[UP]
[1][TOP]
>UniRef100_Q2HRG4 Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HRG4_MEDTR
Length = 1378
Score = 85.9 bits (211), Expect = 1e-15
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 1/151 (0%)
Frame = -2
Query: 496 RMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLG-GDALRAEIAALKHGLTLLWNA 320
+++ DG + G GG+ RD G W+ GFY GSLG ++AE+ A+ GL W+
Sbjct: 1184 KLNVDGCCMDNPRSAGYGGLFRDVDGNWLGGFY-GSLGFTTKMKAELYAICQGLITAWDF 1242
Query: 319 HVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAADC 140
R E D L+ ++ +E + A S + DIR L+ R+W++ L + +E NA AD
Sbjct: 1243 GYRNILVETDYLEAIKHIEEANIEHDAYGSLVADIRSLMQRNWSLNLDHSLKEDNACADI 1302
Query: 139 LAGLGASLLCPLTCLESPPQELQPILARDLL 47
L+ +GA PPQ+LQ L D L
Sbjct: 1303 LSRIGAEQHEVYCFHAYPPQQLQLALMADAL 1333
[2][TOP]
>UniRef100_B9HMY3 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HMY3_POPTR
Length = 227
Score = 84.0 bits (206), Expect = 6e-15
Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 2/120 (1%)
Frame = -2
Query: 457 RMGMGGIVRDAHGAWISGFYAGSLGG--DALRAEIAALKHGLTLLWNAHVRRATCEVDCL 284
++G+GG+VRD G W+ GF S+GG L E+ +KHGL L WN R+ C +D +
Sbjct: 100 KIGLGGLVRDNEGKWLVGF--SSIGGFDTNLLPELLDIKHGLVLAWNQGYRKIICNLDSI 157
Query: 283 DIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAADCLAGLGASLLCPL 104
+ + + + F L ++D + LL R+W V L ++ REAN+ AD +A GA L +
Sbjct: 158 NASRRIHDGNFIFQKLGVVIVDTKKLLSREWEVHLLHLLREANSCADFMAKHGARNLAEI 217
[3][TOP]
>UniRef100_A2Q624 Ribonuclease H n=1 Tax=Medicago truncatula RepID=A2Q624_MEDTR
Length = 235
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/154 (30%), Positives = 77/154 (50%)
Frame = -2
Query: 493 MDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLWNAHV 314
++ DG D + GG++RD +++ GF+ + L EI+ L HGL L W+ +
Sbjct: 80 LNVDGNVFLDSNLGSFGGLIRDHTSSFLHGFFGKNSRPCILHVEISGLYHGLKLCWDIGI 139
Query: 313 RRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAADCLA 134
+ C D +V+ ++ D H + ++ I+ LL RDW V+L + E NAAAD LA
Sbjct: 140 KHVVCHSDSTTVVDLVQKDLNVHHKYGNLIMAIKKLLRRDWVVSLRHTLCEGNAAADFLA 199
Query: 133 GLGASLLCPLTCLESPPQELQPILARDLLAL*FL 32
GA L L P ++ +L D + + F+
Sbjct: 200 KKGALSDTSLVILNEAPPDIAFVLLADAVGVKFV 233
[4][TOP]
>UniRef100_B9HFN7 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HFN7_POPTR
Length = 245
Score = 83.2 bits (204), Expect = 9e-15
Identities = 53/153 (34%), Positives = 77/153 (50%), Gaps = 3/153 (1%)
Frame = -2
Query: 496 RMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLWNAH 317
+++ DG K + G GG++RD GAWI GF ++ AE+ A+ GL L W+
Sbjct: 85 KLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLAWDRG 144
Query: 316 VRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAADCL 137
R+ E D +V + D + + ++ I+ +L RDW VT +V REAN AD L
Sbjct: 145 FRKVDLESDSKVVVGLINGDSVRVDRNYNIIMQIKGMLGRDWEVTTYHVYREANCVADWL 204
Query: 136 AGLGAS---LLCPLTCLESPPQELQPILARDLL 47
A G + L LE PP L P+L DL+
Sbjct: 205 ANYGLTRDLLDRGSDVLEEPPSGLYPLLYYDLI 237
[5][TOP]
>UniRef100_B9N0S8 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N0S8_POPTR
Length = 244
Score = 82.8 bits (203), Expect = 1e-14
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 5/160 (3%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLW 326
G ++++D ++K+ + + G+ RD HG W+ GF A AE+ A++ L L W
Sbjct: 57 GFVKLNTDASYKYISSKSSIAGVCRDEHGIWLFGFSCRVKSESAFEAELLAVREALKLAW 116
Query: 325 NAHVRRATCEVDCLDIVEALEND-----RYQFHALASELLDIRLLLDRDWTVTLAYVPRE 161
+ +++ E D ++V+ + N + QF A+ +L+ + ++RDW + + RE
Sbjct: 117 DKGLKKVILESDSENVVKRIRNQVTRQPKNQFEAV---ILECQAYVNRDWDCFIQHTLRE 173
Query: 160 ANAAADCLAGLGASLLCPLTCLESPPQELQPILARDLLAL 41
N AAD L +G S L + PP+ L IL D + +
Sbjct: 174 GNFAADALTKIGISESFELHVWKHPPESLSLILLADKIGM 213
[6][TOP]
>UniRef100_B9MXX8 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9MXX8_POPTR
Length = 248
Score = 82.8 bits (203), Expect = 1e-14
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 2/157 (1%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLW 326
G ++++D ++K++ + + G+ RD HG W+ GF + G A AE+ A++ L L W
Sbjct: 61 GFVKLNTDASYKYNCSKSSVAGVCRDEHGIWLFGFSSRVKSGSAFEAELLAVREALKLAW 120
Query: 325 NAHVRRATCEVDCLDIVEALEND--RYQFHALASELLDIRLLLDRDWTVTLAYVPREANA 152
+ ++R E D +V + N R + + + +L+ + + R+W L + RE N
Sbjct: 121 DKGLKRVIVESDSESVVNRIRNQLTRQPKNQIEAVILECQSYVSREWNCFLQHTHREGNF 180
Query: 151 AADCLAGLGASLLCPLTCLESPPQELQPILARDLLAL 41
AAD L + S L PP+ L IL D + +
Sbjct: 181 AADALTKIIISESFELHVFNHPPKSLSLILLADKIGM 217
[7][TOP]
>UniRef100_Q2HX34 LINE-type retrotransposon LIb DNA, complete sequence, Insertion at
the SCL6 site n=1 Tax=Ipomoea batatas RepID=Q2HX34_IPOBA
Length = 1366
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/156 (31%), Positives = 77/156 (49%)
Frame = -2
Query: 508 SGEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLL 329
+G +++SDGA K GG++R+ +G W++G+ ++ AE+ L+ GL L
Sbjct: 1205 AGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYICNIGTANSFLAELWGLREGLLLA 1264
Query: 328 WNAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAA 149
N + E D +V+ L D + + D +LLLD + + ++ RE N
Sbjct: 1265 KNRGFTKLIAETDSEAVVQVLRKDGPVTPDASILVKDCKLLLDHFQEIKVTHILREGNQC 1324
Query: 148 ADCLAGLGASLLCPLTCLESPPQELQPILARDLLAL 41
AD LA LG S T LE PP +L+ L RD + L
Sbjct: 1325 ADFLANLGQSSSWGTTILERPPDDLRIFLQRDAIGL 1360
[8][TOP]
>UniRef100_Q2HX37 LINE-type retrotransposon LIb DNA, complete sequence, Insertion at
the S14 site n=1 Tax=Ipomoea batatas RepID=Q2HX37_IPOBA
Length = 1366
Score = 81.6 bits (200), Expect = 3e-14
Identities = 49/156 (31%), Positives = 77/156 (49%)
Frame = -2
Query: 508 SGEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLL 329
+G +++SDGA K GG++R+ +G W++G+ ++ AE+ L+ GL L
Sbjct: 1205 AGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELWGLREGLLLA 1264
Query: 328 WNAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAA 149
N + E D +V+ L D + + D +LLLD + + ++ RE N
Sbjct: 1265 KNRGFTKLIAETDSEAVVQVLRKDGPVTPDASILVKDCKLLLDHFQEIKVTHILREGNQC 1324
