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[1][TOP]
>UniRef100_B9RP51 RNA-dependent RNA polymerase, putative n=1 Tax=Ricinus communis
RepID=B9RP51_RICCO
Length = 1203
Score = 148 bits (373), Expect = 3e-34
Identities = 67/110 (60%), Positives = 86/110 (78%)
Frame = +1
Query: 196 MDLGGSEKESVVTQVSIGGXDSEVKAHDLAEFLENRIGLVYRCRLKTSWTPPESYPEFNV 375
M+ EKE+VVTQVS GG D +V A DL +L+N IG V+RCRLKTSWTPPESYP F +
Sbjct: 1 METKRREKETVVTQVSFGGFDKDVTARDLVAYLDNEIGQVWRCRLKTSWTPPESYPNFEI 60
Query: 376 ADTALVKRTDDYKKVEPHAFVHFALPESATEALDASGSCDLMWEGKPLKV 525
DTA+++R D Y++VEPHAFVHFA P+SAT A +A+G C+L + G+P+KV
Sbjct: 61 TDTAVIQRVDAYRRVEPHAFVHFASPDSATWAKNAAGHCELFFNGRPVKV 110
[2][TOP]
>UniRef100_B9IKW9 Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa
RepID=B9IKW9_POPTR
Length = 1200
Score = 148 bits (373), Expect = 3e-34
Identities = 69/110 (62%), Positives = 85/110 (77%)
Frame = +1
Query: 196 MDLGGSEKESVVTQVSIGGXDSEVKAHDLAEFLENRIGLVYRCRLKTSWTPPESYPEFNV 375
M+ GS KE+VVTQVS+GG D V A DL E+L+ IGLV+RCRLKTSWTPPESYP F +
Sbjct: 1 MEAEGSAKETVVTQVSVGGFDIHVTAKDLLEYLDRAIGLVWRCRLKTSWTPPESYPNFEI 60
Query: 376 ADTALVKRTDDYKKVEPHAFVHFALPESATEALDASGSCDLMWEGKPLKV 525
D ++RT+DY++V PHAFVHFALP+SAT A++ASG C+L K LKV
Sbjct: 61 TDITKIERTEDYRRVVPHAFVHFALPQSATLAMNASGRCELFLNNKALKV 110
[3][TOP]
>UniRef100_B9HA49 Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa
RepID=B9HA49_POPTR
Length = 1198
Score = 147 bits (370), Expect = 6e-34
Identities = 69/109 (63%), Positives = 83/109 (76%)
Frame = +1
Query: 196 MDLGGSEKESVVTQVSIGGXDSEVKAHDLAEFLENRIGLVYRCRLKTSWTPPESYPEFNV 375
M+ GS KE+VVTQVS+GG D V A DL E+LE IGLV+RCRLKTSWTPPESYP F +
Sbjct: 1 METEGSAKETVVTQVSLGGFDIHVTAKDLLEYLEREIGLVWRCRLKTSWTPPESYPNFEI 60
Query: 376 ADTALVKRTDDYKKVEPHAFVHFALPESATEALDASGSCDLMWEGKPLK 522
D + RT+DY++VEPHAFVHFALP+SAT A+DA+ C+L K LK
Sbjct: 61 TDITKITRTEDYRRVEPHAFVHFALPQSATCAIDAADRCELFLNNKGLK 109
[4][TOP]
>UniRef100_A7P5T3 Chromosome chr4 scaffold_6, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7P5T3_VITVI
Length = 1197
Score = 144 bits (364), Expect = 3e-33
Identities = 71/110 (64%), Positives = 85/110 (77%)
Frame = +1
Query: 196 MDLGGSEKESVVTQVSIGGXDSEVKAHDLAEFLENRIGLVYRCRLKTSWTPPESYPEFNV 375
M+ GSEK+ VVTQ+SIGG D V A +L +LE+ IG V RCRLKTS TPPESYP+F +
Sbjct: 1 MESEGSEKDMVVTQISIGGFDQYVTATELTYYLEDTIGSVDRCRLKTSSTPPESYPDFEI 60
