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[1][TOP]
>UniRef100_UPI0001983EAA PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001983EAA
Length = 1821
Score = 148 bits (374), Expect = 2e-34
Identities = 72/109 (66%), Positives = 89/109 (81%)
Frame = +3
Query: 39 HASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEF 218
H+ VEKI++LH DM+V+GYVK+VT KGCFI+LSRK+DARIL+ NLSD Y+E PE+EF
Sbjct: 1261 HSPNSRVEKIDNLHSDMLVQGYVKNVTSKGCFILLSRKLDARILLANLSDGYVEKPEREF 1320
Query: 219 PVGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGDLI 365
P+GKLV GRV+SVEPLS+RVEVTLKTS+ + KSE D S VGD+I
Sbjct: 1321 PIGKLVSGRVLSVEPLSRRVEVTLKTSSATSVQKSEVNDFSSILVGDII 1369
[2][TOP]
>UniRef100_A7PW23 Chromosome chr8 scaffold_34, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PW23_VITVI
Length = 1799
Score = 148 bits (374), Expect = 2e-34
Identities = 72/109 (66%), Positives = 89/109 (81%)
Frame = +3
Query: 39 HASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEF 218
H+ VEKI++LH DM+V+GYVK+VT KGCFI+LSRK+DARIL+ NLSD Y+E PE+EF
Sbjct: 1239 HSPNSRVEKIDNLHSDMLVQGYVKNVTSKGCFILLSRKLDARILLANLSDGYVEKPEREF 1298
Query: 219 PVGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGDLI 365
P+GKLV GRV+SVEPLS+RVEVTLKTS+ + KSE D S VGD+I
Sbjct: 1299 PIGKLVSGRVLSVEPLSRRVEVTLKTSSATSVQKSEVNDFSSILVGDII 1347
[3][TOP]
>UniRef100_UPI0001A7B055 RNA binding n=1 Tax=Arabidopsis thaliana RepID=UPI0001A7B055
Length = 1896
Score = 142 bits (357), Expect = 2e-32
Identities = 69/117 (58%), Positives = 90/117 (76%)
Frame = +3
Query: 15 SADVHSNEHASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQY 194
S D+ +N++ K+ E+IEDL PDM V+GYVK+ KGCFIILSR ++A++ + NL D +
Sbjct: 1323 SEDLKNNDNVCKR-FERIEDLSPDMGVQGYVKNTMSKGCFIILSRTVEAKVRLSNLCDTF 1381
Query: 195 IEDPEKEFPVGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGDLI 365
+++PEKEFPVGKLV GRV++VEPLSKR+EVTLKT KSES DL K HVGD+I
Sbjct: 1382 VKEPEKEFPVGKLVTGRVLNVEPLSKRIEVTLKTVNAGGRPKSESYDLKKLHVGDMI 1438
[4][TOP]
>UniRef100_Q9LHM6 Pre-rRNA processing protein RRP5 n=2 Tax=Arabidopsis thaliana
RepID=Q9LHM6_ARATH
Length = 1765
Score = 142 bits (357), Expect = 2e-32
Identities = 69/117 (58%), Positives = 90/117 (76%)
Frame = +3
Query: 15 SADVHSNEHASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQY 194
S D+ +N++ K+ E+IEDL PDM V+GYVK+ KGCFIILSR ++A++ + NL D +
Sbjct: 1192 SEDLKNNDNVCKR-FERIEDLSPDMGVQGYVKNTMSKGCFIILSRTVEAKVRLSNLCDTF 1250
Query: 195 IEDPEKEFPVGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGDLI 365
+++PEKEFPVGKLV GRV++VEPLSKR+EVTLKT KSES DL K HVGD+I
Sbjct: 1251 VKEPEKEFPVGKLVTGRVLNVEPLSKRIEVTLKTVNAGGRPKSESYDLKKLHVGDMI 1307
[5][TOP]
>UniRef100_B9T015 Programmed cell death protein, putative n=1 Tax=Ricinus communis
RepID=B9T015_RICCO
Length = 1330
Score = 141 bits (356), Expect = 2e-32
Identities = 74/119 (62%), Positives = 95/119 (79%)
Frame = +3
Query: 3 LSPDSADVHSNEHASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNL 182
LS +S+++ N + + VEKI+DL P+ VV+GYVK+V PKGCFI LSRKIDA+IL+ NL
Sbjct: 750 LSQNSSELSKN---ADQRVEKIDDLQPNTVVQGYVKNVAPKGCFIFLSRKIDAKILLSNL 806
Query: 183 SDQYIEDPEKEFPVGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGD 359
SD+++ PE+EFP+GKLV GRV+SVEPLSKRVEVTLK + S T KSE DLS+ +VGD
Sbjct: 807 SDEFVVSPEEEFPIGKLVTGRVLSVEPLSKRVEVTLKKNAKS-TGKSELNDLSRLNVGD 864
[6][TOP]
>UniRef100_B9TDI4 Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus
communis RepID=B9TDI4_RICCO
Length = 109
Score = 122 bits (305), Expect = 2e-26
Identities = 61/87 (70%), Positives = 73/87 (83%)
Frame = +3
Query: 99 GYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLVIGRVISVEPLSKRV 278
GYVK+V PKGCFI LSRKIDA+IL+ NLSD+++ PE+EFP+GKLV GRV+SVEPLSKRV
Sbjct: 1 GYVKNVAPKGCFIFLSRKIDAKILLSNLSDEFVVSPEEEFPIGKLVTGRVLSVEPLSKRV 60
Query: 279 EVTLKTSTVSDTSKSESMDLSKFHVGD 359
EVTLK + S T KSE DLS+ +VGD
Sbjct: 61 EVTLKKNAKS-TGKSELNDLSRLNVGD 86
[7][TOP]
>UniRef100_Q7XB75 Putative pre-rRNA processing protein RRP5 n=1 Tax=Oryza sativa
Japonica Group RepID=Q7XB75_ORYSJ
Length = 1668
Score = 120 bits (302), Expect = 4e-26
Identities = 59/102 (57%), Positives = 78/102 (76%)
Frame = +3
Query: 60 EKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLVI 239
EKI DL P VKGYVKSV KGCFI++SR I+ARI++ NLSD+Y+E+P+ +FPVG LV
Sbjct: 1118 EKINDLCPGTEVKGYVKSVNSKGCFIMVSRTIEARIILSNLSDEYVENPQNDFPVGLLVH 1177
Query: 240 GRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGDLI 365
GRV+S EP S +VEV+L+ +T S + KS+ + S HVGD+I
Sbjct: 1178 GRVLSSEPQSGKVEVSLRKNTGSKSQKSDDISYSDLHVGDII 1219
[8][TOP]
>UniRef100_Q0D7X0 Os07g0203300 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group
RepID=Q0D7X0_ORYSJ
Length = 689
Score = 120 bits (302), Expect = 4e-26
Identities = 59/102 (57%), Positives = 78/102 (76%)
Frame = +3
Query: 60 EKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLVI 239
EKI DL P VKGYVKSV KGCFI++SR I+ARI++ NLSD+Y+E+P+ +FPVG LV
Sbjct: 139 EKINDLCPGTEVKGYVKSVNSKGCFIMVSRTIEARIILSNLSDEYVENPQNDFPVGLLVH 198
Query: 240 GRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGDLI 365
GRV+S EP S +VEV+L+ +T S + KS+ + S HVGD+I
Sbjct: 199 GRVLSSEPQSGKVEVSLRKNTGSKSQKSDDISYSDLHVGDII 240
[9][TOP]
>UniRef100_B9FW29 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group
RepID=B9FW29_ORYSJ
Length = 1898
Score = 120 bits (302), Expect = 4e-26
Identities = 59/102 (57%), Positives = 78/102 (76%)
Frame = +3
Query: 60 EKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLVI 239
EKI DL P VKGYVKSV KGCFI++SR I+ARI++ NLSD+Y+E+P+ +FPVG LV
Sbjct: 1355 EKINDLCPGTEVKGYVKSVNSKGCFIMVSRTIEARIILSNLSDEYVENPQNDFPVGLLVH 1414
Query: 240 GRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGDLI 365
GRV+S EP S +VEV+L+ +T S + KS+ + S HVGD+I
Sbjct: 1415 GRVLSSEPQSGKVEVSLRKNTGSKSQKSDDISYSDLHVGDII 1456
[10][TOP]
>UniRef100_B8B884 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8B884_ORYSI
Length = 1848
Score = 120 bits (302), Expect = 4e-26
Identities = 59/102 (57%), Positives = 78/102 (76%)
Frame = +3
Query: 60 EKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLVI 239
EKI DL P VKGYVKSV KGCFI++SR I+ARI++ NLSD+Y+E+P+ +FPVG LV
Sbjct: 1333 EKINDLCPGTEVKGYVKSVNSKGCFIMVSRTIEARIILSNLSDEYVENPQNDFPVGLLVH 1392
Query: 240 GRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGDLI 365
GRV+S EP S +VEV+L+ +T S + KS+ + S HVGD+I
Sbjct: 1393 GRVLSSEPQSGKVEVSLRKNTGSKSQKSDDISYSDLHVGDII 1434
[11][TOP]
>UniRef100_C5XCN3 Putative uncharacterized protein Sb02g006000 n=1 Tax=Sorghum bicolor
RepID=C5XCN3_SORBI
Length = 1862
Score = 118 bits (295), Expect = 2e-25
Identities = 55/103 (53%), Positives = 77/103 (74%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+EKI+DL P +KGYVK+V KGCFI++SR ++ARI + NLSD+Y+E+P+K+FPVG LV
Sbjct: 1303 IEKIKDLLPGTEIKGYVKNVNSKGCFIMISRMVEARITLSNLSDEYVENPQKDFPVGMLV 1362
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGDLI 365
GRV+S +P S RVE +L+ +T S K + + S HVGD+I
Sbjct: 1363 HGRVLSTDPSSGRVEASLRKTTGSKLEKLDDISYSDLHVGDII 1405
[12][TOP]
>UniRef100_Q9C7B6 rRNA biogenesis protein, putative, 3' partial; 75505-85642 (Fragment)
n=1 Tax=Arabidopsis thaliana RepID=Q9C7B6_ARATH
Length = 1396
Score = 90.5 bits (223), Expect = 5e-17
Identities = 42/76 (55%), Positives = 59/76 (77%)
Frame = +3
Query: 15 SADVHSNEHASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQY 194
S D+ +N++ K+ E+IEDL PDM V+GYVK+ KGCFIILSR ++A++ + NL D +
Sbjct: 1322 SEDLKNNDNVCKR-FERIEDLSPDMGVQGYVKNTMSKGCFIILSRTVEAKVRLSNLCDTF 1380
Query: 195 IEDPEKEFPVGKLVIG 242
+++PEKEFPVGKLV G
Sbjct: 1381 VKEPEKEFPVGKLVTG 1396
[13][TOP]
>UniRef100_Q010S4 rRNA processing protein Rrp5 (ISS) n=1 Tax=Ostreococcus tauri
RepID=Q010S4_OSTTA
Length = 1947
Score = 84.7 bits (208), Expect = 3e-15
Identities = 43/103 (41%), Positives = 63/103 (61%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
V+ + +L P +KGYVK+ T KGCF+ LSR IDA + NL+D +I DP FP GKLV
Sbjct: 1318 VQDVANLVPGQRIKGYVKATTKKGCFVALSRSIDAMCKLSNLADDFIADPIASFPPGKLV 1377
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGDLI 365
GR++S + RVE++L+ + S + D+S VG ++
Sbjct: 1378 QGRIVSADAAKGRVEISLRE---RENSSQGNADVSGVDVGSVM 1417
[14][TOP]
>UniRef100_A4S384 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S384_OSTLU
Length = 1869
Score = 83.6 bits (205), Expect = 6e-15
Identities = 44/103 (42%), Positives = 62/103 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ I +L P VKGYVK+ + KGCFI LSR IDA + NL+D +I DP K FP GKLV
Sbjct: 1299 ITDISNLVPGQRVKGYVKATSKKGCFIALSRGIDAMCKLSNLADSFIADPAKTFPPGKLV 1358
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGDLI 365
GR++S + RVE+ + + + + D+S VGD++
Sbjct: 1359 EGRIVSADAAKGRVELAFRETDAT----QGNADVSTVKVGDVL 1397
[15][TOP]
>UniRef100_C1NA95 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1NA95_9CHLO
Length = 2229
Score = 80.9 bits (198), Expect = 4e-14
Identities = 37/82 (45%), Positives = 55/82 (67%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K +E + L P V G+VK T GCF+ L R +DAR+ + NLS+++++DP K FP G
Sbjct: 1524 KLAIETCDQLTPGTKVAGFVKQCTKGGCFVALGRTVDARVKLCNLSNEFVDDPPKAFPKG 1583
Query: 228 KLVIGRVISVEPLSKRVEVTLK 293
LV G V+SV+ ++RVE+TL+
Sbjct: 1584 ALVTGTVLSVDAENERVEITLR 1605
[16][TOP]
>UniRef100_C1ECK5 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1ECK5_9CHLO
Length = 2018
Score = 80.1 bits (196), Expect = 7e-14
Identities = 37/97 (38%), Positives = 58/97 (59%)
Frame = +3
Query: 45 SKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPV 224
S + + L P V G+VK V GCF+ +SR +DAR+ + NL+D ++ DP +EFP
Sbjct: 1376 SSNGISSVSQLAPGAHVSGFVKQVNKGGCFVAISRSVDARVKMCNLADTFVSDPAQEFPK 1435
Query: 225 GKLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSESMD 335
GKLV G ++SV+ S R E+TL++ + + +D
Sbjct: 1436 GKLVKGTILSVDESSGRAEMTLRSDGMDAAAGRSQID 1472
[17][TOP]
>UniRef100_A9SPX0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SPX0_PHYPA
Length = 1785
Score = 78.6 bits (192), Expect = 2e-13
Identities = 39/97 (40%), Positives = 70/97 (72%), Gaps = 2/97 (2%)
Frame = +3
Query: 15 SADVHSNEHASKKCVE-KIEDLHP-DMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSD 188
+A++ +++ A+ +CV+ + + P +V++G+VKS + KGCFI L+ ++DA +L NLS
Sbjct: 1205 AANLQASDSATTRCVKFQCRTIKPLCLVLQGFVKSTSKKGCFISLAPQVDAIVLTCNLSK 1264
Query: 189 QYIEDPEKEFPVGKLVIGRVISVEPLSKRVEVTLKTS 299
+++DP + FP GKL+ GR+I+++ RVE++LKTS
Sbjct: 1265 AFVKDPAESFPPGKLIKGRIINIDADLGRVEMSLKTS 1301
Score = 56.6 bits (135), Expect = 8e-07
Identities = 27/94 (28%), Positives = 47/94 (50%)
Frame = +3
Query: 42 ASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFP 221
A+ I L P V+ GYV ++T +GCF+ ++ +P ++D+++ DP F
Sbjct: 626 AASSLPSDISQLQPQSVIPGYVANITDRGCFVRFLGRLTGLASVPQVADEFVSDPSNHFS 685
Query: 222 VGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSKS 323
VG+ V +V+ V + + + LK S T S
Sbjct: 686 VGQSVRAQVLEVYHDTGKFSLCLKQSVCFSTDVS 719
[18][TOP]
>UniRef100_Q5KH56 RRNA processing-related protein, putative n=1 Tax=Filobasidiella
neoformans RepID=Q5KH56_CRYNE
Length = 1484
Score = 75.5 bits (184), Expect = 2e-12
Identities = 37/121 (30%), Positives = 66/121 (54%)
Frame = +3
Query: 3 LSPDSADVHSNEHASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNL 182
LS + V E+ + + ++DL V+G VK++ G F+ L R + ARI+I L
Sbjct: 878 LSTRLSRVQGKENVVDREINTVDDLKEGESVRGLVKNIAGHGVFVSLGRNVTARIMIKEL 937
Query: 183 SDQYIEDPEKEFPVGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGDL 362
D+Y++D + F + +LV G+++S+ P S +E+TL+ + K+ + LS F G
Sbjct: 938 FDEYVKDWKSRFEINQLVSGKILSINPGSNSIEMTLRKNPSKSAKKTALLSLSDFEEGQK 997
Query: 363 I 365
+
Sbjct: 998 V 998
[19][TOP]
>UniRef100_Q55SR9 Putative uncharacterized protein n=1 Tax=Filobasidiella neoformans
RepID=Q55SR9_CRYNE
Length = 1484
Score = 75.5 bits (184), Expect = 2e-12
Identities = 37/121 (30%), Positives = 66/121 (54%)
Frame = +3
Query: 3 LSPDSADVHSNEHASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNL 182
LS + V E+ + + ++DL V+G VK++ G F+ L R + ARI+I L
Sbjct: 878 LSTRLSRVQGKENVVDREINTVDDLKEGESVRGLVKNIAGHGVFVSLGRNVTARIMIKEL 937
Query: 183 SDQYIEDPEKEFPVGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGDL 362
D+Y++D + F + +LV G+++S+ P S +E+TL+ + K+ + LS F G
Sbjct: 938 FDEYVKDWKSRFEINQLVSGKILSINPGSNSIEMTLRKNPSKSAKKTALLSLSDFEEGQK 997
Query: 363 I 365
+
Sbjct: 998 V 998
[20][TOP]
>UniRef100_B8PP03 Predicted protein (Fragment) n=1 Tax=Postia placenta Mad-698-R
RepID=B8PP03_POSPM
Length = 1088
Score = 73.6 bits (179), Expect = 7e-12
Identities = 44/117 (37%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Frame = +3
Query: 3 LSPDSA-DVHSNEHASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPN 179
L PD A DV +E V+ + DL V+G++K+V G F++L R IDAR+ I
Sbjct: 583 LYPDQAKDVKDHE------VDGVSDLKVGQTVRGFIKNVAEHGIFVMLGRHIDARVQIKE 636
Query: 180 LSDQYIEDPEKEFPVGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSES--MDLSK 344
L D+Y++D + F +LV GRV+SV+ K+VE+T ++ + ++S+S DLS+
Sbjct: 637 LFDEYVKDWKSHFAANQLVKGRVLSVDFDKKQVEMTFRSGDLKRDARSQSTLADLSE 693
[21][TOP]
>UniRef100_UPI000023E89B hypothetical protein FG02561.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023E89B
Length = 1782
Score = 72.0 bits (175), Expect = 2e-11
Identities = 34/87 (39%), Positives = 60/87 (68%)
Frame = +3
Query: 51 KCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGK 230
K + + L +V+G+VK+V+ KG F++L ++ A + I NLSD+YI++ + F V +
Sbjct: 1189 KEISDVSQLDAGDIVRGFVKNVSDKGLFVLLGGQVTALVKISNLSDRYIKEWKDHFQVDQ 1248
Query: 231 LVIGRVISVEPLSKRVEVTLKTSTVSD 311
LV GRV++V+ L++ VE++LK+S V +
Sbjct: 1249 LVKGRVVAVDKLTRHVEMSLKSSVVDE 1275
[22][TOP]
>UniRef100_C7Z9Q8 Putative uncharacterized protein n=1 Tax=Nectria haematococca mpVI
77-13-4 RepID=C7Z9Q8_NECH7
Length = 1773
Score = 70.5 bits (171), Expect = 6e-11
Identities = 35/85 (41%), Positives = 59/85 (69%)
Frame = +3
Query: 51 KCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGK 230
K + I ++P +V+G+VK+V+ KG F++L ++ + I NLSD+Y++D + F V +
Sbjct: 1184 KEISNISHVNPGDLVRGFVKNVSDKGLFVLLGGQVTGLVKISNLSDRYLKDWKDNFQVDQ 1243
Query: 231 LVIGRVISVEPLSKRVEVTLKTSTV 305
LV RVI+V+ +KRVE++LK+S V
Sbjct: 1244 LVKARVIAVDREAKRVELSLKSSIV 1268
[23][TOP]
>UniRef100_B0CR68 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0CR68_LACBS
Length = 1468
Score = 67.4 bits (163), Expect = 5e-10
Identities = 39/112 (34%), Positives = 66/112 (58%), Gaps = 4/112 (3%)
Frame = +3
Query: 42 ASKKCVEK----IEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPE 209
++KK V++ I D+H V+G +KSV G F+ + R IDAR+ I L D ++ED +
Sbjct: 877 STKKIVDQEIIHIFDIHVGDTVRGSIKSVADHGLFVTIGRDIDARVQIRELFDDFVEDWK 936