Query: 148 ADCLAGLGASLLCPLTCLESPPQELQPILARDLLAL 41
AD LA LG S T LE PP +L+ L RD + L
Sbjct: 1325 ADFLANLGQSSSWGTTILERPPDDLRIFLQRDAIGL 1360
[9][TOP]
>UniRef100_Q2HX35 LINE-type retrotransposon LIb DNA, complete sequence, Insertion at
the S11 site n=1 Tax=Ipomoea batatas RepID=Q2HX35_IPOBA
Length = 1898
Score = 81.6 bits (200), Expect = 3e-14
Identities = 49/156 (31%), Positives = 77/156 (49%)
Frame = -2
Query: 508 SGEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLL 329
+G +++SDGA K GG++R+ +G W++G+ ++ AE+ L+ GL L
Sbjct: 1737 AGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELWGLREGLLLA 1796
Query: 328 WNAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAA 149
N + E D +V+ L D + + D +LLLD + + ++ RE N
Sbjct: 1797 KNRGFTKLIAETDSEAVVQVLRKDGPVTPDASILVKDCKLLLDHFQEIKVTHILREGNQC 1856
Query: 148 ADCLAGLGASLLCPLTCLESPPQELQPILARDLLAL 41
AD LA LG S T LE PP +L+ L RD + L
Sbjct: 1857 ADFLANLGQSSSWGTTILERPPDDLRIFLQRDAIGL 1892
[10][TOP]
>UniRef100_Q2HTL5 Ribonuclease H (Fragment) n=1 Tax=Medicago truncatula
RepID=Q2HTL5_MEDTR
Length = 233
Score = 81.6 bits (200), Expect = 3e-14
Identities = 53/159 (33%), Positives = 87/159 (54%), Gaps = 2/159 (1%)
Frame = -2
Query: 502 EYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSL--GGDALRAEIAALKHGLTLL 329
++ ++ DG+ R G GG++R++ G +ISGF +G + D L AE+ A+ GL L+
Sbjct: 75 DFILNVDGSCIGTPPRTGYGGVLRNSAGLFISGF-SGLIPNSADILLAELTAIHQGLKLV 133
Query: 328 WNAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAA 149
+ +V C D L V + ND ++H A+ + +I+ LL+ D ++L + RE N
Sbjct: 134 TDLNVNEIMCYSDSLLAVNLIANDTPRYHIYAALIQNIKDLLN-DRNISLHHTLREGNQC 192
Query: 148 ADCLAGLGASLLCPLTCLESPPQELQPILARDLLAL*FL 32
AD A GA+ L +SPP +L P+L D L + F+
Sbjct: 193 ADFFAKFGANSDAALVVHQSPPADLLPLLRADALGIYFV 231
[11][TOP]
>UniRef100_B9IKN0 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IKN0_POPTR
Length = 245
Score = 81.3 bits (199), Expect = 4e-14
Identities = 52/153 (33%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Frame = -2
Query: 496 RMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLWNAH 317
+++ DG K + G GG++R+ GAWI GF ++ AE+ A+ GL L W+
Sbjct: 85 KLNVDGCSKGNPGVAGAGGVIREHLGAWIGGFARNIDICSSVNAELWAVYVGLQLAWDRG 144
Query: 316 VRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAADCL 137
R+ E D +V + D + + ++ I+ +L RDW VT +V REAN AD L
Sbjct: 145 FRKVDLESDSKVVVGLINGDSVRVDRNYNIIMQIKDMLGRDWEVTTYHVYREANCVADWL 204
Query: 136 AGLGAS---LLCPLTCLESPPQELQPILARDLL 47
A G S L LE PP L P+ DL+
Sbjct: 205 ANYGLSRDLLDRGSDVLEEPPSGLYPLFYYDLI 237
[12][TOP]
>UniRef100_Q9FG26 Non-LTR retroelement reverse transcriptase-like n=1 Tax=Arabidopsis
thaliana RepID=Q9FG26_ARATH
Length = 676
Score = 79.3 bits (194), Expect = 1e-13
Identities = 50/157 (31%), Positives = 76/157 (48%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLW 326
G M++DGA + + GG++RD HG+W+ GF A AE+ + +GL + W
Sbjct: 514 GWVTMNTDGASHGNPGQATAGGVIRDEHGSWLVGFALNIGVCSAPLAELWGVYYGLVVAW 573
Query: 325 NAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAA 146
RR EVD +V L++ H LA + + +DW V + +V REAN A
Sbjct: 574 ERGWRRVRLEVDSALVVGFLQSGIGDSHPLAFLVRLCHGFISKDWIVRITHVYREANRLA 633
Query: 145 DCLAGLGASLLCPLTCLESPPQELQPILARDLLAL*F 35
D LA +L L+S P+ + IL D++ F
Sbjct: 634 DGLANYAFTLPFGFLLLDSCPEHVSSILLEDVMGTSF 670
[13][TOP]
>UniRef100_B9HV70 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HV70_POPTR
Length = 245
Score = 77.4 bits (189), Expect = 5e-13
Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Frame = -2
Query: 496 RMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLWNAH 317
+++ DG K + G GG++RD GAWI GF ++ AE+ A+ GL L W+
Sbjct: 85 KLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLAWDRG 144
Query: 316 VRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAADCL 137
R+ E D +V + D + + ++ I+ +L R+W VT +V REAN AD L
Sbjct: 145 FRKVDLESDSKVVVGLINGDSVRVDRNYNIIMQIKGMLGRNWEVTTYHVYREANCVADWL 204
Query: 136 AGLGAS---LLCPLTCLESPPQELQPILARDLL 47
A G + L LE P L P+L DL+
Sbjct: 205 ANYGLTRDLLDRGSDVLEELPSGLYPLLYYDLI 237
[14][TOP]
>UniRef100_Q2PEU3 Putative uncharacterized protein n=1 Tax=Trifolium pratense
RepID=Q2PEU3_TRIPR
Length = 553
Score = 77.0 bits (188), Expect = 7e-13
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 1/156 (0%)
Frame = -2
Query: 505 GEY-RMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLL 329
G Y ++++DGA K D +R G GGI+R + G W+ GF G A+ AE+ + GL+
Sbjct: 391 GSYVKLNTDGACK-DQNRGGCGGIIRGSQGEWLGGFARGLGNCSAIIAELWGVAEGLSYA 449
Query: 328 WNAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAA 149
VD + +V+A++ R+ + IR +LD DW + + + RE+N
Sbjct: 450 RRLGFTAVELNVDSVVVVQAIKTGRFSSSVGLPLVKHIRRMLDLDWEIKIEHAYRESNKC 509
Query: 148 ADCLAGLGASLLCPLTCLESPPQELQPILARDLLAL 41
AD +A +G L +S P ++ +L D L +
Sbjct: 510 ADAMANIGCHLDRETIFYDSCPISIKELLLADELGI 545
[15][TOP]
>UniRef100_Q9SJZ8 Putative non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=Q9SJZ8_ARATH
Length = 321
Score = 76.6 bits (187), Expect = 9e-13
Identities = 52/152 (34%), Positives = 73/152 (48%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLW 326
G ++++DGA + + GG++RD +GAWI GF A AE+ + +GL + W
Sbjct: 159 GWVKLNTDGASRGNPGFATAGGVLRDHNGAWIGGFAVNIGVCSAPLAELWGVYYGLFIAW 218
Query: 325 NAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAA 146
RR EVD +V L H L+ L L + W V +++V REAN A
Sbjct: 219 GRGARRVELEVDSKMVVGFLTTGIADSHPLSFLLRLCYDFLSKGWIVRISHVYREANRLA 278
Query: 145 DCLAGLGASLLCPLTCLESPPQELQPILARDL 50
D LA SL L LES P + IL D+
Sbjct: 279 DGLANYAFSLSLGLHLLESRPDVVSSILLDDV 310
[16][TOP]
>UniRef100_Q2HU20 Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HU20_MEDTR
Length = 220
Score = 74.7 bits (182), Expect = 3e-12
Identities = 56/165 (33%), Positives = 79/165 (47%), Gaps = 2/165 (1%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLW 326
G +++SDGA K G GG+ RD G WI G+ DAL AE+ L GL + W
