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[1][TOP]
>UniRef100_B9HFY1 Putative uncharacterized protein RDR908 n=1 Tax=Populus trichocarpa
RepID=B9HFY1_POPTR
Length = 406
Score = 141 bits (356), Expect = 3e-32
Identities = 62/96 (64%), Positives = 84/96 (87%)
Frame = -1
Query: 535 GRLKANEVCIIHENGQITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPC 356
G L+++EVCII + GQ++G+VLVYRNPGLHFGDIHI+ A YV ELE +VG++KYAIFFPC
Sbjct: 311 GLLESDEVCIILDCGQVSGEVLVYRNPGLHFGDIHILKATYVRELEDFVGNAKYAIFFPC 370
Query: 355 VGPRSIADEIAGGDFDGDLYWVSKHPQVSISILVQK 248
GPRS+ADE++GGDFDGD+++VS++P+VS+ V +
Sbjct: 371 KGPRSLADEMSGGDFDGDMFFVSRNPRVSVIFSVSR 406
[2][TOP]
>UniRef100_B9P5T9 Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa
RepID=B9P5T9_POPTR
Length = 320
Score = 138 bits (348), Expect = 2e-31
Identities = 60/88 (68%), Positives = 80/88 (90%)
Frame = -1
Query: 535 GRLKANEVCIIHENGQITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPC 356
G L+++EVCII + GQI+G+VL+YRNPGLHFGDIHI+ A YV ELE +VG++KYAIFFPC
Sbjct: 87 GLLESDEVCIILDCGQISGEVLIYRNPGLHFGDIHILKATYVRELEDFVGNAKYAIFFPC 146
Query: 355 VGPRSIADEIAGGDFDGDLYWVSKHPQV 272
GPRS+ADE++GGDFDGD+++VS++PQ+
Sbjct: 147 KGPRSLADEMSGGDFDGDMFFVSRNPQL 174
[3][TOP]
>UniRef100_UPI000034ED42 RNA-dependent RNA polymerase family protein n=1 Tax=Arabidopsis
thaliana RepID=UPI000034ED42
Length = 977
Score = 137 bits (345), Expect = 5e-31
Identities = 60/88 (68%), Positives = 78/88 (88%)
Frame = -1
Query: 535 GRLKANEVCIIHENGQITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPC 356
G LK +EVC+I E+GQI+G+VLVYRNPGLHFGDIHI+ A YV+ LE YVG+SK+A+FFP
Sbjct: 609 GALKEDEVCVILESGQISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQ 668
Query: 355 VGPRSIADEIAGGDFDGDLYWVSKHPQV 272
GPRS+ DEIAGGDFDGD+Y++S++P++
Sbjct: 669 KGPRSLGDEIAGGDFDGDMYFISRNPEL 696
[4][TOP]
>UniRef100_O82188 Putative uncharacterized protein At2g19930 n=1 Tax=Arabidopsis
thaliana RepID=O82188_ARATH
Length = 929
Score = 137 bits (345), Expect = 5e-31
Identities = 60/88 (68%), Positives = 78/88 (88%)
Frame = -1
Query: 535 GRLKANEVCIIHENGQITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPC 356
G LK +EVC+I E+GQI+G+VLVYRNPGLHFGDIHI+ A YV+ LE YVG+SK+A+FFP
Sbjct: 529 GALKEDEVCVILESGQISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQ 588
Query: 355 VGPRSIADEIAGGDFDGDLYWVSKHPQV 272
GPRS+ DEIAGGDFDGD+Y++S++P++
Sbjct: 589 KGPRSLGDEIAGGDFDGDMYFISRNPEL 616
[5][TOP]
>UniRef100_UPI000034ED40 RNA-dependent RNA polymerase family protein n=1 Tax=Arabidopsis
