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[1][TOP]
>UniRef100_UPI000198388B PREDICTED: similar to SIGB (SIGMA FACTOR B); DNA binding /
DNA-directed RNA polymerase/ transcription factor n=1
Tax=Vitis vinifera RepID=UPI000198388B
Length = 578
Score = 102 bits (255), Expect(2) = 1e-20
Identities = 47/56 (83%), Positives = 54/56 (96%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRRET 70
+SLNPREKQVIRWR+G++DGR KTLQEIGE++GVSRERIRQIESCAFRKLKN+R T
Sbjct: 514 NSLNPREKQVIRWRYGLEDGRTKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRT 569
Score = 20.8 bits (42), Expect(2) = 1e-20
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1
Query: 71 QHLQQYLVS 45
+HLQQYLVS
Sbjct: 570 KHLQQYLVS 578
[2][TOP]
>UniRef100_A7PSL8 Chromosome chr6 scaffold_28, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PSL8_VITVI
Length = 235
Score = 102 bits (255), Expect(2) = 1e-20
Identities = 47/56 (83%), Positives = 54/56 (96%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRRET 70
+SLNPREKQVIRWR+G++DGR KTLQEIGE++GVSRERIRQIESCAFRKLKN+R T
Sbjct: 171 NSLNPREKQVIRWRYGLEDGRTKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRT 226
Score = 20.8 bits (42), Expect(2) = 1e-20
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1
Query: 71 QHLQQYLVS 45
+HLQQYLVS
Sbjct: 227 KHLQQYLVS 235
[3][TOP]
>UniRef100_Q8GWC1 Putative plastid RNA polymerase sigma-subunit SIG1 n=1
Tax=Arabidopsis thaliana RepID=Q8GWC1_ARATH
Length = 572
Score = 97.8 bits (242), Expect = 3e-19
Identities = 46/54 (85%), Positives = 51/54 (94%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRR 76
DSL REKQVIRWRFGM+DGRMKTLQEIGEM+GVSRER+RQIES AFRKLKN++
Sbjct: 506 DSLGTREKQVIRWRFGMEDGRMKTLQEIGEMMGVSRERVRQIESSAFRKLKNKK 559
[4][TOP]
>UniRef100_O22455 Sigma factor 2 n=1 Tax=Arabidopsis thaliana RepID=O22455_ARATH
Length = 574
Score = 97.8 bits (242), Expect = 3e-19
Identities = 46/54 (85%), Positives = 51/54 (94%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRR 76
DSL REKQVIRWRFGM+DGRMKTLQEIGEM+GVSRER+RQIES AFRKLKN++
Sbjct: 508 DSLGTREKQVIRWRFGMEDGRMKTLQEIGEMMGVSRERVRQIESSAFRKLKNKK 561
[5][TOP]
>UniRef100_O22056 F22O13.2 n=1 Tax=Arabidopsis thaliana RepID=O22056_ARATH
Length = 572
Score = 97.8 bits (242), Expect = 3e-19
Identities = 46/54 (85%), Positives = 51/54 (94%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRR 76
DSL REKQVIRWRFGM+DGRMKTLQEIGEM+GVSRER+RQIES AFRKLKN++
Sbjct: 506 DSLGTREKQVIRWRFGMEDGRMKTLQEIGEMMGVSRERVRQIESSAFRKLKNKK 559
[6][TOP]
>UniRef100_B9SDA3 RNA polymerase sigma factor rpoD1, putative n=1 Tax=Ricinus
communis RepID=B9SDA3_RICCO
Length = 569
Score = 97.1 bits (240), Expect = 6e-19
Identities = 44/56 (78%), Positives = 53/56 (94%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRRET 70
++LNPRE QV+RWRFG++DGRMKTLQEIGE++GVSRERIRQIES AFRKLKN++ T
Sbjct: 505 NTLNPRETQVVRWRFGLEDGRMKTLQEIGEIMGVSRERIRQIESSAFRKLKNKKRT 560
[7][TOP]
>UniRef100_Q710C3 Sigma factor n=1 Tax=Spinacia oleracea RepID=Q710C3_SPIOL
Length = 575
Score = 95.9 bits (237), Expect = 1e-18
Identities = 44/56 (78%), Positives = 54/56 (96%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRRET 70
D+L+ REKQVIRWRFG++DGRMKTLQEIGE++GVSRERIRQIES AFRKL+N+++T
Sbjct: 511 DTLSSREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLQNKKKT 566
[8][TOP]
>UniRef100_B9IPZ1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IPZ1_POPTR
Length = 564
Score = 95.9 bits (237), Expect = 1e-18
Identities = 45/56 (80%), Positives = 51/56 (91%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRRET 70
+SL+PRE QVIRWRFGM+DGRMKTLQEIGE++GVSRERIRQIE AFRKLKN+ T
Sbjct: 500 ESLSPRENQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIELSAFRKLKNKNRT 555
[9][TOP]
>UniRef100_B9I6F1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I6F1_POPTR
Length = 567
Score = 94.4 bits (233), Expect = 4e-18
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRRET 70
SL+PRE QV+RWRFGM+DGRMKTLQEIGE++GVSRER+RQIE AFRKLKN+ T
Sbjct: 504 SLSPRENQVVRWRFGMEDGRMKTLQEIGELMGVSRERVRQIELSAFRKLKNKNRT 558
[10][TOP]
>UniRef100_Q9MTH3 Sigma factor 2 n=1 Tax=Sinapis alba RepID=Q9MTH3_SINAL
Length = 575
Score = 94.0 bits (232), Expect = 5e-18
Identities = 43/57 (75%), Positives = 52/57 (91%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRRETA 67
DSL+ REKQVIRWRFGM+DGRMKTLQEIGE +GVSRER+RQI++ AFRKLKN++ +
Sbjct: 506 DSLSTREKQVIRWRFGMEDGRMKTLQEIGETMGVSRERVRQIDTSAFRKLKNKKRNS 562
[11][TOP]
>UniRef100_Q84Q84 Os03g0271100 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q84Q84_ORYSJ
Length = 540
Score = 84.3 bits (207), Expect = 4e-15
Identities = 38/55 (69%), Positives = 49/55 (89%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRRE 73
D L+PRE+QVIR+RFGMDDGR++TL +IG ++GVSRERIRQIE AFRKL+ R++
Sbjct: 472 DGLSPRERQVIRYRFGMDDGRLRTLHDIGRLMGVSRERIRQIELVAFRKLRGRKK 526
[12][TOP]
>UniRef100_Q10NF3 cDNA clone:J013116E16, full insert sequence n=1 Tax=Oryza sativa
Japonica Group RepID=Q10NF3_ORYSJ
Length = 343
Score = 84.3 bits (207), Expect = 4e-15
Identities = 38/55 (69%), Positives = 49/55 (89%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRRE 73
D L+PRE+QVIR+RFGMDDGR++TL +IG ++GVSRERIRQIE AFRKL+ R++
Sbjct: 275 DGLSPRERQVIRYRFGMDDGRLRTLHDIGRLMGVSRERIRQIELVAFRKLRGRKK 329
[13][TOP]
>UniRef100_A3AGH1 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=A3AGH1_ORYSJ
Length = 497
Score = 84.3 bits (207), Expect = 4e-15
Identities = 38/55 (69%), Positives = 49/55 (89%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRRE 73
D L+PRE+QVIR+RFGMDDGR++TL +IG ++GVSRERIRQIE AFRKL+ R++
Sbjct: 429 DGLSPRERQVIRYRFGMDDGRLRTLHDIGRLMGVSRERIRQIELVAFRKLRGRKK 483
[14][TOP]
>UniRef100_A2XF08 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2XF08_ORYSI
Length = 540
Score = 84.3 bits (207), Expect = 4e-15
Identities = 38/55 (69%), Positives = 49/55 (89%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRRE 73
D L+PRE+QVIR+RFGMDDGR++TL +IG ++GVSRERIRQIE AFRKL+ R++
Sbjct: 472 DGLSPRERQVIRYRFGMDDGRLRTLHDIGRLMGVSRERIRQIELVAFRKLRGRKK 526
[15][TOP]
>UniRef100_Q9ZPL2 Sigma factor SIG2A n=1 Tax=Zea mays RepID=Q9ZPL2_MAIZE
Length = 539
Score = 77.8 bits (190), Expect = 4e-13
Identities = 36/55 (65%), Positives = 49/55 (89%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRRE 73
D+L REKQV+ RFG++DGR++TLQEIG ++GVSRERIRQIES AFRKL+++++
Sbjct: 471 DTLTTREKQVVVLRFGLEDGRIRTLQEIGNIMGVSRERIRQIESGAFRKLRSKKK 525
[16][TOP]
>UniRef100_Q7XXT0 Plastid sigma factor 2A n=1 Tax=Oryza sativa Japonica Group
RepID=Q7XXT0_ORYSJ
Length = 564
Score = 77.4 bits (189), Expect = 5e-13
Identities = 35/54 (64%), Positives = 47/54 (87%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRR 76
D+L RE+QV+ RFG++DGR++TLQEIG +GVSRERIRQIES AFRKL++++
Sbjct: 496 DTLTTRERQVVTLRFGLEDGRIRTLQEIGNTMGVSRERIRQIESAAFRKLRSKK 549
[17][TOP]
>UniRef100_Q53KH8 Os11g0448400 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q53KH8_ORYSJ
Length = 564
Score = 77.4 bits (189), Expect = 5e-13
Identities = 35/54 (64%), Positives = 47/54 (87%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRR 76
D+L RE+QV+ RFG++DGR++TLQEIG +GVSRERIRQIES AFRKL++++
Sbjct: 496 DTLTTRERQVVTLRFGLEDGRIRTLQEIGNTMGVSRERIRQIESAAFRKLRSKK 549
[18][TOP]
>UniRef100_Q53JE7 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=Q53JE7_ORYSJ
Length = 563
Score = 77.4 bits (189), Expect = 5e-13
Identities = 35/54 (64%), Positives = 47/54 (87%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRR 76
D+L RE+QV+ RFG++DGR++TLQEIG +GVSRERIRQIES AFRKL++++
Sbjct: 496 DTLTTRERQVVTLRFGLEDGRIRTLQEIGNTMGVSRERIRQIESAAFRKLRSKK 549
[19][TOP]
>UniRef100_B8AUZ3 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8AUZ3_ORYSI
Length = 563
Score = 77.4 bits (189), Expect = 5e-13
Identities = 35/54 (64%), Positives = 47/54 (87%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRR 76
D+L RE+QV+ RFG++DGR++TLQEIG +GVSRERIRQIES AFRKL++++
Sbjct: 495 DTLTTRERQVVTLRFGLEDGRIRTLQEIGNTMGVSRERIRQIESAAFRKLRSKK 548
[20][TOP]