Sbjct: 58 GLIKLNSDGACKDMGVIAGCGGLFRDLDGRWIKGYTKKIGACDALHAEMWGLYLGLDMAW 117
Query: 325 NAHVRRATCEVDCLDIVEALENDRYQFHALASELL-DIRLLLDRDWTVTLAYVPREANAA 149
H E D +++ + +D ++F+ L+ IR LL W V L + RE N +
Sbjct: 118 REHYSHLIVESDSKILIDMI-SDNFKFNGNIPVLVYRIRKLLKTSWNVQLNHTWREGNRS 176
Query: 148 ADCLAGLGASLL-CPLTCLESPPQELQPILARDLLAL*FLFLACL 17
AD LA L S LESPP E+ ++ + + LACL
Sbjct: 177 ADWLANLSISTYHFNFIVLESPPCEV-----KESFLMIYSGLACL 216
[17][TOP]
>UniRef100_Q1SMZ7 Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q1SMZ7_MEDTR
Length = 438
Score = 74.3 bits (181), Expect = 4e-12
Identities = 51/159 (32%), Positives = 85/159 (53%), Gaps = 2/159 (1%)
Frame = -2
Query: 502 EYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGG--DALRAEIAALKHGLTLL 329
++ ++ DG+ R G GGI+R++ G +ISGF +G + D L+AE+ A+ L ++
Sbjct: 280 DHILNVDGSCLGTPSRTGYGGILRNSAGLFISGF-SGFIPNSTDILQAELTAIHQSLHMV 338
Query: 328 WNAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAA 149
++++ C D L V + ND ++H A + +I+ LL +TL + RE N
Sbjct: 339 IDSNMNDVMCYSDSLLAVNLIMNDTPRYHTYAVLIQNIKDLLSVR-NITLHHTLREGNQC 397
Query: 148 ADCLAGLGASLLCPLTCLESPPQELQPILARDLLAL*FL 32
AD A LGA+ L +SPP +L P+L D + F+
Sbjct: 398 ADFFAKLGANSDVHLVVHQSPPADLLPLLRADAIGTVFI 436
[18][TOP]
>UniRef100_Q9FMM8 Non-LTR retroelement reverse transcriptase-like protein n=1
Tax=Arabidopsis thaliana RepID=Q9FMM8_ARATH
Length = 308
Score = 73.6 bits (179), Expect = 7e-12
Identities = 48/153 (31%), Positives = 67/153 (43%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLW 326
G ++++DGA + + GG++RD GAW GF A AE+ + +GL W
Sbjct: 146 GWVKVNTDGASRGNPGLASAGGVLRDCEGAWCGGFSLNIGRCSAQHAELWGVYYGLYFAW 205
Query: 325 NAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAA 146
V R EVD IV L+ H L+ + L +DW V + YV REAN A
Sbjct: 206 EKKVPRVELEVDSEAIVGFLKTGISDSHPLSFLVRLCHNFLQKDWLVRIVYVYREANCLA 265
Query: 145 DCLAGLGASLLCPLTCLESPPQELQPILARDLL 47
D LA L + P + +L D L
Sbjct: 266 DGLANYTILLSLGFHSFDFVPDAMSSLLKEDTL 298
[19][TOP]
>UniRef100_Q9ZUY7 Putative reverse transcriptase n=1 Tax=Arabidopsis thaliana
RepID=Q9ZUY7_ARATH
Length = 314
Score = 73.2 bits (178), Expect = 1e-11
Identities = 49/151 (32%), Positives = 72/151 (47%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLW 326
G +++++DGA + + GG++RD GAW GF A AE+ + +GL + W
Sbjct: 152 GWWKLNTDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGVYYGLYIAW 211
Query: 325 NAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAA 146
V R EVD +V L+ + H L+ + + RDW V +++V REAN A
Sbjct: 212 ERRVTRLEIEVDSEIVVGFLKIGINEVHPLSFLVRLCHDFISRDWRVRISHVYREANRLA 271
Query: 145 DCLAGLGASLLCPLTCLESPPQELQPILARD 53
D LA SL L P L+ IL D
Sbjct: 272 DGLANYAFSLPLGFHSLSLVPDSLRFILLDD 302
[20][TOP]
>UniRef100_Q1PEZ4 Putative uncharacterized protein n=1 Tax=Arabidopsis thaliana
RepID=Q1PEZ4_ARATH
Length = 314
Score = 73.2 bits (178), Expect = 1e-11
Identities = 49/151 (32%), Positives = 72/151 (47%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLW 326
G +++++DGA + + GG++RD GAW GF A AE+ + +GL + W
Sbjct: 152 GWWKLNTDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGVYYGLYIAW 211
Query: 325 NAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAA 146
V R EVD +V L+ + H L+ + + RDW V +++V REAN A
Sbjct: 212 ERRVTRLEIEVDSEIVVGFLKIXINEVHPLSFLVRLCHDFISRDWRVRISHVYREANRLA 271
Query: 145 DCLAGLGASLLCPLTCLESPPQELQPILARD 53
D LA SL L P L+ IL D
Sbjct: 272 DGLANYAFSLPLGFHSLSLVPDSLRFILLDD 302
[21][TOP]
>UniRef100_A2Q681 Ribonuclease H n=1 Tax=Medicago truncatula RepID=A2Q681_MEDTR
Length = 170
Score = 73.2 bits (178), Expect = 1e-11
Identities = 46/148 (31%), Positives = 70/148 (47%)
Frame = -2
Query: 496 RMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLWNAH 317
+++ DG+ + R G GG++R+ G WI GF L E+ A+ +GL L W+
Sbjct: 13 KINVDGSSFGNPGRAGFGGLIRNDVGGWIHGFSESCGRVSNLLVELYAILNGLQLAWDLG 72
Query: 316 VRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAADCL 137
R T E D ++ + ++ +H A L IR L+ RDW++ + RE N AD L
Sbjct: 73 FRIITLEPDYKSALDLILDNDTTYHPHAIVLGRIRTLMSRDWSLLFNHTLREGNECADWL 132
Query: 136 AGLGASLLCPLTCLESPPQELQPILARD 53
A A L SPP + +L D
Sbjct: 133 AKYDAQSDVSLKLWVSPPPQFAHVLLAD 160
[22][TOP]
>UniRef100_A0MEQ4 Putative uncharacterized protein (Fragment) n=1 Tax=Arabidopsis
thaliana RepID=A0MEQ4_ARATH
Length = 315
Score = 73.2 bits (178), Expect = 1e-11
Identities = 49/151 (32%), Positives = 72/151 (47%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLW 326
G +++++DGA + + GG++RD GAW GF A AE+ + +GL + W
Sbjct: 152 GWWKLNTDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGVYYGLYIAW 211
Query: 325 NAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAA 146
V R EVD +V L+ + H L+ + + RDW V +++V REAN A
Sbjct: 212 ERRVTRLEIEVDSEIVVGFLKIGINEVHPLSFLVRLCHDFISRDWRVRISHVYREANRLA 271
Query: 145 DCLAGLGASLLCPLTCLESPPQELQPILARD 53
D LA SL L P L+ IL D
Sbjct: 272 DGLANYAFSLPLGFHSLSLVPDSLRFILLDD 302
[23][TOP]
>UniRef100_O82276 Putative non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=O82276_ARATH
Length = 1231
Score = 72.4 bits (176), Expect = 2e-11
Identities = 44/152 (28%), Positives = 73/152 (48%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLW 326
G ++ +DGA + + GG +R+ G W+ GF A AE+ +GL + W
Sbjct: 1069 GWVKITTDGASRGNHGLAAAGGAIRNGQGEWLGGFALNIGSCAAPLAELWGAYYGLLIAW 1128
Query: 325 NAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAA 146
+ RR ++DC +V L H L+ + + RDW V +++V REAN A
Sbjct: 1129 DKGFRRVELDLDCKLVVGFLSTGVSNAHPLSFLVRLCQGFFTRDWLVRVSHVYREANRLA 1188
Query: 145 DCLAGLGASLLCPLTCLESPPQELQPILARDL 50
D LA +L L C ++ P+ ++ +L D+
Sbjct: 1189 DGLANYAFTLPLGLHCFDACPEGVRLLLLADV 1220
[24][TOP]
>UniRef100_P0C2F6 Putative ribonuclease H protein At1g65750 n=1 Tax=Arabidopsis
thaliana RepID=RNHX1_ARATH
Length = 620
Score = 72.4 bits (176), Expect = 2e-11
Identities = 48/153 (31%), Positives = 69/153 (45%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLW 326
G ++++DGA + + GG++RD GAW GF A +AE+ + +GL W