Query: 376 ADTALVKRTDDYKKVEPHAFVHFALPESATEALDASGSCDLMWEGKPLKV 525
DTA ++RT+DYKKVEPHAFVHF PE+AT ALDA+G +L GKPLKV
Sbjct: 61 IDTAKIERTEDYKKVEPHAFVHFVSPEAATWALDAAGKSELFLHGKPLKV 110
[5][TOP]
>UniRef100_Q9SG02 Putative RNA-directed RNA polymerase; 73997-69985 n=1
Tax=Arabidopsis thaliana RepID=Q9SG02_ARATH
Length = 1196
Score = 140 bits (352), Expect = 7e-32
Identities = 64/106 (60%), Positives = 83/106 (78%)
Frame = +1
Query: 208 GSEKESVVTQVSIGGXDSEVKAHDLAEFLENRIGLVYRCRLKTSWTPPESYPEFNVADTA 387
G+ K+SVVTQVSIGG A L ++LE+ +G+V+RCRLKTSWTPP SYP F +ADT+
Sbjct: 5 GNMKKSVVTQVSIGGFGESTTAKQLTDYLEDEVGIVWRCRLKTSWTPPGSYPNFEIADTS 64
Query: 388 LVKRTDDYKKVEPHAFVHFALPESATEALDASGSCDLMWEGKPLKV 525
+ D+YKKVEPHAFVHFA+ ESA A+DA+G C+L+ +G+PLKV
Sbjct: 65 NIPSIDEYKKVEPHAFVHFAVFESAGRAMDAAGQCNLILDGQPLKV 110
[6][TOP]
>UniRef100_Q9LKP0 RNA-dependent RNA polymerase n=1 Tax=Arabidopsis thaliana
RepID=Q9LKP0_ARATH
Length = 1196
Score = 140 bits (352), Expect = 7e-32
Identities = 64/106 (60%), Positives = 83/106 (78%)
Frame = +1
Query: 208 GSEKESVVTQVSIGGXDSEVKAHDLAEFLENRIGLVYRCRLKTSWTPPESYPEFNVADTA 387
G+ K+SVVTQVSIGG A L ++LE+ +G+V+RCRLKTSWTPP SYP F +ADT+
Sbjct: 5 GNMKKSVVTQVSIGGFGESTTAKQLTDYLEDEVGIVWRCRLKTSWTPPGSYPNFEIADTS 64
Query: 388 LVKRTDDYKKVEPHAFVHFALPESATEALDASGSCDLMWEGKPLKV 525
+ D+YKKVEPHAFVHFA+ ESA A+DA+G C+L+ +G+PLKV
Sbjct: 65 NIPSIDEYKKVEPHAFVHFAVFESAGRAMDAAGQCNLILDGQPLKV 110
[7][TOP]
>UniRef100_B3TNC1 RNA-dependent RNA polymerase n=1 Tax=Nicotiana attenuata
RepID=B3TNC1_9SOLA
Length = 1197
Score = 117 bits (293), Expect = 5e-25
Identities = 61/106 (57%), Positives = 78/106 (73%)
Frame = +1
Query: 208 GSEKESVVTQVSIGGXDSEVKAHDLAEFLENRIGLVYRCRLKTSWTPPESYPEFNVADTA 387
GSEK+ VVTQ+S+GG D++V A L+E+LE ++G V+RCRLK S TPP+SYP F+V D
Sbjct: 5 GSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTFDV-DAE 63
Query: 388 LVKRTDDYKKVEPHAFVHFALPESATEALDASGSCDLMWEGKPLKV 525
V+R DY+KV PHAFVHFA ESA AL A+G +L+ KPL V
Sbjct: 64 RVQRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIV 109
[8][TOP]
>UniRef100_C5XM68 Putative uncharacterized protein Sb03g022880 n=1 Tax=Sorghum
bicolor RepID=C5XM68_SORBI
Length = 1207
Score = 117 bits (292), Expect = 7e-25
Identities = 57/103 (55%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Frame = +1