>UniRef100_Q9ZPL1 Sigma factor SIG2B n=1 Tax=Zea mays RepID=Q9ZPL1_MAIZE
Length = 527
Score = 75.5 bits (184), Expect = 2e-12
Identities = 34/53 (64%), Positives = 48/53 (90%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNR 79
DSL+PR+KQV+R+RFG++ GR +TL +IG+++GVSRERIRQIE AFRKL+++
Sbjct: 459 DSLSPRKKQVMRYRFGIEGGRARTLHDIGQLMGVSRERIRQIELGAFRKLRSK 511
[21][TOP]
>UniRef100_Q9L4T2 RNA polymerase sigma factor n=1 Tax=Nostoc punctiforme PCC 73102
RepID=Q9L4T2_NOSP7
Length = 389
Score = 75.1 bits (183), Expect = 2e-12
Identities = 34/52 (65%), Positives = 46/52 (88%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
DSL+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 326 DSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 377
[22][TOP]
>UniRef100_A0ZJC3 RNA polymerase sigma factor n=1 Tax=Nodularia spumigena CCY9414
RepID=A0ZJC3_NODSP
Length = 391
Score = 75.1 bits (183), Expect = 2e-12
Identities = 34/52 (65%), Positives = 46/52 (88%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
DSL+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 328 DSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 379
[23][TOP]
>UniRef100_P26683 RNA polymerase sigma factor rpoD n=2 Tax=Nostocaceae
RepID=RPOD_ANASP
Length = 390
Score = 75.1 bits (183), Expect = 2e-12
Identities = 34/52 (65%), Positives = 46/52 (88%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
DSL+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 327 DSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 378
[24][TOP]
>UniRef100_C6JRK5 Putative uncharacterized protein Sb0010s016080 n=1 Tax=Sorghum
bicolor RepID=C6JRK5_SORBI
Length = 238
Score = 74.7 bits (182), Expect = 3e-12
Identities = 35/54 (64%), Positives = 47/54 (87%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRR 76
D+L REKQV+ RFG++D R++TLQEIG ++GVSRERIRQIES AFRKL++++
Sbjct: 170 DTLTTREKQVVVLRFGLEDDRIRTLQEIGNIMGVSRERIRQIESGAFRKLRSKK 223
[25][TOP]
>UniRef100_B7KDV7 RNA polymerase sigma factor n=1 Tax=Cyanothece sp. PCC 7424
RepID=B7KDV7_CYAP7
Length = 376
Score = 73.9 bits (180), Expect = 5e-12
Identities = 33/52 (63%), Positives = 46/52 (88%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 313 DTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 364
[26][TOP]
>UniRef100_B1WS32 RNA polymerase sigma factor n=1 Tax=Cyanothece sp. ATCC 51142
RepID=B1WS32_CYAA5
Length = 416
Score = 73.9 bits (180), Expect = 5e-12
Identities = 33/52 (63%), Positives = 46/52 (88%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 353 DTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 404
[27][TOP]
>UniRef100_B0JGK3 RNA polymerase sigma factor n=1 Tax=Microcystis aeruginosa NIES-843
RepID=B0JGK3_MICAN
Length = 416
Score = 73.9 bits (180), Expect = 5e-12
Identities = 33/52 (63%), Positives = 46/52 (88%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 353 DTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 404
[28][TOP]
>UniRef100_Q4C7J7 RNA polymerase sigma factor n=1 Tax=Crocosphaera watsonii WH 8501
RepID=Q4C7J7_CROWT
Length = 414
Score = 73.9 bits (180), Expect = 5e-12
Identities = 33/52 (63%), Positives = 46/52 (88%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 351 DTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 402
[29][TOP]
>UniRef100_C7QR23 RNA polymerase, sigma 70 subunit, RpoD subfamily n=2 Tax=Cyanothece
RepID=C7QR23_CYAP0
Length = 379
Score = 73.9 bits (180), Expect = 5e-12
Identities = 33/52 (63%), Positives = 46/52 (88%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 316 DTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 367
[30][TOP]
>UniRef100_B5VWQ7 RNA polymerase sigma factor n=1 Tax=Arthrospira maxima CS-328
RepID=B5VWQ7_SPIMA
Length = 387
Score = 73.9 bits (180), Expect = 5e-12
Identities = 33/52 (63%), Positives = 46/52 (88%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 324 DTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 375
[31][TOP]
>UniRef100_B4W0Y8 RNA polymerase sigma factor n=1 Tax=Microcoleus chthonoplastes PCC
7420 RepID=B4W0Y8_9CYAN
Length = 380
Score = 73.9 bits (180), Expect = 5e-12
Identities = 33/52 (63%), Positives = 46/52 (88%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 317 DTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 368
[32][TOP]
>UniRef100_B4AUJ5 RNA polymerase sigma factor n=1 Tax=Cyanothece sp. PCC 7822
RepID=B4AUJ5_9CHRO
Length = 377
Score = 73.9 bits (180), Expect = 5e-12
Identities = 33/52 (63%), Positives = 46/52 (88%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 314 DTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 365
[33][TOP]
>UniRef100_B1PVV9 RNA polymerase sigma factor n=1 Tax=Microcystis aeruginosa PCC 7820
RepID=B1PVV9_MICAE
Length = 416
Score = 73.9 bits (180), Expect = 5e-12
Identities = 33/52 (63%), Positives = 46/52 (88%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 353 DTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 404
[34][TOP]
>UniRef100_A8YBI5 RNA polymerase sigma factor n=1 Tax=Microcystis aeruginosa PCC 7806
RepID=A8YBI5_MICAE
Length = 416
Score = 73.9 bits (180), Expect = 5e-12
Identities = 33/52 (63%), Positives = 46/52 (88%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 353 DTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 404
[35][TOP]
>UniRef100_A3ISY9 RNA polymerase sigma factor n=1 Tax=Cyanothece sp. CCY0110
RepID=A3ISY9_9CHRO
Length = 416
Score = 73.9 bits (180), Expect = 5e-12
Identities = 33/52 (63%), Positives = 46/52 (88%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 353 DTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 404
[36][TOP]
>UniRef100_A0YTZ3 RNA polymerase sigma factor n=1 Tax=Lyngbya sp. PCC 8106
RepID=A0YTZ3_9CYAN
Length = 391
Score = 73.9 bits (180), Expect = 5e-12
Identities = 33/52 (63%), Positives = 46/52 (88%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 328 DTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 379
[37][TOP]
>UniRef100_P74565 RNA polymerase sigma factor rpoD n=1 Tax=Synechocystis sp. PCC 6803
RepID=RPOD_SYNY3
Length = 425
Score = 73.9 bits (180), Expect = 5e-12
Identities = 33/52 (63%), Positives = 46/52 (88%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 362 DTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 413
[38][TOP]
>UniRef100_P52322 RNA polymerase sigma factor rpoD1 n=1 Tax=Microcystis aeruginosa
RepID=RPOD_MICAE
Length = 416
Score = 73.9 bits (180), Expect = 5e-12
Identities = 33/52 (63%), Positives = 46/52 (88%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 353 DTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 404
[39][TOP]
>UniRef100_Q10UV2 RNA polymerase sigma factor n=1 Tax=Trichodesmium erythraeum IMS101
RepID=Q10UV2_TRIEI
Length = 386
Score = 73.2 bits (178), Expect = 9e-12
Identities = 33/52 (63%), Positives = 46/52 (88%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+SL+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 323 NSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 374
[40][TOP]
>UniRef100_Q67RX0 RNA polymerase sigma factor n=1 Tax=Symbiobacterium thermophilum
RepID=Q67RX0_SYMTH
Length = 388
Score = 72.8 bits (177), Expect = 1e-11
Identities = 32/52 (61%), Positives = 46/52 (88%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+SL PRE++V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 325 ESLTPREEKVLRLRFGLDDGRARTLEEVGQVFGVTRERIRQIEAKALRKLRH 376
[41][TOP]
>UniRef100_Q2RKT5 RNA polymerase sigma factor n=1 Tax=Moorella thermoacetica ATCC
39073 RepID=Q2RKT5_MOOTA
Length = 361
Score = 72.8 bits (177), Expect = 1e-11
Identities = 33/52 (63%), Positives = 45/52 (86%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+SL PREK+V+R RFG+DDGR +TL+E+G+ GV+RERIRQIE+ A RKL++
Sbjct: 298 NSLTPREKRVLRLRFGLDDGRARTLEEVGQEFGVTRERIRQIEAKALRKLRH 349
[42][TOP]
>UniRef100_B0CDC4 RNA polymerase sigma factor n=1 Tax=Acaryochloris marina MBIC11017
RepID=B0CDC4_ACAM1
Length = 371
Score = 72.8 bits (177), Expect = 1e-11
