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[1][TOP]
>UniRef100_B9IEP4 Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa
RepID=B9IEP4_POPTR
Length = 1110
Score = 211 bits (537), Expect = 2e-53
Identities = 96/145 (66%), Positives = 121/145 (83%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
WS+K+AE YD +LE GFE FL AS +KE Y EKM+ LM +YGA+TEDE+LTGNL++R
Sbjct: 964 WSKKIAEATYDQDLEVKGFEDFLGIASIYKEKYMEKMSTLMDYYGAKTEDEILTGNLRHR 1023
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYH 133
+YLQRDNR+Y D+KDRIL+S+K+L++EAKEWFE+ C E+Q MASAWYHVTYHP Y+H
Sbjct: 1024 PTYLQRDNRKYGDVKDRILVSLKNLKKEAKEWFESSCNPTEHQCMASAWYHVTYHPTYFH 1083
Query: 132 ESSSFLSFPWIVGDILLHIKSVNSK 58
E + LSFPWIVGDILL+IKS+NS+
Sbjct: 1084 ERMNCLSFPWIVGDILLNIKSLNSR 1108
[2][TOP]
>UniRef100_B9RB56 RNA-dependent RNA polymerase, putative n=1 Tax=Ricinus communis
RepID=B9RB56_RICCO
Length = 983
Score = 209 bits (532), Expect = 8e-53
Identities = 99/147 (67%), Positives = 116/147 (78%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
W+E +AE YD +LE GFE F+E A SHK+MY EK++ LM +Y A+ EDE+LTGNLQN+
Sbjct: 819 WTENIAEATYDHDLEVKGFEEFVEIAISHKDMYVEKLSGLMDYYEAKKEDEILTGNLQNK 878
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYH 133
A YLQRDNRRY D KDRILISVK LQ+EAKEWFE+ CQ E Q +ASAWYHVTYHP Y+
Sbjct: 879 AMYLQRDNRRYGDTKDRILISVKSLQKEAKEWFESCCQAKEKQRLASAWYHVTYHPSYFQ 938
Query: 132 ESSSFLSFPWIVGDILLHIKSVNSKVL 52
E + LSFPWIV DILL+IKS NSK L
Sbjct: 939 EGITCLSFPWIVADILLNIKSANSKNL 965
[3][TOP]
>UniRef100_A7PD40 Chromosome chr17 scaffold_12, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PD40_VITVI
Length = 1127
Score = 205 bits (522), Expect = 1e-51
Identities = 95/145 (65%), Positives = 115/145 (79%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
WS + AYD +LE +GFE FLE A HKEMYAEKM LM FYGAE+EDE+LTGNL+N+
Sbjct: 969 WSGTIPGAAYDHDLEVDGFETFLEIAKLHKEMYAEKMATLMNFYGAESEDEMLTGNLRNK 1028
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYH 133
YLQRDNRR+T+MKDRILISVK LQ+EAKEW C+ H++Q MASAWYHVTYH +
Sbjct: 1029 LMYLQRDNRRFTEMKDRILISVKSLQKEAKEWLYGSCKPHQHQKMASAWYHVTYHSTFSS 1088
Query: 132 ESSSFLSFPWIVGDILLHIKSVNSK 58
++ +FLSFPWIVG++LL IKS NS+
Sbjct: 1089 QTPNFLSFPWIVGEVLLVIKSANSR 1113
[4][TOP]
>UniRef100_Q647I4 Putative RNA-dependent RNA polymerase RdRP2 n=1 Tax=Nicotiana
benthamiana RepID=Q647I4_NICBE
Length = 1120
Score = 177 bits (450), Expect = 3e-43
Identities = 80/147 (54%), Positives = 111/147 (75%)
Frame = -1
Query: 489 SEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRA 310
S + +DAYD L +G+EAF+ETA +HKE Y ++M +L+ +YGAE E E+LTGNL+ ++
Sbjct: 973 SVRAIQDAYDHALLFDGYEAFIETAKNHKETYLDRMNSLLNYYGAEKEVEILTGNLRQKS 1032
Query: 309 SYLQRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYHE 130
YLQRDNRRY ++KDRIL+S K LQ+E K WF C++ E++ +ASAWYHVTYHP Y
Sbjct: 1033 VYLQRDNRRYFELKDRILVSAKSLQKEVKGWFTGCCKEDEHKKLASAWYHVTYHPSYCEG 1092
Query: 129 SSSFLSFPWIVGDILLHIKSVNSKVLS 49
S++ L FPW+VGDILL IK N++ ++
Sbjct: 1093 SANCLGFPWVVGDILLDIKLHNTRKIT 1119
[5][TOP]
>UniRef100_O82504 F2P3.11 protein n=1 Tax=Arabidopsis thaliana RepID=O82504_ARATH
Length = 1133
Score = 172 bits (435), Expect = 1e-41
Identities = 79/138 (57%), Positives = 107/138 (77%), Gaps = 1/138 (0%)
Frame = -1
Query: 468 AYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDN 289
AYD+ LE GFE+F+ETA +H++MY EK+T+LM +YGA E+E+LTG L+ + YL RDN
Sbjct: 982 AYDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYGAANEEEILTGILKTKEMYLARDN 1041
Query: 288 RRYTDMKDRILISVKDLQREAKEWFEADCQ-QHEYQAMASAWYHVTYHPKYYHESSSFLS 112
RRY DMKDRI +SVKDL +EA WFE C+ + + + +ASAWY+VTY+P + E +FLS
Sbjct: 1042 RRYGDMKDRITLSVKDLHKEAMGWFEKSCEDEQQKKKLASAWYYVTYNPNHRDEKLTFLS 1101
Query: 111 FPWIVGDILLHIKSVNSK 58
FPWIVGD+LL IK+ N++
Sbjct: 1102 FPWIVGDVLLDIKAENAQ 1119
[6][TOP]
>UniRef100_Q19VG2 RNA-dependent RNA polymerase n=1 Tax=Zea mays RepID=Q19VG2_MAIZE
Length = 1127
Score = 138 bits (348), Expect = 2e-31
Identities = 68/132 (51%), Positives = 90/132 (68%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
YD +LE GF+ FL+ A E YAE++ ALM +Y AE EDE+LTGN++N+ YL+RDN+
Sbjct: 978 YDPDLEVAGFDEFLDAAEERYEAYAERLGALMTYYSAEREDEILTGNIRNKLVYLRRDNK 1037
Query: 285 RYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYHESSSFLSFP 106
RY +MKDRI+ +V L E + W A C++ + +ASAWYHVTYHP E F SFP
Sbjct: 1038 RYFEMKDRIIAAVDALHAEVRGWLRA-CKEDDASRVASAWYHVTYHPDRRGE-KRFWSFP 1095
Query: 105 WIVGDILLHIKS 70
WI+ D LL IK+
Sbjct: 1096 WIICDTLLAIKA 1107
[7][TOP]
>UniRef100_C4JBQ0 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C4JBQ0_MAIZE
Length = 525
Score = 138 bits (348), Expect = 2e-31
Identities = 68/132 (51%), Positives = 90/132 (68%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
YD +LE GF+ FL+ A E YAE++ ALM +Y AE EDE+LTGN++N+ YL+RDN+
Sbjct: 376 YDPDLEVAGFDEFLDAAEERYEAYAERLGALMTYYSAEREDEILTGNIRNKLVYLRRDNK 435
Query: 285 RYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYHESSSFLSFP 106
RY +MKDRI+ +V L E + W A C++ + +ASAWYHVTYHP E F SFP
Sbjct: 436 RYFEMKDRIIAAVDALHAEVRGWLRA-CKEDDASRVASAWYHVTYHPDRRGE-KRFWSFP 493
Query: 105 WIVGDILLHIKS 70
WI+ D LL IK+
Sbjct: 494 WIICDTLLAIKA 505
[8][TOP]
>UniRef100_B9FFL3 Putative uncharacterized protein n=2 Tax=Oryza sativa Japonica
Group RepID=B9FFL3_ORYSJ
Length = 335
Score = 135 bits (339), Expect = 2e-30
Identities = 66/132 (50%), Positives = 88/132 (66%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
YD +LE G + FL+ A + E+Y EK+T LM +Y AE EDE+LTGN++N+ YL+RDN+
Sbjct: 181 YDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMNYYRAELEDEILTGNIRNKMLYLKRDNK 240
Query: 285 RYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYHESSSFLSFP 106
RY +MKDRI+ +V L REA+ W + ++ + MASAWY VTYHP F SFP
Sbjct: 241 RYFEMKDRIVAAVDALHREARGWLLSSRKEEDASRMASAWYRVTYHPD-RRRGKRFWSFP 299
Query: 105 WIVGDILLHIKS 70
WI D LL IK+
Sbjct: 300 WIACDNLLAIKA 311
[9][TOP]
>UniRef100_C5YA80 Putative uncharacterized protein Sb06g019330 n=1 Tax=Sorghum bicolor
RepID=C5YA80_SORBI
Length = 1128
Score = 135 bits (339), Expect = 2e-30
Identities = 67/132 (50%), Positives = 89/132 (67%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
YD +LE GF+ FL+TA E+YAEK+ LM +Y AE EDE+LTGN++N+ YL+RDN+
Sbjct: 979 YDPDLEVAGFDKFLDTAEEQYEVYAEKLGTLMTYYSAEHEDEILTGNIRNKLVYLRRDNK 1038
Query: 285 RYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYHESSSFLSFP 106
RY +MKDRI+ +V L E + W A ++ + +ASAWYHVTYHP E F SFP
Sbjct: 1039 RYFEMKDRIIAAVDALHAEVRGWLRAR-KEDDASKLASAWYHVTYHPDRRGE-KRFWSFP 1096
Query: 105 WIVGDILLHIKS 70
W+ D LL IK+
Sbjct: 1097 WVACDTLLAIKA 1108
[10][TOP]
>UniRef100_Q7XM31 Probable RNA-dependent RNA polymerase 2 n=1 Tax=Oryza sativa Japonica
Group RepID=RDR2_ORYSJ
Length = 1136
Score = 135 bits (339), Expect = 2e-30
Identities = 66/132 (50%), Positives = 88/132 (66%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
YD +LE G + FL+ A + E+Y EK+T LM +Y AE EDE+LTGN++N+ YL+RDN+
Sbjct: 982 YDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMNYYRAELEDEILTGNIRNKMLYLKRDNK 1041
Query: 285 RYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYHESSSFLSFP 106
RY +MKDRI+ +V L REA+ W + ++ + MASAWY VTYHP F SFP
Sbjct: 1042 RYFEMKDRIVAAVDALHREARGWLLSSRKEEDASRMASAWYRVTYHPD-RRRGKRFWSFP 1100
Query: 105 WIVGDILLHIKS 70
