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[1][TOP]
>UniRef100_A7QMF0 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
RepID=A7QMF0_VITVI
Length = 1146
Score = 69.7 bits (169), Expect = 1e-10
Identities = 41/66 (62%), Positives = 47/66 (71%)
Frame = +1
Query: 61 QKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQE 240
QK R +VVIGRMP+M RS CVLY+KD+AELA L DPGG + K EKVILIQE
Sbjct: 117 QKTRNDVVIGRMPIMLRSCCCVLYKKDEAELARLGECPL-DPGGYFV-VKGTEKVILIQE 174
Query: 241 QLSKQQ 258
QLSK +
Sbjct: 175 QLSKNR 180
[2][TOP]
>UniRef100_UPI0001985A70 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001985A70
Length = 1142
Score = 67.0 bits (162), Expect = 6e-10
Identities = 39/68 (57%), Positives = 48/68 (70%)
Frame = +1
Query: 55 KEQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILI 234
K + ++ +VVIGRMP+M RS CVLY+KD+AELA L DPGG + K EKVILI
Sbjct: 121 KTRVEKNDVVIGRMPIMLRSCCCVLYKKDEAELARLGECPL-DPGGYFV-VKGTEKVILI 178
Query: 235 QEQLSKQQ 258
QEQLSK +
Sbjct: 179 QEQLSKNR 186
[3][TOP]
>UniRef100_B9SHS2 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9SHS2_RICCO
Length = 1139
Score = 66.6 bits (161), Expect = 8e-10
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = +1
Query: 55 KEQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILI 234
K + ++ +VVIGRMP+M RS CVLY KD+AELA L DPGG + K EKVILI
Sbjct: 137 KTRVEKNDVVIGRMPIMLRSRSCVLYGKDEAELARLGECPL-DPGGYFV-IKGTEKVILI 194
Query: 235 QEQLSKQQ 258
QEQLSK +
Sbjct: 195 QEQLSKNR 202
[4][TOP]
>UniRef100_UPI00005DC295 NRPC2; DNA binding / DNA-directed RNA polymerase/ ribonucleoside
binding n=1 Tax=Arabidopsis thaliana RepID=UPI00005DC295
Length = 1161
Score = 65.9 bits (159), Expect = 1e-09
Identities = 37/68 (54%), Positives = 46/68 (67%)
Frame = +1
Query: 55 KEQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILI 234
K + + NV+IGRMP+M RS RCVL+ KD+ ELA L DPGG + K EKV+LI
Sbjct: 132 KAKSAKDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPL-DPGGYFI-IKGTEKVLLI 189
Query: 235 QEQLSKQQ 258
QEQLSK +
Sbjct: 190 QEQLSKNR 197
[5][TOP]
>UniRef100_Q9FKF1 DNA-directed RNA polymerase n=1 Tax=Arabidopsis thaliana
RepID=Q9FKF1_ARATH
Length = 1194
Score = 65.9 bits (159), Expect = 1e-09
Identities = 37/68 (54%), Positives = 46/68 (67%)
Frame = +1
Query: 55 KEQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILI 234
K + + NV+IGRMP+M RS RCVL+ KD+ ELA L DPGG + K EKV+LI
Sbjct: 153 KAKSAKDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPL-DPGGYFI-IKGTEKVLLI 210
Query: 235 QEQLSKQQ 258
QEQLSK +
Sbjct: 211 QEQLSKNR 218
[6][TOP]
>UniRef100_B9IDF9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9IDF9_POPTR
Length = 1141
Score = 64.7 bits (156), Expect = 3e-09
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = +1
Query: 55 KEQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILI 234
KE+ + +VVIGRMP+M RS CVLY K++AELA L DPGG + K EKVILI
Sbjct: 120 KEKMIKNDVVIGRMPIMLRSCCCVLYGKNEAELARLGECPL-DPGGYFV-VKGTEKVILI 177
Query: 235 QEQLSKQQ 258
QEQLSK +
Sbjct: 178 QEQLSKNR 185
[7][TOP]
>UniRef100_B6JW67 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6JW67_SCHJY
Length = 1160
Score = 62.8 bits (151), Expect = 1e-08
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = +1
Query: 67 QRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQL 246
+R+NV IGRMPVM RS++CVLY K + ELA L DPGG + K EKVIL+QEQL
Sbjct: 146 RRRNVPIGRMPVMLRSNKCVLYGKSEKELAALNECPL-DPGGYFV-VKGTEKVILVQEQL 203
Query: 247 SKQQ 258
SK +
Sbjct: 204 SKNR 207
[8][TOP]
>UniRef100_Q4PBR7 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis
RepID=Q4PBR7_USTMA
Length = 1169
Score = 60.5 bits (145), Expect = 6e-08
Identities = 35/64 (54%), Positives = 45/64 (70%)
Frame = +1
Query: 67 QRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQL 246
+R+NV IGR+PVM RS++CVL K + ELA+ L DPGG + K EKVIL+QEQL
Sbjct: 150 RRKNVAIGRIPVMLRSNKCVLANKSEKELAKMSECPL-DPGGYFV-VKGTEKVILVQEQL 207
Query: 247 SKQQ 258
SK +
Sbjct: 208 SKNR 211
[9][TOP]
>UniRef100_Q10233 DNA-directed RNA polymerase III subunit RPC2 n=1
Tax=Schizosaccharomyces pombe RepID=RPC2_SCHPO
Length = 1165
Score = 60.5 bits (145), Expect = 6e-08
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = +1
Query: 55 KEQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILI 234
K+ +R+NV IGRMPVM RS++CVL K++ E+A L DPGG + K EKVIL+
Sbjct: 147 KQVVRRRNVPIGRMPVMLRSNKCVLSGKNEMEMAALNECPL-DPGGYFI-VKGTEKVILV 204
Query: 235 QEQLSKQQ 258
QEQLSK +
Sbjct: 205 QEQLSKNR 212
[10][TOP]
>UniRef100_Q84R88 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q84R88_ORYSJ
Length = 1174
Score = 60.1 bits (144), Expect = 8e-08
Identities = 35/67 (52%), Positives = 44/67 (65%)
Frame = +1
Query: 58 EQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQ 237
E K++ N +IG +P+M RS CVL KD+AELA + DPGG + K EKVILIQ
Sbjct: 155 ELKRKPNFIIGYLPIMLRSHACVLNGKDEAELAR-YGECPLDPGGYFI-VKGTEKVILIQ 212
Query: 238 EQLSKQQ 258
EQLSK +
Sbjct: 213 EQLSKNR 219
[11][TOP]
>UniRef100_Q10JZ3 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q10JZ3_ORYSJ