Identities = 32/52 (61%), Positives = 46/52 (88%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L+PRE+ V++ R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 308 DTLSPRERDVLKLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 359
[43][TOP]
>UniRef100_C5WQ19 Putative uncharacterized protein Sb01g039810 n=1 Tax=Sorghum
bicolor RepID=C5WQ19_SORBI
Length = 528
Score = 72.8 bits (177), Expect = 1e-11
Identities = 33/54 (61%), Positives = 48/54 (88%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRR 76
+SL+PREK V+R+RFG++ GR +TL +IG+++GVSRERIRQIE AFRKL++++
Sbjct: 460 ESLSPREKLVMRYRFGIEGGRPRTLHDIGQIMGVSRERIRQIELGAFRKLRSKK 513
[44][TOP]
>UniRef100_Q7NHG5 RNA polymerase sigma factor n=1 Tax=Gloeobacter violaceus
RepID=Q7NHG5_GLOVI
Length = 400
Score = 72.4 bits (176), Expect = 1e-11
Identities = 32/52 (61%), Positives = 46/52 (88%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
++L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 337 NTLSPRERDVLRLRYGLDDGRMKTLEEIGQLFNVTRERIRQIEAKALRKLRH 388
[45][TOP]
>UniRef100_Q5N3Q1 RNA polymerase sigma factor n=1 Tax=Synechococcus elongatus PCC
6301 RepID=Q5N3Q1_SYNP6
Length = 399
Score = 72.0 bits (175), Expect = 2e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 337 TLSPRERDVLRLRYGLDDGRMKTLEEIGQLFNVTRERIRQIEAKALRKLRH 387
[46][TOP]
>UniRef100_C9KNX0 RNA polymerase sigma factor RpoD n=1 Tax=Mitsuokella multacida DSM
20544 RepID=C9KNX0_9FIRM
Length = 373
Score = 72.0 bits (175), Expect = 2e-11
Identities = 32/52 (61%), Positives = 45/52 (86%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ GV+RERIRQIE+ A RKL++
Sbjct: 310 DTLTPREEKVLRLRFGLDDGRARTLEEVGQNFGVTRERIRQIEAKALRKLRH 361
[47][TOP]
>UniRef100_Q017N3 SigA (ISS) n=1 Tax=Ostreococcus tauri RepID=Q017N3_OSTTA
Length = 525
Score = 72.0 bits (175), Expect = 2e-11
Identities = 33/51 (64%), Positives = 44/51 (86%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLK 85
++LNPRE+ V+R R+G+DDGR+KTL+EIG + V+RERIRQIE+ A RKLK
Sbjct: 452 NTLNPRERDVLRLRYGLDDGRVKTLEEIGTVFSVTRERIRQIEAKALRKLK 502
[48][TOP]
>UniRef100_A9RXT3 Plastid sigma facor SIG2 n=2 Tax=Physcomitrella patens
RepID=A9RXT3_PHYPA
Length = 579
Score = 72.0 bits (175), Expect = 2e-11
Identities = 33/50 (66%), Positives = 44/50 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLK 85
+LNPRE++V+R RFG+DDGR KTL+EIG++ V+RERIRQIE+ A RKL+
Sbjct: 511 TLNPREREVLRLRFGLDDGRSKTLEEIGQIFKVTRERIRQIEAKAMRKLR 560
[49][TOP]
>UniRef100_A4RYI5 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4RYI5_OSTLU
Length = 344
Score = 72.0 bits (175), Expect = 2e-11
Identities = 33/51 (64%), Positives = 44/51 (86%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLK 85
++LNPRE+ V+R R+G+DDGR+KTL+EIG + V+RERIRQIE+ A RKLK
Sbjct: 266 NTLNPRERDVLRLRYGLDDGRVKTLEEIGTVFSVTRERIRQIEAKALRKLK 316
[50][TOP]
>UniRef100_P38023 RNA polymerase sigma factor rpoD1 n=1 Tax=Synechococcus elongatus
PCC 7942 RepID=RPOD1_SYNE7
Length = 399
Score = 72.0 bits (175), Expect = 2e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 337 TLSPRERDVLRLRYGLDDGRMKTLEEIGQLFNVTRERIRQIEAKALRKLRH 387
[51][TOP]
>UniRef100_B2A1Z3 RNA polymerase sigma factor n=1 Tax=Natranaerobius thermophilus
JW/NM-WN-LF RepID=B2A1Z3_NATTJ
Length = 360
Score = 71.6 bits (174), Expect = 3e-11
Identities = 32/52 (61%), Positives = 45/52 (86%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
DSL PRE++V+R RFG+DDG+ +TL+E+G+ GV+RERIRQIE+ A RKL++
Sbjct: 297 DSLTPREQKVLRLRFGLDDGKTRTLEEVGKHFGVTRERIRQIEAKALRKLRH 348
[52][TOP]
>UniRef100_B4WPM0 RNA polymerase sigma factor n=1 Tax=Synechococcus sp. PCC 7335
RepID=B4WPM0_9SYNE
Length = 404
Score = 71.6 bits (174), Expect = 3e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 342 TLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 392
[53][TOP]
>UniRef100_Q98RZ3 RNA-polymerase sigma factor n=1 Tax=Guillardia theta
RepID=Q98RZ3_GUITH
Length = 460
Score = 71.6 bits (174), Expect = 3e-11
Identities = 31/51 (60%), Positives = 45/51 (88%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLK 85
+SL+PRE+ V+R R+G+DDGR+KTL+EIG++ V+RER+RQIE+ A RKL+
Sbjct: 362 NSLSPRERDVVRMRYGLDDGRIKTLEEIGQIFSVTRERVRQIEAKAIRKLR 412
[54][TOP]
>UniRef100_Q8S9D0 RNA polymerase sigma factor n=1 Tax=Guillardia theta
RepID=Q8S9D0_GUITH
Length = 490
Score = 71.6 bits (174), Expect = 3e-11
Identities = 31/51 (60%), Positives = 45/51 (88%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLK 85
+SL+PRE+ V+R R+G+DDGR+KTL+EIG++ V+RER+RQIE+ A RKL+
Sbjct: 379 NSLSPRERDVVRMRYGLDDGRIKTLEEIGQIFSVTRERVRQIEAKAIRKLR 429
[55][TOP]
>UniRef100_B8LQB0 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LQB0_PICSI
Length = 495
Score = 71.6 bits (174), Expect = 3e-11
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRRET 70
D+L REKQV+R R+G+DDGRMK+L E+GE +SRER+RQIE A RKL+ T
Sbjct: 431 DTLTAREKQVVRLRYGLDDGRMKSLHEVGENFSLSRERVRQIEMKAMRKLRQNHRT 486
[56][TOP]
>UniRef100_B8LLW6 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LLW6_PICSI
Length = 592
Score = 71.6 bits (174), Expect = 3e-11
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRRET 70
D+L REKQV+R R+G+DDGRMK+L E+GE +SRER+RQIE A RKL+ T
Sbjct: 528 DTLTAREKQVVRLRYGLDDGRMKSLHEVGENFSLSRERVRQIEMKAMRKLRQNHRT 583
[57][TOP]
>UniRef100_A9BK56 RpoD n=1 Tax=Cryptophyta RepID=A9BK56_9CRYP
Length = 485
Score = 71.6 bits (174), Expect = 3e-11
Identities = 31/51 (60%), Positives = 45/51 (88%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLK 85
+SL+PRE+ V+R R+G+DDGR+KTL+EIG++ V+RER+RQIE+ A RKL+
Sbjct: 379 NSLSPRERDVVRMRYGLDDGRIKTLEEIGQIFSVTRERVRQIEAKAIRKLR 429
[58][TOP]
>UniRef100_Q7VD88 RNA polymerase sigma factor n=1 Tax=Prochlorococcus marinus
RepID=Q7VD88_PROMA
Length = 438
Score = 71.2 bits (173), Expect = 3e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 376 TLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRH 426
[59][TOP]
>UniRef100_Q7U5C4 RNA polymerase sigma factor n=1 Tax=Synechococcus sp. WH 8102
RepID=Q7U5C4_SYNPX
Length = 471
Score = 71.2 bits (173), Expect = 3e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 409 TLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRH 459
[60][TOP]
>UniRef100_Q46GS6 RNA polymerase sigma factor n=1 Tax=Prochlorococcus marinus str.
NATL2A RepID=Q46GS6_PROMT
Length = 420
Score = 71.2 bits (173), Expect = 3e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 356 TLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRH 406
[61][TOP]
>UniRef100_Q3AWQ6 RNA polymerase sigma factor n=1 Tax=Synechococcus sp. CC9902
RepID=Q3AWQ6_SYNS9
Length = 451
Score = 71.2 bits (173), Expect = 3e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 389 TLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRH 439
[62][TOP]
>UniRef100_Q3ALS7 RNA polymerase sigma factor n=1 Tax=Synechococcus sp. CC9605
RepID=Q3ALS7_SYNSC
Length = 435
Score = 71.2 bits (173), Expect = 3e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 373 TLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRH 423
[63][TOP]
>UniRef100_Q0I8I7 RNA polymerase sigma factor n=1 Tax=Synechococcus sp. CC9311
RepID=Q0I8I7_SYNS3
Length = 440
Score = 71.2 bits (173), Expect = 3e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 378 TLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRH 428
[64][TOP]
>UniRef100_A9BEB7 RNA polymerase sigma factor n=1 Tax=Prochlorococcus marinus str.
MIT 9211 RepID=A9BEB7_PROM4
Length = 425
Score = 71.2 bits (173), Expect = 3e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 363 TLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRH 413
[65][TOP]
>UniRef100_A5GJC2 RNA polymerase sigma factor n=1 Tax=Synechococcus sp. WH 7803
RepID=A5GJC2_SYNPW
Length = 450
Score = 71.2 bits (173), Expect = 3e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 388 TLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRH 438
[66][TOP]
>UniRef100_A2C0V5 RNA polymerase sigma factor n=1 Tax=Prochlorococcus marinus str.
