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[1][TOP]
>UniRef100_Q9BBQ4 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lotus japonicus
RepID=RPOA_LOTJA
Length = 333
Score = 346 bits (888), Expect = 5e-94
Identities = 170/172 (98%), Positives = 170/172 (98%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE
Sbjct: 82 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL
Sbjct: 142 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFTC 3
EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFEN HKVTLPLFTC
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENNEHKVTLPLFTC 253
[2][TOP]
>UniRef100_UPI0001596B8A RNA polymerase alpha subunit n=1 Tax=Medicago truncatula
RepID=UPI0001596B8A
Length = 333
Score = 313 bits (802), Expect = 4e-84
Identities = 154/171 (90%), Positives = 158/171 (92%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E +HEILMNLKEIVLKSNLYG RDASICFKGPGYVTAQ+IILPPSV IVDNTQHIAN+TE
Sbjct: 82 ESIHEILMNLKEIVLKSNLYGTRDASICFKGPGYVTAQDIILPPSVEIVDNTQHIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCI LQIER RGYRI TL N QDGSY IDA+FMPVRNANHSIHSYVNGNEKQEILFL
Sbjct: 142 PINLCIELQIERKRGYRIKTLNNIQDGSYTIDAVFMPVRNANHSIHSYVNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEE LNFEN HKVTLPLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFENNQHKVTLPLFT 252
[3][TOP]
>UniRef100_C6TK62 Putative uncharacterized protein (Fragment) n=1 Tax=Glycine max
RepID=C6TK62_SOYBN
Length = 269
Score = 308 bits (788), Expect = 2e-82
Identities = 151/171 (88%), Positives = 157/171 (91%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG RDASICFKGPGYVTAQ+IILPPSV IVDNTQHIANVTE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQDIILPPSVEIVDNTQHIANVTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
P+ LCI L+IER+RGYRI TLKNFQDGSY IDA FMPVRN NHSIHSYVNGNEKQEILFL
Sbjct: 142 PVNLCIELKIERNRGYRIKTLKNFQDGSYPIDATFMPVRNVNHSIHSYVNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEE+ N EN HKVTLPLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEDNFNLENNQHKVTLPLFT 252
[4][TOP]
>UniRef100_Q2PMQ3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Glycine max
RepID=RPOA_SOYBN
Length = 333
Score = 308 bits (788), Expect = 2e-82
Identities = 151/171 (88%), Positives = 157/171 (91%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG RDASICFKGPGYVTAQ+IILPPSV IVDNTQHIANVTE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQDIILPPSVEIVDNTQHIANVTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
P+ LCI L+IER+RGYRI TLKNFQDGSY IDA FMPVRN NHSIHSYVNGNEKQEILFL
Sbjct: 142 PVNLCIELKIERNRGYRIKTLKNFQDGSYPIDATFMPVRNVNHSIHSYVNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEE+ N EN HKVTLPLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEDNFNLENNQHKVTLPLFT 252
[5][TOP]
>UniRef100_P13911 DNA-directed RNA polymerase subunit alpha n=1 Tax=Pisum sativum
RepID=RPOA_PEA
Length = 334
Score = 300 bits (768), Expect = 4e-80
Identities = 147/171 (85%), Positives = 157/171 (91%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E +HEILMNLKEIVL+SNLYG R+ASICFKGPGYVTAQ+IILP SV ++DNTQHIAN+TE