Query: 210 KEFPVGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGDLI 365
F ++V G ++SV+ +++VE+TLK+ +S T S+ L+ VG +
Sbjct: 937 ARFQEKQIVKGLILSVDLQTRKVEMTLKSGDLS-TRNGSSVGLADLKVGQKV 987
[24][TOP]
>UniRef100_A9UQD5 Predicted protein (Fragment) n=1 Tax=Monosiga brevicollis
RepID=A9UQD5_MONBE
Length = 1691
Score = 67.0 bits (162), Expect = 6e-10
Identities = 37/88 (42%), Positives = 56/88 (63%)
Frame = +3
Query: 42 ASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFP 221
A+K V ++ED+ D V +G V + T +G F+ LSR + AR+ I NLSD ++ D +K F
Sbjct: 1379 ATKASVLRMEDVDTDQVHRGVVCNATDEGVFVALSRNVTARVQIANLSDLFVRDIKKAFK 1438
Query: 222 VGKLVIGRVISVEPLSKRVEVTLKTSTV 305
VG LV GR+++ R+E++LK S V
Sbjct: 1439 VGTLVQGRIMA--KTDGRLEMSLKKSDV 1464
[25][TOP]
>UniRef100_C9SZ75 rRNA biogenesis protein RRP5 n=1 Tax=Verticillium albo-atrum VaMs.102
RepID=C9SZ75_9PEZI
Length = 1789
Score = 66.2 bits (160), Expect = 1e-09
Identities = 32/88 (36%), Positives = 57/88 (64%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ ++ + V+G+VK V KG F++L + A + I NLSD+++++ ++ F V +LV
Sbjct: 1199 ITSVKQVVSGSTVRGFVKHVADKGVFVLLGGSVSALVKISNLSDRFLKEWKEHFQVDQLV 1258
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSK 320
GRV+SV+ + +VE++LK+S V D K
Sbjct: 1259 KGRVLSVDEGAGQVELSLKSSVVDDNYK 1286
[26][TOP]
>UniRef100_A8N2C6 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8N2C6_COPC7
Length = 1462
Score = 66.2 bits (160), Expect = 1e-09
Identities = 32/89 (35%), Positives = 56/89 (62%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ ++ DL V+G+VK++ +G F+ + R IDAR+ I L D+Y++D + F +LV
Sbjct: 876 ISELSDLQVGDTVRGFVKNIANQGLFVTIGRGIDARVQIRELFDEYVKDWKPRFKERQLV 935
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKS 323
GRV+S++ + +VE+T K+ +S KS
Sbjct: 936 KGRVLSIDVDNNQVELTFKSGDLSREKKS 964
[27][TOP]
>UniRef100_A7SBJ3 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SBJ3_NEMVE
Length = 1771
Score = 65.9 bits (159), Expect = 1e-09
Identities = 31/68 (45%), Positives = 47/68 (69%)
Frame = +3
Query: 90 VVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLVIGRVISVEPLS 269
+V+GYV T G F+ L R I AR+ I NLS Y+++ + FPVGKLV G+V+S+ P +
Sbjct: 1270 IVRGYVSCATNIGVFVSLGRNIKARVQIKNLSHFYVKEWKPLFPVGKLVTGKVLSINPTN 1329
Query: 270 KRVEVTLK 293
++E++LK
Sbjct: 1330 GQIELSLK 1337
[28][TOP]
>UniRef100_UPI0001925B6F PREDICTED: similar to predicted protein n=1 Tax=Hydra
magnipapillata RepID=UPI0001925B6F
Length = 783
Score = 64.7 bits (156), Expect = 3e-09
Identities = 30/81 (37%), Positives = 53/81 (65%)
Frame = +3
Query: 69 EDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLVIGRV 248
+D+ +++GYVKS + G F+ LS+ I+ R+ I NLS +++D E F VGKLV +V
Sbjct: 631 DDIKEGDILRGYVKSCSKIGVFVSLSQTINGRVQIKNLSQYFVKDFESLFHVGKLVKAKV 690
Query: 249 ISVEPLSKRVEVTLKTSTVSD 311
I ++P + ++++L+ V+D
Sbjct: 691 IHIDPTTNHIDLSLRGKDVND 711
[29][TOP]
>UniRef100_A7ECT3 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum
1980 UF-70 RepID=A7ECT3_SCLS1
Length = 1789
Score = 64.7 bits (156), Expect = 3e-09
Identities = 35/103 (33%), Positives = 58/103 (56%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ I L + +V+G+VK V KG F+ L + A + I +LSD YI+D + EF V +LV
Sbjct: 1216 ISSISQLKVNDIVRGFVKHVADKGLFVNLGGNVTAYVRISDLSDSYIKDWKSEFQVDQLV 1275
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGDLI 365
G+V V+ + ++++LK S + D + + HVG +I
Sbjct: 1276 KGKVTVVDEVLNHIQLSLKPSVI-DKDYIAPLTFNDIHVGQVI 1317
[30][TOP]
>UniRef100_Q4PGT5 Putative uncharacterized protein n=1 Tax=Ustilago maydis
RepID=Q4PGT5_USTMA
Length = 1563
Score = 64.3 bits (155), Expect = 4e-09
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 13/131 (9%)
Frame = +3
Query: 12 DSADVHSNEHASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQ 191
DSA+V E + I DL V+G+VK++T G F+ + RK+DAR+ + L D+
Sbjct: 938 DSAEVTDPE------ISSISDLAKGQKVRGFVKAITNVGLFVTVGRKLDARVQVRELFDE 991
Query: 192 YIEDPEKEFPVGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSESMD------------ 335
++ D + F VG++V G ++ + +E++LK++ S ++E +
Sbjct: 992 FVRDWKTRFTVGQVVSGTIMDTNVHNNEIEMSLKSTPGSIKPRAERAEERALLDAKKRPK 1051
Query: 336 -LSKFHVGDLI 365
L+ F VGD +
Sbjct: 1052 RLADFKVGDKV 1062
[31][TOP]
>UniRef100_C5M6C1 Putative uncharacterized protein n=1 Tax=Candida tropicalis MYA-3404
RepID=C5M6C1_CANTT
Length = 1722
Score = 64.3 bits (155), Expect = 4e-09
Identities = 37/117 (31%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = +3
Query: 15 SADVHSNEHASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQY 194
S + + A+ K + + DL V+KG++K++ G ++ L R I A + + +LSD Y
Sbjct: 1128 SVSLRDDAEAADKVINSVSDLERGHVIKGFIKNIANNGVYVSLGRSIHALVRVSDLSDSY 1187
Query: 195 IEDPEKEFPVGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSK-SESMDLSKFHVGDL 362
++D +K F ++VIG++++ + RV +TLK S V+ K +S D VGD+
Sbjct: 1188 LKDWKKFFKPNQMVIGKIVNCKE-EGRVLMTLKESEVNGELKLMKSFD--DLSVGDI 1241
[32][TOP]
>UniRef100_A5DT96 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus
RepID=A5DT96_LODEL
Length = 1863
Score = 63.5 bits (153), Expect = 7e-09
Identities = 35/97 (36%), Positives = 58/97 (59%)
Frame = +3
Query: 30 SNEHASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPE 209
S+ AS K + ++DL VVKG+VK++ G ++ L R + A + + +LSD Y++D +
Sbjct: 1280 SSAAASDKTINSVDDLSRGQVVKGFVKNIASNGVYVSLGRCVHALVRVSDLSDSYLKDWK 1339
Query: 210 KEFPVGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSK 320
K F + VIG++I+ + K V +TLK S V+ K
Sbjct: 1340 KFFKPAQSVIGKIINCKEQGK-VLMTLKESEVNGDLK 1375
[33][TOP]
>UniRef100_UPI0000E4A1DE PREDICTED: hypothetical protein n=2 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E4A1DE
Length = 1545
Score = 63.2 bits (152), Expect = 9e-09
Identities = 29/77 (37%), Positives = 49/77 (63%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ ++DL VV+GYV+ + KG F+ LS + RIL+ LS Y++DP F VGKL+
Sbjct: 1051 IRTLDDLKKGQVVRGYVRHCSEKGVFVSLSSNLHGRILLKKLSAFYVKDPSAVFTVGKLL 1110
Query: 237 IGRVISVEPLSKRVEVT 287
+V+S++ S ++E++
Sbjct: 1111 STKVLSIDKKSGKIELS 1127
[34][TOP]
>UniRef100_B6K2R4 U3 snoRNP-associated protein Rrp5 n=1 Tax=Schizosaccharomyces
japonicus yFS275 RepID=B6K2R4_SCHJY
Length = 1703
Score = 62.8 bits (151), Expect = 1e-08
Identities = 32/100 (32%), Positives = 59/100 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
++ ED+ + V +G+V +V G F+ L R + R+ I L D +I++ + F V +LV
Sbjct: 1151 IKSFEDVEMNRVYRGFVTNVADTGLFVTLGRNVVGRVKIAELFDSFIKEWKPHFQVSQLV 1210
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVG 356
+V+ V+ KR+E++LK S VS + ++ + + S+ VG
Sbjct: 1211 KAKVVHVDQEKKRIELSLKPSRVS-SKEASAKEFSEIEVG 1249
[35][TOP]
>UniRef100_UPI00003BE50E hypothetical protein DEHA0G03960g n=1 Tax=Debaryomyces hansenii
CBS767 RepID=UPI00003BE50E
Length = 1716
Score = 62.4 bits (150), Expect = 2e-08
Identities = 35/114 (30%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Frame = +3
Query: 33 NEHASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEK 212
N+ A+ K ++ IEDL+ +++G+VK+V G +I L R I A + I +LSD +++D +K
Sbjct: 1141 NDDATDKVIDSIEDLNRGDIIRGFVKNVANNGVYIALGRSIHALVRITDLSDSFLKDWKK 1200
Query: 213 EFPVGKLVIGRVISVEPLSKRVEVTLKTSTVSD----TSKSESMDLSKFHVGDL 362
F + +IG++ S + R+ +TLK S ++ K E +++ + G +
Sbjct: 1201 YFKPHQPIIGKISSCKE-EGRILMTLKESEINGELNVLKKFEDLEVGEIFEGSV 1253
[36][TOP]
>UniRef100_Q6BJC7 DEHA2G03410p n=1 Tax=Debaryomyces hansenii RepID=Q6BJC7_DEBHA
Length = 1716
Score = 62.4 bits (150), Expect = 2e-08
Identities = 35/114 (30%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Frame = +3
Query: 33 NEHASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEK 212
N+ A+ K ++ IEDL+ +++G+VK+V G +I L R I A + I +LSD +++D +K
Sbjct: 1141 NDDATDKVIDSIEDLNRGDIIRGFVKNVANNGVYIALGRSIHALVRITDLSDSFLKDWKK 1200
Query: 213 EFPVGKLVIGRVISVEPLSKRVEVTLKTSTVSD----TSKSESMDLSKFHVGDL 362
F + +IG++ S + R+ +TLK S ++ K E +++ + G +
Sbjct: 1201 YFKPHQPIIGKISSCKE-EGRILMTLKESEINGELNVLKKFEDLEVGEIFEGSV 1253
[37][TOP]
>UniRef100_C6H425 U3 snoRNP-associated protein Rrp5 n=1 Tax=Ajellomyces capsulatus H143
RepID=C6H425_AJECH
Length = 1781
Score = 62.0 bits (149), Expect = 2e-08
Identities = 29/89 (32%), Positives = 53/89 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ I + + +V+G+V+ V G F+ L + A + I +LSD Y+++ + EF V +LV
Sbjct: 1218 ISSISQIKVNDIVRGFVRRVADNGLFVTLGHDVTAYVRISDLSDSYLKEWQNEFQVNQLV 1277
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKS 323
GRVI +P S +++++LK S + K+
Sbjct: 1278 RGRVILADPESNKLQMSLKQSVLDPNYKT 1306
[38][TOP]
>UniRef100_C0NLW4 U3 snoRNP-associated protein Rrp5 n=1 Tax=Ajellomyces capsulatus
G186AR RepID=C0NLW4_AJECG
Length = 1817
Score = 62.0 bits (149), Expect = 2e-08
Identities = 29/89 (32%), Positives = 53/89 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ I + + +V+G+V+ V G F+ L + A + I +LSD Y+++ + EF V +LV
Sbjct: 1227 ISSISQIKVNDIVRGFVRRVADNGLFVTLGHDVTAYVRISDLSDSYLKEWQNEFQVNQLV 1286
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKS 323
GRVI +P S +++++LK S + K+
Sbjct: 1287 RGRVILADPESNKLQMSLKQSVLDPNYKT 1315
[39][TOP]
>UniRef100_B8MQ07 rRNA biogenesis protein RRP5, putative n=1 Tax=Talaromyces stipitatus
ATCC 10500 RepID=B8MQ07_TALSN
Length = 1810
Score = 62.0 bits (149), Expect = 2e-08
Identities = 29/89 (32%), Positives = 54/89 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ I+ L + +V+G+V+ V G F+ L + A + I +LSD Y+++ + EF +LV
Sbjct: 1215 ITSIDQLKVNDIVRGFVRKVADNGLFVTLGHSVSAYVRISDLSDSYLKEWKDEFQADQLV 1274
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKS 323
GR+I V+ +KR++++LK S + K+
Sbjct: 1275 KGRIIFVDQENKRLQMSLKESVLDSNYKT 1303
[40][TOP]
>UniRef100_A8PVH2 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966
RepID=A8PVH2_MALGO
Length = 1217
Score = 62.0 bits (149), Expect = 2e-08
Identities = 35/111 (31%), Positives = 59/111 (53%)
Frame = +3
Query: 33 NEHASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEK 212
N V+ L M ++G VK+VT G ++ L DAR++I L D+Y++D
Sbjct: 883 NASVDDPVVDSTAQLEIGMHIRGLVKAVTNHGVYVSLGPHTDARVMIKELFDEYVKDFRT 942
Query: 213 EFPVGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGDLI 365
+F VG+ V G ++ +EP + ++E++LK S + S SK H G+ +
Sbjct: 943 KFQVGQCVRGTILQIEP-NGQIELSLKKSRLEGVKPSAGA-WSKIHEGEKV 991
[41][TOP]
>UniRef100_A8IBR0 RNA binding rRNA processing protein n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IBR0_CHLRE
Length = 1280
Score = 61.6 bits (148), Expect = 3e-08
Identities = 35/89 (39%), Positives = 52/89 (58%)
Frame = +3
Query: 99 GYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLVIGRVISVEPLSKRV 278
GYVK KG F+ L R D RI + NLSD +IEDP FP G + RV+++E R+
Sbjct: 780 GYVKRCDAKGVFVALDRYRDGRIKLGNLSDGFIEDPAAAFPPGCRLEARVVALE-ADGRL 838
Query: 279 EVTLKTSTVSDTSKSESMDLSKFHVGDLI 365
E++L+T+ S +S + L++ G L+
Sbjct: 839 ELSLRTAPRSGSSGAAIQSLAELKEGQLV 867
[42][TOP]
>UniRef100_C1G573 rRNA biogenesis protein RRP5 n=1 Tax=Paracoccidioides brasiliensis
Pb18 RepID=C1G573_PARBD
Length = 1780
Score = 61.6 bits (148), Expect = 3e-08
Identities = 29/89 (32%), Positives = 55/89 (61%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
++ I L + +V+G+V+ V G F+ L ++ A + I +LSD Y++D + EF V +LV
Sbjct: 1192 IKSISQLKVNDIVRGFVRRVANNGLFVTLGHEVTAYVRISDLSDSYLKDWQSEFQVDQLV 1251
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKS 323
GR+I V+ + +++++LK S + K+
Sbjct: 1252 HGRIIFVDAEANKLQMSLKESVLEPNYKA 1280
[43][TOP]
>UniRef100_C0RZW5 rRNA biogenesis protein RRP5 n=1 Tax=Paracoccidioides brasiliensis
Pb03 RepID=C0RZW5_PARBP
Length = 1175
Score = 61.6 bits (148), Expect = 3e-08
Identities = 29/89 (32%), Positives = 55/89 (61%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
++ I L + +V+G+V+ V G F+ L ++ A + I +LSD Y++D + EF V +LV
Sbjct: 633 IKSISQLKVNDIVRGFVRRVANNGLFVTLGHEVTAYVRISDLSDSYLKDWQSEFQVDQLV 692
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKS 323
GR+I V+ + +++++LK S + K+
Sbjct: 693 HGRIIFVDAEANKLQMSLKESVLEPNYKA 721
[44][TOP]
>UniRef100_A4QSV3 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea
RepID=A4QSV3_MAGGR
Length = 1808
Score = 61.6 bits (148), Expect = 3e-08
Identities = 36/107 (33%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Frame = +3
Query: 3 LSPDSADVHSNEHASK-KCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPN 179
LS + V S+E K K + + + +++G+VK+V+ KG F+ L + A + I +
Sbjct: 1196 LSARESRVLSSELPVKDKEITSVSQIEQGTILRGFVKNVSDKGLFVTLGGDVTALVRISD 1255
Query: 180 LSDQYIEDPEKEFPVGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSK 320
LSD +++D ++ F V +LV GRV SV+ V+++LK S V + K
Sbjct: 1256 LSDAFLKDWKEHFQVDQLVKGRVTSVDKTLGHVQMSLKASAVDEDYK 1302
[45][TOP]
>UniRef100_B3SB29 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
RepID=B3SB29_TRIAD
Length = 927
Score = 61.2 bits (147), Expect = 3e-08
Identities = 32/108 (29%), Positives = 61/108 (56%)
Frame = +3
Query: 39 HASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEF 218
H+S + E+ ++ G++ SV GCFI + + LS QYIE+PE F
Sbjct: 522 HSSHVVITSYEEAQENVTAHGFISSVRSNGCFITFYNNVRGFVHKKYLSTQYIENPETVF 581
Query: 219 PVGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGDL 362
VG++V+ ++SV+ ++K++ ++LK ++ TS S ++ ++ V D+
Sbjct: 582 FVGQVVLTYIVSVDAVNKKLSLSLKPPALT-TSTSSNLKFNQSKVVDV 628
[46][TOP]
>UniRef100_B9WAR4 rRNA biogenesis protein, putative n=1 Tax=Candida dubliniensis CD36
RepID=B9WAR4_CANDC
Length = 1715
Score = 61.2 bits (147), Expect = 3e-08
Identities = 32/102 (31%), Positives = 59/102 (57%)
Frame = +3
Query: 15 SADVHSNEHASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQY 194
S + +N+ S K + + DL V+KG+VK+++ G ++ L R I A + + +LSD Y
Sbjct: 1128 SVSLRTNKPTSDKVINSVGDLTRGQVIKGFVKNISNNGVYVSLGRSIYALVRVSDLSDSY 1187
Query: 195 IEDPEKEFPVGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSK 320
++D + F + VIG++++ + R+ +TLK S V+ K
Sbjct: 1188 LKDWQNFFKPNQPVIGKIVNCKQ-EGRILMTLKESEVNGDLK 1228
[47][TOP]
>UniRef100_A4NBB9 Transcription elongation factor GreB n=1 Tax=Haemophilus influenzae
3655 RepID=A4NBB9_HAEIN
Length = 770
Score = 60.8 bits (146), Expect = 4e-08
Identities = 33/92 (35%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE+I DL P M+++G V +VT G F+ + D + I +LSD+++EDP + G +V
Sbjct: 642 VEEITDLKPGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGNIV 701
Query: 237 IGRVISVEPLSKRVEVTLK--TSTVSDTSKSE 326
+V+ V+ KR+ +T++ S V + SKS+
Sbjct: 702 KVKVLEVDVPRKRIALTMRLDESAVKNDSKSD 733
[48][TOP]
>UniRef100_C8VM81 rRNA biogenesis protein RRP5, putative (AFU_orthologue; AFUA_2G16040)
n=2 Tax=Emericella nidulans RepID=C8VM81_EMENI
Length = 1780
Score = 60.8 bits (146), Expect = 4e-08