thaliana RepID=UPI000034ED40
Length = 992
Score = 137 bits (344), Expect = 6e-31
Identities = 58/88 (65%), Positives = 77/88 (87%)
Frame = -1
Query: 535 GRLKANEVCIIHENGQITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPC 356
G LK NE+C+I +GQI+GDVLVYRNPGLHFGDIH++ A YV+ LE YVG++K+A+FFP
Sbjct: 620 GELKENEICVILHSGQISGDVLVYRNPGLHFGDIHVLKATYVKALEDYVGNAKFAVFFPQ 679
Query: 355 VGPRSIADEIAGGDFDGDLYWVSKHPQV 272
GPRS+ DEIAGGDFDGD+Y++S++P++
Sbjct: 680 KGPRSLGDEIAGGDFDGDMYFISRNPKL 707
[6][TOP]
>UniRef100_O82190 Putative uncharacterized protein At2g19910 n=1 Tax=Arabidopsis
thaliana RepID=O82190_ARATH
Length = 966
Score = 137 bits (344), Expect = 6e-31
Identities = 58/88 (65%), Positives = 77/88 (87%)
Frame = -1
Query: 535 GRLKANEVCIIHENGQITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPC 356
G LK NE+C+I +GQI+GDVLVYRNPGLHFGDIH++ A YV+ LE YVG++K+A+FFP
Sbjct: 594 GELKENEICVILHSGQISGDVLVYRNPGLHFGDIHVLKATYVKALEDYVGNAKFAVFFPQ 653
Query: 355 VGPRSIADEIAGGDFDGDLYWVSKHPQV 272
GPRS+ DEIAGGDFDGD+Y++S++P++
Sbjct: 654 KGPRSLGDEIAGGDFDGDMYFISRNPKL 681
[7][TOP]
>UniRef100_C5XLU8 Putative uncharacterized protein Sb03g002800 n=1 Tax=Sorghum bicolor
RepID=C5XLU8_SORBI
Length = 1127
Score = 133 bits (335), Expect = 7e-30
Identities = 59/88 (67%), Positives = 75/88 (85%)
Frame = -1
Query: 535 GRLKANEVCIIHENGQITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPC 356
G LK ++VCII +NGQ++G VLVY++PGLHFGDIHI+ A Y++ LE VG+SKYAIFFP
Sbjct: 751 GTLKRDQVCIILDNGQLSGKVLVYKHPGLHFGDIHILTATYIDGLEKIVGNSKYAIFFPT 810
Query: 355 VGPRSIADEIAGGDFDGDLYWVSKHPQV 272
GPRS+ADE+A DFDGDLYWVS++PQ+
Sbjct: 811 CGPRSLADEMANSDFDGDLYWVSRNPQL 838
[8][TOP]
>UniRef100_B8A6J1 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8A6J1_ORYSI
Length = 1155
Score = 132 bits (333), Expect = 1e-29
Identities = 58/89 (65%), Positives = 75/89 (84%), Gaps = 1/89 (1%)
Frame = -1
Query: 535 GRLKANEVCIIHENGQITGDVLVYRNPGLHFGDIHIMHARYVEELE-SYVGHSKYAIFFP 359
G L+ NEVC+I ENGQ +GDVLVY++PGLHFGDIH++ A Y+ +LE YVG++KYAI FP
Sbjct: 803 GTLRPNEVCVILENGQFSGDVLVYKHPGLHFGDIHVLKATYIRDLEKEYVGYAKYAILFP 862
Query: 358 CVGPRSIADEIAGGDFDGDLYWVSKHPQV 272
GPRS+ADE+A DFDGD+YWVSK+P++
Sbjct: 863 ISGPRSLADEMANSDFDGDIYWVSKNPKL 891
[9][TOP]
>UniRef100_Q5QMN5 Probable RNA-dependent RNA polymerase 3 n=1 Tax=Oryza sativa Japonica
Group RepID=RDR3_ORYSJ
Length = 1153
Score = 132 bits (333), Expect = 1e-29
Identities = 58/89 (65%), Positives = 75/89 (84%), Gaps = 1/89 (1%)
Frame = -1