Sbjct: 82 ESIHEILMNLKEIVLRSNLYGTREASICFKGPGYVTAQDIILP-SVEVIDNTQHIANLTE 140
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCI LQIER RGYRI TL N QDGSY IDA+FMPVRNANHSIHSYVNGN+KQEILFL
Sbjct: 141 PINLCIELQIERKRGYRIKTLNNIQDGSYTIDAVFMPVRNANHSIHSYVNGNQKQEILFL 200
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEE LNFEN HK+TLPLFT
Sbjct: 201 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFENNQHKMTLPLFT 251
[6][TOP]
>UniRef100_Q8MC99 DNA-directed RNA polymerase subunit alpha n=1 Tax=Vigna angularis
RepID=RPOA_PHAAN
Length = 333
Score = 294 bits (753), Expect = 2e-78
Identities = 144/171 (84%), Positives = 154/171 (90%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEI MNLKEIVLKSN+YG +DASI FKGPGY+TAQ+IILPPSV IVDN QHIANVTE
Sbjct: 82 ESVHEIFMNLKEIVLKSNMYGTQDASISFKGPGYITAQDIILPPSVEIVDNRQHIANVTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
P+ LCI L+IER+RGYRI TLKNFQDGSY+IDA FMPVRN N+SIHSYVNGNEKQEILFL
Sbjct: 142 PVNLCIELKIERNRGYRIKTLKNFQDGSYDIDARFMPVRNVNYSIHSYVNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEAS+NLIDLFIPFLHAEEE N E HKVTLPLFT
Sbjct: 202 EIWTNGSLTPKEALYEASQNLIDLFIPFLHAEEENFNLEKKKHKVTLPLFT 252
[7][TOP]
>UniRef100_B5LMQ5 RNA polymerase alpha subunit n=1 Tax=Cicer arietinum
RepID=B5LMQ5_CICAR
Length = 333
Score = 294 bits (752), Expect = 3e-78
Identities = 144/171 (84%), Positives = 155/171 (90%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E +HEILMNLKEIVL+SNLYG RDASICFKGPG VTAQ+IILPPSV IVDNTQHIAN+TE
Sbjct: 82 ESIHEILMNLKEIVLRSNLYGTRDASICFKGPGSVTAQDIILPPSVEIVDNTQHIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LC+ L++ER+RGYRI TL N QD SY IDA+FMPVRNANHSIHSY NGNEKQEILFL
Sbjct: 142 PINLCMELKLERNRGYRIKTLNNIQDESYTIDAVFMPVRNANHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEE+KLN EN KVTLPLFT
Sbjct: 202 EIWTNGSLTPKEALFEASRNLIDLFIPFLHAEEDKLNLENNQQKVTLPLFT 252
[8][TOP]
>UniRef100_A4GGD7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Phaseolus
vulgaris RepID=RPOA_PHAVU
Length = 333
Score = 291 bits (745), Expect = 2e-77
Identities = 142/171 (83%), Positives = 155/171 (90%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEI MNLKEIVLKSN+YGI+DASI FKGPGY+TAQ+IILPPSV IVDN QHIANVTE
Sbjct: 82 ESVHEIFMNLKEIVLKSNMYGIQDASISFKGPGYITAQDIILPPSVEIVDNRQHIANVTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
P+ LCI L+IER+RGYRI TLKNFQDGSY+IDA FMPVRN N+SIHSYVNGNEKQEILFL
Sbjct: 142 PVHLCIELKIERNRGYRIKTLKNFQDGSYDIDARFMPVRNVNYSIHSYVNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEAS+NLI+LFIPFLHAEE+ + E HKVTLPLFT
Sbjct: 202 EIWTNGSLTPKEALYEASQNLIELFIPFLHAEEDNFHLEKNQHKVTLPLFT 252
[9][TOP]
>UniRef100_Q49KW6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Eucalyptus
globulus subsp. globulus RepID=RPOA_EUCGG
Length = 337
Score = 289 bits (739), Expect = 9e-77
Identities = 144/171 (84%), Positives = 154/171 (90%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG R+ASIC KGPG VTAQ+IILP SV IVDNTQ+IAN+TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTRNASICVKGPGCVTAQDIILPTSVEIVDNTQYIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGLQIER+RGY I T KNFQDGSY IDA+FMPVRNANHSIHSY NGNEKQEILFL