WI D LL IK+
Sbjct: 1101 WIACDNLLAIKA 1112
[11][TOP]
>UniRef100_A2XUF4 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2XUF4_ORYSI
Length = 1136
Score = 134 bits (338), Expect = 2e-30
Identities = 66/132 (50%), Positives = 88/132 (66%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
YD +LE G + FL+ A + E+Y EK+T LM +Y AE EDE+LTGN++N+ YL+RDN+
Sbjct: 982 YDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMNYYRAEHEDEILTGNIRNKMLYLKRDNK 1041
Query: 285 RYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYHESSSFLSFP 106
RY +MKDRI+ +V L REA+ W + ++ + MASAWY VTYHP F SFP
Sbjct: 1042 RYFEMKDRIVAAVDALHREARGWLLSSRKEEDASRMASAWYRVTYHPD-RRRGKRFWSFP 1100
Query: 105 WIVGDILLHIKS 70
WI D LL IK+
Sbjct: 1101 WIACDNLLAIKA 1112
[12][TOP]
>UniRef100_A7P3W5 Chromosome chr1 scaffold_5, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7P3W5_VITVI
Length = 1121
Score = 100 bits (250), Expect = 4e-20
Identities = 57/151 (37%), Positives = 84/151 (55%), Gaps = 11/151 (7%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
++ +A +YD ++E GFE ++ A +K Y K+ LM +YG +TE E+L+G++
Sbjct: 951 FTRDVARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGIKTESEILSGSIMRM 1010
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWF-----EADCQQHEYQAMASAWYHVTYH 148
+ R + I ++VK L++EA+ WF E D + + A ASAWYHVTYH
Sbjct: 1011 SKSFDRRKD-----AEAIGLAVKSLRKEARTWFNKMGSETDSEADDVYAKASAWYHVTYH 1065
Query: 147 PKY---YHES---SSFLSFPWIVGDILLHIK 73
P Y Y+E FLSFPW V D L+H K
Sbjct: 1066 PDYWGCYNEGMDRDHFLSFPWCVYDKLIHTK 1096
[13][TOP]
>UniRef100_A5AM83 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5AM83_VITVI
Length = 654
Score = 100 bits (250), Expect = 4e-20
Identities = 57/151 (37%), Positives = 84/151 (55%), Gaps = 11/151 (7%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
++ +A +YD ++E GFE ++ A +K Y K+ LM +YG +TE E+L+G++
Sbjct: 484 FTRDVARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGIKTESEILSGSIMRM 543
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWF-----EADCQQHEYQAMASAWYHVTYH 148
+ R + I ++VK L++EA+ WF E D + + A ASAWYHVTYH
Sbjct: 544 SKSFDRRKD-----AEAIGLAVKSLRKEARTWFNKMGSETDSEADDVYAKASAWYHVTYH 598
Query: 147 PKY---YHES---SSFLSFPWIVGDILLHIK 73
P Y Y+E FLSFPW V D L+H K
Sbjct: 599 PDYWGCYNEGMDRDHFLSFPWCVYDKLIHTK 629
[14][TOP]
>UniRef100_B9HJH7 Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa
RepID=B9HJH7_POPTR
Length = 1133
Score = 99.8 bits (247), Expect = 9e-20
Identities = 59/157 (37%), Positives = 90/157 (57%), Gaps = 13/157 (8%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
++ +A YD ++E +GFE +++ A +K Y K+ LM++YG +TE ELL+G+
Sbjct: 961 FTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYYGIKTEAELLSGS---- 1016
Query: 312 ASYLQRDNRRYTDMKD--RILISVKDLQREAKEWFE-----ADCQQHEYQAMASAWYHVT 154
+ ++ +T +D I ++V+ L++EA+ WF D Q + A ASAWYHVT
Sbjct: 1017 ---FMKMSKSFTKKRDAEAIGMAVRSLKKEARSWFNEKGSGLDSQADDVDAKASAWYHVT 1073
Query: 153 YHPKY---YHESSS---FLSFPWIVGDILLHIKSVNS 61
YH Y Y+E + FLSFPW V D L+ IK NS
Sbjct: 1074 YHHNYWGCYNEGMNRDHFLSFPWCVYDKLIQIKRRNS 1110
[15][TOP]
>UniRef100_Q6L3W8 RNA-directed RNA polymerase, putative n=1 Tax=Solanum demissum
RepID=Q6L3W8_SOLDE
Length = 1139
Score = 99.0 bits (245), Expect = 1e-19
Identities = 55/157 (35%), Positives = 88/157 (56%), Gaps = 9/157 (5%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
++ +A +YD++LE +GFE +++ A +K Y K+ LM +YG +TE E+L+G +
Sbjct: 973 FTRDVARRSYDVDLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKT 1032
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYH 133
+ R + I I+V+ L++EA+ WF+ + ASAWYHVTYHP Y+
Sbjct: 1033 SKTFDRRKD-----AEAISIAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWG 1087
Query: 132 ------ESSSFLSFPWIVGDILLHI---KSVNSKVLS 49
+ F+SFPW V D L+ I K++N VL+
Sbjct: 1088 CYNQGLKRDHFISFPWCVYDQLIQIKKEKALNRPVLN 1124
[16][TOP]
>UniRef100_Q0KIK9 RNA-directed RNA polymerase, putative n=1 Tax=Solanum tuberosum
RepID=Q0KIK9_SOLTU
Length = 1050
Score = 99.0 bits (245), Expect = 1e-19
Identities = 52/151 (34%), Positives = 84/151 (55%), Gaps = 6/151 (3%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
++ +A +YD +LE +GFE +++ A +K Y K+ LM++YG +TE E+L+G +
Sbjct: 884 FTRDVARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKT 943
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYH 133
+ R + I I+V+ L++EA+ WF+ + ASAWYHVTYHP Y+
Sbjct: 944 SKTFDRRKD-----AEAISIAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWG 998
Query: 132 ------ESSSFLSFPWIVGDILLHIKSVNSK 58
+ F+SFPW V D L+ IK ++
Sbjct: 999 CYNQGLKRDHFISFPWCVYDQLIQIKKEKAR 1029
[17][TOP]
>UniRef100_Q0KIR2 RNA dependent RNA polymerase family protein n=1 Tax=Solanum demissum
RepID=Q0KIR2_SOLDE
Length = 963
Score = 98.6 bits (244), Expect = 2e-19
Identities = 52/151 (34%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
++ +A +YD +LE +GFE +++ A +K Y K+ LM +YG +TE E+L+G +
Sbjct: 797 FTRDVARRSYDADLEVDGFEDYIDEAFDYKTEYDSKLGNLMDYYGIKTEAEILSGGIMKT 856
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYH 133
+ R + I I+V+ L++EA+ WF+ + ASAWYHVTYHP Y+
Sbjct: 857 SKTFDRRKD-----AEAISIAVRALRKEARTWFKRHNDIDDMLPKASAWYHVTYHPTYWG 911
Query: 132 ------ESSSFLSFPWIVGDILLHIKSVNSK 58
+ F+SFPW V D L+ IK ++
Sbjct: 912 CYNQGLKRDHFISFPWCVYDQLIQIKKEKAR 942
[18][TOP]
>UniRef100_Q6L3P3 RNA-directed RNA polymerase, putative n=1 Tax=Solanum demissum
RepID=Q6L3P3_SOLDE
Length = 1021
Score = 98.2 bits (243), Expect = 3e-19
Identities = 52/151 (34%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
++ +A +YD +LE +GFE +++ A +K Y K+ LM +YG +TE E+L+G +
Sbjct: 855 FTRDVARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKT 914
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYH 133
+ R + I I+V+ L++EA+ WF+ + ASAWYHVTYHP Y+
Sbjct: 915 SKTFDRRKD-----AEAISIAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWG 969
Query: 132 ------ESSSFLSFPWIVGDILLHIKSVNSK 58
+ F+SFPW V D L+ IK ++
Sbjct: 970 CYNQGLKRDHFISFPWCVYDQLIQIKKEKAR 1000
[19][TOP]
>UniRef100_Q6L3V2 RNA dependent RNA polymerase family protein n=1 Tax=Solanum demissum
RepID=Q6L3V2_SOLDE
Length = 963
Score = 97.8 bits (242), Expect = 3e-19
Identities = 51/151 (33%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
++ +A +YD +LE +GFE +++ A +K Y K+ LM +YG +TE E+L+G +
Sbjct: 797 FTRDVARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKA 856
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYH 133
+ R + I ++V+ L++EA+ WF+ + ASAWYHVTYHP Y+
Sbjct: 857 SKTFDRRKD-----AEAISVAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWG 911
Query: 132 ------ESSSFLSFPWIVGDILLHIKSVNSK 58
+ F+SFPW V D L+ IK ++
Sbjct: 912 CYNQGLKRDHFISFPWCVYDQLIQIKKEKAR 942
[20][TOP]
>UniRef100_Q6L3P6 RNA-directed RNA polymerase, putative n=1 Tax=Solanum demissum
RepID=Q6L3P6_SOLDE
Length = 1180
Score = 97.8 bits (242), Expect = 3e-19
Identities = 54/157 (34%), Positives = 87/157 (55%), Gaps = 9/157 (5%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
++ +A +YD +LE +GFE +++ A +K Y K+ LM +YG +TE E+L+G +
Sbjct: 1014 FTRDVARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKA 1073
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYH 133
+ R + I ++V+ L++EA+ WF+ + ASAWYHVTYHP Y+