Length = 1155
Score = 60.1 bits (144), Expect = 8e-08
Identities = 35/67 (52%), Positives = 44/67 (65%)
Frame = +1
Query: 58 EQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQ 237
E K++ N +IG +P+M RS CVL KD+AELA + DPGG + K EKVILIQ
Sbjct: 136 ELKRKPNFIIGYLPIMLRSHACVLNGKDEAELAR-YGECPLDPGGYFI-VKGTEKVILIQ 193
Query: 238 EQLSKQQ 258
EQLSK +
Sbjct: 194 EQLSKNR 200
[12][TOP]
>UniRef100_Q10JZ2 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q10JZ2_ORYSJ
Length = 1039
Score = 60.1 bits (144), Expect = 8e-08
Identities = 35/67 (52%), Positives = 44/67 (65%)
Frame = +1
Query: 58 EQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQ 237
E K++ N +IG +P+M RS CVL KD+AELA + DPGG + K EKVILIQ
Sbjct: 136 ELKRKPNFIIGYLPIMLRSHACVLNGKDEAELAR-YGECPLDPGGYFI-VKGTEKVILIQ 193
Query: 238 EQLSKQQ 258
EQLSK +
Sbjct: 194 EQLSKNR 200
[13][TOP]
>UniRef100_B9F8X6 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9F8X6_ORYSJ
Length = 1115
Score = 60.1 bits (144), Expect = 8e-08
Identities = 35/67 (52%), Positives = 44/67 (65%)
Frame = +1
Query: 58 EQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQ 237
E K++ N +IG +P+M RS CVL KD+AELA + DPGG + K EKVILIQ
Sbjct: 196 ELKRKPNFIIGYLPIMLRSHACVLNGKDEAELAR-YGECPLDPGGYFI-VKGTEKVILIQ 253
Query: 238 EQLSKQQ 258
EQLSK +
Sbjct: 254 EQLSKNR 260
[14][TOP]
>UniRef100_B8AR02 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group
RepID=B8AR02_ORYSI
Length = 1117
Score = 60.1 bits (144), Expect = 8e-08
Identities = 35/67 (52%), Positives = 44/67 (65%)
Frame = +1
Query: 58 EQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQ 237
E K++ N +IG +P+M RS CVL KD+AELA + DPGG + K EKVILIQ
Sbjct: 198 ELKRKPNFIIGYLPIMLRSHACVLNGKDEAELAR-YGECPLDPGGYFI-VKGTEKVILIQ 255
Query: 238 EQLSKQQ 258
EQLSK +
Sbjct: 256 EQLSKNR 262
[15][TOP]
>UniRef100_C5Z6F6 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5Z6F6_SORBI
Length = 1137
Score = 58.9 bits (141), Expect = 2e-07
Identities = 34/65 (52%), Positives = 43/65 (66%)
Frame = +1
Query: 64 KQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQ 243
K+R +IG MP+M RSS C+L E D+ ELA+ + DPGG + K EKVILIQEQ
Sbjct: 120 KRRNKFIIGYMPIMLRSSACILNEMDEDELAK-YGECPLDPGGYFV-VKGTEKVILIQEQ 177
Query: 244 LSKQQ 258
LSK +
Sbjct: 178 LSKNR 182
[16][TOP]
>UniRef100_A9RNX6 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9RNX6_PHYPA
Length = 1135
Score = 58.9 bits (141), Expect = 2e-07
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = +1
Query: 76 NVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLSKQ 255
++ IGRMP+M RSSRC+L K++A+LA+ L DPGG + K EKVILIQEQLSK
Sbjct: 128 SINIGRMPIMLRSSRCILAGKNEAQLAKVGECPL-DPGGYFV-VKGTEKVILIQEQLSKN 185
Query: 256 Q 258
+
Sbjct: 186 R 186
[17][TOP]
>UniRef100_A8IY03 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IY03_CHLRE
Length = 1161
Score = 58.9 bits (141), Expect = 2e-07
Identities = 34/60 (56%), Positives = 42/60 (70%)
Frame = +1
Query: 79 VVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLSKQQ 258
V IGRMP+M R RCVLY K++A+LA+ L DPGG + + EKVILIQEQLSK +
Sbjct: 141 VSIGRMPLMLRCDRCVLYNKNEAQLAQLGECPL-DPGGYFI-VRGTEKVILIQEQLSKNR 198
[18][TOP]
>UniRef100_UPI0000E487B4 PREDICTED: similar to Polymerase (RNA) III (DNA directed)
polypeptide B n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E487B4
Length = 830
Score = 58.5 bits (140), Expect = 2e-07
Identities = 36/63 (57%), Positives = 42/63 (66%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R N+ IGRMP+M RSS CVL K AELA+ L DPGG + + EKVILIQEQLS
Sbjct: 144 RNNLPIGRMPIMLRSSNCVLTGKSPAELAKLNECPL-DPGGYFI-VRGTEKVILIQEQLS 201
Query: 250 KQQ 258
K +
Sbjct: 202 KNR 204
[19][TOP]
>UniRef100_C3YYC3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
RepID=C3YYC3_BRAFL
Length = 1137
Score = 58.5 bits (140), Expect = 2e-07
Identities = 37/63 (58%), Positives = 42/63 (66%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R N+ IGRMP+M RSS CVL K +ELA+ L DPGG L K EKVILIQEQLS
Sbjct: 120 RNNLPIGRMPIMLRSSNCVLTGKSPSELAKLKECPL-DPGGYFL-VKGVEKVILIQEQLS 177
Query: 250 KQQ 258
K +
Sbjct: 178 KNR 180
[20][TOP]
>UniRef100_UPI00017918AB PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2
(RNA polymerase III subunit C2) (DNA-directed RNA
polymerase III subunit B) (DNA-directed RNA polymerase
III 127.6 kDa polypeptide) (C128) n=1 Tax=Acyrthosiphon
pisum RepID=UPI00017918AB
Length = 1112
Score = 57.4 bits (137), Expect = 5e-07
Identities = 31/63 (49%), Positives = 43/63 (68%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R+ +IGR+P+M RS+RC LY+K DAELA+ + D GG + K EKVIL+QEQ +
Sbjct: 110 RKGFIIGRLPIMLRSNRCCLYQKSDAELAK-MKECIYDSGGYFI-VKGTEKVILMQEQPA 167
Query: 250 KQQ 258
K +
Sbjct: 168 KNK 170
[21][TOP]
>UniRef100_B8BQM2 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana
CCMP1335 RepID=B8BQM2_THAPS
Length = 1108
Score = 57.4 bits (137), Expect = 5e-07
Identities = 33/63 (52%), Positives = 44/63 (69%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
++ V+IGRMP+M RSS+C+L +K + ELA+ DPGG + K EKVILIQEQLS