Sbjct: 142 PINLCIGLQIERNRGYHIKTPKNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEE L+ EN +KVTLP FT
Sbjct: 202 EIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENLHLENNQYKVTLPFFT 252
[10][TOP]
>UniRef100_B5AH30 RNA polymerase alpha subunit n=1 Tax=Gonystylus bancanus
RepID=B5AH30_9ROSI
Length = 329
Score = 284 bits (726), Expect = 3e-75
Identities = 140/170 (82%), Positives = 149/170 (87%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG R+A IC KGPGYVTAQ+IILPPSV IVDNTQHIA++TE
Sbjct: 84 ESVHEILMNLKEIVLRSNLYGTRNAFICAKGPGYVTAQDIILPPSVEIVDNTQHIASLTE 143
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGLQIER+RGY I T NF DGSY ID +FMPVRN NHSIHSY NGNEKQEILFL
Sbjct: 144 PIDLCIGLQIERNRGYGIKTPNNFHDGSYPIDVVFMPVRNVNHSIHSYGNGNEKQEILFL 203
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEE + EN HKVTLP F
Sbjct: 204 EIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENSHLENSQHKVTLPFF 253
[11][TOP]
>UniRef100_Q09WY5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Morus indica
RepID=RPOA_MORIN
Length = 323
Score = 284 bits (726), Expect = 3e-75
Identities = 143/170 (84%), Positives = 151/170 (88%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG RDASIC KGPGYVTAQ+IILPPSV IVDNTQHIAN+TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTRDASICVKGPGYVTAQDIILPPSVEIVDNTQHIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCI LQIER+RGYRI T NFQ+GSY IDA+FMPVRNANHSIHSYVNGNE QEILFL
Sbjct: 142 PITLCIELQIERNRGYRIKTPNNFQNGSYPIDAVFMPVRNANHSIHSYVNGNENQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNGSLTPKEAL+EASRNLIDLFIPF HAEE + EN HK TLPLF
Sbjct: 202 EIWTNGSLTPKEALHEASRNLIDLFIPFFHAEE---HLENNQHKGTLPLF 248
[12][TOP]
>UniRef100_Q4VZK3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cucumis sativus
RepID=RPOA_CUCSA
Length = 333
Score = 283 bits (723), Expect = 6e-75
Identities = 144/173 (83%), Positives = 152/173 (87%), Gaps = 2/173 (1%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG RDASIC KGPG VTAQ+IILPPSV IVDNTQHIAN+ E
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLME 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCI L+IER+RGY I T NFQD SY +DAIFMPVRN NHSIHSYVNGNEKQEILFL
Sbjct: 142 PINLCIELKIERNRGYHIQTPNNFQDASYPMDAIFMPVRNVNHSIHSYVNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNF--ENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEEK NF +N KVTLPLFT
Sbjct: 202 EIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEEKENFHLKNNKKKVTLPLFT 254
[13][TOP]
>UniRef100_C0LEA6 RpoA n=1 Tax=Jatropha curcas RepID=C0LEA6_9ROSI
Length = 339
Score = 281 bits (720), Expect = 1e-74
Identities = 139/171 (81%), Positives = 150/171 (87%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E +HEILMNLK +VLKSNLYG DASI KGPGYVTAQ+IILPP V I+DNTQHIA++TE
Sbjct: 82 ESIHEILMNLKNVVLKSNLYGTCDASIYVKGPGYVTAQDIILPPFVEIIDNTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I LCIGLQIER+RGYRI NFQDGSY IDA+FMPVRNANHS+HSY NGNEKQEILFL
Sbjct: 142 SIDLCIGLQIERNRGYRIKPTNNFQDGSYPIDAVFMPVRNANHSVHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEE L+ E HKVTLPLFT