Query: 535 GRLKANEVCIIHENGQITGDVLVYRNPGLHFGDIHIMHARYVEELE-SYVGHSKYAIFFP 359
G L+ NEVC+I ENGQ +GDVLVY++PGLHFGDIH++ A Y+ +LE YVG++KYAI FP
Sbjct: 783 GTLRPNEVCVILENGQFSGDVLVYKHPGLHFGDIHVLKATYIRDLEKEYVGYAKYAILFP 842
Query: 358 CVGPRSIADEIAGGDFDGDLYWVSKHPQV 272
GPRS+ADE+A DFDGD+YWVSK+P++
Sbjct: 843 ISGPRSLADEMANSDFDGDIYWVSKNPKL 871
[10][TOP]
>UniRef100_UPI00019842AC PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI00019842AC
Length = 943
Score = 131 bits (330), Expect = 3e-29
Identities = 57/88 (64%), Positives = 76/88 (86%)
Frame = -1
Query: 535 GRLKANEVCIIHENGQITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPC 356
G LK++EVCII ++GQ+ G VLVY++PGLHFGDIH+++A YVE LE +VG++KYAIFFP
Sbjct: 574 GTLKSDEVCIILDHGQVQGRVLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPI 633
Query: 355 VGPRSIADEIAGGDFDGDLYWVSKHPQV 272
GPRS+ADE+A DFDGD+YWVS++ Q+
Sbjct: 634 KGPRSLADEMANSDFDGDMYWVSRNQQL 661
[11][TOP]
>UniRef100_A7PEI0 Chromosome chr11 scaffold_13, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PEI0_VITVI
Length = 788
Score = 131 bits (330), Expect = 3e-29
Identities = 57/88 (64%), Positives = 76/88 (86%)
Frame = -1
Query: 535 GRLKANEVCIIHENGQITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPC 356
G LK++EVCII ++GQ+ G VLVY++PGLHFGDIH+++A YVE LE +VG++KYAIFFP
Sbjct: 419 GTLKSDEVCIILDHGQVQGRVLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPI 478
Query: 355 VGPRSIADEIAGGDFDGDLYWVSKHPQV 272
GPRS+ADE+A DFDGD+YWVS++ Q+
Sbjct: 479 KGPRSLADEMANSDFDGDMYWVSRNQQL 506
[12][TOP]
>UniRef100_B9RKI7 RNA-dependent RNA polymerase, putative n=1 Tax=Ricinus communis
RepID=B9RKI7_RICCO
Length = 114
Score = 123 bits (309), Expect = 7e-27
Identities = 54/81 (66%), Positives = 71/81 (87%)
Frame = -1
Query: 499 ENGQITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPCVGPRSIADEIAG 320
+N I+G VLVYRNPGLHFGDIH++ A YV+ LE +VG++KYAIFFPC GP+S+ADEIAG
Sbjct: 24 DNEHISGKVLVYRNPGLHFGDIHVLKATYVKALEDFVGNAKYAIFFPCKGPQSLADEIAG 83
Query: 319 GDFDGDLYWVSKHPQVSISIL 257
GDF+ D+Y+VS++P+VSI +L
Sbjct: 84 GDFNNDMYFVSRNPEVSIFLL 104
[13][TOP]
>UniRef100_B9ETN2 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group
RepID=B9ETN2_ORYSJ
Length = 1148
Score = 117 bits (292), Expect = 7e-25
Identities = 51/88 (57%), Positives = 69/88 (78%)
Frame = -1
Query: 535 GRLKANEVCIIHENGQITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPC 356
G+L NEVC+I + GQ++GDVLVY+ PGLH GDIH++ A Y ++E VG+SK+AI FP
Sbjct: 769 GKLGPNEVCVILDYGQVSGDVLVYKYPGLHPGDIHVLKATYSSDIEKVVGNSKHAILFPT 828