Sbjct: 91 KKKVMIGRMPIMLRSSKCLLRDKSERELAQ-MKECPYDPGGYFV-IKGVEKVILIQEQLS 148
Query: 250 KQQ 258
K +
Sbjct: 149 KNR 151
[22][TOP]
>UniRef100_B0D7Q0 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0D7Q0_LACBS
Length = 1142
Score = 57.4 bits (137), Expect = 5e-07
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAE-TWCSALSDPGGSIL*SKANEKVILIQEQL 246
++NV IGR+P+M RSS+CVL + +A+LA T C DPGG + K EKVIL+QEQL
Sbjct: 135 QRNVNIGRLPIMLRSSKCVLTGRTEAQLARMTECPL--DPGGYFV-VKGTEKVILVQEQL 191
Query: 247 SKQQ 258
SK +
Sbjct: 192 SKNR 195
[23][TOP]
>UniRef100_A8NJT3 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8NJT3_COPC7
Length = 1140
Score = 57.4 bits (137), Expect = 5e-07
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAE-TWCSALSDPGGSIL*SKANEKVILIQEQL 246
++NV IGR+P+M RS++CVL K +A+LA T C DPGG + K EKVIL+QEQL
Sbjct: 133 QRNVNIGRLPIMLRSNKCVLTGKTEAQLARMTECPL--DPGGYFV-VKGTEKVILVQEQL 189
Query: 247 SKQQ 258
SK +
Sbjct: 190 SKNR 193
[24][TOP]
>UniRef100_A8P4S3 DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide,
putative n=1 Tax=Brugia malayi RepID=A8P4S3_BRUMA
Length = 1104
Score = 56.6 bits (135), Expect(2) = 5e-07
Identities = 31/63 (49%), Positives = 43/63 (68%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R ++IG+MPVM RSS+CVL +++ELA DPGG + + +EKV+LIQEQLS
Sbjct: 118 RNGLIIGKMPVMLRSSKCVLKNMNESELARVQ-ECPYDPGGYFI-IRGSEKVVLIQEQLS 175
Query: 250 KQQ 258
K +
Sbjct: 176 KNR 178
Score = 20.4 bits (41), Expect(2) = 5e-07
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 20 DIEYTQGSHDNPRN 61
DIEYT+GS RN
Sbjct: 106 DIEYTRGSQRVLRN 119
[25][TOP]
>UniRef100_Q01FH9 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri
RepID=Q01FH9_OSTTA
Length = 2569
Score = 57.0 bits (136), Expect = 6e-07
Identities = 35/60 (58%), Positives = 42/60 (70%)
Frame = +1
Query: 79 VVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLSKQQ 258
+VIGR+P+M RSSRCVL K++ ELA L DPGG + K EKVILIQEQLSK +
Sbjct: 161 IVIGRIPLMLRSSRCVLTGKNEEELARLGECPL-DPGGYFI-VKGVEKVILIQEQLSKNR 218
[26][TOP]
>UniRef100_A4RS40 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus
CCE9901 RepID=A4RS40_OSTLU
Length = 1146
Score = 57.0 bits (136), Expect = 6e-07
Identities = 36/60 (60%), Positives = 42/60 (70%)
Frame = +1
Query: 79 VVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLSKQQ 258
VVIGR+P+M RSSRCVL K++ ELA L DPGG + K EKVILIQEQLSK +
Sbjct: 133 VVIGRIPLMLRSSRCVLTGKNEDELARLGECPL-DPGGYFI-VKGVEKVILIQEQLSKNR 190
[27][TOP]
>UniRef100_A8WJV6 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae AF16
RepID=A8WJV6_CAEBR
Length = 1160
Score = 57.0 bits (136), Expect = 6e-07
Identities = 32/63 (50%), Positives = 44/63 (69%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
++++VIGRMP+M RSS+C+L + + ELA DPGG + K +EKVILIQEQLS
Sbjct: 116 KKDLVIGRMPIMLRSSKCILRDLAEEELARVQ-ECPHDPGGYFV-VKGSEKVILIQEQLS 173
Query: 250 KQQ 258
K +
Sbjct: 174 KNR 176
[28][TOP]
>UniRef100_B5VS89 YOR207Cp-like protein (Fragment) n=1 Tax=Saccharomyces cerevisiae
AWRI1631 RepID=B5VS89_YEAS6
Length = 415
Score = 57.0 bits (136), Expect = 6e-07
Identities = 30/62 (48%), Positives = 45/62 (72%)
Frame = +1
Query: 73 QNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLSK 252
++V IGRMP+M RS++C+LY+ D++++A+ L DPGG + EKVIL+QEQLSK
Sbjct: 145 KDVEIGRMPIMLRSNKCILYDADESKMAKLNECPL-DPGGYFI-VNGTEKVILVQEQLSK 202
Query: 253 QQ 258
+
Sbjct: 203 NR 204
[29][TOP]
>UniRef100_P22276 DNA-directed RNA polymerase III subunit RPC2 n=5 Tax=Saccharomyces
cerevisiae RepID=RPC2_YEAST
Length = 1149
Score = 57.0 bits (136), Expect = 6e-07
Identities = 30/62 (48%), Positives = 45/62 (72%)
Frame = +1
Query: 73 QNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLSK 252
++V IGRMP+M RS++C+LY+ D++++A+ L DPGG + EKVIL+QEQLSK
Sbjct: 145 KDVEIGRMPIMLRSNKCILYDADESKMAKLNECPL-DPGGYFI-VNGTEKVILVQEQLSK 202
Query: 253 QQ 258
+
Sbjct: 203 NR 204
[30][TOP]
>UniRef100_UPI0000D56081 PREDICTED: similar to RNA polymerase III 128kD subunit CG8344-PA
n=1 Tax=Tribolium castaneum RepID=UPI0000D56081
Length = 1122
Score = 56.6 bits (135), Expect = 8e-07
Identities = 34/67 (50%), Positives = 44/67 (65%)
Frame = +1
Query: 58 EQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQ 237
++ + ++IGRMP+M RSS CVL K + ELA+ L DPGG + K EKVILIQ
Sbjct: 117 QRVSKAGLMIGRMPIMLRSSNCVLTNKSEYELAKMNECPL-DPGGYFV-VKGQEKVILIQ 174
Query: 238 EQLSKQQ 258
EQLSK +
Sbjct: 175 EQLSKNR 181
[31][TOP]
>UniRef100_Q2N123 RNA polymerase III second largest subunit (Fragment) n=1
Tax=Leucosolenia sp. AR-2003 RepID=Q2N123_9METZ
Length = 404
Score = 56.6 bits (135), Expect = 8e-07
Identities = 34/63 (53%), Positives = 42/63 (66%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R+ IGRMP+M RSS CVL++K +ELA+ DPGG + K EKVILIQEQLS
Sbjct: 85 RKAFTIGRMPIMLRSSHCVLHDKSLSELAKL-DECPYDPGGYFV-VKGTEKVILIQEQLS 142
Query: 250 KQQ 258
K +
Sbjct: 143 KNR 145
[32][TOP]
>UniRef100_C6HGH3 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus H143
RepID=C6HGH3_AJECH
Length = 1227