Sbjct: 202 EIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENLHLEINQHKVTLPLFT 252
[14][TOP]
>UniRef100_B1A967 RNA polymerase alpha chain n=1 Tax=Carica papaya RepID=B1A967_CARPA
Length = 327
Score = 281 bits (720), Expect = 1e-74
Identities = 140/170 (82%), Positives = 150/170 (88%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG RDA IC KGPGYVTAQ+I+LPPSV IVDNTQHIA++TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTRDAFICVKGPGYVTAQDIVLPPSVEIVDNTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI L IGLQIER+RGY I T NFQDGSY IDA+FMPV+NANHSIHSY GNEKQEILFL
Sbjct: 142 PIDLRIGLQIERNRGYGIKTPNNFQDGSYPIDAVFMPVQNANHSIHSYGTGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNGSLTPKEAL+EASRNLI+LFIPFLHAEEEK EN HKVTLP F
Sbjct: 202 EIWTNGSLTPKEALHEASRNLINLFIPFLHAEEEKFYLENNQHKVTLPFF 251
[15][TOP]
>UniRef100_B8R4C0 RNA polymerase alpha subunit n=1 Tax=Trifolium subterraneum
RepID=B8R4C0_TRISU
Length = 337
Score = 281 bits (719), Expect = 2e-74
Identities = 139/172 (80%), Positives = 152/172 (88%), Gaps = 2/172 (1%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E +HEILMNLK+IVL+SNLYG RDASICFKGPGYVTA++IILPPSV IVDNTQHIAN+TE
Sbjct: 82 ESIHEILMNLKQIVLRSNLYGTRDASICFKGPGYVTARDIILPPSVEIVDNTQHIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDA--IFMPVRNANHSIHSYVNGNEKQEIL 165
PI LCI LQIER RGYR T+ N QDGSY ID +FMPV +AN+SIHSY+N NEKQEIL
Sbjct: 142 PINLCIELQIERARGYRKKTIDNIQDGSYTIDVDPVFMPVIHANYSIHSYLNANEKQEIL 201
Query: 164 FLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
FLEIWTNGSLTPKEALYEA+RNLIDLFIPFLHAEEE +FEN HKVTLPLF
Sbjct: 202 FLEIWTNGSLTPKEALYEAARNLIDLFIPFLHAEEENFHFENNQHKVTLPLF 253
[16][TOP]
>UniRef100_Q2L938 DNA-directed RNA polymerase subunit alpha n=1 Tax=Gossypium
hirsutum RepID=RPOA_GOSHI
Length = 329
Score = 280 bits (717), Expect = 3e-74
Identities = 138/170 (81%), Positives = 148/170 (87%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+ NLYG R+A IC KGPGYVTAQ+IILPPSV IVDNTQH+A++TE
Sbjct: 84 ESVHEILMNLKEIVLRGNLYGTRNAFICAKGPGYVTAQDIILPPSVEIVDNTQHVASLTE 143
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGLQIER+RGY I T KNF DGSY IDA+FMPVRNANHSIH Y N NEKQEILFL
Sbjct: 144 PIDLCIGLQIERNRGYGIKTPKNFHDGSYPIDAVFMPVRNANHSIHCYGNDNEKQEILFL 203
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNGSLTPKEAL+EASRNLIDLFIPFLH EEE L+ EN H VTLP F
Sbjct: 204 EIWTNGSLTPKEALHEASRNLIDLFIPFLHTEEENLHLENNQHDVTLPFF 253
[17][TOP]
>UniRef100_A4GYU3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Populus
trichocarpa RepID=RPOA_POPTR
Length = 339
Score = 277 bits (709), Expect = 3e-73
Identities = 135/170 (79%), Positives = 150/170 (88%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E +HEILMNLKEIVL+SNLYG DASIC KGPG VTAQ+IILPPSV I+DNTQHIA++ E
Sbjct: 82 ESIHEILMNLKEIVLRSNLYGTHDASICVKGPGCVTAQDIILPPSVEIIDNTQHIASLRE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI L IGL+IER+RGY + KNFQDGSY+IDA+FMPVRNANHS+HSY NGNEKQEILFL
Sbjct: 142 PIDLHIGLEIERNRGYCMKPPKNFQDGSYSIDAVFMPVRNANHSVHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEE + E HK+TLPLF