Sbjct: 1074 SKTFDRRKD-----AEAISVAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWG 1128
Query: 132 ------ESSSFLSFPWIVGDILLHI---KSVNSKVLS 49
+ F+SFPW V D L+ I K++N VL+
Sbjct: 1129 CYNQGLKRDHFISFPWCVYDQLIQIKKEKALNRPVLN 1165
[21][TOP]
>UniRef100_A4UV17 Putative RNA-dependent RNA-polymerase n=1 Tax=Solanum tuberosum
RepID=A4UV17_SOLTU
Length = 1115
Score = 97.8 bits (242), Expect = 3e-19
Identities = 51/151 (33%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
++ +A +YD +LE +GFE +++ A +K Y K+ LM +YG +TE E+L+G +
Sbjct: 949 FTRDVARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKA 1008
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYH 133
+ R + I ++V+ L++EA+ WF+ + ASAWYHVTYHP Y+
Sbjct: 1009 SKTFDRRKD-----AEAISVAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWG 1063
Query: 132 ------ESSSFLSFPWIVGDILLHIKSVNSK 58
+ F+SFPW V D L+ IK ++
Sbjct: 1064 CYNQGLKRDHFISFPWCVYDQLIQIKKEKAR 1094
[22][TOP]
>UniRef100_Q6L447 RNA-directed RNA polymerase-like, putative n=1 Tax=Solanum demissum
RepID=Q6L447_SOLDE
Length = 1137
Score = 97.4 bits (241), Expect = 4e-19
Identities = 52/146 (35%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
Frame = -1
Query: 477 AEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQ 298
A +YD +LE +GFE +++ A +K Y K+ LM +YG +TE E+L+G + +
Sbjct: 976 ARRSYDTDLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKTSKTFD 1035
Query: 297 RDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYH----- 133
R + I I+V+ L++EA+ WF+ + ASAWYHVTYHP Y+
Sbjct: 1036 RRKD-----AEAISIAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQG 1090
Query: 132 -ESSSFLSFPWIVGDILLHIKSVNSK 58
+ F+SFPW V D L+ IK ++
Sbjct: 1091 LKRDHFISFPWCVYDQLIQIKKEKAR 1116
[23][TOP]
>UniRef100_B3SND7 RNA-dependent RNA polymerase n=1 Tax=Gossypium hirsutum
RepID=B3SND7_GOSHI
Length = 1110
Score = 97.4 bits (241), Expect = 4e-19
Identities = 58/150 (38%), Positives = 85/150 (56%), Gaps = 13/150 (8%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
YD ++E GFE +++ A HK Y K+ LM +YG +TE E+L G + + +R
Sbjct: 948 YDPDMEVEGFEDYIDDAFFHKSKYDYKLGNLMDYYGVKTEAEILGGG-------IMKMSR 1000
Query: 285 RYTDMKD--RILISVKDLQREAKEWF-----EADCQQHEYQAMASAWYHVTYHPKY---Y 136
+T +D I ++V+ L++EA+ WF E D + + A ASAWY+VTYHP Y Y
Sbjct: 1001 SFTKKRDAEAISMAVRSLRKEARSWFNEKGSELDEEIDDAYAKASAWYYVTYHPSYWGQY 1060
Query: 135 HESSS---FLSFPWIVGDILLHIKSVNSKV 55
+E + FLSFPW V D L+ IK + V
Sbjct: 1061 NEGMNRDHFLSFPWCVYDKLIQIKKEKAAV 1090
[24][TOP]
>UniRef100_Q9ZR58 RNA-directed RNA polymerase n=1 Tax=Solanum lycopersicum
RepID=Q9ZR58_SOLLC
Length = 1114
Score = 97.1 bits (240), Expect = 6e-19
Identities = 50/146 (34%), Positives = 82/146 (56%), Gaps = 6/146 (4%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
++ +A +YD ++E +GFE +++ A +K Y K+ LM +YG +TE E+L+G +
Sbjct: 948 FTRDVARRSYDADMEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKA 1007
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYYH 133
+ R + I ++V+ L++EA+ WF+ + ASAWYHVTYHP Y+
Sbjct: 1008 SKTFDRRKD-----AEAISVAVRALRKEARAWFKRRNDIDDMLPKASAWYHVTYHPTYWG 1062
Query: 132 ------ESSSFLSFPWIVGDILLHIK 73
+ + F+SFPW V D L+ IK
Sbjct: 1063 CYNQGLKRAHFISFPWCVYDQLIQIK 1088
[25][TOP]
>UniRef100_C1I213 RNA-dependent RNA polymerase n=1 Tax=Nicotiana glutinosa
RepID=C1I213_NICGU
Length = 1117
Score = 96.3 bits (238), Expect = 1e-18
Identities = 52/147 (35%), Positives = 81/147 (55%), Gaps = 6/147 (4%)
Frame = -1
Query: 480 LAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 301
+A +YD ++ NGFE +++ A +K Y K+ LM +YG +TE E+L+G + +
Sbjct: 955 VARKSYDGDMIVNGFEDYIDEAFYYKSEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTF 1014
Query: 300 QRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKY---YHE 130
R D I ++V+ L++EA+ WF+ + A ASAWYHVTYH Y Y+E
Sbjct: 1015 DRRKDA-----DAIGVAVRSLRKEARTWFKRRSDIDDMLAKASAWYHVTYHHTYWGFYNE 1069
Query: 129 S---SSFLSFPWIVGDILLHIKSVNSK 58
F+SFPW + D L+ IK ++
Sbjct: 1070 GLKRDHFISFPWCIYDQLIQIKKAKAR 1096
[26][TOP]
>UniRef100_Q9ZRX3 RNA-directed RNA polymerase (Fragment) n=1 Tax=Petunia x hybrida
RepID=Q9ZRX3_PETHY
Length = 775
Score = 94.7 bits (234), Expect = 3e-18
Identities = 52/140 (37%), Positives = 80/140 (57%), Gaps = 6/140 (4%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
++ +A +YD +LE +GFE +++ A +K Y +K+ LM +YG +TE E L+G +
Sbjct: 641 FTRDVARRSYDTDLEVDGFEDYIDEAFDYKSEYDKKLGNLMDYYGIKTEAETLSGGIMKA 700
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKY-- 139
+ D RR + I ++V+ L++EA+ WF+ + A ASAWYHV YHP Y
Sbjct: 701 SKTF--DRRRDA---EAIGVAVRSLRKEARTWFKRRSDIDDLLAKASAWYHVAYHPTYWG 755
Query: 138 -YHES---SSFLSFPWIVGD 91
Y+E F+SFPW V D
Sbjct: 756 CYNEGLKRDHFISFPWCVYD 775
[27][TOP]
>UniRef100_A5ATA5 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5ATA5_VITVI
Length = 697
Score = 94.7 bits (234), Expect = 3e-18
Identities = 56/151 (37%), Positives = 84/151 (55%), Gaps = 11/151 (7%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
++ +A +YD ++E +GFE ++ A +K Y K+ +LM YG TE E+L+G+L
Sbjct: 493 FTRDVAMQSYDADMEVDGFEDYVRDAFYYKSQYDFKLGSLMDCYGIRTESEILSGSLMKM 552
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWFE-----ADCQQHEYQAMASAWYHVTYH 148
+ D R+ + I ++V+ L++EA+ WF + A+ASAWYHVTYH
Sbjct: 553 SKSF--DKRKDA---EAIALAVRSLRKEARTWFNKMGSGTYAGADDVYAIASAWYHVTYH 607
Query: 147 PKY---YHES---SSFLSFPWIVGDILLHIK 73
P Y Y+E FLSFPW V D L+ IK
Sbjct: 608 PYYWGCYNEGMYHDHFLSFPWCVYDKLIQIK 638
[28][TOP]
>UniRef100_B9HJH5 Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa
RepID=B9HJH5_POPTR
Length = 1139
Score = 94.4 bits (233), Expect = 4e-18
Identities = 51/147 (34%), Positives = 88/147 (59%), Gaps = 7/147 (4%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
+++++A +YD ++E +GF+ ++ A +K +Y K+ +M +YG +TE E+++G++
Sbjct: 971 FTKEMARRSYDPDMEVDGFQKHIDEAFHYKSVYDNKLGNMMDYYGIKTEAEIISGSIMKV 1030
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWF-EADCQQHEYQAMASAWYHVTYHPKY- 139
+ R + D I S++ L+++A+ WF E+D + A ASAWY+VTYHP Y
Sbjct: 1031 GKSFDK-KRDF----DSINYSIRSLRKQARAWFDESDNSPDDLYAKASAWYYVTYHPSYW 1085
Query: 138 --YHESSS---FLSFPWIVGDILLHIK 73
Y+E + FLSFPW D L+ IK
Sbjct: 1086 GRYNEGMNRVHFLSFPWCFYDKLIDIK 1112
[29][TOP]
>UniRef100_Q9ZRY7 RNA-directed RNA polymerase n=1 Tax=Nicotiana tabacum
RepID=Q9ZRY7_TOBAC
Length = 1116
Score = 93.2 bits (230), Expect = 8e-18
Identities = 51/151 (33%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
++ +A +YD ++ +GFE +++ A +K Y K+ LM +YG +TE E+L+G +
Sbjct: 950 FTRDVARKSYDSDMIVDGFEDYIDEAFYYKSEYDNKLGNLMDYYGIKTEAEILSGGIMKA 1009
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKY-- 139
+ R + I ++V+ L++EA+ WF+ + A ASAWYHVTYH Y
Sbjct: 1010 SKTFDRRKD-----AEAIGVAVRCLRKEARAWFKRRSDIDDMLAKASAWYHVTYHHTYWG 1064
Query: 138 -YHES---SSFLSFPWIVGDILLHIKSVNSK 58
Y+E F+SFPW V D L+ IK ++
Sbjct: 1065 LYNEGLKRDHFISFPWCVYDQLIQIKKAKAR 1095
[30][TOP]
>UniRef100_A9T7J6 RNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9T7J6_PHYPA
Length = 843
Score = 93.2 bits (230), Expect = 8e-18
Identities = 53/148 (35%), Positives = 83/148 (56%), Gaps = 9/148 (6%)
Frame = -1
Query: 474 EDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQR 295
E A+D + G+E F++ A HK Y K+ LM YG ETE E ++G + N A ++
Sbjct: 697 ERAFDPVMVITGYEEFIDMAKFHKNEYDRKLIGLMNQYGIETEAEAVSGYMLNLA---RQ 753