Score = 56.6 bits (135), Expect = 8e-07
Identities = 32/68 (47%), Positives = 43/68 (63%)
Frame = +1
Query: 55 KEQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILI 234
+++ +R IGRMPVM RSS+CVL K +AE+ + DPGG + EKVIL+
Sbjct: 205 RQRVKRNGTAIGRMPVMLRSSKCVLSNKSEAEM-QLLQECPLDPGGYFI-VNGTEKVILV 262
Query: 235 QEQLSKQQ 258
QEQLSK +
Sbjct: 263 QEQLSKNR 270
[33][TOP]
>UniRef100_C5JTE0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis
SLH14081 RepID=C5JTE0_AJEDS
Length = 1204
Score = 56.6 bits (135), Expect = 8e-07
Identities = 32/68 (47%), Positives = 43/68 (63%)
Frame = +1
Query: 55 KEQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILI 234
+++ +R IGRMPVM RSS+CVL K +AE+ + DPGG + EKVIL+
Sbjct: 182 RQRVKRNGTAIGRMPVMLRSSKCVLSNKSEAEM-QLLHECPLDPGGYFI-VNGTEKVILV 239
Query: 235 QEQLSKQQ 258
QEQLSK +
Sbjct: 240 QEQLSKNR 247
[34][TOP]
>UniRef100_C5GKN6 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis ER-3
RepID=C5GKN6_AJEDR
Length = 1228
Score = 56.6 bits (135), Expect = 8e-07
Identities = 32/68 (47%), Positives = 43/68 (63%)
Frame = +1
Query: 55 KEQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILI 234
+++ +R IGRMPVM RSS+CVL K +AE+ + DPGG + EKVIL+
Sbjct: 206 RQRVKRNGTAIGRMPVMLRSSKCVLSNKSEAEM-QLLHECPLDPGGYFI-VNGTEKVILV 263
Query: 235 QEQLSKQQ 258
QEQLSK +
Sbjct: 264 QEQLSKNR 271
[35][TOP]
>UniRef100_C4R793 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4R793_PICPG
Length = 1158
Score = 56.6 bits (135), Expect = 8e-07
Identities = 28/62 (45%), Positives = 44/62 (70%)
Frame = +1
Query: 73 QNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLSK 252
+++ IG+MP+M RS++C+L KD++++A + C DPGG + EKVIL+QEQLSK
Sbjct: 148 RDLEIGKMPIMLRSNKCILESKDESQMA-SLCECPLDPGGYFI-VNGTEKVILVQEQLSK 205
Query: 253 QQ 258
+
Sbjct: 206 NR 207
[36][TOP]
>UniRef100_C1HBD0 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb01 RepID=C1HBD0_PARBA
Length = 1205
Score = 56.6 bits (135), Expect = 8e-07
Identities = 32/68 (47%), Positives = 43/68 (63%)
Frame = +1
Query: 55 KEQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILI 234
+++ +R IGRMPVM RSS+CVL K +AE+ + DPGG + EKVIL+
Sbjct: 183 RQRVKRNGTAIGRMPVMLRSSKCVLSNKSEAEM-QLLQECPLDPGGYFI-VNGTEKVILV 240
Query: 235 QEQLSKQQ 258
QEQLSK +
Sbjct: 241 QEQLSKNR 248
[37][TOP]
>UniRef100_C1GLZ2 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb18 RepID=C1GLZ2_PARBD
Length = 1209
Score = 56.6 bits (135), Expect = 8e-07
Identities = 32/68 (47%), Positives = 43/68 (63%)
Frame = +1
Query: 55 KEQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILI 234
+++ +R IGRMPVM RSS+CVL K +AE+ + DPGG + EKVIL+
Sbjct: 225 RQRVKRNGTAIGRMPVMLRSSKCVLSNKSEAEM-QLLQECPLDPGGYFI-VNGTEKVILV 282
Query: 235 QEQLSKQQ 258
QEQLSK +
Sbjct: 283 QEQLSKNR 290
[38][TOP]
>UniRef100_C0SI08 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb03 RepID=C0SI08_PARBP
Length = 1232
Score = 56.6 bits (135), Expect = 8e-07
Identities = 32/68 (47%), Positives = 43/68 (63%)
Frame = +1
Query: 55 KEQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILI 234
+++ +R IGRMPVM RSS+CVL K +AE+ + DPGG + EKVIL+
Sbjct: 225 RQRVKRNGTAIGRMPVMLRSSKCVLSNKSEAEM-QLLQECPLDPGGYFI-VNGTEKVILV 282
Query: 235 QEQLSKQQ 258
QEQLSK +
Sbjct: 283 QEQLSKNR 290
[39][TOP]
>UniRef100_C0P0A1 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
RepID=C0P0A1_AJECG
Length = 1227
Score = 56.6 bits (135), Expect = 8e-07
Identities = 32/68 (47%), Positives = 43/68 (63%)
Frame = +1
Query: 55 KEQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILI 234
+++ +R IGRMPVM RSS+CVL K +AE+ + DPGG + EKVIL+
Sbjct: 205 RQRVKRNGTAIGRMPVMLRSSKCVLSNKSEAEM-QLLQECPLDPGGYFI-VNGTEKVILV 262
Query: 235 QEQLSKQQ 258
QEQLSK +
Sbjct: 263 QEQLSKNR 270
[40][TOP]
>UniRef100_A7EEL3 DNA-directed RNA polymerase n=1 Tax=Sclerotinia sclerotiorum 1980
UF-70 RepID=A7EEL3_SCLS1
Length = 1230
Score = 56.6 bits (135), Expect = 8e-07
Identities = 32/63 (50%), Positives = 43/63 (68%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R+N+ IGRMP+M +SS+C L K+D ++A AL DPGG + EKVIL+QEQLS
Sbjct: 194 RKNIAIGRMPIMLKSSKCRLNGKNDRQMAHMNECAL-DPGGYFV-VNGTEKVILVQEQLS 251
Query: 250 KQQ 258
K +
Sbjct: 252 KNR 254
[41][TOP]
>UniRef100_A6RTM3 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana
B05.10 RepID=A6RTM3_BOTFB
Length = 490
Score = 56.6 bits (135), Expect = 8e-07
Identities = 32/63 (50%), Positives = 43/63 (68%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R+N+ IGRMP+M +SS+C L K+D ++A AL DPGG + EKVIL+QEQLS
Sbjct: 193 RKNIAIGRMPIMLKSSKCRLAGKNDRQMAHMNECAL-DPGGYFV-VNGTEKVILVQEQLS 250
Query: 250 KQQ 258
K +
Sbjct: 251 KNR 253
[42][TOP]
>UniRef100_A6R9I0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
RepID=A6R9I0_AJECN
Length = 1186
Score = 56.6 bits (135), Expect = 8e-07
Identities = 32/68 (47%), Positives = 43/68 (63%)
Frame = +1
Query: 55 KEQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILI 234
+++ +R IGRMPVM RSS+CVL K +AE+ + DPGG + EKVIL+
Sbjct: 173 RQRVKRNGTAIGRMPVMLRSSKCVLSNKSEAEM-QLLQECPLDPGGYFI-VNGTEKVILV 230