NATL1A RepID=A2C0V5_PROM1
Length = 420
Score = 71.2 bits (173), Expect = 3e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 356 TLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRH 406
[67][TOP]
>UniRef100_Q05YJ7 RNA polymerase sigma factor n=1 Tax=Synechococcus sp. BL107
RepID=Q05YJ7_9SYNE
Length = 451
Score = 71.2 bits (173), Expect = 3e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 389 TLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRH 439
[68][TOP]
>UniRef100_Q05RP2 RNA polymerase sigma factor n=1 Tax=Synechococcus sp. RS9916
RepID=Q05RP2_9SYNE
Length = 479
Score = 71.2 bits (173), Expect = 3e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 417 TLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRH 467
[69][TOP]
>UniRef100_D0CLH5 RNA polymerase sigma factor RpoD n=1 Tax=Synechococcus sp. WH 8109
RepID=D0CLH5_9SYNE
Length = 458
Score = 71.2 bits (173), Expect = 3e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 396 TLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRH 446
[70][TOP]
>UniRef100_C7H329 RNA polymerase sigma factor RpoD n=1 Tax=Faecalibacterium
prausnitzii A2-165 RepID=C7H329_9FIRM
Length = 461
Score = 71.2 bits (173), Expect = 3e-11
Identities = 33/53 (62%), Positives = 44/53 (83%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRR 76
SL PRE++VIR RFG+DDGR +TL+E+G GV+RER+RQIE+ A RKL +R+
Sbjct: 399 SLTPREEKVIRLRFGLDDGRPRTLEEVGRDFGVTRERVRQIEAKAIRKLHSRK 451
[71][TOP]
>UniRef100_B5ILG7 RNA polymerase sigma factor n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5ILG7_9CHRO
Length = 503
Score = 71.2 bits (173), Expect = 3e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 441 TLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRH 491
[72][TOP]
>UniRef100_B5CNX1 RNA polymerase sigma factor n=1 Tax=Ruminococcus lactaris ATCC
29176 RepID=B5CNX1_9FIRM
Length = 283
Score = 71.2 bits (173), Expect = 3e-11
Identities = 34/55 (61%), Positives = 45/55 (81%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRRE 73
++LN REKQVIR R+G++DG+ TL+EIGE L V+RER+RQIES A KL+N+ E
Sbjct: 228 NALNDREKQVIRLRYGLEDGKTHTLEEIGEELKVTRERVRQIESRAMEKLRNKAE 282
[73][TOP]
>UniRef100_A8S616 RNA polymerase sigma factor n=1 Tax=Faecalibacterium prausnitzii
M21/2 RepID=A8S616_9FIRM
Length = 457
Score = 71.2 bits (173), Expect = 3e-11
Identities = 33/53 (62%), Positives = 44/53 (83%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKNRR 76
SL PRE++VIR RFG+DDGR +TL+E+G GV+RER+RQIE+ A RKL +R+
Sbjct: 395 SLTPREEKVIRLRFGLDDGRPRTLEEVGRDFGVTRERVRQIEAKAIRKLHSRK 447
[74][TOP]
>UniRef100_A4CRY9 RNA polymerase sigma factor n=1 Tax=Synechococcus sp. WH 7805
RepID=A4CRY9_SYNPV
Length = 447
Score = 71.2 bits (173), Expect = 3e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 385 TLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRH 435
[75][TOP]
>UniRef100_A3Z5L5 RNA polymerase sigma factor n=1 Tax=Synechococcus sp. RS9917
RepID=A3Z5L5_9SYNE
Length = 456
Score = 71.2 bits (173), Expect = 3e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 394 TLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRH 444
[76][TOP]
>UniRef100_A3YZH3 RNA polymerase sigma factor n=1 Tax=Synechococcus sp. WH 5701
RepID=A3YZH3_9SYNE
Length = 469
Score = 71.2 bits (173), Expect = 3e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 407 TLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRH 457
[77][TOP]
>UniRef100_C1E4E8 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E4E8_9CHLO
Length = 595
Score = 71.2 bits (173), Expect = 3e-11
Identities = 32/51 (62%), Positives = 44/51 (86%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLK 85
++LNPRE+ V+R R+G+DDGR+KTL+EIG + V+RERIRQIE+ A RKL+
Sbjct: 522 NTLNPRERDVLRLRYGLDDGRVKTLEEIGNVFSVTRERIRQIEAKALRKLR 572
[78][TOP]
>UniRef100_B1X5Q2 RNA polymerase sigma factor n=1 Tax=Paulinella chromatophora
RepID=B1X5Q2_PAUCH
Length = 460
Score = 71.2 bits (173), Expect = 3e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 398 TLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRH 448
[79][TOP]
>UniRef100_Q8DL79 RNA polymerase sigma factor n=1 Tax=Thermosynechococcus elongatus
BP-1 RepID=Q8DL79_THEEB
Length = 418
Score = 70.9 bits (172), Expect = 4e-11
Identities = 31/51 (60%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V++ R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 356 TLSPRERDVLKLRYGLDDGRMKTLEEIGQLFNVTRERIRQIEAKALRKLRH 406
[80][TOP]
>UniRef100_Q7V698 RNA polymerase sigma factor n=1 Tax=Prochlorococcus marinus str.
MIT 9313 RepID=Q7V698_PROMM
Length = 461
Score = 70.9 bits (172), Expect = 4e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 399 TLSPRERDVLRLRYGLDDGRMKTLEEIGQIFEVTRERIRQIEAKALRKLRH 449
[81][TOP]
>UniRef100_Q7V2I0 RNA polymerase sigma factor n=1 Tax=Prochlorococcus marinus subsp.
pastoris str. CCMP1986 RepID=Q7V2I0_PROMP
Length = 396
Score = 70.9 bits (172), Expect = 4e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 334 TLSPRERDVLRLRYGIDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRH 384
[82][TOP]
>UniRef100_Q59965 RNA polymerase sigma factor n=1 Tax=Synechococcus sp. PCC 7002
RepID=Q59965_SYNP2
Length = 375
Score = 70.9 bits (172), Expect = 4e-11
Identities = 32/52 (61%), Positives = 45/52 (86%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L+ RE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 312 DTLSARERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 363
[83][TOP]
>UniRef100_Q31C37 RNA polymerase sigma factor n=1 Tax=Prochlorococcus marinus str.
MIT 9312 RepID=Q31C37_PROM9
Length = 393
Score = 70.9 bits (172), Expect = 4e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 331 TLSPRERDVLRLRYGIDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRH 381
[84][TOP]
>UniRef100_Q2JS52 RNA polymerase sigma factor n=1 Tax=Synechococcus sp. JA-3-3Ab
RepID=Q2JS52_SYNJA
Length = 404
Score = 70.9 bits (172), Expect = 4e-11
Identities = 31/52 (59%), Positives = 45/52 (86%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
++L PRE+ V++ R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 341 ETLTPRERDVLKLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 392
[85][TOP]
>UniRef100_B8HPM3 RNA polymerase sigma factor n=1 Tax=Cyanothece sp. PCC 7425
RepID=B8HPM3_CYAP4
Length = 378
Score = 70.9 bits (172), Expect = 4e-11
Identities = 31/51 (60%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V++ R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 316 TLSPRERDVLKLRYGLDDGRMKTLEEIGQLFNVTRERIRQIEAKALRKLRH 366
[86][TOP]
>UniRef100_A8G3L2 RNA polymerase sigma factor n=1 Tax=Prochlorococcus marinus str.
MIT 9215 RepID=A8G3L2_PROM2
Length = 393
Score = 70.9 bits (172), Expect = 4e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 331 TLSPRERDVLRLRYGIDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRH 381
[87][TOP]
>UniRef100_A3PBM1 RNA polymerase sigma factor n=1 Tax=Prochlorococcus marinus str.
MIT 9301 RepID=A3PBM1_PROM0
Length = 394
Score = 70.9 bits (172), Expect = 4e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 332 TLSPRERDVLRLRYGIDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRH 382
[88][TOP]
>UniRef100_A2C7M0 RNA polymerase sigma factor n=1 Tax=Prochlorococcus marinus str.
MIT 9303 RepID=A2C7M0_PROM3
Length = 444
Score = 70.9 bits (172), Expect = 4e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 382 TLSPRERDVLRLRYGLDDGRMKTLEEIGQIFEVTRERIRQIEAKALRKLRH 432
[89][TOP]
>UniRef100_A2BVF8 RNA polymerase sigma factor n=1 Tax=Prochlorococcus marinus str.
MIT 9515 RepID=A2BVF8_PROM5
Length = 397
Score = 70.9 bits (172), Expect = 4e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 335 TLSPRERDVLRLRYGIDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRH 385
[90][TOP]
>UniRef100_A2BPX8 RNA polymerase sigma factor n=1 Tax=Prochlorococcus marinus str.
AS9601 RepID=A2BPX8_PROMS
Length = 394
Score = 70.9 bits (172), Expect = 4e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 332 TLSPRERDVLRLRYGIDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRH 382
[91][TOP]
>UniRef100_B9P0P2 RNA polymerase sigma factor n=1 Tax=Prochlorococcus marinus str.
MIT 9202 RepID=B9P0P2_PROMA
Length = 393
Score = 70.9 bits (172), Expect = 4e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 331 TLSPRERDVLRLRYGIDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRH 381
[92][TOP]
>UniRef100_A1HPB3 RNA polymerase sigma factor n=1 Tax=Thermosinus carboxydivorans
Nor1 RepID=A1HPB3_9FIRM
Length = 368
Score = 70.9 bits (172), Expect = 4e-11
Identities = 31/52 (59%), Positives = 45/52 (86%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
++L PRE++V+R RFG+DDGR +TL+E+G+ GV+RERIRQIE+ A RKL++
Sbjct: 305 ETLTPREEKVLRLRFGLDDGRARTLEEVGQYFGVTRERIRQIEAKALRKLRH 356
[93][TOP]
>UniRef100_Q24T06 RNA polymerase sigma factor n=1 Tax=Desulfitobacterium hafniense
Y51 RepID=Q24T06_DESHY
Length = 367
Score = 70.5 bits (171), Expect = 6e-11
Identities = 31/52 (59%), Positives = 45/52 (86%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
++L PRE++V+R RFG+DDGR +TL+E+G+ GV+RERIRQIE+ A RKL++
Sbjct: 304 ETLTPREEKVLRLRFGLDDGRTRTLEEVGQEFGVTRERIRQIEAKALRKLRH 355
[94][TOP]
>UniRef100_B8FTY1 RNA polymerase sigma factor n=1 Tax=Desulfitobacterium hafniense
DCB-2 RepID=B8FTY1_DESHD
Length = 372
Score = 70.5 bits (171), Expect = 6e-11
Identities = 31/52 (59%), Positives = 45/52 (86%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
++L PRE++V+R RFG+DDGR +TL+E+G+ GV+RERIRQIE+ A RKL++
Sbjct: 309 ETLTPREEKVLRLRFGLDDGRTRTLEEVGQEFGVTRERIRQIEAKALRKLRH 360
[95][TOP]
>UniRef100_C1MUC7 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MUC7_9CHLO
Length = 587
Score = 70.5 bits (171), Expect = 6e-11
Identities = 32/51 (62%), Positives = 44/51 (86%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLK 85
++L+PRE+ V+R R+GMDDGR+KTL+EIG + V+RERIRQIE+ A RKL+
Sbjct: 507 NTLSPRERDVLRLRYGMDDGRVKTLEEIGNVFSVTRERIRQIEAKALRKLR 557
[96][TOP]
>UniRef100_C9R939 RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Ammonifex
degensii KC4 RepID=C9R939_9THEO
Length = 369
Score = 69.7 bits (169), Expect = 1e-10
Identities = 31/51 (60%), Positives = 43/51 (84%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
SL PRE++V+R RFG+DDGR +TL+E+G+ GV+RERIRQIE+ RKL++
Sbjct: 307 SLTPREQKVLRLRFGLDDGRARTLEEVGQKFGVTRERIRQIEAKTLRKLRH 357
[97][TOP]
>UniRef100_UPI0001B41595 RNA polymerase sigma factor RpoD n=1 Tax=Bacillus anthracis str.