Identities = 29/89 (32%), Positives = 57/89 (64%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ +E + + +++G+V+ V+ G F+ + I A I I +LSD Y+++ + F VG+LV
Sbjct: 1218 ITSMEQVKVNDIIRGFVRQVSDGGLFVTVGHNIVAFIRISDLSDSYLKEWKDSFQVGQLV 1277
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKS 323
GRV V+P +K+++++LK S + + K+
Sbjct: 1278 KGRVTLVDPENKKLQMSLKDSVLDPSYKA 1306
[49][TOP]
>UniRef100_C5PIZ6 S1 RNA binding domain containing protein n=1 Tax=Coccidioides
posadasii C735 delta SOWgp RepID=C5PIZ6_COCP7
Length = 1888
Score = 60.8 bits (146), Expect = 4e-08
Identities = 27/88 (30%), Positives = 54/88 (61%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ I+ L + +V+G+V+ + G F+ L + A + + +LSD Y+++ + EF + ++V
Sbjct: 1293 IASIDRLKVNDIVRGFVRRIADIGLFVTLGHNVTAYVRVSDLSDSYLKEWQDEFQIDQIV 1352
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSK 320
GR+ V+P +K+V++TLK S + K
Sbjct: 1353 RGRITLVDPEAKKVQMTLKQSALDPDYK 1380
[50][TOP]
>UniRef100_B6Q2D8 rRNA biogenesis protein RRP5, putative n=1 Tax=Penicillium marneffei
ATCC 18224 RepID=B6Q2D8_PENMQ
Length = 1807
Score = 60.8 bits (146), Expect = 4e-08
Identities = 29/89 (32%), Positives = 54/89 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ ++ L P+ VV+G+V+ V G F+ L + A I I +LSD ++++ + EF +LV
Sbjct: 1209 ITSMDQLKPNDVVRGFVRRVADNGLFVTLGHNVSAYIRISDLSDSFLKEWKDEFQTDQLV 1268
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKS 323
GR+I V+ + R++++LK S + K+
Sbjct: 1269 KGRIILVDSENNRLQMSLKESVLDPNFKT 1297
[51][TOP]
>UniRef100_A6S458 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana
B05.10 RepID=A6S458_BOTFB
Length = 1678
Score = 60.8 bits (146), Expect = 4e-08
Identities = 31/83 (37%), Positives = 50/83 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ I L + +V+G+VK V KG F+ L + A + I +LSD YI+D + EF V +LV
Sbjct: 1216 ISSISQLKVNDIVRGFVKHVADKGLFVNLGGNVTAYVRISDLSDSYIKDWKSEFQVDQLV 1275
Query: 237 IGRVISVEPLSKRVEVTLKTSTV 305
G+V V+ + V+++LK S +
Sbjct: 1276 KGKVTVVDEVLNHVQLSLKPSVI 1298
[52][TOP]
>UniRef100_O74835 rRNA biogenesis protein rrp5 n=1 Tax=Schizosaccharomyces pombe
RepID=RRP5_SCHPO
Length = 1690
Score = 60.8 bits (146), Expect = 4e-08
Identities = 29/90 (32%), Positives = 55/90 (61%)
Frame = +3
Query: 51 KCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGK 230
K + ++DL + +G+V +V +G F+ + + AR+ I L D +I+D + F V +
Sbjct: 1136 KEINSVDDLKIGDICRGFVCNVANQGLFVTIGHNLIARVKIGELFDTFIKDWKPHFHVNQ 1195
Query: 231 LVIGRVISVEPLSKRVEVTLKTSTVSDTSK 320
LV G ++ ++ SKR+E++LK S + D+S+
Sbjct: 1196 LVKGSIVGIDNDSKRIEMSLKQSKIKDSSE 1225
[53][TOP]
>UniRef100_Q5ALK0 Putative uncharacterized protein RRP5 n=1 Tax=Candida albicans
RepID=Q5ALK0_CANAL
Length = 1722
Score = 60.5 bits (145), Expect = 6e-08
Identities = 32/102 (31%), Positives = 59/102 (57%)
Frame = +3
Query: 15 SADVHSNEHASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQY 194
S + +++ S K + I DL V+KG+VK+++ G ++ L R I A + + +LSD Y
Sbjct: 1125 SVSLRTDKAGSDKVINSISDLTRGQVIKGFVKNISNNGVYVSLGRSIYALVRVSDLSDSY 1184
Query: 195 IEDPEKEFPVGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSK 320
++D + F + VIG++++ + R+ +TLK S V+ K
Sbjct: 1185 LKDWQNFFKPNQPVIGKIVNCKQ-EGRILMTLKESEVNGELK 1225
[54][TOP]
>UniRef100_C4YJK7 Putative uncharacterized protein n=1 Tax=Candida albicans
RepID=C4YJK7_CANAL
Length = 1726
Score = 60.5 bits (145), Expect = 6e-08
Identities = 32/102 (31%), Positives = 59/102 (57%)
Frame = +3
Query: 15 SADVHSNEHASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQY 194
S + +++ S K + I DL V+KG+VK+++ G ++ L R I A + + +LSD Y
Sbjct: 1129 SVSLRTDKAGSDKVINSISDLTRGQVIKGFVKNISNNGVYVSLGRSIYALVRVSDLSDSY 1188
Query: 195 IEDPEKEFPVGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSK 320
++D + F + VIG++++ + R+ +TLK S V+ K
Sbjct: 1189 LKDWQNFFKPNQPVIGKIVNCKQ-EGRILMTLKESEVNGELK 1229
[55][TOP]
>UniRef100_A7TIS6 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora
DSM 70294 RepID=A7TIS6_VANPO
Length = 1725
Score = 60.5 bits (145), Expect = 6e-08
Identities = 40/110 (36%), Positives = 62/110 (56%)
Frame = +3
Query: 33 NEHASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEK 212
NE AS ++ EDL VVK +K+VT KG F+ LS ++A + + LSD Y++D +K
Sbjct: 1164 NEKASNMKLKSHEDLKQKDVVKAIIKNVTEKGIFVYLSSALEAFVPVSKLSDSYLKDWKK 1223
Query: 213 EFPVGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGDL 362
+ + VIG+VIS + + + +TL+ S V+ K S VGD+
Sbjct: 1224 FYKPMQSVIGKVISCDD-NSHILLTLRESEVNGELK-VLKGYSDIKVGDI 1271
[56][TOP]
>UniRef100_Q0UD83 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
RepID=Q0UD83_PHANO
Length = 1794
Score = 60.1 bits (144), Expect = 8e-08
Identities = 28/83 (33%), Positives = 49/83 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+E L VV+G++K + G ++ L ++ + + NLSD YI+D + F V +LV
Sbjct: 1215 IEDKAQLKVHQVVRGFIKKIADNGVYVRLGPHVETYVRVSNLSDSYIKDWKSAFHVDQLV 1274
Query: 237 IGRVISVEPLSKRVEVTLKTSTV 305
G++IS + + ++TLKTST+
Sbjct: 1275 TGKIISNKEDQRNAQMTLKTSTI 1297
[57][TOP]
>UniRef100_C5FZ70 rRNA biogenesis protein RRP5 n=1 Tax=Microsporum canis CBS 113480
RepID=C5FZ70_NANOT
Length = 1819
Score = 60.1 bits (144), Expect = 8e-08
Identities = 31/103 (30%), Positives = 56/103 (54%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ I L +V+G+++ V G F+ L + A I + +LSD Y+++ + EF V +LV
Sbjct: 1231 ITSINQLRVGQIVRGFIRRVDNIGVFVTLGHNVSAYIRVSDLSDSYLKEWKDEFQVDQLV 1290
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGDLI 365
GR+ V+ S ++++TLK S + D + L VG ++
Sbjct: 1291 QGRITLVDKESNKIQMTLKKSAL-DPNYKPPFTLKDLKVGQIV 1332
[58][TOP]
>UniRef100_A5DPT1 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
RepID=A5DPT1_PICGU
Length = 1674
Score = 60.1 bits (144), Expect = 8e-08
Identities = 34/98 (34%), Positives = 58/98 (59%)
Frame = +3
Query: 15 SADVHSNEHASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQY 194
S + +N+ A K + +EDL VVKG+VK+V G ++ L R + + + +LSD Y
Sbjct: 1106 SVSLRTNK-AVDKVINSVEDLQRGDVVKGFVKNVANNGVYVSLGRSVHGLVRVSDLSDSY 1164
Query: 195 IEDPEKEFPVGKLVIGRVISVEPLSKRVEVTLKTSTVS 308
++D +K F + V+G+V++ + RV +TLK S V+
Sbjct: 1165 LKDWKKYFKQHQPVVGKVVNCKE-EGRVLITLKESEVN 1201
[59][TOP]
>UniRef100_A1C7U2 rRNA biogenesis protein RRP5, putative n=1 Tax=Aspergillus clavatus
RepID=A1C7U2_ASPCL
Length = 1819
Score = 60.1 bits (144), Expect = 8e-08
Identities = 30/103 (29%), Positives = 59/103 (57%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ ++ L + VV+G+VK V G F+ L + A + + +LSD Y+++ + F V +L+
Sbjct: 1222 ITSMKQLKVNDVVRGFVKRVADSGLFVALGHDVTAYVRVSDLSDSYLKEWKDSFQVDQLI 1281
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGDLI 365
GR+ V+P R+++TLK S + D + + ++ VG ++
Sbjct: 1282 KGRITLVDPEQGRLQMTLKESAL-DPNYKAPVTINDLKVGQIV 1323
[60][TOP]
>UniRef100_UPI000151BBE3 hypothetical protein PGUG_05282 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151BBE3
Length = 1674
Score = 59.7 bits (143), Expect = 1e-07
Identities = 32/89 (35%), Positives = 53/89 (59%)
Frame = +3
Query: 42 ASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFP 221
A K + +EDL VVKG+VK+V G ++ L R + + + +LSD Y++D +K F
Sbjct: 1114 AVDKVINSVEDLQRGDVVKGFVKNVANNGVYVSLGRSVHGLVRVSDLSDSYLKDWKKYFK 1173
Query: 222 VGKLVIGRVISVEPLSKRVEVTLKTSTVS 308
+ V+G+V++ + RV +TLK S V+
Sbjct: 1174 QHQPVVGKVVNCKE-EGRVLITLKESEVN 1201
[61][TOP]
>UniRef100_C4F779 DNA gyrase subunit B n=1 Tax=Haemophilus influenzae 6P18H1
RepID=C4F779_HAEIN
Length = 770
Score = 59.7 bits (143), Expect = 1e-07
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE+I DL P M+++G V +VT G F+ + D + I +LSD+++EDP + G +V
Sbjct: 642 VEEITDLKPGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGNIV 701
Query: 237 IGRVISVEPLSKRVEVTLK--TSTVSDTSKSE 326
+V+ V+ KR+ +T++ S V + KS+
Sbjct: 702 KVKVLEVDVSRKRIALTMRLDESAVKNDGKSD 733
[62][TOP]
>UniRef100_C1GZL0 rRNA biogenesis protein RRP5 n=1 Tax=Paracoccidioides brasiliensis
Pb01 RepID=C1GZL0_PARBA
Length = 1815
Score = 59.7 bits (143), Expect = 1e-07
Identities = 28/89 (31%), Positives = 55/89 (61%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
++ I L + +V+G+V+ V G F+ L ++ A + I +LSD Y+++ + EF V +LV
Sbjct: 1227 IKSISQLKVNDIVRGFVRRVANNGLFVTLGHEVTAYVRISDLSDSYLKEWQPEFQVDQLV 1286
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKS 323
GR+I V+ + +++++LK S + K+
Sbjct: 1287 RGRIIFVDAEANKLQMSLKESVLEPNYKA 1315
[63][TOP]
>UniRef100_B2W7W2 rRNA biogenesis protein RRP5 n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2W7W2_PYRTR
Length = 1760
Score = 59.7 bits (143), Expect = 1e-07
Identities = 29/92 (31%), Positives = 57/92 (61%)
Frame = +3
Query: 90 VVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLVIGRVISVEPLS 269
VV+G++K V G ++ L ++A + + +LSD+YI+D + F V +LV G++IS +
Sbjct: 1190 VVRGFIKHVASNGVYVRLGPHVEAYVRVSHLSDEYIKDWKSAFHVDQLVTGKIISNKEDQ 1249
Query: 270 KRVEVTLKTSTVSDTSKSESMDLSKFHVGDLI 365
+ +++LKTS + + +E ++ S VG ++
Sbjct: 1250 RNPQMSLKTSVIQG-NYTEPLEFSDLKVGQIV 1280
[64][TOP]
>UniRef100_C8ZF93 Rrp5p n=1 Tax=Saccharomyces cerevisiae EC1118 RepID=C8ZF93_YEAST
Length = 1729
Score = 59.3 bits (142), Expect = 1e-07
Identities = 30/93 (32%), Positives = 56/93 (60%)
Frame = +3
Query: 42 ASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFP 221
A + ++ EDL +V G VK+V KG F+ LSRK++A + + LSD Y+++ +K +
Sbjct: 1163 AKTRSIKSHEDLKQGEIVDGIVKNVNDKGIFVYLSRKVEAFVPVSKLSDSYLKEWKKFYK 1222
Query: 222 VGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSK 320
+ V+G+V++ + R+ +TL+ S ++ K
Sbjct: 1223 PMQYVLGKVVTCDE-DSRISLTLRESEINGDLK 1254
[65][TOP]
>UniRef100_C7GRC2 Rrp5p n=1 Tax=Saccharomyces cerevisiae JAY291 RepID=C7GRC2_YEAS2
Length = 1729
Score = 59.3 bits (142), Expect = 1e-07
Identities = 30/93 (32%), Positives = 56/93 (60%)
Frame = +3
Query: 42 ASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFP 221
A + ++ EDL +V G VK+V KG F+ LSRK++A + + LSD Y+++ +K +
Sbjct: 1163 AKTRSIKSHEDLKQGEIVDGIVKNVNDKGIFVYLSRKVEAFVPVSKLSDSYLKEWKKFYK 1222
Query: 222 VGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSK 320
+ V+G+V++ + R+ +TL+ S ++ K
Sbjct: 1223 PMQYVLGKVVTCDE-DSRISLTLRESEINGDLK 1254
[66][TOP]
>UniRef100_B5VPZ8 YMR229Cp-like protein n=1 Tax=Saccharomyces cerevisiae AWRI1631
RepID=B5VPZ8_YEAS6
Length = 1729
Score = 59.3 bits (142), Expect = 1e-07
Identities = 30/93 (32%), Positives = 56/93 (60%)
Frame = +3
Query: 42 ASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFP 221
A + ++ EDL +V G VK+V KG F+ LSRK++A + + LSD Y+++ +K +
Sbjct: 1163 AKTRSIKSHEDLKQGEIVDGIVKNVNDKGIFVYLSRKVEAFVPVSKLSDSYLKEWKKFYK 1222
Query: 222 VGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSK 320
+ V+G+V++ + R+ +TL+ S ++ K
Sbjct: 1223 PMQYVLGKVVTCDE-DSRISLTLRESEINGDLK 1254
[67][TOP]
>UniRef100_B3LMB7 rRNA biogenesis protein RRP5 n=1 Tax=Saccharomyces cerevisiae RM11-1a
RepID=B3LMB7_YEAS1
Length = 1729
Score = 59.3 bits (142), Expect = 1e-07
Identities = 30/93 (32%), Positives = 56/93 (60%)
Frame = +3
Query: 42 ASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFP 221
A + ++ EDL +V G VK+V KG F+ LSRK++A + + LSD Y+++ +K +
Sbjct: 1163 AKTRSIKSHEDLKQGEIVDGIVKNVNDKGIFVYLSRKVEAFVPVSKLSDSYLKEWKKFYK 1222
Query: 222 VGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSK 320
+ V+G+V++ + R+ +TL+ S ++ K
Sbjct: 1223 PMQYVLGKVVTCDE-DSRISLTLRESEINGDLK 1254
[68][TOP]
>UniRef100_B2AW90 Predicted CDS Pa_7_6350 n=1 Tax=Podospora anserina RepID=B2AW90_PODAN
Length = 1779
Score = 59.3 bits (142), Expect = 1e-07
Identities = 31/73 (42%), Positives = 51/73 (69%)
Frame = +3
Query: 90 VVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLVIGRVISVEPLS 269
V++G+VK+V+ KG F+ L I A + I NLSD Y++D ++ F + +LV GR+ISV +
Sbjct: 1210 VLRGFVKNVSDKGLFVTLGGDIVAMVQIKNLSDSYLKDWKEHFQIDQLVKGRIISVS--N 1267
Query: 270 KRVEVTLKTSTVS 308
R+E++L+ S +S
Sbjct: 1268 GRLEMSLRPSILS 1280
[69][TOP]
>UniRef100_A6ZMU1 U3 snoRNP protein n=1 Tax=Saccharomyces cerevisiae YJM789
RepID=A6ZMU1_YEAS7
Length = 1729
Score = 59.3 bits (142), Expect = 1e-07
Identities = 30/93 (32%), Positives = 56/93 (60%)
Frame = +3
Query: 42 ASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFP 221
A + ++ EDL +V G VK+V KG F+ LSRK++A + + LSD Y+++ +K +
Sbjct: 1163 AKTRSIKSHEDLKQGEIVDGIVKNVNDKGIFVYLSRKVEAFVPVSKLSDSYLKEWKKFYK 1222
Query: 222 VGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSK 320
+ V+G+V++ + R+ +TL+ S ++ K
Sbjct: 1223 PMQYVLGKVVTCDE-DSRISLTLRESEINGDLK 1254
[70][TOP]
>UniRef100_Q05022 rRNA biogenesis protein RRP5 n=1 Tax=Saccharomyces cerevisiae
RepID=RRP5_YEAST
Length = 1729
Score = 59.3 bits (142), Expect = 1e-07
Identities = 30/93 (32%), Positives = 56/93 (60%)
Frame = +3
Query: 42 ASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFP 221
A + ++ EDL +V G VK+V KG F+ LSRK++A + + LSD Y+++ +K +
Sbjct: 1163 AKTRSIKSHEDLKQGEIVDGIVKNVNDKGIFVYLSRKVEAFVPVSKLSDSYLKEWKKFYK 1222
Query: 222 VGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSK 320
+ V+G+V++ + R+ +TL+ S ++ K
Sbjct: 1223 PMQYVLGKVVTCDE-DSRISLTLRESEINGDLK 1254
[71][TOP]
>UniRef100_C4ZFN3 Transcription accessory protein n=1 Tax=Eubacterium rectale ATCC
33656 RepID=C4ZFN3_EUBR3
Length = 786
Score = 58.9 bits (141), Expect = 2e-07
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
V +++DL P MV+KG V++V GCF+ + D + I + D+YI+ P + VG +V
Sbjct: 634 VLEMKDLTPGMVLKGTVRNVIDFGCFVDIGVHQDGLVHISEICDRYIKHPLEAVSVGDIV 693
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSD-TSKSESMDLSK 344
+V+SV+ +R+++T+K +D KSE+ SK
Sbjct: 694 DVQVMSVDLKKQRIQLTMKIGQGTDKAGKSENSGSSK 730
[72][TOP]
>UniRef100_A5UH74 DNA gyrase subunit B n=1 Tax=Haemophilus influenzae PittGG
RepID=A5UH74_HAEIG
Length = 770
Score = 58.9 bits (141), Expect = 2e-07
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE+I DL P M+++G V +VT G F+ + D + I +LSD+++EDP + G +V
Sbjct: 642 VEEITDLKPGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK--TSTVSDTSKSE 326
+V+ V+ KR+ +T++ S V + KS+
Sbjct: 702 KVKVLEVDVPRKRIALTMRLDESAVKNDGKSD 733
[73][TOP]
>UniRef100_A0L2G1 RNA binding S1 domain protein n=1 Tax=Shewanella sp. ANA-3
RepID=A0L2G1_SHESA
Length = 779
Score = 58.9 bits (141), Expect = 2e-07
Identities = 30/94 (31%), Positives = 56/94 (59%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K VE+++DL P+M+++G V +VT G F+ + D + I +L+D++I DP G
Sbjct: 640 KDGVEELKDLKPEMILEGVVTNVTNFGAFVDIGVHQDGLVHISSLTDKFITDPHTVVKAG 699
Query: 228 KLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSES 329
+V +V+ V+ +R+ ++++ D SKS+S
Sbjct: 700 DVVKVKVMEVDVERRRIGLSMRLDEAIDQSKSQS 733
[74][TOP]
>UniRef100_A0KF15 S1 RNA binding domain protein n=1 Tax=Aeromonas hydrophila subsp.