Query: 355 VGPRSIADEIAGGDFDGDLYWVSKHPQV 272
G RS+ADE+A DFDGD+YWVS +P++
Sbjct: 829 TGQRSLADEMANSDFDGDIYWVSLNPKL 856
[14][TOP]
>UniRef100_Q5QMN4 Probable RNA-dependent RNA polymerase 4 n=1 Tax=Oryza sativa Japonica
Group RepID=RDR4_ORYSJ
Length = 1183
Score = 117 bits (292), Expect = 7e-25
Identities = 51/88 (57%), Positives = 69/88 (78%)
Frame = -1
Query: 535 GRLKANEVCIIHENGQITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPC 356
G+L NEVC+I + GQ++GDVLVY+ PGLH GDIH++ A Y ++E VG+SK+AI FP
Sbjct: 804 GKLGPNEVCVILDYGQVSGDVLVYKYPGLHPGDIHVLKATYSSDIEKVVGNSKHAILFPT 863
Query: 355 VGPRSIADEIAGGDFDGDLYWVSKHPQV 272
G RS+ADE+A DFDGD+YWVS +P++
Sbjct: 864 TGQRSLADEMANSDFDGDIYWVSLNPKL 891
[15][TOP]
>UniRef100_UPI000034ED41 RNA-dependent RNA polymerase family protein n=1 Tax=Arabidopsis
thaliana RepID=UPI000034ED41
Length = 927
Score = 115 bits (289), Expect = 2e-24
Identities = 54/88 (61%), Positives = 70/88 (79%)
Frame = -1
Query: 535 GRLKANEVCIIHENGQITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPC 356
G LK +EV + ++ DVLVYRNPGLHFGDIHI+ A YV+ LE YVG+SKY +FFP
Sbjct: 613 GELKEDEVSGLAKSQ----DVLVYRNPGLHFGDIHILKATYVKSLEQYVGNSKYGVFFPQ 668
Query: 355 VGPRSIADEIAGGDFDGDLYWVSKHPQV 272
GPRS+ DEIAGGDFDGD+Y++S++P++
Sbjct: 669 KGPRSLGDEIAGGDFDGDMYFISRNPKL 696
[16][TOP]
>UniRef100_B8A6J2 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8A6J2_ORYSI
Length = 1172
Score = 114 bits (285), Expect = 4e-24
Identities = 50/88 (56%), Positives = 68/88 (77%)
Frame = -1
Query: 535 GRLKANEVCIIHENGQITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPC 356
G+L NEVC+I + GQ++GDVLVY+ PGLH GDIH++ A Y ++ VG+SK+AI FP
Sbjct: 780 GKLGPNEVCVILDYGQVSGDVLVYKYPGLHPGDIHVLKATYSSDIGKVVGNSKHAILFPT 839
Query: 355 VGPRSIADEIAGGDFDGDLYWVSKHPQV 272
G RS+ADE+A DFDGD+YWVS +P++
Sbjct: 840 TGQRSLADEMANSDFDGDIYWVSLNPKL 867
[17][TOP]
>UniRef100_O82189 Putative uncharacterized protein At2g19920 n=1 Tax=Arabidopsis
thaliana RepID=O82189_ARATH
Length = 905
Score = 108 bits (269), Expect = 3e-22
Identities = 50/88 (56%), Positives = 64/88 (72%)
Frame = -1
Query: 535 GRLKANEVCIIHENGQITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPC 356
G LK +EVC+I NPGLHFGDIHI+ A YV+ LE YVG+SKY +FFP
Sbjct: 618 GELKEDEVCVI-------------LNPGLHFGDIHILKATYVKSLEQYVGNSKYGVFFPQ 664
Query: 355 VGPRSIADEIAGGDFDGDLYWVSKHPQV 272
GPRS+ DEIAGGDFDGD+Y++S++P++
Sbjct: 665 KGPRSLGDEIAGGDFDGDMYFISRNPKL 692
[18][TOP]
>UniRef100_A9TZH6 RNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TZH6_PHYPA