A1055 RepID=UPI0001B41595
Length = 373
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 310 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 361
[98][TOP]
>UniRef100_UPI0001851148 RNA polymerase sigma factor RpoD n=1 Tax=Bacillus coahuilensis m4-4
RepID=UPI0001851148
Length = 337
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 274 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 325
[99][TOP]
>UniRef100_UPI0001789970 RNA polymerase, sigma 70 subunit, RpoD subfamily n=1
Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789970
Length = 377
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 314 DTLTEREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 365
[100][TOP]
>UniRef100_UPI0001693157 RNA polymerase sigma factor RpoD n=1 Tax=Paenibacillus larvae
subsp. larvae BRL-230010 RepID=UPI0001693157
Length = 375
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 312 DTLTEREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 363
[101][TOP]
>UniRef100_Q0SRH3 RNA polymerase sigma factor n=8 Tax=Clostridium perfringens
RepID=Q0SRH3_CLOPS
Length = 366
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 303 DTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 354
[102][TOP]
>UniRef100_Q8R970 RNA polymerase sigma factor n=1 Tax=Thermoanaerobacter
tengcongensis RepID=Q8R970_THETN
Length = 372
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 309 DTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 360
[103][TOP]
>UniRef100_Q8EPY6 RNA polymerase sigma factor n=1 Tax=Oceanobacillus iheyensis
RepID=Q8EPY6_OCEIH
Length = 380
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 317 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 368
[104][TOP]
>UniRef100_Q892T0 RNA polymerase sigma factor n=1 Tax=Clostridium tetani
RepID=Q892T0_CLOTE
Length = 366
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 303 DTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 354
[105][TOP]
>UniRef100_Q74IZ4 RNA polymerase sigma factor n=1 Tax=Lactobacillus johnsonii
RepID=Q74IZ4_LACJO
Length = 372
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 309 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 360
[106][TOP]
>UniRef100_Q65H81 RNA polymerase sigma factor n=1 Tax=Bacillus licheniformis ATCC
14580 RepID=Q65H81_BACLD
Length = 373
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 310 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 361
[107][TOP]
>UniRef100_Q5WHD0 RNA polymerase sigma factor n=1 Tax=Bacillus clausii KSM-K16
RepID=Q5WHD0_BACSK
Length = 373
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 310 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 361
[108][TOP]
>UniRef100_Q4L6R1 RNA polymerase sigma factor n=1 Tax=Staphylococcus haemolyticus
JCSC1435 RepID=Q4L6R1_STAHJ
Length = 368
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 305 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 356
[109][TOP]
>UniRef100_Q49Y04 RNA polymerase sigma factor n=1 Tax=Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305 RepID=Q49Y04_STAS1
Length = 368
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 305 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 356
[110][TOP]
>UniRef100_Q38X96 RNA polymerase sigma factor n=1 Tax=Lactobacillus sakei subsp.
sakei 23K RepID=Q38X96_LACSS
Length = 369
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 306 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 357
[111][TOP]
>UniRef100_Q1WTP3 RNA polymerase sigma factor n=1 Tax=Lactobacillus salivarius UCC118
RepID=Q1WTP3_LACS1
Length = 372
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 309 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 360
[112][TOP]
>UniRef100_Q03F68 RNA polymerase sigma factor n=1 Tax=Pediococcus pentosaceus ATCC
25745 RepID=Q03F68_PEDPA
Length = 379
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 316 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 367
[113][TOP]
>UniRef100_C6CTW1 RNA polymerase sigma factor n=1 Tax=Paenibacillus sp. JDR-2
RepID=C6CTW1_PAESJ
Length = 376
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 313 DTLTEREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 364
[114][TOP]
>UniRef100_C5D4R8 RNA polymerase sigma factor n=1 Tax=Geobacillus sp. WCH70
RepID=C5D4R8_GEOSW
Length = 374
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 311 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 362
[115][TOP]
>UniRef100_C4L3Z9 RNA polymerase sigma factor n=1 Tax=Exiguobacterium sp. AT1b
RepID=C4L3Z9_EXISA
Length = 364
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 301 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 352
[116][TOP]
>UniRef100_C3LKX1 RNA polymerase sigma factor n=2 Tax=Bacillus cereus group
RepID=C3LKX1_BACAC
Length = 373
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 310 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 361
[117][TOP]
>UniRef100_C0ZB92 RNA polymerase sigma factor n=1 Tax=Brevibacillus brevis NBRC
100599 RepID=C0ZB92_BREBN
Length = 376
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 313 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 364
[118][TOP]
>UniRef100_B9IY60 RNA polymerase sigma factor n=1 Tax=Bacillus cereus Q1
RepID=B9IY60_BACCQ
Length = 375
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 312 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 363
[119][TOP]
>UniRef100_B9E6V2 RNA polymerase sigma factor n=1 Tax=Macrococcus caseolyticus
JCSC5402 RepID=B9E6V2_MACCJ
Length = 366
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 303 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 354
[120][TOP]
>UniRef100_B9DNN2 RNA polymerase sigma factor n=1 Tax=Staphylococcus carnosus subsp.
carnosus TM300 RepID=B9DNN2_STACT
Length = 369
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 306 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 357
[121][TOP]
>UniRef100_B8I6N1 RNA polymerase sigma factor n=1 Tax=Clostridium cellulolyticum H10
RepID=B8I6N1_CLOCE
Length = 359
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 296 DTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 347
[122][TOP]
>UniRef100_B7GH73 RNA polymerase sigma factor n=1 Tax=Anoxybacillus flavithermus WK1
RepID=B7GH73_ANOFW
Length = 372
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 309 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 360
[123][TOP]
>UniRef100_B2TMC7 RNA polymerase sigma factor n=1 Tax=Clostridium botulinum B str.
Eklund 17B RepID=B2TMC7_CLOBB
Length = 374
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 311 DTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 362
[124][TOP]
>UniRef100_B1YL80 RNA polymerase sigma factor n=1 Tax=Exiguobacterium sibiricum
255-15 RepID=B1YL80_EXIS2
Length = 361
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 298 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 349
[125][TOP]
>UniRef100_B1HTI2 RNA polymerase sigma factor n=1 Tax=Lysinibacillus sphaericus C3-41
RepID=B1HTI2_LYSSC
Length = 375
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 312 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 363
[126][TOP]
>UniRef100_A8MG96 RNA polymerase sigma factor n=1 Tax=Alkaliphilus oremlandii OhILAs
RepID=A8MG96_ALKOO
Length = 372
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 309 DTLTPREQKVLRLRFGLDDGRARTLEEVGKKFDVTRERIRQIEAKALRKLRH 360
[127][TOP]
>UniRef100_A8FFA5 RNA polymerase sigma factor n=1 Tax=Bacillus pumilus SAFR-032
RepID=A8FFA5_BACP2
Length = 373
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 310 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 361
[128][TOP]
>UniRef100_A7Z6T5 RNA polymerase sigma factor n=1 Tax=Bacillus amyloliquefaciens
FZB42 RepID=A7Z6T5_BACA2
Length = 373
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 310 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 361
[129][TOP]
>UniRef100_A7GSY8 RNA polymerase sigma factor n=1 Tax=Bacillus cytotoxicus NVH 391-98
RepID=A7GSY8_BACCN
Length = 373
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 310 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 361
[130][TOP]
>UniRef100_A6TSG9 RNA polymerase sigma factor n=1 Tax=Alkaliphilus metalliredigens
QYMF RepID=A6TSG9_ALKMQ
Length = 372
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 309 DTLTPREQKVLRLRFGLDDGRARTLEEVGKKFDVTRERIRQIEAKALRKLRH 360
[131][TOP]
>UniRef100_A6LRQ7 RNA polymerase sigma factor n=1 Tax=Clostridium beijerinckii NCIMB
8052 RepID=A6LRQ7_CLOB8
Length = 376
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 313 DTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 364
[132][TOP]
>UniRef100_A5N6R2 RNA polymerase sigma factor n=2 Tax=Clostridium kluyveri
RepID=A5N6R2_CLOK5
Length = 354
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 291 DTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 342
[133][TOP]
>UniRef100_A3DDV0 RNA polymerase sigma factor n=1 Tax=Clostridium thermocellum ATCC
27405 RepID=A3DDV0_CLOTH
Length = 358
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 295 DTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 346
[134][TOP]
>UniRef100_A0Q1P4 RNA polymerase sigma factor n=1 Tax=Clostridium novyi NT
RepID=A0Q1P4_CLONN
Length = 368
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 305 DTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 356
[135][TOP]
>UniRef100_Q0TNV3 RNA polymerase sigma factor n=2 Tax=Clostridium perfringens
RepID=Q0TNV3_CLOP1
Length = 366
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 303 DTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 354
[136][TOP]
>UniRef100_Q2B288 RNA polymerase sigma factor n=1 Tax=Bacillus sp. NRRL B-14911
RepID=Q2B288_9BACI
Length = 374
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 311 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 362
[137][TOP]
>UniRef100_O52862 RNA polymerase sigma factor (Fragment) n=1 Tax=Lysinibacillus
sphaericus RepID=O52862_BACSH
Length = 140
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 77 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 128
[138][TOP]
>UniRef100_O08332 RNA polymerase sigma factor n=1 Tax=Staphylococcus aureus
RepID=O08332_STAAU
Length = 368
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 305 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 356
[139][TOP]
>UniRef100_C9B6G3 RNA polymerase sigma-43 factor n=8 Tax=Enterococcus faecium
RepID=C9B6G3_ENTFC
Length = 369
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 306 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 357
[140][TOP]
>UniRef100_C8P839 RNA polymerase sigma factor n=1 Tax=Lactobacillus antri DSM 16041
RepID=C8P839_9LACO
Length = 380
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 317 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 368
[141][TOP]
>UniRef100_C8M7C3 RNA polymerase sigma factor rpoD n=1 Tax=Staphylococcus aureus
A9299 RepID=C8M7C3_STAAU
Length = 368
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 305 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 356
[142][TOP]
>UniRef100_C8LTM9 Transcription initiation factor sigma plaC n=1 Tax=Staphylococcus
aureus A6300 RepID=C8LTM9_STAAU
Length = 368
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 305 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 356
[143][TOP]
>UniRef100_C8ACF1 RNA polymerase sigma factor rpoD n=1 Tax=Staphylococcus aureus
subsp. aureus 68-397 RepID=C8ACF1_STAAU
Length = 342
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 279 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 330
[144][TOP]
>UniRef100_C7ZXE7 Transcription initiation factor sigma plaC n=1 Tax=Staphylococcus
aureus subsp. aureus 55/2053 RepID=C7ZXE7_STAAU
Length = 368
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 305 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 356
[145][TOP]
>UniRef100_C7XU09 RNA polymerase sigma factor RpoS n=1 Tax=Lactobacillus coleohominis
101-4-CHN RepID=C7XU09_9LACO
Length = 381
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 318 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 369
[146][TOP]
>UniRef100_C7TJI1 RNA polymerase sigma factor n=1 Tax=Lactobacillus rhamnosus Lc 705
RepID=C7TJI1_LACRL
Length = 416
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 353 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 404
[147][TOP]
>UniRef100_C7HEX3 RNA polymerase, sigma 70 subunit, RpoD subfamily n=1
Tax=Clostridium thermocellum DSM 2360 RepID=C7HEX3_CLOTM
Length = 358
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 295 DTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 346
[148][TOP]
>UniRef100_C7CSZ1 RNA polymerase sigma factor n=1 Tax=Enterococcus faecalis T1
RepID=C7CSZ1_ENTFA
Length = 368
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 305 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 356
[149][TOP]
>UniRef100_C6QPZ7 RNA polymerase sigma factor n=1 Tax=Geobacillus sp. Y4.1MC1
RepID=C6QPZ7_9BACI
Length = 377
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 314 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 365
[150][TOP]
>UniRef100_C6Q7U2 RNA polymerase sigma factor n=1 Tax=Thermoanaerobacter mathranii
subsp. mathranii str. A3 RepID=C6Q7U2_9THEO
Length = 357
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 294 DTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 345
[151][TOP]
>UniRef100_C6PTX7 RNA polymerase sigma factor n=1 Tax=Clostridium carboxidivorans P7
RepID=C6PTX7_9CLOT
Length = 361
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 298 DTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 349
[152][TOP]
>UniRef100_C6PMA8 RNA polymerase sigma factor n=1 Tax=Thermoanaerobacter italicus Ab9
RepID=C6PMA8_9THEO
Length = 357
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 294 DTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 345
[153][TOP]
>UniRef100_C6P8V1 RNA polymerase sigma factor n=1 Tax=Thermoanaerobacterium
thermosaccharolyticum DSM 571 RepID=C6P8V1_CLOTS
Length = 357
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 294 DTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 345
[154][TOP]
>UniRef100_C6J365 RNA polymerase sigma factor n=1 Tax=Paenibacillus sp. oral taxon
786 str. D14 RepID=C6J365_9BACL
Length = 374
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 311 DTLTEREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 362
[155][TOP]
>UniRef100_C6IWD8 RNA polymerase sigma factor (Fragment) n=1 Tax=Paenibacillus sp.