Query: 294 DNRRYTDMKDRILISVKDLQREAKEWFEA---DCQQHEYQAMASAWYHVTYHPKYYHESS 124
+R D+ +RI +V+ L EA++ F+ D + A ASAWYHVTYHP++ S+
Sbjct: 754 YVKRREDVVERIRDAVRSLINEARQRFDENADDMVDDDIYAKASAWYHVTYHPEHIKVSA 813
Query: 123 S------FLSFPWIVGDILLHIKSVNSK 58
+ +SFPW++ ++LL IK +
Sbjct: 814 TGRREVHLISFPWVIYNVLLQIKKAGGR 841
[31][TOP]
>UniRef100_Q6RFH9 RNA-directed RNA polymerase 2 n=1 Tax=Hordeum vulgare subsp. vulgare
RepID=Q6RFH9_HORVD
Length = 1115
Score = 92.8 bits (229), Expect = 1e-17
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 13/157 (8%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
+++ +A +YD +L +G++ ++ A K Y K+ LM+ YG ++E E+++G +
Sbjct: 946 FTKDVARRSYDTDLIVDGYQDYITEAVWFKGEYDFKLGNLMEHYGIKSEAEIISGCILKM 1005
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWFE-------ADCQQHEYQAMASAWYHVT 154
A + + D I ++VK L++EA+ WF D + Y A ASAWYHVT
Sbjct: 1006 AKNFTKSSDA-----DAIRLAVKSLRKEARSWFSDMSADESGDVHEASY-AKASAWYHVT 1059
Query: 153 YHPKYY------HESSSFLSFPWIVGDILLHIKSVNS 61
YHP+YY +E +SFPW V D LLHIK S
Sbjct: 1060 YHPEYYGCYNKIYERPHLISFPWCVYDKLLHIKQRKS 1096
[32][TOP]
>UniRef100_B5M059 RNA-directed RNA polymerase 1a (Fragment) n=1 Tax=Hordeum vulgare
RepID=B5M059_HORVU
Length = 1114
Score = 92.8 bits (229), Expect = 1e-17
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 13/157 (8%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
+++ +A +YD +L +G++ ++ A K Y K+ LM+ YG ++E E+++G +
Sbjct: 946 FTKDVARRSYDTDLIVDGYQDYITEAVWFKGEYDFKLGNLMEHYGIKSEAEIISGCILKM 1005
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWFE-------ADCQQHEYQAMASAWYHVT 154
A + + D I ++VK L++EA+ WF D + Y A ASAWYHVT
Sbjct: 1006 AKNFTKSSDA-----DAIRLAVKSLRKEARSWFSDMSADESGDVHEASY-AKASAWYHVT 1059
Query: 153 YHPKYY------HESSSFLSFPWIVGDILLHIKSVNS 61
YHP+YY +E +SFPW V D LLHIK S
Sbjct: 1060 YHPEYYGCYNKIYERPHLISFPWCVYDKLLHIKQRKS 1096
[33][TOP]
>UniRef100_Q75ZN6 RNA-directed RNA Polymerase (Fragment) n=1 Tax=Vigna unguiculata
RepID=Q75ZN6_VIGUN
Length = 257
Score = 92.4 bits (228), Expect = 1e-17
Identities = 52/146 (35%), Positives = 83/146 (56%), Gaps = 6/146 (4%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
++ ++A +YD ++E +GF +++ A HK Y K+ LM +YG +TE E+L+GN+
Sbjct: 108 FTREVARTSYDFDMEVDGFLDYVDDAFYHKTNYDYKLGNLMDYYGIKTEAEILSGNIIKL 167
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKY-- 139
+ + RR + ++ +V L+++A+ WF + A ASAWYHVTYHP Y
Sbjct: 168 SKCFNK--RRDAEAINK---AVTSLRKDARSWFNEGNNGDDEYAKASAWYHVTYHPSYWG 222
Query: 138 -YHES---SSFLSFPWIVGDILLHIK 73
Y++ +LSFPW V LL IK
Sbjct: 223 CYNQGMGRDHYLSFPWCVFPQLLQIK 248
[34][TOP]
>UniRef100_UPI000198295F PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI000198295F
Length = 1109
Score = 90.5 bits (223), Expect = 5e-17
Identities = 54/151 (35%), Positives = 83/151 (54%), Gaps = 11/151 (7%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
++ +A +YD ++E +GFE ++ A +K Y K+ +LM G TE E+L+G++
Sbjct: 949 FTRDVAMQSYDADMEVDGFEDYVRDAFYYKSQYDFKLGSLMDCCGIRTESEILSGSIMKM 1008
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWFE-----ADCQQHEYQAMASAWYHVTYH 148
+ D R+ + I ++V+ L++EA+ WF + A+ASAWYHVTYH
Sbjct: 1009 SKSF--DKRKDA---EAIALAVRSLRKEARTWFNKMGSGTYAGADDVYAIASAWYHVTYH 1063
Query: 147 PKY---YHES---SSFLSFPWIVGDILLHIK 73
P Y Y+E FLSFPW V D L+ IK
Sbjct: 1064 PYYWGCYNEGMYHDHFLSFPWCVYDKLIQIK 1094
[35][TOP]
>UniRef100_A7P3W3 Chromosome chr1 scaffold_5, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7P3W3_VITVI
Length = 1076
Score = 90.5 bits (223), Expect = 5e-17
Identities = 54/151 (35%), Positives = 83/151 (54%), Gaps = 11/151 (7%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
++ +A +YD ++E +GFE ++ A +K Y K+ +LM G TE E+L+G++
Sbjct: 916 FTRDVAMQSYDADMEVDGFEDYVRDAFYYKSQYDFKLGSLMDCCGIRTESEILSGSIMKM 975
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWFE-----ADCQQHEYQAMASAWYHVTYH 148
+ D R+ + I ++V+ L++EA+ WF + A+ASAWYHVTYH
Sbjct: 976 SKSF--DKRKDA---EAIALAVRSLRKEARTWFNKMGSGTYAGADDVYAIASAWYHVTYH 1030
Query: 147 PKY---YHES---SSFLSFPWIVGDILLHIK 73
P Y Y+E FLSFPW V D L+ IK
Sbjct: 1031 PYYWGCYNEGMYHDHFLSFPWCVYDKLIQIK 1061
[36][TOP]
>UniRef100_A4UBI7 Putative RNA-directed RNA polymerase 1 n=1 Tax=Nicotiana attenuata
RepID=A4UBI7_9SOLA
Length = 1044
Score = 90.5 bits (223), Expect = 5e-17
Identities = 51/147 (34%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Frame = -1
Query: 480 LAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 301
+A +Y ++ NGFE + + A +K Y K+ LM +YG +TE E+L+G + +
Sbjct: 882 VARKSYAGDMIVNGFEDYTDEAFYYKSEYDNKLGNLMDYYGIKTEAEILSGGVMKASKTF 941
Query: 300 QRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKY---YHE 130
R + I ++V+ L++EA+ WF+ + A ASAWYHVTYH Y Y+E
Sbjct: 942 DRRKDA-----EAIGVAVRSLRKEARTWFKKRSDIDDMLAKASAWYHVTYHHTYWGLYNE 996
Query: 129 S---SSFLSFPWIVGDILLHIKSVNSK 58
F+SFPW V D L+ IK ++
Sbjct: 997 GLRRDHFISFPWCVYDQLIQIKKAKAR 1023
[37][TOP]
>UniRef100_B2B9K0 RNA-dependent RNA polymerase n=1 Tax=Gossypium hirsutum
RepID=B2B9K0_GOSHI
Length = 1110
Score = 89.4 bits (220), Expect = 1e-16
Identities = 54/144 (37%), Positives = 82/144 (56%), Gaps = 13/144 (9%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
YD ++E GF +++ A +K Y K+ LM +YG +TE E+L+G + + +R
Sbjct: 948 YDPDMEVEGFVDYIDDAFFYKSKYDYKLGNLMDYYGVKTEAEILSGG-------IMKMSR 1000
Query: 285 RYTDMKD--RILISVKDLQREAKEWF-----EADCQQHEYQAMASAWYHVTYHPKY---Y 136
+T +D I ++V+ L++EA+ WF E D + + A ASAWY+VTYH Y Y
Sbjct: 1001 SFTKKRDAESISMAVRSLRKEARSWFNEKGSELDEEIDDAYAKASAWYYVTYHHSYWGQY 1060
Query: 135 HESSS---FLSFPWIVGDILLHIK 73
+E + FLSFPW V D L+ IK
Sbjct: 1061 NEGMNRDHFLSFPWCVYDKLIQIK 1084
[38][TOP]
>UniRef100_Q9LQV2 F10B6.19 n=1 Tax=Arabidopsis thaliana RepID=Q9LQV2_ARATH
Length = 1107
Score = 89.0 bits (219), Expect = 2e-16
Identities = 54/147 (36%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Frame = -1
Query: 480 LAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 301
+A +YD ++E +GFE +++ A K Y K+ LM +YG +TE E+L+G +
Sbjct: 948 VASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGG-------I 1000
Query: 300 QRDNRRYTDMKDRILI--SVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKY---Y 136
R ++ +T +D I +V+ L++E F A ++ A ASAWYHVTYH Y Y
Sbjct: 1001 MRMSKSFTKRRDAESIGRAVRALRKETLSLFNASEEEENESAKASAWYHVTYHSSYWGLY 1060
Query: 135 HES---SSFLSFPWIVGDILLHIKSVN 64
+E FLSF W V D L+ IK N
Sbjct: 1061 NEGLNRDHFLSFAWCVYDKLVRIKKTN 1087
[39][TOP]
>UniRef100_Q8H1K9 RNA-dependent RNA polymerase 1 n=1 Tax=Arabidopsis thaliana
RepID=Q8H1K9_ARATH
Length = 1107
Score = 89.0 bits (219), Expect = 2e-16
Identities = 54/147 (36%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Frame = -1
Query: 480 LAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYL 301
+A +YD ++E +GFE +++ A K Y K+ LM +YG +TE E+L+G +
Sbjct: 948 VASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGG-------I 1000
Query: 300 QRDNRRYTDMKDRILI--SVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKY---Y 136
R ++ +T +D I +V+ L++E F A ++ A ASAWYHVTYH Y Y
Sbjct: 1001 MRMSKSFTKRRDAESIGRAVRALRKETLSLFNASEEEENESAKASAWYHVTYHSSYWGLY 1060
Query: 135 HES---SSFLSFPWIVGDILLHIKSVN 64
+E FLSF W V D L+ IK N
Sbjct: 1061 NEGLNRDHFLSFAWCVYDKLVRIKKTN 1087
[40][TOP]