Sbjct: 458 GWVKVNTDGASRGNPGLASAGGVLRDCTGAWCGGFSLNIGRCSAPQAELWGVYYGLYFAW 517
Query: 325 NAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAA 146
V R EVD IV L+ H L+ + L +DW V + +V REAN A
Sbjct: 518 EKKVPRVELEVDSEVIVGFLKTGISDSHPLSFLVRLCHGFLQKDWLVRIVHVYREANRLA 577
Query: 145 DCLAGLGASLLCPLTCLESPPQELQPILARDLL 47
D LA SL + P + +L D L
Sbjct: 578 DGLANYAFSLSLGFHSFDLVPDAMSSLLREDTL 610
[25][TOP]
>UniRef100_A5BWY9 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5BWY9_VITVI
Length = 395
Score = 72.0 bits (175), Expect = 2e-11
Identities = 53/153 (34%), Positives = 72/153 (47%), Gaps = 1/153 (0%)
Frame = -2
Query: 508 SGEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLL 329
+G +++ DG+FK R G GG++RDA G++I+ F ++L AEI AL+ GL L
Sbjct: 232 AGWVKLNFDGSFKGRTGRAGGGGLLRDAQGSFIAAFATPLDTSNSLMAEIGALEGGLRLA 291
Query: 328 WNAHVRRATCEVDCLDIVEALENDRYQFHALASELL-DIRLLLDRDWTVTLAYVPREANA 152
+V R E D +E L R L+ IR LL VT + REAN
Sbjct: 292 LKLNVERILIEGDSKITIEMLSGKREXTXEEEKSLMTHIRELLQGFQEVTARHEFREANR 351
Query: 151 AADCLAGLGASLLCPLTCLESPPQELQPILARD 53
AD LA + P+ PP L P L D
Sbjct: 352 PADHLANIATQAHEPMEWHPHPPHSLLPFLHHD 384
[26][TOP]
>UniRef100_Q9SI81 F23N19.5 n=1 Tax=Arabidopsis thaliana RepID=Q9SI81_ARATH
Length = 233
Score = 67.4 bits (163), Expect = 5e-10
Identities = 48/155 (30%), Positives = 68/155 (43%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLW 326
G ++++DGA + GG +R+ +G W GF A AE+ + +GL + W
Sbjct: 71 GWCKLNTDGASHGNPGLATAGGALRNEYGEWCFGFALNIGRCLAPLAELWGVYYGLFMAW 130
Query: 325 NAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAA 146
+ + R EVD +V L H L+ + L RDW V + +V REAN A
Sbjct: 131 DRGITRLELEVDSEMVVGFLRTGIGSSHPLSFLVRMCHGFLSRDWIVRIGHVYREANRLA 190
Query: 145 DCLAGLGASLLCPLTCLESPPQELQPILARDLLAL 41
D LA L SPP L IL D L +
Sbjct: 191 DGLANYAFDLPLGYHAFASPPNSLDSILRDDELGI 225
[27][TOP]
>UniRef100_Q9FXC8 F12A21.24 n=1 Tax=Arabidopsis thaliana RepID=Q9FXC8_ARATH
Length = 803
Score = 67.4 bits (163), Expect = 5e-10
Identities = 48/154 (31%), Positives = 67/154 (43%)
Frame = -2
Query: 508 SGEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLL 329
+G Y+ A + + GG++RD G W GF A AE+ + +G L
Sbjct: 640 NGHYQTKKKSASRGNPGLATAGGVIRDGAGNWCGGFALNIGRCSAPLAELWGVYYGFYLA 699
Query: 328 WNAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAA 149
W + R EVD +V L+ H L+ + LL +DW V + +V REAN
Sbjct: 700 WTKALTRVELEVDSELVVGFLKTGIGDQHPLSFLVRLCHGLLSKDWIVRITHVYREANRL 759
Query: 148 ADCLAGLGASLLCPLTCLESPPQELQPILARDLL 47
AD LA SL L P +L+ IL D L
Sbjct: 760 ADGLANYAFSLPLGFHSLIDVPDDLEVILHEDSL 793
[28][TOP]
>UniRef100_Q9LQJ0 F28G4.15 protein n=1 Tax=Arabidopsis thaliana RepID=Q9LQJ0_ARATH
Length = 272
Score = 65.5 bits (158), Expect = 2e-09
Identities = 45/152 (29%), Positives = 69/152 (45%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLW 326
G +++++DGA + + GG+VRD G W GF A AE+ +GL + W
Sbjct: 110 GWFKLNTDGASRGNPRLATAGGVVRDGDGNWCYGFSLNIGICSAPLAELWGAYYGLNIAW 169
Query: 325 NAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAA 146
V + E+D +V L H L+ + LL +DW+V +++V REAN A
Sbjct: 170 ERGVTQLEMEIDSEMVVGFLRTGIDDSHPLSFLVRLCHGLLSKDWSVRISHVYREANRLA 229
Query: 145 DCLAGLGASLLCPLTCLESPPQELQPILARDL 50
D LA L S P + I+ D+
Sbjct: 230 DGLANYAFFLPLGFHLFNSTPDIVMSIVHDDV 261
[29][TOP]
>UniRef100_Q9LNS0 F1L3.4 n=1 Tax=Arabidopsis thaliana RepID=Q9LNS0_ARATH
Length = 253
Score = 65.5 bits (158), Expect = 2e-09
Identities = 45/152 (29%), Positives = 69/152 (45%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLW 326
G +++++DGA + + GG+VRD G W GF A AE+ +GL + W
Sbjct: 91 GWFKLNTDGASRGNPRLATAGGVVRDGDGNWCYGFSLNIGICSAPLAELWGAYYGLNIAW 150
Query: 325 NAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAA 146
V + E+D +V L H L+ + LL +DW+V +++V REAN A
Sbjct: 151 ERGVTQLEMEIDSEMVVGFLRTGIDDSHPLSFLVRLCHGLLSKDWSVRISHVYREANRLA 210
Query: 145 DCLAGLGASLLCPLTCLESPPQELQPILARDL 50
D LA L S P + I+ D+
Sbjct: 211 DGLANYAFFLPLGFHLFNSTPDIVMSIVHDDV 242
[30][TOP]
>UniRef100_B9RKW4 Nuclease, putative n=1 Tax=Ricinus communis RepID=B9RKW4_RICCO
Length = 145
Score = 65.1 bits (157), Expect = 3e-09
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLW 326
G +++++DG K + GGI+RD++G W+ GF D + AE+ A G++L W
Sbjct: 2 GGFKLNTDGISKDYGAKARGGGIIRDSNGCWVGGFVIHIGACDPVGAELWAFLQGISLAW 61
Query: 325 NAHVRRATCEVDCLDIVEALENDRY--QFHA-LASELLDIRLLLDRDWTVTLAYVPREAN 155
+ + EVD + + + HA L S LD LL W V + +V RE N
Sbjct: 62 SKGIHNLIVEVDSSLVADWMNKKSVCKSIHANLVSACLD---LLQNWWDVKIKHVFREMN 118
Query: 154 AAADCLAGLGASLLCPLTCLESPPQE 77
AD LA + + + L+ P +
Sbjct: 119 QVADSLANIVFAFAVRIHVLDEMPSD 144
[31][TOP]
>UniRef100_A2PZD6 Putative uncharacterized protein In06 (Fragment) n=1 Tax=Ipomoea
nil RepID=A2PZD6_IPONI
Length = 212
Score = 65.1 bits (157), Expect = 3e-09
Identities = 41/137 (29%), Positives = 62/137 (45%)
Frame = -2
Query: 493 MDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLWNAHV 314
++ DG+ K + G+GG +R+ G W+ GF E A+ G+ LW V
Sbjct: 49 LNIDGSVKASTNNAGIGGALREDKGTWLGGFAYKIPLETPEAIEAKAIVLGMQWLWERGV 108
Query: 313 RRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAADCLA 134
R A + D +VE ++ + + + RL L +DW +++ V RE N AD LA
Sbjct: 109 REAEIQSDARKVVEWIQASDNLRGPIQGIIEEARLWLTKDWKISIRAVYREQNRVADALA 168
Query: 133 GLGASLLCPLTCLESPP 83
G GA T S P
Sbjct: 169 GYGAFQSDAWTTFSSRP 185
[32][TOP]
>UniRef100_Q2HUI8 Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HUI8_MEDTR
Length = 208
Score = 64.7 bits (156), Expect = 3e-09
Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 3/156 (1%)
Frame = -2
Query: 493 MDSDGAFKHDDDRMGMGGIVRDAHGAWIS---GFYAGSLGGDALRAEIAALKHGLTLLWN 323
++ DG+ R G GGI+R++ G ++S GF A S D L AE+ A+ G ++ +
Sbjct: 53 LNVDGSCSGIPTRAGYGGIIRNSAGLYLSCFSGFIADST--DILLAELTAIHRGFSIASD 110
Query: 322 AHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAAD 143
V C D L + + ++HA A + DI+ LL ++ + RE N AD
Sbjct: 111 MGVNEMACYSDSLLSINLITGQASKYHAYAVLIQDIKDLLS-SHNFSIQHCLREGNQCAD 169