oral taxon 786 str. D14 RepID=C6IWD8_9BACL
Length = 325
Score = 69.3 bits (168), Expect = 1e-10
Identities = 32/52 (61%), Positives = 43/52 (82%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFGMDDGR +TL+E+G+ GV+RERIRQIE+ A RKL++
Sbjct: 262 DTLTEREENVLRLRFGMDDGRTRTLEEVGKEFGVTRERIRQIEAKALRKLRH 313
[156][TOP]
>UniRef100_C5VRR6 RNA polymerase sigma factor n=1 Tax=Clostridium botulinum D str.
1873 RepID=C5VRR6_CLOBO
Length = 368
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 305 DTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 356
[157][TOP]
>UniRef100_B2V2K8 RNA polymerase sigma factor n=2 Tax=Clostridium botulinum E
RepID=B2V2K8_CLOBA
Length = 374
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 311 DTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 362
[158][TOP]
>UniRef100_B0K6Y0 RNA polymerase sigma factor n=6 Tax=Thermoanaerobacter
RepID=B0K6Y0_THEPX
Length = 357
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 294 DTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 345
[159][TOP]
>UniRef100_C5QXG6 RNA polymerase sigma factor n=1 Tax=Staphylococcus epidermidis
W23144 RepID=C5QXG6_STAEP
Length = 368
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 305 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 356
[160][TOP]
>UniRef100_C5QSV2 RNA polymerase sigma factor n=1 Tax=Staphylococcus epidermidis
M23864:W1 RepID=C5QSV2_STAEP
Length = 368
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 305 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 356
[161][TOP]
>UniRef100_C5F5B8 RNA polymerase sigma factor n=1 Tax=Lactobacillus paracasei subsp.
paracasei 8700:2 RepID=C5F5B8_LACPA
Length = 352
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 289 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 340
[162][TOP]
>UniRef100_C4WCC7 RNA polymerase sigma factor n=1 Tax=Staphylococcus warneri L37603
RepID=C4WCC7_STAWA
Length = 367
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 304 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 355
[163][TOP]
>UniRef100_C4VL08 RNA polymerase sigma factor n=3 Tax=Lactobacillus jensenii
RepID=C4VL08_9LACO
Length = 364
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 301 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 352
[164][TOP]
>UniRef100_C9RYK5 RNA polymerase, sigma 70 subunit, RpoD subfamily n=3
Tax=Geobacillus RepID=C9RYK5_9BACI
Length = 375
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 312 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 363
[165][TOP]
>UniRef100_C3AQQ2 RNA polymerase sigma factor n=3 Tax=Bacillus RepID=C3AQQ2_BACMY
Length = 373
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 310 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 361
[166][TOP]
>UniRef100_C2YWN0 RNA polymerase sigma factor n=1 Tax=Bacillus cereus AH1271
RepID=C2YWN0_BACCE
Length = 375
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 312 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 363
[167][TOP]
>UniRef100_C2WC75 RNA polymerase sigma factor n=1 Tax=Bacillus cereus Rock3-44
RepID=C2WC75_BACCE
Length = 373
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 310 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 361
[168][TOP]
>UniRef100_C2U2P5 RNA polymerase sigma factor n=3 Tax=Bacillus cereus
RepID=C2U2P5_BACCE
Length = 375
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 312 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 363
[169][TOP]
>UniRef100_B7HCR6 RNA polymerase sigma factor n=9 Tax=Bacillus cereus group
RepID=B7HCR6_BACC4
Length = 375
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 312 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 363
[170][TOP]
>UniRef100_A9VHS1 RNA polymerase sigma factor n=7 Tax=Bacillus cereus group
RepID=A9VHS1_BACWK
Length = 375
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 312 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 363
[171][TOP]
>UniRef100_C2PK08 RNA polymerase sigma factor n=1 Tax=Bacillus cereus MM3
RepID=C2PK08_BACCE
Length = 375
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 312 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 363
[172][TOP]
>UniRef100_B7HPJ2 RNA polymerase sigma factor n=9 Tax=Bacillus cereus group
RepID=B7HPJ2_BACC7
Length = 375
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 312 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 363
[173][TOP]
>UniRef100_C2M0X4 RNA polymerase sigma factor n=1 Tax=Staphylococcus hominis SK119
RepID=C2M0X4_STAHO
Length = 368
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 305 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 356
[174][TOP]
>UniRef100_C2JXD0 RNA polymerase sigma factor n=1 Tax=Lactobacillus rhamnosus LMS2-1
RepID=C2JXD0_LACRH
Length = 416
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 353 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 404
[175][TOP]
>UniRef100_C2HA56 RNA polymerase sigma factor n=4 Tax=Enterococcus faecium
RepID=C2HA56_ENTFC
Length = 369
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 306 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 357
[176][TOP]
>UniRef100_C2FI52 RNA polymerase sigma factor n=2 Tax=Lactobacillus plantarum
RepID=C2FI52_LACPL
Length = 368
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 305 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 356
[177][TOP]
>UniRef100_B3WEK4 RNA polymerase sigma factor n=3 Tax=Lactobacillus casei group
RepID=B3WEK4_LACCB
Length = 422
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 359 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 410
[178][TOP]
>UniRef100_C2EX53 RNA polymerase sigma factor n=2 Tax=Lactobacillus reuteri
RepID=C2EX53_LACRE
Length = 380
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 317 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 368
[179][TOP]
>UniRef100_C2ESB4 RNA polymerase sigma factor n=1 Tax=Lactobacillus vaginalis ATCC
49540 RepID=C2ESB4_9LACO
Length = 380
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 317 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 368
[180][TOP]
>UniRef100_C2EFJ0 RNA polymerase sigma factor n=1 Tax=Lactobacillus salivarius ATCC
11741 RepID=C2EFJ0_9LACO
Length = 372
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 309 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 360
[181][TOP]
>UniRef100_C2E8V2 RNA polymerase sigma factor n=1 Tax=Lactobacillus ruminis ATCC
25644 RepID=C2E8V2_9LACO
Length = 373
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 310 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 361
[182][TOP]
>UniRef100_C2E6R7 RNA polymerase sigma factor n=1 Tax=Lactobacillus johnsonii ATCC
33200 RepID=C2E6R7_LACJO
Length = 372
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 309 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 360
[183][TOP]
>UniRef100_C2E1K8 RNA polymerase sigma factor n=3 Tax=Lactobacillus jensenii
RepID=C2E1K8_9LACO
Length = 364
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 301 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 352
[184][TOP]
>UniRef100_C1PEH1 RNA polymerase sigma factor n=1 Tax=Bacillus coagulans 36D1
RepID=C1PEH1_BACCO
Length = 377
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 314 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 365
[185][TOP]
>UniRef100_C1IAB3 RNA polymerase sigma factor n=1 Tax=Clostridium sp. 7_2_43FAA
RepID=C1IAB3_9CLOT
Length = 370
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 307 DTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 358
[186][TOP]
>UniRef100_A5VJI3 RNA polymerase sigma factor n=4 Tax=Lactobacillus reuteri
RepID=A5VJI3_LACRD
Length = 380
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 317 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 368
[187][TOP]
>UniRef100_C0XLP2 RNA polymerase sigma factor n=2 Tax=Lactobacillus
RepID=C0XLP2_LACHI
Length = 389
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 326 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 377
[188][TOP]
>UniRef100_Q042Y7 RNA polymerase sigma factor n=3 Tax=Lactobacillus gasseri
RepID=Q042Y7_LACGA
Length = 373
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 310 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 361
[189][TOP]
>UniRef100_C0WTG9 RNA polymerase sigma factor n=1 Tax=Lactobacillus buchneri ATCC
11577 RepID=C0WTG9_LACBU
Length = 389
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 326 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 377
[190][TOP]
>UniRef100_C0GBZ7 RNA polymerase sigma factor n=1 Tax=Dethiobacter alkaliphilus AHT 1
RepID=C0GBZ7_9FIRM
Length = 372
Score = 69.3 bits (168), Expect = 1e-10
Identities = 30/52 (57%), Positives = 45/52 (86%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
++L PREK+V+ RFG++DGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 309 ETLTPREKKVLTLRFGLEDGRSRTLEEVGQVFGVTRERIRQIEAKALRKLRH 360
[191][TOP]
>UniRef100_B9CVA9 RNA polymerase sigma factor n=1 Tax=Staphylococcus capitis SK14
RepID=B9CVA9_STACP
Length = 368
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 305 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 356
[192][TOP]
>UniRef100_C8WY27 RNA polymerase, sigma 70 subunit, RpoD subfamily n=2
Tax=Alicyclobacillus acidocaldarius RepID=C8WY27_ALIAC
Length = 368
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 305 DTLTEREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 356
[193][TOP]
>UniRef100_B7IYE3 RNA polymerase sigma factor n=13 Tax=Bacillus cereus group
RepID=B7IYE3_BACC2
Length = 375
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 312 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 363
[194][TOP]
>UniRef100_C7TCR3 RNA polymerase sigma factor n=2 Tax=Lactobacillus rhamnosus
RepID=C7TCR3_LACRG
Length = 416
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 353 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 404
[195][TOP]
>UniRef100_A4IR10 RNA polymerase sigma factor n=2 Tax=Geobacillus RepID=A4IR10_GEOTN
Length = 375
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 312 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 363
[196][TOP]
>UniRef100_B4BFA9 RNA polymerase sigma factor n=1 Tax=Clostridium thermocellum DSM
4150 RepID=B4BFA9_CLOTM
Length = 87
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 24 DTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 75
[197][TOP]
>UniRef100_B3YVL5 RNA polymerase sigma factor n=1 Tax=Bacillus cereus W
RepID=B3YVL5_BACCE
Length = 373
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 310 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 361
[198][TOP]
>UniRef100_B3XRX4 RNA polymerase sigma factor n=1 Tax=Lactobacillus reuteri 100-23
RepID=B3XRX4_LACRE
Length = 380
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 317 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 368
[199][TOP]
>UniRef100_B1QWY9 RNA polymerase sigma factor n=2 Tax=Clostridium butyricum
RepID=B1QWY9_CLOBU
Length = 369
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 306 DTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 357
[200][TOP]
>UniRef100_A5I618 RNA polymerase sigma factor n=9 Tax=Clostridium botulinum
RepID=A5I618_CLOBH
Length = 361
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 298 DTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 349
[201][TOP]
>UniRef100_B1BDC8 RNA polymerase sigma factor n=1 Tax=Clostridium botulinum C str.