>UniRef100_B9HVU2 Rna-dependent RNA polymerase (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9HVU2_POPTR
Length = 1102
Score = 87.4 bits (215), Expect = 4e-16
Identities = 52/151 (34%), Positives = 82/151 (54%), Gaps = 11/151 (7%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
++++ A+ +YD ++E +GF+ ++ A +K Y K+ +M +YG +TE E++ G
Sbjct: 958 FTKEAAKRSYDPDMEVDGFKDYINEAFYYKSEYDNKLGNMMDYYGIKTEAEIIGG----- 1012
Query: 312 ASYLQRDNRRYTDMKD--RILISVKDLQREAKEWFEADCQQH---EYQAMASAWYHVTYH 148
+ R R + KD I SV L+++A+ WF + + ASAWYHVTYH
Sbjct: 1013 --CIMRMGRSFDKKKDLEGINFSVSSLRKQARAWFNESGSKESPDDVYRKASAWYHVTYH 1070
Query: 147 PKY---YHESSS---FLSFPWIVGDILLHIK 73
P++ Y+E FLSFPW V D L IK
Sbjct: 1071 PRFWGLYNEGMDRVHFLSFPWCVHDKLFEIK 1101
[41][TOP]
>UniRef100_C7F747 Putative RNA-dependent RNA polymerase n=1 Tax=Zea mays
RepID=C7F747_MAIZE
Length = 1108
Score = 84.7 bits (208), Expect = 3e-15
Identities = 49/150 (32%), Positives = 82/150 (54%), Gaps = 10/150 (6%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
++ ++A +YD +L +G+E ++ A KE Y ++ LM YG ++E E+++G +
Sbjct: 948 FTREVARRSYDTDLIVDGYEDYITEAIEFKEEYDFRLGNLMDHYGIKSEAEIISGCILKM 1007
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWFE----ADCQQHEYQAMASAWYHVTYHP 145
A N + D I ++V+ L++EA+ WF + Q +A ASAWYHVTYH
Sbjct: 1008 AK-----NFTKSSDADAIRMAVRSLRKEARSWFNEMSTGEDGQDAMEAKASAWYHVTYHQ 1062
Query: 144 KYY------HESSSFLSFPWIVGDILLHIK 73
+Y+ ++ +SFPW V D L+ IK
Sbjct: 1063 QYWGSYNEGYDRPHLISFPWCVYDKLVAIK 1092
[42][TOP]
>UniRef100_A4UV46 Putative RNA-dependent RNA-polymerase n=1 Tax=Solanum tuberosum
RepID=A4UV46_SOLTU
Length = 1065
Score = 84.7 bits (208), Expect = 3e-15
Identities = 42/119 (35%), Positives = 68/119 (57%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
++ +A +YD +LE +GFE +++ A +K Y K+ LM +YG +TE E+L+G +
Sbjct: 948 FTRDVARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKT 1007
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHEYQAMASAWYHVTYHPKYY 136
+ R + I I+V+ L++EA+ WF+ + ASAWYHVTYHP Y+
Sbjct: 1008 SKTFDRRKD-----AEAISIAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYW 1061
[43][TOP]
>UniRef100_C5XZ94 Putative uncharacterized protein Sb04g028630 n=1 Tax=Sorghum bicolor
RepID=C5XZ94_SORBI
Length = 1114
Score = 84.3 bits (207), Expect = 4e-15
Identities = 49/150 (32%), Positives = 83/150 (55%), Gaps = 10/150 (6%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
++ ++A+ +YD +L +G+E ++ A KE Y ++ LM YG ++E E+++G
Sbjct: 948 FTREVAKRSYDTDLIVDGYEDYITEAIEFKEEYDFRLGNLMDHYGIKSEAEIISGCFLKM 1007
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWFE----ADCQQHEYQAMASAWYHVTYHP 145
A N + D I ++V+ L++EA+ WF ++ Q +A ASAWYHVTY P
Sbjct: 1008 AK-----NFTKSSDADAIRMAVRSLRKEARSWFNEMSTSEDDQDATEAKASAWYHVTYDP 1062
Query: 144 KYY------HESSSFLSFPWIVGDILLHIK 73
+Y+ ++ +SFPW V D L+ IK
Sbjct: 1063 QYWGNYNEGYDRPHLISFPWCVYDKLVIIK 1092
[44][TOP]
>UniRef100_Q9SG02 Putative RNA-directed RNA polymerase; 73997-69985 n=1 Tax=Arabidopsis
thaliana RepID=Q9SG02_ARATH
Length = 1196
Score = 84.0 bits (206), Expect = 5e-15
Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 21/152 (13%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
YD LE GFE + A HK +Y ++ L+ Y + E+E++TG++ + Y ++
Sbjct: 1022 YDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKY---TSK 1078
Query: 285 RYTDMKDRILISVKDLQREAKEWFEADCQQHE----------YQAMASAWYHVTYHPKYY 136
+ ++K+R+ S L++E ++ FE HE Y+ ASAWYHVTYHP++
Sbjct: 1079 KQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEWV 1138
Query: 135 HES-----------SSFLSFPWIVGDILLHIK 73
+S ++ LSF WI D L IK
Sbjct: 1139 KKSLELQDPDESSHAAMLSFAWIAADYLARIK 1170
[45][TOP]
>UniRef100_Q6RFI0 RNA-directed RNA polymerase 1 n=1 Tax=Hordeum vulgare subsp. vulgare
RepID=Q6RFI0_HORVD
Length = 1115
Score = 83.2 bits (204), Expect = 8e-15
Identities = 51/153 (33%), Positives = 80/153 (52%), Gaps = 13/153 (8%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
+++ +A +YD +L +G++ ++ A KE Y K+ LM+ YG +E E+++G +
Sbjct: 945 FTKDVATLSYDTDLIVDGYQDYITEAVWFKEEYDFKLGNLMEHYGINSEAEIISGCILKM 1004
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWF------EADCQQHEYQAMASAWYHVTY 151
A + + D I ++VK L++EA+ WF E+ A ASAWYHVTY
Sbjct: 1005 AKNFTKKSD-----ADAIRLAVKSLRKEARSWFSEMGSDESGDGHKALVAKASAWYHVTY 1059
Query: 150 HPKY-------YHESSSFLSFPWIVGDILLHIK 73
HP+Y Y +SFPW V D L+ IK
Sbjct: 1060 HPQYWGCYNEGYDHRPHLISFPWCVYDKLILIK 1092
[46][TOP]
>UniRef100_B5M060 RNA-directed RNA polymerase 1b n=1 Tax=Hordeum vulgare
RepID=B5M060_HORVU
Length = 1115
Score = 83.2 bits (204), Expect = 8e-15
Identities = 51/153 (33%), Positives = 80/153 (52%), Gaps = 13/153 (8%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
+++ +A +YD +L +G++ ++ A KE Y K+ LM+ YG +E E+++G +
Sbjct: 945 FTKDVATLSYDTDLIVDGYQDYITEAVWFKEEYDFKLGNLMEHYGINSEAEIISGCILKM 1004
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWF------EADCQQHEYQAMASAWYHVTY 151
A + + D I ++VK L++EA+ WF E+ A ASAWYHVTY
Sbjct: 1005 AKNFTKKSD-----ADAIRLAVKSLRKEARSWFSEMGSDESGDGHKALVAKASAWYHVTY 1059
Query: 150 HPKY-------YHESSSFLSFPWIVGDILLHIK 73
HP+Y Y +SFPW V D L+ IK
Sbjct: 1060 HPQYWGCYNKGYDHRPHLISFPWCVYDKLILIK 1092
[47][TOP]
>UniRef100_Q9LKP0 RNA-dependent RNA polymerase n=1 Tax=Arabidopsis thaliana
RepID=Q9LKP0_ARATH
Length = 1196
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 21/152 (13%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
YD LE GFE + A HK Y ++ L+ Y + E+E++TG++ + Y ++
Sbjct: 1022 YDAVLEIPGFEDLIPEAWGHKCSYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKY---TSK 1078
Query: 285 RYTDMKDRILISVKDLQREAKEWFEADCQQHE----------YQAMASAWYHVTYHPKYY 136
+ ++K+R+ S L++E ++ FE HE Y+ ASAWYHVTYHP++
Sbjct: 1079 KQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEWV 1138
Query: 135 HES-----------SSFLSFPWIVGDILLHIK 73
+S ++ LSF WI D L IK
Sbjct: 1139 KKSLELQDPDESSHAAMLSFAWIAADYLARIK 1170
[48][TOP]
>UniRef100_B9F2V8 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group
RepID=B9F2V8_ORYSJ
Length = 1027
Score = 82.0 bits (201), Expect = 2e-14
Identities = 48/152 (31%), Positives = 85/152 (55%), Gaps = 12/152 (7%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
++ ++A +YD ++ +G+E ++ A + K+ Y K+ LM YG ++E E+++G +
Sbjct: 860 FTREVARRSYDTDMIVDGYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKM 919
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWF---EADCQQHEY---QAMASAWYHVTY 151
A + + D I ++V+ L++EA+ F D H + +A ASAWYHVTY
Sbjct: 920 AKNFTKKSD-----ADAIRLAVRSLRKEARSRFSEMSLDDNGHGHDASEAKASAWYHVTY 974
Query: 150 HPKYY------HESSSFLSFPWIVGDILLHIK 73
HP+++ +E F+SFPW + + LL IK
Sbjct: 975 HPEFWGCYNEGYERPHFISFPWCIYEKLLRIK 1006
[49][TOP]
>UniRef100_A2X9D0 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2X9D0_ORYSI
Length = 1067
Score = 82.0 bits (201), Expect = 2e-14
Identities = 48/152 (31%), Positives = 85/152 (55%), Gaps = 12/152 (7%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
++ ++A +YD ++ +G+E ++ A + K+ Y K+ LM YG ++E E+++G +
Sbjct: 900 FTREVARRSYDTDMIVDGYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKM 959
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWF---EADCQQHEY---QAMASAWYHVTY 151
A + + D I ++V+ L++EA+ F D H + +A ASAWYHVTY
Sbjct: 960 AKNFTKKSD-----ADAIRLAVRSLRKEARSRFSEMSLDDNGHGHDASEAKASAWYHVTY 1014