Query: 235 QEQLSKQQ 258
QEQLSK +
Sbjct: 231 QEQLSKNR 238
[43][TOP]
>UniRef100_A2Q8V9 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2Q8V9_ASPNC
Length = 1225
Score = 56.6 bits (135), Expect = 8e-07
Identities = 34/68 (50%), Positives = 43/68 (63%)
Frame = +1
Query: 55 KEQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILI 234
+++ R+ V IGRMPVM RSS+CVL K AE+ L DPGG + EKVIL+
Sbjct: 205 RQRVMRKGVAIGRMPVMLRSSKCVLANKTPAEMTVLNECPL-DPGGYFI-VNGTEKVILV 262
Query: 235 QEQLSKQQ 258
QEQLSK +
Sbjct: 263 QEQLSKNR 270
[44][TOP]
>UniRef100_Q27492 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis elegans
RepID=Q27492_CAEEL
Length = 1154
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/63 (49%), Positives = 44/63 (69%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
+++++IGRMP+M RSS+C+L + + ELA DPGG + K +EKVILIQEQLS
Sbjct: 131 KKDLIIGRMPIMLRSSKCILRDLAEEELARVQ-ECPYDPGGYFV-VKGSEKVILIQEQLS 188
Query: 250 KQQ 258
K +
Sbjct: 189 KNR 191
[45][TOP]
>UniRef100_C1FIF0 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1FIF0_9CHLO
Length = 1159
Score = 55.8 bits (133), Expect = 1e-06
Identities = 34/60 (56%), Positives = 40/60 (66%)
Frame = +1
Query: 79 VVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLSKQQ 258
V IGR+P+M RSSRC+L K + ELA L DPGG + K EKVILIQEQLSK +
Sbjct: 152 VTIGRIPLMLRSSRCILTGKSEEELARLGECPL-DPGGYFV-VKGTEKVILIQEQLSKNR 209
[46][TOP]
>UniRef100_C4JMP0 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704
RepID=C4JMP0_UNCRE
Length = 1202
Score = 55.8 bits (133), Expect = 1e-06
Identities = 32/68 (47%), Positives = 43/68 (63%)
Frame = +1
Query: 55 KEQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILI 234
+++ +R IGRMPVM RSS+CVL +K E+ + L DPGG + EKVIL+
Sbjct: 180 RQRVKRNGTAIGRMPVMLRSSKCVLSKKSPGEMYQLHECPL-DPGGYFI-VNGTEKVILV 237
Query: 235 QEQLSKQQ 258
QEQLSK +
Sbjct: 238 QEQLSKNR 245
[47][TOP]
>UniRef100_A8PVW9 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
RepID=A8PVW9_MALGO
Length = 1131
Score = 55.8 bits (133), Expect = 1e-06
Identities = 33/64 (51%), Positives = 44/64 (68%)
Frame = +1
Query: 67 QRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQL 246
+R+NV IGR+P+M RS++C L +D+A LA L DPGG + K EKVIL+QEQL
Sbjct: 122 RRKNVPIGRLPIMLRSNKCWLAGQDEATLARMNECPL-DPGGYFV-VKGTEKVILVQEQL 179
Query: 247 SKQQ 258
SK +
Sbjct: 180 SKNR 183
[48][TOP]
>UniRef100_UPI00015B53C8 PREDICTED: similar to Polymerase (RNA) III (DNA directed)
polypeptide B n=1 Tax=Nasonia vitripennis
RepID=UPI00015B53C8
Length = 1127
Score = 55.5 bits (132), Expect = 2e-06
Identities = 32/63 (50%), Positives = 41/63 (65%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R N++IGRMP+M RSS CVL EK + ELA+ DPGG + EKVILIQEQ+
Sbjct: 124 RNNLLIGRMPIMLRSSNCVLSEKSNFELAK-MNECPHDPGGYFI-INGQEKVILIQEQML 181
Query: 250 KQQ 258
+ +
Sbjct: 182 RNR 184
[49][TOP]
>UniRef100_B3S5S8 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
RepID=B3S5S8_TRIAD
Length = 1016
Score = 55.1 bits (131), Expect = 2e-06
Identities = 35/64 (54%), Positives = 42/64 (65%)
Frame = +1
Query: 67 QRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQL 246
+RQ + IGR+PVM RSS CVL K ELA+ + DPGG + K EKVILIQEQL
Sbjct: 132 RRQKLPIGRVPVMLRSSICVLNGKSPVELAK-YNECPIDPGGYFI-VKGVEKVILIQEQL 189
Query: 247 SKQQ 258
SK +
Sbjct: 190 SKNR 193
[50][TOP]
>UniRef100_UPI0001926473 PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2
n=1 Tax=Hydra magnipapillata RepID=UPI0001926473
Length = 534
Score = 54.7 bits (130), Expect = 3e-06
Identities = 32/63 (50%), Positives = 43/63 (68%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R ++ IGRMP+M RSS CVL K++ ELA+ DPGG + + +EKV+LIQEQLS
Sbjct: 115 RNSLPIGRMPIMLRSSNCVLAGKNEIELAKL-NECPIDPGGYFV-VRGSEKVLLIQEQLS 172
Query: 250 KQQ 258
K +
Sbjct: 173 KNR 175
[51][TOP]
>UniRef100_C8VU19 DNA-directed RNA polymerase III, beta subunit, putative
(AFU_orthologue; AFUA_1G02460) n=2 Tax=Emericella
nidulans RepID=C8VU19_EMENI
Length = 1225
Score = 54.7 bits (130), Expect = 3e-06
Identities = 33/68 (48%), Positives = 44/68 (64%)
Frame = +1
Query: 55 KEQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILI 234
+++ +R+ V IGRMPVM RSS+CVL K A++ L DPGG + EKVIL+
Sbjct: 206 RQRVRRKGVSIGRMPVMLRSSKCVLGNKTPAQMTVLNECPL-DPGGYFI-VNGTEKVILV 263
Query: 235 QEQLSKQQ 258
QEQLSK +
Sbjct: 264 QEQLSKNR 271
[52][TOP]
>UniRef100_Q0V2J8 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum
RepID=Q0V2J8_PHANO
Length = 1443
Score = 54.7 bits (130), Expect = 3e-06
Identities = 29/64 (45%), Positives = 43/64 (67%)
Frame = +1
Query: 67 QRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQL 246
+R + IGRMP+M +S++CVL K+D E+A DPGG + ++ EKVIL+QEQL
Sbjct: 440 KRTGIKIGRMPIMLKSNKCVLAAKNDREMA-VMDECPLDPGGYFI-TRGQEKVILVQEQL 497
Query: 247 SKQQ 258
+K +
Sbjct: 498 NKNR 501
[53][TOP]
>UniRef100_Q0CN89 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
RepID=Q0CN89_ASPTN
Length = 1219
Score = 54.3 bits (129), Expect = 4e-06
Identities = 32/68 (47%), Positives = 43/68 (63%)