Eklund RepID=B1BDC8_CLOBO
Length = 368
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 305 DTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 356
[202][TOP]
>UniRef100_A0RIR5 RNA polymerase sigma factor n=20 Tax=Bacillus cereus group
RepID=A0RIR5_BACAH
Length = 373
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 310 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 361
[203][TOP]
>UniRef100_A8VUB1 RNA polymerase sigma factor n=1 Tax=Bacillus selenitireducens MLS10
RepID=A8VUB1_9BACI
Length = 73
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 10 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 61
[204][TOP]
>UniRef100_A3IBK5 RNA polymerase sigma factor n=1 Tax=Bacillus sp. B14905
RepID=A3IBK5_9BACI
Length = 375
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 312 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 363
[205][TOP]
>UniRef100_P52328 RNA polymerase sigma factor rpoD n=1 Tax=Bacillus sp.
RepID=RPSD2_BACSP
Length = 377
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 314 DTLTEREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 365
[206][TOP]
>UniRef100_Q5HNY7 RNA polymerase sigma factor rpoD n=3 Tax=Staphylococcus epidermidis
RepID=RPOD_STAEQ
Length = 368
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 305 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 356
[207][TOP]
>UniRef100_Q99TT5 RNA polymerase sigma factor rpoD n=1 Tax=Staphylococcus aureus
subsp. aureus N315 RepID=RPOD_STAAN
Length = 368
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 305 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 356
[208][TOP]
>UniRef100_P0A0J0 RNA polymerase sigma factor rpoD n=31 Tax=Staphylococcus aureus
RepID=RPOD_STAA8
Length = 368
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 305 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 356
[209][TOP]
>UniRef100_P52329 RNA polymerase sigma factor rpoD n=21 Tax=Enterococcus faecalis
RepID=RPOD_ENTFA
Length = 368
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 305 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 356
[210][TOP]
>UniRef100_P06224 RNA polymerase sigma factor rpoD n=1 Tax=Bacillus subtilis
RepID=RPOD_BACSU
Length = 371
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 308 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 359
[211][TOP]
>UniRef100_O66381 RNA polymerase sigma factor rpoD n=1 Tax=Bacillus halodurans
RepID=RPOD_BACHD
Length = 372
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 309 DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 360
[212][TOP]
>UniRef100_UPI0000F53BBC RNA polymerase sigma factor RpoD n=1 Tax=Listeria monocytogenes FSL
J2-071 RepID=UPI0000F53BBC
Length = 374
Score = 68.9 bits (167), Expect = 2e-10
Identities = 31/52 (59%), Positives = 43/52 (82%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G + GV+RERIRQIE+ A RKL++
Sbjct: 311 DTLTDREENVLRLRFGLDDGRTRTLEEVGRVFGVTRERIRQIEAKALRKLRH 362
[213][TOP]
>UniRef100_C9LTA9 RNA polymerase sigma factor RpoD n=1 Tax=Selenomonas sputigena ATCC
35185 RepID=C9LTA9_9FIRM
Length = 375
Score = 68.9 bits (167), Expect = 2e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE++V+R RFG+DDGR +TL+E+G+ GV+RERIRQIE+ A RKL++
Sbjct: 312 DTLTEREERVLRLRFGLDDGRARTLEEVGQNFGVTRERIRQIEAKALRKLRH 363
[214][TOP]
>UniRef100_C9AAM5 RNA polymerase sigma-43 factor n=3 Tax=Enterococcus casseliflavus
RepID=C9AAM5_ENTCA
Length = 368
Score = 68.9 bits (167), Expect = 2e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 305 DTLTDREENVLRLRFGIDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 356
[215][TOP]
>UniRef100_C8ZYV7 RNA polymerase sigma-43 factor n=1 Tax=Enterococcus gallinarum EG2
RepID=C8ZYV7_ENTGA
Length = 368
Score = 68.9 bits (167), Expect = 2e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 305 DTLTDREENVLRLRFGIDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 356
[216][TOP]
>UniRef100_C6VQS5 RNA polymerase sigma factor n=1 Tax=Lactobacillus plantarum JDM1
RepID=C6VQS5_LACPJ
Length = 368
Score = 68.9 bits (167), Expect = 2e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 305 DTLTNREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 356
[217][TOP]
>UniRef100_C5RE54 RNA polymerase sigma factor n=1 Tax=Clostridium cellulovorans 743B
RepID=C5RE54_CLOCL
Length = 363
Score = 68.9 bits (167), Expect = 2e-10
Identities = 31/52 (59%), Positives = 43/52 (82%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG+DDGR +TL+E+G V+RERIRQIE+ A RKL++
Sbjct: 300 DTLTPREEKVLRLRFGLDDGRARTLEEVGREFNVTRERIRQIEAKALRKLRH 351
[218][TOP]
>UniRef100_C2C209 RNA polymerase sigma factor n=1 Tax=Listeria grayi DSM 20601
RepID=C2C209_LISGR
Length = 389
Score = 68.9 bits (167), Expect = 2e-10
Identities = 31/52 (59%), Positives = 43/52 (82%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G + GV+RERIRQIE+ A RKL++
Sbjct: 326 DTLTDREENVLRLRFGLDDGRTRTLEEVGRVFGVTRERIRQIEAKALRKLRH 377
[219][TOP]
>UniRef100_B2GBZ9 RNA polymerase sigma factor n=3 Tax=Lactobacillus fermentum
RepID=B2GBZ9_LACF3
Length = 380
Score = 68.9 bits (167), Expect = 2e-10
Identities = 31/52 (59%), Positives = 43/52 (82%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G + GV+RERIRQIE+ A RKL++
Sbjct: 317 DTLTDREENVLRLRFGLDDGRTRTLEEVGRVFGVTRERIRQIEAKALRKLRH 368
[220][TOP]
>UniRef100_P52331 RNA polymerase sigma factor rpoD n=9 Tax=Listeria monocytogenes
RepID=RPOD_LISMO
Length = 374
Score = 68.9 bits (167), Expect = 2e-10
Identities = 31/52 (59%), Positives = 43/52 (82%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G + GV+RERIRQIE+ A RKL++
Sbjct: 311 DTLTDREENVLRLRFGLDDGRTRTLEEVGRVFGVTRERIRQIEAKALRKLRH 362
[221][TOP]
>UniRef100_Q92BQ6 RNA polymerase sigma factor rpoD n=3 Tax=Listeria RepID=RPOD_LISIN
Length = 374
Score = 68.9 bits (167), Expect = 2e-10
Identities = 31/52 (59%), Positives = 43/52 (82%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+E+G + GV+RERIRQIE+ A RKL++
Sbjct: 311 DTLTDREENVLRLRFGLDDGRTRTLEEVGRVFGVTRERIRQIEAKALRKLRH 362
[222][TOP]
>UniRef100_B9MQ36 RNA polymerase sigma factor n=1 Tax=Anaerocellum thermophilum DSM
6725 RepID=B9MQ36_ANATD
Length = 417
Score = 68.6 bits (166), Expect = 2e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
DSLN REK+V++ RFG++DGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 354 DSLNEREKKVLKLRFGLEDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 405
[223][TOP]
>UniRef100_A5GSD3 RNA polymerase sigma factor n=1 Tax=Synechococcus sp. RCC307
RepID=A5GSD3_SYNR3
Length = 401
Score = 68.6 bits (166), Expect = 2e-10
Identities = 31/51 (60%), Positives = 44/51 (86%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A KL++
Sbjct: 339 TLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKALLKLRH 389
[224][TOP]
>UniRef100_A4XHW4 RNA polymerase sigma factor n=1 Tax=Caldicellulosiruptor
saccharolyticus DSM 8903 RepID=A4XHW4_CALS8
Length = 411
Score = 68.6 bits (166), Expect = 2e-10
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
DSLN REK+V++ RFG++DGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 348 DSLNEREKKVLKLRFGLEDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 399
[225][TOP]
>UniRef100_C5RLU4 RNA polymerase sigma factor n=1 Tax=Clostridium cellulovorans 743B
RepID=C5RLU4_CLOCL
Length = 285
Score = 68.6 bits (166), Expect = 2e-10
Identities = 32/51 (62%), Positives = 41/51 (80%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+LN RE+ V+R RFG+DDG MKTL++IG V+RERIRQIES A +KL+N
Sbjct: 222 TLNEREQHVLRMRFGLDDGEMKTLEQIGNHFNVTRERIRQIESKALKKLRN 272
[226][TOP]
>UniRef100_A9RTR4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RTR4_PHYPA
Length = 591
Score = 68.6 bits (166), Expect = 2e-10
Identities = 31/50 (62%), Positives = 43/50 (86%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLK 85
+LNPRE++V+R RFG+DDG+ +TL+EIG + V+RERIRQIE+ A RKL+
Sbjct: 525 TLNPREREVLRLRFGLDDGQSRTLEEIGTLFKVTRERIRQIEAKAMRKLR 574
[227][TOP]
>UniRef100_UPI0001788764 RNA polymerase, sigma 70 subunit, RpoD subfamily n=1
Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788764
Length = 316
Score = 68.2 bits (165), Expect = 3e-10
Identities = 30/52 (57%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG++DGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 253 DTLTEREENVLRLRFGLEDGRTRTLEEVGQVFGVTRERIRQIEAKALRKLRH 304
[228][TOP]
>UniRef100_C1TPF1 RNA polymerase sigma factor n=1 Tax=Dethiosulfovibrio peptidovorans
DSM 11002 RepID=C1TPF1_9BACT
Length = 381
Score = 68.2 bits (165), Expect = 3e-10
Identities = 30/52 (57%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L+ RE++V+R+RFG++DGR TL+E+G GV+RERIRQIE+ A RKL++
Sbjct: 318 DALSDREREVLRYRFGLEDGRSYTLEEVGRRFGVTRERIRQIEAKALRKLRH 369
[229][TOP]
>UniRef100_UPI0001694293 RNA polymerase sigma factor RpoD n=1 Tax=Paenibacillus larvae
subsp. larvae BRL-230010 RepID=UPI0001694293
Length = 367
Score = 67.8 bits (164), Expect = 4e-10
Identities = 30/52 (57%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG++DGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 304 DTLTEREENVLRLRFGLEDGRSRTLEEVGKVFGVTRERIRQIEAKALRKLRH 355
[230][TOP]
>UniRef100_Q3AEW8 RNA polymerase sigma factor n=1 Tax=Carboxydothermus
hydrogenoformans Z-2901 RepID=Q3AEW8_CARHZ
Length = 370
Score = 67.8 bits (164), Expect = 4e-10
Identities = 30/51 (58%), Positives = 44/51 (86%)
Frame = -3
Query: 234 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
+L RE++V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 308 TLTEREQKVLRLRFGLDDGRARTLEEVGQIFGVTRERIRQIEAKALRKLRH 358
[231][TOP]
>UniRef100_Q2JJL6 RNA polymerase sigma factor n=1 Tax=Synechococcus sp.