Query: 150 HPKYY------HESSSFLSFPWIVGDILLHIK 73
HP+++ +E F+SFPW + + LL IK
Sbjct: 1015 HPEFWGCYNEGYERPHFISFPWCIYEKLLRIK 1046
[50][TOP]
>UniRef100_Q0DXS3 Probable RNA-dependent RNA polymerase 1 n=1 Tax=Oryza sativa Japonica
Group RepID=RDR1_ORYSJ
Length = 740
Score = 82.0 bits (201), Expect = 2e-14
Identities = 48/152 (31%), Positives = 85/152 (55%), Gaps = 12/152 (7%)
Frame = -1
Query: 492 WSEKLAEDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNR 313
++ ++A +YD ++ +G+E ++ A + K+ Y K+ LM YG ++E E+++G +
Sbjct: 573 FTREVARRSYDTDMIVDGYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKM 632
Query: 312 ASYLQRDNRRYTDMKDRILISVKDLQREAKEWF---EADCQQHEY---QAMASAWYHVTY 151
A + + D I ++V+ L++EA+ F D H + +A ASAWYHVTY
Sbjct: 633 AKNFTKKSD-----ADAIRLAVRSLRKEARSRFSEMSLDDNGHGHDASEAKASAWYHVTY 687
Query: 150 HPKYY------HESSSFLSFPWIVGDILLHIK 73
HP+++ +E F+SFPW + + LL IK
Sbjct: 688 HPEFWGCYNEGYERPHFISFPWCIYEKLLRIK 719
[51][TOP]
>UniRef100_B8A9C4 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8A9C4_ORYSI
Length = 307
Score = 80.1 bits (196), Expect = 7e-14
Identities = 52/152 (34%), Positives = 78/152 (51%), Gaps = 21/152 (13%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
YD++LE G FL +A K Y +++AL+ Y TE EL+TG++ S ++ ++
Sbjct: 133 YDIDLEVPGASDFLASAWQCKCSYDAQLSALLSQYRVRTEAELVTGHI---TSLVKNSSK 189
Query: 285 RYTDMKDRILISVKDLQREAKEWFEA----DCQQHE------YQAMASAWYHVTYHPKYY 136
+ D+KDR+ + L++E K FE+ C+ + Y+ ASAWY VTYHPK+
Sbjct: 190 KQGDIKDRLKTAYSALRKEFKSTFESIASDQCEIDDDEKNLLYEMKASAWYQVTYHPKWV 249
Query: 135 HESSSF-----------LSFPWIVGDILLHIK 73
+S LSF WI D L IK
Sbjct: 250 EKSRGILGPDGEEIPASLSFAWIPVDYLARIK 281
[52][TOP]
>UniRef100_C5Z764 Putative uncharacterized protein Sb10g025950 n=1 Tax=Sorghum bicolor
RepID=C5Z764_SORBI
Length = 1239
Score = 78.2 bits (191), Expect = 3e-13
Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Frame = -1
Query: 474 EDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQR 295
E YD++LE G +FLE A K +Y ++ L+ YG +E EL+TG + Y
Sbjct: 1079 ETPYDIDLEVPGALSFLEDAWQCKCLYEAQLNTLLSQYGLRSEAELVTGEIWPLVGY--- 1135
Query: 294 DNRRYTDMKDRILISVKDLQREAKEWFEA------DCQQHEYQAMASAWYHVTYHPKYY- 136
N+ +K+RI + L +E + FE+ D + Y+ ASAWY VTYHP++
Sbjct: 1136 -NKYQYQLKERINYAYSKLHQEFRSIFESIDISYCDNKNLAYEMKASAWYQVTYHPEFIR 1194
Query: 135 ------HESSSFLSFPWIVGDILLHIK 73
++ + LSF WI D L IK
Sbjct: 1195 LREPDDEKTPARLSFAWIAVDYLAQIK 1221
[53][TOP]
>UniRef100_UPI0000DD8B5B Os01g0527600 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000DD8B5B
Length = 385
Score = 77.4 bits (189), Expect = 5e-13
Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 21/152 (13%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
YD++LE G FL +A K Y +++AL+ Y TE EL+TG++ ++ ++
Sbjct: 211 YDIDLEVPGASDFLASAWQCKCSYDAQLSALLSQYRVRTEAELVTGHI---TFLVKNSSK 267
Query: 285 RYTDMKDRILISVKDLQREAKEWFEA----------DCQQHEYQAMASAWYHVTYHPKYY 136
+ D+KDR+ + L++E K FE+ D + Y+ ASAWY VTYHPK+
Sbjct: 268 KQGDIKDRLKTAYSALRKEFKSTFESIASDQCEIGDDEKNLLYEMKASAWYQVTYHPKWV 327
Query: 135 HESSSF-----------LSFPWIVGDILLHIK 73
+S LSF WI D L IK
Sbjct: 328 EKSRGILGPDGEEIPASLSFAWIPVDYLARIK 359
[54][TOP]
>UniRef100_C5Z766 Putative uncharacterized protein Sb10g025970 n=1 Tax=Sorghum bicolor
RepID=C5Z766_SORBI
Length = 1251
Score = 77.4 bits (189), Expect = 5e-13
Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 14/148 (9%)
Frame = -1
Query: 474 EDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQR 295
E+ YD +LE G +FLE A K +Y ++ L+ +G +E EL+TG + + Y
Sbjct: 1099 ENQYDTDLEVPGALSFLEDAWKCKCLYEAQLNTLLNQFGVHSEAELVTGEIWSLVGY--- 1155
Query: 294 DNRRYT-DMKDRILISVKDLQREAKEWFEA------DCQQHEYQAMASAWYHVTYHPKYY 136
N++Y +K+R+ + L +E + FE+ D + Y+ ASAWY VTYHP++
Sbjct: 1156 -NKKYQYQLKERLNYAYSKLHQEFRSIFESIDVSYGDSKNLAYEMKASAWYQVTYHPEFI 1214
Query: 135 -------HESSSFLSFPWIVGDILLHIK 73
++ + LSF WI D L IK
Sbjct: 1215 RLRELDDEKTPARLSFAWIPVDYLAQIK 1242
[55][TOP]
>UniRef100_B9EXA5 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group
RepID=B9EXA5_ORYSJ
Length = 1571
Score = 77.4 bits (189), Expect = 5e-13
Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 21/152 (13%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
YD++LE G FL +A K Y +++AL+ Y TE EL+TG++ ++ ++
Sbjct: 1397 YDIDLEVPGASDFLASAWQCKCSYDAQLSALLSQYRVRTEAELVTGHI---TFLVKNSSK 1453
Query: 285 RYTDMKDRILISVKDLQREAKEWFEA----------DCQQHEYQAMASAWYHVTYHPKYY 136
+ D+KDR+ + L++E K FE+ D + Y+ ASAWY VTYHPK+
Sbjct: 1454 KQGDIKDRLKTAYSALRKEFKSTFESIASDQCEIGDDEKNLLYEMKASAWYQVTYHPKWV 1513
Query: 135 HESSSF-----------LSFPWIVGDILLHIK 73
+S LSF WI D L IK
Sbjct: 1514 EKSRGILGPDGEEIPASLSFAWIPVDYLARIK 1545
[56][TOP]
>UniRef100_Q8LHH9 Probable RNA-dependent RNA polymerase SHL2 n=1 Tax=Oryza sativa
Japonica Group RepID=SHL2_ORYSJ
Length = 1218
Score = 77.4 bits (189), Expect = 5e-13
Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 21/152 (13%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
YD++LE G FL +A K Y +++AL+ Y TE EL+TG++ ++ ++
Sbjct: 1044 YDIDLEVPGASDFLASAWQCKCSYDAQLSALLSQYRVRTEAELVTGHI---TFLVKNSSK 1100
Query: 285 RYTDMKDRILISVKDLQREAKEWFEA----------DCQQHEYQAMASAWYHVTYHPKYY 136
+ D+KDR+ + L++E K FE+ D + Y+ ASAWY VTYHPK+
Sbjct: 1101 KQGDIKDRLKTAYSALRKEFKSTFESIASDQCEIGDDEKNLLYEMKASAWYQVTYHPKWV 1160
Query: 135 HESSSF-----------LSFPWIVGDILLHIK 73
+S LSF WI D L IK
Sbjct: 1161 EKSRGILGPDGEEIPASLSFAWIPVDYLARIK 1192
[57][TOP]
>UniRef100_B9HA49 Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa
RepID=B9HA49_POPTR
Length = 1198
Score = 74.7 bits (182), Expect = 3e-12
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
YDL+LE G F+ A K Y ++ L+ Y + E+E++TG++ S + +R
Sbjct: 1024 YDLDLEVLGATDFISDAWDRKCSYDGQLNGLLAQYKVKREEEVVTGHVW---SMPKGSSR 1080
Query: 285 RYTDMKDRILISVKDLQREAKEWFEA----------DCQQHEYQAMASAWYHVTYHPKYY 136
+ D+K+R+ S L+RE ++ FE D + Y+ ASAWY VTYHP +
Sbjct: 1081 KQGDLKERLKHSYNCLKREFRQVFEKMDLDFGQLDDDEKNMLYERKASAWYQVTYHPHWI 1140
Query: 135 HES-----------SSFLSFPWIVGDILLHIKSVNSKV 55
+S S LSF WI D L IK +S++
Sbjct: 1141 QKSLELQDSDGAGISVMLSFAWIAADYLARIKIRHSRI 1178
[58][TOP]
>UniRef100_B4FZU3 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FZU3_MAIZE
Length = 552
Score = 72.4 bits (176), Expect = 1e-11
Identities = 49/152 (32%), Positives = 73/152 (48%), Gaps = 21/152 (13%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
YD ++E G FL +A K Y ++ AL+ YG TE EL+T ++ + Y +R
Sbjct: 378 YDADMEVAGAADFLSSAWQCKCSYETQLNALLNQYGVRTEAELVTEHIWSLPKY---SSR 434
Query: 285 RYTDMKDRILISVKDLQREAKEWFEA----------DCQQHEYQAMASAWYHVTYHPKYY 136
R D+K+R+ + L +E + FE+ D + Y+ ASAWY VTYHP++
Sbjct: 435 RQGDIKERLKNAYYALHKEFRSIFESIVTDQTEISDDEKSRFYEMKASAWYQVTYHPEWV 494
Query: 135 HESSSF-----------LSFPWIVGDILLHIK 73
+S LSF WI + L IK
Sbjct: 495 QKSREMFKSDCEDMPARLSFAWIAVEHLARIK 526
[59][TOP]
>UniRef100_B6DZR9 RNA-directed RNA polymerase 6a (Fragment) n=1 Tax=Hordeum vulgare
RepID=B6DZR9_HORVU
Length = 1047
Score = 71.6 bits (174), Expect = 3e-11
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 27/158 (17%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
YD ++E G FL +A K Y ++ AL+K YG TE EL+T ++ + Y ++R
Sbjct: 867 YDTDMEVPGAADFLSSAWQCKCSYEAQLDALLKQYGVRTEAELVTEHIWSLPKY---NSR 923
