SP++SP S YSP+
Sbjct: 49 HSVVSPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 108
Query: 296 QPGYSPSSTSQYTP 255
P YSP+S +Y+P
Sbjct: 109 SPKYSPTS-PKYSP 121
Score = 73.9 bits (180), Expect = 5e-12
Identities = 47/105 (44%), Positives = 52/105 (49%), Gaps = 24/105 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY-NSGVSPDYSP--------- 339
P+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP N+ SP YSP
Sbjct: 93 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNNPSSPHYSPYAIASPKFS 152
Query: 338 --------SSPQFSPS-----TGYSPSQPGYSPSSTSQYTPQTND 243
SSP + S P P Y S Q D
Sbjct: 153 PTSPAYSISSPVYDQSGNARNKSQHPLSPAYILQSPVQVKQHIQD 197
Score = 68.6 bits (166), Expect = 2e-10
Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 14/87 (16%)
Frame = -3
Query: 473 YSPTSPN-------------YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 333
YSPTSP +S SP YS TSP YSP+SP YSP+SP Y P+S
Sbjct: 29 YSPTSPKNQLSEMNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSP-------KYLPTS 81
Query: 332 PQFSP-STGYSPSQPGYSPSSTSQYTP 255
P++SP S YSP+ P YSP+S +Y+P
Sbjct: 82 PKYSPTSPKYSPTSPKYSPTS-PKYSP 107
[151][TOP]
>UniRef100_O77165 DNA-directed RNA polymerase (Fragment) n=1 Tax=Breviata anathema
RepID=O77165_9EUKA
Length = 1690
Score = 99.8 bits (247), Expect = 9e-20
Identities = 49/79 (62%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP SP YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1508 PASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASP 1567
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1568 AYSPASPAYSPASPA-YSP 1585
Score = 99.8 bits (247), Expect = 9e-20
Identities = 49/79 (62%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP SP YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1529 PASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASP 1588
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1589 AYSPASPAYSPASPA-YSP 1606
Score = 99.8 bits (247), Expect = 9e-20
Identities = 49/79 (62%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP SP YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1550 PASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASP 1609
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1610 AYSPASPAYSPASPA-YSP 1627
Score = 99.8 bits (247), Expect = 9e-20
Identities = 49/79 (62%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP SP YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1571 PASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASP 1630
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P YSP+S + Y+P
Sbjct: 1631 AYSPASPAYSPASPA-YSP 1648
Score = 98.6 bits (244), Expect = 2e-19
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP SP YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP + P S
Sbjct: 1599 PASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYGPASP 1658
Query: 311 GYSPSQPGYSPSSTSQYTPQTNDQD 237
YSP+ P YSP+S + Y+P + D
Sbjct: 1659 AYSPASPAYSPASPA-YSPASPAYD 1682
Score = 98.2 bits (243), Expect = 2e-19
Identities = 49/82 (59%), Positives = 59/82 (71%), Gaps = 5/82 (6%)
Frame = -3
Query: 485 PSSP----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 318
P SP YSP SP YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP
Sbjct: 1498 PGSPAAAGYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSP 1557
Query: 317 -STGYSPSQPGYSPSSTSQYTP 255
S YSP+ P YSP+S + Y+P
Sbjct: 1558 ASPAYSPASPAYSPASPA-YSP 1578
Score = 98.2 bits (243), Expect = 2e-19
Identities = 48/79 (60%), Positives = 59/79 (74%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP SP YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1592 PASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASP 1651
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y P+ P YSP+S + Y+P
Sbjct: 1652 AYGPASPAYSPASPA-YSP 1669
Score = 94.0 bits (232), Expect = 5e-18
Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P+SP YSP SP YSP SP+YSP SP+YSP+SP YSP+SP SP YSP+SP +SP S
Sbjct: 1613 PASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYGPASPAYSPASPAYSPASP 1672
Query: 311 GYSPSQPGYSPS 276
YSP+ P Y P+
Sbjct: 1673 AYSPASPAYDPA 1684
Score = 88.6 bits (218), Expect = 2e-16
Identities = 49/86 (56%), Positives = 60/86 (69%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYS-------PTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSP SP YSP SP+YS P SP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1515 PASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASP 1574
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + Y+P
Sbjct: 1575 AYSPASPAYSPASPAYSPASPA-YSP 1599
Score = 88.6 bits (218), Expect = 2e-16
Identities = 49/86 (56%), Positives = 60/86 (69%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYS-------PTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSP SP YSP SP+YS P SP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1536 PASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASP 1595
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + Y+P
Sbjct: 1596 AYSPASPAYSPASPAYSPASPA-YSP 1620
Score = 88.6 bits (218), Expect = 2e-16
Identities = 49/86 (56%), Positives = 60/86 (69%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYS-------PTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSP SP YSP SP+YS P SP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1557 PASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASP 1616
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P YSP+S + Y+P
Sbjct: 1617 AYSPASPAYSPASPAYSPASPA-YSP 1641
Score = 87.0 bits (214), Expect = 6e-16
Identities = 48/86 (55%), Positives = 59/86 (68%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYS-------PTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSP SP YSP SP+YS P SP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1578 PASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASP 1637
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P Y P+S + Y+P
Sbjct: 1638 AYSPASPAYSPASPAYGPASPA-YSP 1662
Score = 82.0 bits (201), Expect = 2e-14
Identities = 37/61 (60%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSP SP YSP SP+YSP SP+Y P+SP YSP+SP S SP YSP+SP + P+
Sbjct: 1627 PASPAYSPASPAYSPASPAYSPASPAYGPASPAYSPASPAYSPASPAYSPASPAYDPAEP 1686
Query: 308 Y 306
Y
Sbjct: 1687 Y 1687
Score = 62.4 bits (150), Expect = 2e-08
Identities = 26/41 (63%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN 366
P+SP Y P SP YSP SP+YSP SP+YSP+SP Y P+ PY+
Sbjct: 1648 PASPAYGPASPAYSPASPAYSPASPAYSPASPAYDPAEPYD 1688
[152][TOP]
>UniRef100_C6HNU4 DNA-directed RNA polymerase II n=1 Tax=Ajellomyces capsulatus H143
RepID=C6HNU4_AJECH
Length = 668
Score = 99.8 bits (247), Expect = 9e-20
Identities = 48/89 (53%), Positives = 60/89 (67%), Gaps = 12/89 (13%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG- 309
PS SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP+SP STG
Sbjct: 546 PSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGR 605
Query: 308 -----------YSPSQPGYSPSSTSQYTP 255
Y+P+ PG+SP+S Y+P
Sbjct: 606 HLSPTSPTSPKYTPTSPGWSPTSPETYSP 634
Score = 85.9 bits (211), Expect = 1e-15
Identities = 46/93 (49%), Positives = 62/93 (66%), Gaps = 16/93 (17%)
Frame = -3
Query: 485 PSSPYSPTSPN-------------YSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGVSP 351
PSS YSPTSP +SP SP+++PTSP+YSP+SP+Y SP+SP S SP
Sbjct: 503 PSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTSP 562
Query: 350 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP+SP +SP S +SP+ P +SP+S S Y+P
Sbjct: 563 GFSPTSPSYSPTSPSFSPASPAFSPTSPS-YSP 594
Score = 80.9 bits (198), Expect = 4e-14
Identities = 46/110 (41%), Positives = 61/110 (55%), Gaps = 36/110 (32%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY-----------NSGVSPDYS 342
P+SP +SPTSP+YSPTSPS+SP SP++SP+SP+YSP+SP S SP Y+
Sbjct: 559 PTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKYT 618
Query: 341 PSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 264
P+SP +SP S GYSP+ P ++P S Q
Sbjct: 619 PTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISPRQ 668
Score = 79.7 bits (195), Expect = 9e-14
Identities = 51/109 (46%), Positives = 60/109 (55%), Gaps = 38/109 (34%)
Frame = -3
Query: 485 PSSPY--SPTSPNYSP------TSP---------------------------SYSPTSPS 411
PSSP+ SPTSP YSP TSP +YSPTSPS
Sbjct: 488 PSSPFNTSPTSPRYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPS 547
Query: 410 Y--SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 273
Y SP+SP+YSP+SP S SP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 548 YQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 596
Score = 64.3 bits (155), Expect = 4e-09
Identities = 42/82 (51%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Frame = -3
Query: 479 SPYSPTSPN--YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
SP+ SP YSP+SP + SPTSP YSPSS YSP+SP S SP + SSP FSP S
Sbjct: 475 SPHGARSPGGGYSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPASP 532
Query: 311 GYSPSQPGYSPSSTSQYTPQTN 246
++P+ P YSP+S S T+
Sbjct: 533 AFAPTSPAYSPTSPSYQQSPTS 554
[153][TOP]
>UniRef100_C0NEY2 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
RepID=C0NEY2_AJECG
Length = 1234
Score = 99.8 bits (247), Expect = 9e-20
Identities = 48/89 (53%), Positives = 60/89 (67%), Gaps = 12/89 (13%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG- 309
PS SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP+SP STG
Sbjct: 1112 PSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGR 1171
Query: 308 -----------YSPSQPGYSPSSTSQYTP 255
Y+P+ PG+SP+S Y+P
Sbjct: 1172 HLSPTSPTSPKYTPTSPGWSPTSPETYSP 1200
Score = 85.9 bits (211), Expect = 1e-15
Identities = 46/93 (49%), Positives = 62/93 (66%), Gaps = 16/93 (17%)
Frame = -3
Query: 485 PSSPYSPTSPN-------------YSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGVSP 351
PSS YSPTSP +SP SP+++PTSP+YSP+SP+Y SP+SP S SP
Sbjct: 1069 PSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTSP 1128
Query: 350 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP+SP +SP S +SP+ P +SP+S S Y+P
Sbjct: 1129 GFSPTSPSYSPTSPSFSPASPAFSPTSPS-YSP 1160
Score = 80.9 bits (198), Expect = 4e-14
Identities = 46/110 (41%), Positives = 61/110 (55%), Gaps = 36/110 (32%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY-----------NSGVSPDYS 342
P+SP +SPTSP+YSPTSPS+SP SP++SP+SP+YSP+SP S SP Y+
Sbjct: 1125 PTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKYT 1184
Query: 341 PSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 264
P+SP +SP S GYSP+ P ++P S Q
Sbjct: 1185 PTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISPRQ 1234
Score = 79.7 bits (195), Expect = 9e-14
Identities = 51/109 (46%), Positives = 60/109 (55%), Gaps = 38/109 (34%)
Frame = -3
Query: 485 PSSPY--SPTSPNYSP------TSP---------------------------SYSPTSPS 411
PSSP+ SPTSP YSP TSP +YSPTSPS
Sbjct: 1054 PSSPFNTSPTSPRYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPS 1113
Query: 410 Y--SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 273
Y SP+SP+YSP+SP S SP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1114 YQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1162
Score = 64.3 bits (155), Expect = 4e-09
Identities = 42/82 (51%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Frame = -3
Query: 479 SPYSPTSPN--YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
SP+ SP YSP+SP + SPTSP YSPSS YSP+SP S SP + SSP FSP S
Sbjct: 1041 SPHGARSPGGGYSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPASP 1098
Query: 311 GYSPSQPGYSPSSTSQYTPQTN 246
++P+ P YSP+S S T+
Sbjct: 1099 AFAPTSPAYSPTSPSYQQSPTS 1120
[154][TOP]
>UniRef100_A6QYA7 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
RepID=A6QYA7_AJECN
Length = 1747
Score = 99.8 bits (247), Expect = 9e-20
Identities = 48/89 (53%), Positives = 60/89 (67%), Gaps = 12/89 (13%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG- 309
PS SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP+SP STG
Sbjct: 1625 PSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGR 1684
Query: 308 -----------YSPSQPGYSPSSTSQYTP 255
Y+P+ PG+SP+S Y+P
Sbjct: 1685 HLSPTSPTSPKYTPTSPGWSPTSPETYSP 1713
Score = 85.9 bits (211), Expect = 1e-15
Identities = 46/93 (49%), Positives = 62/93 (66%), Gaps = 16/93 (17%)
Frame = -3
Query: 485 PSSPYSPTSPN-------------YSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGVSP 351
PSS YSPTSP +SP SP+++PTSP+YSP+SP+Y SP+SP S SP
Sbjct: 1582 PSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTSP 1641
Query: 350 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP+SP +SP S +SP+ P +SP+S S Y+P
Sbjct: 1642 GFSPTSPSYSPTSPSFSPASPAFSPTSPS-YSP 1673
Score = 80.9 bits (198), Expect = 4e-14
Identities = 46/110 (41%), Positives = 61/110 (55%), Gaps = 36/110 (32%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY-----------NSGVSPDYS 342
P+SP +SPTSP+YSPTSPS+SP SP++SP+SP+YSP+SP S SP Y+
Sbjct: 1638 PTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKYT 1697
Query: 341 PSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 264
P+SP +SP S GYSP+ P ++P S Q
Sbjct: 1698 PTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISPRQ 1747
Score = 79.7 bits (195), Expect = 9e-14
Identities = 51/109 (46%), Positives = 60/109 (55%), Gaps = 38/109 (34%)
Frame = -3
Query: 485 PSSPY--SPTSPNYSP------TSP---------------------------SYSPTSPS 411
PSSP+ SPTSP YSP TSP +YSPTSPS
Sbjct: 1567 PSSPFNTSPTSPRYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPS 1626
Query: 410 Y--SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 273
Y SP+SP+YSP+SP S SP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1627 YQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1675
Score = 64.3 bits (155), Expect = 4e-09
Identities = 42/82 (51%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Frame = -3
Query: 479 SPYSPTSPN--YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
SP+ SP YSP+SP + SPTSP YSPSS YSP+SP S SP + SSP FSP S
Sbjct: 1554 SPHGARSPGGGYSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPASP 1611
Query: 311 GYSPSQPGYSPSSTSQYTPQTN 246
++P+ P YSP+S S T+
Sbjct: 1612 AFAPTSPAYSPTSPSYQQSPTS 1633
[155][TOP]
>UniRef100_Q84KP6 DNA-directed RNA polymerase n=1 Tax=Cyanidioschyzon merolae
RepID=Q84KP6_CYAME
Length = 1819
Score = 99.4 bits (246), Expect = 1e-19
Identities = 53/87 (60%), Positives = 64/87 (73%), Gaps = 8/87 (9%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 312
P+SP SPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1638 PTSPRLVSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPSS 1697
Query: 311 ---GYSPSQP--GYSPSSTS-QYTPQT 249
YSPS P YSPSS + Y+P +
Sbjct: 1698 PNVAYSPSSPNVAYSPSSPNVAYSPSS 1724
Score = 81.6 bits (200), Expect = 2e-14
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 10/89 (11%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSY--------SPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P+ + T +SP+SP+Y SPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1618 PAGGGTGTLGAFSPSSPAYSPTSPRLVSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1677
Query: 329 QFSP-STGYSPSQPGYSPSSTS-QYTPQT 249
+SP S YSP+ P YSPSS + Y+P +
Sbjct: 1678 AYSPTSPAYSPTSPAYSPSSPNVAYSPSS 1706
Score = 79.7 bits (195), Expect = 9e-14
Identities = 55/114 (48%), Positives = 62/114 (54%), Gaps = 35/114 (30%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPS--------------------YSPSSP--TYSPSS 375
P+SP YSPTSP YSPTSP+YSP+SP+ YSPSSP YSPSS
Sbjct: 1674 PTSPAYSPTSPAYSPTSPAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSS 1733
Query: 374 PYNSGVSPD-----YSPSSPQF-----SPSTGYSPSQP--GYSPSSTSQYTPQT 249
P N SP YSPSSP SP+ YSPS P YSPSS Y+P +
Sbjct: 1734 P-NVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPVAYSPSS 1786
Score = 72.0 bits (175), Expect = 2e-11
Identities = 53/93 (56%), Positives = 59/93 (63%), Gaps = 22/93 (23%)
Frame = -3
Query: 485 PSSP---YSPTSPN--YSPTSPS--YSPTSPS--YSPSSPT--YSPSSPYNSGVSPD--- 348
PSSP YSP+SPN YSP+SP+ YSP+SP+ YSPSSP YSPSSP N SP
Sbjct: 1713 PSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSP-NVAYSPSSPN 1771
Query: 347 --YSPSSP----QFSPSTGYSPSQP--GYSPSS 273
YSPSSP SP+ YSPS P YSPSS
Sbjct: 1772 VAYSPSSPVAYSPSSPNVAYSPSSPNVAYSPSS 1804
Score = 68.9 bits (167), Expect = 2e-10
Identities = 49/86 (56%), Positives = 56/86 (65%), Gaps = 15/86 (17%)
Frame = -3
Query: 485 PSSP---YSPTSPN--YSPTSPS--YSPTSPS--YSPSSPT-YSPSSPYNSGVSPD---- 348
PSSP YSP+SPN YSP+SP+ YSP+SP+ YSPSSP YSPSSP N SP
Sbjct: 1740 PSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPVAYSPSSP-NVAYSPSSPNV 1798
Query: 347 -YSPSSPQFSPSTGYSPSQPGYSPSS 273
YSPSSP FSPS+ P YSP +
Sbjct: 1799 AYSPSSPAFSPSS------PVYSPKN 1818
[156][TOP]
>UniRef100_C6F1F0 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F0_PLAVI
Length = 218
Score = 98.6 bits (244), Expect = 2e-19
Identities = 47/70 (67%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY- 306
S YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SPS+
Sbjct: 60 SPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVP 119
Query: 305 -SPSQPGYSP 279
+PS P YSP
Sbjct: 120 NNPSSPHYSP 129
Score = 95.1 bits (235), Expect = 2e-18
Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQY 112
Query: 305 SPSQPGYSPSSTSQYTP 255
SPS P + S+ Y+P
Sbjct: 113 SPSSPVPNNPSSPHYSP 129
Score = 90.9 bits (224), Expect = 4e-17
Identities = 45/76 (59%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 297
+S SP YS TSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S YSP+
Sbjct: 49 HSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 108
Query: 296 QPGYSPSSTSQYTPQT 249
P YSPSS P +
Sbjct: 109 SPQYSPSSPVPNNPSS 124
Score = 78.2 bits (191), Expect = 3e-13
Identities = 46/99 (46%), Positives = 57/99 (57%), Gaps = 21/99 (21%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPS--------------------YSPTSPSYSPSSPTYSPSSPYNS 363
SS + T YSPTSP+ YS TSP YSP+SP YSP+SP S
Sbjct: 19 SSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYS 78
Query: 362 GVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 249
SP YSP+SP++SP S YSP+ P YSP+S QY+P +
Sbjct: 79 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PQYSPSS 116
Score = 75.9 bits (185), Expect = 1e-12
Identities = 47/90 (52%), Positives = 52/90 (57%), Gaps = 20/90 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY-NSGVSPDYSP--------- 339
P+SP YSPTSP YSPTSP YSPTSP YSP+SP YSPSSP N+ SP YSP
Sbjct: 79 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSPYAIASPKFS 138
Query: 338 --------SSPQFSPS-TGYSPSQPGYSPS 276
SSP + S S SQ SP+
Sbjct: 139 PTSPAYSISSPVYDQSGNARSKSQHPLSPA 168
[157][TOP]
>UniRef100_C1GHL1 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb18 RepID=C1GHL1_PARBD
Length = 1746
Score = 98.6 bits (244), Expect = 2e-19
Identities = 49/92 (53%), Positives = 62/92 (67%), Gaps = 15/92 (16%)
Frame = -3
Query: 485 PSSP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 315
P+SP SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP+SP S
Sbjct: 1622 PTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGS 1681
Query: 314 TG------------YSPSQPGYSPSSTSQYTP 255
TG Y+P+ PG+SP+S Y+P
Sbjct: 1682 TGRHLSPTSPTSPKYTPTSPGWSPTSPETYSP 1713
Score = 83.6 bits (205), Expect = 6e-15
Identities = 46/94 (48%), Positives = 57/94 (60%), Gaps = 23/94 (24%)
Frame = -3
Query: 485 PSSPYSPTSPN-------------YSPTSPSYSPTSPSY---------SPSSPTYSPSSP 372
PSS YSPTSP +SP SP ++PTSP+Y SP+SP+YSP+SP
Sbjct: 1582 PSSGYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSP 1641
Query: 371 YNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 273
S SP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1642 GFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1675
Score = 82.4 bits (202), Expect = 1e-14
Identities = 46/107 (42%), Positives = 61/107 (57%), Gaps = 36/107 (33%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------VSPDYS 342
P+SP +SPTSP+YSPTSPS+SP SP++SP+SP+YSP+SP G SP Y+
Sbjct: 1638 PTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYT 1697
Query: 341 PSSPQFSP------------------------STGYSPSQPGYSPSS 273
P+SP +SP S GYSP+ P +SP+S
Sbjct: 1698 PTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPTS 1744
Score = 77.4 bits (189), Expect = 5e-13
Identities = 49/88 (55%), Positives = 59/88 (67%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSPY--SPTSPNYSPTSPSYSPTSPSYS------PSSPTYSPSSPYNSGVSPDYSPSSP 330
PSSP+ SPTSP YSP+S YSPTSP S SSP +SP+SP + SP YSP+SP
Sbjct: 1567 PSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSP 1625
Query: 329 --QFSP-STGYSPSQPGYSPSSTSQYTP 255
Q SP S YSP+ PG+SP+S S Y+P
Sbjct: 1626 GYQQSPTSPSYSPTSPGFSPTSPS-YSP 1652
Score = 62.0 bits (149), Expect = 2e-08
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = -3
Query: 485 PSSPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P YSP+SP N SPTSP YSP+S YSP+SP S +SP SP +SP+SP F+P++
Sbjct: 1561 PGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMS-SPGFSPASPVFAPTS- 1617
Query: 308 YSPSQPGYSPSS 273
P YSP+S
Sbjct: 1618 -----PAYSPTS 1624
Score = 57.4 bits (137), Expect = 5e-07
Identities = 29/43 (67%), Positives = 35/43 (81%), Gaps = 4/43 (9%)
Frame = -3
Query: 485 PSSP--YSPTSPNYS--PTSPSYSPTSPSYSPSSPTYSPSSPY 369
P+SP YSPTSPN+S PTSP PTSP YSP+SPT+SP+SP+
Sbjct: 1705 PTSPETYSPTSPNFSGSPTSPG-GPTSPGYSPTSPTFSPTSPH 1746
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 10/55 (18%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSP-SYSPTSPSYS--------PSSPTYSPSSPYNSGVSP 351
P+SP Y+PTSP +SPTSP +YSPTSP++S P+SP YSP+SP S SP
Sbjct: 1691 PTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPTSP 1745
[158][TOP]
>UniRef100_C0SE75 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb03 RepID=C0SE75_PARBP
Length = 2106
Score = 98.6 bits (244), Expect = 2e-19
Identities = 49/92 (53%), Positives = 62/92 (67%), Gaps = 15/92 (16%)
Frame = -3
Query: 485 PSSP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 315
P+SP SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP+SP S
Sbjct: 1622 PTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGS 1681
Query: 314 TG------------YSPSQPGYSPSSTSQYTP 255
TG Y+P+ PG+SP+S Y+P
Sbjct: 1682 TGRHLSPTSPTSPKYTPTSPGWSPTSPETYSP 1713
Score = 83.6 bits (205), Expect = 6e-15
Identities = 46/94 (48%), Positives = 57/94 (60%), Gaps = 23/94 (24%)
Frame = -3
Query: 485 PSSPYSPTSPN-------------YSPTSPSYSPTSPSY---------SPSSPTYSPSSP 372
PSS YSPTSP +SP SP ++PTSP+Y SP+SP+YSP+SP
Sbjct: 1582 PSSGYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSP 1641
Query: 371 YNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 273
S SP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1642 GFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1675
Score = 83.2 bits (204), Expect = 8e-15
Identities = 48/107 (44%), Positives = 59/107 (55%), Gaps = 36/107 (33%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP-------------- 351
P+SP YSPTSP +SPTSPSYSPTSPS+SP+SP +SP+SP S SP
Sbjct: 1631 PTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTS 1690
Query: 350 -------------------DYSPSSPQFS--PSTGYSPSQPGYSPSS 273
YSP+SP FS P++ P+ PGYSP+S
Sbjct: 1691 PTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 1737
Score = 80.9 bits (198), Expect = 4e-14
Identities = 45/106 (42%), Positives = 60/106 (56%), Gaps = 36/106 (33%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------VSPDYS 342
P+SP +SPTSP+YSPTSPS+SP SP++SP+SP+YSP+SP G SP Y+
Sbjct: 1638 PTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYT 1697
Query: 341 PSSPQFSP------------------------STGYSPSQPGYSPS 276
P+SP +SP S GYSP+ P +SP+
Sbjct: 1698 PTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPT 1743
Score = 77.4 bits (189), Expect = 5e-13
Identities = 49/88 (55%), Positives = 59/88 (67%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSPY--SPTSPNYSPTSPSYSPTSPSYS------PSSPTYSPSSPYNSGVSPDYSPSSP 330
PSSP+ SPTSP YSP+S YSPTSP S SSP +SP+SP + SP YSP+SP
Sbjct: 1567 PSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSP 1625
Query: 329 --QFSP-STGYSPSQPGYSPSSTSQYTP 255
Q SP S YSP+ PG+SP+S S Y+P
Sbjct: 1626 GYQQSPTSPSYSPTSPGFSPTSPS-YSP 1652
Score = 71.2 bits (173), Expect = 3e-11
Identities = 36/61 (59%), Positives = 45/61 (73%), Gaps = 3/61 (4%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTY--SPSSPYNSGVSPDYSPSSPQFSPSTG 309
SP SPTSP Y+PTSP +SPTSP +YSP+SP + SP+SP SP YSP+SP FSP+
Sbjct: 1687 SPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSP-GGPTSPGYSPTSPTFSPTCS 1745
Query: 308 Y 306
+
Sbjct: 1746 F 1746
Score = 62.0 bits (149), Expect = 2e-08
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = -3
Query: 485 PSSPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P YSP+SP N SPTSP YSP+S YSP+SP S +SP SP +SP+SP F+P++
Sbjct: 1561 PGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMS-SPGFSPASPVFAPTS- 1617
Query: 308 YSPSQPGYSPSS 273
P YSP+S
Sbjct: 1618 -----PAYSPTS 1624
[159][TOP]
>UniRef100_B4MAN9 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
RepID=B4MAN9_DROVI
Length = 1889
Score = 98.2 bits (243), Expect = 2e-19
Identities = 48/87 (55%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
P + YSP+S NYS SPSYSP SPSYSPSSP+YSP+SP S SP YSP+SP ++P+T
Sbjct: 1669 PGNAYSPSSSNYSSNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPS 1728
Query: 308 YSPSQPGYSPSSTSQYTPQTNDQDERG 228
YSP+ P YS S Y+P + + G
Sbjct: 1729 YSPTSPNYSAS--PHYSPASPAYSQTG 1753
Score = 97.1 bits (240), Expect = 6e-19
Identities = 44/76 (57%), Positives = 57/76 (75%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYS 303
S YSP SP+YSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S YS
Sbjct: 1684 SPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYS 1743
Query: 302 PSQPGYSPSSTSQYTP 255
P+ P YS + +Y+P
Sbjct: 1744 PASPAYSQTGV-KYSP 1758
Score = 93.6 bits (231), Expect = 6e-18
Identities = 51/93 (54%), Positives = 61/93 (65%), Gaps = 16/93 (17%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSPQ 327
P SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P++P N SP YSP+SP
Sbjct: 1689 PMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPA 1748
Query: 326 FSPS-TGYSPSQPGYSPSSTS--------QYTP 255
+S + YSP+ P YSP S S QYTP
Sbjct: 1749 YSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 88.2 bits (217), Expect = 3e-16
Identities = 52/108 (48%), Positives = 65/108 (60%), Gaps = 31/108 (28%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSPY 369
P+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1710 PTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSPS 1769
Query: 368 NSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 255
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1770 YDGSPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 87.4 bits (215), Expect = 4e-16
Identities = 48/99 (48%), Positives = 60/99 (60%), Gaps = 22/99 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP-------- 351
P SP Y+P SP YSPTSP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1774 PGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSI 1833