Frame = +1
Query: 55 KEQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILI 234
+++ +++ IGRMPVM RSS+CVL K AE+ L DPGG + EKVIL+
Sbjct: 200 RQRVRKRGYAIGRMPVMLRSSKCVLANKSPAEMTVLNECPL-DPGGYFI-VNGTEKVILV 257
Query: 235 QEQLSKQQ 258
QEQLSK +
Sbjct: 258 QEQLSKNR 265
[54][TOP]
>UniRef100_C1N4K3 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N4K3_9CHLO
Length = 1197
Score = 53.9 bits (128), Expect = 5e-06
Identities = 33/60 (55%), Positives = 40/60 (66%)
Frame = +1
Query: 79 VVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLSKQQ 258
+ IGR+P+M RSSRCVL K + ELA L DPGG + K EKV+LIQEQLSK +
Sbjct: 187 ITIGRIPLMLRSSRCVLTGKSEDELARLGECPL-DPGGYFV-VKGVEKVVLIQEQLSKNR 244
[55][TOP]
>UniRef100_C5FVS4 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
RepID=C5FVS4_NANOT
Length = 1211
Score = 53.9 bits (128), Expect = 5e-06
Identities = 32/68 (47%), Positives = 41/68 (60%)
Frame = +1
Query: 55 KEQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILI 234
+++ +R IGRMPVM RSS+CVL K E+ T DPGG + EKVIL+
Sbjct: 189 RQRVKRNGTAIGRMPVMLRSSKCVLSNKSAREM-YTLHECPLDPGGYFI-VNGTEKVILV 246
Query: 235 QEQLSKQQ 258
QEQLSK +
Sbjct: 247 QEQLSKNR 254
[56][TOP]
>UniRef100_B0XMI5 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus
RepID=B0XMI5_ASPFC
Length = 1200
Score = 53.9 bits (128), Expect = 5e-06
Identities = 32/68 (47%), Positives = 43/68 (63%)
Frame = +1
Query: 55 KEQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILI 234
+++ R+ V IGRMP+M RSS+CVL K +E+ L DPGG + EKVIL+
Sbjct: 182 RQRVTRKGVSIGRMPIMLRSSKCVLANKTPSEMTVLNECPL-DPGGYFI-VNGTEKVILV 239
Query: 235 QEQLSKQQ 258
QEQLSK +
Sbjct: 240 QEQLSKNR 247
[57][TOP]
>UniRef100_A1D510 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1D510_NEOFI
Length = 1200
Score = 53.9 bits (128), Expect = 5e-06
Identities = 32/68 (47%), Positives = 43/68 (63%)
Frame = +1
Query: 55 KEQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILI 234
+++ R+ V IGRMP+M RSS+CVL K +E+ L DPGG + EKVIL+
Sbjct: 182 RQRVTRKGVSIGRMPIMLRSSKCVLANKTPSEMTVLNECPL-DPGGYFI-VNGTEKVILV 239
Query: 235 QEQLSKQQ 258
QEQLSK +
Sbjct: 240 QEQLSKNR 247
[58][TOP]
>UniRef100_UPI000194E18E PREDICTED: hypothetical protein n=1 Tax=Taeniopygia guttata
RepID=UPI000194E18E
Length = 1280
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R + IGRMP+M RSS CVL K AE A+ L DPGG + K EKVILIQEQLS
Sbjct: 276 RNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPL-DPGGYFI-VKGVEKVILIQEQLS 333
Query: 250 KQQ 258
K +
Sbjct: 334 KNR 336
[59][TOP]
>UniRef100_UPI0001560749 PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2
(RNA polymerase III subunit C2) (DNA-directed RNA
polymerase III subunit B) (DNA-directed RNA polymerase
III 127.6 kDa polypeptide) (C128) n=1 Tax=Equus caballus
RepID=UPI0001560749
Length = 1133
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R + IGRMP+M RSS CVL K AE A+ L DPGG + K EKVILIQEQLS
Sbjct: 128 RNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPL-DPGGYFI-VKGVEKVILIQEQLS 185
Query: 250 KQQ 258
K +
Sbjct: 186 KNR 188
[60][TOP]
>UniRef100_UPI000155CB1A PREDICTED: similar to Polymerase (RNA) III (DNA directed)
polypeptide B n=1 Tax=Ornithorhynchus anatinus
RepID=UPI000155CB1A
Length = 1113
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R + IGRMP+M RSS CVL K AE A+ L DPGG + K EKVILIQEQLS
Sbjct: 108 RNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPL-DPGGYFI-VKGVEKVILIQEQLS 165
Query: 250 KQQ 258
K +
Sbjct: 166 KNR 168
[61][TOP]
>UniRef100_UPI0000E7F911 PREDICTED: similar to Polymerase (RNA) III (DNA directed)
polypeptide B n=1 Tax=Gallus gallus RepID=UPI0000E7F911
Length = 1126
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R + IGRMP+M RSS CVL K AE A+ L DPGG + K EKVILIQEQLS
Sbjct: 122 RNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPL-DPGGYFI-VKGVEKVILIQEQLS 179
Query: 250 KQQ 258
K +
Sbjct: 180 KNR 182
[62][TOP]
>UniRef100_UPI0000E23379 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide B
isoform 2 n=1 Tax=Pan troglodytes RepID=UPI0000E23379
Length = 1133
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R + IGRMP+M RSS CVL K AE A+ L DPGG + K EKVILIQEQLS
Sbjct: 128 RNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPL-DPGGYFI-VKGVEKVILIQEQLS 185
Query: 250 KQQ 258
K +
Sbjct: 186 KNR 188
[63][TOP]
>UniRef100_UPI0000503D79 polymerase (RNA) III (DNA directed) polypeptide B n=2 Tax=Rattus
norvegicus RepID=UPI0000503D79
Length = 1133
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R + IGRMP+M RSS CVL K AE A+ L DPGG + K EKVILIQEQLS
Sbjct: 128 RNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPL-DPGGYFI-VKGVEKVILIQEQLS 185
Query: 250 KQQ 258
K +
Sbjct: 186 KNR 188
[64][TOP]
>UniRef100_UPI00005EAC23 PREDICTED: similar to Polymerase (RNA) III (DNA directed)
polypeptide B n=1 Tax=Monodelphis domestica
RepID=UPI00005EAC23
Length = 1133
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R + IGRMP+M RSS CVL K AE A+ L DPGG + K EKVILIQEQLS