hydrophila ATCC 7966 RepID=A0KF15_AERHH
Length = 834
Score = 58.9 bits (141), Expect = 2e-07
Identities = 29/82 (35%), Positives = 52/82 (63%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K+ VEKI DL P+MV++G V +VT G F+ + D + I +L+D++++DP + G
Sbjct: 703 KEGVEKISDLVPEMVLEGVVTNVTNFGAFVDIGVHQDGLVHISSLTDRFVKDPREVVKAG 762
Query: 228 KLVIGRVISVEPLSKRVEVTLK 293
+V +V+ V+ KR+ +T++
Sbjct: 763 DIVRVKVLEVDVPRKRISLTMR 784
[75][TOP]
>UniRef100_A4NQK4 Transcription elongation factor GreB n=1 Tax=Haemophilus influenzae
PittII RepID=A4NQK4_HAEIN
Length = 770
Score = 58.9 bits (141), Expect = 2e-07
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE+I DL M+++G V +VT G F+ + D + I +LSD+++EDP + G +V
Sbjct: 642 VEEITDLKSGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGNIV 701
Query: 237 IGRVISVEPLSKRVEVTLK--TSTVSDTSKSE 326
+V+ V+ L KR+ +T++ S V + KS+
Sbjct: 702 KVKVLEVDVLRKRIALTMRLDESAVKNDGKSD 733
[76][TOP]
>UniRef100_C5JCU2 rRNA biogenesis protein RRP5 n=1 Tax=Ajellomyces dermatitidis
SLH14081 RepID=C5JCU2_AJEDS
Length = 1817
Score = 58.9 bits (141), Expect = 2e-07
Identities = 29/89 (32%), Positives = 52/89 (58%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ I L + +V+G+V+ V G F+ L + A I I +LSD Y+++ + EF V +LV
Sbjct: 1227 INSISQLKVNDIVRGFVRRVANNGLFVTLGHDVTAYIRISDLSDSYLKEWQNEFQVDQLV 1286
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKS 323
GR+I + S +++++LK S + K+
Sbjct: 1287 RGRIILADAESNKLQMSLKESVLEPNYKT 1315
[77][TOP]
>UniRef100_C5GN19 rRNA biogenesis protein RRP5 n=1 Tax=Ajellomyces dermatitidis ER-3
RepID=C5GN19_AJEDR
Length = 1811
Score = 58.9 bits (141), Expect = 2e-07
Identities = 29/89 (32%), Positives = 52/89 (58%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ I L + +V+G+V+ V G F+ L + A I I +LSD Y+++ + EF V +LV
Sbjct: 1227 INSISQLKVNDIVRGFVRRVANNGLFVTLGHDVTAYIRISDLSDSYLKEWQNEFQVDQLV 1286
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKS 323
GR+I + S +++++LK S + K+
Sbjct: 1287 RGRIILADAESNKLQMSLKESVLEPNYKT 1315
[78][TOP]
>UniRef100_A4ST13 Protein yhgF n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449
RepID=A4ST13_AERS4
Length = 768
Score = 58.5 bits (140), Expect = 2e-07
Identities = 28/82 (34%), Positives = 51/82 (62%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K VEKI DL P+M+++G V +VT G F+ + D + I +L+D++++DP + G
Sbjct: 637 KDGVEKISDLAPEMILEGVVTNVTNFGAFVDIGVHQDGLVHISSLTDRFVKDPREVVKAG 696
Query: 228 KLVIGRVISVEPLSKRVEVTLK 293
+V +V+ V+ KR+ +T++
Sbjct: 697 DIVRVKVLEVDAPRKRISLTMR 718
[79][TOP]
>UniRef100_Q7SB69 Putative uncharacterized protein n=1 Tax=Neurospora crassa
RepID=Q7SB69_NEUCR
Length = 1774
Score = 58.5 bits (140), Expect = 2e-07
Identities = 31/72 (43%), Positives = 50/72 (69%)
Frame = +3
Query: 90 VVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLVIGRVISVEPLS 269
+V+G+VK+V+ KG F+ L + A + I NLSD Y++ +++F V +LV GR+ISV +
Sbjct: 1203 IVRGFVKNVSDKGLFVTLGGTVTAFVQIKNLSDAYLKYWKEQFQVDQLVKGRIISV--AN 1260
Query: 270 KRVEVTLKTSTV 305
R+E++LK S V
Sbjct: 1261 GRIEMSLKPSVV 1272
[80][TOP]
>UniRef100_C4JL55 Putative uncharacterized protein n=1 Tax=Uncinocarpus reesii 1704
RepID=C4JL55_UNCRE
Length = 1819
Score = 58.5 bits (140), Expect = 2e-07
Identities = 29/103 (28%), Positives = 59/103 (57%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ ++ L +V+G+V+ V G F++L + A + + +LSD Y+++ + EF V ++V
Sbjct: 1221 ITSVDKLKVGDIVRGFVRKVADVGLFVMLGHNVTAYVRVSDLSDAYLKEWQDEFQVDQIV 1280
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGDLI 365
GR+ V+ + +V++TLK S + D + + LS G ++
Sbjct: 1281 RGRITLVDTEAGKVQMTLKQSAL-DPNYKPPLQLSDLKQGQIV 1322
[81][TOP]
>UniRef100_A6RCC1 Putative uncharacterized protein n=1 Tax=Ajellomyces capsulatus
NAm1 RepID=A6RCC1_AJECN
Length = 566
Score = 58.5 bits (140), Expect = 2e-07
Identities = 28/89 (31%), Positives = 52/89 (58%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ I + + +V+G+V+ V G F+ L + A + I +LSD Y+++ + EF V +LV
Sbjct: 18 ISSISQIKVNDIVRGFVRRVADNGLFVTLGHNVIAYVRISDLSDSYLKEWQNEFQVNQLV 77
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKS 323
GRVI + S +++++LK S + K+
Sbjct: 78 RGRVILADAESNKLQMSLKESVLDPNYKT 106
[82][TOP]
>UniRef100_Q752K8 AFR566Cp n=1 Tax=Eremothecium gossypii RepID=Q752K8_ASHGO
Length = 1716
Score = 58.2 bits (139), Expect = 3e-07
Identities = 32/95 (33%), Positives = 57/95 (60%)
Frame = +3
Query: 36 EHASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKE 215
E A+ + + +DL VV+G++KSVT KG F+ LSR + A + + L+D YI++ +K
Sbjct: 1144 EDATDRYILSHKDLKQGDVVRGFIKSVTDKGIFVYLSRTLQAFVPVSKLTDAYIKEWKKF 1203
Query: 216 FPVGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSK 320
+ + + G+V++ E R+ +T+K S V+ K
Sbjct: 1204 YKTMQPITGKVVNCES-DSRILLTMKESEVNGELK 1237
[83][TOP]
>UniRef100_Q2H9L7 Putative uncharacterized protein n=1 Tax=Chaetomium globosum
RepID=Q2H9L7_CHAGB
Length = 1766
Score = 58.2 bits (139), Expect = 3e-07
Identities = 34/94 (36%), Positives = 56/94 (59%)
Frame = +3
Query: 24 VHSNEHASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIED 203
++S+ K V K L +++G+V++V+ KG F+ L + A + I NLSD Y++D
Sbjct: 1162 LNSSLPVKDKEVTKNTKLEVGDIIRGFVRNVSDKGLFVSLGGDLVALVKIKNLSDSYLKD 1221
Query: 204 PEKEFPVGKLVIGRVISVEPLSKRVEVTLKTSTV 305
++ + V +LV GR+ISV R+E+ LK S V
Sbjct: 1222 WKEHYQVDQLVKGRIISV--AEGRIELNLKPSVV 1253
[84][TOP]
>UniRef100_Q1EAT9 Putative uncharacterized protein n=1 Tax=Coccidioides immitis
RepID=Q1EAT9_COCIM
Length = 1829
Score = 58.2 bits (139), Expect = 3e-07
Identities = 27/88 (30%), Positives = 53/88 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ I+ L + +V+G+V+ V G F+ L + A + + +LSD Y+++ + EF + ++V
Sbjct: 1234 IASIDRLKVNDIVRGFVRRVADIGLFVTLGHNVTAYVRVSDLSDSYLKEWQDEFQIDQIV 1293
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSK 320
GR+ V+ +K+V++TLK S + K
Sbjct: 1294 RGRITLVDTEAKKVQMTLKQSALDPDYK 1321
[85][TOP]
>UniRef100_A1DIG4 RRNA biogenesis protein RRP5, putative n=1 Tax=Neosartorya fischeri
NRRL 181 RepID=A1DIG4_NEOFI
Length = 1819
Score = 58.2 bits (139), Expect = 3e-07
Identities = 32/103 (31%), Positives = 57/103 (55%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ ++ L + VV+G+VK V G F+ L + A + + +LSD Y+++ + F V +LV
Sbjct: 1222 ITSMKQLKVNDVVRGFVKRVADSGLFVTLGHDVTAYVRVSDLSDSYLKEWKDSFQVDQLV 1281
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGDLI 365
GRV V+P R++++LK S V D + + VG ++
Sbjct: 1282 KGRVTVVDPEQGRLQMSLKES-VLDPEYKAPITMHDLKVGQVV 1323
[86][TOP]
>UniRef100_UPI000045E8C6 COG2183: Transcriptional accessory protein n=1 Tax=Haemophilus
influenzae R2846 RepID=UPI000045E8C6
Length = 772
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE+I DL M+++G V +VT G F+ + D + I +LSD+++EDP + G +V
Sbjct: 644 VEEITDLKSGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGNIV 703
Query: 237 IGRVISVEPLSKRVEVTLK--TSTVSDTSKSE 326
+V+ V+ KR+ +T++ S V + SKS+
Sbjct: 704 KVKVLEVDVPRKRIALTMRLDESAVKNDSKSD 735
[87][TOP]
>UniRef100_Q4QMX7 Predicted transcriptional accessory protein n=1 Tax=Haemophilus
influenzae 86-028NP RepID=Q4QMX7_HAEI8
Length = 770
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE+I DL M+++G V +VT G F+ + D + I +LSD+++EDP + G +V
Sbjct: 642 VEEITDLKSGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPLQVVKTGNIV 701
Query: 237 IGRVISVEPLSKRVEVTLK--TSTVSDTSKSE 326
+V+ V+ L KR+ +T++ S V + KS+
Sbjct: 702 KVKVLEVDVLRKRIALTMRLDESAVKNDGKSD 733
[88][TOP]
>UniRef100_A5U9S2 Transcription elongation factor GreB n=1 Tax=Haemophilus influenzae
PittEE RepID=A5U9S2_HAEIE
Length = 770
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE+I DL M+++G V +VT G F+ + D + I +LSD+++EDP + G +V
Sbjct: 642 VEEITDLKSGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGNIV 701
Query: 237 IGRVISVEPLSKRVEVTLK--TSTVSDTSKSE 326
+V+ V+ KR+ +T++ S V + SKS+
Sbjct: 702 KVKVLEVDVPRKRIALTMRLDESAVKNDSKSD 733
[89][TOP]
>UniRef100_Q19V19 HI0568-like protein n=1 Tax=Haemophilus influenzae
RepID=Q19V19_HAEIN
Length = 770
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE+I DL M+++G V +VT G F+ + D + I +LSD+++EDP + G +V
Sbjct: 642 VEEITDLKSGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGNIV 701
Query: 237 IGRVISVEPLSKRVEVTLK--TSTVSDTSKSE 326
+V+ V+ KR+ +T++ S V + SKS+
Sbjct: 702 KVKVLEVDVPRKRIALTMRLDESAVKNDSKSD 733
[90][TOP]
>UniRef100_P71353 Uncharacterized protein HI0568 n=2 Tax=Haemophilus influenzae
RepID=Y568_HAEIN
Length = 762
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE+I DL M+++G V +VT G F+ + D + I +LSD+++EDP + G +V
Sbjct: 642 VEEITDLKSGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGNIV 701
Query: 237 IGRVISVEPLSKRVEVTLK--TSTVSDTSKSE 326
+V+ V+ KR+ +T++ S V + SKS+
Sbjct: 702 KVKVLEVDVPRKRIALTMRLDESAVKNDSKSD 733
[91][TOP]
>UniRef100_C9MDF9 Transcriptional accessory protein n=1 Tax=Haemophilus influenzae
NT127 RepID=C9MDF9_HAEIN
Length = 770
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE+I DL M+++G V +VT G F+ + D + I +LSD+++EDP + G +V
Sbjct: 642 VEEITDLKSGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGNIV 701
Query: 237 IGRVISVEPLSKRVEVTLK--TSTVSDTSKSE 326
+V+ V+ KR+ +T++ S V + SKS+
Sbjct: 702 KVKVLDVDVPRKRIALTMRLDESAVKNDSKSD 733
[92][TOP]
>UniRef100_C4EZU3 Transcription elongation factor GreB n=1 Tax=Haemophilus influenzae
7P49H1 RepID=C4EZU3_HAEIN
Length = 770
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE+I DL M+++G V +VT G F+ + D + I +LSD+++EDP + G +V
Sbjct: 642 VEEITDLKSGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGNIV 701
Query: 237 IGRVISVEPLSKRVEVTLK--TSTVSDTSKSE 326
+V+ V+ KR+ +T++ S V + SKS+
Sbjct: 702 KVKVLEVDVPRKRIALTMRLDESAVKNDSKSD 733
[93][TOP]
>UniRef100_A4NUZ6 DNA gyrase subunit B n=1 Tax=Haemophilus influenzae 22.4-21
RepID=A4NUZ6_HAEIN
Length = 770
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE+I DL M+++G V +VT G F+ + D + I +LSD+++EDP + G +V
Sbjct: 642 VEEITDLKSGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGNIV 701
Query: 237 IGRVISVEPLSKRVEVTLK--TSTVSDTSKSE 326
+V+ V+ KR+ +T++ S V + SKS+
Sbjct: 702 KVKVLEVDVPRKRIALTMRLDESAVKNDSKSD 733
[94][TOP]
>UniRef100_A4NGR2 Transcription elongation factor GreB n=1 Tax=Haemophilus influenzae
PittAA RepID=A4NGR2_HAEIN
Length = 770
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE+I DL M+++G V +VT G F+ + D + I +LSD+++EDP + G +V
Sbjct: 642 VEEITDLKSGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGNIV 701
Query: 237 IGRVISVEPLSKRVEVTLK--TSTVSDTSKSE 326
+V+ V+ KR+ +T++ S V + SKS+
Sbjct: 702 KVKVLEVDVPRKRIALTMRLDESAVKNDSKSD 733
[95][TOP]
>UniRef100_A4N6H7 Transcription elongation factor GreB n=1 Tax=Haemophilus influenzae
R3021 RepID=A4N6H7_HAEIN
Length = 770
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE+I DL M+++G V +VT G F+ + D + I +LSD+++EDP + G +V
Sbjct: 642 VEEITDLKSGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGNIV 701
Query: 237 IGRVISVEPLSKRVEVTLK--TSTVSDTSKSE 326
+V+ V+ KR+ +T++ S V + SKS+
Sbjct: 702 KVKVLEVDVPRKRIALTMRLDESAVKNDSKSD 733
[96][TOP]
>UniRef100_A4MYL4 Predicted transcriptional accessory protein n=1 Tax=Haemophilus
influenzae 22.1-21 RepID=A4MYL4_HAEIN
Length = 648
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE+I DL M+++G V +VT G F+ + D + I +LSD+++EDP + G +V
Sbjct: 520 VEEITDLKSGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGNIV 579
Query: 237 IGRVISVEPLSKRVEVTLK--TSTVSDTSKSE 326
+V+ V+ KR+ +T++ S V + SKS+
Sbjct: 580 KVKVLEVDVPRKRIALTMRLDESAVKNDSKSD 611
[97][TOP]
>UniRef100_A4A335 S1 RNA binding domain protein n=1 Tax=Congregibacter litoralis KT71
RepID=A4A335_9GAMM
Length = 792
Score = 57.8 bits (138), Expect = 4e-07
Identities = 29/90 (32%), Positives = 55/90 (61%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VEKI DL PDMV++G V +VT G F+ + D + I +++++++DP G +V
Sbjct: 642 VEKITDLKPDMVLEGTVTNVTSFGAFVDVGVHQDGLVHISAMAEKFVKDPRDVAKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKSE 326
+V+S++ KRV ++++ S ++ S+ +
Sbjct: 702 TVKVMSIDVERKRVGLSMRLSDSAEDSQQD 731
[98][TOP]
>UniRef100_Q4WZR4 RRNA biogenesis protein RRP5, putative n=1 Tax=Aspergillus fumigatus
RepID=Q4WZR4_ASPFU
Length = 1822
Score = 57.8 bits (138), Expect = 4e-07
Identities = 29/89 (32%), Positives = 52/89 (58%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ ++ L + VV+G+VK V G F+ L + A + + +LSD Y+++ + F V +LV
Sbjct: 1222 ITSMKQLKVNDVVRGFVKRVADSGLFVTLGHDVTAYVRVSDLSDSYLKEWKDSFQVDQLV 1281
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKS 323
GRV V+P R++++LK S + K+
Sbjct: 1282 KGRVTVVDPEQGRLQMSLKESVLDPEYKA 1310
[99][TOP]
>UniRef100_B0XUX0 rRNA biogenesis protein RRP5, putative n=1 Tax=Aspergillus fumigatus
A1163 RepID=B0XUX0_ASPFC
Length = 1822
Score = 57.8 bits (138), Expect = 4e-07
Identities = 29/89 (32%), Positives = 52/89 (58%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ ++ L + VV+G+VK V G F+ L + A + + +LSD Y+++ + F V +LV
Sbjct: 1222 ITSMKQLKVNDVVRGFVKRVADSGLFVTLGHDVTAYVRVSDLSDSYLKEWKDSFQVDQLV 1281
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKS 323
GRV V+P R++++LK S + K+
Sbjct: 1282 KGRVTVVDPEQGRLQMSLKESVLDPEYKA 1310
[100][TOP]
>UniRef100_A4NNU5 DNA gyrase subunit B n=1 Tax=Haemophilus influenzae PittHH
RepID=A4NNU5_HAEIN
Length = 770
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE+I DL M+++G V +VT G F+ + D + I +LSD+++EDP + G +V
Sbjct: 642 VEEITDLKSGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGNIV 701
Query: 237 IGRVISVEPLSKRVEVTLK--TSTVSDTSKSE 326
+V+ V+ KR+ +T++ S V + SKS+
Sbjct: 702 KIKVLEVDVPRKRIALTMRLDESAVKNDSKSD 733
[101][TOP]
>UniRef100_Q2UDF1 rRNA processing protein Rrp5 n=1 Tax=Aspergillus oryzae
RepID=Q2UDF1_ASPOR
Length = 1827
Score = 57.4 bits (137), Expect = 5e-07
Identities = 28/89 (31%), Positives = 51/89 (57%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ +E + + VV+G+V+ V G F+ L + A + + +LSD Y+++ + F V +LV
Sbjct: 1232 ITSMEQVKVNDVVRGFVRKVADNGLFVTLGHGVTAYVRVSDLSDSYLKEWKDSFQVDQLV 1291
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKS 323
GRV V+P R+++ LK S + K+
Sbjct: 1292 KGRVTVVDPEQGRLQICLKESVLDPNYKA 1320
[102][TOP]
>UniRef100_B8N5Y3 rRNA biogenesis protein RRP5, putative n=1 Tax=Aspergillus flavus
NRRL3357 RepID=B8N5Y3_ASPFN
Length = 1827
Score = 57.4 bits (137), Expect = 5e-07
Identities = 28/89 (31%), Positives = 51/89 (57%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ +E + + VV+G+V+ V G F+ L + A + + +LSD Y+++ + F V +LV
Sbjct: 1232 ITSMEQVKVNDVVRGFVRKVADNGLFVTLGHGVTAYVRVSDLSDSYLKEWKDSFQVDQLV 1291
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKS 323
GRV V+P R+++ LK S + K+
Sbjct: 1292 KGRVTVVDPEQGRLQICLKESVLDPNYKA 1320
[103][TOP]
>UniRef100_Q0HDJ5 RNA binding S1 domain protein n=1 Tax=Shewanella sp. MR-4
RepID=Q0HDJ5_SHESM
Length = 779
Score = 57.0 bits (136), Expect = 6e-07
Identities = 29/99 (29%), Positives = 58/99 (58%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K VE+++DL P+M+++G V +VT G F+ + D + I +L+D++I DP G
Sbjct: 640 KDGVEELKDLKPEMILEGVVTNVTNFGAFVDIGVHQDGLVHISSLTDKFITDPHTVVKAG 699
Query: 228 KLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSK 344
+V +V+ V+ +R+ ++++ D SK+++ S+
Sbjct: 700 DVVKVKVMEVDVERRRIGLSMRLDEAIDQSKAQTRSPSQ 738
[104][TOP]
>UniRef100_B8CUZ4 RNA binding S1 n=1 Tax=Shewanella piezotolerans WP3
RepID=B8CUZ4_SHEPW
Length = 777
Score = 57.0 bits (136), Expect = 6e-07
Identities = 27/82 (32%), Positives = 52/82 (63%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K+ VE+I DL PDM+++G V +VT G F+ + D + I +++D++I+DP K G
Sbjct: 640 KEGVEQINDLKPDMILEGVVTNVTNFGAFVDVGVHQDGLVHISSMTDKFIDDPHKVVKAG 699
Query: 228 KLVIGRVISVEPLSKRVEVTLK 293
+V +V+ V+ +R+ ++++
Sbjct: 700 DIVKVKVMEVDAERRRIGLSMR 721
[105][TOP]
>UniRef100_A4G9E0 Putative transcription accessory protein TEX n=1 Tax=Herminiimonas
arsenicoxydans RepID=A4G9E0_HERAR