Query: 350 ------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 255
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1834 YSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 85.1 bits (209), Expect = 2e-15
Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSPTSPNY+ +SP + SP+YSPSSP YSP+SP + S Y+ ++P F+P STGY
Sbjct: 1576 SPSYSPTSPNYTASSPGGA--SPNYSPSSPNYSPTSPLYTATSLRYASATPNFNPQSTGY 1633
Query: 305 SPSQPGYSPSSTSQYTPQTNDQ 240
SPS GYSP+S Y+P +N Q
Sbjct: 1634 SPSSSGYSPTS-PVYSPTSNFQ 1654
Score = 83.2 bits (204), Expect = 8e-15
Identities = 40/73 (54%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS--T 312
PS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+ +
Sbjct: 1809 PSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPS 1868
Query: 311 GYSPSQPGYSPSS 273
YSP+ P YSPSS
Sbjct: 1869 HYSPTSPAYSPSS 1881
Score = 82.4 bits (202), Expect = 1e-14
Identities = 45/84 (53%), Positives = 54/84 (64%), Gaps = 7/84 (8%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQF 324
PS SP SP Y+P SP YSPTSP YSP+SP YSPSSP + S YS +SP++
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRY 1827
Query: 323 SPSTG-YSPSQPGYSPSSTSQYTP 255
SP+ YSPS YSP+S + YTP
Sbjct: 1828 SPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 77.8 bits (190), Expect = 3e-13
Identities = 50/97 (51%), Positives = 58/97 (59%), Gaps = 19/97 (19%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTS-----PSYSPS-----SP--TYSPSSPYNSGVSPDYSP 339
S+ YSP+S YSPTSP YSPTS PS++ S SP YSPSS S SP YSP
Sbjct: 1630 STGYSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYSSNSPSYSP 1689
Query: 338 SSPQFSPST-GYSPSQPGYSPSSTS------QYTPQT 249
SP +SPS+ YSP+ P YSP+S S YTP T
Sbjct: 1690 MSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPAT 1726
Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 315
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1832 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 62.8 bits (151), Expect = 1e-08
Identities = 30/40 (75%), Positives = 35/40 (87%), Gaps = 2/40 (5%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 372
P+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1843 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 62.0 bits (149), Expect = 2e-08
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 16/85 (18%)
Frame = -3
Query: 479 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 330
S +P P++SP+ SPS+SP P SPSSP + SP + VSP YSP+SP
Sbjct: 1525 SGMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPHFSTSPSVSPSYSPTSP 1584
Query: 329 QFSPST------GYSPSQPGYSPSS 273
++ S+ YSPS P YSP+S
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTS 1609
[160][TOP]
>UniRef100_C5GKA7 DNA-directed RNA polymerase n=2 Tax=Ajellomyces dermatitidis
RepID=C5GKA7_AJEDR
Length = 1746
Score = 98.2 bits (243), Expect = 2e-19
Identities = 49/92 (53%), Positives = 62/92 (67%), Gaps = 15/92 (16%)
Frame = -3
Query: 485 PSSP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 315
P+SP SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP+SP S
Sbjct: 1621 PTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGIS 1680
Query: 314 TG------------YSPSQPGYSPSSTSQYTP 255
TG Y+P+ PG+SP+S Y+P
Sbjct: 1681 TGRHLSPTSPTSPKYTPTSPGWSPTSPETYSP 1712
Score = 84.7 bits (208), Expect = 3e-15
Identities = 46/94 (48%), Positives = 58/94 (61%), Gaps = 23/94 (24%)
Frame = -3
Query: 485 PSSPYSPTSPN-------------YSPTSPSYSPTSPSY---------SPSSPTYSPSSP 372
PSS YSPTSP +SP SP+++PTSP+Y SP+SP+YSP+SP
Sbjct: 1581 PSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPGYQQSPTSPSYSPTSP 1640
Query: 371 YNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 273
S SP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1641 GFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1674
Score = 82.0 bits (201), Expect = 2e-14
Identities = 46/110 (41%), Positives = 62/110 (56%), Gaps = 36/110 (32%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY-----------NSGVSPDYS 342
P+SP +SPTSP+YSPTSPS+SP SP++SP+SP+YSP+SP S SP Y+
Sbjct: 1637 PTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGISTGRHLSPTSPTSPKYT 1696
Query: 341 PSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 264
P+SP +SP S GYSP+ P ++P+S Q
Sbjct: 1697 PTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPTSPRQ 1746
Score = 77.8 bits (190), Expect = 3e-13
Identities = 45/96 (46%), Positives = 56/96 (58%), Gaps = 23/96 (23%)
Frame = -3
Query: 485 PSSPYSPTSP-NYSPTSPSYSP-------------------TSPSYSPSSPTYSPSSPYN 366
P YSPTSP N SPTSP YSP +SP +SP+SP ++P+SP
Sbjct: 1560 PGGGYSPTSPFNTSPTSPRYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAY 1619
Query: 365 SGVSPDY--SPSSPQFSP-STGYSPSQPGYSPSSTS 267
S SP Y SP+SP +SP S G+SP+ P YSP+S S
Sbjct: 1620 SPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPS 1655
Score = 75.9 bits (185), Expect = 1e-12
Identities = 48/88 (54%), Positives = 59/88 (67%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSPY--SPTSPNYSPTSPSYSPTSPSYS------PSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP+ SPTSP YSP+S YSPTSP S SSP +SP+SP + SP YSP+SP
Sbjct: 1566 PTSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSP 1624
Query: 329 --QFSP-STGYSPSQPGYSPSSTSQYTP 255
Q SP S YSP+ PG+SP+S S Y+P
Sbjct: 1625 GYQQSPTSPSYSPTSPGFSPTSPS-YSP 1651
Score = 64.3 bits (155), Expect = 4e-09
Identities = 41/73 (56%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
Frame = -3
Query: 479 SPYSPTSPN--YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
SP+ SP YSPTSP + SPTSP YSPSS YSP+SP S SP + SSP FSP S
Sbjct: 1553 SPHGARSPGGGYSPTSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPASP 1610
Query: 311 GYSPSQPGYSPSS 273
++P+ P YSP+S
Sbjct: 1611 AFAPTSPAYSPTS 1623
[161][TOP]
>UniRef100_O77375 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7
RepID=O77375_PLAF7
Length = 2457
Score = 97.8 bits (242), Expect = 3e-19
Identities = 47/71 (66%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 2285 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2344
Query: 305 SPSQPGYSPSS 273
SP+ P YSP+S
Sbjct: 2345 SPTSPKYSPTS 2355
Score = 96.3 bits (238), Expect = 9e-19
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 2292 SPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2351
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P ++ Y+P
Sbjct: 2352 SPTSPVAQNIASPNYSP 2368
Score = 92.0 bits (227), Expect = 2e-17
Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
+S Y+ SP YS TSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 2278 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2337
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P YSP+S +Y+P
Sbjct: 2338 SPTSPKYSPTS-PKYSP 2353
Score = 77.8 bits (190), Expect = 3e-13
Identities = 48/83 (57%), Positives = 55/83 (66%), Gaps = 13/83 (15%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGV-SPDYSP-- 339
P+SP YSPTSP YSPTSP YSPTSP YS P+SP YSP+SP + SP+YSP
Sbjct: 2311 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYS 2370
Query: 338 -SSPQFSP-STGYSPSQPGYSPS 276
+SP+FSP S YS S P Y S
Sbjct: 2371 ITSPKFSPTSPAYSISSPVYDKS 2393
Score = 74.7 bits (182), Expect = 3e-12
Identities = 42/88 (47%), Positives = 53/88 (60%), Gaps = 12/88 (13%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPS-----------YSPSSPTYSPSSPYNSGVSPDYSPS 336
S YSPTSP Y+ + YSPTSP Y+ SP YS +SP S SP YSP+
Sbjct: 2246 SPSYSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPT 2305
Query: 335 SPQFSP-STGYSPSQPGYSPSSTSQYTP 255
SP++SP S YSP+ P YSP+S +Y+P
Sbjct: 2306 SPKYSPTSPKYSPTSPKYSPTS-PKYSP 2332
Score = 74.7 bits (182), Expect = 3e-12
Identities = 45/96 (46%), Positives = 50/96 (52%), Gaps = 15/96 (15%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGVSPDYS 342
P+SP YSPTSP YSPTSP YSPTSP YSP+SP YS +SP S SP YS
Sbjct: 2325 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYS 2384
Query: 341 PSSPQFSPS---TGYSPSQPGYSPSSTSQYTPQTND 243
SSP + S + P P Y S Q D
Sbjct: 2385 ISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 2420
Score = 66.2 bits (160), Expect = 1e-09
Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 19/86 (22%)
Frame = -3
Query: 455 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------------------SGVSPDYSPSSP 330
N++ SPSYSPTSP+Y+ ++ YSP+SP N S SP YSP+SP
Sbjct: 2241 NHNIYSPSYSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSP 2300
Query: 329 QFSP-STGYSPSQPGYSPSSTSQYTP 255
++SP S YSP+ P YSP+S +Y+P
Sbjct: 2301 KYSPTSPKYSPTSPKYSPTS-PKYSP 2325
[162][TOP]
>UniRef100_C1H3Q4 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb01 RepID=C1H3Q4_PARBA
Length = 1748
Score = 97.4 bits (241), Expect = 4e-19
Identities = 48/92 (52%), Positives = 62/92 (67%), Gaps = 15/92 (16%)
Frame = -3
Query: 485 PSSP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 315
P+SP SPTSP+YSPTSP +SPTSP+YSP+SP++SP+SP S SP YSP+SP S
Sbjct: 1627 PTSPGYQQSPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPALGGS 1686
Query: 314 TG------------YSPSQPGYSPSSTSQYTP 255
TG Y+P+ PG+SP+S Y+P
Sbjct: 1687 TGRHLSPTSPTSPKYTPTSPGWSPTSPETYSP 1718
Score = 84.0 bits (206), Expect = 5e-15
Identities = 46/94 (48%), Positives = 58/94 (61%), Gaps = 23/94 (24%)
Frame = -3
Query: 485 PSSPYSPTSPN-------------YSPTSPSYSPTSPSY---------SPSSPTYSPSSP 372
PSS YSPTSP +SP SP ++PTSP+Y SP+SP+YSP+SP
Sbjct: 1587 PSSGYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSP 1646
Query: 371 YNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 273
S SP+YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1647 GFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1680
Score = 84.0 bits (206), Expect = 5e-15
Identities = 47/100 (47%), Positives = 62/100 (62%), Gaps = 29/100 (29%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------VSPDYS 342
P+SP +SPTSPNYSPTSPS+SP SP++SP+SP+YSP+SP G SP Y+
Sbjct: 1643 PTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYT 1702
Query: 341 PSSPQFSPSTG--YSPSQP---------------GYSPSS 273
P+SP +SP++ YSP+ P GYSP+S
Sbjct: 1703 PTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 1742
Score = 73.2 bits (178), Expect = 9e-12
Identities = 44/80 (55%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P YSP+SP N SPTSP YSP+S YSP+SP S +SP SP +SP+SP F+P S
Sbjct: 1566 PGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMS-SPGFSPASPVFAPTSP 1623
Query: 311 GYSPSQPGYSPSSTS-QYTP 255
YSP+ PGY S TS Y+P
Sbjct: 1624 AYSPTSPGYQQSPTSPSYSP 1643
Score = 70.5 bits (171), Expect = 6e-11
Identities = 36/58 (62%), Positives = 44/58 (75%), Gaps = 3/58 (5%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTY--SPSSPYNSGVSPDYSPSSPQFSPS 315
SP SPTSP Y+PTSP +SPTSP +YSP+SP + SP+SP SP YSP+SP FSP+
Sbjct: 1692 SPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSP-GGPTSPGYSPTSPTFSPT 1748
[163][TOP]
>UniRef100_C6F1F3 RNA polymerase II (Fragment) n=1 Tax=Plasmodium cynomolgi
RepID=C6F1F3_9APIC
Length = 225
Score = 97.1 bits (240), Expect = 6e-19
Identities = 47/72 (65%), Positives = 55/72 (76%), Gaps = 3/72 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP Y PTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SP++
Sbjct: 65 PTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSP 124
Query: 308 Y--SPSQPGYSP 279
+PS P YSP
Sbjct: 125 VPNNPSSPHYSP 136
Score = 96.3 bits (238), Expect = 9e-19
Identities = 47/79 (59%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YS TSP YSPTSP YSPTSP Y P+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 112
Query: 305 SPSQPGYSPSSTSQYTPQT 249
SP+ P YSP+S P +
Sbjct: 113 SPTSPQYSPTSPVPNNPSS 131
Score = 95.5 bits (236), Expect = 2e-18
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YSPTSP YSPTSP Y PTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 60 SPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQY 119
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P + S+ Y+P
Sbjct: 120 SPTSPVPNNPSSPHYSP 136
Score = 90.1 bits (222), Expect = 7e-17
Identities = 50/84 (59%), Positives = 58/84 (69%), Gaps = 6/84 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY-NSGVSPDYSP---SSPQFS 321
P+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP N+ SP YSP +SP+FS
Sbjct: 86 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNNPSSPHYSPYAIASPKFS 145
Query: 320 P-STGYSPSQPGYSPSSTSQYTPQ 252
P S YS S P Y S ++ Q
Sbjct: 146 PTSPAYSISSPVYDQSGNARNKSQ 169
Score = 89.4 bits (220), Expect = 1e-16
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 297
+S SP YS TSP YSPTSP YSP+SP Y P+SP S SP YSP+SP++SP S YSP+
Sbjct: 49 HSVVSPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 108
Query: 296 QPGYSPSSTSQYTP 255
P YSP+S QY+P
Sbjct: 109 SPKYSPTS-PQYSP 121
Score = 68.6 bits (166), Expect = 2e-10
Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 14/87 (16%)
Frame = -3
Query: 473 YSPTSPN-------------YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 333
YSPTSP +S SP YS TSP YSP+SP YSP+SP Y P+S
Sbjct: 29 YSPTSPKNQLSEMNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSP-------KYLPTS 81
Query: 332 PQFSP-STGYSPSQPGYSPSSTSQYTP 255
P++SP S YSP+ P YSP+S +Y+P
Sbjct: 82 PKYSPTSPKYSPTSPKYSPTS-PKYSP 107
[164][TOP]
>UniRef100_B3L428 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H
RepID=B3L428_PLAKH
Length = 2353
Score = 96.7 bits (239), Expect = 7e-19
Identities = 46/70 (65%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY- 306
S YSPTSP YSPTSP Y PTSP YSP+SP YSP+SP S SP YSP+SPQ+SP++
Sbjct: 2195 SPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPVP 2254
Query: 305 -SPSQPGYSP 279
SPS P YSP
Sbjct: 2255 NSPSSPHYSP 2264
Score = 91.7 bits (226), Expect = 2e-17
Identities = 44/77 (57%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S Y+ TSP YSPTSP YSPTSP Y P+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 2188 SPAYAVTSPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQY 2247
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P + S+ Y+P
Sbjct: 2248 SPTSPVPNSPSSPHYSP 2264
Score = 87.0 bits (214), Expect = 6e-16
Identities = 42/76 (55%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 297
+S SP Y+ TSP YSPTSP YSP+SP Y P+SP S SP YSP+SP++SP S YSP+
Sbjct: 2184 HSVLSPAYAVTSPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 2243
Query: 296 QPGYSPSSTSQYTPQT 249
P YSP+S +P +
Sbjct: 2244 SPQYSPTSPVPNSPSS 2259
Score = 80.5 bits (197), Expect = 5e-14
Identities = 46/77 (59%), Positives = 54/77 (70%), Gaps = 3/77 (3%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSGVSPDYSPSSPQFSP-S 315
P+SP YSPTSP YSPTSP YSPTSP YSP+SP SPSSP+ S Y+ +SP+FSP S
Sbjct: 2221 PTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNSPSSPHYS----PYAIASPKFSPTS 2276
Query: 314 TGYSPSQPGYSPSSTSQ 264
YS S P Y SS ++
Sbjct: 2277 PAYSISSPVYDQSSNAR 2293
[165][TOP]
>UniRef100_Q1E2G9 DNA-directed RNA polymerase n=1 Tax=Coccidioides immitis
RepID=Q1E2G9_COCIM
Length = 1750
Score = 96.7 bits (239), Expect = 7e-19
Identities = 48/94 (51%), Positives = 62/94 (65%), Gaps = 17/94 (18%)
Frame = -3
Query: 485 PSSP-----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 321
P+SP SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP+SP
Sbjct: 1623 PTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALG 1682
Query: 320 PSTG------------YSPSQPGYSPSSTSQYTP 255
+TG Y+P+ PG+SP+S Y+P
Sbjct: 1683 GATGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSP 1716
Score = 84.0 bits (206), Expect = 5e-15
Identities = 46/96 (47%), Positives = 58/96 (60%), Gaps = 25/96 (26%)
Frame = -3
Query: 485 PSSPYSPTSPN-------------YSPTSPSYSPTSPSY-----------SPSSPTYSPS 378
PSS YSPTSP +SP SP+++PTSP+Y SP+SP+YSP+
Sbjct: 1583 PSSGYSPTSPGMSITSPRYMTSPGFSPASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSPT 1642
Query: 377 SPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 273
SP S SP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1643 SPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1678
Score = 82.4 bits (202), Expect = 1e-14
Identities = 46/110 (41%), Positives = 62/110 (56%), Gaps = 36/110 (32%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGV-----------SPDYS 342
P+SP +SPTSP+YSPTSPS+SP SP++SP+SP+YSP+SP G SP Y+
Sbjct: 1641 PTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPKYT 1700
Query: 341 PSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 264
P+SP +SP S GYSP+ P ++P+S Q
Sbjct: 1701 PTSPGWSPTSPEAYSPTSPNFAGSPTSPGGPTSPGYSPTSPTFNPTSPRQ 1750
Score = 78.2 bits (191), Expect = 3e-13
Identities = 47/92 (51%), Positives = 58/92 (63%), Gaps = 19/92 (20%)
Frame = -3
Query: 485 PSSPY--SPTSPNYSP------TSPSYSPTSPSY------SPSSPTYSPSSPYNSGVSPD 348
P+SP+ SPTSP YSP TSP S TSP Y SP+SPT++P+SP S SP
Sbjct: 1568 PTSPFNTSPTSPGYSPSSGYSPTSPGMSITSPRYMTSPGFSPASPTFAPTSPAYSPTSPG 1627
Query: 347 Y----SPSSPQFSP-STGYSPSQPGYSPSSTS 267
Y SP+SP +SP S G+SP+ P YSP+S S
Sbjct: 1628 YGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPS 1659
Score = 63.2 bits (152), Expect = 9e-09
Identities = 41/72 (56%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Frame = -3
Query: 479 SPYSPTSPN-YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
SP SP YSPTSP + SPTSP YSPSS YSP+SP S SP Y +SP FSP S
Sbjct: 1556 SPAGARSPGGYSPTSPFNTSPTSPGYSPSSG-YSPTSPGMSITSPRYM-TSPGFSPASPT 1613
Query: 308 YSPSQPGYSPSS 273
++P+ P YSP+S
Sbjct: 1614 FAPTSPAYSPTS 1625
Score = 53.5 bits (127), Expect = 7e-06
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTS--------PSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P S +SP S T P + SP+ + S YSP+SP+N+ SP+SP
Sbjct: 1526 PDSQFSPIGQTGSETPAGFTEYQPPGFGGFSPAGARSPGGYSPTSPFNT------SPTSP 1579
Query: 329 QFSPSTGYSPSQPGYSPSSTSQYT 258
+SPS+GYSP+ PG S +S T
Sbjct: 1580 GYSPSSGYSPTSPGMSITSPRYMT 1603
[166][TOP]
>UniRef100_C5PAJ4 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735 delta
SOWgp RepID=C5PAJ4_COCP7
Length = 1746
Score = 96.7 bits (239), Expect = 7e-19
Identities = 48/94 (51%), Positives = 62/94 (65%), Gaps = 17/94 (18%)
Frame = -3
Query: 485 PSSP-----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 321
P+SP SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP+SP
Sbjct: 1623 PTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALG 1682
Query: 320 PSTG------------YSPSQPGYSPSSTSQYTP 255
+TG Y+P+ PG+SP+S Y+P
Sbjct: 1683 GATGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSP 1716
Score = 84.0 bits (206), Expect = 5e-15
Identities = 46/96 (47%), Positives = 58/96 (60%), Gaps = 25/96 (26%)
Frame = -3
Query: 485 PSSPYSPTSPN-------------YSPTSPSYSPTSPSY-----------SPSSPTYSPS 378
PSS YSPTSP +SP SP+++PTSP+Y SP+SP+YSP+
Sbjct: 1583 PSSGYSPTSPGMSITSPRYMTSPGFSPASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSPT 1642
Query: 377 SPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 273
SP S SP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1643 SPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1678
Score = 79.7 bits (195), Expect = 9e-14
Identities = 44/106 (41%), Positives = 60/106 (56%), Gaps = 36/106 (33%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGV-----------SPDYS 342
P+SP +SPTSP+YSPTSPS+SP SP++SP+SP+YSP+SP G SP Y+
Sbjct: 1641 PTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPKYT 1700
Query: 341 PSSPQFSP------------------------STGYSPSQPGYSPS 276
P+SP +SP S GYSP+ P ++P+
Sbjct: 1701 PTSPGWSPTSPEAYSPTSPNFAGSPTSPGGPTSPGYSPTSPTFNPT 1746
Score = 79.7 bits (195), Expect = 9e-14
Identities = 47/93 (50%), Positives = 61/93 (65%), Gaps = 22/93 (23%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYS---------------PSSPT---YSPSSPYNS 363
P+SP YSPTSP++SP SP++SPTSPSYS P+SPT Y+P+SP S
Sbjct: 1648 PTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPKYTPTSPGWS 1707
Query: 362 GVSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 273
SP+ YSP+SP F SP++ P+ PGYSP+S
Sbjct: 1708 PTSPEAYSPTSPNFAGSPTSPGGPTSPGYSPTS 1740
Score = 78.2 bits (191), Expect = 3e-13
Identities = 47/92 (51%), Positives = 58/92 (63%), Gaps = 19/92 (20%)
Frame = -3
Query: 485 PSSPY--SPTSPNYSP------TSPSYSPTSPSY------SPSSPTYSPSSPYNSGVSPD 348
P+SP+ SPTSP YSP TSP S TSP Y SP+SPT++P+SP S SP
Sbjct: 1568 PTSPFNTSPTSPGYSPSSGYSPTSPGMSITSPRYMTSPGFSPASPTFAPTSPAYSPTSPG 1627
Query: 347 Y----SPSSPQFSP-STGYSPSQPGYSPSSTS 267
Y SP+SP +SP S G+SP+ P YSP+S S
Sbjct: 1628 YGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPS 1659
Score = 63.2 bits (152), Expect = 9e-09
Identities = 41/72 (56%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Frame = -3
Query: 479 SPYSPTSPN-YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
SP SP YSPTSP + SPTSP YSPSS YSP+SP S SP Y +SP FSP S
Sbjct: 1556 SPAGARSPGGYSPTSPFNTSPTSPGYSPSSG-YSPTSPGMSITSPRYM-TSPGFSPASPT 1613
Query: 308 YSPSQPGYSPSS 273
++P+ P YSP+S
Sbjct: 1614 FAPTSPAYSPTS 1625
Score = 53.5 bits (127), Expect = 7e-06
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTS--------PSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P S +SP S T P + SP+ + S YSP+SP+N+ SP+SP
Sbjct: 1526 PDSQFSPIGQTGSETPAGFTEYQPPGFGGFSPAGARSPGGYSPTSPFNT------SPTSP 1579
Query: 329 QFSPSTGYSPSQPGYSPSSTSQYT 258
+SPS+GYSP+ PG S +S T
Sbjct: 1580 GYSPSSGYSPTSPGMSITSPRYMT 1603
[167][TOP]
>UniRef100_Q54LJ4 Type A von Willebrand factor domain-containing protein n=1
Tax=Dictyostelium discoideum RepID=Q54LJ4_DICDI
Length = 2563
Score = 96.3 bits (238), Expect = 9e-19
Identities = 46/70 (65%), Positives = 51/70 (72%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYS 303
S PYSPTSP Y PTSPSYSPTSPSYSP+SP+YSP+SP S SP YS S S S YS
Sbjct: 1843 SQPYSPTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLYASTSQSYS 1902
Query: 302 PSQPGYSPSS 273
P P Y+P+S
Sbjct: 1903 PVSPSYTPTS 1912
Score = 92.8 bits (229), Expect = 1e-17
Identities = 51/85 (60%), Positives = 60/85 (70%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS------GVSPDYSPSSPQ 327
P+SP Y PTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S S YSP SP
Sbjct: 1848 PTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLYASTSQSYSPVSPS 1907
Query: 326 FSP-STGYSPSQPGYSPSSTSQYTP 255
++P S Y+P+ P YSP S S Y P
Sbjct: 1908 YTPTSLLYAPTIPSYSPVSPS-YAP 1931
Score = 87.0 bits (214), Expect = 6e-16
Identities = 44/77 (57%), Positives = 52/77 (67%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P S + S YSPTSP Y PTSPSYSP+SP+YSP+SP S SP YSP+SP +S S Y
Sbjct: 1835 PPSLFFQASQPYSPTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLY 1894
Query: 305 SPSQPGYSPSSTSQYTP 255
+ + YSP S S YTP
Sbjct: 1895 ASTSQSYSPVSPS-YTP 1910
Score = 80.1 bits (196), Expect = 7e-14
Identities = 44/89 (49%), Positives = 54/89 (60%), Gaps = 15/89 (16%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYS-------------PTSPSYSPSSPTYSPSSPYNSGVSPD 348
P+SP YSPTSP+YSPTSPSYS P SPSY+P+S Y+P+ P S VSP
Sbjct: 1869 PTSPSYSPTSPSYSPTSPSYSTSPLYASTSQSYSPVSPSYTPTSLLYAPTIPSYSPVSPS 1928
Query: 347 YSPSSPQFSP-STGYSPSQPGYSPSSTSQ 264
Y+P+ P P T YSPS P +S S +
Sbjct: 1929 YAPTKPSKLPVLTSYSPSSPSFSKSKAKE 1957
Score = 73.9 bits (180), Expect = 5e-12
Identities = 41/87 (47%), Positives = 50/87 (57%), Gaps = 12/87 (13%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYS 303
S YSP SP+Y+PTS Y+PT PSYSP SP+Y+P+ P V YSPSSP FS S
Sbjct: 1898 SQSYSPVSPSYTPTSLLYAPTIPSYSPVSPSYAPTKPSKLPVLTSYSPSSPSFSKSKAKE 1957
Query: 302 ---------PSQP---GYSPSSTSQYT 258
PS+P GYS ST ++
Sbjct: 1958 ESTLSEINLPSKPMVAGYSRMSTVSFS 1984
[168][TOP]
>UniRef100_B6QAY2 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC 18224
RepID=B6QAY2_PENMQ
Length = 1744
Score = 95.9 bits (237), Expect = 1e-18
Identities = 49/92 (53%), Positives = 58/92 (63%), Gaps = 16/92 (17%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP----- 318
S YSPTSP++ TSPSYSPTSP +SPSSP YSPSSP S SP +SPSSP +SP
Sbjct: 1618 SPAYSPTSPSFQATSPSYSPTSPRFSPSSPNYSPSSPNFSPASPAFSPSSPTYSPTSPAI 1677
Query: 317 -----------STGYSPSQPGYSPSSTSQYTP 255
S YSP+ PG+SP+S Y+P
Sbjct: 1678 GGRQFSPSSPSSPKYSPASPGWSPTSPEIYSP 1709
Score = 89.4 bits (220), Expect = 1e-16
Identities = 45/83 (54%), Positives = 60/83 (72%), Gaps = 5/83 (6%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S +SP SP ++ TSP+YSPTSPS+ +SP+YSP+SP S SP+YSPSSP FSP S +
Sbjct: 1604 SPGFSPQSPAFAITSPAYSPTSPSFQATSPSYSPTSPRFSPSSPNYSPSSPNFSPASPAF 1663
Query: 305 SPSQPGYSPSSTS----QYTPQT 249
SPS P YSP+S + Q++P +
Sbjct: 1664 SPSSPTYSPTSPAIGGRQFSPSS 1686
Score = 87.8 bits (216), Expect = 3e-16
Identities = 44/79 (55%), Positives = 54/79 (68%), Gaps = 8/79 (10%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSP-------SSPTYSPSSPYNSGVSPDYSPSSPQ 327
PSS YSP+SPN S TSP + TSP +SP +SP YSP+SP SP YSP+SP+
Sbjct: 1582 PSSSYSPSSPNMSVTSPRFMSTSPGFSPQSPAFAITSPAYSPTSPSFQATSPSYSPTSPR 1641
Query: 326 FSPST-GYSPSQPGYSPSS 273
FSPS+ YSPS P +SP+S
Sbjct: 1642 FSPSSPNYSPSSPNFSPAS 1660
Score = 84.0 bits (206), Expect = 5e-15
Identities = 50/109 (45%), Positives = 66/109 (60%), Gaps = 27/109 (24%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG--------VSPDYSPSS 333
P+SP +SP+SPNYSP+SP++SP SP++SPSSPTYSP+SP G SP YSP+S
Sbjct: 1637 PTSPRFSPSSPNYSPSSPNFSPASPAFSPSSPTYSPTSPAIGGRQFSPSSPSSPKYSPAS 1696
Query: 332 PQFSPSTG--YSPSQPG----------------YSPSSTSQYTPQTNDQ 240
P +SP++ YSP+ P YSP+S QY P + Q
Sbjct: 1697 PGWSPTSPEIYSPTSPNIHGSPTSPARGATSPSYSPTS-PQYNPTSPRQ 1744
Score = 73.6 bits (179), Expect = 7e-12
Identities = 48/97 (49%), Positives = 58/97 (59%), Gaps = 18/97 (18%)
Frame = -3
Query: 485 PSSP--YSPTSP-NYSPTSPSYSPTSPSYSPSSPT--------------YSPSSPYNSGV 357
P SP YSPTSP N SP SP YSP+S SYSPSSP +SP SP +
Sbjct: 1559 PQSPGGYSPTSPFNTSPVSPGYSPSS-SYSPSSPNMSVTSPRFMSTSPGFSPQSPAFAIT 1617
Query: 356 SPDYSPSSPQF-SPSTGYSPSQPGYSPSSTSQYTPQT 249
SP YSP+SP F + S YSP+ P +SPSS + Y+P +
Sbjct: 1618 SPAYSPTSPSFQATSPSYSPTSPRFSPSSPN-YSPSS 1653
[169][TOP]
>UniRef100_Q5KGG3 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q5KGG3_CRYNE
Length = 1786
Score = 95.5 bits (236), Expect = 2e-18
Identities = 52/92 (56%), Positives = 62/92 (67%), Gaps = 16/92 (17%)
Frame = -3
Query: 482 SSPYSPTS--------------PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN-SGVSPD 348
+SPYSPTS P YSPTSP YSPTSP++SP+SP+YSP+SP SP
Sbjct: 1642 ASPYSPTSPAYSPTSPMGGITSPQYSPTSPRYSPTSPAFSPTSPSYSPTSPAPFQATSPR 1701
Query: 347 YSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
YSP+SPQFSP S YSP+ P YSP+S QY+P
Sbjct: 1702 YSPTSPQFSPTSPTYSPASPAYSPTS-PQYSP 1732
Score = 92.0 bits (227), Expect = 2e-17
Identities = 48/101 (47%), Positives = 59/101 (58%), Gaps = 27/101 (26%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG------------------- 360
S YSPTSP YSPTSP +SPTSPS+SPSSPTYSP+SP G
Sbjct: 1595 SPAYSPTSPQYSPTSPQFSPTSPSFSPSSPTYSPASPAYGGAGAGNRASPYSPTSPAYSP 1654
Query: 359 -------VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 261
SP YSP+SP++SP S +SP+ P YSP+S + +
Sbjct: 1655 TSPMGGITSPQYSPTSPRYSPTSPAFSPTSPSYSPTSPAPF 1695
Score = 86.3 bits (212), Expect = 1e-15
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSP 300
+P+ TSP YSPTSP +SPTSP+YSP+SP YSP+SP S SP YSP+SP +SP+ SP
Sbjct: 1693 APFQATSPRYSPTSPQFSPTSPTYSPASPAYSPTSPQYSPTSPAYSPTSPAYSPT---SP 1749