Sbjct: 128 RNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPL-DPGGYFI-VKGVEKVILIQEQLS 185
Query: 250 KQQ 258
K +
Sbjct: 186 KNR 188
[65][TOP]
>UniRef100_UPI00006A103B DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA
polymerase III subunit C2) (DNA-directed RNA polymerase
III subunit B) (DNA-directed RNA polymerase III 127.6
kDa polypeptide) (C128). n=1 Tax=Xenopus (Silurana)
tropicalis RepID=UPI00006A103B
Length = 1122
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R + IGRMP+M RSS CVL K AE A+ L DPGG + K EKVILIQEQLS
Sbjct: 128 RNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPL-DPGGYFI-VKGVEKVILIQEQLS 185
Query: 250 KQQ 258
K +
Sbjct: 186 KNR 188
[66][TOP]
>UniRef100_UPI00004DA04E DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA
polymerase III subunit C2) (DNA-directed RNA polymerase
III subunit B) (DNA-directed RNA polymerase III 127.6
kDa polypeptide) (C128). n=1 Tax=Xenopus (Silurana)
tropicalis RepID=UPI00004DA04E
Length = 1136
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R + IGRMP+M RSS CVL K AE A+ L DPGG + K EKVILIQEQLS
Sbjct: 128 RNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPL-DPGGYFI-VKGVEKVILIQEQLS 185
Query: 250 KQQ 258
K +
Sbjct: 186 KNR 188
[67][TOP]
>UniRef100_UPI00005A223E PREDICTED: similar to DNA-directed RNA polymerase III subunit 127.6
kDa polypeptide (RNA polymerase III subunit 2) (RPC2)
n=1 Tax=Canis lupus familiaris RepID=UPI00005A223E
Length = 1133
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R + IGRMP+M RSS CVL K AE A+ L DPGG + K EKVILIQEQLS
Sbjct: 128 RNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPL-DPGGYFI-VKGVEKVILIQEQLS 185
Query: 250 KQQ 258
K +
Sbjct: 186 KNR 188
[68][TOP]
>UniRef100_UPI0000F339C2 PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2
(RNA polymerase III subunit C2) (DNA-directed RNA
polymerase III subunit B) (DNA-directed RNA polymerase
III 127.6 kDa polypeptide) (C128) n=1 Tax=Bos taurus
RepID=UPI0000F339C2
Length = 1133
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R + IGRMP+M RSS CVL K AE A+ L DPGG + K EKVILIQEQLS
Sbjct: 128 RNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPL-DPGGYFI-VKGVEKVILIQEQLS 185
Query: 250 KQQ 258
K +
Sbjct: 186 KNR 188
[69][TOP]
>UniRef100_UPI0000ECD29F DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA
polymerase III subunit C2) (DNA-directed RNA polymerase
III subunit B) (DNA-directed RNA polymerase III 127.6
kDa polypeptide) (C128). n=1 Tax=Gallus gallus
RepID=UPI0000ECD29F
Length = 1132
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R + IGRMP+M RSS CVL K AE A+ L DPGG + K EKVILIQEQLS
Sbjct: 128 RNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPL-DPGGYFI-VKGVEKVILIQEQLS 185
Query: 250 KQQ 258
K +
Sbjct: 186 KNR 188
[70][TOP]
>UniRef100_B2GUR3 DNA-directed RNA polymerase n=1 Tax=Xenopus (Silurana) tropicalis
RepID=B2GUR3_XENTR
Length = 1134
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R + IGRMP+M RSS CVL K AE A+ L DPGG + K EKVILIQEQLS
Sbjct: 128 RNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPL-DPGGYFI-VKGVEKVILIQEQLS 185
Query: 250 KQQ 258
K +
Sbjct: 186 KNR 188
[71][TOP]
>UniRef100_Q3TMK3 Putative uncharacterized protein n=1 Tax=Mus musculus
RepID=Q3TMK3_MOUSE
Length = 369
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R + IGRMP+M RSS CVL K AE A+ L DPGG + K EKVILIQEQLS
Sbjct: 128 RNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPL-DPGGYFI-VKGVEKVILIQEQLS 185
Query: 250 KQQ 258
K +
Sbjct: 186 KNR 188
[72][TOP]
>UniRef100_B6VBN7 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis brenneri
RepID=B6VBN7_CAEBE
Length = 1152
Score = 53.5 bits (127), Expect = 7e-06
Identities = 30/63 (47%), Positives = 43/63 (68%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
+++++IGRMP+M RSS+C+L + + LA DPGG + K +EKVILIQEQLS
Sbjct: 130 KKDLIIGRMPIMLRSSKCILRDLAEEGLARVQ-ECPYDPGGYFV-VKGSEKVILIQEQLS 187
Query: 250 KQQ 258
K +
Sbjct: 188 KNR 190
[73][TOP]
>UniRef100_Q7Z3R8 DNA-directed RNA polymerase n=2 Tax=Homininae RepID=Q7Z3R8_HUMAN
Length = 1133
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R + IGRMP+M RSS CVL K AE A+ L DPGG + K EKVILIQEQLS
Sbjct: 128 RNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPL-DPGGYFI-VKGVEKVILIQEQLS 185
Query: 250 KQQ 258
K +
Sbjct: 186 KNR 188
[74][TOP]
>UniRef100_B3KV73 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B3KV73_HUMAN
Length = 1075
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R + IGRMP+M RSS CVL K AE A+ L DPGG + K EKVILIQEQLS
Sbjct: 70 RNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPL-DPGGYFI-VKGVEKVILIQEQLS 127
Query: 250 KQQ 258
K +
Sbjct: 128 KNR 130
[75][TOP]
>UniRef100_Q6FLJ9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
RepID=Q6FLJ9_CANGA
Length = 1133
Score = 53.5 bits (127), Expect = 7e-06
Identities = 30/62 (48%), Positives = 41/62 (66%)
Frame = +1
Query: 73 QNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLSK 252
+NV IGRMP+M RS++C+L+ D+ +A L DPGG + EKVIL+QEQLSK