Query: 142 CLAGLGASLLCPLTCLESPPQELQPILARDLLAL*F 35
+A GAS SPPQ+L +L D + F
Sbjct: 170 FMAKFGASSNNVCFIHPSPPQDLHVLLRNDAIGTCF 205
[33][TOP]
>UniRef100_B2BXY8 Non-LTR retrotransposon transposase n=1 Tax=Arabidopsis cebennensis
RepID=B2BXY8_9BRAS
Length = 799
Score = 64.7 bits (156), Expect = 3e-09
Identities = 43/130 (33%), Positives = 63/130 (48%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLW 326
G ++++DGA K + GGI+R G+WI GF A AE+ + +GL + W
Sbjct: 632 GWLKLNTDGASKGNPGLATAGGILRQQDGSWIGGFAVNIGICSAPLAELWRVYYGLYIAW 691
Query: 325 NAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAA 146
+ R EVD +V L H L+ + + RDW V +++V REAN A
Sbjct: 692 ERKITRLEVEVDSELVVGFLTTWISDSHPLSFLVRLCYGFISRDWIVRISHVYREANRLA 751
Query: 145 DCLAGLGASL 116
D LA +SL
Sbjct: 752 DGLANYASSL 761
[34][TOP]
>UniRef100_B9RR14 Putative uncharacterized protein n=1 Tax=Ricinus communis
RepID=B9RR14_RICCO
Length = 283
Score = 64.3 bits (155), Expect = 5e-09
Identities = 43/155 (27%), Positives = 73/155 (47%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLW 326
G +++++DG K G GGI+RD+ G + AE+ A+ GL L W
Sbjct: 130 GWFKLNADGCCKQVRRIAGGGGIIRDSIG---------------MGAELWAVLQGLILAW 174
Query: 325 NAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAA 146
N + EVD + + L + ++ +L +L RDW+ ++ ++ REAN A
Sbjct: 175 NNGFHKLLVEVDSAIVADWLSSKNKCNGIHSNMVLACLDILKRDWSASIGHIYREANQVA 234
Query: 145 DCLAGLGASLLCPLTCLESPPQELQPILARDLLAL 41
DCLA L S + L P E++ ++ D + +
Sbjct: 235 DCLANLALSYPVGIHELPMVPYEVKTLVNEDCIGV 269
[35][TOP]
>UniRef100_B9G5U3 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9G5U3_ORYSJ
Length = 167
Score = 63.5 bits (153), Expect = 8e-09
Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 5/157 (3%)
Frame = -2
Query: 496 RMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGD----ALRAEIAALKHGLTLL 329
++ SDGAF+ + G G +VRD HG AG+ G D A +EI A +
Sbjct: 13 KISSDGAFRSSTKQGGWGYVVRDHHGCVAQ---AGAGGADHLMDAFHSEIIACAAAIGAT 69
Query: 328 WNAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIR-LLLDRDWTVTLAYVPREANA 152
+ + E D L + AL+ + + A+ +L+I+ ++ R ++ ++ Y P+E N
Sbjct: 70 SERGIMKVEFETDSLLLKSALQENSFNLSAMGGVILEIKNVISSRFFSFSVNYCPKECNK 129
Query: 151 AADCLAGLGASLLCPLTCLESPPQELQPILARDLLAL 41
A LA LG +LL P + +PP L+ ++ DL +
Sbjct: 130 VAHELAKLGCNLLDPCSWAGTPP-GLEYLVTSDLAGM 165
[36][TOP]
>UniRef100_B9MTZ7 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9MTZ7_POPTR
Length = 128
Score = 62.8 bits (151), Expect = 1e-08
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Frame = -2
Query: 496 RMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALK-HGLTLLWNA 320
++D +G+ + R G G++ G ++ GF + G L E+ ALK HGL L W
Sbjct: 16 KLDIEGSSLGNPGRAGSEGLIHHREGLFVVGFTGFAGFGCKLLPELMALKKHGLLLAWER 75
Query: 319 HVRRATCEVDCLDIVEALEND-RYQFHALASELLDIRLLLDRDWTVTL 179
RR C+ D +D + + Y+FH + ++DIR LL RDW V L
Sbjct: 76 GYRRILCDSDSMDAIWLVTAGIDYEFHKFGALIVDIRDLLKRDWLVKL 123
[37][TOP]
>UniRef100_O80790 Putative non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=O80790_ARATH
Length = 970
Score = 62.0 bits (149), Expect = 2e-08
Identities = 41/148 (27%), Positives = 64/148 (43%)
Frame = -2
Query: 496 RMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLWNAH 317
++ +DGA + G + + G W+ GF DA AE+ +GL + W+
Sbjct: 811 KLTTDGASRGHQGLAAASGAILNLQGEWLGGFALNIGSCDAPLAELWGAYYGLLIAWDKG 870
Query: 316 VRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAADCL 137
RR +D +V L + H L+ + + RDW V +++V REAN AD L
Sbjct: 871 FRRVELNLDSELVVGFLSTGISKAHPLSFLVRLCQGFFTRDWLVRVSHVYREANRLADGL 930
Query: 136 AGLGASLLCPLTCLESPPQELQPILARD 53
A L C E P+++ L D
Sbjct: 931 ANYAFFLPLGFHCFEICPEDVLLFLVED 958
[38][TOP]
>UniRef100_B9TAI7 Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus
communis RepID=B9TAI7_RICCO
Length = 120
Score = 61.2 bits (147), Expect = 4e-08
Identities = 31/110 (28%), Positives = 56/110 (50%)
Frame = -2
Query: 457 RMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLWNAHVRRATCEVDCLDI 278
R +GG++RD +G WI GF A + AE+ + HGL L W+ +++ E L I
Sbjct: 11 RASLGGLIRDHNGDWIRGFMANLGVYSVMFAELQGIYHGLCLAWSKGIKKVVLEAYNLSI 70
Query: 277 VEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAADCLAGL 128
L + + + +IR ++ R+W + + ++ +E N A+ LA +
Sbjct: 71 KMVLNRAKDGCIQNIALVKEIRKMITREWQIQVTHINQEGNKCANLLANM 120
[39][TOP]
>UniRef100_A4PSD6 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
n=1 Tax=Medicago truncatula RepID=A4PSD6_MEDTR
Length = 869
Score = 60.8 bits (146), Expect = 5e-08
Identities = 49/156 (31%), Positives = 74/156 (47%), Gaps = 2/156 (1%)
Frame = -2
Query: 493 MDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSL--GGDALRAEIAALKHGLTLLWNA 320
++ DG+ R G GG++R++ G ++SGF G L D L AE+ A+ G+ +
Sbjct: 714 LNVDGSCIGSPIRAGFGGLIRNSVGFYLSGFL-GFLPSSSDILLAELTAIYDGINTAIDM 772
Query: 319 HVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAADC 140
+ D L + + +FH A+ + DIR L +L + RE N +AD
Sbjct: 773 GITDMAVYSDSLLSINLITTTSSKFHIHAALIQDIRDKLSLR-NFSLNHTLREGNQSADY 831
Query: 139 LAGLGASLLCPLTCLESPPQELQPILARDLLAL*FL 32
LA LGA + +SPP EL P+L D FL
Sbjct: 832 LAKLGAMSDVNVLIHQSPPDELCPLLKNDAAGTLFL 867
[40][TOP]
>UniRef100_B9H6T1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9H6T1_POPTR
Length = 329
Score = 60.5 bits (145), Expect = 7e-08
Identities = 40/124 (32%), Positives = 62/124 (50%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLW 326
G ++++DG+ D + G+GG+ RD G I GF + + G D E+ A+ GL L
Sbjct: 173 GWIKLNTDGSI--DSENAGIGGLFRDYEGNAICGFVSKASGHDIFLVELWAIWRGLVLAL 230
Query: 325 NAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAA 146
N H++ E D L +V + + + L IRLLL + +++ RE N AA
Sbjct: 231 NLHIQVLWVESDSLSVVNTINRQQPYSGKADACLKQIRLLLKKFKKHKVSHSWRETNRAA 290
Query: 145 DCLA 134
D LA
Sbjct: 291 DYLA 294
[41][TOP]
>UniRef100_Q2HVF1 Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago
truncatula RepID=Q2HVF1_MEDTR
Length = 126
Score = 60.1 bits (144), Expect = 9e-08