Query: 299 SQPGYSPSSTSQYTPQTNDQDERG 228
+ G +P+ + Q N Q G
Sbjct: 1750 AYGGAAPNGGT--AQQQNGQARPG 1771
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/112 (41%), Positives = 61/112 (54%), Gaps = 35/112 (31%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSP----------------SYSPTSPSYSPSSPTYSPSSPYNSGVS 354
P+SP++ TSP YSPTSP Y TSP+YSP+SP YSP+SP S S
Sbjct: 1557 PTSPFAVTSPAYSPTSPFAGAAAGAASPWVGRGGYGATSPAYSPTSPQYSPTSPQFSPTS 1616
Query: 353 PDYSPSSPQFSP-------------STGYSPSQPGYSPSS------TSQYTP 255
P +SPSSP +SP ++ YSP+ P YSP+S + QY+P
Sbjct: 1617 PSFSPSSPTYSPASPAYGGAGAGNRASPYSPTSPAYSPTSPMGGITSPQYSP 1668
Score = 82.0 bits (201), Expect = 2e-14
Identities = 44/87 (50%), Positives = 52/87 (59%), Gaps = 20/87 (22%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP------------DYSPSSP 330
Y TSP YSPTSP YSPTSP +SP+SP++SPSSP S SP YSP+SP
Sbjct: 1591 YGATSPAYSPTSPQYSPTSPQFSPTSPSFSPSSPTYSPASPAYGGAGAGNRASPYSPTSP 1650
Query: 329 QFSP--------STGYSPSQPGYSPSS 273
+SP S YSP+ P YSP+S
Sbjct: 1651 AYSPTSPMGGITSPQYSPTSPRYSPTS 1677
Score = 81.6 bits (200), Expect = 2e-14
Identities = 39/68 (57%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF---SPST 312
S YSPTSP +SPTSP+YSP SP+YSP+SP YSP+SP S SP YSP+SP + +P+
Sbjct: 1699 SPRYSPTSPQFSPTSPTYSPASPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYGGAAPNG 1758
Query: 311 GYSPSQPG 288
G + Q G
Sbjct: 1759 GTAQQQNG 1766
Score = 72.4 bits (176), Expect = 1e-11
Identities = 43/85 (50%), Positives = 52/85 (61%), Gaps = 18/85 (21%)
Frame = -3
Query: 473 YSPTSP-NYSPTSPSYSPTSPSYSPSSP----------------TYSPSSPYNSGVSPDY 345
YSP+SP YSPTSP ++ TSP+YSP+SP Y +SP S SP Y
Sbjct: 1547 YSPSSPAGYSPTSP-FAVTSPAYSPTSPFAGAAAGAASPWVGRGGYGATSPAYSPTSPQY 1605
Query: 344 SPSSPQFSP-STGYSPSQPGYSPSS 273
SP+SPQFSP S +SPS P YSP+S
Sbjct: 1606 SPTSPQFSPTSPSFSPSSPTYSPAS 1630
Score = 68.6 bits (166), Expect = 2e-10
Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP Y ++P + P + + G
Sbjct: 1718 PASPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYGGAAPNGGTAQQQNGQARPGWGNTGG 1777
Query: 308 YSPS 297
Y S
Sbjct: 1778 YGTS 1781
[170][TOP]
>UniRef100_C4JY44 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704
RepID=C4JY44_UNCRE
Length = 1747
Score = 95.5 bits (236), Expect = 2e-18
Identities = 48/94 (51%), Positives = 61/94 (64%), Gaps = 17/94 (18%)
Frame = -3
Query: 485 PSSP-----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 321
P+SP SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP+SP
Sbjct: 1575 PTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALG 1634
Query: 320 PSTG------------YSPSQPGYSPSSTSQYTP 255
TG Y+P+ PG+SP+S Y+P
Sbjct: 1635 GVTGRHLSPTSPTSPKYTPTSPGWSPTSPDAYSP 1668
Score = 85.1 bits (209), Expect = 2e-15
Identities = 47/96 (48%), Positives = 58/96 (60%), Gaps = 25/96 (26%)
Frame = -3
Query: 485 PSSPYSPTSPN-------------YSPTSPSYSPTSPSY-----------SPSSPTYSPS 378
PSS YSPTSP +SP SPS++PTSP+Y SP+SP+YSP+
Sbjct: 1535 PSSGYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPGYGQAQSPTSPSYSPT 1594
Query: 377 SPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 273
SP S SP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1595 SPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1630
Score = 84.7 bits (208), Expect = 3e-15
Identities = 49/107 (45%), Positives = 66/107 (61%), Gaps = 30/107 (28%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGV-----------SPDYS 342
P+SP +SPTSP+YSPTSPS+SP SP++SP+SP+YSP+SP GV SP Y+
Sbjct: 1593 PTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGVTGRHLSPTSPTSPKYT 1652
Query: 341 PSSPQFSPST--GYSPSQ----------------PGYSPSSTSQYTP 255
P+SP +SP++ YSP+ PGYSP+S + Y P
Sbjct: 1653 PTSPGWSPTSPDAYSPTSPNFAGSPTSPGWSLLPPGYSPTSPT-YNP 1698
Score = 72.0 bits (175), Expect = 2e-11
Identities = 45/83 (54%), Positives = 54/83 (65%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P YSPTSP N SPTSP YSP+S YSP+SP +SP SP +SP+SP F+P S
Sbjct: 1514 PGGGYSPTSPFNTSPTSPGYSPSS-GYSPTSPGMGITSP-RFMTSPGFSPASPSFAPTSP 1571
Query: 311 GYSPSQPGY----SPSSTSQYTP 255
YSP+ PGY SP+S S Y+P
Sbjct: 1572 AYSPTSPGYGQAQSPTSPS-YSP 1593
Score = 69.3 bits (168), Expect = 1e-10
Identities = 34/58 (58%), Positives = 45/58 (77%), Gaps = 3/58 (5%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTY--SPSSPYNSGVSPDYSPSSPQFSPS 315
SP SPTSP Y+PTSP +SPTSP +YSP+SP + SP+SP S + P YSP+SP ++P+
Sbjct: 1642 SPTSPTSPKYTPTSPGWSPTSPDAYSPTSPNFAGSPTSPGWSLLPPGYSPTSPTYNPN 1699
[171][TOP]
>UniRef100_Q7SDN0 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
RepID=Q7SDN0_NEUCR
Length = 1752
Score = 95.1 bits (235), Expect = 2e-18
Identities = 50/90 (55%), Positives = 65/90 (72%), Gaps = 4/90 (4%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPD-YSPSSPQF--SPS 315
P+ +SPTSP+YSPTSPSYSP SP++ +SP+YSP+SP S SPD YSP+SP F SP
Sbjct: 1659 PAQQFSPTSPSYSPTSPSYSPASPAFQATSPSYSPASPTWSPTSPDAYSPTSPSFQRSPG 1718
Query: 314 TGYSPSQP-GYSPSSTSQYTPQTNDQDERG 228
SP+ P GYSP+S QY+P+T ++ G
Sbjct: 1719 QQLSPTSPTGYSPTS-PQYSPRTPGRNNSG 1747
Score = 89.0 bits (219), Expect = 2e-16
Identities = 46/80 (57%), Positives = 57/80 (71%), Gaps = 6/80 (7%)
Frame = -3
Query: 476 PYSPTSPNYSPTSPSYSPTSPS---YSPSSPT--YSPSSPYNSGVSPDYSPSSPQF-SPS 315
P SPTSP+YSPTSPSYSP SP+ YSP+SP +SP+SP S SP YSP+SP F + S
Sbjct: 1629 PGSPTSPSYSPTSPSYSPASPAAARYSPTSPAQQFSPTSPSYSPTSPSYSPASPAFQATS 1688
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ P +SP+S Y+P
Sbjct: 1689 PSYSPASPTWSPTSPDAYSP 1708
Score = 71.6 bits (174), Expect = 2e-11
Identities = 45/110 (40%), Positives = 63/110 (57%), Gaps = 34/110 (30%)
Frame = -3
Query: 482 SSPYSPTSP----NYSPTSPS--YSPTSP------------SYSPSSPTYSPSSPY---N 366
+SP++PTSP YSP+SP+ YSP+SP +SPSSP++SP+SP
Sbjct: 1571 TSPFTPTSPFSYGGYSPSSPAAGYSPSSPLLDSAGRFASSPQFSPSSPSFSPTSPMLRPG 1630
Query: 365 SGVSPDYSPSSPQFSPST-------------GYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP +SP++ +SP+ P YSP+S S Y+P
Sbjct: 1631 SPTSPSYSPTSPSYSPASPAAARYSPTSPAQQFSPTSPSYSPTSPS-YSP 1679
Score = 60.8 bits (146), Expect = 4e-08
Identities = 45/101 (44%), Positives = 54/101 (53%), Gaps = 24/101 (23%)
Frame = -3
Query: 470 SPTSPNYSPTSPSYSPTSP----SYSPSSPT--YSPSSPYNSGV-----SPDYSPSSPQF 324
S TSP TSP ++PTSP YSPSSP YSPSSP SP +SPSSP F
Sbjct: 1564 SATSPR--ATSP-FTPTSPFSYGGYSPSSPAAGYSPSSPLLDSAGRFASSPQFSPSSPSF 1620
Query: 323 SP-----------STGYSPSQPGYSPSS--TSQYTPQTNDQ 240
SP S YSP+ P YSP+S ++Y+P + Q
Sbjct: 1621 SPTSPMLRPGSPTSPSYSPTSPSYSPASPAAARYSPTSPAQ 1661
[172][TOP]
>UniRef100_C6F1F1 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F1_PLAVI
Length = 211
Score = 94.7 bits (234), Expect = 3e-18
Identities = 46/70 (65%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY- 306
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SPS+
Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVP 112
Query: 305 -SPSQPGYSP 279
+PS P YSP
Sbjct: 113 NNPSSPHYSP 122
Score = 86.3 bits (212), Expect = 1e-15
Identities = 43/74 (58%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 297
+S SP YS TSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S YSPS
Sbjct: 49 HSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPS 108
Query: 296 QPGYSPSSTSQYTP 255
P + S+ Y+P
Sbjct: 109 SPVPNNPSSPHYSP 122
Score = 77.0 bits (188), Expect = 6e-13
Identities = 45/99 (45%), Positives = 54/99 (54%), Gaps = 21/99 (21%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPS--------------------YSPTSPSYSPSSPTYSPSSPYNS 363
SS + T YSPTSP+ YS TSP YSP+SP YSP+SP S
Sbjct: 19 SSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYS 78
Query: 362 GVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 249
SP YSP+SP++SP S YSP+ P YSPSS P +
Sbjct: 79 PTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSS 117
Score = 75.9 bits (185), Expect = 1e-12
Identities = 47/90 (52%), Positives = 52/90 (57%), Gaps = 20/90 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY-NSGVSPDYSP--------- 339
P+SP YSPTSP YSPTSP YSPTSP YSP+SP YSPSSP N+ SP YSP
Sbjct: 72 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSPYAIASPKFS 131
Query: 338 --------SSPQFSPS-TGYSPSQPGYSPS 276
SSP + S S SQ SP+
Sbjct: 132 PTSPAYSISSPVYDQSGNARSKSQHPLSPA 161
[173][TOP]
>UniRef100_A5K7P4 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax
RepID=A5K7P4_PLAVI
Length = 2379
Score = 94.7 bits (234), Expect = 3e-18
Identities = 46/70 (65%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY- 306
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SPS+
Sbjct: 2221 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVP 2280
Query: 305 -SPSQPGYSP 279
+PS P YSP
Sbjct: 2281 NNPSSPHYSP 2290
Score = 86.3 bits (212), Expect = 1e-15
Identities = 43/74 (58%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 297
+S SP YS TSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S YSPS
Sbjct: 2217 HSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPS 2276
Query: 296 QPGYSPSSTSQYTP 255
P + S+ Y+P
Sbjct: 2277 SPVPNNPSSPHYSP 2290
Score = 76.3 bits (186), Expect = 1e-12
Identities = 49/120 (40%), Positives = 57/120 (47%), Gaps = 42/120 (35%)
Frame = -3
Query: 482 SSPYSPTSPN---------------------YSPTSPS--------------------YS 426
S YSPTSP YSPTSP+ YS
Sbjct: 2166 SPSYSPTSPTYHLTNPASGGGSSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYS 2225
Query: 425 PTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 249
TSP YSP+SP YSP+SP S SP YSP+SP++SP S YSP+ P YSPSS P +
Sbjct: 2226 VTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSS 2285
Score = 75.9 bits (185), Expect = 1e-12
Identities = 47/90 (52%), Positives = 52/90 (57%), Gaps = 20/90 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY-NSGVSPDYSP--------- 339
P+SP YSPTSP YSPTSP YSPTSP YSP+SP YSPSSP N+ SP YSP
Sbjct: 2240 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSPYAIASPKFS 2299
Query: 338 --------SSPQFSPS-TGYSPSQPGYSPS 276
SSP + S S SQ SP+
Sbjct: 2300 PTSPAYSISSPVYDQSGNARSKSQHPLSPA 2329
Score = 59.7 bits (143), Expect = 1e-07
Identities = 46/126 (36%), Positives = 56/126 (44%), Gaps = 49/126 (38%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPS---------------------YSPSSPT--------- 390
SP T N SPSYSPTSP+ YSP+SPT
Sbjct: 2155 SPKQQTQNNIY--SPSYSPTSPTYHLTNPASGGGSSGLNGTKAYYSPTSPTNQLDEVNPN 2212
Query: 389 ------------------YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 267
YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 2213 MMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-P 2271
Query: 266 QYTPQT 249
QY+P +
Sbjct: 2272 QYSPSS 2277
[174][TOP]
>UniRef100_A2QAT7 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2QAT7_ASPNC
Length = 1747
Score = 94.7 bits (234), Expect = 3e-18
Identities = 45/78 (57%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP +SPTSPNYSPTSPS+SP SP++SP+SP+YSP+SP GV SP+SP S
Sbjct: 1639 PTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAVGGVGRHLSPTSP---TSPK 1695
Query: 308 YSPSQPGYSPSSTSQYTP 255
Y+P+ PG+SP+S Y+P
Sbjct: 1696 YTPTSPGWSPTSPQTYSP 1713
Score = 87.4 bits (215), Expect = 4e-16
Identities = 47/96 (48%), Positives = 61/96 (63%), Gaps = 25/96 (26%)
Frame = -3
Query: 485 PSSPYSPT---------------------SPNYSPTSPSYSPTSPSY---SPSSPTYSPS 378
P+S YSPT SP+++PTSP+YSPTSP+Y SP+SP+YSP+
Sbjct: 1581 PTSSYSPTSPGMAITSPRFMSTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPT 1640
Query: 377 SPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 273
SP S SP+YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1641 SPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1676
Score = 78.6 bits (192), Expect = 2e-13
Identities = 44/88 (50%), Positives = 58/88 (65%), Gaps = 14/88 (15%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGVSPDY- 345
P+SP +SPTSP+YSPTSP+ SPTSP Y+P+SP +SP+SP S SP++
Sbjct: 1660 PASPAFSPTSPSYSPTSPAVGGVGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFA 1719
Query: 344 -SPSSPQFSPSTGYSPSQPGYSPSSTSQ 264
SP+SP S GYSP+ P +SP+S Q
Sbjct: 1720 GSPTSPGGPTSPGYSPTSPAFSPTSPRQ 1747
Score = 77.4 bits (189), Expect = 5e-13
Identities = 48/90 (53%), Positives = 60/90 (66%), Gaps = 13/90 (14%)
Frame = -3
Query: 485 PSSPYS--PTSPNYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYNSGVSPDYSPSS 333
PSSP+S PTSP YSPTS SYSPTSP + +SP +SP+SP + SP YSP+S
Sbjct: 1566 PSSPFSANPTSPGYSPTS-SYSPTSPGMAITSPRFMSTSPGFSPASPSFAPTSPAYSPTS 1624
Query: 332 P---QFSP-STGYSPSQPGYSPSSTSQYTP 255
P Q SP S YSP+ PG+SP+S + Y+P
Sbjct: 1625 PAYGQASPTSPSYSPTSPGFSPTSPN-YSP 1653
Score = 71.2 bits (173), Expect = 3e-11
Identities = 42/78 (53%), Positives = 54/78 (69%), Gaps = 5/78 (6%)
Frame = -3
Query: 473 YSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSP 300
YSP+SP + +PTSP YSPTS SYSP+SP + +SP SP +SP+SP F+P S YSP
Sbjct: 1564 YSPSSPFSANPTSPGYSPTS-SYSPTSPGMAITSPRFMSTSPGFSPASPSFAPTSPAYSP 1622
Query: 299 SQPGY---SPSSTSQYTP 255
+ P Y SP+S S Y+P
Sbjct: 1623 TSPAYGQASPTSPS-YSP 1639
Score = 64.7 bits (156), Expect = 3e-09
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
SP + + YSP+SP S +PTSP YSP+S +YSP+SP + SP + +SP FSP S +
Sbjct: 1555 SPAATSPAGYSPSSPFSANPTSPGYSPTS-SYSPTSPGMAITSPRFMSTSPGFSPASPSF 1613
Query: 305 SPSQPGYSPSS 273
+P+ P YSP+S
Sbjct: 1614 APTSPAYSPTS 1624
[175][TOP]
>UniRef100_C5FCL2 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
RepID=C5FCL2_NANOT
Length = 1748
Score = 94.4 bits (233), Expect = 4e-18
Identities = 49/93 (52%), Positives = 62/93 (66%), Gaps = 16/93 (17%)
Frame = -3
Query: 485 PSSP-----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP--- 330
P+SP SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP+SP
Sbjct: 1622 PTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPVFSPTSPSYSPTSPALG 1681
Query: 329 ----QFSP----STGYSPSQPGYSPSSTSQYTP 255
SP S Y+P+ PG+SP+S Y+P
Sbjct: 1682 GTGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSP 1714
Score = 90.9 bits (224), Expect = 4e-17
Identities = 46/76 (60%), Positives = 58/76 (76%), Gaps = 6/76 (7%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSYSPTSPSY----SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 318
SSP +SP SP+++PTSP+YSPTSP Y SP+SP+YSP+SP S SP YSP+SP FSP
Sbjct: 1602 SSPAFSPASPSFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSP 1661
Query: 317 -STGYSPSQPGYSPSS 273
S +SP+ P YSP+S
Sbjct: 1662 ASPVFSPTSPSYSPTS 1677
Score = 84.0 bits (206), Expect = 5e-15
Identities = 45/82 (54%), Positives = 55/82 (67%), Gaps = 11/82 (13%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSP------SYSPTSPSYSPSSPTYSPSSP----YNSGVSPDYSPS 336
PSS YSPTSP S TSP ++SP SPS++P+SP YSP+SP S SP YSP+
Sbjct: 1582 PSSGYSPTSPGMSITSPRFISSPAFSPASPSFAPTSPAYSPTSPGYGQAQSPTSPSYSPT 1641
Query: 335 SPQFSP-STGYSPSQPGYSPSS 273
SP FSP S YSP+ P +SP+S
Sbjct: 1642 SPGFSPTSPSYSPTSPSFSPAS 1663
Score = 77.0 bits (188), Expect = 6e-13
Identities = 44/98 (44%), Positives = 59/98 (60%), Gaps = 25/98 (25%)
Frame = -3
Query: 485 PSSPYSPTSP-NYSPTSPSYSP-------------------TSPSYSPSSPTYSPSSPYN 366
P YSP+SP N SPTSP+YSP +SP++SP+SP+++P+SP
Sbjct: 1561 PGGGYSPSSPFNTSPTSPAYSPSSGYSPTSPGMSITSPRFISSPAFSPASPSFAPTSPAY 1620
Query: 365 SGVSPDY----SPSSPQFSP-STGYSPSQPGYSPSSTS 267
S SP Y SP+SP +SP S G+SP+ P YSP+S S
Sbjct: 1621 SPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPS 1658
Score = 75.5 bits (184), Expect = 2e-12
Identities = 43/88 (48%), Positives = 58/88 (65%), Gaps = 14/88 (15%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSY----------SPTSPSYSPSSPTYSPSSP-YNSGVSPDY- 345
P+SP +SPTSP+YSPTSP+ SPTSP Y+P+SP +SP+SP S SP++
Sbjct: 1661 PASPVFSPTSPSYSPTSPALGGTGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPNFS 1720
Query: 344 -SPSSPQFSPSTGYSPSQPGYSPSSTSQ 264
SP+SP S GYSP+ P ++P+S Q
Sbjct: 1721 GSPTSPGGPTSPGYSPTSPTFNPTSPRQ 1748
Score = 66.6 bits (161), Expect = 8e-10
Identities = 41/73 (56%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
Frame = -3
Query: 479 SPYSPTSPN--YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
SP+ P SP YSP+SP + SPTSP+YSPSS YSP+SP S SP + SSP FSP S
Sbjct: 1554 SPHEPRSPGGGYSPSSPFNTSPTSPAYSPSSG-YSPTSPGMSITSPRFI-SSPAFSPASP 1611
Query: 311 GYSPSQPGYSPSS 273
++P+ P YSP+S
Sbjct: 1612 SFAPTSPAYSPTS 1624
Score = 54.7 bits (130), Expect = 3e-06
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 12/83 (14%)
Frame = -3
Query: 485 PSSPYSPTSP----------NYSPTSPSYSPTSPSYSPSSPT--YSPSSPYNSGVSPDYS 342
P S +SP +Y P PSY SP + P SP YSPSSP+N+ S
Sbjct: 1524 PDSQFSPVRQAGSENAVGFADYQP--PSYGGFSP-HEPRSPGGGYSPSSPFNT------S 1574
Query: 341 PSSPQFSPSTGYSPSQPGYSPSS 273
P+SP +SPS+GYSP+ PG S +S
Sbjct: 1575 PTSPAYSPSSGYSPTSPGMSITS 1597
[176][TOP]
>UniRef100_B6H9U6 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6H9U6_PENCW
Length = 1733
Score = 94.4 bits (233), Expect = 4e-18
Identities = 50/98 (51%), Positives = 62/98 (63%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSP-YSPTSPNY---SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 318
P+SP YSPTSP Y SPTSPSYSPTSP +SP+SP YSP+SP S SP +SP+SP +SP
Sbjct: 1605 PTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSP 1664
Query: 317 -----------------STGYSPSQPGYSPSSTSQYTP 255
S Y+P+ PG+SP+S Y+P
Sbjct: 1665 TSPAIGGARHLSPTSPTSPKYTPTSPGWSPTSPQSYSP 1702
Score = 91.7 bits (226), Expect = 2e-17
Identities = 44/74 (59%), Positives = 56/74 (75%), Gaps = 4/74 (5%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
S +SP SP + PTSP+YSPTSP+Y SP+SP+YSP+SP S SP+YSP+SP FSP S
Sbjct: 1593 SPGFSPASPTFQPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPAS 1652
Query: 314 TGYSPSQPGYSPSS 273
+SP+ P YSP+S
Sbjct: 1653 PAFSPTSPSYSPTS 1666
Score = 87.0 bits (214), Expect = 6e-16
Identities = 46/89 (51%), Positives = 60/89 (67%), Gaps = 12/89 (13%)
Frame = -3
Query: 485 PSSPYSPTSPN--------YSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSGVSPDYSP 339
PSS YSPTSP +SP SP++ PTSP+YSP+SP Y SP+SP S SP +SP
Sbjct: 1577 PSSSYSPTSPGIGMMTSPGFSPASPTFQPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSP 1636
Query: 338 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP +SP S +SP+ P +SP+S S Y+P
Sbjct: 1637 TSPNYSPTSPSFSPASPAFSPTSPS-YSP 1664
Score = 82.0 bits (201), Expect = 2e-14
Identities = 47/87 (54%), Positives = 59/87 (67%), Gaps = 14/87 (16%)
Frame = -3
Query: 485 PSSPY--SPTSPNYSPTSPSYSPTSPS--------YSPSSPTYSPSSPYNSGVSPDY--- 345
P+SP+ SPTSP YSP+S SYSPTSP +SP+SPT+ P+SP S SP Y
Sbjct: 1562 PTSPFNTSPTSPGYSPSS-SYSPTSPGIGMMTSPGFSPASPTFQPTSPAYSPTSPAYGQA 1620
Query: 344 SPSSPQFSP-STGYSPSQPGYSPSSTS 267
SP+SP +SP S G+SP+ P YSP+S S
Sbjct: 1621 SPTSPSYSPTSPGFSPTSPNYSPTSPS 1647
Score = 77.4 bits (189), Expect = 5e-13
Identities = 44/90 (48%), Positives = 56/90 (62%), Gaps = 16/90 (17%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSY---------SPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
P+SP +SPTSP+YSPTSP+ SPTSP Y+P+SP +SP+SP + YSP+
Sbjct: 1650 PASPAFSPTSPSYSPTSPAIGGARHLSPTSPTSPKYTPTSPGWSPTSPQS------YSPT 1703
Query: 335 SPQFS------PSTGYSPSQPGYSPSSTSQ 264
SP FS S YSP+ P YSP+S Q
Sbjct: 1704 SPNFSGSPTSPTSPAYSPTSPAYSPTSPRQ 1733
Score = 61.6 bits (148), Expect = 3e-08
Identities = 42/84 (50%), Positives = 54/84 (64%), Gaps = 9/84 (10%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGV----SPDYSPSSPQFSP- 318
SP + + YSPTSP + SPTSP YSPSS +YSP+ + G+ SP +SP+SP F P
Sbjct: 1551 SPAARSPGGYSPTSPFNTSPTSPGYSPSS-SYSPT---SPGIGMMTSPGFSPASPTFQPT 1606
Query: 317 STGYSPSQPGY---SPSSTSQYTP 255
S YSP+ P Y SP+S S Y+P
Sbjct: 1607 SPAYSPTSPAYGQASPTSPS-YSP 1629
[177][TOP]
>UniRef100_Q0D054 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
RepID=Q0D054_ASPTN
Length = 1742
Score = 94.0 bits (232), Expect = 5e-18
Identities = 50/98 (51%), Positives = 62/98 (63%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSP-YSPTSPNY---SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 318
P+SP YSPTSP Y SPTSPSYSPTSP +SP+SP YSP+SP S SP +SP+SP +SP
Sbjct: 1615 PTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPNLSPASPVFSPTSPSYSP 1674
Query: 317 -----------------STGYSPSQPGYSPSSTSQYTP 255
S Y+P+ PG+SP+S Y+P
Sbjct: 1675 TSPALGAGRNMSPTSPTSPKYTPTSPGWSPTSPQSYSP 1712
Score = 87.4 bits (215), Expect = 4e-16
Identities = 43/74 (58%), Positives = 55/74 (74%), Gaps = 4/74 (5%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 315
S +SP SP + PTSP+YSPTSP+Y SP+SP+YSP+SP S SP+YSP+SP SP S
Sbjct: 1603 SPGFSPASPAFGPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPNLSPAS 1662
Query: 314 TGYSPSQPGYSPSS 273
+SP+ P YSP+S
Sbjct: 1663 PVFSPTSPSYSPTS 1676
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/93 (49%), Positives = 59/93 (63%), Gaps = 16/93 (17%)
Frame = -3
Query: 485 PSSPYSPTSPN------------YSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSGVSP 351
PSS YSPTSP +SP SP++ PTSP+YSP+SP Y SP+SP S SP
Sbjct: 1583 PSSSYSPTSPGMGITSPRMTSPGFSPASPAFGPTSPAYSPTSPAYGQASPTSPSYSPTSP 1642
Query: 350 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP+SP +SP S SP+ P +SP+S S Y+P
Sbjct: 1643 GFSPTSPNYSPTSPNLSPASPVFSPTSPS-YSP 1674
Score = 82.8 bits (203), Expect = 1e-14
Identities = 50/98 (51%), Positives = 63/98 (64%), Gaps = 16/98 (16%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTY---------SPSSPYNSGVSPDYSPS 336
P+SP YSPTSPN SP SP +SPTSPSYSP+SP SP+SP + SP +SP+
Sbjct: 1646 PTSPNYSPTSPNLSPASPVFSPTSPSYSPTSPALGAGRNMSPTSPTSPKYTPTSPGWSPT 1705
Query: 335 SPQF----SPSTGYSPSQPG--YSPSSTSQYTPQTNDQ 240
SPQ SP+ G SP+ PG YSP+S + Y+P + Q
Sbjct: 1706 SPQSYSPTSPNIGGSPTSPGGAYSPTSPT-YSPTSPRQ 1742
Score = 71.2 bits (173), Expect = 3e-11
Identities = 47/88 (53%), Positives = 59/88 (67%), Gaps = 11/88 (12%)
Frame = -3
Query: 485 PSSPYS--PTSPNYSPTSPSYSPTSPSY---SP--SSPTYSPSSPYNSGVSPDYSPSSP- 330
P SP+S TSP+YSP+S SYSPTSP SP +SP +SP+SP SP YSP+SP
Sbjct: 1568 PGSPFSGGATSPSYSPSS-SYSPTSPGMGITSPRMTSPGFSPASPAFGPTSPAYSPTSPA 1626
Query: 329 --QFSP-STGYSPSQPGYSPSSTSQYTP 255
Q SP S YSP+ PG+SP+S + Y+P
Sbjct: 1627 YGQASPTSPSYSPTSPGFSPTSPN-YSP 1653
[178][TOP]
>UniRef100_C8VQG7 DNA-directed RNA polymerase (EC 2.7.7.6)
[Source:UniProtKB/TrEMBL;Acc:Q873Q6] n=2 Tax=Emericella
nidulans RepID=C8VQG7_EMENI
Length = 1745
Score = 94.0 bits (232), Expect = 5e-18
Identities = 50/98 (51%), Positives = 62/98 (63%), Gaps = 21/98 (21%)
Frame = -3
Query: 485 PSSP-YSPTSPNY---SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 318
P+SP YSPTSP Y SPTSPSYSPTSP +SP+SP YSP+SP S SP +SP+SP +SP
Sbjct: 1614 PTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPSYSP 1673
Query: 317 -----------------STGYSPSQPGYSPSSTSQYTP 255
S Y+P+ PG+SP+S Y+P
Sbjct: 1674 TSPAIGGARHLSPTSPTSPKYTPTSPGWSPTSPQTYSP 1711
Score = 89.0 bits (219), Expect = 2e-16
Identities = 49/108 (45%), Positives = 63/108 (58%), Gaps = 34/108 (31%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGV---------SPDYSPS 336
P+SP +SPTSPNYSPTSPS+SPTSP++SP+SP+YSP+SP G SP Y+P+
Sbjct: 1638 PTSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPSYSPTSPAIGGARHLSPTSPTSPKYTPT 1697
Query: 335 SPQFSP------------------------STGYSPSQPGYSPSSTSQ 264
SP +SP S GYSP+ P +SP+S Q
Sbjct: 1698 SPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSPAFSPTSPRQ 1745
Score = 85.9 bits (211), Expect = 1e-15
Identities = 43/80 (53%), Positives = 58/80 (72%), Gaps = 4/80 (5%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSGVSPDYSPSSPQFSP-S 315
+SP TSP +SP SPS++PTSP+YSP+SP Y SP+SP S SP +SP+SP +SP S
Sbjct: 1595 TSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTS 1654
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
+SP+ P +SP+S S Y+P
Sbjct: 1655 PSFSPTSPAFSPTSPS-YSP 1673
Score = 82.4 bits (202), Expect = 1e-14
Identities = 45/81 (55%), Positives = 55/81 (67%), Gaps = 10/81 (12%)
Frame = -3
Query: 485 PSSPYSPTSPNY---SP---TSPSYSPTSPSYSPSSPTYSPSSP---YNSGVSPDYSPSS 333
P+S YSPTSP SP TSP +SP SPS++P+SP YSP+SP S SP YSP+S
Sbjct: 1581 PTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTS 1640
Query: 332 PQFSP-STGYSPSQPGYSPSS 273
P FSP S YSP+ P +SP+S
Sbjct: 1641 PGFSPTSPNYSPTSPSFSPTS 1661
Score = 81.6 bits (200), Expect = 2e-14
Identities = 48/92 (52%), Positives = 60/92 (65%), Gaps = 19/92 (20%)
Frame = -3
Query: 485 PSSPYS--PTSPNYSPTSPSYSPTSPS-------------YSPSSPTYSPSSPYNSGVSP 351
PSSP+S PTSP YSPTS SYSPTSP +SP+SP+++P+SP S SP
Sbjct: 1566 PSSPFSANPTSPGYSPTS-SYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSP 1624
Query: 350 DY---SPSSPQFSP-STGYSPSQPGYSPSSTS 267
Y SP+SP +SP S G+SP+ P YSP+S S
Sbjct: 1625 AYGQASPTSPSYSPTSPGFSPTSPNYSPTSPS 1656
[179][TOP]
>UniRef100_Q9HGZ5 DNA-directed RNA polymerase n=2 Tax=Aspergillus RepID=Q9HGZ5_ASPOR
Length = 1748
Score = 93.6 bits (231), Expect = 6e-18
Identities = 44/78 (56%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P+SP +SPTSPNYSPTSPS+SP SP++SP+SP+YSP+SP G + SP+SP S
Sbjct: 1640 PTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAARHLSPTSP---TSPK 1696
Query: 308 YSPSQPGYSPSSTSQYTP 255
Y+P+ PG+SP+S Y+P
Sbjct: 1697 YTPTSPGWSPTSPQTYSP 1714
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/96 (50%), Positives = 61/96 (63%), Gaps = 25/96 (26%)
Frame = -3
Query: 485 PSSPYSPT---------------------SPNYSPTSPSYSPTSPSY---SPSSPTYSPS 378
PSS YSPT SP+++PTSP+YSPTSP+Y SP+SP+YSP+
Sbjct: 1582 PSSSYSPTSPGMAMTSPRFSMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPT 1641
Query: 377 SPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 273
SP S SP+YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1642 SPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1677
Score = 79.7 bits (195), Expect = 9e-14
Identities = 45/88 (51%), Positives = 58/88 (65%), Gaps = 14/88 (15%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGVSPDY- 345
P+SP +SPTSP+YSPTSP+ SPTSP Y+P+SP +SP+SP S SP++
Sbjct: 1661 PASPAFSPTSPSYSPTSPAIGGAARHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFA 1720
Query: 344 -SPSSPQFSPSTGYSPSQPGYSPSSTSQ 264
SP+SP S GYSP+ P +SPSS Q
Sbjct: 1721 GSPTSPGGPTSPGYSPTSPAFSPSSPRQ 1748
Score = 77.4 bits (189), Expect = 5e-13
Identities = 48/90 (53%), Positives = 61/90 (67%), Gaps = 13/90 (14%)
Frame = -3
Query: 485 PSSPYS--PTSPNYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYNSGVSPDYSPSS 333
PSSP+S PTSP YSP+S SYSPTSP +S +SP +SP+SP + SP YSP+S
Sbjct: 1567 PSSPFSANPTSPGYSPSS-SYSPTSPGMAMTSPRFSMTSPGFSPASPSFAPTSPAYSPTS 1625
Query: 332 P---QFSP-STGYSPSQPGYSPSSTSQYTP 255
P Q SP S YSP+ PG+SP+S + Y+P
Sbjct: 1626 PAYGQASPTSPSYSPTSPGFSPTSPN-YSP 1654
Score = 70.9 bits (172), Expect = 4e-11
Identities = 42/78 (53%), Positives = 55/78 (70%), Gaps = 5/78 (6%)
Frame = -3
Query: 473 YSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSP 300
YSP+SP + +PTSP YSP+S SYSP+SP + +SP S SP +SP+SP F+P S YSP
Sbjct: 1565 YSPSSPFSANPTSPGYSPSS-SYSPTSPGMAMTSPRFSMTSPGFSPASPSFAPTSPAYSP 1623
Query: 299 SQPGY---SPSSTSQYTP 255
+ P Y SP+S S Y+P
Sbjct: 1624 TSPAYGQASPTSPS-YSP 1640
Score = 67.8 bits (164), Expect = 4e-10
Identities = 37/71 (52%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
SP + + YSP+SP S +PTSP YSPSS +YSP+SP + SP +S +SP FSP S +
Sbjct: 1556 SPAATSPAGYSPSSPFSANPTSPGYSPSS-SYSPTSPGMAMTSPRFSMTSPGFSPASPSF 1614
Query: 305 SPSQPGYSPSS 273
+P+ P YSP+S
Sbjct: 1615 APTSPAYSPTS 1625