Length = 780
Score = 57.0 bits (136), Expect = 6e-07
Identities = 29/93 (31%), Positives = 53/93 (56%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K VE+I DL PDM+++G V +V G F+ + D + I LS+ +++DP G
Sbjct: 651 KDGVEEIRDLRPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTFVKDPHTVVKAG 710
Query: 228 KLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSE 326
++V +V+ V+ KR+ +T++ S + + S+
Sbjct: 711 QVVKVKVLEVDEKRKRIALTMRLSDAAPVAGSK 743
[106][TOP]
>UniRef100_C3XCB3 Tex transcriptional accessory protein n=1 Tax=Oxalobacter
formigenes OXCC13 RepID=C3XCB3_OXAFO
Length = 784
Score = 57.0 bits (136), Expect = 6e-07
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE I+DL PDM+++G V +VT G F+ + D + I LSD++++DP + G++V
Sbjct: 659 VEDIKDLRPDMILEGVVTNVTAFGAFVDIGVHQDGLVHISALSDKFVKDPHQVVSTGQVV 718
Query: 237 IGRVISVEPLSKRVEVTL 290
+V+ V+ +R+ +T+
Sbjct: 719 RVKVVEVDLQRRRIALTM 736
[107][TOP]
>UniRef100_Q23TZ6 S1 RNA binding domain containing protein n=1 Tax=Tetrahymena
thermophila SB210 RepID=Q23TZ6_TETTH
Length = 2060
Score = 57.0 bits (136), Expect = 6e-07
Identities = 33/90 (36%), Positives = 48/90 (53%)
Frame = +3
Query: 87 MVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLVIGRVISVEPL 266
MV GY+ KGCFI + + R + LSD++I P+ F KLV+GR+I ++
Sbjct: 1410 MVFVGYINQTNDKGCFIKIGQDTVVRASLNELSDEHIAKPQTHFYQNKLVVGRIIQIKED 1469
Query: 267 SKRVEVTLKTSTVSDTSKSESMDLSKFHVG 356
K +E +L+ S + SMD SK VG
Sbjct: 1470 GK-IEASLRESVI---KYGYSMDDSKLQVG 1495
[108][TOP]
>UniRef100_Q8E8N3 Putative uncharacterized protein n=1 Tax=Shewanella oneidensis
RepID=Q8E8N3_SHEON
Length = 784
Score = 56.6 bits (135), Expect = 8e-07
Identities = 28/94 (29%), Positives = 56/94 (59%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K VE+++DL P+M+++G V +VT G F+ + D + I +L+D++I DP G
Sbjct: 640 KDGVEELKDLKPEMILEGVVTNVTNFGAFVDIGVHQDGLVHISSLTDKFITDPHTVVKAG 699
Query: 228 KLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSES 329
+V +V+ V+ +R+ ++++ D SK+++
Sbjct: 700 DVVKVKVMEVDVERRRIGLSMRLDEAIDQSKTQT 733
[109][TOP]
>UniRef100_Q3IJN6 Conserved protein with nucleic acid-binding protein-like domain
(Transcriptional accessory protein) n=1
Tax=Pseudoalteromonas haloplanktis TAC125
RepID=Q3IJN6_PSEHT
Length = 774
Score = 56.6 bits (135), Expect = 8e-07
Identities = 29/90 (32%), Positives = 50/90 (55%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K VEKI DL P M+++G V +V G F+ + D + I ++++++I DP + G
Sbjct: 637 KAGVEKISDLKPGMILEGVVSNVANFGAFVDVGVHQDGLVHISSITNKFISDPREVVKAG 696
Query: 228 KLVIGRVISVEPLSKRVEVTLKTSTVSDTS 317
+V +V+ V+ KR+ T++ DTS
Sbjct: 697 DIVKVKVVEVDAARKRISFTMRLDDDIDTS 726
[110][TOP]
>UniRef100_Q0HPU3 RNA binding S1 domain protein n=1 Tax=Shewanella sp. MR-7
RepID=Q0HPU3_SHESR
Length = 779
Score = 56.6 bits (135), Expect = 8e-07
Identities = 28/94 (29%), Positives = 56/94 (59%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K VE+++DL P+M+++G V +VT G F+ + D + I +L+D++I DP G
Sbjct: 640 KDGVEELKDLKPEMILEGVVTNVTNFGAFVDIGVHQDGLVHISSLTDKFITDPHTVVKAG 699
Query: 228 KLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSES 329
+V +V+ V+ +R+ ++++ D SK+++
Sbjct: 700 DVVKVKVMEVDVERRRIGLSMRLDEAIDQSKAQT 733
[111][TOP]
>UniRef100_C9PPH0 YhgF like protein n=1 Tax=Pasteurella dagmatis ATCC 43325
RepID=C9PPH0_9PAST
Length = 771
Score = 56.6 bits (135), Expect = 8e-07
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE+I DL MV++G V +VT G F+ + D + I +LSD+++EDP + G +V
Sbjct: 642 VEEISDLKAGMVLEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGDIV 701
Query: 237 IGRVISVEPLSKRVEVT--LKTSTVSDTSKSE 326
+V+ V+ KR+ +T L+ S V ++ K++
Sbjct: 702 KVKVLEVDVPRKRIALTMRLEESAVKNSDKTD 733
[112][TOP]
>UniRef100_UPI000194C80A PREDICTED: programmed cell death 11 n=1 Tax=Taeniopygia guttata
RepID=UPI000194C80A
Length = 1885
Score = 56.2 bits (134), Expect = 1e-06
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDP---EKEFPVG 227
+ I+D+ +V+GYVKS+TP G F LS + RIL N+S +++ +K P G
Sbjct: 1361 ITSIKDVKKGQLVRGYVKSITPSGVFFGLSTSLLGRILFQNVSPYFVQKHSLYKKYLPEG 1420
Query: 228 KLVIGRVISVEPLSKRVEVTL 290
KL+ +V+ V K +E++L
Sbjct: 1421 KLLTAKVLGVNRKEKHIELSL 1441
[113][TOP]
>UniRef100_UPI0000E80836 PREDICTED: similar to KIAA0185 n=1 Tax=Gallus gallus
RepID=UPI0000E80836
Length = 1826
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Frame = +3
Query: 66 IEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDP---EKEFPVGKLV 236
I+D+ +V+GYVKSVTP G F LS + RIL N+S +++ EK P GKL+
Sbjct: 1271 IKDVKKGQLVRGYVKSVTPSGVFFGLSASLLGRILFQNVSPYFVQKHSLYEKYLPEGKLL 1330
Query: 237 IGRVISVEPLSKRVEVTL 290
+V+ V VE++L
Sbjct: 1331 TAKVLDVNKKENHVELSL 1348
[114][TOP]
>UniRef100_UPI0000ECB549 RRP5 protein homolog (Programmed cell death protein 11). n=1
Tax=Gallus gallus RepID=UPI0000ECB549
Length = 1841
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Frame = +3
Query: 66 IEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDP---EKEFPVGKLV 236
I+D+ +V+GYVKSVTP G F LS + RIL N+S +++ EK P GKL+
Sbjct: 1319 IKDVKKGQLVRGYVKSVTPSGVFFGLSASLLGRILFQNVSPYFVQKHSLYEKYLPEGKLL 1378
Query: 237 IGRVISVEPLSKRVEVTL 290
+V+ V VE++L
Sbjct: 1379 TAKVLDVNKKENHVELSL 1396
[115][TOP]
>UniRef100_Q7N9V1 Similar to unknown protein YhgF of Escherichia coli n=1
Tax=Photorhabdus luminescens subsp. laumondii
RepID=Q7N9V1_PHOLL
Length = 776
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/79 (35%), Positives = 48/79 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DLHP MV++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 641 VETMNDLHPGMVLEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNRFVEDPHTVVKAGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 701 KVKVLEVDLNRKRIALTMR 719
[116][TOP]
>UniRef100_A6T356 Tex transcriptional accessory protein n=1 Tax=Janthinobacterium sp.
Marseille RepID=A6T356_JANMA
Length = 782
Score = 56.2 bits (134), Expect = 1e-06
Identities = 29/93 (31%), Positives = 53/93 (56%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K VE+I DL PDM+++G V +V G F+ + D + I LS+ +++DP G
Sbjct: 651 KDGVEEIRDLRPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTFVKDPHTVVKAG 710
Query: 228 KLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSE 326
++V +V+ V+ KR+ +T++ S + + S+
Sbjct: 711 QVVKVKVLEVDEKRKRIALTMRLSDSAPVAGSK 743
[117][TOP]
>UniRef100_C3WF64 Transcription accessory protein n=1 Tax=Fusobacterium mortiferum
ATCC 9817 RepID=C3WF64_FUSMR
Length = 721
Score = 56.2 bits (134), Expect = 1e-06
Identities = 29/82 (35%), Positives = 50/82 (60%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K + KIE+L P M ++G V++V G FI + K DA + I +S+++I+DP K VG
Sbjct: 638 KSDILKIENLQPGMEIEGTVRNVVKFGAFIDIGLKNDALLHISEISNKFIDDPSKVLSVG 697
Query: 228 KLVIGRVISVEPLSKRVEVTLK 293
+++ R+ ++ +RV +T K
Sbjct: 698 QIIKVRIKDIDKERERVGLTKK 719
[118][TOP]
>UniRef100_C4XXI6 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4XXI6_CLAL4
Length = 1677
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/98 (28%), Positives = 57/98 (58%)
Frame = +3
Query: 15 SADVHSNEHASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQY 194
S + + + A K V I +LH VVKG++K++ G ++ L R + A + + N+SD +
Sbjct: 1103 SVSLRNEKTAKDKPVNSISELHRGDVVKGFIKAINNAGLYVSLGRDLFALVPVSNISDAF 1162
Query: 195 IEDPEKEFPVGKLVIGRVISVEPLSKRVEVTLKTSTVS 308
+ D +K F + ++G+++ + + R+ +TLK S ++
Sbjct: 1163 LVDWKKFFKPFQSIVGKIVQCK-VEGRITMTLKESELN 1199
[119][TOP]
>UniRef100_B6HJ96 Pc21g02010 protein n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255
RepID=B6HJ96_PENCW
Length = 1806
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/103 (27%), Positives = 58/103 (56%)
Frame = +3
Query: 15 SADVHSNEHASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQY 194
S VH E + ++++ P+ +++G+V+ VT G F+ +S I A + + +LSD Y
Sbjct: 1213 SLPVHDRE------ISSLKEVKPNDIIRGFVRRVTDSGLFVAISHDITAYVRVSDLSDSY 1266
Query: 195 IEDPEKEFPVGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSKS 323
+++ + F +LV G+V V+ +++++LK S + K+
Sbjct: 1267 LKEWKDSFQPDQLVKGKVTFVDAEQGKLQLSLKESVLDPNFKA 1309
[120][TOP]
>UniRef100_A3LTH8 Part of small ribosomal subunit (SSU) processosome (Contains U3
snoRNA) n=1 Tax=Pichia stipitis RepID=A3LTH8_PICST
Length = 1699
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/86 (36%), Positives = 52/86 (60%)
Frame = +3
Query: 51 KCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGK 230
K + I DL+ VVKG+VK+V G ++ L R + A + + +LSD Y++D +K F +
Sbjct: 1148 KVINSIADLNRGDVVKGFVKNVANNGVYVSLGRSVHALVRVADLSDAYLKDWKKYFKPHQ 1207
Query: 231 LVIGRVISVEPLSKRVEVTLKTSTVS 308
++G++ + + RV +TLK S VS
Sbjct: 1208 PILGKISACKE-EGRVLMTLKESEVS 1232
[121][TOP]
>UniRef100_B1KM41 RNA binding S1 domain protein n=1 Tax=Shewanella woodyi ATCC 51908
RepID=B1KM41_SHEWM
Length = 802
Score = 55.8 bits (133), Expect = 1e-06
Identities = 31/101 (30%), Positives = 57/101 (56%)
Frame = +3
Query: 42 ASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFP 221
A K+ VEK+ DL P+M+++G V +VT G F+ + D + I +L+D+++ DP
Sbjct: 661 AFKEGVEKVSDLKPEMILEGVVTNVTNFGAFVDVGVHQDGLVHISSLTDKFVSDPHTIVK 720
Query: 222 VGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSK 344
G +V +V+ V+ KR+ ++++ + KS + SK
Sbjct: 721 AGDVVKVKVMEVDAERKRIALSMRLDE-KPSEKSTNRTTSK 760
[122][TOP]
>UniRef100_C4DR25 Transcriptional accessory protein n=1 Tax=Stackebrandtia
nassauensis DSM 44728 RepID=C4DR25_9ACTO
Length = 783
Score = 55.8 bits (133), Expect = 1e-06
Identities = 31/101 (30%), Positives = 52/101 (51%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VEK+ DL P MV++G V +V G F+ + D + I +S+ Y+ DP G +V
Sbjct: 644 VEKLSDLAPGMVLEGTVTNVAAFGAFVDVGVHQDGLVHISAMSNDYVADPRDVAKPGDIV 703
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGD 359
RV+ V+ KR+ +T++ ++ + D +K GD
Sbjct: 704 KVRVLEVDEARKRISLTMRLQDKAEAKPPKQSDGNKRGKGD 744
[123][TOP]
>UniRef100_B6XH84 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens
DSM 30120 RepID=B6XH84_9ENTR
Length = 776
Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/79 (35%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS+ Y+EDP K G +V
Sbjct: 641 VETMTDLTPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNSYVEDPHKVVKTGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 701 KVKVLDVDIARKRIALTMR 719
[124][TOP]
>UniRef100_A0Y493 Conserved protein with nucleic acid-binding protein-like domain
(Transcriptional accessory protein) n=1
Tax=Alteromonadales bacterium TW-7 RepID=A0Y493_9GAMM
Length = 774
Score = 55.8 bits (133), Expect = 1e-06
Identities = 29/90 (32%), Positives = 50/90 (55%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K VEKI DL P M+++G V +V G F+ + D + I +++++I DP + G
Sbjct: 637 KAGVEKISDLKPGMILEGVVSNVANFGAFVDVGVHQDGLVHISAITNKFISDPREVVKAG 696
Query: 228 KLVIGRVISVEPLSKRVEVTLKTSTVSDTS 317
+V +V+ V+ KR+ T++ + DTS
Sbjct: 697 DIVKVKVVEVDASRKRISFTMRLNDEIDTS 726
[125][TOP]
>UniRef100_Q65QE6 Putative uncharacterized protein n=1 Tax=Mannheimia
succiniciproducens MBEL55E RepID=Q65QE6_MANSM
Length = 771
Score = 55.5 bits (132), Expect = 2e-06
Identities = 29/92 (31%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE+I DL M+++G + +VT G F+ + D + I +LSD+++EDP + G +V
Sbjct: 642 VEEITDLKAGMILEGTITNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGDVV 701
Query: 237 IGRVISVEPLSKRVEVTLK--TSTVSDTSKSE 326
+V+ V+ +R+ +T++ S V ++ KS+
Sbjct: 702 KVKVLEVDVARRRIALTMRLDESAVKNSEKSD 733
[126][TOP]
>UniRef100_A3CYV8 RNA binding S1 domain protein n=1 Tax=Shewanella baltica OS155
RepID=A3CYV8_SHEB5
Length = 787
Score = 55.5 bits (132), Expect = 2e-06
Identities = 29/93 (31%), Positives = 54/93 (58%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K VE+++ L P+MV++G V +VT G F+ + D + I +L+D++I DP G
Sbjct: 644 KDGVEELKHLKPEMVLEGVVTNVTNFGAFVDIGVHQDGLVHISSLTDKFISDPHTVVKAG 703
Query: 228 KLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSE 326
+V +V+ V+ +R+ ++++ D SKS+
Sbjct: 704 DVVKVKVMEVDVERRRIGLSMRLDEAIDQSKSQ 736
[127][TOP]
>UniRef100_Q6SGM3 S1 RNA binding domain protein n=1 Tax=uncultured marine bacterium
463 RepID=Q6SGM3_9BACT
Length = 772
Score = 55.5 bits (132), Expect = 2e-06
Identities = 29/81 (35%), Positives = 49/81 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VEKI DL PDMV++G V +VT G FI + D + I L++++++DP G +V
Sbjct: 642 VEKISDLRPDMVLEGTVTNVTNFGAFIDIGVHQDGLVHISALAEKFVKDPRDVVKAGDVV 701
Query: 237 IGRVISVEPLSKRVEVTLKTS 299
+V+ V+ KR+ ++++ S
Sbjct: 702 RVKVMEVDAPRKRIGLSMRLS 722
[128][TOP]
>UniRef100_C8QRV4 RNA binding S1 domain protein n=1 Tax=Dickeya dadantii Ech586
RepID=C8QRV4_DICDA
Length = 779
Score = 55.5 bits (132), Expect = 2e-06
Identities = 27/79 (34%), Positives = 48/79 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LSD+++EDP + G +V
Sbjct: 641 VETLNDLTPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSDRFVEDPHQVVKAGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 701 KVKVLEVDLQRKRIALTMR 719
[129][TOP]
>UniRef100_C5V4H3 RNA binding S1 domain protein n=1 Tax=Gallionella ferruginea ES-2
RepID=C5V4H3_9PROT
Length = 779
Score = 55.5 bits (132), Expect = 2e-06
Identities = 25/96 (26%), Positives = 54/96 (56%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+EKI DL PDM+++G V +V G F+ + D + I L++ +++DP G++V
Sbjct: 654 IEKISDLQPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALANSFVKDPHTVVKAGQIV 713
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSK 344
+V+ V+ KR+ +T++ + + + ++ + +
Sbjct: 714 KVKVLEVDEKRKRIALTMRLADAAPKADAKPRETKR 749
[130][TOP]
>UniRef100_B7RVW5 S1 RNA binding domain protein n=1 Tax=marine gamma proteobacterium
HTCC2148 RepID=B7RVW5_9GAMM
Length = 772
Score = 55.5 bits (132), Expect = 2e-06
Identities = 29/81 (35%), Positives = 49/81 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VEKI DL PDMV++G V +VT G FI + D + I L++++++DP G +V
Sbjct: 642 VEKISDLRPDMVLEGTVTNVTNFGAFIDIGVHQDGLVHISALAEKFVKDPRDVVKAGDVV 701
Query: 237 IGRVISVEPLSKRVEVTLKTS 299
+V+ V+ KR+ ++++ S
Sbjct: 702 RVKVMEVDAPRKRIGLSMRLS 722
[131][TOP]
>UniRef100_UPI00018441FD hypothetical protein PROVRUST_01390 n=1 Tax=Providencia rustigianii
DSM 4541 RepID=UPI00018441FD
Length = 776
Score = 55.1 bits (131), Expect = 2e-06
Identities = 28/79 (35%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS+ Y+EDP K G +V
Sbjct: 641 VETMNDLIPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNSYVEDPHKVVKAGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 701 KVKVLDVDIPRKRIALTMR 719
[132][TOP]
>UniRef100_Q0I5I4 Transcription accessory protein, RNA-binding protein containing S1
domain n=1 Tax=Haemophilus somnus 129PT
RepID=Q0I5I4_HAES1
Length = 767
Score = 55.1 bits (131), Expect = 2e-06
Identities = 29/102 (28%), Positives = 56/102 (54%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE+I DL M+++G V +VT G F+ + D + I +LSD+++E+P + G +V
Sbjct: 642 VEEITDLKAGMILEGSVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVENPHEVVKTGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGDL 362
+V+ V+ KR+ +T++ + S+ + HV ++
Sbjct: 702 KVKVLEVDVARKRIGLTMRLDENQPKTDRTSVKTTSVHVKEV 743
[133][TOP]
>UniRef100_C6CH20 RNA binding S1 domain protein n=1 Tax=Dickeya zeae Ech1591
RepID=C6CH20_DICZE
Length = 780
Score = 55.1 bits (131), Expect = 2e-06
Identities = 27/79 (34%), Positives = 48/79 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LSD+++EDP + G +V
Sbjct: 641 VETLNDLLPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSDRFVEDPHQVVKAGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 701 KVKVLEVDLQRKRIALTMR 719
[134][TOP]
>UniRef100_C6AQ16 Protein YhgF n=1 Tax=Aggregatibacter aphrophilus NJ8700
RepID=C6AQ16_AGGAN
Length = 771
Score = 55.1 bits (131), Expect = 2e-06
Identities = 30/92 (32%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE+I DL M+++G V +VT G F+ + D + I +LSD+++EDP + G +V