Query: 226 VVTQVSIGGXDSEVKAHDLAEFLENRIGLVYRCRLKTSWTPPESYPEFNVAD-TALVKRT 402
V TQVS+GG D+ VKA DLA+FLE + GLV+RCR+KTSWTPP++YP+F + T+ +
Sbjct: 20 VTTQVSLGGFDATVKALDLADFLELKAGLVWRCRVKTSWTPPDAYPDFLLPTVTSAAAQP 79
Query: 403 DDYKKVEPHAFVHFALPESATEALDASGSCDLMWEGKPLKVIS 531
Y +V PHAFVHFA PE A A DA+G +L+ GKPL+ S
Sbjct: 80 PQYDRVPPHAFVHFARPEGARAAADAAGRSELILSGKPLRAAS 122
[9][TOP]
>UniRef100_Q647I5 Putative RNA-dependent RNA polymerase SDE1 n=1 Tax=Nicotiana
benthamiana RepID=Q647I5_NICBE
Length = 1197
Score = 115 bits (288), Expect = 2e-24
Identities = 61/106 (57%), Positives = 77/106 (72%)
Frame = +1
Query: 208 GSEKESVVTQVSIGGXDSEVKAHDLAEFLENRIGLVYRCRLKTSWTPPESYPEFNVADTA 387
GSEK+ VVTQ+S+GG D++V A L+E+LE ++G V+RCRLK S TPP+SYP ++V D A
Sbjct: 5 GSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISATPPDSYPTYDV-DAA 63
Query: 388 LVKRTDDYKKVEPHAFVHFALPESATEALDASGSCDLMWEGKPLKV 525
V R DY+KV PHAFVHFA ESA AL A+G L+ KPL V
Sbjct: 64 RVHRMKDYEKVVPHAFVHFASSESAKYALAAAGGNGLILGKKPLIV 109
[10][TOP]
>UniRef100_B5BLP6 RNA-dependent RNA polymerase 6 n=1 Tax=Nicotiana tabacum
RepID=B5BLP6_TOBAC
Length = 1197
Score = 115 bits (287), Expect = 3e-24
Identities = 59/106 (55%), Positives = 77/106 (72%)
Frame = +1
Query: 208 GSEKESVVTQVSIGGXDSEVKAHDLAEFLENRIGLVYRCRLKTSWTPPESYPEFNVADTA 387
GSEK+ VVTQ+S+GG D++V A L+E+LE ++G V+RCRLK S TPP+SYP +++ D
Sbjct: 5 GSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISATPPDSYPTYDI-DAE 63
Query: 388 LVKRTDDYKKVEPHAFVHFALPESATEALDASGSCDLMWEGKPLKV 525
V R DY+KV PHAFVHFA ESA AL A+G +L+ KPL V
Sbjct: 64 RVHRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIV 109
[11][TOP]
>UniRef100_Q8LHH9 Probable RNA-dependent RNA polymerase SHL2 n=1 Tax=Oryza sativa
Japonica Group RepID=SHL2_ORYSJ
Length = 1218
Score = 115 bits (287), Expect = 3e-24
Identities = 57/106 (53%), Positives = 72/106 (67%), Gaps = 4/106 (3%)
Frame = +1
Query: 226 VVTQVSIGGXDSEVKAHDLAEFLENRIGLVYRCRLKTSWTPPESYPEFNV----ADTALV 393
V TQVS+GG D+ V A DLA+FLE+ +GLV+RCR+KTSWTPP+SYP+F + A +
Sbjct: 28 VTTQVSLGGFDAGVAAGDLADFLEHEVGLVWRCRVKTSWTPPDSYPDFALPTAPASASAA 87
Query: 394 KRTDDYKKVEPHAFVHFALPESATEALDASGSCDLMWEGKPLKVIS 531
Y +V PHAFVHFA PE A A D +G L+ GKPL+V S
Sbjct: 88 AAPPRYDRVPPHAFVHFARPEGARRAADLAGETRLILRGKPLRVAS 133
[12][TOP]
>UniRef100_A9CRC9 RNA-dependent RNA polymerase 6 n=1 Tax=Nicotiana tabacum