[180][TOP]
>UniRef100_B2AA31 DNA-directed RNA polymerase n=1 Tax=Podospora anserina
RepID=B2AA31_PODAN
Length = 1748
Score = 93.6 bits (231), Expect = 6e-18
Identities = 50/85 (58%), Positives = 63/85 (74%), Gaps = 6/85 (7%)
Frame = -3
Query: 485 PSSP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPD-YSPSSPQF-- 324
P+SP SPTSP+YSPTSPSYSP SP++ +SP+YSP+SP S SPD YSP+SP F
Sbjct: 1654 PTSPAQFQSPTSPSYSPTSPSYSPASPAFQATSPSYSPASPNWSPTSPDAYSPTSPTFQR 1713
Query: 323 SPSTGYSPSQPGYSPSSTSQYTPQT 249
SP SP+ PGYSP+S S ++P+T
Sbjct: 1714 SPGQQMSPTSPGYSPTSPS-FSPRT 1737
Score = 87.0 bits (214), Expect = 6e-16
Identities = 46/93 (49%), Positives = 59/93 (63%), Gaps = 16/93 (17%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPS-------------YSPTSPSYSPSSPTYSPSSPYNSGVSPD 348
P+SP YSPTSP+YSP SP+ SPTSPSYSP+SP+YSP+SP SP
Sbjct: 1629 PTSPSYSPTSPSYSPASPAATRHYSPTSPAQFQSPTSPSYSPTSPSYSPASPAFQATSPS 1688
Query: 347 YSPSSPQFSPST--GYSPSQPGYSPSSTSQYTP 255
YSP+SP +SP++ YSP+ P + S Q +P
Sbjct: 1689 YSPASPNWSPTSPDAYSPTSPTFQRSPGQQMSP 1721
Score = 86.7 bits (213), Expect = 7e-16
Identities = 48/101 (47%), Positives = 62/101 (61%), Gaps = 25/101 (24%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSY---SPTSPSYSPSSPTYSPSSP-------------YNSGVS 354
SSP +SP+SP++SPTSP SPTSPSYSP+SP+YSP+SP + S S
Sbjct: 1606 SSPQFSPSSPSFSPTSPMLRPGSPTSPSYSPTSPSYSPASPAATRHYSPTSPAQFQSPTS 1665
Query: 353 PDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTP 255
P YSP+SP +SP S YSP+ P +SP+S Y+P
Sbjct: 1666 PSYSPTSPSYSPASPAFQATSPSYSPASPNWSPTSPDAYSP 1706
Score = 68.6 bits (166), Expect = 2e-10
Identities = 49/97 (50%), Positives = 57/97 (58%), Gaps = 15/97 (15%)
Frame = -3
Query: 485 PSSPY--SPTSP---NYSPTSPS--YSPTSPSYSP-----SSPTYSPSSPYNSGVSPDYS 342
P+SP+ SPTSP YSPTSP+ YSPTSP SSP +SPSSP S SP
Sbjct: 1566 PTSPFTTSPTSPFSYGYSPTSPAAGYSPTSPLIDAGGRFASSPQFSPSSPSFSPTSPMLR 1625
Query: 341 PSSPQFSPSTGYSPSQPGYSPSS---TSQYTPQTNDQ 240
P SP SPS YSP+ P YSP+S T Y+P + Q
Sbjct: 1626 PGSPT-SPS--YSPTSPSYSPASPAATRHYSPTSPAQ 1659
Score = 61.6 bits (148), Expect = 3e-08
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 24/83 (28%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP--YN----------------- 366
P+SP YSPTSP+YSP SP++ TSPSYSP+SP +SP+SP Y+
Sbjct: 1663 PTSPSYSPTSPSYSPASPAFQATSPSYSPASPNWSPTSPDAYSPTSPTFQRSPGQQMSPT 1722
Query: 365 ----SGVSPDYSPSSPQFSPSTG 309
S SP +SP +P + +G
Sbjct: 1723 SPGYSPTSPSFSPRTPGRAAGSG 1745
[181][TOP]
>UniRef100_B0XMU6 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus
RepID=B0XMU6_ASPFC
Length = 1750
Score = 93.6 bits (231), Expect = 6e-18
Identities = 50/99 (50%), Positives = 62/99 (62%), Gaps = 22/99 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNY---SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 318
P+SP YSPTSP Y SPTSPSYSPTSP +SP+SP YSP+SP S SP +SP+SP +SP
Sbjct: 1615 PTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSP 1674
Query: 317 ------------------STGYSPSQPGYSPSSTSQYTP 255
S Y+P+ PG+SP+S Y+P
Sbjct: 1675 TSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSP 1713
Score = 85.9 bits (211), Expect = 1e-15
Identities = 43/80 (53%), Positives = 58/80 (72%), Gaps = 4/80 (5%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSGVSPDYSPSSPQFSP-S 315
+SP TSP +SP SPS++PTSP+YSP+SP Y SP+SP S SP +SP+SP +SP S
Sbjct: 1596 TSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTS 1655
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
+SP+ P +SP+S S Y+P
Sbjct: 1656 PSFSPASPAFSPTSPS-YSP 1674
Score = 82.4 bits (202), Expect = 1e-14
Identities = 45/81 (55%), Positives = 55/81 (67%), Gaps = 10/81 (12%)
Frame = -3
Query: 485 PSSPYSPTSPNY---SP---TSPSYSPTSPSYSPSSPTYSPSSP---YNSGVSPDYSPSS 333
P+S YSPTSP SP TSP +SP SPS++P+SP YSP+SP S SP YSP+S
Sbjct: 1582 PTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTS 1641
Query: 332 PQFSP-STGYSPSQPGYSPSS 273
P FSP S YSP+ P +SP+S
Sbjct: 1642 PGFSPTSPNYSPTSPSFSPAS 1662
Score = 81.6 bits (200), Expect = 2e-14
Identities = 48/92 (52%), Positives = 60/92 (65%), Gaps = 19/92 (20%)
Frame = -3
Query: 485 PSSPYS--PTSPNYSPTSPSYSPTSPS-------------YSPSSPTYSPSSPYNSGVSP 351
PSSP+S PTSP YSPTS SYSPTSP +SP+SP+++P+SP S SP
Sbjct: 1567 PSSPFSANPTSPGYSPTS-SYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSP 1625
Query: 350 DY---SPSSPQFSP-STGYSPSQPGYSPSSTS 267
Y SP+SP +SP S G+SP+ P YSP+S S
Sbjct: 1626 AYGQASPTSPSYSPTSPGFSPTSPNYSPTSPS 1657
Score = 77.4 bits (189), Expect = 5e-13
Identities = 45/94 (47%), Positives = 60/94 (63%), Gaps = 14/94 (14%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGVSPDY- 345
P+SP +SPTSP+YSPTSP+ SPTSP Y+P+SP +SP+SP S SP++
Sbjct: 1660 PASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFA 1719
Query: 344 -SPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTN 246
SP+SP S GYSP+ P +SPS Y P ++
Sbjct: 1720 GSPTSPGGPTSPGYSPTSPAFSPS----YVPSSS 1749
[182][TOP]
>UniRef100_A1D1U9 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1D1U9_NEOFI
Length = 1750
Score = 93.6 bits (231), Expect = 6e-18
Identities = 50/99 (50%), Positives = 62/99 (62%), Gaps = 22/99 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNY---SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 318
P+SP YSPTSP Y SPTSPSYSPTSP +SP+SP YSP+SP S SP +SP+SP +SP
Sbjct: 1615 PTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSP 1674
Query: 317 ------------------STGYSPSQPGYSPSSTSQYTP 255
S Y+P+ PG+SP+S Y+P
Sbjct: 1675 TSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSP 1713
Score = 85.9 bits (211), Expect = 1e-15
Identities = 43/80 (53%), Positives = 58/80 (72%), Gaps = 4/80 (5%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSGVSPDYSPSSPQFSP-S 315
+SP TSP +SP SPS++PTSP+YSP+SP Y SP+SP S SP +SP+SP +SP S
Sbjct: 1596 TSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTS 1655
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
+SP+ P +SP+S S Y+P
Sbjct: 1656 PSFSPASPAFSPTSPS-YSP 1674
Score = 82.4 bits (202), Expect = 1e-14
Identities = 45/81 (55%), Positives = 55/81 (67%), Gaps = 10/81 (12%)
Frame = -3
Query: 485 PSSPYSPTSPNY---SP---TSPSYSPTSPSYSPSSPTYSPSSP---YNSGVSPDYSPSS 333
P+S YSPTSP SP TSP +SP SPS++P+SP YSP+SP S SP YSP+S
Sbjct: 1582 PTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTS 1641
Query: 332 PQFSP-STGYSPSQPGYSPSS 273
P FSP S YSP+ P +SP+S
Sbjct: 1642 PGFSPTSPNYSPTSPSFSPAS 1662
Score = 81.6 bits (200), Expect = 2e-14
Identities = 48/92 (52%), Positives = 60/92 (65%), Gaps = 19/92 (20%)
Frame = -3
Query: 485 PSSPYS--PTSPNYSPTSPSYSPTSPS-------------YSPSSPTYSPSSPYNSGVSP 351
PSSP+S PTSP YSPTS SYSPTSP +SP+SP+++P+SP S SP
Sbjct: 1567 PSSPFSANPTSPGYSPTS-SYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSP 1625
Query: 350 DY---SPSSPQFSP-STGYSPSQPGYSPSSTS 267
Y SP+SP +SP S G+SP+ P YSP+S S
Sbjct: 1626 AYGQASPTSPSYSPTSPGFSPTSPNYSPTSPS 1657
Score = 77.4 bits (189), Expect = 5e-13
Identities = 45/94 (47%), Positives = 60/94 (63%), Gaps = 14/94 (14%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGVSPDY- 345
P+SP +SPTSP+YSPTSP+ SPTSP Y+P+SP +SP+SP S SP++
Sbjct: 1660 PASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFA 1719
Query: 344 -SPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTN 246
SP+SP S GYSP+ P +SPS Y P ++
Sbjct: 1720 GSPTSPGGPTSPGYSPTSPAFSPS----YVPSSS 1749
[183][TOP]
>UniRef100_A1CNZ4 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
RepID=A1CNZ4_ASPCL
Length = 1765
Score = 93.6 bits (231), Expect = 6e-18
Identities = 50/99 (50%), Positives = 62/99 (62%), Gaps = 22/99 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNY---SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 318
P+SP YSPTSP Y SPTSPSYSPTSP +SP+SP YSP+SP S SP +SP+SP +SP
Sbjct: 1622 PTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSP 1681
Query: 317 ------------------STGYSPSQPGYSPSSTSQYTP 255
S Y+P+ PG+SP+S Y+P
Sbjct: 1682 TSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSP 1720
Score = 85.5 bits (210), Expect = 2e-15
Identities = 43/80 (53%), Positives = 58/80 (72%), Gaps = 4/80 (5%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSGVSPDYSPSSPQFSP-S 315
+SP TSP +SP SPS++PTSP+YSP+SP Y SP+SP S SP +SP+SP +SP S
Sbjct: 1603 TSPGFMTSPGFSPVSPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTS 1662
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
+SP+ P +SP+S S Y+P
Sbjct: 1663 PSFSPASPAFSPTSPS-YSP 1681
Score = 77.0 bits (188), Expect = 6e-13
Identities = 43/84 (51%), Positives = 56/84 (66%), Gaps = 14/84 (16%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGVSPDY- 345
P+SP +SPTSP+YSPTSP+ SPTSP Y+P+SP +SP+SP S SP++
Sbjct: 1667 PASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFA 1726
Query: 344 -SPSSPQFSPSTGYSPSQPGYSPS 276
SP+SP S GYSP+ P +SPS
Sbjct: 1727 GSPTSPGGPTSPGYSPTSPAFSPS 1750
Score = 71.2 bits (173), Expect = 3e-11
Identities = 45/96 (46%), Positives = 59/96 (61%), Gaps = 19/96 (19%)
Frame = -3
Query: 485 PSSPYS--PTSPNYSPTSPSYSP-----------------TSPSYSPSSPTYSPSSPYNS 363
P+SP+S PTSP YSPT+ SYSP TSP +SP SP+++P+SP S
Sbjct: 1570 PTSPFSANPTSPGYSPTT-SYSPIAPGITSPRFNTSPGFMTSPGFSPVSPSFAPTSPAYS 1628
Query: 362 GVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 255
SP Y +SP SPS YSP+ PG+SP+S + Y+P
Sbjct: 1629 PTSPAYGQASPT-SPS--YSPTSPGFSPTSPN-YSP 1660
Score = 57.8 bits (138), Expect = 4e-07
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYS 303
SP + + YSPTSP S +PTSP YSP++ +YSP +P G++ +SP F S G+S
Sbjct: 1559 SPAATSPAGYSPTSPFSANPTSPGYSPTT-SYSPIAP---GITSPRFNTSPGFMTSPGFS 1614
Query: 302 PSQPGYSPSSTSQYTP 255
P P ++P+S + Y+P
Sbjct: 1615 PVSPSFAPTSPA-YSP 1629
Score = 57.0 bits (136), Expect = 6e-07
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 10/62 (16%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSP-SYSPTSPSYS--------PSSPTYSPSSPYNSGVSPDYSPS 336
P+SP Y+PTSP +SPTSP +YSPTSP+++ P+SP YSP+SP SP Y P
Sbjct: 1698 PTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSP---AFSPSYVPP 1754
Query: 335 SP 330
P
Sbjct: 1755 PP 1756
[184][TOP]
>UniRef100_C6F0A4 RNA polymerase II (Fragment) n=2 Tax=Plasmodium (Laverania)
RepID=C6F0A4_PLAFA
Length = 202
Score = 93.2 bits (230), Expect = 8e-18
Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST--G 309
S YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP++
Sbjct: 44 SPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVA 103
Query: 308 YSPSQPGYSPSS 273
+ + P YSP S
Sbjct: 104 QNIASPNYSPYS 115
Score = 92.4 bits (228), Expect = 1e-17
Identities = 45/77 (58%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 37 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 96
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P ++ Y+P
Sbjct: 97 SPTSPVAQNIASPNYSP 113
Score = 90.9 bits (224), Expect = 4e-17
Identities = 44/71 (61%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
+S Y+ SP YS TSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 30 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 89
Query: 305 SPSQPGYSPSS 273
SP+ P YSP+S
Sbjct: 90 SPTSPKYSPTS 100
Score = 80.5 bits (197), Expect = 5e-14
Identities = 48/99 (48%), Positives = 57/99 (57%), Gaps = 26/99 (26%)
Frame = -3
Query: 473 YSPTSPNY-------SPTSPS------------------YSPTSPSYSPSSPTYSPSSPY 369
YSPTSP Y SPTSP YS TSP YSP+SP YSP+SP
Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60
Query: 368 NSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
S SP YSP+SP++SP S YSP+ P YSP+S +Y+P
Sbjct: 61 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 98
Score = 74.7 bits (182), Expect = 3e-12
Identities = 45/96 (46%), Positives = 50/96 (52%), Gaps = 15/96 (15%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGVSPDYS 342
P+SP YSPTSP YSPTSP YSPTSP YSP+SP YS +SP S SP YS
Sbjct: 70 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYS 129
Query: 341 PSSPQFSPS---TGYSPSQPGYSPSSTSQYTPQTND 243
SSP + S + P P Y S Q D
Sbjct: 130 ISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 165
[185][TOP]
>UniRef100_P14248 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Plasmodium
falciparum CDC/Honduras RepID=RPB1_PLAFD
Length = 2452
Score = 93.2 bits (230), Expect = 8e-18
Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST--G 309
S YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP++
Sbjct: 2294 SPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVA 2353
Query: 308 YSPSQPGYSPSS 273
+ + P YSP S
Sbjct: 2354 QNIASPNYSPYS 2365
Score = 92.4 bits (228), Expect = 1e-17
Identities = 45/77 (58%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 2287 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2346
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P ++ Y+P
Sbjct: 2347 SPTSPVAQNIASPNYSP 2363
Score = 90.9 bits (224), Expect = 4e-17
Identities = 44/71 (61%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
+S Y+ SP YS TSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 2280 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2339
Query: 305 SPSQPGYSPSS 273
SP+ P YSP+S
Sbjct: 2340 SPTSPKYSPTS 2350
Score = 74.7 bits (182), Expect = 3e-12
Identities = 42/88 (47%), Positives = 53/88 (60%), Gaps = 12/88 (13%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPS-----------YSPSSPTYSPSSPYNSGVSPDYSPS 336
S YSPTSP Y+ + YSPTSP Y+ SP YS +SP S SP YSP+
Sbjct: 2248 SPSYSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPT 2307
Query: 335 SPQFSP-STGYSPSQPGYSPSSTSQYTP 255
SP++SP S YSP+ P YSP+S +Y+P
Sbjct: 2308 SPKYSPTSPKYSPTSPKYSPTS-PKYSP 2334
Score = 74.7 bits (182), Expect = 3e-12
Identities = 45/96 (46%), Positives = 50/96 (52%), Gaps = 15/96 (15%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGVSPDYS 342
P+SP YSPTSP YSPTSP YSPTSP YSP+SP YS +SP S SP YS
Sbjct: 2320 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYS 2379
Query: 341 PSSPQFSPS---TGYSPSQPGYSPSSTSQYTPQTND 243
SSP + S + P P Y S Q D
Sbjct: 2380 ISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 2415
Score = 74.3 bits (181), Expect = 4e-12
Identities = 45/110 (40%), Positives = 58/110 (52%), Gaps = 33/110 (30%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPS--------------------------------YSPTSPSYSP 402
P ++ SP+YSPTSP+ YS TSP YSP
Sbjct: 2240 PQINHNIYSPSYSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSP 2299
Query: 401 SSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
+SP YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S +Y+P
Sbjct: 2300 TSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 2348
[186][TOP]
>UniRef100_Q2HDK0 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
RepID=Q2HDK0_CHAGB
Length = 1756
Score = 92.4 bits (228), Expect = 1e-17
Identities = 51/92 (55%), Positives = 64/92 (69%), Gaps = 6/92 (6%)
Frame = -3
Query: 485 PSSPY---SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPD-YSPSSPQF-- 324
P+SP SPTSP+YSPTSPSYSP SP+ +SP+YSP+SP S SPD YSP+SP F
Sbjct: 1652 PTSPQQFNSPTSPSYSPTSPSYSPASPNLHATSPSYSPASPTWSPTSPDAYSPTSPSFHR 1711
Query: 323 SPSTGYSPSQPGYSPSSTSQYTPQTNDQDERG 228
SP SP+ PGYSP+S S ++P+T + G
Sbjct: 1712 SPGQQMSPTSPGYSPTSPS-FSPRTPGRGPSG 1742
Score = 88.2 bits (217), Expect = 3e-16
Identities = 47/96 (48%), Positives = 57/96 (59%), Gaps = 22/96 (22%)
Frame = -3
Query: 476 PYSPTSPNYSPTSPSYSP--------------------TSPSYSPSSPTYSPSSPYNSGV 357
P SPTSPNYSPTSPSYSP TSPSYSP+SP+YSP+SP
Sbjct: 1624 PGSPTSPNYSPTSPSYSPASPAATRHYSPTSPQQFNSPTSPSYSPTSPSYSPASPNLHAT 1683
Query: 356 SPDYSPSSPQFSPST--GYSPSQPGYSPSSTSQYTP 255
SP YSP+SP +SP++ YSP+ P + S Q +P
Sbjct: 1684 SPSYSPASPTWSPTSPDAYSPTSPSFHRSPGQQMSP 1719
Score = 87.0 bits (214), Expect = 6e-16
Identities = 48/101 (47%), Positives = 63/101 (62%), Gaps = 25/101 (24%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSY---SPTSPSYSPSSPTYSPSSP-------------YNSGVS 354
SSP +SP+SP++SPTSP SPTSP+YSP+SP+YSP+SP +NS S
Sbjct: 1604 SSPQFSPSSPSFSPTSPMLRPGSPTSPNYSPTSPSYSPASPAATRHYSPTSPQQFNSPTS 1663
Query: 353 PDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTP 255
P YSP+SP +SP S YSP+ P +SP+S Y+P
Sbjct: 1664 PSYSPTSPSYSPASPNLHATSPSYSPASPTWSPTSPDAYSP 1704
Score = 68.9 bits (167), Expect = 2e-10
Identities = 48/113 (42%), Positives = 63/113 (55%), Gaps = 37/113 (32%)
Frame = -3
Query: 482 SSPYS--PTSP-----NYSPTSPS-YSPT------------SPSYSPSSPTYSPSSPY-- 369
+SP+S PTSP YSPTSP+ YSPT SP +SPSSP++SP+SP
Sbjct: 1564 TSPFSTSPTSPFSYGGGYSPTSPAGYSPTSPLLDAGGRYASSPQFSPSSPSFSPTSPMLR 1623
Query: 368 -NSGVSPDYSPSSPQFSPSTG--------------YSPSQPGYSPSSTSQYTP 255
S SP+YSP+SP +SP++ SP+ P YSP+S S Y+P
Sbjct: 1624 PGSPTSPNYSPTSPSYSPASPAATRHYSPTSPQQFNSPTSPSYSPTSPS-YSP 1675
Score = 60.8 bits (146), Expect = 4e-08
Identities = 37/77 (48%), Positives = 45/77 (58%), Gaps = 13/77 (16%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSP-SYSPTSPSY--------SPSSPTYSPSSPYNSGVSPDYSPSSP 330
S YSP SP +SPTSP +YSPTSPS+ SP+SP YSP+ SP +SP +P
Sbjct: 1684 SPSYSPASPTWSPTSPDAYSPTSPSFHRSPGQQMSPTSPGYSPT-------SPSFSPRTP 1736
Query: 329 QFSPSTG----YSPSQP 291
PS G YSP+ P
Sbjct: 1737 GRGPSGGSGDQYSPTSP 1753
Score = 57.0 bits (136), Expect = 6e-07
Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Frame = -3
Query: 485 PSSP--YSPTSPNY--------SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
P+SP YSPTSP++ SPTSP YSPTSPS+SP +P PS G YSP+
Sbjct: 1696 PTSPDAYSPTSPSFHRSPGQQMSPTSPGYSPTSPSFSPRTPGRGPS----GGSGDQYSPT 1751
Query: 335 SP 330
SP
Sbjct: 1752 SP 1753
[187][TOP]
>UniRef100_C6F1F6 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F6_PLAVI
Length = 211
Score = 91.7 bits (226), Expect = 2e-17
Identities = 45/70 (64%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY- 306
S YS TSP SPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SPS+
Sbjct: 53 SPVYSVTSPKXSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVP 112
Query: 305 -SPSQPGYSP 279
+PS P YSP
Sbjct: 113 NNPSSPHYSP 122
Score = 83.2 bits (204), Expect = 8e-15
Identities = 42/74 (56%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 297
+S SP YS TSP SPTSP YSP+SP YSP+SP S SP YSP+SP++SP S YSPS
Sbjct: 49 HSVVSPVYSVTSPKXSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPS 108
Query: 296 QPGYSPSSTSQYTP 255
P + S+ Y+P
Sbjct: 109 SPVPNNPSSPHYSP 122
Score = 75.9 bits (185), Expect = 1e-12
Identities = 47/90 (52%), Positives = 52/90 (57%), Gaps = 20/90 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY-NSGVSPDYSP--------- 339
P+SP YSPTSP YSPTSP YSPTSP YSP+SP YSPSSP N+ SP YSP
Sbjct: 72 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSPYAIASPKFS 131
Query: 338 --------SSPQFSPS-TGYSPSQPGYSPS 276
SSP + S S SQ SP+
Sbjct: 132 PTSPAYSISSPVYDQSGNARSKSQHPLSPA 161
Score = 73.9 bits (180), Expect = 5e-12
Identities = 44/99 (44%), Positives = 53/99 (53%), Gaps = 21/99 (21%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPS--------------------YSPTSPSYSPSSPTYSPSSPYNS 363
SS + T YSPTSP+ YS TSP SP+SP YSP+SP S
Sbjct: 19 SSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKXSPTSPKYSPTSPKYS 78
Query: 362 GVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 249
SP YSP+SP++SP S YSP+ P YSPSS P +
Sbjct: 79 PTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSS 117
[188][TOP]
>UniRef100_C6F1F5 RNA polymerase II (Fragment) n=1 Tax=Plasmodium fragile
RepID=C6F1F5_PLAFR
Length = 210
Score = 91.7 bits (226), Expect = 2e-17
Identities = 44/70 (62%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY- 306
S YS TSP YSPTSP YSPTSP Y P+SP YSP+SP S SP YSP+SPQ+SP++
Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPIP 112
Query: 305 -SPSQPGYSP 279
+PS P YSP
Sbjct: 113 NNPSSPHYSP 122
Score = 87.8 bits (216), Expect = 3e-16
Identities = 48/80 (60%), Positives = 57/80 (71%), Gaps = 6/80 (7%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY-NSGVSPDYSP---SSPQFS 321
P+SP Y PTSP YSPTSP YSPTSP YSP+SP YSP+SP N+ SP YSP +SP+FS
Sbjct: 72 PTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPIPNNPSSPHYSPYAIASPKFS 131
Query: 320 P-STGYSPSQPGYSPSSTSQ 264
P S YS S P Y S+ ++
Sbjct: 132 PTSPAYSISSPVYDRSANAR 151
Score = 82.8 bits (203), Expect = 1e-14
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 297
+S SP YS TSP YSPTSP YSP+SP Y P+SP S SP YSP+SP++SP S YSP+
Sbjct: 49 HSVVSPVYSVTSPKYSPTSPKYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPT 108
Query: 296 QPGYSPSSTSQYTP 255
P + S+ Y+P
Sbjct: 109 SPIPNNPSSPHYSP 122
Score = 72.8 bits (177), Expect = 1e-11
Identities = 46/117 (39%), Positives = 55/117 (47%), Gaps = 42/117 (35%)
Frame = -3
Query: 473 YSPTSPN---------------------YSPTSPS--------------------YSPTS 417
YSPTSP YSPTSP+ YS TS
Sbjct: 1 YSPTSPTYHLSNNANAGGSAGLNDPKSFYSPTSPTNQLGEMNPNMMKYHSVVSPVYSVTS 60
Query: 416 PSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 249
P YSP+SP YSP+SP SP YSP+SP++SP S YSP+ P YSP+S P +
Sbjct: 61 PKYSPTSPKYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPIPNNPSS 117
[189][TOP]
>UniRef100_B8M2Y2 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC 10500
RepID=B8M2Y2_TALSN
Length = 1755
Score = 91.7 bits (226), Expect = 2e-17
Identities = 50/100 (50%), Positives = 59/100 (59%), Gaps = 23/100 (23%)
Frame = -3
Query: 485 PSSP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
PSSP YSPTSP+Y SPSYSPTSP +SPSSP YSPSSP S SP +SP+SP
Sbjct: 1608 PSSPNFQTTSPAYSPTSPSYQQASPSYSPTSPRFSPSSPNYSPSSPNMSLSSPAFSPTSP 1667
Query: 329 QFSP---------------STGYSPSQPGYSPSSTSQYTP 255
+SP S YSP+ P +SP+S Y+P
Sbjct: 1668 TYSPTSPAIGGTRQFSSPTSPKYSPASPAWSPTSPEIYSP 1707
Score = 88.6 bits (218), Expect = 2e-16
Identities = 46/95 (48%), Positives = 61/95 (64%), Gaps = 6/95 (6%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS-PSTGY 306
S +SP+SPN+ TSP+YSPTSPSY +SP+YSP+SP S SP+YSPSSP S S +
Sbjct: 1603 SPGFSPSSPNFQTTSPAYSPTSPSYQQASPSYSPTSPRFSPSSPNYSPSSPNMSLSSPAF 1662
Query: 305 SPSQPGYSPSS-----TSQYTPQTNDQDERGQD*W 216
SP+ P YSP+S T Q++ T+ + W
Sbjct: 1663 SPTSPTYSPTSPAIGGTRQFSSPTSPKYSPASPAW 1697
Score = 77.4 bits (189), Expect = 5e-13
Identities = 46/102 (45%), Positives = 65/102 (63%), Gaps = 25/102 (24%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-------YNSGVSPDYSPSSP 330
P+SP +SP+SPNYSP+SP+ S +SP++SP+SPTYSP+SP ++S SP YSP+SP
Sbjct: 1636 PTSPRFSPSSPNYSPSSPNMSLSSPAFSPTSPTYSPTSPAIGGTRQFSSPTSPKYSPASP 1695
Query: 329 QFSPSTGY-----------SPSQP---GYSPS---STSQYTP 255
+SP++ SP+ P G SPS ++ QY P
Sbjct: 1696 AWSPTSPEIYSPTSPNIHGSPTSPARGGTSPSYSPTSPQYNP 1737
Score = 74.7 bits (182), Expect = 3e-12
Identities = 38/68 (55%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Frame = -3
Query: 470 SPTSPNYSPTSPSYSPTSPS-YSPSSPTY--SPSSPYNSGVSPDYSPSSPQFSPSTGYSP 300
SPTSP YSP SP++SPTSP YSP+SP SP+SP G SP YSP+SPQ++P+ Y
Sbjct: 1684 SPTSPKYSPASPAWSPTSPEIYSPTSPNIHGSPTSPARGGTSPSYSPTSPQYNPT--YVY 1741
Query: 299 SQPGYSPS 276
+ PG P+
Sbjct: 1742 TNPGEVPA 1749
Score = 73.6 bits (179), Expect = 7e-12
Identities = 47/96 (48%), Positives = 59/96 (61%), Gaps = 26/96 (27%)
Frame = -3
Query: 485 PSSP-YSPTSPN-------YSPTSPSYSPTSPSY-------SPSSPTYSPSSPYNSGVSP 351
PSSP YSP+SPN +SPTSP+YSPTSP+ SP+SP YSP+SP S SP
Sbjct: 1643 PSSPNYSPSSPNMSLSSPAFSPTSPTYSPTSPAIGGTRQFSSPTSPKYSPASPAWSPTSP 1702
Query: 350 D-YSPSSPQF-----SPSTG-----YSPSQPGYSPS 276
+ YSP+SP SP+ G YSP+ P Y+P+
Sbjct: 1703 EIYSPTSPNIHGSPTSPARGGTSPSYSPTSPQYNPT 1738
Score = 63.5 bits (153), Expect = 7e-09
Identities = 41/76 (53%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Frame = -3
Query: 485 PSSP--YSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 315
P SP YSPTSP N SP SP YSP+S SYSP+SP S +SP SP +SPSSP F +
Sbjct: 1559 PQSPGGYSPTSPFNTSPVSPGYSPSS-SYSPASPGMSITSP-RFVTSPGFSPSSPNFQTT 1616
Query: 314 TGYSPSQPGYSPSSTS 267
+ P YSP+S S
Sbjct: 1617 S------PAYSPTSPS 1626
[190][TOP]
>UniRef100_B2W4S0 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2W4S0_PYRTR
Length = 1742
Score = 91.7 bits (226), Expect = 2e-17
Identities = 56/98 (57%), Positives = 67/98 (68%), Gaps = 5/98 (5%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSY-SPTSPSYSPSSPT-YSPSSPYNSGVSPDYSPSSPQF---S 321
P SPTSP+YSPTSP Y SPTSPSYSP+SP YSP+SP S SP+YSP+SP F +
Sbjct: 1601 PGYMASPTSPHYSPTSPRYGSPTSPSYSPTSPAGYSPTSPQYSPTSPNYSPTSPTFMGGA 1660
Query: 320 PSTGYSPSQPGYSPSSTSQYTPQTNDQDERGQD*WRRS 207
S YSP+ P YSP+S QY+P T+ Q + D RRS
Sbjct: 1661 TSPAYSPTSPQYSPTS-PQYSP-TSPQYQATSD--RRS 1694
Score = 91.3 bits (225), Expect = 3e-17
Identities = 52/106 (49%), Positives = 66/106 (62%), Gaps = 24/106 (22%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPS---------YSPTSPSYSPSSPTYSPSSPY----------N 366
P+SP YSPTSPNYSPTSP+ YSPTSP YSP+SP YSP+SP
Sbjct: 1637 PTSPQYSPTSPNYSPTSPTFMGGATSPAYSPTSPQYSPTSPQYSPTSPQYQATSDRRSPT 1696
Query: 365 SGVSPDYSPSSPQFSPST---GYSPSQPGYSPSSTS-QYTPQTNDQ 240
S SP YSP+SP++SP++ +SP+ P YSP+S Y+P + Q
Sbjct: 1697 SPTSPQYSPTSPRYSPTSPAGSFSPTSPRYSPTSPGPAYSPTSPKQ 1742
Score = 87.4 bits (215), Expect = 4e-16
Identities = 48/86 (55%), Positives = 58/86 (67%), Gaps = 15/86 (17%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGVSPDYSPSSPQF-- 324
P+SP YSPTSP YSPTSP+YSPTSP++ +SP YSP+SP S SP YSP+SPQ+
Sbjct: 1629 PTSPAGYSPTSPQYSPTSPNYSPTSPTFMGGATSPAYSPTSPQYSPTSPQYSPTSPQYQA 1688
Query: 323 -----SP----STGYSPSQPGYSPSS 273
SP S YSP+ P YSP+S
Sbjct: 1689 TSDRRSPTSPTSPQYSPTSPRYSPTS 1714
Score = 77.0 bits (188), Expect = 6e-13
Identities = 44/87 (50%), Positives = 52/87 (59%), Gaps = 15/87 (17%)
Frame = -3
Query: 470 SPTSPNYSPTSPSYSPTSPS--------------YSPSSPTYSPSSP-YNSGVSPDYSPS 336
SP SP +SPTSP YSPTSP SP+SP YSP+SP Y S SP YSP+
Sbjct: 1571 SPVSPGFSPTSPGYSPTSPGTASPRFAATSPGYMASPTSPHYSPTSPRYGSPTSPSYSPT 1630
Query: 335 SPQFSPSTGYSPSQPGYSPSSTSQYTP 255
SP GYSP+ P YSP+S + Y+P
Sbjct: 1631 SP-----AGYSPTSPQYSPTSPN-YSP 1651
[191][TOP]
>UniRef100_Q4P7Q0 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis
RepID=Q4P7Q0_USTMA
Length = 1774
Score = 91.3 bits (225), Expect = 3e-17
Identities = 52/101 (51%), Positives = 61/101 (60%), Gaps = 16/101 (15%)
Frame = -3
Query: 482 SSPYSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSP-------------YNSGVSPD 348
S YSPTSP TSPSYSPTSPSYSP+SP YSPSSP Y + SP
Sbjct: 1591 SPAYSPTSPRIFGGATSPSYSPTSPSYSPASPNYSPSSPAGAGYSPSSPAGRYGAATSPQ 1650
Query: 347 YSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDQDERG 228
YSP+SP+FSP S YSP+ P Y+P+S Y+P + RG
Sbjct: 1651 YSPASPKFSPTSPNYSPASPAYTPTS-PVYSPTSPAMAGRG 1690
Score = 87.0 bits (214), Expect = 6e-16
Identities = 43/79 (54%), Positives = 57/79 (72%), Gaps = 3/79 (3%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVS--PDYSPSSPQFSP-ST 312
S YSP SP +SPTSP+YSP SP+Y+P+SP YSP+SP +G +SP+SP +SP S
Sbjct: 1648 SPQYSPASPKFSPTSPNYSPASPAYTPTSPVYSPTSPAMAGRGGGKGFSPTSPAYSPTSP 1707
Query: 311 GYSPSQPGYSPSSTSQYTP 255
YSP+ P +SP+S QY+P
Sbjct: 1708 QYSPASPAFSPTS-PQYSP 1725
Score = 83.2 bits (204), Expect = 8e-15
Identities = 47/101 (46%), Positives = 58/101 (57%), Gaps = 24/101 (23%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSP--------------------TSPSYSPTSPSYSPSSPTYSPSSPY 369
P+SP YSP SPNYSP TSP YSP SP +SP+SP YSP+SP
Sbjct: 1612 PTSPSYSPASPNYSPSSPAGAGYSPSSPAGRYGAATSPQYSPASPKFSPTSPNYSPASPA 1671
Query: 368 NSGVSPDYSPSSPQFS---PSTGYSPSQPGYSPSSTSQYTP 255