Sbjct: 642 VEEITDLKAGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGDVV 701
Query: 237 IGRVISVEPLSKRVEVTLK--TSTVSDTSKSE 326
+V+ V+ +R+ +T++ S V + KS+
Sbjct: 702 KVKVLEVDVARRRIALTMRLDESAVKNDGKSD 733
[135][TOP]
>UniRef100_C4LA14 RNA binding S1 domain protein n=1 Tax=Tolumonas auensis DSM 9187
RepID=C4LA14_TOLAT
Length = 767
Score = 55.1 bits (131), Expect = 2e-06
Identities = 27/88 (30%), Positives = 51/88 (57%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE+++DL PDM+++G V +VT G F+ + D + I ++++YI DP + G +V
Sbjct: 638 VEELKDLKPDMILEGVVTNVTNFGAFVDIGVHQDGLVHISAITNRYISDPREVVKAGDIV 697
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSK 320
+V+ V+ KR+ +T++ + K
Sbjct: 698 KVKVLEVDIPRKRIALTMRLDDEASRDK 725
[136][TOP]
>UniRef100_B8ECN9 RNA binding S1 domain protein n=1 Tax=Shewanella baltica OS223
RepID=B8ECN9_SHEB2
Length = 787
Score = 55.1 bits (131), Expect = 2e-06
Identities = 29/93 (31%), Positives = 54/93 (58%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K VE+++ L P+MV++G V +VT G F+ + D + I +L+D++I DP G
Sbjct: 644 KDGVEELKHLKPEMVLEGVVTNVTNFGAFVDIGVHQDGLVHISSLTDKFISDPHTIVKAG 703
Query: 228 KLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSE 326
+V +V+ V+ +R+ ++++ D SKS+
Sbjct: 704 DVVKVKVMEVDVERRRIGLSMRLDEAIDQSKSQ 736
[137][TOP]
>UniRef100_A9KUZ3 RNA binding S1 domain protein n=1 Tax=Shewanella baltica OS195
RepID=A9KUZ3_SHEB9
Length = 787
Score = 55.1 bits (131), Expect = 2e-06
Identities = 29/93 (31%), Positives = 54/93 (58%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K VE+++ L P+MV++G V +VT G F+ + D + I +L+D++I DP G
Sbjct: 644 KDGVEELKHLKPEMVLEGVVTNVTNFGAFVDIGVHQDGLVHISSLTDKFISDPHTIVKAG 703
Query: 228 KLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSE 326
+V +V+ V+ +R+ ++++ D SKS+
Sbjct: 704 DVVKVKVMEVDVERRRIGLSMRLDEAIDQSKSQ 736
[138][TOP]
>UniRef100_A7MGD7 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC
BAA-894 RepID=A7MGD7_ENTS8
Length = 775
Score = 55.1 bits (131), Expect = 2e-06
Identities = 28/79 (35%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P MV++G V +VT G F+ + D + I +LSD+++EDP G +V
Sbjct: 642 VETMNDLQPGMVLEGAVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVLEVDLPRKRIALTMR 720
[139][TOP]
>UniRef100_A6WU29 RNA binding S1 domain protein n=1 Tax=Shewanella baltica OS185
RepID=A6WU29_SHEB8
Length = 787
Score = 55.1 bits (131), Expect = 2e-06
Identities = 29/93 (31%), Positives = 54/93 (58%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K VE+++ L P+MV++G V +VT G F+ + D + I +L+D++I DP G
Sbjct: 644 KDGVEELKHLKPEMVLEGVVTNVTNFGAFVDIGVHQDGLVHISSLTDKFISDPHTIVKAG 703
Query: 228 KLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSE 326
+V +V+ V+ +R+ ++++ D SKS+
Sbjct: 704 DVVKVKVMEVDVERRRIGLSMRLDEAIDQSKSQ 736
[140][TOP]
>UniRef100_Q1MZ00 S1 RNA binding domain protein n=1 Tax=Bermanella marisrubri
RepID=Q1MZ00_9GAMM
Length = 776
Score = 55.1 bits (131), Expect = 2e-06
Identities = 28/84 (33%), Positives = 51/84 (60%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K+ VE+I+DL DM+++G V +V G F+ + D + I +SDQ+I+DP + G
Sbjct: 638 KEGVEEIKDLKDDMILEGVVSNVAAFGAFVDVGVHQDGLVHISMMSDQFIDDPRQVVKAG 697
Query: 228 KLVIGRVISVEPLSKRVEVTLKTS 299
+V +V+ V+ KR+ ++++ S
Sbjct: 698 DVVKVKVMEVDVPRKRIALSMRMS 721
[141][TOP]
>UniRef100_C9Y291 Protein yhgF n=1 Tax=Cronobacter turicensis RepID=C9Y291_9ENTR
Length = 787
Score = 55.1 bits (131), Expect = 2e-06
Identities = 28/79 (35%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P MV++G V +VT G F+ + D + I +LSD+++EDP G +V
Sbjct: 655 VETMNDLQPGMVLEGAVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHTVVKAGDIV 714
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 715 KVKVLEVDLPRKRIALTMR 733
[142][TOP]
>UniRef100_C6MGX2 RNA binding S1 domain protein n=1 Tax=Nitrosomonas sp. AL212
RepID=C6MGX2_9PROT
Length = 740
Score = 55.1 bits (131), Expect = 2e-06
Identities = 26/86 (30%), Positives = 52/86 (60%)
Frame = +3
Query: 42 ASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFP 221
A K+ +E I+DL DM+++G + +V G F+ + D + I LSD+++++P
Sbjct: 649 AFKEGIETIKDLRSDMILEGVITNVAAFGAFVDIGVHQDGLVHISALSDKFVKNPHAIVK 708
Query: 222 VGKLVIGRVISVEPLSKRVEVTLKTS 299
VG++V +V+ ++ KR+ +T++ S
Sbjct: 709 VGQVVTVKVLDIDEKRKRIALTMQLS 734
[143][TOP]
>UniRef100_C4DY27 Transcriptional accessory protein n=1 Tax=Streptobacillus
moniliformis DSM 12112 RepID=C4DY27_9FUSO
Length = 762
Score = 55.1 bits (131), Expect = 2e-06
Identities = 30/90 (33%), Positives = 51/90 (56%)
Frame = +3
Query: 66 IEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLVIGR 245
IEDL M ++G V++VT G F+ + K DA I I LS+ +I+DP K +G+++ R
Sbjct: 647 IEDLKVGMELEGTVRNVTKFGAFVDIGLKNDAMIHISELSNSFIDDPTKVLSIGQIIKVR 706
Query: 246 VISVEPLSKRVEVTLKTSTVSDTSKSESMD 335
V+ ++ RV +T K + +K + +
Sbjct: 707 VLDIDIQRGRVGLTRKDANYVKPNKKKKQN 736
[144][TOP]
>UniRef100_Q6CVZ2 KLLA0B08239p n=1 Tax=Kluyveromyces lactis RepID=Q6CVZ2_KLULA
Length = 1729
Score = 55.1 bits (131), Expect = 2e-06
Identities = 33/91 (36%), Positives = 56/91 (61%)
Frame = +3
Query: 90 VVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLVIGRVISVEPLS 269
+V+G+VKS+T KG FI LS + A + + L+D +I+D +K F G+ V+G+V++ +
Sbjct: 1162 IVRGFVKSITDKGVFISLSSVLQAFVPVSKLTDAFIKDWKKFFRRGQSVVGKVVNCDN-D 1220
Query: 270 KRVEVTLKTSTVSDTSKSESMDLSKFHVGDL 362
RV +TL+ S V+ + S +VGD+
Sbjct: 1221 DRVLLTLRESEVNG-QLNVLKSYSDINVGDI 1250
[145][TOP]
>UniRef100_Q2Y8N5 RNA binding S1 n=1 Tax=Nitrosospira multiformis ATCC 25196
RepID=Q2Y8N5_NITMU
Length = 790
Score = 54.7 bits (130), Expect = 3e-06
Identities = 29/101 (28%), Positives = 54/101 (53%)
Frame = +3
Query: 42 ASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFP 221
A K+ V +I DL P M+++G V +V G F+ + D + I L+D++++DP
Sbjct: 655 AFKEGVNEISDLQPGMLLEGVVTNVAAFGAFVDIGVHQDGLVHISALADKFVKDPHTVVK 714
Query: 222 VGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSK 344
VG++V +V+ V+ KR+ +T++ + E+ K
Sbjct: 715 VGQVVKVKVLEVDEKRKRIALTMRLADAPAPQTQEARGAGK 755
[146][TOP]
>UniRef100_Q2L128 Transcription accessory protein n=1 Tax=Bordetella avium 197N
RepID=Q2L128_BORA1
Length = 790
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/82 (32%), Positives = 50/82 (60%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K+ VE ++DLHP M+++G V +V G F+ + D + I L++++++DP VG
Sbjct: 658 KEGVETLKDLHPGMLLEGVVTNVANFGAFVDIGVHQDGLVHISALAEKFVKDPRDVVRVG 717
Query: 228 KLVIGRVISVEPLSKRVEVTLK 293
+ V +V+ V+ KRV +T++
Sbjct: 718 QTVTVKVLEVDVQRKRVALTMR 739
[147][TOP]
>UniRef100_B3E6B1 RNA binding S1 domain protein n=1 Tax=Geobacter lovleyi SZ
RepID=B3E6B1_GEOLS
Length = 762
Score = 54.7 bits (130), Expect = 3e-06
Identities = 25/81 (30%), Positives = 50/81 (61%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ +I DL M+++G V +VT G F+ + D + + +L++++I+DP VG++V
Sbjct: 640 IREISDLQEGMILQGVVTNVTAFGAFVDIGVHQDGLVHVSHLANRFIKDPNDAVQVGQVV 699
Query: 237 IGRVISVEPLSKRVEVTLKTS 299
+V+S +P KR+ +++K S
Sbjct: 700 KVKVLSADPQRKRIALSIKES 720
[148][TOP]
>UniRef100_A4SY73 RNA binding S1 domain protein n=1 Tax=Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SY73_POLSQ
Length = 784
Score = 54.7 bits (130), Expect = 3e-06
Identities = 28/84 (33%), Positives = 49/84 (58%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K+ VEKI DL DM+++G V +V G F+ + D + I LS+ +++DP G
Sbjct: 651 KEGVEKISDLKADMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTFVKDPHTVVKAG 710
Query: 228 KLVIGRVISVEPLSKRVEVTLKTS 299
++V +V+ V+ KR+ +T++ S
Sbjct: 711 QVVKVKVLEVDEKRKRIALTMRLS 734
[149][TOP]
>UniRef100_C8QE48 RNA binding S1 domain protein n=1 Tax=Pantoea sp. At-9b
RepID=C8QE48_9ENTR
Length = 777
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/79 (34%), Positives = 48/79 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LSD+++EDP + G +V
Sbjct: 642 VETLNDLLPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVMEVDLQRKRIALTMR 720
[150][TOP]
>UniRef100_C5EVV4 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium
1_7_47FAA RepID=C5EVV4_9FIRM
Length = 714
Score = 54.7 bits (130), Expect = 3e-06
Identities = 28/77 (36%), Positives = 48/77 (62%)
Frame = +3
Query: 63 KIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLVIG 242
+++DL P MV+KG V++V G F+ + D + I L+D+YI+ P + VG +V
Sbjct: 636 EMKDLKPGMVLKGTVRNVIDFGAFVDIGVHQDGLVHISQLTDRYIKHPLEAVSVGDVVDV 695
Query: 243 RVISVEPLSKRVEVTLK 293
++ISV+ KR+ +T+K
Sbjct: 696 KIISVDLAKKRIALTMK 712
[151][TOP]
>UniRef100_A4CEU5 Conserved protein with nucleic acid-binding protein-like domain
(Transcriptional accessory protein) n=1
Tax=Pseudoalteromonas tunicata D2 RepID=A4CEU5_9GAMM
Length = 772
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/101 (26%), Positives = 55/101 (54%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K+ VEK+ DL P M+++G V +V G F+ + D + I +++++I DP + G
Sbjct: 637 KEGVEKVSDLKPGMILEGVVSNVANFGAFVDVGVHQDGLVHISAITNKFISDPREVVKAG 696
Query: 228 KLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFH 350
+V +V+ V+ R+ T++ + + ++S + +K H
Sbjct: 697 DIVKVKVVEVDAARNRISFTMRLNDEIQHTTADSSNTTKRH 737
[152][TOP]
>UniRef100_Q0CVE4 Putative uncharacterized protein n=1 Tax=Aspergillus terreus NIH2624
RepID=Q0CVE4_ASPTN
Length = 1798
Score = 54.7 bits (130), Expect = 3e-06
Identities = 28/103 (27%), Positives = 56/103 (54%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ ++DL + VV+G+V+ V G F+ + + + + +LSD Y+++ + F +LV
Sbjct: 1205 ITSMKDLKVNDVVRGFVRRVADSGLFVTVGHGVTVYVRVSDLSDSYLKEWKDSFQADQLV 1264
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHVGDLI 365
GR+ V+P +++++LK S V D + LS G ++
Sbjct: 1265 KGRITVVDPEHNKLQMSLKDS-VLDPDYKAPLTLSDLKPGQIV 1306
[153][TOP]
>UniRef100_UPI000197CAED hypothetical protein PROVRETT_01471 n=1 Tax=Providencia rettgeri
DSM 1131 RepID=UPI000197CAED
Length = 776
Score = 54.3 bits (129), Expect = 4e-06
Identities = 29/89 (32%), Positives = 49/89 (55%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL M+++G V +VT G F+ + D + I +LS+ Y+EDP K G +V
Sbjct: 641 VETMNDLTSGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNSYVEDPHKVVKAGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKS 323
+V+ V+ KR+ +T++ + S S
Sbjct: 701 KVKVLDVDIARKRIALTMRLDEQAGDSNS 729
[154][TOP]
>UniRef100_Q82SV2 S1 RNA binding domain n=1 Tax=Nitrosomonas europaea
RepID=Q82SV2_NITEU
Length = 801
Score = 54.3 bits (129), Expect = 4e-06
Identities = 25/86 (29%), Positives = 52/86 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+E I DL P M+++G V +V G FI + D + + L++++I+DP + G++V
Sbjct: 667 IESITDLQPGMILEGVVTNVAAFGAFIDIGVHQDGLVHVSALANKFIKDPHQIVKPGQVV 726
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDT 314
RV++V+ + +R+ +T++ + +T
Sbjct: 727 KVRVLTVDAVRQRISLTMRIDDIPET 752
[155][TOP]
>UniRef100_Q6CZM9 Putative RNA binding protein n=1 Tax=Pectobacterium atrosepticum
RepID=Q6CZM9_ERWCT
Length = 777
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/79 (34%), Positives = 48/79 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE ++DL P MV++G V +VT G F+ + D + I +L+D +++DP K G +V
Sbjct: 641 VETLKDLLPGMVLEGAVTNVTNFGAFVDIGVHQDGLVHISSLADHFVDDPHKVVKAGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 701 KVKVMEVDLQRKRIALTMR 719
[156][TOP]
>UniRef100_Q12SN7 RNA binding S1 n=1 Tax=Shewanella denitrificans OS217
RepID=Q12SN7_SHEDO
Length = 799
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/92 (29%), Positives = 55/92 (59%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K+ VE+++DL P+M+++G V +VT G F+ + D + I +L+D+++ DP G
Sbjct: 644 KEGVEELKDLKPEMILEGVVTNVTNFGAFVDVGVHQDGLVHISSLTDKFVSDPHTIVKAG 703
Query: 228 KLVIGRVISVEPLSKRVEVTLKTSTVSDTSKS 323
+V +V+ V+ +R+ ++++ +TS S
Sbjct: 704 DVVKVKVMEVDIERRRIGLSMRLDEAINTSAS 735
[157][TOP]
>UniRef100_C6C7Z0 RNA binding S1 domain protein n=1 Tax=Dickeya dadantii Ech703
RepID=C6C7Z0_DICDC
Length = 775
Score = 54.3 bits (129), Expect = 4e-06
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +L+D++++DP K G +V
Sbjct: 641 VETLNDLTPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLADRFVDDPHKVVKAGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 701 KVKVLEVDLPRKRIALTMR 719
[158][TOP]
>UniRef100_B2K5V2 RNA binding S1 domain protein n=2 Tax=Yersinia pseudotuberculosis
RepID=B2K5V2_YERPB
Length = 791
Score = 54.3 bits (129), Expect = 4e-06
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +L+D++++DP K G +V
Sbjct: 641 VETLNDLTPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLADKFVDDPHKVVKAGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 701 KVKVMEVDLQRKRIALTMR 719
[159][TOP]
>UniRef100_B1JI00 RNA binding S1 domain protein n=1 Tax=Yersinia pseudotuberculosis
YPIII RepID=B1JI00_YERPY
Length = 791
Score = 54.3 bits (129), Expect = 4e-06
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +L+D++++DP K G +V
Sbjct: 641 VETLNDLTPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLADKFVDDPHKVVKAGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 701 KVKVMEVDLQRKRIALTMR 719
[160][TOP]
>UniRef100_B0TNR5 RNA binding S1 domain protein n=1 Tax=Shewanella halifaxensis
HAW-EB4 RepID=B0TNR5_SHEHH
Length = 785
Score = 54.3 bits (129), Expect = 4e-06
Identities = 26/82 (31%), Positives = 52/82 (63%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K+ VE+I+DL DM+++G V +VT G F+ + D + I +++D++I+DP K G
Sbjct: 640 KEGVEEIKDLQLDMILEGVVTNVTNFGAFVDVGVHQDGLVHISSMTDKFIDDPHKVVKAG 699
Query: 228 KLVIGRVISVEPLSKRVEVTLK 293
+V +V+ V+ +R+ ++++
Sbjct: 700 DIVKVKVMEVDAERRRIALSMR 721
[161][TOP]
>UniRef100_A7FNV2 Putative uncharacterized protein n=1 Tax=Yersinia
pseudotuberculosis IP 31758 RepID=A7FNV2_YERP3
Length = 791
Score = 54.3 bits (129), Expect = 4e-06
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +L+D++++DP K G +V
Sbjct: 641 VETLNDLTPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLADKFVDDPHKVVKAGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 701 KVKVMEVDLQRKRIALTMR 719
[162][TOP]
>UniRef100_C4UUN1 Putative uncharacterized protein n=1 Tax=Yersinia rohdei ATCC 43380
RepID=C4UUN1_YERRO
Length = 793
Score = 54.3 bits (129), Expect = 4e-06
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +L+D++++DP K G +V
Sbjct: 641 VETLNDLTPGMILEGSVTNVTNFGAFVDIGVHQDGLVHISSLADKFVDDPHKVVKAGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 701 KVKVMEVDLQRKRIALTMR 719
[163][TOP]
>UniRef100_C4U8Q4 Putative uncharacterized protein n=1 Tax=Yersinia aldovae ATCC
35236 RepID=C4U8Q4_YERAL
Length = 788
Score = 54.3 bits (129), Expect = 4e-06
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +L+D++++DP K G +V
Sbjct: 641 VETLNDLTPGMILEGSVTNVTNFGAFVDIGVHQDGLVHISSLADKFVDDPHKVVKAGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 701 KVKVMEVDLQRKRIALTMR 719
[164][TOP]
>UniRef100_C4U2B0 Putative uncharacterized protein n=1 Tax=Yersinia kristensenii ATCC
33638 RepID=C4U2B0_YERKR
Length = 792
Score = 54.3 bits (129), Expect = 4e-06
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +L+D++++DP K G +V
Sbjct: 641 VETLNDLTPGMILEGSVTNVTNFGAFVDIGVHQDGLVHISSLADKFVDDPHKVVKAGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 701 KVKVMEVDLQRKRIALTMR 719
[165][TOP]
>UniRef100_C4T140 Putative uncharacterized protein n=1 Tax=Yersinia intermedia ATCC
29909 RepID=C4T140_YERIN
Length = 792
Score = 54.3 bits (129), Expect = 4e-06
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +L+D++++DP K G +V
Sbjct: 641 VETLNDLTPGMILEGSVTNVTNFGAFVDIGVHQDGLVHISSLADKFVDDPHKVVKAGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 701 KVKVMEVDLQRKRIALTMR 719
[166][TOP]
>UniRef100_Q3JBJ4 RNA binding S1 n=2 Tax=Nitrosococcus oceani RepID=Q3JBJ4_NITOC
Length = 765
Score = 54.3 bits (129), Expect = 4e-06