Sbjct: 133 KNVEIGRMPIMLRSNKCILHGADEKMMARLSECPL-DPGGYFI-VNGTEKVILVQEQLSK 190
Query: 253 QQ 258
+
Sbjct: 191 NR 192
[76][TOP]
>UniRef100_Q1DTS7 DNA-directed RNA polymerase n=2 Tax=Coccidioides RepID=Q1DTS7_COCIM
Length = 1233
Score = 53.5 bits (127), Expect = 7e-06
Identities = 32/68 (47%), Positives = 42/68 (61%)
Frame = +1
Query: 55 KEQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILI 234
+++ +R IGRMPVM RSS+CVL +K E+ L DPGG + EKVIL+
Sbjct: 211 RQRVKRNGTAIGRMPVMLRSSKCVLSKKSPREMYLLHECPL-DPGGYFI-VNGTEKVILV 268
Query: 235 QEQLSKQQ 258
QEQLSK +
Sbjct: 269 QEQLSKNR 276
[77][TOP]
>UniRef100_B2W234 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2W234_PYRTR
Length = 1167
Score = 53.5 bits (127), Expect = 7e-06
Identities = 29/64 (45%), Positives = 44/64 (68%)
Frame = +1
Query: 67 QRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQL 246
+R + IGRMP+M +S++CVL K+D ++A L DPGG + ++ EKVIL+QEQL
Sbjct: 204 KRTGIKIGRMPIMLKSNKCVLAGKNDNDMAVMGECPL-DPGGYFI-TRGQEKVILVQEQL 261
Query: 247 SKQQ 258
+K +
Sbjct: 262 NKNR 265
[78][TOP]
>UniRef100_A4R1B6 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
RepID=A4R1B6_MAGGR
Length = 1158
Score = 53.5 bits (127), Expect = 7e-06
Identities = 32/68 (47%), Positives = 43/68 (63%)
Frame = +1
Query: 55 KEQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILI 234
K++ R+NV +GRMP+M +SS C L ++AE+ E DPGG + EKVILI
Sbjct: 131 KKKVLRKNVTLGRMPIMLKSSNCWLSGANNAEM-EDMNECPLDPGGYFI-INGTEKVILI 188
Query: 235 QEQLSKQQ 258
QEQLSK +
Sbjct: 189 QEQLSKNR 196
[79][TOP]
>UniRef100_P59470 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Mus musculus
RepID=RPC2_MOUSE
Length = 1133
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R + IGRMP+M RSS CVL K AE A+ L DPGG + K EKVILIQEQLS
Sbjct: 128 RNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPL-DPGGYFI-VKGVEKVILIQEQLS 185
Query: 250 KQQ 258
K +
Sbjct: 186 KNR 188
[80][TOP]
>UniRef100_Q9NW08 DNA-directed RNA polymerase III subunit RPC2 n=2 Tax=Homo sapiens
RepID=RPC2_HUMAN
Length = 1133
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R + IGRMP+M RSS CVL K AE A+ L DPGG + K EKVILIQEQLS
Sbjct: 128 RNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPL-DPGGYFI-VKGVEKVILIQEQLS 185
Query: 250 KQQ 258
K +
Sbjct: 186 KNR 188
[81][TOP]
>UniRef100_UPI000180BF5A PREDICTED: similar to polymerase (RNA) III (DNA directed)
polypeptide B n=1 Tax=Ciona intestinalis
RepID=UPI000180BF5A
Length = 1141
Score = 53.1 bits (126), Expect = 9e-06
Identities = 33/63 (52%), Positives = 41/63 (65%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R+ + IGRMP+M RSS CVL K+ ELA+ DPGG + K EKVILIQEQ+S
Sbjct: 129 RKALPIGRMPIMLRSSNCVLTGKNGVELAK-MNECPYDPGGYFV-CKGVEKVILIQEQMS 186
Query: 250 KQQ 258
K +
Sbjct: 187 KNR 189
[82][TOP]
>UniRef100_Q7Q416 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7Q416_ANOGA
Length = 1089
Score = 53.1 bits (126), Expect = 9e-06
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R ++IGRMP+M RSS CVL K D +L++ DPGG + + EKVILIQEQLS
Sbjct: 122 RNGLLIGRMPIMLRSSNCVLTGKSDYQLSKV-NECPMDPGGYFI-IRGTEKVILIQEQLS 179
[83][TOP]
>UniRef100_B6AC47 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
RepID=B6AC47_9CRYT
Length = 1219
Score = 53.1 bits (126), Expect = 9e-06
Identities = 31/64 (48%), Positives = 40/64 (62%)
Frame = +1
Query: 67 QRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQL 246
+++NV IGR+PVM RS C+LY K E+ DPGG + K EKVIL+QEQL
Sbjct: 145 RKKNVEIGRIPVMLRSKVCILYGKTPLEMINL-SECPHDPGGYFV-VKGTEKVILMQEQL 202
Query: 247 SKQQ 258
SK +
Sbjct: 203 SKNR 206
[84][TOP]
>UniRef100_Q2URF4 DNA-directed RNA polymerase n=1 Tax=Aspergillus oryzae
RepID=Q2URF4_ASPOR
Length = 1180
Score = 53.1 bits (126), Expect = 9e-06
Identities = 32/68 (47%), Positives = 43/68 (63%)
Frame = +1
Query: 55 KEQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILI 234
+++ ++ IGRMPVM RSS+CVL +K AE+ L DPGG + EKVIL+
Sbjct: 160 RQRVKKTGCSIGRMPVMLRSSKCVLSDKTPAEMTVLDECPL-DPGGYFI-VNGTEKVILV 217
Query: 235 QEQLSKQQ 258
QEQLSK +
Sbjct: 218 QEQLSKNR 225
[85][TOP]
>UniRef100_B8MYG2 DNA-directed RNA polymerase n=1 Tax=Aspergillus flavus NRRL3357
RepID=B8MYG2_ASPFN
Length = 1218
Score = 53.1 bits (126), Expect = 9e-06
Identities = 32/68 (47%), Positives = 43/68 (63%)
Frame = +1
Query: 55 KEQKQRQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILI 234
+++ ++ IGRMPVM RSS+CVL +K AE+ L DPGG + EKVIL+
Sbjct: 198 RQRVKKTGCSIGRMPVMLRSSKCVLSDKTPAEMTVLDECPL-DPGGYFI-VNGTEKVILV 255
Query: 235 QEQLSKQQ 258
QEQLSK +
Sbjct: 256 QEQLSKNR 263
[86][TOP]
>UniRef100_A1CS37 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
RepID=A1CS37_ASPCL
Length = 1246
Score = 53.1 bits (126), Expect = 9e-06
Identities = 32/63 (50%), Positives = 40/63 (63%)
Frame = +1
Query: 70 RQNVVIGRMPVMWRSSRCVLYEKDDAELAETWCSALSDPGGSIL*SKANEKVILIQEQLS 249
R+ V IGRMP+M RSS+CVL K +E+ L DPGG + EKVIL+QEQLS
Sbjct: 233 RRGVSIGRMPIMLRSSKCVLANKTPSEMTVLNECPL-DPGGYFI-VNGTEKVILVQEQLS 290
Query: 250 KQQ 258
K +
Sbjct: 291 KNR 293