+ SP YSP+SP + G+SP+ P YSP+S QY+P
Sbjct: 1672 YTPTSPVYSPTSPAMAGRGGGKGFSPTSPAYSPTS-PQYSP 1711
Score = 79.0 bits (193), Expect = 2e-13
Identities = 38/67 (56%), Positives = 46/67 (68%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQ 294
+SPTSP YSPTSP YSP SP++SP+SP YSP+SP S SP YSP+SP G S
Sbjct: 1695 FSPTSPAYSPTSPQYSPASPAFSPTSPQYSPASPQYSPTSPQYSPTSPAMGMG-GASAGG 1753
Query: 293 PGYSPSS 273
PG + +S
Sbjct: 1754 PGAAAAS 1760
Score = 70.9 bits (172), Expect = 4e-11
Identities = 45/107 (42%), Positives = 53/107 (49%), Gaps = 25/107 (23%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPS------------------SPTYSPSSP--YN 366
P SP +SP SP Y PTSP Y+ S SP YSP+SP +
Sbjct: 1544 PLGAQSPAGYGFSPVSPGYVPTSPGYATSPAGALGGMSPWTGNMGATSPAYSPTSPRIFG 1603
Query: 365 SGVSPDYSPSSPQFSP-STGYSPSQP---GYSPSS-TSQYTPQTNDQ 240
SP YSP+SP +SP S YSPS P GYSPSS +Y T+ Q
Sbjct: 1604 GATSPSYSPTSPSYSPASPNYSPSSPAGAGYSPSSPAGRYGAATSPQ 1650
Score = 63.2 bits (152), Expect = 9e-09
Identities = 28/39 (71%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 372
P+SP YSP SP +SPTSP YSP SP YSP+SP YSP+SP
Sbjct: 1704 PTSPQYSPASPAFSPTSPQYSPASPQYSPTSPQYSPTSP 1742
[192][TOP]
>UniRef100_A6SI63 DNA-directed RNA polymerase n=1 Tax=Botryotinia fuckeliana B05.10
RepID=A6SI63_BOTFB
Length = 1742
Score = 90.9 bits (224), Expect = 4e-17
Identities = 50/88 (56%), Positives = 59/88 (67%), Gaps = 17/88 (19%)
Frame = -3
Query: 485 PSSPY---SPTSPNYSPTSPSYSPTSPSYSPSSPTY-----------SPSSPYNSGVSPD 348
P+SP SPTSP+YSPTSPSYSPTSP+YSP+SP Y SP+SP S SP+
Sbjct: 1642 PTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTSPVYSPTSPN 1701
Query: 347 YSPSSPQF---SPSTGYSPSQPGYSPSS 273
+SPSSPQ S S YSP+ P YSP+S
Sbjct: 1702 WSPSSPQHQGNSTSPKYSPTSPSYSPTS 1729
Score = 88.2 bits (217), Expect = 3e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 16/87 (18%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGVSPDYSPSSPQF-- 324
P+SP SPTSP+YSPTSP+YSPTSP+ SP+SP+YSP+SP S SP+YSP+SP +
Sbjct: 1620 PTSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAG 1679
Query: 323 ---SPSTG-------YSPSQPGYSPSS 273
SP +G YSP+ P +SPSS
Sbjct: 1680 NKVSPGSGLSPTSPVYSPTSPNWSPSS 1706
Score = 87.0 bits (214), Expect = 6e-16
Identities = 48/87 (55%), Positives = 60/87 (68%), Gaps = 16/87 (18%)
Frame = -3
Query: 485 PSSP-YSPTSPNY-SPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGVSPDYSPSSPQFSP 318
P+SP YSPTSP++ SPTSPSYSPTSP+YSP+SP SP+SP S SP YSP+SP +SP
Sbjct: 1613 PTSPAYSPTSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSP 1672
Query: 317 S------------TGYSPSQPGYSPSS 273
+ +G SP+ P YSP+S
Sbjct: 1673 TSPNYAGNKVSPGSGLSPTSPVYSPTS 1699
Score = 81.3 bits (199), Expect = 3e-14
Identities = 47/111 (42%), Positives = 64/111 (57%), Gaps = 34/111 (30%)
Frame = -3
Query: 485 PSSPY--SPTSPNYSPTSPSYSPT---------------------SPSYSPSSPTYSPSS 375
P+SP+ SP+SPN+SP+SP YSPT SP+++P+SP YSP+S
Sbjct: 1563 PTSPFNASPSSPNFSPSSPGYSPTSPMMGGGASPGYAVSPRFSPVSPAFTPTSPAYSPTS 1622
Query: 374 P-YNSGVSPDYSPSSPQFSP----------STGYSPSQPGYSPSSTSQYTP 255
P + S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1623 PSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPN-YSP 1672
Score = 75.1 bits (183), Expect = 2e-12
Identities = 42/78 (53%), Positives = 51/78 (65%), Gaps = 7/78 (8%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPS----YSPTSPSYSPSSPTYSPSSPYNSG--VSPDYSPSSPQ 327
P+SP YSPTSPNY+ S SPTSP YSP+SP +SPSSP + G SP YSP+SP
Sbjct: 1665 PTSPNYSPTSPNYAGNKVSPGSGLSPTSPVYSPTSPNWSPSSPQHQGNSTSPKYSPTSP- 1723
Query: 326 FSPSTGYSPSQPGYSPSS 273
YSP+ P +SP+S
Sbjct: 1724 -----SYSPTSPNFSPTS 1736
Score = 62.4 bits (150), Expect = 2e-08
Identities = 31/48 (64%), Positives = 36/48 (75%), Gaps = 10/48 (20%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSP---------TSPSYSPTSPSYSPSSPTYSPSSP 372
P+SP YSPTSPN+SP TSP YSPTSPSYSP+SP +SP+SP
Sbjct: 1690 PTSPVYSPTSPNWSPSSPQHQGNSTSPKYSPTSPSYSPTSPNFSPTSP 1737
[193][TOP]
>UniRef100_UPI000023F34A hypothetical protein FG00916.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023F34A
Length = 1758
Score = 89.7 bits (221), Expect = 9e-17
Identities = 51/106 (48%), Positives = 66/106 (62%), Gaps = 29/106 (27%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPT----------SPSYSPTSPSYSPSSPT----YSPSSP--YNSGV 357
P+SP +SP+SP++SPT SPSYSPTSPSYSP+SP+ YSP+SP +NS
Sbjct: 1604 PTSPSFSPSSPSFSPTSPMLRPTSPASPSYSPTSPSYSPTSPSSPRHYSPTSPAQFNSPT 1663
Query: 356 SPDYSPSSPQFSP------------STGYSPSQPGYSPSSTSQYTP 255
SP YSP+SP +SP S YSP+ P +SP+S Y+P
Sbjct: 1664 SPSYSPASPNYSPTSPNVHGAGGPTSPSYSPASPSWSPTSPEAYSP 1709
Score = 88.6 bits (218), Expect = 2e-16
Identities = 50/97 (51%), Positives = 62/97 (63%), Gaps = 20/97 (20%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSY-------------SPTSPSYSPSSPTYSPSSPYNSG---- 360
P+SP YSPTSP+YSPTSPS SPTSPSYSP+SP YSP+SP G
Sbjct: 1628 PASPSYSPTSPSYSPTSPSSPRHYSPTSPAQFNSPTSPSYSPASPNYSPTSPNVHGAGGP 1687
Query: 359 VSPDYSPSSPQFSPST--GYSPSQPGYSPSSTSQYTP 255
SP YSP+SP +SP++ YSP+ P + S T+Q +P
Sbjct: 1688 TSPSYSPASPSWSPTSPEAYSPTSPTFQRSPTTQQSP 1724
Score = 78.2 bits (191), Expect = 3e-13
Identities = 49/88 (55%), Positives = 55/88 (62%), Gaps = 15/88 (17%)
Frame = -3
Query: 485 PSSP-YSPTSPNY----SPTSPSYSPTSPSYSPSSP-TYSPSSP--------YNSGVSPD 348
P+SP YSPTSPN PTSPSYSP SPS+SP+SP YSP+SP S SP
Sbjct: 1669 PASPNYSPTSPNVHGAGGPTSPSYSPASPSWSPTSPEAYSPTSPTFQRSPTTQQSPTSPS 1728
Query: 347 YSPSSPQFSPST-GYSPSQPGYSPSSTS 267
YSP+SP FSP T G S YSP+S S
Sbjct: 1729 YSPTSPAFSPRTPGPGTSGNQYSPNSPS 1756
Score = 73.6 bits (179), Expect = 7e-12
Identities = 48/99 (48%), Positives = 60/99 (60%), Gaps = 19/99 (19%)
Frame = -3
Query: 485 PSSPYSPTSP-NYSPTSPS--YSPTSP--------SYSPSSPTYSPSSPYNSGVSP---D 348
P S SPTSP +YSPTSP+ YSPTSP Y P+SP++SPSSP S SP
Sbjct: 1566 PFSSTSPTSPFSYSPTSPNMGYSPTSPLIDGGGMGRYGPTSPSFSPSSPSFSPTSPMLRP 1625
Query: 347 YSPSSPQFSP-STGYSPSQPG----YSPSSTSQYTPQTN 246
SP+SP +SP S YSP+ P YSP+S +Q+ T+
Sbjct: 1626 TSPASPSYSPTSPSYSPTSPSSPRHYSPTSPAQFNSPTS 1664
Score = 63.5 bits (153), Expect = 7e-09
Identities = 44/106 (41%), Positives = 55/106 (51%), Gaps = 25/106 (23%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSP-SYSPSSPT--YSPSSPYNSG--------VSPDYSPS 336
++P SP + + S SPTSP SYSP+SP YSP+SP G SP +SPS
Sbjct: 1553 TTPMSPYNRGAASPFSSTSPTSPFSYSPTSPNMGYSPTSPLIDGGGMGRYGPTSPSFSPS 1612
Query: 335 SPQFSP-----------STGYSPSQPGYSPSSTS---QYTPQTNDQ 240
SP FSP S YSP+ P YSP+S S Y+P + Q
Sbjct: 1613 SPSFSPTSPMLRPTSPASPSYSPTSPSYSPTSPSSPRHYSPTSPAQ 1658
[194][TOP]
>UniRef100_C9SR21 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Verticillium
albo-atrum VaMs.102 RepID=C9SR21_9PEZI
Length = 1756
Score = 89.7 bits (221), Expect = 9e-17
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 14/87 (16%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPS---YSPTSPSYSPSSPT----YSPSSP--YNSGVSPDYSPS 336
PSSP +SPTSP + PTSP+ YSPTSPSYSP+SPT YSP+SP +NS SP YSP+
Sbjct: 1609 PSSPSFSPTSPVHRPTSPASPNYSPTSPSYSPTSPTSPRHYSPTSPAQFNSPTSPSYSPA 1668
Query: 335 SPQFSPST----GYSPSQPGYSPSSTS 267
SP +SP++ G P+ P YSP+S S
Sbjct: 1669 SPSYSPTSPNLHGAGPTSPSYSPASPS 1695
Score = 82.8 bits (203), Expect = 1e-14
Identities = 51/113 (45%), Positives = 66/113 (58%), Gaps = 34/113 (30%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSY-------------SPTSPSYSPSSPTYSPSSPYNSG---V 357
P+SP YSPTSP+YSPTSP+ SPTSPSYSP+SP+YSP+SP G
Sbjct: 1626 PASPNYSPTSPSYSPTSPTSPRHYSPTSPAQFNSPTSPSYSPASPSYSPTSPNLHGAGPT 1685
Query: 356 SPDYSPSSPQFSPST-----------------GYSPSQPGYSPSSTSQYTPQT 249
SP YSP+SP +SP++ SP+ P YSP+S S ++P+T
Sbjct: 1686 SPSYSPASPSWSPTSPEHSYSPTSPSFQRPAMQQSPTSPNYSPTSPS-FSPRT 1737
Score = 74.3 bits (181), Expect = 4e-12
Identities = 39/85 (45%), Positives = 54/85 (63%), Gaps = 5/85 (5%)
Frame = -3
Query: 485 PSSPYSPTSPNYS-----PTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 321
P YSPTSP TSP +SP+SPS+SP+SP + P+SP SP+YSP+SP +S
Sbjct: 1584 PGGGYSPTSPLMDGGARYATSPQFSPSSPSFSPTSPVHRPTSP----ASPNYSPTSPSYS 1639
Query: 320 PSTGYSPSQPGYSPSSTSQYTPQTN 246
P++ SP YSP+S +Q+ T+
Sbjct: 1640 PTSPTSPRH--YSPTSPAQFNSPTS 1662
Score = 55.5 bits (132), Expect = 2e-06
Identities = 30/52 (57%), Positives = 39/52 (75%), Gaps = 10/52 (19%)
Frame = -3
Query: 485 PSSP-YSPTSP--NYSPTSPSY-------SPTSPSYSPSSPTYSPSSPYNSG 360
P+SP +SPTSP +YSPTSPS+ SPTSP+YSP+SP++SP +P SG
Sbjct: 1691 PASPSWSPTSPEHSYSPTSPSFQRPAMQQSPTSPNYSPTSPSFSPRTPGPSG 1742
[195][TOP]
>UniRef100_A7EKT1 DNA-directed RNA polymerase n=2 Tax=Sclerotinia sclerotiorum
RepID=A7EKT1_SCLS1
Length = 1746
Score = 89.7 bits (221), Expect = 9e-17
Identities = 49/88 (55%), Positives = 59/88 (67%), Gaps = 17/88 (19%)
Frame = -3
Query: 485 PSSPY---SPTSPNYSPTSPSYSPTSPSYSPSSPTY-----------SPSSPYNSGVSPD 348
P+SP SPTSP+YSPTSPSYSPTSP+YSP+SP Y SP+SP S SP+
Sbjct: 1646 PTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTSPVYSPTSPN 1705
Query: 347 YSPSSPQF---SPSTGYSPSQPGYSPSS 273
+SPSSPQ + S YSP+ P YSP+S
Sbjct: 1706 WSPSSPQHQGNNTSPKYSPTSPSYSPTS 1733
Score = 88.2 bits (217), Expect = 3e-16
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 16/87 (18%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGVSPDYSPSSPQF-- 324
P+SP SPTSP+YSPTSP+YSPTSP+ SP+SP+YSP+SP S SP+YSP+SP +
Sbjct: 1624 PTSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAG 1683
Query: 323 ---SPSTG-------YSPSQPGYSPSS 273
SP +G YSP+ P +SPSS
Sbjct: 1684 NKVSPGSGLSPTSPVYSPTSPNWSPSS 1710
Score = 87.0 bits (214), Expect = 6e-16
Identities = 48/87 (55%), Positives = 60/87 (68%), Gaps = 16/87 (18%)
Frame = -3
Query: 485 PSSP-YSPTSPNY-SPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGVSPDYSPSSPQFSP 318
P+SP YSPTSP++ SPTSPSYSPTSP+YSP+SP SP+SP S SP YSP+SP +SP
Sbjct: 1617 PTSPAYSPTSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSP 1676
Query: 317 S------------TGYSPSQPGYSPSS 273
+ +G SP+ P YSP+S
Sbjct: 1677 TSPNYAGNKVSPGSGLSPTSPVYSPTS 1703
Score = 84.0 bits (206), Expect = 5e-15
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 15/86 (17%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSY-----------SPSSPTYSPSSPYNSGVSPDY- 345
P+SP YSPTSP+YSPTSP+YSPTSP+Y SP+SP YSP+SP S SP +
Sbjct: 1655 PTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTSPVYSPTSPNWSPSSPQHQ 1714
Query: 344 -SPSSPQFSP-STGYSPSQPGYSPSS 273
+ +SP++SP S YSP+ P +SP+S
Sbjct: 1715 GNNTSPKYSPTSPSYSPTSPNFSPTS 1740
Score = 80.5 bits (197), Expect = 5e-14
Identities = 47/111 (42%), Positives = 63/111 (56%), Gaps = 34/111 (30%)
Frame = -3
Query: 485 PSSPY--SPTSPNYSPTSPSYSPT---------------------SPSYSPSSPTYSPSS 375
P+SP+ SPTSP +SP+SP YSPT SP+++P+SP YSP+S
Sbjct: 1567 PTSPFNASPTSPQFSPSSPGYSPTSPMMGGGASPGYSVSPRFSPVSPAFTPTSPAYSPTS 1626
Query: 374 P-YNSGVSPDYSPSSPQFSP----------STGYSPSQPGYSPSSTSQYTP 255
P + S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1627 PSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPN-YSP 1676
Score = 77.8 bits (190), Expect = 3e-13
Identities = 46/97 (47%), Positives = 57/97 (58%), Gaps = 17/97 (17%)
Frame = -3
Query: 485 PSSPYSPTSP-NYSPTSPSYSPTSPSYSPSSPT--------------YSPSSPYNSGVSP 351
P YSPTSP N SPTSP +SP+SP YSP+SP +SP SP + SP
Sbjct: 1561 PGGGYSPTSPFNASPTSPQFSPSSPGYSPTSPMMGGGASPGYSVSPRFSPVSPAFTPTSP 1620
Query: 350 DYSPSSPQF-SP-STGYSPSQPGYSPSSTSQYTPQTN 246
YSP+SP F SP S YSP+ P YSP+S + + T+
Sbjct: 1621 AYSPTSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTS 1657
Score = 68.6 bits (166), Expect = 2e-10
Identities = 39/74 (52%), Positives = 47/74 (63%), Gaps = 21/74 (28%)
Frame = -3
Query: 485 PSSP-YSPTSPNY-----------SPTSPSYSPTSPSYSPSSPT---------YSPSSPY 369
P+SP YSPTSPNY SPTSP YSPTSP++SPSSP YSP+SP
Sbjct: 1669 PTSPNYSPTSPNYAGNKVSPGSGLSPTSPVYSPTSPNWSPSSPQHQGNNTSPKYSPTSPS 1728
Query: 368 NSGVSPDYSPSSPQ 327
S SP++SP+SP+
Sbjct: 1729 YSPTSPNFSPTSPR 1742
[196][TOP]
>UniRef100_C6F0A3 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0A3_PLAFA
Length = 195
Score = 89.4 bits (220), Expect = 1e-16
Identities = 43/72 (59%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST--G 309
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP++
Sbjct: 37 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVA 96
Query: 308 YSPSQPGYSPSS 273
+ + P YSP S
Sbjct: 97 QNIASPNYSPYS 108
Score = 85.5 bits (210), Expect = 2e-15
Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
+S Y+ SP YS TSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 30 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 89
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P ++ Y+P
Sbjct: 90 SPTSPVAQNIASPNYSP 106
Score = 79.3 bits (194), Expect = 1e-13
Identities = 46/93 (49%), Positives = 53/93 (56%), Gaps = 26/93 (27%)
Frame = -3
Query: 473 YSPTSPNY-------SPTSPS------------------YSPTSPSYSPSSPTYSPSSPY 369
YSPTSP Y SPTSP YS TSP YSP+SP YSP+SP
Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60
Query: 368 NSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 273
S SP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 61 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 93
Score = 74.7 bits (182), Expect = 3e-12
Identities = 45/96 (46%), Positives = 50/96 (52%), Gaps = 15/96 (15%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGVSPDYS 342
P+SP YSPTSP YSPTSP YSPTSP YSP+SP YS +SP S SP YS
Sbjct: 63 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYS 122
Query: 341 PSSPQFSPS---TGYSPSQPGYSPSSTSQYTPQTND 243
SSP + S + P P Y S Q D
Sbjct: 123 ISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 158
[197][TOP]
>UniRef100_B0DB45 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0DB45_LACBS
Length = 1742
Score = 89.0 bits (219), Expect = 2e-16
Identities = 45/77 (58%), Positives = 54/77 (70%), Gaps = 7/77 (9%)
Frame = -3
Query: 482 SSPY------SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 321
+SPY +PTSP YSPTSP+ + TSP YSP+SP YSP+SP S SP YSP SP FS
Sbjct: 1586 ASPYYDPSARNPTSPTYSPTSPALNLTSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFS 1645
Query: 320 P-STGYSPSQPGYSPSS 273
P S YSP+ P +SP+S
Sbjct: 1646 PTSPRYSPTSPSFSPAS 1662
Score = 82.8 bits (203), Expect = 1e-14
Identities = 42/66 (63%), Positives = 48/66 (72%), Gaps = 8/66 (12%)
Frame = -3
Query: 485 PSSP-YSPTSP-------NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
P+SP YSPTSP YSPTSP YSPTSPS+SP+SP YSP SP S SP YSP+SP
Sbjct: 1597 PTSPTYSPTSPALNLTSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSP 1656
Query: 329 QFSPST 312
FSP++
Sbjct: 1657 SFSPAS 1662
Score = 79.3 bits (194), Expect = 1e-13
Identities = 35/52 (67%), Positives = 42/52 (80%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 327
S YSPTSP YSPTSPS+SPTSP YSP SP++SP+SP S SP +SP+SP+
Sbjct: 1613 SPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPSFSPASPR 1664
Score = 74.7 bits (182), Expect = 3e-12
Identities = 45/105 (42%), Positives = 59/105 (56%), Gaps = 32/105 (30%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSP----------------------SYSPTSPSYSPSSPT---- 390
PSSP YSPTSP++ P SP + +PTSP+YSP+SP
Sbjct: 1553 PSSPNVYSPTSPSFVPQSPFGGATSPFGTSPYAASPYYDPSARNPTSPTYSPTSPALNLT 1612
Query: 389 ---YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 267
YSP+SP S SP +SP+SP++SP S +SP+ P YSP+S S
Sbjct: 1613 SPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPS 1657
Score = 68.9 bits (167), Expect = 2e-10
Identities = 43/97 (44%), Positives = 55/97 (56%), Gaps = 23/97 (23%)
Frame = -3
Query: 470 SPTSPNYSPTSPS-YSPTSPSYSPSSPTYSPSSPYNSG---VSPDYSPS-----SPQFSP 318
SP P YSP+SP+ YSPTSPS+ P SP +SP+ + SP Y PS SP +SP
Sbjct: 1545 SPGGPGYSPSSPNVYSPTSPSFVPQSPFGGATSPFGTSPYAASPYYDPSARNPTSPTYSP 1604
Query: 317 --------STGYSPSQPGYSPSSTS------QYTPQT 249
S GYSP+ P YSP+S S +Y+PQ+
Sbjct: 1605 TSPALNLTSPGYSPTSPRYSPTSPSFSPTSPRYSPQS 1641
Score = 66.2 bits (160), Expect = 1e-09
Identities = 31/50 (62%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSP 339
P+SP +SPTSP YSP SPS+SPTSP YSP+SP++SP+SP +S Y P
Sbjct: 1625 PTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPSFSPASPRCKFLSIIYEP 1674
[198][TOP]
>UniRef100_A5DCV1 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
RepID=A5DCV1_PICGU
Length = 224
Score = 88.2 bits (217), Expect = 3e-16
Identities = 45/81 (55%), Positives = 55/81 (67%), Gaps = 7/81 (8%)
Frame = -3
Query: 476 PYSPT---SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P+ PT SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP+
Sbjct: 124 PHHPTHLLSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPNVAQ 183
Query: 305 ----SPSQPGYSPSSTSQYTP 255
P+ Y PS + TP
Sbjct: 184 LLTNFPTVLTYFPSLLTHVTP 204
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/37 (83%), Positives = 36/37 (97%), Gaps = 1/37 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS 378
P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+
Sbjct: 144 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPN 180
[199][TOP]
>UniRef100_UPI000151A8B4 hypothetical protein PGUG_01106 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151A8B4
Length = 224
Score = 87.4 bits (215), Expect = 4e-16
Identities = 45/81 (55%), Positives = 54/81 (66%), Gaps = 7/81 (8%)
Frame = -3
Query: 476 PYSPT---SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P+ PT SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 124 PHHPTHLLSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPNVAQ 183
Query: 305 ----SPSQPGYSPSSTSQYTP 255
P+ Y PS + TP
Sbjct: 184 LLTNFPTVLTYFPSLLTHVTP 204
Score = 67.8 bits (164), Expect = 4e-10
Identities = 31/37 (83%), Positives = 35/37 (94%), Gaps = 1/37 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS 378
P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+
Sbjct: 144 PTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPN 180
[200][TOP]
>UniRef100_Q8MX30 DNA-directed RNA polymerase (Fragment) n=1 Tax=Naegleria gruberi
RepID=Q8MX30_NAEGR
Length = 1590
Score = 86.7 bits (213), Expect = 7e-16
Identities = 40/57 (70%), Positives = 48/57 (84%), Gaps = 2/57 (3%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 321
PSSP YSPTSP YSP+SP+YSPTSP+YSP+SP YSP+SP S SP+YSP+SP +S
Sbjct: 1534 PSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSPNYSPTSPAYSPTSPNYSPTSPAYS 1590
Score = 85.5 bits (210), Expect = 2e-15
Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 6/74 (8%)
Frame = -3
Query: 485 PSSP-----YSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 324
P+SP YSP+SP NYSPTSP+YSP+SP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1523 PTSPGHQGGYSPSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSPNYSPTSPAYSPTSP-- 1580
Query: 323 SPSTGYSPSQPGYS 282
YSP+ P YS
Sbjct: 1581 ----NYSPTSPAYS 1590
Score = 82.0 bits (201), Expect = 2e-14
Identities = 43/71 (60%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Frame = -3
Query: 470 SPTSPN----YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
SPTSP YSP+SP +YSPTSP+YSPSSP YSP+SP S SP+YSP+SP Y
Sbjct: 1522 SPTSPGHQGGYSPSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSPNYSPTSP------AY 1575
Query: 305 SPSQPGYSPSS 273
SP+ P YSP+S
Sbjct: 1576 SPTSPNYSPTS 1586
Score = 61.2 bits (147), Expect = 3e-08
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN-SGVSPDYSPSSPQFSP-STGYSP 300
+SP+ N + + + SPTSP + YSPSSP N S SP YSPSSP +SP S YSP
Sbjct: 1507 FSPSPYNSAFSPVASSPTSPGHQGG---YSPSSPGNYSPTSPAYSPSSPNYSPTSPAYSP 1563
Query: 299 SQPGYSPSSTSQYTP 255
+ P YSP+S + Y+P
Sbjct: 1564 TSPNYSPTSPA-YSP 1577
[201][TOP]
>UniRef100_C6F0B0 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0B0_PLAFA
Length = 188
Score = 85.5 bits (210), Expect = 2e-15
Identities = 46/82 (56%), Positives = 52/82 (63%), Gaps = 12/82 (14%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSP--------SSPQ 327
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP +SP
Sbjct: 37 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPN 96
Query: 326 FSP----STGYSPSQPGYSPSS 273
+SP S +SP+ P YS SS
Sbjct: 97 YSPYSITSPKFSPTSPAYSISS 118
Score = 82.4 bits (202), Expect = 1e-14
Identities = 40/72 (55%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST--G 309
+S Y+ SP YS TSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP++
Sbjct: 30 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVA 89
Query: 308 YSPSQPGYSPSS 273
+ + P YSP S
Sbjct: 90 QNIASPNYSPYS 101
Score = 77.4 bits (189), Expect = 5e-13
Identities = 46/103 (44%), Positives = 53/103 (51%), Gaps = 22/103 (21%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGV-SPDYSP--------- 339
P+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP + SP+YSP
Sbjct: 49 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFS 108
Query: 338 --------SSPQFSPS---TGYSPSQPGYSPSSTSQYTPQTND 243
SSP + S + P P Y S Q D
Sbjct: 109 PTSPAYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 151
Score = 74.3 bits (181), Expect = 4e-12
Identities = 43/86 (50%), Positives = 51/86 (59%), Gaps = 19/86 (22%)
Frame = -3
Query: 473 YSPTSPNY-------SPTSP-----------SYSPTSPSYSPSSPTYSPSSPYNSGVSPD 348
YSPTSP Y SPTSP Y+ SP YS +SP YSP+SP S SP
Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60
Query: 347 YSPSSPQFSP-STGYSPSQPGYSPSS 273
YSP+SP++SP S YSP+ P YSP+S
Sbjct: 61 YSPTSPKYSPTSPKYSPTSPKYSPTS 86
[202][TOP]
>UniRef100_C7YI77 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7YI77_NECH7
Length = 1750
Score = 85.5 bits (210), Expect = 2e-15
Identities = 48/112 (42%), Positives = 63/112 (56%), Gaps = 27/112 (24%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPS---YSPSSPTYSPSSP-------------YNSGVSP 351
S +SP+SP++SPTSP PTSP+ YSPSSP YSP+SP +NS SP
Sbjct: 1600 SPSFSPSSPSFSPTSPMVRPTSPASPNYSPSSPNYSPASPSSPRHYSPTSPAQFNSPTSP 1659
Query: 350 DYSPSSPQFSP-----------STGYSPSQPGYSPSSTSQYTPQTNDQDERG 228
+YSP+SP +SP S YSP+ P +SP+S Y+P + Q G
Sbjct: 1660 NYSPASPNYSPASPNLHAGGTTSPSYSPASPTWSPTSPEAYSPTSPYQRSPG 1711
Score = 80.9 bits (198), Expect = 4e-14
Identities = 48/93 (51%), Positives = 60/93 (64%), Gaps = 14/93 (15%)
Frame = -3
Query: 485 PSSPY---SPTSPNYSPTSPSYSP----------TSPSYSPSSPTYSPSSPYNSGVSPDY 345
P+SP SPTSPNYSP SP+YSP TSPSYSP+SPT+SP+SP Y
Sbjct: 1647 PTSPAQFNSPTSPNYSPASPNYSPASPNLHAGGTTSPSYSPASPTWSPTSP------EAY 1700
Query: 344 SPSSP-QFSPSTGYSPSQPGYSPSSTSQYTPQT 249
SP+SP Q SP SP+ P YSP+S + ++P+T
Sbjct: 1701 SPTSPYQRSPGAQQSPTSPSYSPTSPA-FSPRT 1732
Score = 79.3 bits (194), Expect = 1e-13
Identities = 47/96 (48%), Positives = 59/96 (61%), Gaps = 19/96 (19%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSY-------------SPTSPSYSPSSPTYSPSSP---YNSGV 357
P+SP YSP+SPNYSP SPS SPTSP+YSP+SP YSP+SP
Sbjct: 1622 PASPNYSPSSPNYSPASPSSPRHYSPTSPAQFNSPTSPNYSPASPNYSPASPNLHAGGTT 1681
Query: 356 SPDYSPSSPQFSPST--GYSPSQPGYSPSSTSQYTP 255
SP YSP+SP +SP++ YSP+ P Y S +Q +P
Sbjct: 1682 SPSYSPASPTWSPTSPEAYSPTSP-YQRSPGAQQSP 1716
Score = 78.2 bits (191), Expect = 3e-13
Identities = 44/85 (51%), Positives = 59/85 (69%), Gaps = 14/85 (16%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPS---YSPTSPSYSPSSPT----YSPSSP--YNSGVSPDYSPS 336
PSSP +SPTSP PTSP+ YSP+SP+YSP+SP+ YSP+SP +NS SP+YSP+
Sbjct: 1605 PSSPSFSPTSPMVRPTSPASPNYSPSSPNYSPASPSSPRHYSPTSPAQFNSPTSPNYSPA 1664
Query: 335 SPQFSPST----GYSPSQPGYSPSS 273
SP +SP++ + P YSP+S
Sbjct: 1665 SPNYSPASPNLHAGGTTSPSYSPAS 1689
Score = 67.0 bits (162), Expect = 6e-10
Identities = 42/92 (45%), Positives = 52/92 (56%), Gaps = 12/92 (13%)
Frame = -3
Query: 485 PSSPYSPTSPN-YSPTSPSYSPTSPSYSPSSPTYSPSSPY----------NSGVSPDYSP 339
P YSPTSPN YSPTSP +SP++SPSSP S SP+YSP
Sbjct: 1570 PGGGYSPTSPNAYSPTSPLVDGGMGGRYATSPSFSPSSPSFSPTSPMVRPTSPASPNYSP 1629
Query: 338 SSPQFSPSTGYSPSQP-GYSPSSTSQYTPQTN 246
SSP +SP+ SPS P YSP+S +Q+ T+
Sbjct: 1630 SSPNYSPA---SPSSPRHYSPTSPAQFNSPTS 1658
Score = 59.3 bits (142), Expect = 1e-07
Identities = 33/61 (54%), Positives = 39/61 (63%), Gaps = 9/61 (14%)
Frame = -3
Query: 485 PSSP-YSPTSPN-YSPTSP-------SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 333
P+SP +SPTSP YSPTSP SPTSPSYSP+SP +SP +P YSP+S
Sbjct: 1687 PASPTWSPTSPEAYSPTSPYQRSPGAQQSPTSPSYSPTSPAFSPRTPGPGSSGNQYSPNS 1746
Query: 332 P 330
P
Sbjct: 1747 P 1747
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSP-SYSPTSP-------SYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 327
S YSP SP +SPTSP +YSPTSP SP+SP+YSP+SP S +P S Q
Sbjct: 1682 SPSYSPASPTWSPTSPEAYSPTSPYQRSPGAQQSPTSPSYSPTSPAFSPRTPGPGSSGNQ 1741
Query: 326 FSPST 312
+SP++
Sbjct: 1742 YSPNS 1746
[203][TOP]
>UniRef100_A8N128 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea okayama7#130
RepID=A8N128_COPC7
Length = 1642
Score = 84.0 bits (206), Expect = 5e-15
Identities = 45/87 (51%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSP-YNSGVSPDYSPSSPQFSPSTG 309
S YSPTSP TSP+YSPTSP +SP+SP YSP SP + S SP+YSP+SP +SP
Sbjct: 1544 SPTYSPTSPIAGLTSPAYSPTSPGFSPTSPNGYSPQSPNFGSPASPNYSPASPSYSP--- 1600
Query: 308 YSPSQPGYSPSSTSQYTPQTNDQDERG 228
+P+ P YSPSS + ++P + D+ G
Sbjct: 1601 -APASPNYSPSSPT-WSPTSPAHDQNG 1625
Score = 74.7 bits (182), Expect = 3e-12
Identities = 44/94 (46%), Positives = 55/94 (58%), Gaps = 17/94 (18%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTSPSYSPTSP-----SYSP--------SSPTYSPSSPYNSGVSP 351
PSSP YSPTSP P SP +PTSP + SP +SPTYSP+SP SP
Sbjct: 1500 PSSPNAYSPTSPGMVPRSPYGAPTSPFSNQYATSPFYDSRRQATSPTYSPTSPIAGLTSP 1559
Query: 350 DYSPSSPQFSPST--GYSPSQPGYSPSSTSQYTP 255
YSP+SP FSP++ GYSP P + ++ Y+P
Sbjct: 1560 AYSPTSPGFSPTSPNGYSPQSPNFGSPASPNYSP 1593
Score = 66.6 bits (161), Expect = 8e-10
Identities = 37/68 (54%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Frame = -3
Query: 485 PSSP--YSPTSPNY-SPTSPSYSPTSPSYSPS--SPTYSPSSPYNSGVSPDYSPSSPQFS 321
P+SP YSP SPN+ SP SP+YSP SPSYSP+ SP YSPSSP S SP + + P +
Sbjct: 1570 PTSPNGYSPQSPNFGSPASPNYSPASPSYSPAPASPNYSPSSPTWSPTSPAHDQNGPTNN 1629
Query: 320 PSTGYSPS 297
S+ Y S
Sbjct: 1630 RSSAYQQS 1637
Score = 62.4 bits (150), Expect = 2e-08
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 22/100 (22%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYNS------------------- 363
S P SP P YSP+SP +YSP+SP P SPY +
Sbjct: 1481 SFPQSPHGAGGMSPGPGYSPSSPNAYSPTSPGMVPRSPYGAPTSPFSNQYATSPFYDSRR 1540
Query: 362 -GVSPDYSPSSPQFS-PSTGYSPSQPGYSPSSTSQYTPQT 249
SP YSP+SP S YSP+ PG+SP+S + Y+PQ+
Sbjct: 1541 QATSPTYSPTSPIAGLTSPAYSPTSPGFSPTSPNGYSPQS 1580
[204][TOP]
>UniRef100_Q9FI54 Genomic DNA, chromosome 5, TAC clone:K3K7 n=1 Tax=Arabidopsis
thaliana RepID=Q9FI54_ARATH
Length = 314
Score = 81.6 bits (200), Expect = 2e-14
Identities = 43/85 (50%), Positives = 49/85 (57%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYS 303
S YSPTSP+YSPTSPSY P S S SP S +YSP SP +S VSP YSP+S SP
Sbjct: 110 SPTYSPTSPSYSPTSPSYRPNSSSDSPDSHSYSPVSPDHSLVSPQYSPTSTHHSPILSSP 169
Query: 302 PSQPGYSPSSTSQYTPQTNDQDERG 228
P GY P +T+ E G
Sbjct: 170 PEDYGYGPDDIEAGKMKTDQLKEIG 194
[205][TOP]
>UniRef100_B9PMD7 DNA-directed RNA polymerase n=2 Tax=Toxoplasma gondii
RepID=B9PMD7_TOXGO
Length = 1892
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/87 (50%), Positives = 55/87 (63%), Gaps = 10/87 (11%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSG---VSPDYSPSSPQFSP 318
P+SP SP SP YSPTSP YSPTSP YSP+ YSP SP Y +G +SP ++ SP++SP