Identities = 25/95 (26%), Positives = 55/95 (57%)
Frame = +3
Query: 42 ASKKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFP 221
A K+ ++ +EDL P M+++G +VT G F+ + D + I L+D++++DP +
Sbjct: 634 AFKEEIQTLEDLKPGMILEGVATNVTAFGAFVDVGVHQDGLVHISALADRFVKDPHEIVS 693
Query: 222 VGKLVIGRVISVEPLSKRVEVTLKTSTVSDTSKSE 326
G +V +V+ V+ + +R+ +T++ + + S+
Sbjct: 694 AGDIVKVKVLEVDNVRQRIGLTMRLGEMEEKQSSQ 728
[167][TOP]
>UniRef100_A8S358 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC
BAA-613 RepID=A8S358_9CLOT
Length = 715
Score = 54.3 bits (129), Expect = 4e-06
Identities = 26/77 (33%), Positives = 48/77 (62%)
Frame = +3
Query: 63 KIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLVIG 242
+++DL P MV+KG V++V G F+ + D + I ++D+YI+ P + VG +V
Sbjct: 636 EMKDLEPGMVLKGTVRNVIDFGAFVDIGVHQDGLVHISQMTDKYIKHPLEAVSVGDIVDV 695
Query: 243 RVISVEPLSKRVEVTLK 293
+++SV+ KR+ +T+K
Sbjct: 696 KILSVDLAKKRISLTMK 712
[168][TOP]
>UniRef100_A6BW08 Predicted transcriptional accessory protein n=15 Tax=Yersinia
pestis RepID=A6BW08_YERPE
Length = 791
Score = 54.3 bits (129), Expect = 4e-06
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +L+D++++DP K G +V
Sbjct: 641 VETLNDLTPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLADKFVDDPHKVVKAGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 701 KVKVMEVDLQRKRIALTMR 719
[169][TOP]
>UniRef100_Q7WGI8 Transcription accessory protein n=1 Tax=Bordetella bronchiseptica
RepID=Q7WGI8_BORBR
Length = 791
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/91 (29%), Positives = 53/91 (58%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K+ VE + DL P MV++G V +V G F+ + D + I L++++++DP VG
Sbjct: 658 KEGVETLNDLFPGMVLEGVVTNVANFGAFVDIGVHQDGLVHISALAEKFVKDPRDVVRVG 717
Query: 228 KLVIGRVISVEPLSKRVEVTLKTSTVSDTSK 320
+ V +V+ V+ KRV +T++ + ++ ++
Sbjct: 718 QTVTVKVLEVDVARKRVALTMRLNDAAEPAR 748
[170][TOP]
>UniRef100_Q7W5T7 Transcription accessory protein n=1 Tax=Bordetella parapertussis
RepID=Q7W5T7_BORPA
Length = 791
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/91 (29%), Positives = 53/91 (58%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K+ VE + DL P MV++G V +V G F+ + D + I L++++++DP VG
Sbjct: 658 KEGVETLNDLFPGMVLEGVVTNVANFGAFVDIGVHQDGLVHISALAEKFVKDPRDVVRVG 717
Query: 228 KLVIGRVISVEPLSKRVEVTLKTSTVSDTSK 320
+ V +V+ V+ KRV +T++ + ++ ++
Sbjct: 718 QTVTVKVLEVDVARKRVALTMRLNDTAEPAR 748
[171][TOP]
>UniRef100_Q2S8F6 Transcriptional accessory protein n=1 Tax=Hahella chejuensis KCTC
2396 RepID=Q2S8F6_HAHCH
Length = 775
Score = 53.9 bits (128), Expect = 5e-06
Identities = 28/79 (35%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE I+DL P MV++G V +VT G F+ + D + I LS ++++DP + G +V
Sbjct: 642 VEDIKDLKPGMVLEGAVTNVTNFGAFVDIGVHQDGLVHISALSHKFVKDPREVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+VI V+ KR+ +T++
Sbjct: 702 KVKVIEVDAARKRIALTMR 720
[172][TOP]
>UniRef100_B4EZJ1 Putative transcription accessory protein n=1 Tax=Proteus mirabilis
HI4320 RepID=B4EZJ1_PROMH
Length = 777
Score = 53.9 bits (128), Expect = 5e-06
Identities = 29/96 (30%), Positives = 53/96 (55%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL M+++G V +VT G F+ + D + I +LSD+++EDP G +V
Sbjct: 641 VETMNDLVSGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDRFVEDPHTVVKTGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSK 344
+V+ V+ KR+ +T++ V+ S + ++K
Sbjct: 701 KVKVLEVDLPRKRIALTMRLDEVAADSDHKRQSVTK 736
[173][TOP]
>UniRef100_A1APM8 RNA binding S1 domain protein n=1 Tax=Pelobacter propionicus DSM
2379 RepID=A1APM8_PELPD
Length = 723
Score = 53.9 bits (128), Expect = 5e-06
Identities = 25/79 (31%), Positives = 48/79 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ KIEDL MV++G V +VT G F+ + D + I +L++++++ P G+LV
Sbjct: 640 IRKIEDLREGMVLQGVVTNVTAFGAFVDIGVHQDGLVHISHLANRFVKSPHDAVQAGQLV 699
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+S +P KR+ ++++
Sbjct: 700 RVKVLSADPKRKRISLSIR 718
[174][TOP]
>UniRef100_C9R2S6 Protein YhgF n=1 Tax=Aggregatibacter actinomycetemcomitans D11S-1
RepID=C9R2S6_ACTAC
Length = 771
Score = 53.9 bits (128), Expect = 5e-06
Identities = 29/92 (31%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE+I DL M+++G V +VT G F+ + D + I +LSD+++E+P + G +V
Sbjct: 642 VEEITDLKAGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEEPHQVVKTGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK--TSTVSDTSKSE 326
+V+ V+ +R+ +T++ S V + KS+
Sbjct: 702 KVKVLEVDVARRRIALTMRLDESAVKNDGKSD 733
[175][TOP]
>UniRef100_C6NZN2 RNA binding S1 domain protein n=1 Tax=Sideroxydans lithotrophicus
ES-1 RepID=C6NZN2_9GAMM
Length = 801
Score = 53.9 bits (128), Expect = 5e-06
Identities = 25/79 (31%), Positives = 48/79 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE+++DL P M+++G V +V G F+ + D + I L+D++++DP G++V
Sbjct: 670 VEELKDLEPGMILEGVVTNVAAFGAFVDIGVHQDGLVHISALADKFVKDPHSVVKAGQIV 729
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KRV +T++
Sbjct: 730 KVKVLEVDVKRKRVSLTMR 748
[176][TOP]
>UniRef100_C6NCD2 RNA binding S1 domain protein n=1 Tax=Pectobacterium wasabiae
WPP163 RepID=C6NCD2_9ENTR
Length = 777
Score = 53.9 bits (128), Expect = 5e-06
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +L+D++++DP K G +V
Sbjct: 641 VETLNDLLPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLADRFVDDPHKVVKAGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 701 KVKVMEVDLQRKRIALTMR 719
[177][TOP]
>UniRef100_C4UH17 Putative uncharacterized protein n=1 Tax=Yersinia ruckeri ATCC
29473 RepID=C4UH17_YERRU
Length = 782
Score = 53.9 bits (128), Expect = 5e-06
Identities = 30/99 (30%), Positives = 52/99 (52%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL M+++G V +VT G F+ + D + I +L+D++++DP K G +V
Sbjct: 641 VETMNDLTVGMILEGSVTNVTNFGAFVDIGVHQDGLVHISSLADKFVDDPHKVVKAGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSKFHV 353
+V+ V+ KR+ +T++ S S K HV
Sbjct: 701 KVKVMEVDLQRKRIALTMRLDEQPGESHSRRGSSEKSHV 739
[178][TOP]
>UniRef100_C4SQF2 Putative uncharacterized protein n=1 Tax=Yersinia frederiksenii
ATCC 33641 RepID=C4SQF2_YERFR
Length = 790
Score = 53.9 bits (128), Expect = 5e-06
Identities = 25/79 (31%), Positives = 48/79 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +L+D++++DP K G +V
Sbjct: 641 VETLNDLTPGMILEGSVTNVTNFGAFVDIGVHQDGLVHISSLADKFVDDPHKVVKAGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ ++ KR+ +T++
Sbjct: 701 KVKVMEIDLQRKRIALTMR 719
[179][TOP]
>UniRef100_C4SCQ9 Putative uncharacterized protein n=1 Tax=Yersinia mollaretii ATCC
43969 RepID=C4SCQ9_YERMO
Length = 788
Score = 53.9 bits (128), Expect = 5e-06
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +L+D++++DP K G +V
Sbjct: 641 VETMNDLTPGMILEGSVTNVTNFGAFVDIGVHQDGLVHISSLADKFVDDPHKVVKAGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 701 KVKVMEVDLQRKRIALTMR 719
[180][TOP]
>UniRef100_C4RXM9 Putative uncharacterized protein n=1 Tax=Yersinia bercovieri ATCC
43970 RepID=C4RXM9_YERBE
Length = 788
Score = 53.9 bits (128), Expect = 5e-06
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +L+D++++DP K G +V
Sbjct: 641 VETMNDLTPGMILEGSVTNVTNFGAFVDIGVHQDGLVHISSLADKFVDDPHKVVKAGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 701 KVKVMEVDLQRKRIALTMR 719
[181][TOP]
>UniRef100_C2LEV4 Transcription accessory protein n=1 Tax=Proteus mirabilis ATCC
29906 RepID=C2LEV4_PROMI
Length = 777
Score = 53.9 bits (128), Expect = 5e-06
Identities = 29/96 (30%), Positives = 53/96 (55%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL M+++G V +VT G F+ + D + I +LSD+++EDP G +V
Sbjct: 641 VETMNDLVSGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHTVVKTGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLKTSTVSDTSKSESMDLSK 344
+V+ V+ KR+ +T++ V+ S + ++K
Sbjct: 701 KVKVLEVDLPRKRIALTMRLDEVAADSDHKRQSVTK 736
[182][TOP]
>UniRef100_C0AUF7 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198
RepID=C0AUF7_9ENTR
Length = 779
Score = 53.9 bits (128), Expect = 5e-06
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL M+++G V +VT G F+ + D + I +L+D++IEDP G +V
Sbjct: 641 VETMNDLVSGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLADRFIEDPHTVVKTGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLKTSTVS-DTSKSES 329
+V+ V+ KR+ +T++ V+ D+ K +S
Sbjct: 701 KVKVLEVDLARKRIALTMRLDEVAGDSDKKQS 732
[183][TOP]
>UniRef100_A0NN81 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM
12614 RepID=A0NN81_9RHOB
Length = 846
Score = 53.9 bits (128), Expect = 5e-06
Identities = 26/80 (32%), Positives = 47/80 (58%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE+I DL P M ++G V +VT G F+ + D + + L+D++++DP K G +V
Sbjct: 688 VEEISDLKPGMKLEGTVTNVTNFGAFVDVGVHQDGLVHVSQLADRFVDDPHKVVKAGDIV 747
Query: 237 IGRVISVEPLSKRVEVTLKT 296
++ V+ KR+ +T+K+
Sbjct: 748 KVTILEVDVPRKRISMTMKS 767
[184][TOP]
>UniRef100_Q45388 Protein tex n=1 Tax=Bordetella pertussis RepID=TEX_BORPE
Length = 791
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/91 (29%), Positives = 53/91 (58%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K+ VE + DL P MV++G V +V G F+ + D + I L++++++DP VG
Sbjct: 658 KEGVETLNDLFPGMVLEGVVTNVANFGAFVDIGVHQDGLVHISALAEKFVKDPRDVVRVG 717
Query: 228 KLVIGRVISVEPLSKRVEVTLKTSTVSDTSK 320
+ V +V+ V+ KRV +T++ + ++ ++
Sbjct: 718 QTVTVKVLEVDVARKRVALTMRLNDAAEPAR 748
[185][TOP]
>UniRef100_UPI0001A43725 putative RNA binding protein n=1 Tax=Pectobacterium carotovorum
subsp. carotovorum WPP14 RepID=UPI0001A43725
Length = 777
Score = 53.5 bits (127), Expect = 7e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +L+D +++DP K G +V
Sbjct: 641 VETLNDLLPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLADHFVDDPHKVVKAGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 701 KVKVMEVDLQRKRIALTMR 719
[186][TOP]
>UniRef100_UPI0001A42B44 putative RNA binding protein n=1 Tax=Pectobacterium carotovorum
subsp. brasiliensis PBR1692 RepID=UPI0001A42B44
Length = 777
Score = 53.5 bits (127), Expect = 7e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +L+D +++DP K G +V
Sbjct: 641 VETLNDLLPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLADHFVDDPHKVVKAGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 701 KVKVMEVDLQRKRIALTMR 719
[187][TOP]
>UniRef100_Q5QUM6 Transcriptional accessory protein n=1 Tax=Idiomarina loihiensis
RepID=Q5QUM6_IDILO
Length = 776
Score = 53.5 bits (127), Expect = 7e-06
Identities = 28/84 (33%), Positives = 49/84 (58%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K+ VEK+ DL P M+++G V +V G FI + D + I L+D+++ DP + G
Sbjct: 639 KEGVEKVSDLKPGMLLEGVVTNVANFGAFIDVGVHQDGLVHISALADKFVSDPREVVKAG 698
Query: 228 KLVIGRVISVEPLSKRVEVTLKTS 299
+V +V+ V+ KR+ +T++ S
Sbjct: 699 DIVKVKVLEVDIERKRIGLTMRLS 722
[188][TOP]
>UniRef100_C6DGG4 RNA binding S1 domain protein n=1 Tax=Pectobacterium carotovorum
subsp. carotovorum PC1 RepID=C6DGG4_PECCP
Length = 777
Score = 53.5 bits (127), Expect = 7e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +L+D +++DP K G +V
Sbjct: 641 VETLNDLLPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLADHFVDDPHKVVKAGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 701 KVKVMEVDLQRKRIALTMR 719
[189][TOP]
>UniRef100_B0CAN6 S1 RNA binding domain protein n=1 Tax=Acaryochloris marina
MBIC11017 RepID=B0CAN6_ACAM1
Length = 720
Score = 53.5 bits (127), Expect = 7e-06
Identities = 25/85 (29%), Positives = 54/85 (63%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K+ + ++ DL P+M ++G V +VT G F+ + D + I ++DQ+++DP++ VG
Sbjct: 633 KEGITELTDLKPEMELEGIVTNVTNFGAFVDVGVHQDGLVHISQMADQFVKDPKQIVKVG 692
Query: 228 KLVIGRVISVEPLSKRVEVTLKTST 302
++V RV+ V KR+ +++++++
Sbjct: 693 QVVKVRVLEVNQKLKRIGLSMRSTS 717
[190][TOP]
>UniRef100_A9IIW4 Transcription accessory protein n=1 Tax=Bordetella petrii DSM 12804
RepID=A9IIW4_BORPD
Length = 791
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/91 (29%), Positives = 52/91 (57%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K VE + DL+P MV++G V +V G F+ + D + I L++++++DP VG
Sbjct: 658 KDGVETLNDLYPGMVLEGVVTNVANFGAFVDIGVHQDGLVHISALAEKFVKDPRDVVRVG 717
Query: 228 KLVIGRVISVEPLSKRVEVTLKTSTVSDTSK 320
+ V +V+ V+ KRV +T++ + + ++
Sbjct: 718 QTVTVKVLEVDVARKRVALTMRLNDTAQPAR 748
[191][TOP]
>UniRef100_A8H9T8 RNA binding S1 domain protein n=1 Tax=Shewanella pealeana ATCC
700345 RepID=A8H9T8_SHEPA
Length = 803
Score = 53.5 bits (127), Expect = 7e-06
Identities = 26/82 (31%), Positives = 52/82 (63%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K+ VE+I+DL DM+++G V +VT G F+ + D + I +++D++I+DP K G
Sbjct: 661 KEGVEEIKDLKLDMILEGVVTNVTNFGAFVDVGVHQDGLVHISSMTDKFIDDPHKVVKAG 720
Query: 228 KLVIGRVISVEPLSKRVEVTLK 293
+V +V+ V+ +R+ ++++
Sbjct: 721 DIVKVKVMEVDAERRRIGLSMR 742
[192][TOP]
>UniRef100_A1R3T9 Putative transcriptional accessory protein n=1 Tax=Arthrobacter
aurescens TC1 RepID=A1R3T9_ARTAT
Length = 818
Score = 53.5 bits (127), Expect = 7e-06
Identities = 25/79 (31%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+EKI DL P M+++G V +V G F+ + D + + LS++++ DP + G++V
Sbjct: 650 IEKISDLKPGMILEGTVTNVAAFGAFVDVGVHQDGLVHVSALSNKFVSDPREIVKSGQVV 709
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ +P KR+ +TL+
Sbjct: 710 RVKVLEADPERKRISLTLR 728
[193][TOP]
>UniRef100_Q1ZC98 Putative uncharacterized protein n=1 Tax=Psychromonas sp. CNPT3
RepID=Q1ZC98_9GAMM
Length = 723
Score = 53.5 bits (127), Expect = 7e-06
Identities = 25/79 (31%), Positives = 49/79 (62%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ KI DL+ DM ++G + +VT G F+ + D I + L++++++DP + G++V
Sbjct: 639 INKISDLYTDMEIQGVITNVTSFGAFVDIGVHQDGLIHLSQLANKFVKDPFEVVKTGQIV 698
Query: 237 IGRVISVEPLSKRVEVTLK 293
RV+SV+ KR+ ++L+
Sbjct: 699 QVRVLSVDSERKRISLSLR 717
[194][TOP]
>UniRef100_D0CP90 Protein YhgF n=1 Tax=Silicibacter lacuscaerulensis ITI-1157
RepID=D0CP90_9RHOB
Length = 810
Score = 53.5 bits (127), Expect = 7e-06
Identities = 26/82 (31%), Positives = 50/82 (60%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K+ VE+I DL P MV++G V +V G F+ + D + + L+D++++DP + G
Sbjct: 676 KEGVEEITDLKPGMVLEGTVTNVAAFGAFVDIGVHQDGLVHVSELADRFVKDPHEVVKAG 735
Query: 228 KLVIGRVISVEPLSKRVEVTLK 293
++V RV+ V+ KR+ ++++
Sbjct: 736 QVVRVRVVEVDVPRKRIGLSMR 757
[195][TOP]
>UniRef100_C8PAP7 30S ribosomal protein S1 n=1 Tax=Lactobacillus iners DSM 13335
RepID=C8PAP7_9LACO
Length = 395
Score = 53.5 bits (127), Expect = 7e-06
Identities = 29/90 (32%), Positives = 50/90 (55%)
Frame = +3
Query: 60 EKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLVI 239
E +LH V+ G VKS+T G FI ++ I + + +S++ +E P VG+ V
Sbjct: 275 EATSELHEGDVIDGEVKSLTSFGAFIEVASGIQGLVHVSEISNKRVEKPSDFLKVGQTVK 334
Query: 240 GRVISVEPLSKRVEVTLKTSTVSDTSKSES 329
+V+ ++P KR+ +++K T SD +ES
Sbjct: 335 VKVLGIDPSDKRISLSIK-QTESDNKSNES 363
[196][TOP]
>UniRef100_C6WCU3 RNA binding S1 domain protein n=1 Tax=Actinosynnema mirum DSM 43827
RepID=C6WCU3_ACTMD
Length = 785
Score = 53.5 bits (127), Expect = 7e-06
Identities = 30/79 (37%), Positives = 45/79 (56%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VEKI DL P MV++G V +V G F+ + D + I LSD Y++DP G +V
Sbjct: 637 VEKIADLKPGMVLEGVVTNVAAFGAFVDVGVHQDGLVHISALSDTYVKDPRDVVKSGDVV 696
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +TL+
Sbjct: 697 RVKVLEVDIPRKRIGLTLR 715
[197][TOP]
>UniRef100_C5DF89 KLTH0D13156p n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5DF89_LACTC
Length = 1731
Score = 53.5 bits (127), Expect = 7e-06
Identities = 31/80 (38%), Positives = 47/80 (58%)
Frame = +3
Query: 69 EDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLVIGRV 248
EDL VV+G VK +T KG FI LS + A + + L+D +I+D K F + V+G+V
Sbjct: 1173 EDLKRGDVVRGLVKKITEKGIFIYLSSTLQAFVPVSKLTDSFIKDWRKFFKPMQSVVGKV 1232
Query: 249 ISVEPLSKRVEVTLKTSTVS 308
++ + + VTLK S V+
Sbjct: 1233 VNCDD-DSHILVTLKESEVN 1251