RepID=A9CRC9_TOBAC
Length = 1197
Score = 113 bits (282), Expect = 1e-23
Identities = 59/106 (55%), Positives = 78/106 (73%)
Frame = +1
Query: 208 GSEKESVVTQVSIGGXDSEVKAHDLAEFLENRIGLVYRCRLKTSWTPPESYPEFNVADTA 387
GSEKE VVTQ+S GG D++V A L+E+LE ++G V+RCRLK S TPP+SYP +++ D
Sbjct: 5 GSEKELVVTQISGGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTYDI-DAE 63
Query: 388 LVKRTDDYKKVEPHAFVHFALPESATEALDASGSCDLMWEGKPLKV 525
V+R ++Y+KV PHAFVHFA ESA AL A+G +L+ KPL V
Sbjct: 64 KVQRMNNYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIV 109
[13][TOP]
>UniRef100_Q8GUU1 Putative uncharacterized protein F16J10.8 n=1 Tax=Arabidopsis
thaliana RepID=Q8GUU1_ARATH
Length = 143
Score = 96.3 bits (238), Expect = 1e-18
Identities = 49/110 (44%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Frame = +1
Query: 196 MDLGGSEKESVVTQVSIGGXDSEVKAHDLAEFLENRIGL-VYRCRLKTSWTPPESYPEFN 372
M+ G+ K VV+QV+I G K +L ++LEN++GL V+RCRLKTSWTP SYP F
Sbjct: 1 MESEGNMKNLVVSQVTISGFGESTKTKELTDYLENKVGLLVWRCRLKTSWTPHGSYPNFE 60
Query: 373 VADTALVKRTDDYKKVEPHAFVHFALPESATEALDASGSCDLMWEGKPLK 522
+ DT+ + + D Y++V PHAFVH ++ +DA+ L+ G+PLK
Sbjct: 61 IIDTSNIPKFDCYERVVPHAFVHC---DAHKSLMDAAEQXKLILGGQPLK 107
[14][TOP]
>UniRef100_Q58G28 Putative uncharacterized protein n=1 Tax=Arabidopsis thaliana
RepID=Q58G28_ARATH
Length = 143
Score = 96.3 bits (238), Expect = 1e-18
Identities = 49/110 (44%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Frame = +1
Query: 196 MDLGGSEKESVVTQVSIGGXDSEVKAHDLAEFLENRIGL-VYRCRLKTSWTPPESYPEFN 372
M+ G+ K VV+QV+I G K +L ++LEN++GL V+RCRLKTSWTP SYP F
Sbjct: 1 MESEGNMKNLVVSQVTISGFGESTKTKELTDYLENKVGLLVWRCRLKTSWTPHGSYPNFE 60
Query: 373 VADTALVKRTDDYKKVEPHAFVHFALPESATEALDASGSCDLMWEGKPLK 522
+ DT+ + + D Y++V PHAFVH ++ +DA+ L+ G+PLK
Sbjct: 61 IIDTSNIPKFDCYERVVPHAFVHC---DAHKSLMDAAEQSKLILGGQPLK 107
[15][TOP]
>UniRef100_Q9SHT7 Putative uncharacterized protein At2g05370 n=1 Tax=Arabidopsis
thaliana RepID=Q9SHT7_ARATH
Length = 211
Score = 93.2 bits (230), Expect = 1e-17
Identities = 47/103 (45%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
Frame = +1
Query: 217 KESVVTQVSIGGXDSEVKAHDLAEFLENRIGL-VYRCRLKTSWTPPESYPEFNVADTALV 393
K VV+QV+I G K +L ++LEN++GL V+RCRLKTSWTP SYP F + DT+ +
Sbjct: 2 KNLVVSQVTISGFGESTKTKELTDYLENKVGLLVWRCRLKTSWTPHGSYPNFEIIDTSNI 61