Length = 1042
Score = 91.7 bits (226), Expect = 3e-17
Identities = 45/96 (46%), Positives = 57/96 (59%)
Frame = -1
Query: 529 LKANEVCIIHENGQITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPCVG 350
LK NEV +I ++ G VLVY+NPG H+GD+H+ A + E L YVG + IFF G
Sbjct: 668 LKPNEVAVIKNGDKVLGKVLVYKNPGKHWGDVHVFDAVWDERLNPYVGPANQTIFFSVRG 727
Query: 349 PRSIADEIAGGDFDGDLYWVSKHPQVSISILVQKSS 242
R + DEIA D DGD YWV + Q + S L SS
Sbjct: 728 NRPVVDEIANSDLDGDFYWVCFNTQATNSFLDYFSS 763
[19][TOP]
>UniRef100_Q0WNQ6 Putative uncharacterized protein At2g19930 (Fragment) n=1
Tax=Arabidopsis thaliana RepID=Q0WNQ6_ARATH
Length = 339
Score = 90.9 bits (224), Expect = 5e-17
Identities = 38/58 (65%), Positives = 51/58 (87%)
Frame = -1
Query: 445 FGDIHIMHARYVEELESYVGHSKYAIFFPCVGPRSIADEIAGGDFDGDLYWVSKHPQV 272
FGDIHI+ A YV+ LE YVG+SK+A+FFP GPRS+ DEIAGGDFDGD+Y++S++P++
Sbjct: 1 FGDIHILKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPEL 58
[20][TOP]
>UniRef100_A9TF55 RNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TF55_PHYPA
Length = 1040
Score = 88.6 bits (218), Expect = 3e-16
Identities = 41/80 (51%), Positives = 53/80 (66%)
Frame = -1
Query: 529 LKANEVCIIHENGQITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPCVG 350
LK NEV I+ ++ G VLVY+NPG H+GD+HI A + E L YVG +K+AIFF G
Sbjct: 662 LKPNEVAIVKNGEKVIGKVLVYKNPGKHWGDVHIFDAVWDERLNPYVGPTKHAIFFSVRG 721
Query: 349 PRSIADEIAGGDFDGDLYWV 290
R + DEIA D GDL+W+
Sbjct: 722 NRPVVDEIANSDLCGDLFWL 741
[21][TOP]
>UniRef100_A5ANX1 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5ANX1_VITVI
Length = 1202
Score = 70.9 bits (172), Expect = 6e-11
Identities = 30/46 (65%), Positives = 41/46 (89%)
Frame = -1
Query: 535 GRLKANEVCIIHENGQITGDVLVYRNPGLHFGDIHIMHARYVEELE 398
G+LK++EVCII ++GQ+ G VLVY++PGLHFGDIH+++A YVE LE
Sbjct: 889 GKLKSDEVCIILDHGQVQGRVLVYKHPGLHFGDIHVLNATYVEALE 934
[22][TOP]
>UniRef100_Q6RFH9 RNA-directed RNA polymerase 2 n=1 Tax=Hordeum vulgare subsp.
vulgare RepID=Q6RFH9_HORVD
Length = 1115
Score = 59.3 bits (142), Expect = 2e-07
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = -1
Query: 487 ITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPCVGPRSIADEIAGGDFD 308
+TG V+V +NP LH GDI I+ A Y L+ H + FP GPR +E +G D D
Sbjct: 749 VTGKVVVAKNPCLHPGDIRILEAVYTPVLD----HMVNCVVFPQQGPRPHPNECSGSDLD 804
Query: 307 GDLYWVSKHPQV 272
GD+Y+VS P +
Sbjct: 805 GDIYFVSWDPDL 816
[23][TOP]
>UniRef100_Q6RFI0 RNA-directed RNA polymerase 1 n=1 Tax=Hordeum vulgare subsp.