Sbjct: 1751 PTSPTSPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQGPLSPSFTVQSPRYSP 1810
Query: 317 ST--GYSPSQP----GYSPSSTSQYTP 255
S+ YSP+ P SPS + P
Sbjct: 1811 SSPAAYSPTSPMPNVAGSPSYEDSHAP 1837
Score = 67.0 bits (162), Expect = 6e-10
Identities = 41/90 (45%), Positives = 49/90 (54%), Gaps = 17/90 (18%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYN----------------SGVSPDY 345
YSPTSP SP SYSP+SP SYSP+SP YSP+S + S SP
Sbjct: 1671 YSPTSPTLSP---SYSPSSPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPFSPSN 1727
Query: 344 SPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 255
+P SP FS ST YSP+ P + TS +P
Sbjct: 1728 NPMSPHFSASTSYSPTSPVQQSNPTSPTSP 1757
Score = 65.5 bits (158), Expect = 2e-09
Identities = 45/113 (39%), Positives = 58/113 (51%), Gaps = 17/113 (15%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSP--SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 312
P SP+ S +YSPTSP +PTSP+ SP SP YSP+SP S SP YSP+ F+P +
Sbjct: 1729 PMSPHFSASTSYSPTSPVQQSNPTSPT-SPYSPAYSPTSPRYSPTSPMYSPT---FAPYS 1784
Query: 311 GYSPS---------------QPGYSPSSTSQYTPQTNDQDERGQD*WRRSMRP 198
SPS P YSPSS + Y+P + + G + S P
Sbjct: 1785 PQSPSYGAGQGPLSPSFTVQSPRYSPSSPAAYSPTSPMPNVAGSPSYEDSHAP 1837
Score = 64.7 bits (156), Expect = 3e-09
Identities = 49/110 (44%), Positives = 56/110 (50%), Gaps = 37/110 (33%)
Frame = -3
Query: 485 PSSP--YSPTSPNYSPTS-----------------------PSYSPTSP------SYSPS 399
PSSP YSPTSP YSPTS PS +P SP SYSP+
Sbjct: 1684 PSSPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPFSPSNNPMSPHFSASTSYSPT 1743
Query: 398 SPTY-----SPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 267
SP SP+SPY SP YSP+SP++SP S YSP+ YSP S S
Sbjct: 1744 SPVQQSNPTSPTSPY----SPAYSPTSPRYSPTSPMYSPTFAPYSPQSPS 1789
Score = 58.5 bits (140), Expect = 2e-07
Identities = 42/101 (41%), Positives = 47/101 (46%), Gaps = 39/101 (38%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPT-------------------------SPSYSPSSPT-Y 387
P SP YSPTSP YSPTSP YSPT SP YSPSSP Y
Sbjct: 1757 PYSPAYSPTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQGPLSPSFTVQSPRYSPSSPAAY 1816
Query: 386 SPSSPY-NSGVSPDY-----------SPSSPQFSPSTGYSP 300
SP+SP N SP Y SP+SP + + +SP
Sbjct: 1817 SPTSPMPNVAGSPSYEDSHAPGGDTYSPTSPMYEANDPFSP 1857
Score = 55.5 bits (132), Expect = 2e-06
Identities = 40/106 (37%), Positives = 50/106 (47%), Gaps = 35/106 (33%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSP----SYSPSSPTYSPSSPYNS--------------- 363
P +P SP SP+ P +SPTSP + SSP+YSPSSP ++
Sbjct: 1597 PRNPLSPLSPS-GPPGGVFSPTSPILGSALETSSPSYSPSSPQSAYFQNDGSSSAVDMVI 1655
Query: 362 ---GVSPD-------YSPSSPQFSPS------TGYSPSQPGYSPSS 273
GV D YSP+SP SPS YSP+ P YSP+S
Sbjct: 1656 SPGGVGSDGRGRGGSYSPTSPTLSPSYSPSSPPSYSPTSPAYSPTS 1701
[206][TOP]
>UniRef100_B6KEC6 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii ME49
RepID=B6KEC6_TOXGO
Length = 1892
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/87 (50%), Positives = 55/87 (63%), Gaps = 10/87 (11%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSG---VSPDYSPSSPQFSP 318
P+SP SP SP YSPTSP YSPTSP YSP+ YSP SP Y +G +SP ++ SP++SP
Sbjct: 1751 PTSPTSPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQGPLSPSFTVQSPRYSP 1810
Query: 317 ST--GYSPSQP----GYSPSSTSQYTP 255
S+ YSP+ P SPS + P
Sbjct: 1811 SSPAAYSPTSPMPNVAGSPSYEDSHAP 1837
Score = 68.9 bits (167), Expect = 2e-10
Identities = 46/119 (38%), Positives = 59/119 (49%), Gaps = 23/119 (19%)
Frame = -3
Query: 485 PSSPYSPTS----------PNYSPTSP--------SYSPTSPSYSPSSPTYSPSSPYNSG 360
P SP+SP++ +YSPTSP SP SP+YSP+SP YSP+SP S
Sbjct: 1719 PLSPFSPSNNPMSPHFSASTSYSPTSPVQQSNPTSPTSPYSPAYSPTSPRYSPTSPMYSP 1778
Query: 359 VSPDYSPSSPQFSPSTG-YSPS----QPGYSPSSTSQYTPQTNDQDERGQD*WRRSMRP 198
YSP SP + G SPS P YSPSS + Y+P + + G + S P
Sbjct: 1779 TFAPYSPQSPSYGAGQGPLSPSFTVQSPRYSPSSPAAYSPTSPMPNVAGSPSYEDSHAP 1837
Score = 65.9 bits (159), Expect = 1e-09
Identities = 40/90 (44%), Positives = 49/90 (54%), Gaps = 17/90 (18%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYN----------------SGVSPDY 345
YSPTSP SP SYSP++P SYSP+SP YSP+S + S SP
Sbjct: 1671 YSPTSPTLSP---SYSPSAPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPFSPSN 1727
Query: 344 SPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 255
+P SP FS ST YSP+ P + TS +P
Sbjct: 1728 NPMSPHFSASTSYSPTSPVQQSNPTSPTSP 1757
Score = 58.5 bits (140), Expect = 2e-07
Identities = 42/101 (41%), Positives = 47/101 (46%), Gaps = 39/101 (38%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPT-------------------------SPSYSPSSPT-Y 387
P SP YSPTSP YSPTSP YSPT SP YSPSSP Y
Sbjct: 1757 PYSPAYSPTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQGPLSPSFTVQSPRYSPSSPAAY 1816
Query: 386 SPSSPY-NSGVSPDY-----------SPSSPQFSPSTGYSP 300
SP+SP N SP Y SP+SP + + +SP
Sbjct: 1817 SPTSPMPNVAGSPSYEDSHAPGGDTYSPTSPMYEANDPFSP 1857
Score = 55.5 bits (132), Expect = 2e-06
Identities = 40/106 (37%), Positives = 50/106 (47%), Gaps = 35/106 (33%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSP----SYSPSSPTYSPSSPYNS--------------- 363
P +P SP SP+ P +SPTSP + SSP+YSPSSP ++
Sbjct: 1597 PRNPLSPLSPS-GPPGGVFSPTSPILGSALETSSPSYSPSSPQSAYFQNDGSSSAVDMVI 1655
Query: 362 ---GVSPD-------YSPSSPQFSPS------TGYSPSQPGYSPSS 273
GV D YSP+SP SPS YSP+ P YSP+S
Sbjct: 1656 SPGGVGSDGRGRGGSYSPTSPTLSPSYSPSAPPSYSPTSPAYSPTS 1701
[207][TOP]
>UniRef100_A7TTU2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Vanderwaltozyma
polyspora DSM 70294 RepID=A7TTU2_VANPO
Length = 1311
Score = 76.6 bits (187), Expect = 8e-13
Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 5/68 (7%)
Frame = -3
Query: 479 SPYSP-----TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 315
SP SP +SP +SPTSP+YSPTSPSYSP+SP+YSP+S S S YSP+SP +S +
Sbjct: 1211 SPSSPGFGGVSSPGFSPTSPAYSPTSPSYSPTSPSYSPTSTSYSQTSSSYSPTSPSYSQN 1270
Query: 314 TGYSPSQP 291
++P P
Sbjct: 1271 LHHTPKIP 1278
Score = 66.6 bits (161), Expect = 8e-10
Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 14/82 (17%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVS------------PD 348
P+SP YSPTSP+YSPTSPSYSPTS SYS +S +YSP+SP Y+ + P
Sbjct: 1227 PTSPAYSPTSPSYSPTSPSYSPTSTSYSQTSSSYSPTSPSYSQNLHHTPKIPILFRQLPH 1286
Query: 347 YSPSSPQFSPSTGYSPSQPGYS 282
P+SP S + ++ + P YS
Sbjct: 1287 KFPNSPYNSQPSQFTSTFPLYS 1308
Score = 60.5 bits (145), Expect = 6e-08
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = -3
Query: 470 SPTSPNYSP-TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQ 294
SP+SP + +SP +SPTSP+YSP+SP+YSP+SP YSP+S T YS +
Sbjct: 1211 SPSSPGFGGVSSPGFSPTSPAYSPTSPSYSPTSP-------SYSPTS------TSYSQTS 1257
Query: 293 PGYSPSSTS 267
YSP+S S
Sbjct: 1258 SSYSPTSPS 1266
[208][TOP]
>UniRef100_UPI0000F3065A UPI0000F3065A related cluster n=1 Tax=Bos taurus
RepID=UPI0000F3065A
Length = 540
Score = 76.3 bits (186), Expect = 1e-12
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP + P SP + P SP + SP + P SP ++P SP + SPD+ P SP++ P S
Sbjct: 67 PQSPEFEPQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDSQSPDFEPQSPRYEPQSP 126
Query: 311 GYSPSQPGYSPSS------TSQYTPQ 252
GY P PGY P S + +Y PQ
Sbjct: 127 GYEPKSPGYEPRSPGYGTQSPEYEPQ 152
Score = 59.7 bits (143), Expect = 1e-07
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = -3
Query: 485 PSSPYSPT-SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 324
P SP S + SP++ P SP Y P SP Y P SP Y P SP SP+Y P +P+F
Sbjct: 102 PRSPESDSQSPDFEPQSPRYEPQSPGYEPKSPGYEPRSPGYGTQSPEYEPQNPEF 156
Score = 56.2 bits (134), Expect = 1e-06
Identities = 26/75 (34%), Positives = 36/75 (48%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
PS ++P SP SP + P SP Y P SP Y P SP SP Y SP++ P
Sbjct: 96 PSPEFAPRSPESDSQSPDFEPQSPRYEPQSPGYEPKSPGYEPRSPGYGTQSPEYEPQNPE 155
Query: 305 SPSQPGYSPSSTSQY 261
+Q + +S++
Sbjct: 156 FKTQSPEFEAESSKF 170
[209][TOP]
>UniRef100_A9SW33 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SW33_PHYPA
Length = 284
Score = 73.9 bits (180), Expect = 5e-12
Identities = 42/77 (54%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS-------SPQF 324
S PYSP+ SP SP+YSP+ SP SPTYSPS Y S SP YSPS SP +
Sbjct: 158 SPPYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTY 217
Query: 323 SPSTGY-SPSQPGYSPS 276
SPS Y SP P YSPS
Sbjct: 218 SPSPVYKSPPSPSYSPS 234
Score = 67.8 bits (164), Expect = 4e-10
Identities = 42/84 (50%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS-------SPQF 324
S PY+ SP Y SP YSP+ SP SPTYSPS Y S SP YSPS SP +
Sbjct: 146 SPPYASPSPVYE--SPPYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTY 203
Query: 323 SPSTGY-SPSQPGYSPSSTSQYTP 255
SPS Y SP P YSPS + P
Sbjct: 204 SPSPVYKSPPSPTYSPSPVYKSPP 227
Score = 61.6 bits (148), Expect = 3e-08
Identities = 41/85 (48%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS-------SPQ 327
PS P P SP Y SP Y+ SP Y SP YSPS Y S SP YSPS SP
Sbjct: 133 PSCPPPPESPVYE--SPPYASPSPVYE--SPPYSPSPVYKSPPSPTYSPSPVYKSPPSPT 188
Query: 326 FSPSTGY-SPSQPGYSPSSTSQYTP 255
+SPS Y SP P YSPS + P
Sbjct: 189 YSPSPVYKSPPSPTYSPSPVYKSPP 213
Score = 58.5 bits (140), Expect = 2e-07
Identities = 29/50 (58%), Positives = 32/50 (64%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
PS YSP+ SP SP+YSP+ SP SPTYSPS Y S SP YSPS
Sbjct: 185 PSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPSYSPS 234
[210][TOP]
>UniRef100_Q01K81 H0525C06.3 protein n=2 Tax=Oryza sativa RepID=Q01K81_ORYSA
Length = 350
Score = 72.0 bits (175), Expect = 2e-11
Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 15/94 (15%)
Frame = -3
Query: 485 PSSPYSPT----SPNYSPTSPSYSPTSPSYSPS-------SPTYSPSSPYNSGVSPDYSP 339
PS P+SP+ SP+YSP++P SP YSPS SP Y+PS+P+ SPDY+P
Sbjct: 163 PSPPWSPSRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYTPSTPWRRAASPDYAP 222
Query: 338 SSPQFSP----STGYSPSQPGYSPSSTSQYTPQT 249
S+P P S YSPS P +S + YTP T
Sbjct: 223 STPWSPPRRASSPDYSPSTPPRRAASPN-YTPST 255
Score = 65.9 bits (159), Expect = 1e-09
Identities = 41/98 (41%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPS-T 312
+P +P SP +SP YSP++P +SP Y+PS+P SPDYSPSSP SP T
Sbjct: 221 APSTPWSPPRRASSPDYSPSTPPRRAASPNYTPSTPPRRAASPDYSPSSPPRRAASPEYT 280
Query: 311 GYSP----SQPGYSPSSTSQYTPQTNDQDERGQD*WRR 210
SP + P Y+P ST +P +D R WRR
Sbjct: 281 QLSPPRRAASPDYNP-STPPPSPVPSDAGSRTSPPWRR 317
Score = 59.7 bits (143), Expect = 1e-07
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 17/107 (15%)
Frame = -3
Query: 467 PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS----------SPQFSP 318
P P + SP Y+P++P +SP Y+PS+P+ SPD++PS SP +SP
Sbjct: 121 PPPPPRTAASPEYTPSTPWRRAASPDYTPSTPWRRAASPDHAPSPPWSPSRRAASPDYSP 180
Query: 317 ST-GYSPSQPGYSPS------STSQYTPQTNDQDERGQD*WRRSMRP 198
ST + P YSPS ++ YTP T WRR+ P
Sbjct: 181 STPPRRAASPDYSPSTPPRRAASPDYTPSTP---------WRRAASP 218
Score = 58.9 bits (141), Expect = 2e-07
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 18/86 (20%)
Frame = -3
Query: 476 PYSPTSPNYSPTSPSYSPTSPSYSPS-------SPTYSPSSPYN---SGVSPDYSPSS-P 330
P SP+YSP++P SP Y+PS SP Y+PS+P++ SPDYSPS+ P
Sbjct: 184 PRRAASPDYSPSTPPRRAASPDYTPSTPWRRAASPDYAPSTPWSPPRRASSPDYSPSTPP 243
Query: 329 QFSPSTGYSPS-------QPGYSPSS 273
+ + S Y+PS P YSPSS
Sbjct: 244 RRAASPNYTPSTPPRRAASPDYSPSS 269
Score = 54.3 bits (129), Expect = 4e-06
Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 25/81 (30%)
Frame = -3
Query: 485 PSSPYSP----TSPNYSPTSPSYSPTSPSYSPS-------SPTYSPSSPYNSGVSP---- 351
PS+P+SP +SP+YSP++P SP+Y+PS SP YSPSSP SP
Sbjct: 222 PSTPWSPPRRASSPDYSPSTPPRRAASPNYTPSTPPRRAASPDYSPSSPPRRAASPEYTQ 281
Query: 350 ----------DYSPSSPQFSP 318
DY+PS+P SP
Sbjct: 282 LSPPRRAASPDYNPSTPPPSP 302
[211][TOP]
>UniRef100_UPI00004C0623 PREDICTED: similar to zinc finger protein 239 (predicted) isoform 1
n=1 Tax=Canis lupus familiaris RepID=UPI00004C0623
Length = 554
Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP + SP + P SP + SP + P SP ++P SP + SP++ P SP++ P S
Sbjct: 67 PQSPGFESQSPRFEPESPGFESRSPGFVPPSPEFAPRSPDSDSQSPEFEPQSPRYEPQSP 126
Query: 311 GYSPSQPGYSPSSTSQYTPQTNDQDER 231
GY P PGY P S Y P++ + R
Sbjct: 127 GYEPRSPGYEPKSPG-YEPKSPGYEPR 152
Score = 69.7 bits (169), Expect = 9e-11
Identities = 32/72 (44%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 309
PS ++P SP+ SP + P SP Y P SP Y P SP SP Y P SP + P S G
Sbjct: 96 PSPEFAPRSPDSDSQSPEFEPQSPRYEPQSPGYEPRSPGYEPKSPGYEPKSPGYEPRSPG 155
Query: 308 YSPSQPGYSPSS 273
Y PGY P +
Sbjct: 156 YESQSPGYEPQN 167
Score = 67.4 bits (163), Expect = 5e-10
Identities = 34/78 (43%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 306
S + P SP ++P SP SP + P SP Y P SP SP Y P SP + P S GY
Sbjct: 90 SPGFVPPSPEFAPRSPDSDSQSPEFEPQSPRYEPQSPGYEPRSPGYEPKSPGYEPKSPGY 149
Query: 305 SPSQPGYSPSSTSQYTPQ 252
P PGY S + Y PQ
Sbjct: 150 EPRSPGYE-SQSPGYEPQ 166
Score = 65.5 bits (158), Expect = 2e-09
Identities = 34/73 (46%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 PSSPYSPT-SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF-SPST 312
P SP S + SP + P SP Y P SP Y P SP Y P SP SP Y P SP + S S
Sbjct: 102 PRSPDSDSQSPEFEPQSPRYEPQSPGYEPRSPGYEPKSPGYEPKSPGYEPRSPGYESQSP 161
Query: 311 GYSPSQPGYSPSS 273
GY P P + S
Sbjct: 162 GYEPQNPEFKTQS 174
Score = 58.2 bits (139), Expect = 3e-07
Identities = 26/55 (47%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 324
P SP Y P SP Y P SP Y P SP Y P SP Y SP +P++ SP+F
Sbjct: 123 PQSPGYEPRSPGYEPKSPGYEPKSPGYEPRSPGYESQSPGYEPQNPEFKTQSPEF 177
Score = 54.7 bits (130), Expect = 3e-06
Identities = 25/55 (45%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 324
P SP Y P SP Y P SP Y P SP Y SP Y P +P SP++ S +F
Sbjct: 130 PRSPGYEPKSPGYEPKSPGYEPRSPGYESQSPGYEPQNPEFKTQSPEFEAQSSKF 184
[212][TOP]
>UniRef100_Q9AXN1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Botryocladia
uvarioides RepID=Q9AXN1_9FLOR
Length = 1712
Score = 70.9 bits (172), Expect = 4e-11
Identities = 39/94 (41%), Positives = 52/94 (55%), Gaps = 19/94 (20%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSP--------------SYSPTSPSY-SPSSPTYSPSSPYNSGVSP 351
P + YSPTSP ++PTSP +YSPT PSY + +SP Y Y+ G
Sbjct: 1599 PGAQYSPTSPAFTPTSPGYSSATGPGRPGTGAYSPTGPSYNAAASPGYQSGINYSPGSPH 1658
Query: 350 DYSPSSPQFSPST----GYSPSQPGYSPSSTSQY 261
YSP+SP F+P + GYSPS P Y+P ++ Y
Sbjct: 1659 TYSPNSPVFTPRSPAAHGYSPSTPQYNPQGSNPY 1692
[213][TOP]
>UniRef100_UPI0001792AA2 PREDICTED: hypothetical protein n=1 Tax=Acyrthosiphon pisum
RepID=UPI0001792AA2
Length = 649
Score = 70.1 bits (170), Expect = 7e-11
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
SSP Y +SP+Y +SPSY +SPSY SS +Y SSP G SP Y SSP + S+ Y
Sbjct: 463 SSPSYGGSSPSYGGSSPSYGGSSPSYGGSSSSYGGSSPSYGGSSPSYGGSSPSYGSSSLY 522
Query: 305 SPSQPGYSPSSTSQYTP 255
+ + P YS SS+S +P
Sbjct: 523 AGNSPSYSGSSSSYGSP 539
Score = 63.5 bits (153), Expect = 7e-09
Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GY 306
SS Y +SP+Y +SPSY +SPSY SSP+Y +SP G S Y SSP + S+ Y
Sbjct: 380 SSSYGSSSPSYGGSSPSYGGSSPSYGGSSPSYGGNSPSYGGSSHSYGGSSPSYGGSSHSY 439
Query: 305 SPSQPGYSPSSTS 267
S P Y SS S
Sbjct: 440 GGSSPSYGGSSHS 452
Score = 63.2 bits (152), Expect = 9e-09
Identities = 34/73 (46%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF-SPSTGY 306
S Y +SP+Y +S SY +SPSY SSP+Y SSP G SP Y SSP + S+ Y
Sbjct: 436 SHSYGGSSPSYGGSSHSYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSSSY 495
Query: 305 SPSQPGYSPSSTS 267
S P Y SS S
Sbjct: 496 GGSSPSYGGSSPS 508
Score = 60.8 bits (146), Expect = 4e-08
Identities = 33/73 (45%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GY 306
SS Y +S +Y +S SY +SPSY SSP+Y SSP G SP Y +SP + S+ Y
Sbjct: 366 SSSYGGSSSSYGGSSSSYGSSSPSYGGSSPSYGGSSPSYGGSSPSYGGNSPSYGGSSHSY 425
Query: 305 SPSQPGYSPSSTS 267
S P Y SS S
Sbjct: 426 GGSSPSYGGSSHS 438
Score = 60.1 bits (144), Expect = 8e-08
Identities = 33/73 (45%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GY 306
S Y +SP+Y +S SY +SPSY SS +Y SSP G SP Y SSP + S+ Y
Sbjct: 422 SHSYGGSSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSPSYGGSSPSYGGSSPSY 481
Query: 305 SPSQPGYSPSSTS 267
S P Y SS+S
Sbjct: 482 GGSSPSYGGSSSS 494
Score = 58.9 bits (141), Expect = 2e-07
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
SSP Y +S +Y +SPSY +SPSY SSP+Y SS Y +G SP YS SS + + Y
Sbjct: 484 SSPSYGGSSSSYGGSSPSYGGSSPSYGGSSPSYGSSSLY-AGNSPSYSGSSSSYGSPSPY 542
Query: 305 SPSQPGYSP--SSTSQYTPQTN 246
PS SP SS+S P ++
Sbjct: 543 KPSYGSPSPYKSSSSYKAPYSS 564
Score = 56.6 bits (135), Expect = 8e-07
Identities = 36/81 (44%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST--- 312
S Y +S +Y +SPSY +S SY SSP+Y SS G SP Y SSP + S+
Sbjct: 415 SPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSPSYGGSSPSY 474
Query: 311 -GYSPSQPGYSPS---STSQY 261
G SPS G SPS S+S Y
Sbjct: 475 GGSSPSYGGSSPSYGGSSSSY 495
Score = 55.8 bits (133), Expect = 1e-06
Identities = 35/74 (47%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-- 312
SSP Y +SP+Y SPSY +S SY SSP+Y SS G SP Y SS + S+
Sbjct: 400 SSPSYGGSSPSYGGNSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPS 459
Query: 311 --GYSPSQPGYSPS 276
G SPS G SPS
Sbjct: 460 YGGSSPSYGGSSPS 473
Score = 55.5 bits (132), Expect = 2e-06
Identities = 37/74 (50%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Frame = -3
Query: 482 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF---SPS 315
SSP Y SP+Y +S SY +SPSY SS +Y SSP G S Y SSP + SPS
Sbjct: 407 SSPSYGGNSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSPS 466
Query: 314 -TGYSPSQPGYSPS 276
G SPS G SPS
Sbjct: 467 YGGSSPSYGGSSPS 480
[214][TOP]
>UniRef100_Q4UCP5 DNA-directed RNA polymerase n=1 Tax=Theileria annulata
RepID=Q4UCP5_THEAN
Length = 1678
Score = 69.7 bits (169), Expect = 9e-11
Identities = 45/96 (46%), Positives = 56/96 (58%), Gaps = 17/96 (17%)
Frame = -3
Query: 485 PSSPYSPTS-------PNYSPTSP--------SYSPTSPSYSPSSPTYSPSSPYN--SGV 357
P+SP SPTS P YSPTSP + SPTSP YSP+ YSP+SP + S
Sbjct: 1557 PTSPMSPTSAISPVYSPAYSPTSPMSPTSPTSALSPTSPVYSPA---YSPTSPTSAMSPT 1613
Query: 356 SPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQT 249
SP YSP+ SP+ GY+P+ P YSP+ Y+P T
Sbjct: 1614 SPVYSPAYSPTSPNLGYAPTSPVYSPA----YSPTT 1645
Score = 68.9 bits (167), Expect = 2e-10
Identities = 44/87 (50%), Positives = 55/87 (63%), Gaps = 10/87 (11%)
Frame = -3
Query: 485 PSSPYSPTSPN--YSPTSPSYSPTSPSYSPSSPT--YSPSSP-YNSGVSPD-----YSPS 336
P+SP SPTSP SPTSP YSP +YSP+SPT SP+SP Y+ SP Y+P+
Sbjct: 1577 PTSPMSPTSPTSALSPTSPVYSP---AYSPTSPTSAMSPTSPVYSPAYSPTSPNLGYAPT 1633
Query: 335 SPQFSPSTGYSPSQPGYSPSSTSQYTP 255
SP +SP+ YSP+ P Y S TS +P
Sbjct: 1634 SPVYSPA--YSPTTPNYGYSPTSPLSP 1658
Score = 60.5 bits (145), Expect = 6e-08
Identities = 37/70 (52%), Positives = 48/70 (68%), Gaps = 7/70 (10%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPS--YSPSSPTYSPS-SPY--NSGVSPD--YSPSSPQ 327
P+S SPTSP YSP +YSPTSP+ Y+P+SP YSP+ SP N G SP SP+SP
Sbjct: 1606 PTSAMSPTSPVYSP---AYSPTSPNLGYAPTSPVYSPAYSPTTPNYGYSPTSPLSPTSPA 1662
Query: 326 FSPSTGYSPS 297
+SP+ +SP+
Sbjct: 1663 YSPTDPFSPN 1672
Score = 53.1 bits (126), Expect = 9e-06
Identities = 39/82 (47%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ--FSPSTGY 306
SP SPTSP SPTSP SPTSP SP+S + SP YSP+SP SP++
Sbjct: 1541 SPTSPTSP-MSPTSPM-SPTSPM--------SPTSAISPVYSPAYSPTSPMSPTSPTSAL 1590
Query: 305 SPSQPGYSP-----SSTSQYTP 255
SP+ P YSP S TS +P
Sbjct: 1591 SPTSPVYSPAYSPTSPTSAMSP 1612
[215][TOP]
>UniRef100_UPI0000E241DC PREDICTED: hypothetical protein n=1 Tax=Pan troglodytes
RepID=UPI0000E241DC
Length = 1156
Score = 69.3 bits (168), Expect = 1e-10
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP + P SP + P SP + SP P SP ++P SP + SP++ SP++ P S
Sbjct: 676 PQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSP 735
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
GY P PGY P S Y P++
Sbjct: 736 GYEPRSPGYEPRSPG-YEPRS 755
Score = 57.8 bits (138), Expect = 4e-07
Identities = 30/75 (40%), Positives = 36/75 (48%)
Frame = -3
Query: 467 PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPG 288
P SP ++P SP SP + SP Y P SP SP Y P SP GY P PG
Sbjct: 704 PPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPRSP------GYEPRSPG 757
Query: 287 YSPSSTSQYTPQTND 243
Y S +S+Y Q +
Sbjct: 758 YE-SESSRYESQNTE 771
Score = 56.6 bits (135), Expect = 8e-07
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = -3
Query: 446 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTS 267
P SP + P SP + P SP + P SP SP P SP+F+P + S SQ S +
Sbjct: 669 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 728
Query: 266 QYTPQTNDQDER 231
+Y PQ+ + R
Sbjct: 729 RYEPQSPGYEPR 740
[216][TOP]
>UniRef100_B7Z2Y7 cDNA FLJ59521, moderately similar to Zinc finger and SCAN
domain-containing protein 2 n=1 Tax=Homo sapiens
RepID=B7Z2Y7_HUMAN
Length = 453
Score = 69.3 bits (168), Expect = 1e-10
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP + P SP + P SP + SP P SP ++P SP + SP++ SP++ P S
Sbjct: 36 PQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSP 95
Query: 311 GYSPSQPGYSP------SSTSQYTPQTND 243
GY P PGY P S +S+Y Q +
Sbjct: 96 GYEPRSPGYEPRSPGYESESSRYESQNTE 124
Score = 56.6 bits (135), Expect = 8e-07
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = -3
Query: 446 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTS 267
P SP + P SP + P SP + P SP SP P SP+F+P + S SQ S +
Sbjct: 29 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 88
Query: 266 QYTPQTNDQDER 231
+Y PQ+ + R
Sbjct: 89 RYEPQSPGYEPR 100
[217][TOP]
>UniRef100_B2RD90 cDNA, FLJ96507 n=1 Tax=Homo sapiens RepID=B2RD90_HUMAN
Length = 520
Score = 69.3 bits (168), Expect = 1e-10
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP + P SP + P SP + SP P SP ++P SP + SP++ SP++ P S
Sbjct: 47 PQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSP 106
Query: 311 GYSPSQPGYSP------SSTSQYTPQTND 243
GY P PGY P S +S+Y Q +
Sbjct: 107 GYEPRSPGYEPRSPGYESESSRYESQNTE 135
Score = 56.6 bits (135), Expect = 8e-07
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = -3
Query: 446 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTS 267
P SP + P SP + P SP + P SP SP P SP+F+P + S SQ S +
Sbjct: 40 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 99
Query: 266 QYTPQTNDQDER 231
+Y PQ+ + R
Sbjct: 100 RYEPQSPGYEPR 111
[218][TOP]
>UniRef100_Q9H5H4 Zinc finger protein 768 n=1 Tax=Homo sapiens RepID=ZN768_HUMAN
Length = 540
Score = 69.3 bits (168), Expect = 1e-10
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP + P SP + P SP + SP P SP ++P SP + SP++ SP++ P S
Sbjct: 67 PQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSP 126
Query: 311 GYSPSQPGYSP------SSTSQYTPQTND 243
GY P PGY P S +S+Y Q +
Sbjct: 127 GYEPRSPGYEPRSPGYESESSRYESQNTE 155
Score = 56.6 bits (135), Expect = 8e-07
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = -3
Query: 446 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTS 267
P SP + P SP + P SP + P SP SP P SP+F+P + S SQ S +
Sbjct: 60 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 119
Query: 266 QYTPQTNDQDER 231
+Y PQ+ + R
Sbjct: 120 RYEPQSPGYEPR 131
[219][TOP]
>UniRef100_Q4N0F9 DNA-directed RNA polymerase n=1 Tax=Theileria parva
RepID=Q4N0F9_THEPA
Length = 1681
Score = 68.6 bits (166), Expect = 2e-10
Identities = 44/87 (50%), Positives = 55/87 (63%), Gaps = 10/87 (11%)
Frame = -3
Query: 485 PSSPYSPTSPN--YSPTSPSYSPTSPSYSPSSPT--YSPSSP-YNSGVSPD-----YSPS 336
P+SP SPTSP SPTSP YSP +YSP+SPT SP+SP Y+ SP Y+P+
Sbjct: 1580 PTSPMSPTSPANALSPTSPVYSP---AYSPTSPTSAMSPTSPVYSPAYSPTSPNLGYAPT 1636
Query: 335 SPQFSPSTGYSPSQPGYSPSSTSQYTP 255
SP +SP+ YSP+ P Y S TS +P
Sbjct: 1637 SPVYSPA--YSPTSPNYGYSPTSPLSP 1661
Score = 67.4 bits (163), Expect = 5e-10
Identities = 42/87 (48%), Positives = 51/87 (58%), Gaps = 17/87 (19%)
Frame = -3
Query: 485 PSSPYSPTS-------PNYSPTSP--------SYSPTSPSYSPSSPTYSPSSPYN--SGV 357
P SP SPTS P YSPTSP + SPTSP YSP+ YSP+SP + S
Sbjct: 1560 PMSPMSPTSAMSPVYSPAYSPTSPMSPTSPANALSPTSPVYSPA---YSPTSPTSAMSPT 1616
Query: 356 SPDYSPSSPQFSPSTGYSPSQPGYSPS 276
SP YSP+ SP+ GY+P+ P YSP+
Sbjct: 1617 SPVYSPAYSPTSPNLGYAPTSPVYSPA 1643
Score = 61.6 bits (148), Expect = 3e-08
Identities = 38/71 (53%), Positives = 48/71 (67%), Gaps = 8/71 (11%)
Frame = -3
Query: 485 PSSPYSPTSP----NYSPTSPS--YSPTSPSYSPSSPTYSPSSPYNSGVSP--DYSPSSP 330
P+S SPTSP YSPTSP+ Y+PTSP YSP+ YSP+SP N G SP SP+SP
Sbjct: 1609 PTSAMSPTSPVYSPAYSPTSPNLGYAPTSPVYSPA---YSPTSP-NYGYSPTSPLSPTSP 1664
Query: 329 QFSPSTGYSPS 297
+SP+ +SP+
Sbjct: 1665 AYSPTDPFSPN 1675
Score = 61.2 bits (147), Expect = 3e-08
Identities = 41/83 (49%), Positives = 50/83 (60%), Gaps = 13/83 (15%)
Frame = -3
Query: 485 PSSPYSPTSPN--YSPTSP--SYSPT-------SPSYSPSSPTYSPSSPYN--SGVSPDY 345
P+SP SP SP SPTSP SPT SP+YSP+SP SP+SP N S SP Y
Sbjct: 1542 PTSPTSPMSPTSPMSPTSPMSPMSPTSAMSPVYSPAYSPTSP-MSPTSPANALSPTSPVY 1600
Query: 344 SPSSPQFSPSTGYSPSQPGYSPS 276
SP+ SP++ SP+ P YSP+
Sbjct: 1601 SPAYSPTSPTSAMSPTSPVYSPA 1623
Score = 55.5 bits (132), Expect = 2e-06
Identities = 43/82 (52%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF--SPSTGY 306
SP SPTSP SPTSP SPTSP SP SPT + S Y SP YSP+SP SP+
Sbjct: 1541 SPTSPTSP-MSPTSPM-SPTSPM-SPMSPTSAMSPVY----SPAYSPTSPMSPTSPANAL 1593
Query: 305 SPSQP----GYSPSS-TSQYTP 255
SP+ P YSP+S TS +P
Sbjct: 1594 SPTSPVYSPAYSPTSPTSAMSP 1615
[220][TOP]
>UniRef100_Q3JTV6 Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei
1710b RepID=Q3JTV6_BURP1
Length = 364
Score = 67.8 bits (164), Expect = 4e-10
Identities = 51/106 (48%), Positives = 65/106 (61%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 247 PTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 299
Query: 305 SPSQPGYSPSSTSQYTPQTNDQDERGQD*WRRSMRPFEARRSILRF 168
SP+ P S TS +P + R RR + + RR+ LRF
Sbjct: 300 SPTSPTSPTSPTSPTSPTSPTSPGRSDQYDRRGRQVLQGRRNRLRF 345
Score = 58.5 bits (140), Expect = 2e-07
Identities = 43/77 (55%), Positives = 53/77 (68%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 184 PTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 236
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P S TS +P
Sbjct: 237 SPTSPTSPTSPTSPTSP 253
Score = 58.5 bits (140), Expect = 2e-07
Identities = 43/77 (55%), Positives = 53/77 (68%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 187 PTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 239
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P S TS +P
Sbjct: 240 SPTSPTSPTSPTSPTSP 256
Score = 58.5 bits (140), Expect = 2e-07
Identities = 43/77 (55%), Positives = 53/77 (68%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 190 PTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 242
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P S TS +P
Sbjct: 243 SPTSPTSPTSPTSPTSP 259
Score = 58.5 bits (140), Expect = 2e-07
Identities = 43/77 (55%), Positives = 53/77 (68%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 193 PTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 245
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P S TS +P
Sbjct: 246 SPTSPTSPTSPTSPTSP 262
Score = 58.5 bits (140), Expect = 2e-07
Identities = 43/77 (55%), Positives = 53/77 (68%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 196 PTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 248