JA-2-3B'a(2-13) RepID=Q2JJL6_SYNJB
Length = 403
Score = 67.8 bits (164), Expect = 4e-10
Identities = 30/52 (57%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
++L RE+ V++ R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A RKL++
Sbjct: 340 ETLTARERDVLKLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 391
[232][TOP]
>UniRef100_A8YVM2 RNA polymerase sigma factor n=1 Tax=Lactobacillus helveticus DPC
4571 RepID=A8YVM2_LACH4
Length = 356
Score = 67.8 bits (164), Expect = 4e-10
Identities = 30/52 (57%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
++L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 293 ETLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 344
[233][TOP]
>UniRef100_C9LZ42 RNA polymerase sigma factor rpoD n=1 Tax=Lactobacillus helveticus
DSM 20075 RepID=C9LZ42_LACHE
Length = 370
Score = 67.8 bits (164), Expect = 4e-10
Identities = 30/52 (57%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
++L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 307 ETLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 358
[234][TOP]
>UniRef100_C5RBJ7 RNA polymerase sigma factor n=1 Tax=Weissella paramesenteroides
ATCC 33313 RepID=C5RBJ7_WEIPA
Length = 378
Score = 67.8 bits (164), Expect = 4e-10
Identities = 30/52 (57%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG++DGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 315 DTLTDREENVLRLRFGLEDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 366
[235][TOP]
>UniRef100_C2KFH9 RNA polymerase sigma factor n=4 Tax=Lactobacillus crispatus
RepID=C2KFH9_9LACO
Length = 370
Score = 67.8 bits (164), Expect = 4e-10
Identities = 30/52 (57%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
++L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 307 ETLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 358
[236][TOP]
>UniRef100_C2HPX4 RNA polymerase sigma factor n=2 Tax=Lactobacillus acidophilus
RepID=C2HPX4_LACAC
Length = 370
Score = 67.8 bits (164), Expect = 4e-10
Identities = 30/52 (57%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
++L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 307 ETLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 358
[237][TOP]
>UniRef100_C2EK73 RNA polymerase sigma factor n=1 Tax=Lactobacillus ultunensis DSM
16047 RepID=C2EK73_9LACO
Length = 370
Score = 67.8 bits (164), Expect = 4e-10
Identities = 30/52 (57%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
++L RE+ V+R RFG+DDGR +TL+E+G++ GV+RERIRQIE+ A RKL++
Sbjct: 307 ETLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH 358
[238][TOP]
>UniRef100_A8U8N7 RNA polymerase sigma factor n=1 Tax=Carnobacterium sp. AT7
RepID=A8U8N7_9LACT
Length = 373
Score = 67.8 bits (164), Expect = 4e-10
Identities = 30/52 (57%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDGR +TL+++G++ GV+RERIRQIE+ A RKL++
Sbjct: 310 DTLTDREENVLRLRFGLDDGRNRTLEDVGKVFGVTRERIRQIEAKALRKLRH 361
[239][TOP]
>UniRef100_A7VZA6 RNA polymerase sigma factor n=1 Tax=Clostridium leptum DSM 753
RepID=A7VZA6_9CLOT
Length = 365
Score = 67.8 bits (164), Expect = 4e-10
Identities = 30/52 (57%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L PRE++V+R RFG++DGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 302 DTLTPREEKVLRLRFGLEDGRSRTLEEVGKEFNVTRERIRQIEAKALRKLRH 353
[240][TOP]
>UniRef100_Q03WT3 RNA polymerase sigma factor n=1 Tax=Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293 RepID=Q03WT3_LEUMM
Length = 432
Score = 67.4 bits (163), Expect = 5e-10
Identities = 30/52 (57%), Positives = 43/52 (82%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG++DGR +TL+E+G + GV+RERIRQIE+ A RKL++
Sbjct: 365 DTLTDREENVLRLRFGLEDGRTRTLEEVGRVFGVTRERIRQIEAKALRKLRH 416
[241][TOP]
>UniRef100_C4V564 RNA polymerase sigma factor n=1 Tax=Selenomonas flueggei ATCC 43531
RepID=C4V564_9FIRM
Length = 383
Score = 67.4 bits (163), Expect = 5e-10
Identities = 30/52 (57%), Positives = 43/52 (82%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
++L REK V+R RFG++DGR +TL+E+G+ GV+RERIRQIE+ A RKL++
Sbjct: 320 ETLTDREKNVLRLRFGLEDGRSRTLEEVGQSFGVTRERIRQIEAKALRKLRH 371
[242][TOP]
>UniRef100_C2KJ20 RNA polymerase sigma factor n=1 Tax=Leuconostoc mesenteroides
subsp. cremoris ATCC 19254 RepID=C2KJ20_LEUMC
Length = 432
Score = 67.4 bits (163), Expect = 5e-10
Identities = 30/52 (57%), Positives = 43/52 (82%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG++DGR +TL+E+G + GV+RERIRQIE+ A RKL++
Sbjct: 365 DTLTDREENVLRLRFGLEDGRTRTLEEVGRVFGVTRERIRQIEAKALRKLRH 416
[243][TOP]
>UniRef100_P33656 RNA polymerase sigma factor rpoD n=1 Tax=Clostridium acetobutylicum
RepID=RPOD_CLOAB
Length = 378
Score = 67.4 bits (163), Expect = 5e-10
Identities = 30/52 (57%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
++L PRE++V+R RFG+DDGR +TL+E+G+ V+RERIRQIE+ A RKL++
Sbjct: 315 NTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRH 366
[244][TOP]
>UniRef100_UPI0001BB55B2 RNA polymerase sigma factor RpoD n=1 Tax=Streptococcus sp.
2_1_36FAA RepID=UPI0001BB55B2
Length = 370
Score = 67.0 bits (162), Expect = 6e-10
Identities = 29/52 (55%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDG+M+TL+++G++ V+RERIRQIE+ A RKL++
Sbjct: 306 DTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRH 357
[245][TOP]
>UniRef100_Q8P1I9 RNA polymerase sigma factor n=1 Tax=Streptococcus pyogenes serotype
M18 RepID=Q8P1I9_STRP8
Length = 369
Score = 67.0 bits (162), Expect = 6e-10
Identities = 29/52 (55%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDG+M+TL+++G++ V+RERIRQIE+ A RKL++
Sbjct: 305 DTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRH 356
[246][TOP]
>UniRef100_Q8K811 RNA polymerase sigma factor n=1 Tax=Streptococcus pyogenes serotype
M3 RepID=Q8K811_STRP3
Length = 369
Score = 67.0 bits (162), Expect = 6e-10
Identities = 29/52 (55%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDG+M+TL+++G++ V+RERIRQIE+ A RKL++
Sbjct: 305 DTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRH 356
[247][TOP]
>UniRef100_Q5M3E3 RNA polymerase sigma factor n=1 Tax=Streptococcus thermophilus LMG
18311 RepID=Q5M3E3_STRT2
Length = 369
Score = 67.0 bits (162), Expect = 6e-10
Identities = 29/52 (55%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDG+M+TL+++G++ V+RERIRQIE+ A RKL++
Sbjct: 305 DTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRH 356
[248][TOP]
>UniRef100_Q03JL2 RNA polymerase sigma factor n=2 Tax=Streptococcus thermophilus
RepID=Q03JL2_STRTD
Length = 369
Score = 67.0 bits (162), Expect = 6e-10
Identities = 29/52 (55%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDG+M+TL+++G++ V+RERIRQIE+ A RKL++
Sbjct: 305 DTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRH 356
[249][TOP]
>UniRef100_C5WFT4 RNA polymerase sigma factor n=1 Tax=Streptococcus dysgalactiae
subsp. equisimilis GGS_124 RepID=C5WFT4_STRDG
Length = 369
Score = 67.0 bits (162), Expect = 6e-10
Identities = 29/52 (55%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDG+M+TL+++G++ V+RERIRQIE+ A RKL++
Sbjct: 305 DTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRH 356
[250][TOP]
>UniRef100_C0MGY0 RNA polymerase sigma factor n=1 Tax=Steptococcus equi subsp.
zooepidemicus H70 RepID=C0MGY0_STRS7
Length = 369
Score = 67.0 bits (162), Expect = 6e-10
Identities = 29/52 (55%), Positives = 44/52 (84%)
Frame = -3
Query: 237 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFRKLKN 82
D+L RE+ V+R RFG+DDG+M+TL+++G++ V+RERIRQIE+ A RKL++
Sbjct: 305 DTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRH 356