vulgare RepID=Q6RFI0_HORVD
Length = 1115
Score = 58.9 bits (141), Expect = 2e-07
Identities = 29/72 (40%), Positives = 43/72 (59%)
Frame = -1
Query: 487 ITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPCVGPRSIADEIAGGDFD 308
+TG V+V +NP +H GDI I+ A + +GH + FP +GPR +E +G D D
Sbjct: 748 VTGKVIVAKNPCIHPGDIRILQAVH----SPLLGHMVNCVVFPQLGPRPHPNECSGSDLD 803
Query: 307 GDLYWVSKHPQV 272
GD+Y+VS P +
Sbjct: 804 GDIYFVSWDPDL 815
[24][TOP]
>UniRef100_B5M060 RNA-directed RNA polymerase 1b n=1 Tax=Hordeum vulgare
RepID=B5M060_HORVU
Length = 1115
Score = 58.9 bits (141), Expect = 2e-07
Identities = 29/72 (40%), Positives = 43/72 (59%)
Frame = -1
Query: 487 ITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPCVGPRSIADEIAGGDFD 308
+TG V+V +NP +H GDI I+ A + +GH + FP +GPR +E +G D D
Sbjct: 748 VTGKVIVAKNPCIHPGDIRILQAVH----SPLLGHMVNCVVFPQLGPRPHPNECSGSDLD 803
Query: 307 GDLYWVSKHPQV 272
GD+Y+VS P +
Sbjct: 804 GDIYFVSWDPDL 815
[25][TOP]
>UniRef100_B5M059 RNA-directed RNA polymerase 1a (Fragment) n=1 Tax=Hordeum vulgare
RepID=B5M059_HORVU
Length = 1114
Score = 58.9 bits (141), Expect = 2e-07
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = -1
Query: 487 ITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPCVGPRSIADEIAGGDFD 308
+TG V+V +NP LH GDI I+ A Y L+ H + FP GPR +E +G D D
Sbjct: 749 VTGKVVVAKNPCLHPGDIRILKAVYTPVLD----HMVNCVVFPQQGPRPHPNECSGSDLD 804
Query: 307 GDLYWVSKHPQV 272
GD+Y+VS P +
Sbjct: 805 GDIYFVSWDPDL 816
[26][TOP]
>UniRef100_C3Z737 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3Z737_BRAFL
Length = 1492
Score = 58.9 bits (141), Expect = 2e-07
Identities = 32/76 (42%), Positives = 43/76 (56%)
Frame = -1
Query: 499 ENGQITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPCVGPRSIADEIAG 320
E +TGDV+V RNP H GD+ + A V L H I FP GPR +E++G
Sbjct: 844 ETKVLTGDVVVSRNPCFHPGDVRKLRAVDVPALH----HMVDVIVFPSKGPRPHPNEMSG 899
Query: 319 GDFDGDLYWVSKHPQV 272
GD DGD ++V+ HP +
Sbjct: 900 GDLDGDQFFVTWHPDL 915
[27][TOP]
>UniRef100_UPI0001868BE6 hypothetical protein BRAFLDRAFT_101867 n=1 Tax=Branchiostoma
floridae RepID=UPI0001868BE6
Length = 1395
Score = 58.5 bits (140), Expect = 3e-07
Identities = 32/76 (42%), Positives = 43/76 (56%)
Frame = -1
Query: 499 ENGQITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPCVGPRSIADEIAG 320
E +TGDV+V RNP H GD+ + A V L H I FP GPR +E++G
Sbjct: 717 ETKVLTGDVVVSRNPCFHPGDVRKLRAVDVPGLH----HMVDVIVFPSKGPRPHPNEMSG 772
Query: 319 GDFDGDLYWVSKHPQV 272
GD DGD ++V+ HP +
Sbjct: 773 GDLDGDQFFVTWHPDL 788
[28][TOP]
>UniRef100_UPI0000DF085E Os02g0736200 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000DF085E