Identities = 34/115 (29%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Frame = -2
Query: 493 MDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLG-GDALRAEIAALKHGLTLLWNAH 317
++ DG+ ++ + GG++R G+++ G + GS+G + L AEI L G+ L W
Sbjct: 14 LNDDGSALNNSGKANYGGLIRKHDGSFLRGLF-GSVGISNILHAEIQTLI-GIKLCWETG 71
Query: 316 VRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANA 152
R+ C D + +VE + D +FH A+ L I+ LD+DW +++ ++ + N+
Sbjct: 72 YRKLMCFFDSIHVVELVMKDISRFHHYANLLELIQNYLDKDWFISIQHILWDGNS 126
[42][TOP]
>UniRef100_B9REA7 Nucleic acid binding protein, putative n=1 Tax=Ricinus communis
RepID=B9REA7_RICCO
Length = 244
Score = 60.1 bits (144), Expect = 9e-08
Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
Frame = -2
Query: 508 SGEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGF--YAGSLGGDALRAEIAALKHGLT 335
+G ++++DGA + +D GG++RD+ G WI GF Y G LG +++AE+ L GL
Sbjct: 82 TGCMKLNTDGAKRGEDGPAAAGGLIRDSRGRWIRGFKCYMG-LGSTSVKAELLGLIEGLK 140
Query: 334 LLWNAHVRRATCEVDCLDIVEAL------ENDRYQFHALASELLDIRLLLDRDWTVTLAY 173
L + E D +V+ + +ND Y LASE I+ LL + W V +
Sbjct: 141 LARKIGCEKLIVETDNEGVVQMIKIKTNRQNDNY---ILASE---IQQLLQKGWEV--QH 192
Query: 172 VPREANAAADCLAGLGASLLCPLTCLESPP--QELQPILARD 53
+ N AD LA G L PP ++L IL ++
Sbjct: 193 CKNKQNRCADRLANYGLEEPHVYQELSCPPMYRDLHDILKQE 234
[43][TOP]
>UniRef100_Q8LNW5 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=Q8LNW5_ORYSJ
Length = 243
Score = 59.7 bits (143), Expect = 1e-07
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
Frame = -2
Query: 496 RMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLG--GDALRAEIAALKHGLTLLWN 323
+++ DGAFKH G G ++RD GA + AGS DA AE+ A GL N
Sbjct: 87 KINVDGAFKHQLLLGGWGYVIRDV-GAHVIQAGAGSSSRMQDAFHAEVMAGVKGLQAAAN 145
Query: 322 AHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDW-TVTLAYVPREANAAA 146
+ E D L +++AL + +++ L LL+ + ++ + + +Y PRE N A
Sbjct: 146 LGMANIQLESDSLTLIQALREENFRYAPLGGLLLEAKNIITSSFVSCQFSYCPRECNKVA 205
Query: 145 DCLAGLGAS 119
D +A +G +
Sbjct: 206 DAIASIGCN 214
[44][TOP]
>UniRef100_B9SWE6 Nuclease, putative n=1 Tax=Ricinus communis RepID=B9SWE6_RICCO
Length = 219
Score = 59.7 bits (143), Expect = 1e-07
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 6/163 (3%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGG--DALRAEIAALKHGLTL 332
G +++++DG +K G+ R+ +G W GF A L A AE+ + +GL +
Sbjct: 52 GWFKINTDGTWKKSSGIATAAGLFRNCNGQWCGGF-AIKLRDCYSAFVAELFGILNGLNI 110
Query: 331 LWNAHVRRATCEVDCLDIVEAL--ENDRYQFHALASELL-DIRLLLDRDWTVTLAYVPRE 161
WNA R E D V+ + ++D + L L+ I+ +L ++W + L + RE
Sbjct: 111 AWNAGFRNIILETDNKTSVDKIYGDSDTKRMGDLEDLLITSIKEMLTKEWNIKLQHQYRE 170
Query: 160 ANAAADCLAGLGASLL-CPLTCLESPPQELQPILARDLLAL*F 35
N AD LA + L PP+ +L D+ + F
Sbjct: 171 GNRVADALANFAVDFSPGQIVALHYPPESTISLLMEDIWGMKF 213
[45][TOP]
>UniRef100_B8BHJ1 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8BHJ1_ORYSI
Length = 243
Score = 59.7 bits (143), Expect = 1e-07
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
Frame = -2
Query: 496 RMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLG--GDALRAEIAALKHGLTLLWN 323
+++ DGAFKH G G ++RD GA + AGS DA AE+ A GL N
Sbjct: 87 KINVDGAFKHQLLLGGWGYVIRDV-GAHVIQAGAGSSSRMQDAFHAEVMAGVKGLQAAAN 145
Query: 322 AHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDW-TVTLAYVPREANAAA 146
+ E D L +++AL + +++ L LL+ + ++ + + +Y PRE N A
Sbjct: 146 LGMANIQLESDSLTLIQALREENFRYAPLGGLLLEAKNIITSSFVSCQFSYCPRECNKVA 205
Query: 145 DCLAGLGAS 119
D +A +G +
Sbjct: 206 DAIASIGCN 214
[46][TOP]
>UniRef100_C5Y787 Putative uncharacterized protein Sb05g006430 n=1 Tax=Sorghum
bicolor RepID=C5Y787_SORBI
Length = 375
Score = 59.3 bits (142), Expect = 1e-07
Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 4/159 (2%)
Frame = -2
Query: 508 SGEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWI-SGFYAGSLGGDALRAEIAALKHGLTL 332
SG ++++DGAF+ D G G ++RD GA I +G G++L E+ A G
Sbjct: 215 SGLLKVNADGAFRDVDKTGGWGYVIRDEEGAVIQTGLGRIMYAGNSLHTELMACLEGAKA 274
Query: 331 LWNAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLL-DRDWTVTLAYVPREAN 155
+ E D +V A++ D ++ + + +++LLL + +V +++VPR+ N
Sbjct: 275 ALSLGASHFILETDAQHVVWAMQGDDFRLAMVGGIVHELKLLLAESSISVRISHVPRDCN 334
Query: 154 AAADCLAGLGASLLCPLTCLESPPQELQ--PILARDLLA 44
A LA LG S +S P L P+ RDL++
Sbjct: 335 KVAHELASLGKSR------SDSAPLVLAGVPLCIRDLVS 367
[47][TOP]
>UniRef100_Q9FNQ6 Gb|AAF19536.1 n=1 Tax=Arabidopsis thaliana RepID=Q9FNQ6_ARATH
Length = 657
Score = 58.2 bits (139), Expect = 3e-07
Identities = 39/151 (25%), Positives = 65/151 (43%)
Frame = -2
Query: 496 RMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLWNAH 317
+++ G D GIVRD G W+ G+ + A + A+ GL LW++
Sbjct: 505 KLNIQGTSNPLSDLTRSAGIVRDQSGKWVFGYIRCHKSIPEVVAGLLAIYQGLKYLWDSG 564
Query: 316 VRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAADCL 137
RR E +I+ AL F + L + ++ ++W + ++ +E N+ A+ L
Sbjct: 565 FRRIHLETTSFEIINALTTKSSLFCKSKTLLGACKDMILKEWECDIYHISKEQNSCAEWL 624
Query: 136 AGLGASLLCPLTCLESPPQELQPILARDLLA 44
A L E PP+ L L +D LA
Sbjct: 625 AKRSEEQPQELVFFEYPPRGLMDFLEKDRLA 655
[48][TOP]
>UniRef100_O23409 Splicing factor like protein n=1 Tax=Arabidopsis thaliana
RepID=O23409_ARATH
Length = 559
Score = 58.2 bits (139), Expect = 3e-07
Identities = 41/130 (31%), Positives = 61/130 (46%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLW 326
G ++ +DGA + + GG++RD G W+ GF AL+ L+ W
Sbjct: 34 GWVKVSTDGASRGNPGPAAAGGVIRDEDGLWVGGF--------ALQLAFVRLR------W 79
Query: 325 NAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAA 146
+ R EVD +V L++ + H LA + LL +DW V +++V REAN A
Sbjct: 80 QSCGGRVELEVDSELVVGFLQSGISEAHPLAFLVRLCHGLLSKDWLVRVSHVYREANRLA 139
Query: 145 DCLAGLGASL 116
D LA SL
Sbjct: 140 DGLANYAFSL 149
[49][TOP]
>UniRef100_C5XJ51 Putative uncharacterized protein Sb03g033860 n=1 Tax=Sorghum
bicolor RepID=C5XJ51_SORBI
Length = 397
Score = 58.2 bits (139), Expect = 3e-07