[198][TOP]
>UniRef100_UPI0001B53EE5 transcription accessory protein n=1 Tax=Streptomyces sp. SPB78
RepID=UPI0001B53EE5
Length = 1218
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/82 (32%), Positives = 48/82 (58%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K+ VEK+ DL P MV++G V +V G F+ + D + + LS ++++DP + G
Sbjct: 621 KEGVEKLSDLEPGMVLEGVVTNVAAFGAFVDIGVHQDGLVHVSALSREFVKDPREVVKPG 680
Query: 228 KLVIGRVISVEPLSKRVEVTLK 293
+V +V+ V+ KR+ +TL+
Sbjct: 681 DIVKVKVLDVDLPRKRISLTLR 702
[199][TOP]
>UniRef100_UPI00018268DE hypothetical protein ENTCAN_00116 n=1 Tax=Enterobacter cancerogenus
ATCC 35316 RepID=UPI00018268DE
Length = 776
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/79 (34%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P MV++G V +VT G F+ + D + I +L+D+++EDP G +V
Sbjct: 642 VETMNDLLPGMVLEGAVTNVTNFGAFVDIGVHQDGLVHISSLADKFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVLEVDLQRKRIALTMR 720
[200][TOP]
>UniRef100_UPI00017F321B hypothetical protein EscherichcoliO157_32501 n=1 Tax=Escherichia
coli O157:H7 str. EC4024 RepID=UPI00017F321B
Length = 199
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/79 (34%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P MV++G V +VT G F+ + D + I +L+D+++EDP G +V
Sbjct: 65 VETMNDLLPGMVLEGAVTNVTNFGAFVDIGVHQDGLVHISSLADKFVEDPHTVVKAGDIV 124
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 125 KVKVLEVDLQRKRIALTMR 143
[201][TOP]
>UniRef100_Q9CL01 Putative uncharacterized protein n=1 Tax=Pasteurella multocida
RepID=Q9CL01_PASMU
Length = 791
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/79 (34%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE I DL M+++G V +VT G F+ + D + I +LSD+++EDP + G +V
Sbjct: 661 VEDINDLKVGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGDIV 720
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 721 KVKVLEVDVPRKRIALTMR 739
[202][TOP]
>UniRef100_Q83PW5 Putative uncharacterized protein yhgF n=1 Tax=Shigella flexneri
RepID=Q83PW5_SHIFL
Length = 740
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 609 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 668
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 669 KVKVLEVDLQRKRIALTMR 687
[203][TOP]
>UniRef100_Q3YWL8 Putative uncharacterized protein yhgF n=1 Tax=Shigella sonnei Ss046
RepID=Q3YWL8_SHISS
Length = 740
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 609 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 668
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 669 KVKVLEVDLQRKRIALTMR 687
[204][TOP]
>UniRef100_Q32AM1 Putative uncharacterized protein yhgF n=1 Tax=Shigella dysenteriae
Sd197 RepID=Q32AM1_SHIDS
Length = 740
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 609 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 668
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 669 KVKVLEVDLQRKRIALTMR 687
[205][TOP]
>UniRef100_Q31VM7 Putative uncharacterized protein yhgF n=1 Tax=Shigella boydii Sb227
RepID=Q31VM7_SHIBS
Length = 740
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 609 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 668
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 669 KVKVLEVDLQRKRIALTMR 687
[206][TOP]
>UniRef100_Q0SZR1 Putative uncharacterized protein yhgF n=1 Tax=Shigella flexneri 5
str. 8401 RepID=Q0SZR1_SHIF8
Length = 773
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVLEVDLQRKRIALTMR 720
[207][TOP]
>UniRef100_B8HDI0 RNA binding S1 domain protein n=1 Tax=Arthrobacter chlorophenolicus
A6 RepID=B8HDI0_ARTCA
Length = 830
Score = 53.1 bits (126), Expect = 9e-06
Identities = 25/79 (31%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+EKI DL P MV++G V +V G F+ + D + + L+++++ DP + G++V
Sbjct: 654 IEKISDLKPGMVLEGTVTNVAAFGAFVDVGVHQDGLVHVSALANRFVSDPREVVKSGQVV 713
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ +P KR+ +TL+
Sbjct: 714 RVKVLEADPERKRISLTLR 732
[208][TOP]
>UniRef100_B7UKB2 Predicted transcriptional accessory protein n=1 Tax=Escherichia
coli O127:H6 str. E2348/69 RepID=B7UKB2_ECO27
Length = 773
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVLEVDLQRKRIALTMR 720
[209][TOP]
>UniRef100_B7NMH2 Transcriptional accessory protein n=1 Tax=Escherichia coli IAI39
RepID=B7NMH2_ECO7I
Length = 773
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVLKVDLQRKRIALTMR 720
[210][TOP]
>UniRef100_B7NE12 Transcriptional accessory protein n=1 Tax=Escherichia coli UMN026
RepID=B7NE12_ECOLU
Length = 773
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVLEVDLQRKRIALTMR 720
[211][TOP]
>UniRef100_B7N140 Transcriptional accessory protein n=1 Tax=Escherichia coli ED1a
RepID=B7N140_ECO81
Length = 773
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVLEVDLQRKRIALTMR 720
[212][TOP]
>UniRef100_B7LSB0 Transcriptional accessory protein n=1 Tax=Escherichia fergusonii
ATCC 35469 RepID=B7LSB0_ESCF3
Length = 773
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVLEVDLQRKRIALTMR 720
[213][TOP]
>UniRef100_B7L4T7 Transcriptional accessory protein n=1 Tax=Escherichia coli 55989
RepID=B7L4T7_ECO55
Length = 773
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVLEVDLQRKRIALTMR 720
[214][TOP]
>UniRef100_B5XTT0 S1 RNA binding domain protein n=1 Tax=Klebsiella pneumoniae 342
RepID=B5XTT0_KLEP3
Length = 776
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/79 (34%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LSD+++EDP G +V
Sbjct: 642 VETMNDLLPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSDRFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVMEVDLPRKRIALTMR 720
[215][TOP]
>UniRef100_B1LHK7 Putative transcriptional accessory protein n=1 Tax=Escherichia coli
SMS-3-5 RepID=B1LHK7_ECOSM
Length = 773
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVLEVDLQRKRIALTMR 720
[216][TOP]
>UniRef100_B1IP58 RNA binding S1 domain protein n=1 Tax=Escherichia coli ATCC 8739
RepID=B1IP58_ECOLC
Length = 773
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVLEVDLQRKRIALTMR 720
[217][TOP]
>UniRef100_A9F254 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So
ce 56' RepID=A9F254_SORC5
Length = 788
Score = 53.1 bits (126), Expect = 9e-06
Identities = 25/79 (31%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
V +EDL P M ++G V +VT G F+ + D + + L+D++++DP + VG+ +
Sbjct: 650 VRTMEDLKPGMELEGVVTNVTAFGAFVDIGVHQDGLVHVSQLADRFVKDPNEVAKVGEKI 709
Query: 237 IGRVISVEPLSKRVEVTLK 293
RV+ ++ + KR+ +T K
Sbjct: 710 KVRVLEIDLVRKRISLTAK 728
[218][TOP]
>UniRef100_A8AQW1 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC
BAA-895 RepID=A8AQW1_CITK8
Length = 776
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVLEVDLQRKRIALTMR 720
[219][TOP]
>UniRef100_A6VLW6 RNA binding S1 domain protein n=1 Tax=Actinobacillus succinogenes
130Z RepID=A6VLW6_ACTSZ
Length = 773
Score = 53.1 bits (126), Expect = 9e-06
Identities = 25/79 (31%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE I DL P M+++G + +VT G F+ + D + I LSD+++E+P + G +V
Sbjct: 642 VEDITDLQPGMILEGTITNVTNFGAFVDIGVHQDGLVHISGLSDRFVENPHQVVKTGDVV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ +R+ +T++
Sbjct: 702 KVKVLDVDVARRRIALTMR 720
[220][TOP]
>UniRef100_A3QJ52 RNA binding S1 domain protein n=1 Tax=Shewanella loihica PV-4
RepID=A3QJ52_SHELP
Length = 787
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/82 (31%), Positives = 50/82 (60%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K+ VE+I+DL +M+++G V +VT G F+ + D + I +L+D+++ DP G
Sbjct: 640 KEGVEEIKDLKVEMILEGVVTNVTNFGAFVDIGVHQDGLVHISSLTDKFVSDPHTVVKAG 699
Query: 228 KLVIGRVISVEPLSKRVEVTLK 293
+V +V+ V+ KR+ +T++
Sbjct: 700 DVVKVKVMEVDAERKRISLTMR 721
[221][TOP]
>UniRef100_A0JTC3 RNA binding S1 domain protein n=1 Tax=Arthrobacter sp. FB24
RepID=A0JTC3_ARTS2
Length = 861
Score = 53.1 bits (126), Expect = 9e-06
Identities = 24/79 (30%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+EKI DL P M+++G V +V G F+ + D + + L+++++ DP + G++V
Sbjct: 683 IEKISDLRPGMILEGTVTNVAAFGAFVDVGVHQDGLVHVSALANRFVSDPREVVKSGQVV 742
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ +P KR+ +TL+
Sbjct: 743 RVKVLEADPERKRISLTLR 761
[222][TOP]
>UniRef100_C8TJJ7 Predicted transcriptional accessory protein n=2 Tax=Escherichia
coli RepID=C8TJJ7_ECOLX
Length = 773
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVLEVDLQRKRIALTMR 720
[223][TOP]
>UniRef100_C8TCE5 YhgF like protein n=2 Tax=Klebsiella pneumoniae RepID=C8TCE5_KLEPR
Length = 776
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/79 (34%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LSD+++EDP G +V
Sbjct: 642 VETMNDLLPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSDRFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVMEVDLPRKRIALTMR 720
[224][TOP]
>UniRef100_C6JJX7 Transcriptional accessory protein n=1 Tax=Fusobacterium varium ATCC
27725 RepID=C6JJX7_FUSVA
Length = 721
Score = 53.1 bits (126), Expect = 9e-06
Identities = 28/82 (34%), Positives = 49/82 (59%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K + KIE+L M ++G V++V G F+ + K DA + I +S+++I+DP K VG
Sbjct: 638 KSDILKIENLQVGMEIEGTVRNVVKFGAFVDIGLKNDALLHISEISNKFIDDPSKVLSVG 697
Query: 228 KLVIGRVISVEPLSKRVEVTLK 293
+++ R+ V+ +RV +T K
Sbjct: 698 QIIKVRIKDVDKERERVALTKK 719
[225][TOP]
>UniRef100_C5S7F4 RNA binding S1 domain protein n=1 Tax=Allochromatium vinosum DSM
180 RepID=C5S7F4_CHRVI
Length = 781
Score = 53.1 bits (126), Expect = 9e-06
Identities = 28/92 (30%), Positives = 54/92 (58%)
Frame = +3
Query: 48 KKCVEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVG 227
K+ VE ++DL P M+++G V +VT G F+ + D + I LSD++++DP + G
Sbjct: 636 KEGVETLKDLEPGMILEGTVTNVTNFGAFVDIGVHQDGLVHISVLSDRFVKDPHEVVKSG 695
Query: 228 KLVIGRVISVEPLSKRVEVTLKTSTVSDTSKS 323
LV +V+ V+ KR+ ++ + ++ ++S
Sbjct: 696 DLVKVKVLEVDLERKRIALSRRLDEPAERTRS 727
[226][TOP]
>UniRef100_C4X1R7 Putative uncharacterized protein n=1 Tax=Klebsiella pneumoniae
NTUH-K2044 RepID=C4X1R7_KLEPN
Length = 776
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/79 (34%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LSD+++EDP G +V
Sbjct: 642 VETMNDLLPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSDRFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVMEVDLPRKRIALTMR 720
[227][TOP]
>UniRef100_C3SQ19 Putative uncharacterized protein n=1 Tax=Escherichia coli
RepID=C3SQ19_ECOLX
Length = 740
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 609 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 668
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 669 KVKVLEVDLQRKRIALTMR 687
[228][TOP]
>UniRef100_C3SQ18 Putative uncharacterized protein n=2 Tax=Escherichia coli
RepID=C3SQ18_ECOLX
Length = 740
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 609 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 668
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 669 KVKVLEVDLQRKRIALTMR 687
[229][TOP]
>UniRef100_C3SQ17 Putative uncharacterized protein n=1 Tax=Escherichia coli
RepID=C3SQ17_ECOLX
Length = 740
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 609 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 668
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 669 KVKVLEVDLQRKRIALTMR 687
[230][TOP]
>UniRef100_C2DIS9 Transcription accessory protein n=2 Tax=Escherichia coli
RepID=C2DIS9_ECOLX
Length = 773
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVLEVDLQRKRIALTMR 720
[231][TOP]
>UniRef100_B7MDN3 Transcriptional accessory protein n=4 Tax=Escherichia
RepID=B7MDN3_ECO45
Length = 773
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVLEVDLQRKRIALTMR 720
[232][TOP]
>UniRef100_B6R9E3 Transcription accessory protein n=1 Tax=Pseudovibrio sp. JE062
RepID=B6R9E3_9RHOB
Length = 818
Score = 53.1 bits (126), Expect = 9e-06
Identities = 25/79 (31%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE ++DL P M+++G V +VT G F+ + D + + L+D++++DP G +V
Sbjct: 663 VETMQDLKPGMMLEGTVTNVTNFGAFVDIGVHQDGLVHVSQLADRFVDDPHTVVKAGDIV 722
Query: 237 IGRVISVEPLSKRVEVTLK 293
RV+ V+ KR+ +T++
Sbjct: 723 KVRVVEVDIARKRIGLTMR 741
[233][TOP]
>UniRef100_C6VBB7 Predicted transcriptional accessory protein n=4 Tax=Escherichia
coli RepID=C6VBB7_ECOBD
Length = 772
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 641 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 700
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 701 KVKVLEVDLQRKRIALTMR 719
[234][TOP]
>UniRef100_B3WVW9 Putative transcriptional accessory protein n=1 Tax=Shigella
dysenteriae 1012 RepID=B3WVW9_SHIDY
Length = 773
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVLEVDLQRKRIALTMR 720
[235][TOP]
>UniRef100_B3IJF0 Putative transcriptional accessory protein n=1 Tax=Escherichia coli
E110019 RepID=B3IJF0_ECOLX
Length = 773
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVLEVDLQRKRIALTMR 720
[236][TOP]
>UniRef100_C8TY23 Predicted transcriptional accessory protein n=5 Tax=Escherichia
RepID=C8TY23_ECOLX
Length = 773
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVLEVDLQRKRIALTMR 720
[237][TOP]
>UniRef100_Q0TC60 Protein YhgF (S1 RNA binding domain) n=2 Tax=Escherichia coli
RepID=Q0TC60_ECOL5
Length = 773
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVLEVDLQRKRIALTMR 720
[238][TOP]
>UniRef100_A8A5L5 Protein yhgF n=5 Tax=Enterobacteriaceae RepID=A8A5L5_ECOHS
Length = 773
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVLEVDLQRKRIALTMR 720
[239][TOP]
>UniRef100_B3AWA6 Putative transcriptional accessory protein n=3 Tax=Escherichia coli
O157:H7 RepID=B3AWA6_ECO57
Length = 773
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVLEVDLQRKRIALTMR 720
[240][TOP]
>UniRef100_C6UVH2 Predicted transcriptional accessory protein n=8 Tax=Escherichia
coli O157:H7 RepID=C6UVH2_ECO5T
Length = 773
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVLEVDLQRKRIALTMR 720
[241][TOP]
>UniRef100_B2N8X3 Putative transcriptional accessory protein n=1 Tax=Escherichia coli
53638 RepID=B2N8X3_ECOLX
Length = 773
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVLEVDLQRKRIALTMR 720
[242][TOP]
>UniRef100_B1EI58 Putative transcriptional accessory protein n=1 Tax=Escherichia
albertii TW07627 RepID=B1EI58_9ESCH
Length = 773
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVLEVDLQRKRIALTMR 720
[243][TOP]
>UniRef100_A9CY62 Putative uncharacterized protein n=1 Tax=Shewanella benthica KT99
RepID=A9CY62_9GAMM
Length = 790
Score = 53.1 bits (126), Expect = 9e-06
Identities = 25/79 (31%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VEK+ L PDM+++G V +VT G F+ + D + I +L+D+++ DP G +V
Sbjct: 660 VEKVNHLKPDMILEGVVTNVTNFGAFVDVGVHQDGLVHISSLTDKFVSDPHTLVKAGDVV 719
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ ++ KR+ +T++
Sbjct: 720 KVKVMEIDVERKRIALTMR 738
[244][TOP]
>UniRef100_A8E1C0 Putative transcriptional accessory protein n=1 Tax=Neisseria
animalis RepID=A8E1C0_NEIAN
Length = 762
Score = 53.1 bits (126), Expect = 9e-06
Identities = 24/79 (30%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
+ +I+DL P M+++G V +V G F+ + D + I LSD++++DP + G +V
Sbjct: 631 INEIKDLQPGMILEGVVSNVANFGAFVDIGVHQDGLVHISALSDKFVQDPREVVKAGDVV 690
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 691 KVKVLEVDAARKRIALTMR 709
[245][TOP]
>UniRef100_P46837 Protein yhgF n=5 Tax=Escherichia coli RepID=YHGF_ECOLI
Length = 773
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +3
Query: 57 VEKIEDLHPDMVVKGYVKSVTPKGCFIILSRKIDARILIPNLSDQYIEDPEKEFPVGKLV 236
VE + DL P M+++G V +VT G F+ + D + I +LS++++EDP G +V
Sbjct: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701
Query: 237 IGRVISVEPLSKRVEVTLK 293
+V+ V+ KR+ +T++
Sbjct: 702 KVKVLEVDLQRKRIALTMR 720