Length = 476
Score = 58.5 bits (140), Expect = 3e-07
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = -1
Query: 487 ITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPCVGPRSIADEIAGGDFD 308
+TG V++ +NP LH GDI I+HA V L H + FP GPR +E +G D D
Sbjct: 403 VTGKVVIAKNPCLHPGDIRILHAVDVPVLH----HMFNCVVFPQQGPRPHPNECSGSDLD 458
Query: 307 GDLYWVSKHPQV 272
GD+Y+VS P +
Sbjct: 459 GDIYFVSWDPSL 470
[29][TOP]
>UniRef100_Q0DXS3 Probable RNA-dependent RNA polymerase 1 n=1 Tax=Oryza sativa
Japonica Group RepID=RDR1_ORYSJ
Length = 740
Score = 58.5 bits (140), Expect = 3e-07
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = -1
Query: 487 ITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPCVGPRSIADEIAGGDFD 308
+TG V++ +NP LH GDI I+HA V L H + FP GPR +E +G D D
Sbjct: 376 VTGKVVIAKNPCLHPGDIRILHAVDVPVLH----HMFNCVVFPQQGPRPHPNECSGSDLD 431
Query: 307 GDLYWVSKHPQV 272
GD+Y+VS P +
Sbjct: 432 GDIYFVSWDPSL 443
[30][TOP]
>UniRef100_C7F747 Putative RNA-dependent RNA polymerase n=1 Tax=Zea mays
RepID=C7F747_MAIZE
Length = 1108
Score = 58.2 bits (139), Expect = 4e-07
Identities = 35/89 (39%), Positives = 46/89 (51%)
Frame = -1
Query: 502 HENGQITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPCVGPRSIADEIA 323
H +TG V+V +NP LH GDI ++ A V L H + FP GPR +E +
Sbjct: 746 HRKVVVTGKVVVAKNPCLHPGDIRVLQAVDVPALH----HLFDCVVFPQQGPRPHPNECS 801
Query: 322 GGDFDGDLYWVSKHPQVSISILVQKSSCT 236
G D DGD+Y+VS P + S LV T
Sbjct: 802 GSDLDGDIYFVSWDPHLIPSRLVDPMDYT 830
[31][TOP]
>UniRef100_C5XZ94 Putative uncharacterized protein Sb04g028630 n=1 Tax=Sorghum
bicolor RepID=C5XZ94_SORBI
Length = 1114
Score = 56.6 bits (135), Expect = 1e-06
Identities = 31/77 (40%), Positives = 42/77 (54%)
Frame = -1
Query: 502 HENGQITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPCVGPRSIADEIA 323
H +TG V+V +NP LH GDI ++ A V L H + FP GPR +E +
Sbjct: 746 HHKIVVTGKVVVAKNPCLHPGDIRVLQAVDVPSLH----HMFDCVVFPQQGPRPHPNECS 801
Query: 322 GGDFDGDLYWVSKHPQV 272
G D DGD+Y+VS P +
Sbjct: 802 GSDLDGDIYFVSWDPDL 818
[32][TOP]
>UniRef100_Q3SE67 Chromosome undetermined scaffold_85, whole genome shotgun sequence
n=1 Tax=Paramecium tetraurelia RepID=Q3SE67_PARTE
Length = 1331
Score = 56.6 bits (135), Expect = 1e-06
Identities = 38/92 (41%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Frame = -1
Query: 514 VCIIHEN-----GQITGDVLVYRNPGLHFGDIHIMHARYVEE-LESYVGHSKYA-----I 368
VCI+ ++ ITG+++V RNP LH GDI + A E L Y + +A I
Sbjct: 877 VCIVKQSLDVNHKYITGEIIVVRNPCLHPGDIRKVRALSENEILSRYNMKNPFAEYYNCI 936
Query: 367 FFPCVGPRSIADEIAGGDFDGDLYWVSKHPQV 272
FPC G SI + GGD DGD+Y+VS P+V