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P S TS +P
Sbjct: 249 SPTSPTSPTSPTSPTSP 265
Score = 58.5 bits (140), Expect = 2e-07
Identities = 43/77 (55%), Positives = 53/77 (68%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 199 PTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 251
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P S TS +P
Sbjct: 252 SPTSPTSPTSPTSPTSP 268
Score = 58.5 bits (140), Expect = 2e-07
Identities = 43/77 (55%), Positives = 53/77 (68%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 202 PTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 254
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P S TS +P
Sbjct: 255 SPTSPTSPTSPTSPTSP 271
Score = 58.5 bits (140), Expect = 2e-07
Identities = 43/77 (55%), Positives = 53/77 (68%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 205 PTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 257
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P S TS +P
Sbjct: 258 SPTSPTSPTSPTSPTSP 274
Score = 58.5 bits (140), Expect = 2e-07
Identities = 43/77 (55%), Positives = 53/77 (68%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 208 PTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 260
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P S TS +P
Sbjct: 261 SPTSPTSPTSPTSPTSP 277
Score = 58.5 bits (140), Expect = 2e-07
Identities = 43/77 (55%), Positives = 53/77 (68%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 211 PTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 263
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P S TS +P
Sbjct: 264 SPTSPTSPTSPTSPTSP 280
Score = 58.5 bits (140), Expect = 2e-07
Identities = 43/77 (55%), Positives = 53/77 (68%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 214 PTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 266
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P S TS +P
Sbjct: 267 SPTSPTSPTSPTSPTSP 283
Score = 58.5 bits (140), Expect = 2e-07
Identities = 43/77 (55%), Positives = 53/77 (68%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 217 PTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 269
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P S TS +P
Sbjct: 270 SPTSPTSPTSPTSPTSP 286
Score = 58.5 bits (140), Expect = 2e-07
Identities = 43/77 (55%), Positives = 53/77 (68%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 220 PTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 272
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P S TS +P
Sbjct: 273 SPTSPTSPTSPTSPTSP 289
Score = 57.4 bits (137), Expect = 5e-07
Identities = 43/77 (55%), Positives = 52/77 (67%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 181 PVSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 233
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P S TS +P
Sbjct: 234 SPTSPTSPTSPTSPTSP 250
Score = 56.2 bits (134), Expect = 1e-06
Identities = 42/77 (54%), Positives = 51/77 (66%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P P SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 178 PRRPVSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 230
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P S TS +P
Sbjct: 231 SPTSPTSPTSPTSPTSP 247
[221][TOP]
>UniRef100_B1HHT1 Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei
S13 RepID=B1HHT1_BURPS
Length = 282
Score = 67.8 bits (164), Expect = 4e-10
Identities = 51/106 (48%), Positives = 65/106 (61%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 165 PTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 217
Query: 305 SPSQPGYSPSSTSQYTPQTNDQDERGQD*WRRSMRPFEARRSILRF 168
SP+ P S TS +P + R RR + + RR+ LRF
Sbjct: 218 SPTSPTSPTSPTSPTSPTSPTSPGRSDQYDRRGRQVLQGRRNRLRF 263
Score = 58.5 bits (140), Expect = 2e-07
Identities = 43/77 (55%), Positives = 53/77 (68%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 129 PTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 181
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P S TS +P
Sbjct: 182 SPTSPTSPTSPTSPTSP 198
Score = 58.5 bits (140), Expect = 2e-07
Identities = 43/77 (55%), Positives = 53/77 (68%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 132 PTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 184
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P S TS +P
Sbjct: 185 SPTSPTSPTSPTSPTSP 201
Score = 58.5 bits (140), Expect = 2e-07
Identities = 43/77 (55%), Positives = 53/77 (68%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 135 PTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 187
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P S TS +P
Sbjct: 188 SPTSPTSPTSPTSPTSP 204
Score = 58.5 bits (140), Expect = 2e-07
Identities = 43/77 (55%), Positives = 53/77 (68%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 138 PTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 190
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P S TS +P
Sbjct: 191 SPTSPTSPTSPTSPTSP 207
Score = 57.4 bits (137), Expect = 5e-07
Identities = 43/77 (55%), Positives = 52/77 (67%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 126 PVSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 178
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P S TS +P
Sbjct: 179 SPTSPTSPTSPTSPTSP 195
Score = 56.2 bits (134), Expect = 1e-06
Identities = 42/77 (54%), Positives = 51/77 (66%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P P SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 123 PRRPVSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 175
Query: 305 SPSQPGYSPSSTSQYTP 255
SP+ P S TS +P
Sbjct: 176 SPTSPTSPTSPTSPTSP 192
[222][TOP]
>UniRef100_Q25655 RNA polymerase largest subunit (Fragment) n=1 Tax=Plasmodium
berghei RepID=Q25655_PLABE
Length = 204
Score = 67.8 bits (164), Expect = 4e-10
Identities = 42/80 (52%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGVSPDYSPSSPQFSPS 315
S YS TSP YSPTSP YSPTSP +PSSP YSP +SP S SP YS SSP + +
Sbjct: 82 SPVYSVTSPKYSPTSPKYSPTSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKN 141
Query: 314 ---TGYSPSQPGYSPSSTSQ 264
TG +P P Y S Q
Sbjct: 142 ENMTGKNPLSPAYMLQSRVQ 161
Score = 63.9 bits (154), Expect = 5e-09
Identities = 45/98 (45%), Positives = 50/98 (51%), Gaps = 32/98 (32%)
Frame = -3
Query: 482 SSPYSPTSPN--------YSPTSPS-------------------YSPTSPSYSPSSPTYS 384
S YSPTSP YSPTSP YS TSP YSP+SP YS
Sbjct: 41 SPSYSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPKYS 100
Query: 383 PSSPY-NSGVSPDYSP---SSPQFSP-STGYSPSQPGY 285
P+SP N+ SP YSP +SP+FSP S YS S P Y
Sbjct: 101 PTSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 138
Score = 59.3 bits (142), Expect = 1e-07
Identities = 41/95 (43%), Positives = 49/95 (51%), Gaps = 32/95 (33%)
Frame = -3
Query: 461 SPNYSPTSPS--------YSPTSPS-------------------YSPSSPTYSPSSPYNS 363
SP+YSPTSP+ YSPTSP YS +SP YSP+SP S
Sbjct: 41 SPSYSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPKYS 100
Query: 362 GVSP-DYSPSSPQFSP----STGYSPSQPGYSPSS 273
SP +PSSPQ+SP S +SP+ P YS SS
Sbjct: 101 PTSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISS 135
Score = 55.5 bits (132), Expect = 2e-06
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 14/76 (18%)
Frame = -3
Query: 440 SPSYSPTSPSYSPSSPT-YSPSSPYNSG------------VSPDYSPSSPQFSP-STGYS 303
SPSYSPTSP+Y+ ++ YSP+SP N +SP YS +SP++SP S YS
Sbjct: 41 SPSYSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPKYS 100
Query: 302 PSQPGYSPSSTSQYTP 255
P+ P + S+ QY+P
Sbjct: 101 PTSPVPNNPSSPQYSP 116
[223][TOP]
>UniRef100_B4MT78 GK20106 n=1 Tax=Drosophila willistoni RepID=B4MT78_DROWI
Length = 175
Score = 67.8 bits (164), Expect = 4e-10
Identities = 40/105 (38%), Positives = 62/105 (59%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P+SP +PT+P SPT+P+ PTSP+ P+SPT +P++P S SP +P++P SP+T
Sbjct: 26 PTSPTTPTTPPTSPTTPTTPPTSPTTPPTSPT-TPTTPPTSPTSPT-TPTTPPTSPTT-- 81
Query: 305 SPSQPGYSPSSTSQYTPQTNDQDERGQD*WRRSMRPFEARRSILR 171
P+ P SP++ ++ TP T + ++ P E RR R
Sbjct: 82 -PTTPPTSPTTPAETTPTTTQATPKAS-----TLSPAERRRRRFR 120
[224][TOP]
>UniRef100_A4RMP1 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
RepID=A4RMP1_MAGGR
Length = 1757
Score = 67.4 bits (163), Expect = 5e-10
Identities = 51/107 (47%), Positives = 64/107 (59%), Gaps = 19/107 (17%)
Frame = -3
Query: 485 PSSP------YSPTSP---NYSPTSPSYSPTSPSYSP---SSPTYSPSSP-YNSGVSPD- 348
P SP YSPTSP SPTSP YSP SPS+SP +SP Y SP + S SP+
Sbjct: 1642 PGSPTGGDNHYSPTSPAQFGASPTSPLYSPASPSFSPGGATSPMYYVGSPQHASPTSPNA 1701
Query: 347 -YSPSSPQFSPSTGY-SPSQPG-YSPSSTSQYTPQTNDQDER--GQD 222
YSP+SP F S SP+ PG YSP+S S ++P++ ++ R GQD
Sbjct: 1702 HYSPTSPSFQRSPAQASPTSPGPYSPTSPS-FSPRSPGRNNRSGGQD 1747
Score = 65.9 bits (159), Expect = 1e-09
Identities = 42/106 (39%), Positives = 56/106 (52%), Gaps = 33/106 (31%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSP--SYSPT------------SPSYSPSSPTYSPSSP---YNSGV 357
P+SP+S +YSPTSP YSPT SPS+SPSSP++ P+SP + +G
Sbjct: 1570 PTSPFSAGYGSYSPTSPMAGYSPTSPMMDGGRYGASSPSFSPSSPSFQPTSPIMRHGAGD 1629
Query: 356 SPDYSPSSPQFSPST----------------GYSPSQPGYSPSSTS 267
S YSP+SP + P + G SP+ P YSP+S S
Sbjct: 1630 SMGYSPTSPTYQPGSPTGGDNHYSPTSPAQFGASPTSPLYSPASPS 1675
Score = 62.0 bits (149), Expect = 2e-08
Identities = 49/110 (44%), Positives = 57/110 (51%), Gaps = 30/110 (27%)
Frame = -3
Query: 479 SPY-SPTSPNYSPTSP-SYSPTSP------SYSPSSPT--YSPSSPYNSG-----VSPDY 345
+PY S TSP PTSP S SPTSP SYSP+SP YSP+SP G SP +
Sbjct: 1552 NPYGSGTSPR--PTSPFSTSPTSPFSAGYGSYSPTSPMAGYSPTSPMMDGGRYGASSPSF 1609
Query: 344 SPSSPQFSP-----------STGYSPSQPGYSPSS----TSQYTPQTNDQ 240
SPSSP F P S GYSP+ P Y P S + Y+P + Q
Sbjct: 1610 SPSSPSFQPTSPIMRHGAGDSMGYSPTSPTYQPGSPTGGDNHYSPTSPAQ 1659
Score = 55.8 bits (133), Expect = 1e-06
Identities = 34/60 (56%), Positives = 39/60 (65%), Gaps = 13/60 (21%)
Frame = -3
Query: 470 SPTSPN--YSPTSPSY-------SPTSPS-YSPSSPTYSPSSP---YNSGVSPDYSPSSP 330
SPTSPN YSPTSPS+ SPTSP YSP+SP++SP SP SG YSP+SP
Sbjct: 1695 SPTSPNAHYSPTSPSFQRSPAQASPTSPGPYSPTSPSFSPRSPGRNNRSGGQDSYSPTSP 1754
Score = 54.7 bits (130), Expect = 3e-06
Identities = 42/95 (44%), Positives = 54/95 (56%), Gaps = 22/95 (23%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSP---TSPSY--------SPTSPS--YSPSSPTY-------SPSSPY 369
P+SP YSP SP++SP TSP Y SPTSP+ YSP+SP++ SP+SP
Sbjct: 1664 PTSPLYSPASPSFSPGGATSPMYYVGSPQHASPTSPNAHYSPTSPSFQRSPAQASPTSPG 1723
Query: 368 N-SGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTS 267
S SP +SP SP + +G Q YSP+S S
Sbjct: 1724 PYSPTSPSFSPRSPGRNNRSG---GQDSYSPTSPS 1755
[225][TOP]
>UniRef100_C6ZIW1 RNA polymerase II (Fragment) n=1 Tax=Plasmodium ovale
RepID=C6ZIW1_9APIC
Length = 168
Score = 67.0 bits (162), Expect = 6e-10
Identities = 38/69 (55%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSGVSPDYSPSSPQFSP-STGYSP 300
Y+ SP YS TSP YSPTSP YSP+SP +PSSP++ SP YS +SP+FSP S YS
Sbjct: 43 YNVMSPVYSVTSPKYSPTSPQYSPTSPVPNNPSSPHSPHYSP-YSITSPKFSPTSPAYSI 101
Query: 299 SQPGYSPSS 273
S P Y ++
Sbjct: 102 SSPVYDKNA 110
Score = 63.9 bits (154), Expect = 5e-09
Identities = 39/83 (46%), Positives = 46/83 (55%), Gaps = 16/83 (19%)
Frame = -3
Query: 473 YSPTSPN------------YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 330
YSPTSP Y+ SP YS TSP YSP+SP YSP+SP + S SP SP
Sbjct: 24 YSPTSPKNHITGDVHTNMKYNVMSPVYSVTSPKYSPTSPQYSPTSPVPNNPS---SPHSP 80
Query: 329 QFSP----STGYSPSQPGYSPSS 273
+SP S +SP+ P YS SS
Sbjct: 81 HYSPYSITSPKFSPTSPAYSISS 103
Score = 61.6 bits (148), Expect = 3e-08
Identities = 41/89 (46%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSP----SYSPSSPTYSP---SSPYNSGVSPDYSPSSPQF 324
S YS TSP YSPTSP YSPTSP SP SP YSP +SP S SP YS SSP +
Sbjct: 47 SPVYSVTSPKYSPTSPQYSPTSPVPNNPSSPHSPHYSPYSITSPKFSPTSPAYSISSPVY 106
Query: 323 SPSTGYS--PSQPGYSPSSTSQYTPQTND 243
+ + P P Y S Q D
Sbjct: 107 DKNAPINKHPLSPAYILQSPVQVKQHIQD 135
Score = 57.8 bits (138), Expect = 4e-07
Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 4/56 (7%)
Frame = -3
Query: 485 PSSPYSPTSPNYSP---TSPSYSPTSPSYSPSSPTYSPSSPYNS-GVSPDYSPSSP 330
P++P SP SP+YSP TSP +SPTSP+YS SSP Y ++P N +SP Y SP
Sbjct: 71 PNNPSSPHSPHYSPYSITSPKFSPTSPAYSISSPVYDKNAPINKHPLSPAYILQSP 126
[226][TOP]
>UniRef100_UPI00005878B7 PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus
purpuratus RepID=UPI00005878B7
Length = 374
Score = 66.6 bits (161), Expect = 8e-10
Identities = 28/76 (36%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPS 297
Y+ T+P+Y+ ++PSY+ ++PSY+ S P+Y+ S PY + + Y+ S+P ++ ST Y+ +
Sbjct: 148 YTSTTPSYTASTPSYATSTPSYATSRPSYATSRPYFTSTTSSYTASTPSYTESTASYTTT 207
Query: 296 QPGYSPSSTSQYTPQT 249
QP +P +T +P+T
Sbjct: 208 QPSAAPPTTMTSSPRT 223
Score = 64.3 bits (155), Expect = 4e-09
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPS 297
Y+ + P+Y+ + PSY+ ++PSY S+P Y ++PY + +P Y+ S+P ++ ST Y+ S
Sbjct: 113 YTESRPSYATSRPSYTTSTPSYPTSTPYYRTTTPYYTSTTPSYTASTPSYATSTPSYATS 172
Query: 296 QPGYS------PSSTSQYTPQTNDQDE 234
+P Y+ S+TS YT T E
Sbjct: 173 RPSYATSRPYFTSTTSSYTASTPSYTE 199
Score = 63.5 bits (153), Expect = 7e-09
Identities = 33/78 (42%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Frame = -3
Query: 476 PYSPTS-PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYS 303
PY TS P Y+ ++PSY ++P Y+ S+P+Y S+PY + P Y+ S+P ++ ST Y+
Sbjct: 20 PYYTTSRPPYTTSTPSYPTSTPYYTTSTPSYPTSTPYYTTSRPPYTTSTPSYTASTPSYT 79
Query: 302 PSQPGYSPSSTSQYTPQT 249
S+P Y P+ST YT T
Sbjct: 80 ESRPSY-PTSTPYYTTST 96
Score = 62.4 bits (150), Expect = 2e-08
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Frame = -3
Query: 482 SSPYSPTS-PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 309
S+P PTS P Y T+P Y+ T+PSY+ S+P+Y+ S+P + P Y+ S P F+ +T
Sbjct: 130 STPSYPTSTPYYRTTTPYYTSTTPSYTASTPSYATSTPSYATSRPSYATSRPYFTSTTSS 189
Query: 308 YSPSQPGYSPSSTSQYTPQ 252
Y+ S P Y+ S+ S T Q
Sbjct: 190 YTASTPSYTESTASYTTTQ 208
Score = 60.8 bits (146), Expect = 4e-08
Identities = 27/74 (36%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = -3
Query: 476 PYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSP 300
PY+ ++P+Y+ ++PSY+ + PSY S+P Y+ S+PY + + Y+ S+P ++ S Y+
Sbjct: 63 PYTTSTPSYTASTPSYTESRPSYPTSTPYYTTSTPYYTLTTSSYTASTPSYTESRPSYAT 122
Query: 299 SQPGYSPSSTSQYT 258
S+P Y+ S+ S T
Sbjct: 123 SRPSYTTSTPSYPT 136
Score = 59.7 bits (143), Expect = 1e-07
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = -3
Query: 482 SSPYSPTS-PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S+P PTS P Y+ ++PSY ++P Y+ S P Y+ S+P + +P Y+ S P + ST Y
Sbjct: 32 STPSYPTSTPYYTTSTPSYPTSTPYYTTSRPPYTTSTPSYTASTPSYTESRPSYPTSTPY 91
Query: 305 SPSQPGYSPSSTSQYTPQTNDQDE 234
+ Y +TS YT T E
Sbjct: 92 YTTSTPYYTLTTSSYTASTPSYTE 115
Score = 57.8 bits (138), Expect = 4e-07
Identities = 26/77 (33%), Positives = 46/77 (59%)
Frame = -3
Query: 476 PYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPS 297
PY+ ++P+Y ++P Y+ ++PSY S+P Y+ S P + +P Y+ S+P ++ S P+
Sbjct: 28 PYTTSTPSYPTSTPYYTTSTPSYPTSTPYYTTSRPPYTTSTPSYTASTPSYTESRPSYPT 87
Query: 296 QPGYSPSSTSQYTPQTN 246
Y +ST YT T+
Sbjct: 88 STPYYTTSTPYYTLTTS 104
Score = 56.6 bits (135), Expect = 8e-07
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = -3
Query: 482 SSPYSPTS-PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
S P PTS P Y+ ++P Y+ T+ SY+ S+P+Y+ S P + P Y+ S+P + ST Y
Sbjct: 81 SRPSYPTSTPYYTTSTPYYTLTTSSYTASTPSYTESRPSYATSRPSYTTSTPSYPTSTPY 140
Query: 305 SPSQPGYSPSSTSQYTPQT 249
+ Y S+T YT T
Sbjct: 141 YRTTTPYYTSTTPSYTAST 159
Score = 54.3 bits (129), Expect = 4e-06
Identities = 24/75 (32%), Positives = 43/75 (57%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQ 294
Y+ ++P+Y ++P Y T+P Y+ ++P+Y+ S+P + +P Y+ S P ++ S Y S
Sbjct: 127 YTTSTPSYPTSTPYYRTTTPYYTSTTPSYTASTPSYATSTPSYATSRPSYATSRPYFTST 186
Query: 293 PGYSPSSTSQYTPQT 249
+ST YT T
Sbjct: 187 TSSYTASTPSYTEST 201
[227][TOP]
>UniRef100_B9G524 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9G524_ORYSJ
Length = 536
Score = 66.6 bits (161), Expect = 8e-10
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
PS P P+ P+Y P+ PSY P+ P Y+P P Y+P P P+YSP P + PS
Sbjct: 330 PSPPDIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPP 389
Query: 311 GYSPSQPGYSPSSTSQYTPQ 252
Y+P P Y P S +Y P+
Sbjct: 390 QYAPQPPSYVP-SPPEYAPE 408
Score = 65.9 bits (159), Expect = 1e-09
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
PS P Y+P P Y+P P P+ P YSP P+Y PS P + P Y PS P+++P
Sbjct: 351 PSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPEYAPEPP 410
Query: 308 -YSPSQPGYSPSSTSQYTPQ 252
Y+P PG +P S +Y P+
Sbjct: 411 VYAPYPPGITP-SPPEYAPE 429
Score = 61.6 bits (148), Expect = 3e-08
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
PS P YSP P+Y P+ P Y+P PSY PS P Y+P P + P +PS P+++P
Sbjct: 372 PSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPEYAPEPPVYAPYPPGITPSPPEYAPEP- 430
Query: 308 YSPSQPG 288
P PG
Sbjct: 431 -PPGPPG 436
Score = 58.9 bits (141), Expect = 2e-07
Identities = 35/82 (42%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSP--TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 315
PS P +P+ P +P + P P+ PSY PS P+Y PS P + P Y+P P PS
Sbjct: 314 PSPPEVTPSPPEITPYPSPPDIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPS 373
Query: 314 -TGYSPSQPGYSPSSTSQYTPQ 252
YSP P Y P S QY PQ
Sbjct: 374 PPEYSPEPPSYVP-SPPQYAPQ 394
Score = 53.9 bits (128), Expect = 5e-06
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
P P Y P+ P Y+P PSY P+ P Y+P P Y+P P + P+Y+P P P
Sbjct: 379 PEPPSYVPSPPQYAPQPPSYVPSPPEYAPEPPVYAPYPPGITPSPPEYAPEPPPGPPGRW 438
Query: 308 YSPSQPGYSPSS 273
+ G P++
Sbjct: 439 WRVPAAGGVPAA 450
[228][TOP]
>UniRef100_Q7XRB2 OSJNBa0006B20.10 protein n=3 Tax=Oryza sativa RepID=Q7XRB2_ORYSJ
Length = 335
Score = 66.6 bits (161), Expect = 8e-10
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ---FSPST 312
S YSP SP SP Y+P SPS +SP Y+P SP SPDY+P+SP + S
Sbjct: 117 SPDYSPESPPRRAASPDYTPASPSRRAASPDYTPESPPRRAASPDYTPASPSRRAAASSP 176
Query: 311 GYSPSQPGYSPSSTSQYTPQT 249
Y+P P +++ Y+P T
Sbjct: 177 DYTPESPPRRRAASPDYSPST 197
Score = 64.7 bits (156), Expect = 3e-09
Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS-PQFSPSTGY 306
S Y+P SP SP YSP SP +SP Y+P SP SPDYSP S P+ + S Y
Sbjct: 75 SPDYTPESPPRRAASPDYSPASPPRRAASPDYTPESPPRRAASPDYSPESPPRRAASPDY 134
Query: 305 SPSQPGYSPSSTSQYTPQT 249
+P+ P +S YTP++
Sbjct: 135 TPASPSRRAAS-PDYTPES 152
Score = 64.7 bits (156), Expect = 3e-09
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 15/93 (16%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP--------- 330
S YSP++P SP YSP++P +SP YSPS+P SPDY+P SP
Sbjct: 190 SPDYSPSTPPRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYTPMSPPRRAASPDY 249
Query: 329 -QFSP-----STGYSPSQPGYSPSSTSQYTPQT 249
Q +P S Y+PS P +++ YTP T
Sbjct: 250 TQMTPPRRAASPDYTPSTPPPPRAASPDYTPST 282
Score = 64.3 bits (155), Expect = 4e-09
Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 16/94 (17%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP-QFSPSTGY 306
S YSP SP SP Y+P SP +SP YSP SP SPDY+P+SP + + S Y
Sbjct: 89 SPDYSPASPPRRAASPDYTPESPPRRAASPDYSPESPPRRAASPDYTPASPSRRAASPDY 148
Query: 305 SP-------SQPGYSPSSTSQ--------YTPQT 249
+P + P Y+P+S S+ YTP++
Sbjct: 149 TPESPPRRAASPDYTPASPSRRAAASSPDYTPES 182
Score = 60.1 bits (144), Expect = 8e-08
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 12/90 (13%)
Frame = -3
Query: 485 PSSPYSPTSPNYSP--------TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS- 333
PS + +SP+Y+P SP YSP++P +SP YSPS+P SPDYSPS+
Sbjct: 167 PSRRAAASSPDYTPESPPRRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYSPSTP 226
Query: 332 PQFSPSTGYSPSQP---GYSPSSTSQYTPQ 252
P+ + S Y+P P SP T P+
Sbjct: 227 PRRAASPDYTPMSPPRRAASPDYTQMTPPR 256
Score = 59.3 bits (142), Expect = 1e-07
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 17/95 (17%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSY--SPSSPTYSPSSP-YNSGVSPDYSPS-------S 333
S Y+P SP SP Y+P SPS + SSP Y+P SP SPDYSPS S
Sbjct: 145 SPDYTPESPPRRAASPDYTPASPSRRAAASSPDYTPESPPRRRAASPDYSPSTPPRRAAS 204
Query: 332 PQFSPST-GYSPSQPGYSPS------STSQYTPQT 249
P +SPST + P YSPS ++ YTP +
Sbjct: 205 PDYSPSTPPRRAASPDYSPSTPPRRAASPDYTPMS 239
Score = 58.5 bits (140), Expect = 2e-07
Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 24/102 (23%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSP-------SSPTYSPSSPYN--SGVSPDYSPSSP 330
S P SP+Y+P SPS SP Y+P +SP Y+P+SP + SPDY+P SP
Sbjct: 124 SPPRRAASPDYTPASPSRRAASPDYTPESPPRRAASPDYTPASPSRRAAASSPDYTPESP 183
Query: 329 --QFSPSTGYSPS-------QPGYSPS------STSQYTPQT 249
+ + S YSPS P YSPS ++ Y+P T
Sbjct: 184 PRRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYSPST 225
Score = 55.5 bits (132), Expect = 2e-06
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS--------SPQ 327
S YSP++P SP Y+P SP +SP Y+ +P SPDY+PS SP
Sbjct: 218 SPDYSPSTPPRRAASPDYTPMSPPRRAASPDYTQMTPPRRAASPDYTPSTPPPPRAASPD 277
Query: 326 FSPSTGYSPSQPGYSPSSTSQYT 258
++PST PS P PS+ +T
Sbjct: 278 YTPST--PPSSP--LPSAAESFT 296
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/90 (38%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS-PQFSPSTGY 306
SS P SP+Y+P SP P +SP Y+P SP SPDYSP+S P+ + S Y
Sbjct: 53 SSCCPPPSPDYTPASP------PHRRAASPDYTPESPPRRAASPDYSPASPPRRAASPDY 106
Query: 305 SP-------SQPGYSPSS------TSQYTP 255
+P + P YSP S + YTP
Sbjct: 107 TPESPPRRAASPDYSPESPPRRAASPDYTP 136
[229][TOP]
>UniRef100_C6F091 RNA polymerase II (Fragment) n=1 Tax=Plasmodium berghei
RepID=C6F091_PLABE
Length = 161
Score = 66.2 bits (160), Expect = 1e-09
Identities = 41/80 (51%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGVSPDYSPSSPQFSPS 315
S YS TSP YSPTSP YSP+SP +PSSP YSP +SP S SP YS SSP + +
Sbjct: 39 SPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKN 98
Query: 314 ---TGYSPSQPGYSPSSTSQ 264
TG +P P Y S Q
Sbjct: 99 ENMTGKNPLSPAYMLQSRVQ 118
Score = 64.3 bits (155), Expect = 4e-09
Identities = 45/95 (47%), Positives = 49/95 (51%), Gaps = 32/95 (33%)
Frame = -3
Query: 473 YSPTSPN--------YSPTSPS-------------------YSPTSPSYSPSSPTYSPSS 375
YSPTSP YSPTSP YS TSP YSP+SP YSPSS
Sbjct: 1 YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSS 60
Query: 374 PY-NSGVSPDYSP---SSPQFSP-STGYSPSQPGY 285
P N+ SP YSP +SP+FSP S YS S P Y
Sbjct: 61 PVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 95
[230][TOP]
>UniRef100_A0E2M3 Chromosome undetermined scaffold_75, whole genome shotgun sequence
n=1 Tax=Paramecium tetraurelia RepID=A0E2M3_PARTE
Length = 288
Score = 66.2 bits (160), Expect = 1e-09
Identities = 34/88 (38%), Positives = 35/88 (39%), Gaps = 10/88 (11%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPT----------SPSYSPSSPTYSPSSPYNSGVSPDYSPS 336
P PY P P Y PT P Y P P Y P P Y P P P Y P
Sbjct: 156 PQQPYPPQQPGY-PTQPGYPPQPGYPAQPYPQQPGYPPQQPGYPPQQPGYPPQQPGYPPQ 214
Query: 335 SPQFSPSTGYSPSQPGYSPSSTSQYTPQ 252
P + P GY P QPGY P Y PQ
Sbjct: 215 QPGYPPQPGYPPQQPGYPPQQPG-YPPQ 241
Score = 61.2 bits (147), Expect = 3e-08
Identities = 33/80 (41%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P P Y P P Y P P Y P P Y P P Y P P P Y P P + P
Sbjct: 192 PQQPGYPPQQPGYPPQQPGYPPQQPGYPPQ-PGYPPQQPGYPPQQPGYPPQQPGYPPQQP 250
Query: 311 GYSPSQPGYSPSSTSQYTPQ 252
GY P QPGY QY PQ
Sbjct: 251 GYPPQQPGY---PAQQYPPQ 267
Score = 55.5 bits (132), Expect = 2e-06
Identities = 27/67 (40%), Positives = 29/67 (43%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P P P P Y P P Y P P Y P P Y P P P Y + Q+ P GY
Sbjct: 213 PQQPGYPPQPGYPPQQPGYPPQQPGYPPQQPGYPPQQPGYPPQQPGY--PAQQYPPQQGY 270
Query: 305 SPSQPGY 285
P QPGY
Sbjct: 271 -PPQPGY 276
[231][TOP]
>UniRef100_Q1WKU0 Putative RNA polymerase II 215 kD subunit (Fragment) n=2
Tax=melanogaster subgroup RepID=Q1WKU0_DROYA
Length = 766
Score = 65.9 bits (159), Expect = 1e-09
Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG-Y 306
SSP SP P+ SP P+ SPSYSP+SP Y+ SSP G SP+YSPSSP +SP++ Y
Sbjct: 698 SSPSSP-GPSMSPYFPASPSVSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLY 754
Query: 305 SPSQPGYSPSS 273
+ + P Y+ ++
Sbjct: 755 ASASPRYASTT 765
Score = 65.1 bits (157), Expect = 2e-09
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 16/85 (18%)
Frame = -3
Query: 479 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 330
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 667 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSP 726
Query: 329 QFSPST------GYSPSQPGYSPSS 273
++ S+ YSPS P YSP+S
Sbjct: 727 NYTASSPGGASPNYSPSSPNYSPTS 751
[232][TOP]
>UniRef100_UPI0000DD9478 Os08g0268000 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000DD9478
Length = 270
Score = 65.5 bits (158), Expect = 2e-09
Identities = 45/137 (32%), Positives = 65/137 (47%), Gaps = 35/137 (25%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPT---------YSPSSPYNSGVSPDYSPSS 333
P+ P SP+Y+P++P SP Y+PS+PT Y+PS+P SPDY+PS+
Sbjct: 108 PTPPRRAASPDYTPSTPPPRAASPDYTPSTPTPPRRAASPNYTPSTPQRHAASPDYTPST 167
Query: 332 P---------QFSPST--------GYSP-------SQPGYSPSSTSQYTPQTNDQDERGQ 225
P ++PST Y+P + P YSP ST +P +D +
Sbjct: 168 PTPPRRAASLDYTPSTPPPRAASPDYTPLSPPPRAASPEYSP-STPPPSPVPSDAESGTS 226
Query: 224 D*WRRSMR--PFEARRS 180
WRR R P++ R S
Sbjct: 227 PLWRRRRRHHPYQRRGS 243
Score = 60.1 bits (144), Expect = 8e-08
Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 27/104 (25%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPT---------YSPSSPY--NSGVSPDYSPS- 336
SP SP+Y+P++P SP Y+PS+PT Y+PS+P SPDY+PS
Sbjct: 64 SPRRAASPDYTPSTPPRRAASPDYTPSTPTTPRRAASPDYTPSTPTPPRRAASPDYTPST 123
Query: 335 ------SPQFSPSTGYSP---SQPGYSPS------STSQYTPQT 249
SP ++PST P + P Y+PS ++ YTP T
Sbjct: 124 PPPRAASPDYTPSTPTPPRRAASPNYTPSTPQRHAASPDYTPST 167
Score = 57.4 bits (137), Expect = 5e-07
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 13/92 (14%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPT---------SPSYSPTSPSYSPSSPTYSPSSPY--NSGVSPDYSP 339
P++P SP+Y+P+ SP Y+P++P +SP Y+PS+P SP+Y+P
Sbjct: 92 PTTPRRAASPDYTPSTPTPPRRAASPDYTPSTPPPRAASPDYTPSTPTPPRRAASPNYTP 151
Query: 338 SSPQ-FSPSTGYSPSQPGYSPSSTS-QYTPQT 249
S+PQ + S Y+PS P + S YTP T
Sbjct: 152 STPQRHAASPDYTPSTPTPPRRAASLDYTPST 183
[233][TOP]
>UniRef100_UPI0000D9F0D9 PREDICTED: similar to zinc finger protein 239 (predicted) n=1
Tax=Macaca mulatta RepID=UPI0000D9F0D9
Length = 650
Score = 65.5 bits (158), Expect = 2e-09
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P SP + P SP + P SP + SP P SP ++P SP + SP++ SP++ P S
Sbjct: 184 PQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSP 243
Query: 311 GYSPSQPGYSPSSTSQYTPQ 252
GY P P Y S +S+Y Q
Sbjct: 244 GYEPRSPSYE-SESSRYESQ 262
Score = 58.9 bits (141), Expect = 2e-07
Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Frame = -3
Query: 467 PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF--------SPST 312
P SP + P SP + P SP + P SP + SP SP+++P SP+ S S
Sbjct: 177 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 236
Query: 311 GYSPSQPGYSPSSTS 267
Y P PGY P S S
Sbjct: 237 RYEPQSPGYEPRSPS 251
Score = 56.6 bits (135), Expect = 8e-07
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = -3