Query: 285 RYTDMKDRILISVKDLQREAKEWFEA--------------DCQQHEYQAMASAWYHVTYH 148
+ D+K+R+ + L++E + FE+ D + Y+ ASAWY VTYH
Sbjct: 924 KQGDIKERLKNAYSALRKEYRAIFESVEAPGQAKAVALDDDERNRVYEMKASAWYQVTYH 983
Query: 147 PKYYHES-------------SSFLSFPWIVGDILLHIK 73
PK+ S + LSF WI + L IK
Sbjct: 984 PKWVERSREALLEPDREEDTPARLSFAWIPVEHLARIK 1021
[60][TOP]
>UniRef100_B9IKW9 Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa
RepID=B9IKW9_POPTR
Length = 1200
Score = 70.9 bits (172), Expect = 4e-11
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 21/152 (13%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
YD +LE G ++ A K Y ++ L+ Y + E+E++TG++ + Y +R
Sbjct: 1026 YDSDLEVVGASDYISDAWDQKCSYDGQLNGLLSQYKVKREEEVVTGHIWSMPKY---SSR 1082
Query: 285 RYTDMKDRILISVKDLQREAKEWFEADCQQHE----------YQAMASAWYHVTYHPKYY 136
+ ++KDR+ S L++E ++ FE + E Y+ ASAWY V YHP +
Sbjct: 1083 KQGELKDRLKHSYNSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQVVYHPHWV 1142
Query: 135 HES-----------SSFLSFPWIVGDILLHIK 73
+S S LSF WI D L IK
Sbjct: 1143 KKSLELQDPDGAGTSVMLSFAWIAADYLARIK 1174
[61][TOP]
>UniRef100_C5XM68 Putative uncharacterized protein Sb03g022880 n=1 Tax=Sorghum bicolor
RepID=C5XM68_SORBI
Length = 1207
Score = 70.1 bits (170), Expect = 7e-11
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 21/152 (13%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
YD ++E G FL +A K Y ++ AL+ YG TE EL+T ++ + Y +R
Sbjct: 1033 YDADMEVPGATDFLSSAWECKCSYETQLNALLNQYGVRTEAELVTEHIWSLPKY---SSR 1089
Query: 285 RYTDMKDRILISVKDLQREAKEWFEA----------DCQQHEYQAMASAWYHVTYHPKYY 136
+ D+K+R+ + L ++ + FE+ D + Y+ ASAWY VTYHPK+
Sbjct: 1090 KQGDIKERLKNAYSALHKDFRSIFESFVTDQTEISDDEKIRFYEMKASAWYQVTYHPKWV 1149
Query: 135 HESSSF-----------LSFPWIVGDILLHIK 73
+S LSF WI + L IK
Sbjct: 1150 QKSREMLKPDFEDMPARLSFAWIGVEHLARIK 1181
[62][TOP]
>UniRef100_B9RP51 RNA-dependent RNA polymerase, putative n=1 Tax=Ricinus communis
RepID=B9RP51_RICCO
Length = 1203
Score = 70.1 bits (170), Expect = 7e-11
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 21/152 (13%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
YD +LE +G ++ A K Y ++ L+ Y + E+E++TG++ S + ++R
Sbjct: 1029 YDKDLEVSGSSDYILDAWDQKCSYDGQLKGLLAQYKVKREEEVVTGHIW---SMPKCNSR 1085
Query: 285 RYTDMKDRILISVKDLQREAKEWFEADCQQHE----------YQAMASAWYHVTYHPKYY 136
+ ++K+R+ S L++E ++ FE E Y+ ASAWY V YHPK+
Sbjct: 1086 KQGELKERLKQSYHSLKKEFRQVFEKMDSDFEQLTEDEKNLLYEQKASAWYQVAYHPKWV 1145
Query: 135 HES-----------SSFLSFPWIVGDILLHIK 73
++S +S LSF WI D L IK
Sbjct: 1146 NKSMELQEPDAAGCASMLSFAWIAADYLARIK 1177
[63][TOP]
>UniRef100_C6T7X1 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T7X1_SOYBN
Length = 290
Score = 67.4 bits (163), Expect = 5e-10
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 28/159 (17%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
YD +LE G F+ A K Y +++ L+ Y + E+E++TG + + Y ++R
Sbjct: 107 YDKDLEVPGSADFIADAWEQKCSYDGQLSGLLGQYKVKREEEVVTGQIWSMPKY---NSR 163
Query: 285 RYTDMKDRILISVKDLQREAKEWFE------ADCQQHE----YQAMASAWYHVTYHPKYY 136
+ ++K+R+ S L++E + FE + + E Y+ ASAWY VTYHP++
Sbjct: 164 KQGELKERLKHSYSALKKEFRHTFEKLNSDVGELSEEEKNLFYEQKASAWYQVTYHPEWV 223
Query: 135 HE------------------SSSFLSFPWIVGDILLHIK 73
+ S+ LSFPWI D L K
Sbjct: 224 KKSLDLQDKSSENQEADSLGSTVMLSFPWIAVDYLARTK 262
[64][TOP]
>UniRef100_A9CRC9 RNA-dependent RNA polymerase 6 n=1 Tax=Nicotiana tabacum
RepID=A9CRC9_TOBAC
Length = 1197
Score = 66.6 bits (161), Expect = 8e-10
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 21/152 (13%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
YD LE G AF++ A + K Y ++ L+ Y E+E++TG++ + Y +
Sbjct: 1023 YDSTLEILGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKY---SAK 1079
Query: 285 RYTDMKDRILISVKDLQREAKEWFEA----------DCQQHEYQAMASAWYHVTYHPKYY 136
+ ++K+R+ + L++E + FE D + Y+ ASAWY VTYHP +
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYHPHWV 1139
Query: 135 HES-----------SSFLSFPWIVGDILLHIK 73
S + LSF WI D L IK
Sbjct: 1140 ARSLELQLPDAVSNTVMLSFAWIAADYLARIK 1171
[65][TOP]
>UniRef100_C3Z3S5 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3Z3S5_BRAFL
Length = 1922
Score = 65.1 bits (157), Expect = 2e-09
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 17/151 (11%)
Frame = -1
Query: 474 EDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTG---NLQNRASY 304
+D D +L GFE++ + A + +Y K+ ++M YG +E E+++G ++ R
Sbjct: 984 DDGVDQDLIREGFESYTDDAQTQLNIYNTKIRSIMSLYGISSEGEVVSGCILKVKQRLGL 1043
Query: 303 LQRDNRRYTDMKDRILISVKDLQR----------EAKEWFEADCQQHEYQAMASAWYHVT 154
L+ N R+ ++ + + K L R + KE D ++ E ASAWY VT
Sbjct: 1044 LK--NERF-EVTEYVRARFKTLWRKTRAEFFRQFDEKEESSTDRRREEQLKKASAWYMVT 1100
Query: 153 YHPKYYHE----SSSFLSFPWIVGDILLHIK 73
Y Y ++ S LSFPW+V D+L +K
Sbjct: 1101 YSDDYNNKPHGASPKLLSFPWVVYDVLGGLK 1131
[66][TOP]
>UniRef100_C5YIV2 Putative uncharacterized protein Sb07g006150 n=1 Tax=Sorghum bicolor
RepID=C5YIV2_SORBI
Length = 1220
Score = 64.7 bits (156), Expect = 3e-09
Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 23/161 (14%)
Frame = -1
Query: 486 EKLAED---AYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQN 316
E L +D AYD++LE G F A K Y ++ AL+ Y TE EL+TG + +
Sbjct: 1052 ESLIKDGMPAYDIDLEVPGASHFFLDAWQWKCAYESRLNALLNQYSGCTEAELVTGVIWS 1111
Query: 315 RASYLQRDNRRYTDMKDRILISVKDLQREAKEWFEADCQQHE----------YQAMASAW 166
A +R + ++ + +L +E + FE + Y+ ASAW
Sbjct: 1112 LADGRKRKKH---EANEKFSHAYPELHQEFRRVFENIAADQDRMSDEKKNLVYEMKASAW 1168
Query: 165 YHVTYHPKYY----------HESSSFLSFPWIVGDILLHIK 73
Y VTYHP++ E + LSFPWI D L IK
Sbjct: 1169 YQVTYHPEWIRFSREKEPHGEERPARLSFPWIAIDYLACIK 1209
[67][TOP]
>UniRef100_B3TNC1 RNA-dependent RNA polymerase n=1 Tax=Nicotiana attenuata
RepID=B3TNC1_9SOLA
Length = 1197
Score = 64.7 bits (156), Expect = 3e-09
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 21/152 (13%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
YD +LE G AF++ A + K Y ++ L+ Y E+E++TG++ + Y +
Sbjct: 1023 YDSSLEIPGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKY---SAK 1079
Query: 285 RYTDMKDRILISVKDLQREAKEWFEA----------DCQQHEYQAMASAWYHVTYHPKYY 136
+ ++K+R+ + L++E + FE D + Y+ ASAWY VTY+P +
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYNPHWV 1139
Query: 135 H-----------ESSSFLSFPWIVGDILLHIK 73
S+ LSF WI D L IK
Sbjct: 1140 ARSLELQLPDAVSSTVMLSFAWIAADYLARIK 1171
[68][TOP]
>UniRef100_A7P5T3 Chromosome chr4 scaffold_6, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7P5T3_VITVI
Length = 1197
Score = 63.5 bits (153), Expect = 7e-09
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 22/153 (14%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
+D +L G F+ A HK Y ++ L+ Y + E+E++TG++ + Y +R
Sbjct: 1022 FDEDLGIPGSADFINDAWIHKCSYDGQLNGLLGQYKVKREEEVVTGHVWSMPKY---KSR 1078
Query: 285 RYTDMKDRILISVKDLQREAKEWFEA----------DCQQHEYQAMASAWYHVTYHPKYY 136
+ ++ +R+ + L++E ++ FE D + Y+ ASAWY VTYHP +
Sbjct: 1079 KQGELTERLKHAYSSLKKEFRQIFEKMNSDFDQLTDDEKNRLYEQKASAWYQVTYHPTWV 1138
Query: 135 HESSS------------FLSFPWIVGDILLHIK 73
+S LSF WI D L IK
Sbjct: 1139 KKSLELQNPDEVFGERVMLSFAWITADYLARIK 1171
[69][TOP]
>UniRef100_C3ZPA8 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3ZPA8_BRAFL
Length = 1867
Score = 63.5 bits (153), Expect = 7e-09
Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 16/148 (10%)
Frame = -1