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 4/159 (2%)
Frame = -2
Query: 508 SGEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWI-SGFYAGSLGGDALRAEIAALKHGLTL 332
SG +++ DGAF+ D G G ++RD GA I +G G+ L+ E+ A G
Sbjct: 237 SGMLKVNVDGAFRDVDKTGGWGYVIRDEEGAVIQTGLGRIMYAGNPLQTELMACLEGAKA 296
Query: 331 LWNAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLL-DRDWTVTLAYVPREAN 155
+ E D +V A++ D ++ + + +++LLL + +V +++VPR+ N
Sbjct: 297 ALSLGASHFILETDAQHVVWAMQGDDFRLAMVGGFVHELKLLLAESSISVRISHVPRDCN 356
Query: 154 AAADCLAGLGASLLCPLTCLESPPQELQ--PILARDLLA 44
A LA LG S +S P L P+ RDL++
Sbjct: 357 KVAHELASLGRSR------SDSAPLVLAGGPLCIRDLVS 389
[50][TOP]
>UniRef100_Q2HUN6 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
n=1 Tax=Medicago truncatula RepID=Q2HUN6_MEDTR
Length = 1296
Score = 56.2 bits (134), Expect = 1e-06
Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 2/155 (1%)
Frame = -2
Query: 493 MDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAG--SLGGDALRAEIAALKHGLTLLWNA 320
++ DG+ R G GGI R+ G ++SG Y+G S D L AE+ AL GL +
Sbjct: 1141 LNVDGSCLGTPIRAGFGGIFRNNVGGYLSG-YSGFISESTDILLAELTALHQGLIMAAEM 1199
Query: 319 HVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAADC 140
+ C D L + + ++H A + DI+ LL ++ + RE N AD
Sbjct: 1200 GIEELACYSDSLLTINLITRTTSKYHTYAVLIQDIKDLLSAH-NFSVYHCFREGNQCADY 1258
Query: 139 LAGLGASLLCPLTCLESPPQELQPILARDLLAL*F 35
LA LGAS S QEL ++ D + F
Sbjct: 1259 LAKLGASSNEECLVHASACQELLVLIQMDAIGTLF 1293
[51][TOP]
>UniRef100_B9SFD3 Nuclease, putative n=1 Tax=Ricinus communis RepID=B9SFD3_RICCO
Length = 201
Score = 56.2 bits (134), Expect = 1e-06
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 2/153 (1%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLG-GDALRAEIAALKHGLTLL 329
G +++ DG+ K + + +GG+ R+ ++ G YA S+G + AE+AAL+ GL L+
Sbjct: 40 GWTKLNFDGSCKGREGKGSIGGVFRNHKAEFLLG-YAESIGRSTSTIAELAALRRGLELV 98
Query: 328 WNAHVRRATCEVDCLDIVEALENDR-YQFHALASELLDIRLLLDRDWTVTLAYVPREANA 152
E D ++E + R + + + DI L++ +++V RE N
Sbjct: 99 LENGWSNVWLEGDAKTLLEIIVKRRKVRCAQMQRHVSDINLIIPELDNCIVSHVYREGNR 158
Query: 151 AADCLAGLGASLLCPLTCLESPPQELQPILARD 53
AAD LA +G L P PP ++ PI+ D
Sbjct: 159 AADKLAQIGHQLQKPKIWWHIPPDDVLPIVHED 191
[52][TOP]
>UniRef100_B9SAL2 Nucleic acid binding protein, putative n=1 Tax=Ricinus communis
RepID=B9SAL2_RICCO
Length = 209
Score = 56.2 bits (134), Expect = 1e-06
Identities = 32/122 (26%), Positives = 57/122 (46%)
Frame = -2
Query: 499 YRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLWNA 320
++++++G+ + G++ D G W+ GF+ E+ L GL L W
Sbjct: 50 FKLNTNGSVQKARGVATSRGVIHDDIGNWLRGFFMKMSFCIVTATELWGLYQGLELAWKI 109
Query: 319 HVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAADC 140
+RR EVD +V+ + R L + I LL R+W V + +V +++ A+C
Sbjct: 110 GIRRIQVEVDNKRVVKLIYGHRVHASCLILLIASIHHLLSRNWQVNIGHVYCKSSKVANC 169
Query: 139 LA 134
LA
Sbjct: 170 LA 171
[53][TOP]
>UniRef100_Q6K204 Putative uncharacterized protein B1469H02.35 n=1 Tax=Oryza sativa
Japonica Group RepID=Q6K204_ORYSJ
Length = 212
Score = 55.8 bits (133), Expect = 2e-06
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
Frame = -2
Query: 508 SGEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLG-GDALRAEIAALKHGLTL 332
+G +++ DG+ KH +GG+ RD GA++ G YA +G + AE+AAL+ GL L
Sbjct: 56 AGWIKLNFDGSSKHATKIASIGGVYRDHEGAFVLG-YAERIGRATSSVAELAALRRGLEL 114
Query: 331 LWNAHVRRATCEVDCLDIVEAL-ENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREAN 155
+ RR E D +V+ + + + + +I LL + +++V R N
Sbjct: 115 VVRNGWRRVWAEGDSKTVVDVVCDRANVRSEEDLRQCREIAALLPLIDDMAVSHVYRSGN 174
Query: 154 AAADCLAGLGASLLCPLTCLESPPQELQPILARD 53
A A LG + P +PP+E+ L +D
Sbjct: 175 KVAHGFARLGHKAVRPRVWRAAPPEEVLRFLQQD 208
[54][TOP]
>UniRef100_C5XMG5 Putative uncharacterized protein Sb03g037190 n=1 Tax=Sorghum
bicolor RepID=C5XMG5_SORBI
Length = 589
Score = 55.8 bits (133), Expect = 2e-06
Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 2/153 (1%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAW--ISGFYAGSLGGDALRAEIAALKHGLTL 332
G +++SDGAF D G +VRD+ G + S + G + G L AE A++ GL L
Sbjct: 434 GMLKINSDGAFLQDRGTGAAGAVVRDSSGNFCAASARWLGPV-GSVLIAEAEAIRDGLRL 492
Query: 331 LWNAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANA 152
+ + E D ++V +N Q +A+ L +I ++ + L +V REAN+
Sbjct: 493 IPQGTMEHIIGETDAREVVALWKNRTRQRSEIAAILKEIEEIVSAFTSFELIHVRREANS 552
Query: 151 AADCLAGLGASLLCPLTCLESPPQELQPILARD 53
A A +S L SPP LQ L D
Sbjct: 553 VAHTCARFASSSLDSHVWF-SPPSFLQRCLQSD 584
[55][TOP]
>UniRef100_B9SG51 Putative uncharacterized protein n=1 Tax=Ricinus communis
RepID=B9SG51_RICCO
Length = 132
Score = 55.8 bits (133), Expect = 2e-06
Identities = 33/96 (34%), Positives = 50/96 (52%)
Frame = -2
Query: 421 GAWISGFYAGSLGGDALRAEIAALKHGLTLLWNAHVRRATCEVDCLDIVEALENDRYQFH 242
G WI GF A + L HGLTL W +R+ +VD + V + ++
Sbjct: 4 GMWIHGFVVNIGRCSITGAGLWGLYHGLTLAWKLGIRKLLVKVDSMCAVPLVTGEKDISS 63
Query: 241 ALASELLDIRLLLDRDWTVTLAYVPREANAAADCLA 134
+ A + IR +L ++W V++++V REAN AAD LA
Sbjct: 64 SYAPLVSGIRSMLGQNWQVSVSHVYREANFAADGLA 99
[56][TOP]
>UniRef100_B9F175 Putative uncharacterized protein n=2 Tax=Oryza sativa
RepID=B9F175_ORYSJ
Length = 204
Score = 55.8 bits (133), Expect = 2e-06
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
Frame = -2
Query: 508 SGEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLG-GDALRAEIAALKHGLTL 332
+G +++ DG+ KH +GG+ RD GA++ G YA +G + AE+AAL+ GL L
Sbjct: 48 AGWIKLNFDGSSKHATKIASIGGVYRDHEGAFVLG-YAERIGRATSSVAELAALRRGLEL 106
Query: 331 LWNAHVRRATCEVDCLDIVEAL-ENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREAN 155
+ RR E D +V+ + + + + +I LL + +++V R N
Sbjct: 107 VVRNGWRRVWAEGDSKTVVDVVCDRANVRSEEDLRQCREIAALLPLIDDMAVSHVYRSGN 166
Query: 154 AAADCLAGLGASLLCPLTCLESPPQELQPILARD 53
A A LG + P +PP+E+ L +D
Sbjct: 167 KVAHGFARLGHKAVRPRVWRAAPPEEVLRFLQQD 200
[57][TOP]
>UniRef100_B2BXJ9 Putative uncharacterized protein n=1 Tax=Arabidopsis lyrata subsp.