Query: 446 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTS 267
P SP + P SP + P SP + P SP SP P SP+F+P + S SQ S +
Sbjct: 177 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 236
Query: 266 QYTPQTNDQDER 231
+Y PQ+ + R
Sbjct: 237 RYEPQSPGYEPR 248
[234][TOP]
>UniRef100_Q4Y307 Putative uncharacterized protein n=1 Tax=Plasmodium chabaudi
RepID=Q4Y307_PLACH
Length = 133
Score = 65.5 bits (158), Expect = 2e-09
Identities = 41/80 (51%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGVSPDYSPSSPQFSPS 315
S YS TSP YSPTSP YSP+SP +PSSP YSP +SP S SP YS SSP + S
Sbjct: 11 SXVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKS 70
Query: 314 ---TGYSPSQPGYSPSSTSQ 264
G +P P Y S Q
Sbjct: 71 ENMAGKNPLSPAYMLQSRVQ 90
Score = 61.6 bits (148), Expect = 3e-08
Identities = 37/67 (55%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 297
Y+ S YS TSP YSPTSP YSPSSP P++P + SP YS +SP+FSP S YS S
Sbjct: 7 YNIMSXVYSVTSPKYSPTSPQYSPSSPV--PNNPSSPQYSP-YSITSPKFSPTSPAYSIS 63
Query: 296 QPGYSPS 276
P Y S
Sbjct: 64 SPVYDKS 70
[235][TOP]
>UniRef100_C6F098 RNA polymerase II (Fragment) n=2 Tax=Plasmodium vinckei
RepID=C6F098_PLAVN
Length = 161
Score = 65.5 bits (158), Expect = 2e-09
Identities = 46/98 (46%), Positives = 50/98 (51%), Gaps = 32/98 (32%)
Frame = -3
Query: 473 YSPTSPN--------YSPTSPS-------------------YSPTSPSYSPSSPTYSPSS 375
YSPTSP YSPTSP YS TSP YSP+SP YSPSS
Sbjct: 1 YSPTSPTYNANNNAYYSPTSPKNQAGDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSS 60
Query: 374 PY-NSGVSPDYSP---SSPQFSP-STGYSPSQPGYSPS 276
P N+ SP YSP +SP+FSP S YS S P Y S
Sbjct: 61 PVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKS 98
Score = 65.5 bits (158), Expect = 2e-09
Identities = 41/80 (51%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGVSPDYSPSSPQFSPS 315
S YS TSP YSPTSP YSP+SP +PSSP YSP +SP S SP YS SSP + S
Sbjct: 39 SPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKS 98
Query: 314 ---TGYSPSQPGYSPSSTSQ 264
G +P P Y S Q
Sbjct: 99 ENMAGKNPLSPAYMLQSRVQ 118
[236][TOP]
>UniRef100_P13983 Extensin n=1 Tax=Nicotiana tabacum RepID=EXTN_TOBAC
Length = 620
Score = 65.5 bits (158), Expect = 2e-09
Identities = 38/84 (45%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPT---SPSYSPSSPTYSPS--SPYNSGVSPDYSPSSPQFS 321
PS P P YSP P+Y+ + SP+YSP PTYSP SP S P YSPS P +
Sbjct: 254 PSPRRQPQPPTYSPPPPAYAQSPQPSPTYSPPPPTYSPPPPSPIYSPPPPAYSPSPPP-T 312
Query: 320 PSTGYSPSQPGYSPSSTSQYTPQT 249
P+ +SP P YSP T P T
Sbjct: 313 PTPTFSPPPPAYSPPPTYSPPPPT 336
Score = 65.1 bits (157), Expect = 2e-09
Identities = 38/81 (46%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Frame = -3
Query: 485 PSSPYSPT-SPNYSPTSPSYSPTSPS--YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 315
P+ SP SP YSP P+YSP PS YSP P YSPS P +P +SP P +SP
Sbjct: 270 PAYAQSPQPSPTYSPPPPTYSPPPPSPIYSPPPPAYSPSPPPTP--TPTFSPPPPAYSPP 327
Query: 314 TGYSPSQPGYSPSSTSQ-YTP 255
YSP P Y P +S Y+P
Sbjct: 328 PTYSPPPPTYLPLPSSPIYSP 348
Score = 62.4 bits (150), Expect = 2e-08
Identities = 38/91 (41%), Positives = 44/91 (48%), Gaps = 16/91 (17%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYS---PSSPTYSPSSP-YNSGVSPDYSPSSPQFS--- 321
SP P P YSP P+YSP P+Y+ P PTYSP P Y+ P YSP P +S
Sbjct: 400 SPPLPAPPTYSPPPPTYSPPPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPP 459
Query: 320 --------PSTGYSPSQPGYSPSSTSQ-YTP 255
P YSP P YSP S Y+P
Sbjct: 460 PAYAQPPPPPPTYSPPPPAYSPPPPSPIYSP 490
Score = 61.6 bits (148), Expect = 3e-08
Identities = 36/94 (38%), Positives = 39/94 (41%), Gaps = 17/94 (18%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVS------PDYSPSSPQF 324
P YSP P Y P P SP PS+SP PTY S P S P YSP P +
Sbjct: 357 PPPSYSPPPPTYLPPPPPSSPPPPSFSPPPPTYEQSPPPPPAYSPPLPAPPTYSPPPPTY 416
Query: 323 SP-----------STGYSPSQPGYSPSSTSQYTP 255
SP YSP P YSP Y+P
Sbjct: 417 SPPPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSP 450
Score = 58.9 bits (141), Expect = 2e-07
Identities = 36/78 (46%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPT-----SPSYSPTSPSYSPSSPTYSPSSPYNSGV--SPDYSPSSPQ 327
PS YSP P YSP+ +P++SP P+YSP PTYSP P + SP YSP P
Sbjct: 294 PSPIYSPPPPAYSPSPPPTPTPTFSPPPPAYSPP-PTYSPPPPTYLPLPSSPIYSPPPPV 352
Query: 326 FS--PSTGYSPSQPGYSP 279
+S P YSP P Y P
Sbjct: 353 YSPPPPPSYSPPPPTYLP 370
Score = 57.8 bits (138), Expect = 4e-07
Identities = 38/86 (44%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYS---PSSPQFS 321
PSSP YSP P YSP P SYSP P+Y P P SP P S P Y P P +S
Sbjct: 341 PSSPIYSPPPPVYSPPPPPSYSPPPPTYLPPPPPSSPPPPSFSPPPPTYEQSPPPPPAYS 400
Query: 320 P----STGYSPSQPGYSPSSTSQYTP 255
P YSP P YSP + P
Sbjct: 401 PPLPAPPTYSPPPPTYSPPPPTYAQP 426
Score = 57.4 bits (137), Expect = 5e-07
Identities = 36/96 (37%), Positives = 43/96 (44%), Gaps = 19/96 (19%)
Frame = -3
Query: 485 PSSP----YSPTSPNYS-------------PTSPSYSPTSPSYSPSSPTYSPSSPYNSGV 357
PSSP +SP P Y P P+YSP P+YSP PTY+ P +
Sbjct: 374 PSSPPPPSFSPPPPTYEQSPPPPPAYSPPLPAPPTYSPPPPTYSPPPPTYAQPPP----L 429
Query: 356 SPDYSPSSPQFS--PSTGYSPSQPGYSPSSTSQYTP 255
P YSP P +S P YSP P YSP + P
Sbjct: 430 PPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQP 465
Score = 55.1 bits (131), Expect = 2e-06
Identities = 33/83 (39%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP---YNSGVSPDYSPSSPQFSP- 318
P+ ++P P + P+ + P SP P PTYSP P + SP YSP P +SP
Sbjct: 235 PTHRHAP--PTHQPSPLRHLPPSPRRQPQPPTYSPPPPAYAQSPQPSPTYSPPPPTYSPP 292
Query: 317 --STGYSPSQPGYSPSSTSQYTP 255
S YSP P YSPS TP
Sbjct: 293 PPSPIYSPPPPAYSPSPPPTPTP 315
Score = 55.1 bits (131), Expect = 2e-06
Identities = 32/70 (45%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Frame = -3
Query: 467 PTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYNS---GVSPDYSPSSPQFS---PSTG 309
P P YSP P+YSP P +YSP PTYSP P + P YSP P +S PS
Sbjct: 428 PLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYSPPPPSPI 487
Query: 308 YSPSQPGYSP 279
YSP P P
Sbjct: 488 YSPPPPQVQP 497
Score = 54.3 bits (129), Expect = 4e-06
Identities = 36/83 (43%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSY--SPTSPSYSPSSPTYSPSSPYN-SGVSPDYSPSSPQFS-P 318
P YSP P YSP P+Y P+SP YSP P YSP P + S P Y P P S P
Sbjct: 320 PPPAYSPP-PTYSPPPPTYLPLPSSPIYSPPPPVYSPPPPPSYSPPPPTYLPPPPPSSPP 378
Query: 317 STGYSPSQPGY--SPSSTSQYTP 255
+SP P Y SP Y+P
Sbjct: 379 PPSFSPPPPTYEQSPPPPPAYSP 401
Score = 53.1 bits (126), Expect = 9e-06
Identities = 33/93 (35%), Positives = 42/93 (45%), Gaps = 19/93 (20%)
Frame = -3
Query: 485 PSSPYSPTSPNYS---PTSPSYSPTSPSYSPS--SPTYSPSSPYNSGVSPDYSPSSPQF- 324
P YSP P Y+ P P+YSP P+YSP SP YSP P + P +SP P+
Sbjct: 451 PPPTYSPPPPAYAQPPPPPPTYSPPPPAYSPPPPSPIYSPPPPQVQPLPPTFSPPPPRRI 510
Query: 323 -------------SPSTGYSPSQPGYSPSSTSQ 264
+P+ G PS P +SP Q
Sbjct: 511 HLPPPPHRQPRPPTPTYGQPPSPPTFSPPPPRQ 543
[237][TOP]
>UniRef100_B8BEN2 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8BEN2_ORYSI
Length = 519
Score = 65.1 bits (157), Expect = 2e-09
Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYS 303
+PY P+ P P+ PSY P+ PSY PS P Y+P P + P PS P++SP Y
Sbjct: 290 TPY-PSPPEIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYV 348
Query: 302 PSQPGYSPSSTSQYTP 255
PS P Y+P S Y P
Sbjct: 349 PSPPQYAPQPPS-YVP 363
Score = 65.1 bits (157), Expect = 2e-09
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
PS P P+ P+Y P+ PSY P+ P Y+P P Y+P P P+YSP P + PS
Sbjct: 293 PSPPEIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPP 352
Query: 311 GYSPSQPGYSPS 276
Y+P P Y PS
Sbjct: 353 QYAPQPPSYVPS 364
Score = 63.9 bits (154), Expect = 5e-09
Identities = 33/80 (41%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
PS P Y P+ P Y+P P Y+P P PS P YSP P P Y+P P + PS
Sbjct: 307 PSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPP 366
Query: 308 -YSPSQPGYSPSSTSQYTPQ 252
Y+P PG +P S +Y P+
Sbjct: 367 VYAPYPPGITP-SPPEYAPE 385
Score = 58.9 bits (141), Expect = 2e-07
Identities = 35/82 (42%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSP--TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 315
PS P +P+ P +P + P P+ PSY PS P+Y PS P + P Y+P P PS
Sbjct: 277 PSPPEVTPSPPEITPYPSPPEIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPS 336
Query: 314 -TGYSPSQPGYSPSSTSQYTPQ 252
YSP P Y P S QY PQ
Sbjct: 337 PPEYSPEPPSYVP-SPPQYAPQ 357
Score = 58.2 bits (139), Expect = 3e-07
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
PS P YSP P+Y P+ P Y+P PSY PS P Y+P P + P+Y+P P P G
Sbjct: 335 PSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPVYAPYPPGITPSPPEYAPEPPPGPPGGG 394
Score = 57.8 bits (138), Expect = 4e-07
Identities = 31/79 (39%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 312
P P Y+P P P+ P YSP PSY PS P Y+P P P Y+P P +PS
Sbjct: 321 PEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPVYAPYPPGITPSPP 380
Query: 311 GYSPSQPGYSPSSTSQYTP 255
Y+P P P Y P
Sbjct: 381 EYAPEPPPGPPGGGGGYLP 399
[238][TOP]
>UniRef100_Q7RJS0 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii
RepID=Q7RJS0_PLAYO
Length = 2312
Score = 65.1 bits (157), Expect = 2e-09
Identities = 46/98 (46%), Positives = 50/98 (51%), Gaps = 32/98 (32%)
Frame = -3
Query: 482 SSPYSPTSPN--------YSPTSPS-------------------YSPTSPSYSPSSPTYS 384
S YSPTSP YSPTSP YS TSP YSP+SP YS
Sbjct: 2149 SPSYSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYS 2208
Query: 383 PSSPY-NSGVSPDYSP---SSPQFSP-STGYSPSQPGY 285
PSSP N+ SP YSP +SP+FSP S YS S P Y
Sbjct: 2209 PSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 2246
Score = 64.3 bits (155), Expect = 4e-09
Identities = 40/80 (50%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGVSPDYSPSSPQFSPS 315
S YS TSP YSPTSP YSP+SP +PSSP YSP +SP S SP YS SSP + +
Sbjct: 2190 SPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKN 2249
Query: 314 ---TGYSPSQPGYSPSSTSQ 264
G +P P Y S Q
Sbjct: 2250 ENMAGKNPLSPAYMLQSRVQ 2269
Score = 60.8 bits (146), Expect = 4e-08
Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 15/78 (19%)
Frame = -3
Query: 461 SPNYSPTSPSYSPTSPS-YSPSSP------------TYSPSSPYNSGVSPDYSPSSPQFS 321
SP+YSPTSP+Y+ + + YSP+SP Y+ SP S SP YSP+SPQ+S
Sbjct: 2149 SPSYSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYS 2208
Query: 320 PSTGY--SPSQPGYSPSS 273
PS+ +PS P YSP S
Sbjct: 2209 PSSPVPNNPSSPQYSPYS 2226
[239][TOP]
>UniRef100_Q1WKU4 Putative RNA polymerase II 215 kD subunit (Fragment) n=1
Tax=Drosophila erecta RepID=Q1WKU4_DROER
Length = 760
Score = 65.1 bits (157), Expect = 2e-09
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 16/85 (18%)
Frame = -3
Query: 479 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 330
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 667 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSP 726
Query: 329 QFSPST------GYSPSQPGYSPSS 273
++ S+ YSPS P YSP+S
Sbjct: 727 NYTASSPGGASPNYSPSSPNYSPTS 751
Score = 63.2 bits (152), Expect = 9e-09
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG-Y 306
SSP SP P+ SP P+ SPSYSP+SP Y+ SSP G SP+YSPSSP +SP++ Y
Sbjct: 698 SSPSSP-GPSMSPYFPASPSVSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLY 754
Query: 305 SPSQP 291
+ + P
Sbjct: 755 ASASP 759
[240][TOP]
>UniRef100_C6F1F7 DNA-directed RNA polymerase n=1 Tax=Plasmodium gallinaceum
RepID=C6F1F7_PLAGA
Length = 2200
Score = 64.7 bits (156), Expect = 3e-09
Identities = 46/106 (43%), Positives = 53/106 (50%), Gaps = 30/106 (28%)
Frame = -3
Query: 482 SSPYSPTSPN-------YSPTSPS------------------YSPTSPSYSPSSPTYSPS 378
S YSPTSP+ YSPTSP YS TSP YSP SP YSP+
Sbjct: 2040 SPSYSPTSPSYNADNVYYSPTSPKNQMDDVKSNIKYNVMSPVYSVTSPKYSPMSPQYSPT 2099
Query: 377 SPY-NSGVSPDYSP---SSPQFSP-STGYSPSQPGYSPSSTSQYTP 255
SP N+ SP YSP +SP+FSP S YS S P Y ++ P
Sbjct: 2100 SPVANNPGSPHYSPYSITSPKFSPTSPAYSISSPVYDKNAVLNNQP 2145
Score = 62.8 bits (151), Expect = 1e-08
Identities = 40/86 (46%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGVSPDYSPSSPQFSPS 315
S YS TSP YSP SP YSPTSP + +P SP YSP +SP S SP YS SSP + +
Sbjct: 2079 SPVYSVTSPKYSPMSPQYSPTSPVANNPGSPHYSPYSITSPKFSPTSPAYSISSPVYDKN 2138
Query: 314 T--GYSPSQPGYSPSSTSQYTPQTND 243
P P Y S Q T D
Sbjct: 2139 AVLNNQPLSPAYIIQSPVQVKQNTQD 2164
[241][TOP]
>UniRef100_C3XUY7 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3XUY7_BRAFL
Length = 1576
Score = 64.7 bits (156), Expect = 3e-09
Identities = 32/78 (41%), Positives = 33/78 (42%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
P PY P P Y P P Y P P Y P P Y P P P Y P P + P GY
Sbjct: 1477 PDQPYPPDQP-YPPPQPGYPPQQPGYPPQ-PGYPPQQPGYPPQQPGYPPQQPGYPPQPGY 1534
Query: 305 SPSQPGYSPSSTSQYTPQ 252
P QP Y P Y PQ
Sbjct: 1535 PPQQPAYPPQQPG-YPPQ 1551
[242][TOP]
>UniRef100_O09451 DNA-directed RNA polymerase (Fragment) n=1 Tax=Bonnemaisonia hamifera
RepID=O09451_9FLOR
Length = 1732
Score = 64.3 bits (155), Expect = 4e-09
Identities = 48/106 (45%), Positives = 56/106 (52%), Gaps = 29/106 (27%)
Frame = -3
Query: 482 SSPYSPTSP------------NYSPTSPSYSPTSP-SYSPSSP-TYSPSSPYNSGVSP-- 351
S YSP+SP NY SP YSP+SP +YSPSSP +SPSSP G SP
Sbjct: 1628 SRSYSPSSPSYNGRGAASPGANYVAASPGYSPSSPGAYSPSSPAAFSPSSPAAGGYSPST 1687
Query: 350 ----------DYS-PSSPQFSPS--TGYSPSQPGYSPSSTSQYTPQ 252
YS SP++ PS G SPS P YSPSS QY+P+
Sbjct: 1688 PAYTANAAANQYSYARSPRYPPSYANGTSPSSPQYSPSS-PQYSPR 1732
Score = 59.7 bits (143), Expect = 1e-07
Identities = 40/100 (40%), Positives = 49/100 (49%), Gaps = 22/100 (22%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSP---TSPSYSPS---SPTYS--------PSSP--YNSGVSP 351
S ++P SP Y PTSP SP SP+ SP SP S P++P G S
Sbjct: 1570 SGTFAPASPAYRPTSPGPSPYAAQSPAQSPGVQYSPDKSRVQVQRAPPTAPSAAGGGASR 1629
Query: 350 DYSPSSPQF------SPSTGYSPSQPGYSPSSTSQYTPQT 249
YSPSSP + SP Y + PGYSPSS Y+P +
Sbjct: 1630 SYSPSSPSYNGRGAASPGANYVAASPGYSPSSPGAYSPSS 1669
[243][TOP]
>UniRef100_C6F096 RNA polymerase II (Fragment) n=1 Tax=Plasmodium yoelii nigeriensis
RepID=C6F096_9APIC
Length = 161
Score = 64.3 bits (155), Expect = 4e-09
Identities = 45/95 (47%), Positives = 49/95 (51%), Gaps = 32/95 (33%)
Frame = -3
Query: 473 YSPTSPN--------YSPTSPS-------------------YSPTSPSYSPSSPTYSPSS 375
YSPTSP YSPTSP YS TSP YSP+SP YSPSS
Sbjct: 1 YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSS 60
Query: 374 PY-NSGVSPDYSP---SSPQFSP-STGYSPSQPGY 285
P N+ SP YSP +SP+FSP S YS S P Y
Sbjct: 61 PVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 95
Score = 64.3 bits (155), Expect = 4e-09
Identities = 40/80 (50%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGVSPDYSPSSPQFSPS 315
S YS TSP YSPTSP YSP+SP +PSSP YSP +SP S SP YS SSP + +
Sbjct: 39 SPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKT 98
Query: 314 ---TGYSPSQPGYSPSSTSQ 264
G +P P Y S Q
Sbjct: 99 ENMAGKNPLSPAYMLQSRVQ 118
[244][TOP]
>UniRef100_C6F093 RNA polymerase II (Fragment) n=2 Tax=Plasmodium yoelii
RepID=C6F093_PLAYO
Length = 161
Score = 64.3 bits (155), Expect = 4e-09
Identities = 45/95 (47%), Positives = 49/95 (51%), Gaps = 32/95 (33%)
Frame = -3
Query: 473 YSPTSPN--------YSPTSPS-------------------YSPTSPSYSPSSPTYSPSS 375
YSPTSP YSPTSP YS TSP YSP+SP YSPSS
Sbjct: 1 YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSS 60
Query: 374 PY-NSGVSPDYSP---SSPQFSP-STGYSPSQPGY 285
P N+ SP YSP +SP+FSP S YS S P Y
Sbjct: 61 PVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 95
Score = 64.3 bits (155), Expect = 4e-09
Identities = 40/80 (50%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGVSPDYSPSSPQFSPS 315
S YS TSP YSPTSP YSP+SP +PSSP YSP +SP S SP YS SSP + +
Sbjct: 39 SPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKN 98
Query: 314 ---TGYSPSQPGYSPSSTSQ 264
G +P P Y S Q
Sbjct: 99 ENMAGKNPLSPAYMLQSRVQ 118
[245][TOP]
>UniRef100_Q0UCC9 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
RepID=Q0UCC9_PHANO
Length = 351
Score = 64.3 bits (155), Expect = 4e-09
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 18/83 (21%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYS----PTSPSYSPSSPT------YSPSSPYNSGVSPDYSPSS 333
S YSP +P+++P SPSY+ PT+P+Y P++PT YSP+ P SP Y+P S
Sbjct: 138 SPRYSPPTPHFAPRSPSYAPGLPPTTPTYRPTTPTFIDLTYYSPTPPILMPESPTYTPPS 197
Query: 332 PQFSP--------STGYSPSQPG 288
P++ P S GY+P+ PG
Sbjct: 198 PRYYPASFEINLLSPGYAPTSPG 220
Score = 60.8 bits (146), Expect = 4e-08
Identities = 38/90 (42%), Positives = 50/90 (55%), Gaps = 14/90 (15%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSY-SP---------TSPSYSPSSPTYSPSSP-YNSGV---SPDY 345
+S Y+P SP YSP +P SP TSP YSP +P ++P SP Y G+ +P Y
Sbjct: 107 TSTYTPASPRYSPATPKIRSPRLTMLEDGATSPRYSPPTPHFAPRSPSYAPGLPPTTPTY 166
Query: 344 SPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 255
P++P F T YSP+ P P S + YTP
Sbjct: 167 RPTTPTFIDLTYYSPTPPILMPESPT-YTP 195
Score = 58.5 bits (140), Expect = 2e-07
Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 13/90 (14%)
Frame = -3
Query: 485 PSSP-YSPTSPN------YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 327
P++P Y PT+P YSPT P P SP+Y+P SP Y P+S + +SP Y+P+SP
Sbjct: 161 PTTPTYRPTTPTFIDLTYYSPTPPILMPESPTYTPPSPRYYPASFEINLLSPGYAPTSPG 220
Query: 326 FSPSTGYSPSQPGYSPSSTS------QYTP 255
T +PS P P+S+S YTP
Sbjct: 221 IRSPTYGAPS-PDLEPASSSLSLTSPTYTP 249
Score = 58.2 bits (139), Expect = 3e-07
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 18/88 (20%)
Frame = -3
Query: 464 TSPNYSPTSPSYSPTSPSYS----PSSPTYSPSSP------YNSGVSPDYSPSSPQFS-P 318
TSP YSP +P ++P SPSY+ P++PTY P++P Y S P P SP ++ P
Sbjct: 137 TSPRYSPPTPHFAPRSPSYAPGLPPTTPTYRPTTPTFIDLTYYSPTPPILMPESPTYTPP 196
Query: 317 STGYSPS-------QPGYSPSSTSQYTP 255
S Y P+ PGY+P+S +P
Sbjct: 197 SPRYYPASFEINLLSPGYAPTSPGIRSP 224
Score = 56.6 bits (135), Expect = 8e-07
Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 14/84 (16%)
Frame = -3
Query: 482 SSPYSPTSPN-----YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 318
S Y+PTSP Y SP P S S S +SPTY+P+SP+ + S Y +SP F
Sbjct: 211 SPGYAPTSPGIRSPTYGAPSPDLEPASSSLSLTSPTYTPTSPHFTPTSTPYVRTSPSFYR 270
Query: 317 STG---------YSPSQPGYSPSS 273
+G Y P+ P YSP+S
Sbjct: 271 PSGSRSPSFYRPYGPASPTYSPTS 294
Score = 55.5 bits (132), Expect = 2e-06
Identities = 40/105 (38%), Positives = 49/105 (46%), Gaps = 20/105 (19%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSG------------VSP 351
PS P S + S TSP+Y+PTSP ++P+S Y SPS SG SP
Sbjct: 229 PSPDLEPASSSLSLTSPTYTPTSPHFTPTSTPYVRTSPSFYRPSGSRSPSFYRPYGPASP 288
Query: 350 DYSPSSPQFSPSTGYSP-----SQPGYSPSSTSQYTPQTNDQDER 231
YSP+SP S G P P YSP S S+ P Q+ R
Sbjct: 289 TYSPTSPVIPTSIGSPPINFTLGSPTYSPPSPSR-LPSARIQENR 332
Score = 53.9 bits (128), Expect = 5e-06
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Frame = -3
Query: 482 SSPY---SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP----------YNSGVSPDYS 342
S+P+ +P P SP PT+ +Y+P+SP YSP++P + SP YS
Sbjct: 83 SAPFFGVTPVRRYLDPISPGLRPTTSTYTPASPRYSPATPKIRSPRLTMLEDGATSPRYS 142
Query: 341 PSSPQFSPSTGYSPSQPGYSPSSTSQYTPQT 249
P +P F+P SPS P +T Y P T
Sbjct: 143 PPTPHFAPR---SPSYAPGLPPTTPTYRPTT 170
[246][TOP]
>UniRef100_UPI0001796FA8 PREDICTED: zinc finger protein 768 n=1 Tax=Equus caballus
RepID=UPI0001796FA8
Length = 547
Score = 63.9 bits (154), Expect = 5e-09
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 312
P +P + SP + P SP + SP + P SP ++P S + SP++ P SP++ P S
Sbjct: 67 PQNPEFESQSPRFEPESPGFESHSPGFVPPSPEFAPRSSESDSQSPEFEPQSPRYEPQSP 126
Query: 311 GYSPSQPGYSPSSTSQY 261
GY P PGY S +S+Y
Sbjct: 127 GYEPKSPGYE-SQSSRY 142
Score = 55.8 bits (133), Expect = 1e-06
Identities = 35/106 (33%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Frame = -3
Query: 485 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF-SPST 312
P SP + SP + P SP ++P S SP + P SP SP Y P SP + S S+
Sbjct: 81 PESPGFESHSPGFVPPSPEFAPRSSESDSQSPEFEPQSPRYEPQSPGYEPKSPGYESQSS 140
Query: 311 GYSPSQPGYSPSSTSQYTPQTNDQDERGQD*WRRSMRPFEARRSIL 174
Y PGY P + + PQ + + + +S R E IL
Sbjct: 141 RYESKSPGYEPQN-PVFEPQNPEFKTQSPEFEAQSSRFQEGAEMIL 185
Score = 55.1 bits (131), Expect = 2e-06
Identities = 33/100 (33%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 306
PS ++P S SP + P SP Y P SP Y P SP S Y SP GY
Sbjct: 96 PSPEFAPRSSESDSQSPEFEPQSPRYEPQSPGYEPKSPGYESQSSRYESKSP------GY 149
Query: 305 SPSQPGYSPSSTSQYT--PQTNDQDERGQD*WRRSMRPFE 192
P P + P + T P+ Q R Q+ + P E
Sbjct: 150 EPQNPVFEPQNPEFKTQSPEFEAQSSRFQEGAEMILNPEE 189
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = -3
Query: 446 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQ-PGYSPSST 270
P SP + P +P + SP + P SP SP + P SP+F+P + S SQ P + P S
Sbjct: 60 PQSPGFEPQNPEFESQSPRFEPESPGFESHSPGFVPPSPEFAPRSSESDSQSPEFEPQS- 118
Query: 269 SQYTPQT 249
+Y PQ+
Sbjct: 119 PRYEPQS 125
[247][TOP]
>UniRef100_UPI00016E658E UPI00016E658E related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E658E
Length = 1628
Score = 63.9 bits (154), Expect = 5e-09
Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 6/54 (11%)
Frame = -3
Query: 485 PSSPYSPT-----SPNYSPTSPSYSPTSPS-YSPSSPTYSPSSPYNSGVSPDYS 342
P+SPY P+ SPNYSPTSP+Y P SP Y+P SP YSP+SP S SP YS
Sbjct: 1575 PASPYIPSPGGAMSPNYSPTSPAYEPRSPGGYTPQSPGYSPTSPSYSPTSPSYS 1628
Score = 55.8 bits (133), Expect = 1e-06
Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSP- 318
+S S SP YSP ++SPT S P SP P+SPY +SP+YSP+SP + P
Sbjct: 1549 ASDASGFSPGYSP---AWSPTPGS--PGSP--GPASPYIPSPGGAMSPNYSPTSPAYEPR 1601
Query: 317 --------STGYSPSQPGYSPSSTS 267
S GYSP+ P YSP+S S
Sbjct: 1602 SPGGYTPQSPGYSPTSPSYSPTSPS 1626
[248][TOP]
>UniRef100_A9U3I4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9U3I4_PHYPA
Length = 291
Score = 63.9 bits (154), Expect = 5e-09
Identities = 42/80 (52%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYS--PTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 309
S PYSPT SP+SP+YS P SP+ S SSPT +PSSP S SP YSP+ SPST
Sbjct: 158 SPPYSPTPSGSSPSSPTYSSPPYSPTPSSSSPT-TPSSPSYS--SPPYSPTPSDPSPSTP 214
Query: 308 YSP--SQPGYSPSSTSQYTP 255
SP S P YSP+ + P
Sbjct: 215 SSPTYSSPPYSPTPSGPSPP 234
Score = 63.5 bits (153), Expect = 7e-09
Identities = 45/89 (50%), Positives = 55/89 (61%), Gaps = 8/89 (8%)
Frame = -3
Query: 485 PSSPYSPT--SPNYSPTSPSYSPTSPSY-SPSSPTYS--PSSPYNSGVSPDYSP--SSPQ 327
P++P SPT SP YSP S SPT+PS SPSSPTYS P SP SG SP SP SSP
Sbjct: 121 PTTPSSPTYSSPPYSPAPSSPSPTAPSGPSPSSPTYSSPPYSPTPSGSSPS-SPTYSSPP 179
Query: 326 FSPS-TGYSPSQPGYSPSSTSQYTPQTND 243
+SP+ + SP+ P S+ Y+P +D
Sbjct: 180 YSPTPSSSSPTTPSSPSYSSPPYSPTPSD 208
Score = 63.2 bits (152), Expect = 9e-09
Identities = 44/78 (56%), Positives = 53/78 (67%), Gaps = 6/78 (7%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPT----SPSYSPSSPTYS--PSSPYNSGVSPDYSPSSPQFS 321
SSP +P+SP+YS SP YSPT SPS +PSSPTYS P SP SG SP +PSSP +S
Sbjct: 187 SSPTTPSSPSYS--SPPYSPTPSDPSPS-TPSSPTYSSPPYSPTPSGPSPP-TPSSPTYS 242
Query: 320 PSTGYSPSQPGYSPSSTS 267
S YSP+ G SP++ S
Sbjct: 243 -SPPYSPTPSGSSPTTPS 259
Score = 60.5 bits (145), Expect = 6e-08
Identities = 47/98 (47%), Positives = 53/98 (54%), Gaps = 20/98 (20%)
Frame = -3
Query: 482 SSPYSPTSPN-----YSPTSPSYSPTSPS-YSPSSPTYS--PSSPYNSGVSPD------- 348
SSP +P+SP YSP S SPT+PS SPSSPTYS P SP SG SP
Sbjct: 119 SSPTTPSSPTYSSPPYSPAPSSPSPTAPSGPSPSSPTYSSPPYSPTPSGSSPSSPTYSSP 178
Query: 347 -YSPSSPQFSPSTGYSP--SQPGYS--PSSTSQYTPQT 249
YSP+ SP+T SP S P YS PS S TP +
Sbjct: 179 PYSPTPSSSSPTTPSSPSYSSPPYSPTPSDPSPSTPSS 216
Score = 60.1 bits (144), Expect = 8e-08
Identities = 42/76 (55%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYS---PSSPTYS--PSSPYNSGVSPDYSPSSPQFSPS 315
SP +P+SP YS SP YSPT S PSSPTYS P SP SG SP +PSSP +S S
Sbjct: 210 SPSTPSSPTYS--SPPYSPTPSGPSPPTPSSPTYSSPPYSPTPSGSSPT-TPSSPSYS-S 265
Query: 314 TGYSPSQPGYSPSSTS 267
YSP+ G SPS S
Sbjct: 266 PPYSPTPSGGSPSGGS 281
Score = 58.9 bits (141), Expect = 2e-07
Identities = 42/80 (52%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSP--SSPTYSPSSPYNSGVSPDY-SPSSPQFSPS 315
PS YS SP YSPT S SPT+PS SP SSP YSP+ S +P SPSSP +S S
Sbjct: 103 PSPSYS--SPPYSPTPSSSSPTTPS-SPTYSSPPYSPAPSSPSPTAPSGPSPSSPTYS-S 158
Query: 314 TGYSPSQPGYSPSSTSQYTP 255
YSP+ G SPSS + +P
Sbjct: 159 PPYSPTPSGSSPSSPTYSSP 178
Score = 58.5 bits (140), Expect = 2e-07
Identities = 46/90 (51%), Positives = 57/90 (63%), Gaps = 12/90 (13%)
Frame = -3
Query: 482 SSPYSPTSPNYSPTSPSYSPT--SPSYSPSSPTYSPSSPYNSGVSPDYSP--SSPQFSPS 315
S PYSPT + SPT+PS SPT SP YSP+ + SP++P SG SP SP SSP +SP+
Sbjct: 109 SPPYSPTPSSSSPTTPS-SPTYSSPPYSPAPSSPSPTAP--SGPSPS-SPTYSSPPYSPT 164
Query: 314 -TGYSPSQPGYS-------PSSTSQYTPQT 249
+G SPS P YS PSS+S TP +
Sbjct: 165 PSGSSPSSPTYSSPPYSPTPSSSSPTTPSS 194
Score = 53.9 bits (128), Expect = 5e-06
Identities = 43/97 (44%), Positives = 51/97 (52%), Gaps = 22/97 (22%)
Frame = -3
Query: 479 SPYSPT----SPNYSPTSPSY-SPTSPSYSPSSPTYSP---SSPYNSGVSPDYS------ 342
SP +PT SP YSP +PS SP +PS S SSP YSP SS + SP YS
Sbjct: 77 SPVTPTPVYSSPPYSPGTPSGGSPVTPSPSYSSPPYSPTPSSSSPTTPSSPTYSSPPYSP 136
Query: 341 -PSSPQFSPSTGYSPSQPGYS-------PSSTSQYTP 255
PSSP + +G SPS P YS PS +S +P
Sbjct: 137 APSSPSPTAPSGPSPSSPTYSSPPYSPTPSGSSPSSP 173
[249][TOP]
>UniRef100_Q4DE19 Putative uncharacterized protein n=1 Tax=Trypanosoma cruzi
RepID=Q4DE19_TRYCR
Length = 292
Score = 63.9 bits (154), Expect = 5e-09
Identities = 28/75 (37%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = -3
Query: 473 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF-SPSTGYSPS 297
Y P P Y P P Y P P Y P P Y P P Y P + +P GY P
Sbjct: 12 YGPPQPGYGPPQPGYGPPQPGYGPPQPGYGSPQPGYGAPQPGYGAPQPGYGAPQPGYGPP 71
Query: 296 QPGYSPSSTSQYTPQ 252
QPGY P PQ
Sbjct: 72 QPGYGPPQPGYGAPQ 86
Score = 58.5 bits (140), Expect = 2e-07
Identities = 27/79 (34%), Positives = 28/79 (35%), Gaps = 1/79 (1%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS-PSTG 309
P Y P P Y P P Y P P Y P Y P P Y P + P G
Sbjct: 15 PQPGYGPPQPGYGPPQPGYGPPQPGYGSPQPGYGAPQPGYGAPQPGYGAPQPGYGPPQPG 74
Query: 308 YSPSQPGYSPSSTSQYTPQ 252
Y P QPGY PQ
Sbjct: 75 YGPPQPGYGAPQPGYGPPQ 93
Score = 57.0 bits (136), Expect = 6e-07
Identities = 27/88 (30%), Positives = 31/88 (35%), Gaps = 8/88 (9%)
Frame = -3
Query: 485 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF------ 324
P Y P P Y P P Y P Y P Y P P Y P P +
Sbjct: 22 PQPGYGPPQPGYGPPQPGYGSPQPGYGAPQPGYGAPQPGYGAPQPGYGPPQPGYGPPQPG 81
Query: 323 --SPSTGYSPSQPGYSPSSTSQYTPQTN 246
+P GY P QP Y ++ P TN
Sbjct: 82 YGAPQPGYGPPQPEYGKPASGNALPYTN 109
[250][TOP]
>UniRef100_C4XYE3 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4XYE3_CLAL4
Length = 943
Score = 63.9 bits (154), Expect = 5e-09
Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Frame = -3
Query: 479 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF-SPSTGYS 303
S + P++PN+ P++PS+ P++P++ PS+P + PS+P +P++ P++P F S + Y
Sbjct: 748 SSFEPSAPNFEPSAPSFEPSAPNFEPSAPNFEPSAPNFEPSAPNFEPNAPNFESNAPNYE 807
Query: 302 PSQPGYSPSSTS--QYTPQTNDQDERGQD*WRRSMRP 198
++ + P +Y P+ N +R S P
Sbjct: 808 QTEETFVPEDKRELEYGPEANLPSTYNSKTYRESSSP 844
Score = 58.5 bits (140), Expect = 2e-07
Identities = 23/84 (27%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = -3
Query: 470 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQ 294
+P ++ P++P++ P++PS+ PS+P + PS+P +P++ PS+P F P+ + +
Sbjct: 744 TPNESSFEPSAPNFEPSAPSFEPSAPNFEPSAPNFEPSAPNFEPSAPNFEPNAPNFESNA 803
Query: 293 PGYSPSSTSQYTPQTNDQDERGQD 222
P Y + + + P+ + E G +
Sbjct: 804 PNYEQTEET-FVPEDKRELEYGPE 826