Query: 462 DLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTG---NLQNRASYLQRD 292
D +L GF++++E A + +Y M ++M YG +E E+++G ++ R L+
Sbjct: 970 DHDLVREGFDSYIEDAQTQLNIYNNMMMSIMSLYGITSEGEVVSGCILKVKQRLGLLK-- 1027
Query: 291 NRRYTDMKDRILISVKDLQREAK---------EWFEADCQQHEYQAMASAWYHVTYHPKY 139
N R+ ++ + + K L R+ + E + ++ E ASAWY VTY Y
Sbjct: 1028 NERF-EVTEYVRARFKTLWRKTRAEFFKQFDVEELSEERRKEEQLKRASAWYMVTYSDAY 1086
Query: 138 ----YHESSSFLSFPWIVGDILLHIKSV 67
+ S LSFPW+V D+L +K +
Sbjct: 1087 DEKPHDPSPKLLSFPWVVYDVLASLKKI 1114
[70][TOP]
>UniRef100_C3Z737 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3Z737_BRAFL
Length = 1492
Score = 63.2 bits (152), Expect = 9e-09
Identities = 46/132 (34%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Frame = -1
Query: 435 EAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNRRYTDMKDRIL 256
+ + A + Y +++ LM YG ETE E ++G + ++ DNR +R+
Sbjct: 1067 QRYKRQAEQSRGRYNDQLKYLMDRYGIETEAEAMSGCIGRIHKHM--DNRYDRHEVERVF 1124
Query: 255 IS-VKDLQREAKEWF------EADCQQHEY----QAMASAWYHVTYHPKYYHESSSFLSF 109
+KDL+R +E F E + ++ +Y QA ASAWY VTY + LSF
Sbjct: 1125 KERIKDLRRRTREEFFVEFGGEKNVKKSDYPPEVQAKASAWYVVTYSDA---NENRLLSF 1181
Query: 108 PWIVGDILLHIK 73
PWIVGDIL IK
Sbjct: 1182 PWIVGDILAVIK 1193
[71][TOP]
>UniRef100_Q71BB5 RNA-directed RNA polymerase-like protein n=1 Tax=Branchiostoma
floridae RepID=Q71BB5_BRAFL
Length = 1005
Score = 61.6 bits (148), Expect = 3e-08
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 14/146 (9%)
Frame = -1
Query: 462 DLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTG---NLQNRASYLQRD 292
D +L GF++++E A + +Y M ++M YG +E E+++G ++ R L+
Sbjct: 850 DHDLVREGFDSYIEDAQTQLNIYNNMMMSIMSLYGITSEGEVVSGCILKVKQRLGLLK-- 907
Query: 291 NRRYTDMKDRILISVKDLQREAK---------EWFEADCQQHEYQAMASAWYHVTYHP-- 145
N R+ ++ + + K L R+ + E + ++ E ASAWY VTY
Sbjct: 908 NERF-EVAEYVRARFKTLWRKTRAEFFKQFDVEELSEERRKEEQLKKASAWYMVTYSDAN 966
Query: 144 KYYHESSSFLSFPWIVGDILLHIKSV 67
K S LSFPW+V D+L +K +
Sbjct: 967 KPLDPSPKLLSFPWVVYDVLASLKKI 992
[72][TOP]
>UniRef100_B5BLP6 RNA-dependent RNA polymerase 6 n=1 Tax=Nicotiana tabacum
RepID=B5BLP6_TOBAC
Length = 1197
Score = 60.5 bits (145), Expect = 6e-08
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
YD L G F++ A + K Y ++ L+ Y E+E++TG++ + Y +
Sbjct: 1023 YDTTLVIPGSTVFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKY---SAK 1079
Query: 285 RYTDMKDRILISVKDLQREAKEWFEA----------DCQQHEYQAMASAWYHVTYHPKYY 136
+ ++K+R+ + L++E + FE D + Y+ ASAWY VTY+P +
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYNPHWV 1139
Query: 135 H-----------ESSSFLSFPWIVGDILLHIK 73
S+ LSF WI D L IK
Sbjct: 1140 ARSLELQLPDAISSTVMLSFAWIAADYLARIK 1171
[73][TOP]
>UniRef100_A9U458 RNA-directed RNA polymerase (Fragment) n=2 Tax=Physcomitrella patens
subsp. patens RepID=A9U458_PHYPA
Length = 1049
Score = 59.3 bits (142), Expect = 1e-07
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 30/164 (18%)
Frame = -1
Query: 474 EDAYDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQR 295
+ YD +L+ G+E +L+ A + K Y ++ +M + + E L+ L+ + L+
Sbjct: 885 DSIYDYDLQVPGYEVYLDDAWTKKISYDRQLRCMMTHFNVQREAALIASWLKRGSPGLRS 944
Query: 294 DNRR------------YTDMKDRILISVKDLQRE--AKEWFEADCQQ----HEYQAMASA 169
NR Y + + + K L + +++ E+ + ++ A ASA
Sbjct: 945 VNRNRGDAFAQSYGVLYEEFRAQFEGLKKGLDPDGYSEDMVESSSSEIKGPTDFAAKASA 1004
Query: 168 WYHVTYHPKYYH----------ESS--SFLSFPWIVGDILLHIK 73
WYHVTYHP++ ESS LSFPWI +L +IK
Sbjct: 1005 WYHVTYHPEWKQKALEIFENSGESSPRPLLSFPWITASVLSNIK 1048
[74][TOP]
>UniRef100_UPI0001868CE3 hypothetical protein BRAFLDRAFT_101874 n=1 Tax=Branchiostoma floridae
RepID=UPI0001868CE3
Length = 1415
Score = 58.9 bits (141), Expect = 2e-07
Identities = 35/139 (25%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Frame = -1
Query: 462 DLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNRR 283
D L ++++ A ++ Y +++ +LM YG ETE E ++G + +++ + R
Sbjct: 977 DCGLVVGEHVSYVKKARRSRDRYNDQLRSLMAQYGIETEAEAVSGCIVKLHKHMEDRHER 1036
Query: 282 YTDMKDRILISVKDLQREAKEWF--------EADCQQHEYQAMASAWYHVTYHPKYYHES 127
Y +++ + ++DL++ ++ F + ASAWY VTY
Sbjct: 1037 Y-EIERVAKVRIEDLRKRTRQDFFEEFGGEESVELDHPHVLGKASAWYTVTYS----DPD 1091
Query: 126 SSFLSFPWIVGDILLHIKS 70
+ LSFPW++GD+L +K+
Sbjct: 1092 AKLLSFPWVIGDVLGILKT 1110
[75][TOP]
>UniRef100_Q647I5 Putative RNA-dependent RNA polymerase SDE1 n=1 Tax=Nicotiana
benthamiana RepID=Q647I5_NICBE
Length = 1197
Score = 58.2 bits (139), Expect = 3e-07
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 21/151 (13%)
Frame = -1
Query: 465 YDLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNR 286
YD +LE G F+ A + K Y ++ L+ Y E+E++TG++ + Y +
Sbjct: 1023 YDSSLEIPGSTVFMGDAWNCKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKY---SAK 1079
Query: 285 RYTDMKDRILISVKDLQREAKEWFEA----------DCQQHEYQAMASAWYHVTYHPKYY 136
+ ++K+R+ + L++E + FE D + Y+ ASAWY VTY+P +
Sbjct: 1080 KQGELKERLKHAYNMLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYNPHWV 1139
Query: 135 H-----------ESSSFLSFPWIVGDILLHI 76
S+ LSF WI D L I
Sbjct: 1140 ARSLELQLPDAVSSTVMLSFAWIAADYLARI 1170
[76][TOP]
>UniRef100_C3Z728 Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma
floridae RepID=C3Z728_BRAFL
Length = 1207
Score = 57.4 bits (137), Expect = 5e-07
Identities = 37/144 (25%), Positives = 70/144 (48%), Gaps = 10/144 (6%)
Frame = -1
Query: 462 DLNLEANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNRR 283
D L ++++ A ++ Y +++ +LM YG ETE E ++G + ++ R
Sbjct: 841 DYGLVIGEHVSYVKKARRSRDRYNDQLRSLMAQYGIETESEAVSGCIVKLHKHMDDRYER 900
Query: 282 YTDMKDRILISVKDLQREAKEWF--------EADCQQHEYQAMASAWYHVTYHPKYYHES 127
Y +++ + ++DL++ ++ F + ASAWY VTY
Sbjct: 901 Y-EIERVAKVRIEDLRKRTRQDFFEEFGGEESVELDHPHVLKKASAWYTVTYS----DPD 955
Query: 126 SSFLSFPWIVGDIL--LHIKSVNS 61
+ LSFPW++GDIL L++K+ +
Sbjct: 956 AKLLSFPWVIGDILGILNLKTATT 979
[77][TOP]
>UniRef100_UPI0001868BE6 hypothetical protein BRAFLDRAFT_101867 n=1 Tax=Branchiostoma floridae
RepID=UPI0001868BE6
Length = 1395
Score = 53.9 bits (128), Expect = 5e-06
Identities = 41/106 (38%), Positives = 56/106 (52%), Gaps = 11/106 (10%)
Frame = -1
Query: 357 AETEDELLTGNLQNRASYLQRDNRRYTDMKDRILIS-VKDLQREAKEWF------EADCQ 199
AETE E ++G + ++ DNR +R+ +KDL+R +E F E + +
Sbjct: 982 AETEAEAMSGCIGRIHKHM--DNRYDRHEVERVFKERIKDLRRRTREEFFVEFGGEKNVK 1039
Query: 198 QHEY----QAMASAWYHVTYHPKYYHESSSFLSFPWIVGDILLHIK 73
+ +Y QA ASAWY VTY + LSFPWIVGDIL IK
Sbjct: 1040 KSDYPPEVQAKASAWYVVTYSGA---NENRLLSFPWIVGDILAVIK 1082
[78][TOP]
>UniRef100_B7PCS8 RNA-dependent RNA polymerase, putative (Fragment) n=1 Tax=Ixodes
scapularis RepID=B7PCS8_IXOSC
Length = 632
Score = 53.5 bits (127), Expect = 7e-06
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 18/151 (11%)
Frame = -1
Query: 450 EANGFEAFLETASSHKEMYAEKMTALMKFYGAETEDELLTGNLQNRASYLQRDNRRYTD- 274
E G+ E+A + +Y +M +++ +G +TE E+++G + + + Y N+ TD
Sbjct: 226 EYPGWRDHEESAQTALAVYGSRMEQILRQHGIKTEGEVVSGIINSVSDY----NKSKTDK 281
Query: 273 --MKDRILISVKDLQREAKEWF----EADCQQHEYQA----------MASAWYHVTYHPK 142
++ + +DL + +E F +A CQ + +ASAWY VTY
Sbjct: 282 ASVEALVEKQYRDLVKSTREQFFRDVDAACQSLKVPTEAGKLTVLLQVASAWYMVTYAGV 341
Query: 141 YYHESSSFLSFPWIVGDILLHI-KSVNSKVL 52
+ + S+ SFPW V D+LL + K VN+ L
Sbjct: 342 W--QESNCYSFPWSVSDVLLLVMKQVNASEL 370