lyrata RepID=B2BXJ9_ARALY
Length = 172
Score = 55.8 bits (133), Expect = 2e-06
Identities = 44/153 (28%), Positives = 66/153 (43%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLW 326
G +M++DGA + + G++R++ G W GF A AE+ + +GL W
Sbjct: 10 GWSKMNTDGASQGNPGLATASGVLRNSDGKWCGGFALNIGRCSAPLAELWGVYYGLYTAW 69
Query: 325 NAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREANAAA 146
V R EVD +V L H L+ + + RDW V + +V R+AN A
Sbjct: 70 EHRVTRLVLEVDSSLVVGFLTTGIGDSHPLSILVRLCYGFIARDWIVRVTHVYRKANRFA 129
Query: 145 DCLAGLGASLLCPLTCLESPPQELQPILARDLL 47
D LA SL S P + L D++
Sbjct: 130 DGLANYVFSLPLGFHDFVSVPVVVDSFLRDDVV 162
[58][TOP]
>UniRef100_A2Q4M4 Ribonuclease H n=1 Tax=Medicago truncatula RepID=A2Q4M4_MEDTR
Length = 147
Score = 55.5 bits (132), Expect = 2e-06
Identities = 38/119 (31%), Positives = 60/119 (50%)
Frame = -2
Query: 367 AEIAALKHGLTLLWNAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWT 188
AEI A+ GL L N C D ++ L ++H AS + +I L++ +W
Sbjct: 22 AEIIAIYQGLHLARNFGCTYIICYSDSKGGIDILAKPVKKYHCYASAIANIIDLMNLEWE 81
Query: 187 VTLAYVPREANAAADCLAGLGASLLCPLTCLESPPQELQPILARDLLAL*FLFLACLIF 11
V L + RE NA+AD LA G+S +PP++L+ IL D + F+F + ++F
Sbjct: 82 VKLCHSLREGNASADFLAKWGSSNDIKWKLRNTPPEDLKAILLNDSMRT-FVFNSFVVF 139
[59][TOP]
>UniRef100_UPI00019860A8 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI00019860A8
Length = 205
Score = 54.7 bits (130), Expect = 4e-06
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 2/150 (1%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLG-GDALRAEIAALKHGLTLL 329
G +++ DG+ K R +GG++RD + A++ G YA S+G ++ AE+AAL+ GL L+
Sbjct: 44 GWTKLNFDGSCKCSSGRASIGGVIRDHNAAFLLG-YAESIGHANSTIAEMAALRRGLELV 102
Query: 328 WNAHVRRATCEVDCLDIVEALENDRYQFHALA-SELLDIRLLLDRDWTVTLAYVPREANA 152
+ E D +VE + R A A ++ I+LL+ + ++ RE N
Sbjct: 103 VENGWSQVWLEGDLQSLVEIIMQGRRVRSAEAQKQVSHIKLLIPELDNFLITHIYREGNR 162
Query: 151 AADCLAGLGASLLCPLTCLESPPQELQPIL 62
A A +G L P P + L+ IL
Sbjct: 163 VAHTFAQMGHRLKHPQIWRHIPNEVLRNIL 192
[60][TOP]
>UniRef100_Q2QT44 Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa
Japonica Group RepID=Q2QT44_ORYSJ
Length = 839
Score = 54.7 bits (130), Expect = 4e-06
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWI-SGFYAGSLGGDALRAEIAALKHGLTLL 329
G +++SDGAF ++ + G G I+RD G I +G + DA AE+ A G+
Sbjct: 669 GVMKINSDGAFDPNNRKGGWGFIIRDHLGMVIKAGAGRTHVLLDAFHAEVLACAAGIKAA 728
Query: 328 WNAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDW-TVTLAYVPREANA 152
++R E D L + A+E++ Y AL + +++ ++ ++ + ++ Y PR N
Sbjct: 729 NECGLQRVEAETDSLMLKMAMEDNSYALSALGGIICEMKNFVNTNFRSFSVKYCPRGCNK 788
Query: 151 AADCLAGLGAS 119
A LA LG +
Sbjct: 789 VAHALAALGCN 799
[61][TOP]
>UniRef100_B9GCT3 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9GCT3_ORYSJ
Length = 502
Score = 54.7 bits (130), Expect = 4e-06
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWI-SGFYAGSLGGDALRAEIAALKHGLTLL 329
G +++SDGAF ++ + G G I+RD G I +G + DA AE+ A G+
Sbjct: 332 GVMKINSDGAFDPNNRKGGWGFIIRDHLGMVIKAGAGRTHVLLDAFHAEVLACAAGIKAA 391
Query: 328 WNAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDW-TVTLAYVPREANA 152
++R E D L + A+E++ Y AL + +++ ++ ++ + ++ Y PR N
Sbjct: 392 NECGLQRVEAETDSLMLKMAMEDNSYALSALGGIICEMKNFVNTNFRSFSVKYCPRGCNK 451
Query: 151 AADCLAGLGAS 119
A LA LG +
Sbjct: 452 VAHALAALGCN 462
[62][TOP]
>UniRef100_A7R2T4 Chromosome undetermined scaffold_448, whole genome shotgun sequence
n=1 Tax=Vitis vinifera RepID=A7R2T4_VITVI
Length = 2141
Score = 54.7 bits (130), Expect = 4e-06
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 2/150 (1%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLG-GDALRAEIAALKHGLTLL 329
G +++ DG+ K R +GG++RD + A++ G YA S+G ++ AE+AAL+ GL L+
Sbjct: 44 GWTKLNFDGSCKCSSGRASIGGVIRDHNAAFLLG-YAESIGHANSTIAEMAALRRGLELV 102
Query: 328 WNAHVRRATCEVDCLDIVEALENDRYQFHALA-SELLDIRLLLDRDWTVTLAYVPREANA 152
+ E D +VE + R A A ++ I+LL+ + ++ RE N
Sbjct: 103 VENGWSQVWLEGDLQSLVEIIMQGRRVRSAEAQKQVSHIKLLIPELDNFLITHIYREGNR 162
Query: 151 AADCLAGLGASLLCPLTCLESPPQELQPIL 62
A A +G L P P + L+ IL
Sbjct: 163 VAHTFAQMGHRLKHPQIWRHIPNEVLRNIL 192
[63][TOP]
>UniRef100_UPI0000162802 nucleic acid binding / ribonuclease H n=1 Tax=Arabidopsis thaliana
RepID=UPI0000162802
Length = 258
Score = 54.3 bits (129), Expect = 5e-06
Identities = 33/109 (30%), Positives = 49/109 (44%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLGGDALRAEIAALKHGLTLLW 326
G ++++DGA + + GG++RD GAW GF A AE+ + +GL W
Sbjct: 146 GWVKVNTDGASRGNPGLASAGGVLRDCEGAWCGGFSLNIGRCSAQHAELWGVYYGLYFAW 205
Query: 325 NAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTL 179
V R EVD IV L+ H L+ + L +DW + L
Sbjct: 206 EKKVPRVELEVDSEAIVGFLKTGISDSHPLSFLVRLCHNFLQKDWRILL 254
[64][TOP]
>UniRef100_A5B4E3 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5B4E3_VITVI
Length = 697
Score = 54.3 bits (129), Expect = 5e-06
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 2/150 (1%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLG-GDALRAEIAALKHGLTLL 329
G +++ DG+ K R +GG++RD + A++ G YA S+G + AE+AAL+ GL L+
Sbjct: 479 GWTKLNFDGSCKCSSGRASIGGVIRDHNAAFLLG-YAESIGHAXSTIAEMAALRRGLELV 537
Query: 328 WNAHVRRATCEVDCLDIVEALENDRYQFHALA-SELLDIRLLLDRDWTVTLAYVPREANA 152
+ E D +VE + R A A ++ I+LL+ + ++ RE N
Sbjct: 538 VENGWSQVWLEGDLQSLVEIIMQGRRVRSAEAQKQVSHIKLLIPELDNFLITHIYREGNR 597
Query: 151 AADCLAGLGASLLCPLTCLESPPQELQPIL 62
A A +G L P P + L+ IL
Sbjct: 598 VAHTFAQMGHRLKHPQIWRHIPNEXLRBIL 627
[65][TOP]
>UniRef100_A2YJD5 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2YJD5_ORYSI
Length = 858
Score = 54.3 bits (129), Expect = 5e-06
Identities = 36/132 (27%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Frame = -2
Query: 508 SGEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGSLG--GDALRAEIAALKHGLT 335
+G +++ DG+F+ D G+G I+R++ G + GS+ G AL AE+ A + GLT
Sbjct: 706 TGWMKLNVDGSFQEHDGSGGIGAILRNSAGEVVFAS-CGSMNRCGGALEAELLACRDGLT 764
Query: 334 LLWNAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVTLAYVPREAN 155
L+ + E DCL ++ +++ + LA + +I+ L+ + + + + R N
Sbjct: 765 LVLQWTLLPIVIESDCLQAIQLIQSKEEERSDLAFLIREIKHLMAGNRDIVIMKIHRNQN 824
Query: 154 AAADCLAGLGAS 119
+ + LA G S
Sbjct: 825 SVSHALAYKGCS 836
[66][TOP]
>UniRef100_B9RHM1 Nucleic acid binding protein, putative n=1 Tax=Ricinus communis
RepID=B9RHM1_RICCO
Length = 119
Score = 53.9 bits (128), Expect = 6e-06
Identities = 32/106 (30%), Positives = 57/106 (53%)
Frame = -2
Query: 367 AEIAALKHGLTLLWNAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWT 188
AE++ + GL L W+ V + E+D L +V+ L+ + + + +IR L+R+W
Sbjct: 11 AELSGVHKGLALAWHYGVLKLKVEIDSLYVVQLLKGIKVVCNYNGLLISNIRQYLNREWE 70
Query: 187 VTLAYVPREANAAADCLAGLGASLLCPLTCLESPPQELQPILARDL 50
V++ ++ RE+N AAD LA L A+ L + +L +L D+
Sbjct: 71 VSIVHIYRESNFAADALAFLAANFPLGYHELGAASNDLLDMLYHDI 116
[67][TOP]
>UniRef100_A2YY55 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2YY55_ORYSI
Length = 632
Score = 53.9 bits (128), Expect = 6e-06
Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Frame = -2
Query: 505 GEYRMDSDGAFKHDDDRMGMGGIVRDAHGAWISGFYAGS----LGGDALRAEIAALKHGL 338
G +++ DGA++ G ++R +G G AGS + DAL AE A L
Sbjct: 471 GILKINFDGAYREMSRDGAWGFVIRGENGR---GVLAGSGRLPMVSDALMAEAEACLAAL 527
Query: 337 TLLWNAHVRRATCEVDCLDIVEALENDRYQFHALASELLDIRLLLDRDWTVT-LAYVPRE 161
+ + R E DCL++V AL+ D + + ++RL+L + VT + +V R
Sbjct: 528 EAAIDHGISRVIIESDCLNLVSALKTDEFDRSSGGIVFRELRLILSMYFVVTDIRHVHRS 587
Query: 160 ANAAADCLAGLGASLLCPLTCLESPPQE 77
NA AD LA + CL+ P++
Sbjct: 588 CNACADALAHM---------CLDRDPEQ 606