Sbjct: 937 VFPCKG-NSIPADCGGGDLDGDIYFVSWDPKV 967
[33][TOP]
>UniRef100_C3Z736 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3Z736_BRAFL
Length = 1282
Score = 56.2 bits (134), Expect = 1e-06
Identities = 29/71 (40%), Positives = 42/71 (59%)
Frame = -1
Query: 490 QITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPCVGPRSIADEIAGGDF 311
++TGDV+V RNP H GD+ + A + L H I FP GPR +E++GGD
Sbjct: 631 KVTGDVVVTRNPCFHPGDLRKLRAVDIPSLH----HMVDVIVFPSKGPRPHPNEMSGGDL 686
Query: 310 DGDLYWVSKHP 278
DGD ++V+ +P
Sbjct: 687 DGDQFFVTWYP 697
[34][TOP]
>UniRef100_UPI0001868CDD hypothetical protein BRAFLDRAFT_101868 n=1 Tax=Branchiostoma
floridae RepID=UPI0001868CDD
Length = 1317
Score = 55.8 bits (133), Expect = 2e-06
Identities = 29/70 (41%), Positives = 41/70 (58%)
Frame = -1
Query: 490 QITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPCVGPRSIADEIAGGDF 311
++TGDV+V RNP H GD+ + A + L H I FP GPR +E++GGD
Sbjct: 672 KVTGDVVVTRNPCFHPGDLRKLRAVDIPSLH----HMVDVIVFPSKGPRPHPNEMSGGDL 727
Query: 310 DGDLYWVSKH 281
DGD ++V+ H
Sbjct: 728 DGDQFFVTWH 737
[35][TOP]
>UniRef100_Q8X1C2 Putative RNA-dependent RNA polymerase (Fragment) n=1 Tax=Phomopsis
sp. CMW 5588 RepID=Q8X1C2_9PEZI
Length = 1122
Score = 54.3 bits (129), Expect = 5e-06
Identities = 30/66 (45%), Positives = 37/66 (56%)
Frame = -1
Query: 487 ITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPCVGPRSIADEIAGGDFD 308
ITG +V RNP LH GD+ ++ A V EL H K + FP G R I +GGD D
Sbjct: 565 ITGICVVGRNPSLHPGDVRVVEAVDVPELR----HLKNVVVFPKTGDRDIPSMCSGGDMD 620
Query: 307 GDLYWV 290
GD Y+V
Sbjct: 621 GDDYFV 626
[36][TOP]
>UniRef100_Q8TGV4 Putative RNA-dependent RNA polymerase RDP-1 n=1 Tax=Diaporthe
perjuncta RepID=Q8TGV4_9PEZI
Length = 1484
Score = 53.9 bits (128), Expect = 7e-06
Identities = 29/66 (43%), Positives = 37/66 (56%)
Frame = -1
Query: 487 ITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPCVGPRSIADEIAGGDFD 308
ITG +V RNP LH GD+ ++ A V EL H K + FP G R + +GGD D
Sbjct: 945 ITGICVVGRNPALHPGDVRVVEAVDVPELR----HLKNVVVFPKTGDRDVPSMCSGGDMD 1000
Query: 307 GDLYWV 290
GD Y+V
Sbjct: 1001 GDDYFV 1006
[37][TOP]
>UniRef100_A9U458 RNA-directed RNA polymerase (Fragment) n=2 Tax=Physcomitrella
patens subsp. patens RepID=A9U458_PHYPA
Length = 1049
Score = 53.5 bits (127), Expect = 9e-06
Identities = 29/72 (40%), Positives = 41/72 (56%)
Frame = -1
Query: 487 ITGDVLVYRNPGLHFGDIHIMHARYVEELESYVGHSKYAIFFPCVGPRSIADEIAGGDFD 308
ITG V++ +NP LH GDI I+ A + EL S V + P GPR +E++G D D
Sbjct: 675 ITGKVIMVKNPCLHPGDIRILEAVDLPELHSMVD----CLVLPQNGPRPHPNEVSGSDLD 730
Query: 307 GDLYWVSKHPQV 272
GD+Y+ P +
Sbjct: 731 GDVYFTCWDPNL 742