Query: 394 KRTDDYKKVEPHAFVHFALPESATEALDASGSCDLMWEGKPLK 522
+ D Y++V PHAFVH ++ +DA+ L+ G+PLK
Sbjct: 62 PKFDCYERVVPHAFVHC---DAHKSLMDAAEQSKLILGGQPLK 101
[16][TOP]
>UniRef100_B9EXA5 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9EXA5_ORYSJ
Length = 1571
Score = 77.0 bits (188), Expect = 8e-13
Identities = 33/48 (68%), Positives = 42/48 (87%)
Frame = +1
Query: 226 VVTQVSIGGXDSEVKAHDLAEFLENRIGLVYRCRLKTSWTPPESYPEF 369
V TQVS+GG D+ V A DLA+FLE+ +GLV+RCR+KTSWTPP+SYP+F
Sbjct: 28 VTTQVSLGGFDAGVAAGDLADFLEHEVGLVWRCRVKTSWTPPDSYPDF 75
[17][TOP]
>UniRef100_C5Z766 Putative uncharacterized protein Sb10g025970 n=1 Tax=Sorghum
bicolor RepID=C5Z766_SORBI
Length = 1251
Score = 69.3 bits (168), Expect = 2e-10
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 10/90 (11%)
Frame = +1
Query: 232 TQVSIGGXDSEVKAHDLAEFLENRIGLVYRCRLKTSWTPPESYPEFNVA-------DTAL 390
T+V + G D+ + A LA+ LE+ G V+RCR+KTS TPPESYP+F + D A+
Sbjct: 66 TRVVLTGFDAGLSARGLADDLEHLAGTVWRCRVKTSVTPPESYPDFQLPVHPADDDDAAV 125
Query: 391 VKRTDDYKK---VEPHAFVHFALPESATEA 471
D+ + V PHAFVHF P +A A
Sbjct: 126 FHHQDEPSRHGVVAPHAFVHFEHPNAADRA 155
[18][TOP]
>UniRef100_C5YIV2 Putative uncharacterized protein Sb07g006150 n=1 Tax=Sorghum
bicolor RepID=C5YIV2_SORBI
Length = 1220
Score = 68.6 bits (166), Expect = 3e-10
Identities = 45/119 (37%), Positives = 58/119 (48%), Gaps = 32/119 (26%)
Frame = +1
Query: 211 SEKESVVTQVSIGGXDSEVKA-HDLAEFLENRIGLVYRCRLKTSWTPPESYPEF------ 369
S E V T+VS+GG DS + +LA++LE G V+RCR+KTS TPP SYP+F
Sbjct: 4 SPAEPVTTRVSVGGFDSRFTSPRELADYLEAVAGRVWRCRVKTSCTPPNSYPDFQCLPLL 63
Query: 370 ----------NVADTALVKRTDD---------------YKKVEPHAFVHFALPESATEA 471
+ + A +R D Y V PHAFVHF PE+A A
Sbjct: 64 PAANAHQPPPHYSSRARRRRAPDGEDDGALAFQAAPTPYNLVPPHAFVHFVHPEAARRA 122
[19][TOP]
>UniRef100_C5Z764 Putative uncharacterized protein Sb10g025950 n=1 Tax=Sorghum
bicolor RepID=C5Z764_SORBI
Length = 1239
Score = 64.3 bits (155), Expect = 5e-09
Identities = 37/89 (41%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Frame = +1
Query: 226 VVTQVSIGGXDSEVKAHDLAEFLENRIGLVYRCRLKTSWTPPESYPEFNVAD--TALVKR 399
+ T+ + G D+ + A LA+ LE+ G V+RCR+KTS TPP+SYP+F++ A V
Sbjct: 58 LATRAILTGFDAGLSARGLADDLEHVAGTVWRCRVKTSITPPKSYPDFHLPAILAAAVLH 117
Query: 400 TDD---YKKVEPHAFVHFALPESATEALD 477
D + +V PHAFVHF ++A A D
Sbjct: 118 PDGPSRHGRVAPHAFVHFEQLKAANHAGD 146