Sbjct: 202 EIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENFHLEKNQHKITLPLF 251
[18][TOP]
>UniRef100_A9QBM7 RNA polymerase alpha subunit (Fragment) n=1 Tax=Musa acuminata
RepID=A9QBM7_MUSAC
Length = 339
Score = 276 bits (707), Expect = 5e-73
Identities = 135/171 (78%), Positives = 149/171 (87%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEIL+NLKEIVL+SN+YG+RDASIC +GP YVTAQ+II PPSV IVD TQHIAN+TE
Sbjct: 82 ESVHEILLNLKEIVLRSNIYGVRDASICARGPKYVTAQDIISPPSVEIVDTTQHIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGLQI RDRGYR N Q+GSY IDA+ MPVRNANHSIHSY NGNEKQEILFL
Sbjct: 142 PIDLCIGLQIRRDRGYRTKPTTNSQNGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEE +NF+ ++ TLP+FT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEDINFKENKNRFTLPIFT 252
[19][TOP]
>UniRef100_Q14FC5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Populus alba
RepID=RPOA_POPAL
Length = 339
Score = 275 bits (704), Expect = 1e-72
Identities = 134/170 (78%), Positives = 150/170 (88%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E +HEILMNLKEIVL+SNLYG +ASIC KGPG VTAQ+IILPPSV I+DNTQHIA++ E
Sbjct: 82 ESIHEILMNLKEIVLRSNLYGTHNASICVKGPGCVTAQDIILPPSVEIIDNTQHIASLRE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI L IGL+IER+RGY + KNFQDGSY+IDA+FMPVRNANHS+HSY NGNEKQEILFL
Sbjct: 142 PIDLHIGLEIERNRGYCMKPPKNFQDGSYSIDAVFMPVRNANHSVHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEE + E HK+TLPLF
Sbjct: 202 EIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEESFHLEKNQHKITLPLF 251
[20][TOP]
>UniRef100_Q09G14 DNA-directed RNA polymerase subunit alpha n=1 Tax=Platanus
occidentalis RepID=RPOA_PLAOC
Length = 337
Score = 275 bits (704), Expect = 1e-72
Identities = 135/171 (78%), Positives = 149/171 (87%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG R+ASIC +GPGYVTAQ+II PPSV VDNTQHIAN+TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTRNASICIRGPGYVTAQDIISPPSVETVDNTQHIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI L+IER+RGYR+ T N QDGSY IDA+FMPVRNANHSIHSY NGNEKQEILFL
Sbjct: 142 PIDFCIELEIERNRGYRMKTPNNSQDGSYPIDAVFMPVRNANHSIHSYANGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLFIPFLHA+EE + E+ + VTLP FT
Sbjct: 202 EIWTNGSLTPKEALHEASRNLIDLFIPFLHAQEENILLEDNQNGVTLPFFT 252
[21][TOP]
>UniRef100_Q5QA74 DNA-directed RNA polymerase subunit alpha n=1 Tax=Acorus gramineus
RepID=RPOA_ACOGR
Length = 337
Score = 275 bits (703), Expect = 1e-72
Identities = 135/171 (78%), Positives = 150/171 (87%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG RDASIC +GP VTAQ+II PPSV +VD TQHIA++TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTRDASICVRGPRCVTAQDIISPPSVEVVDTTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGLQI+RDRGYR+ T KN QDGSY IDA+ MPVRNANHSIHSY NGN+KQEILFL
Sbjct: 142 PIDLCIGLQIQRDRGYRMKTTKNSQDGSYPIDAVSMPVRNANHSIHSYGNGNQKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEE +NFE ++ T+P FT
Sbjct: 202 EIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEEDINFEENQNRFTVPPFT 252
[22][TOP]
>UniRef100_Q3V502 DNA-directed RNA polymerase subunit alpha n=2 Tax=Acorus
RepID=RPOA_ACOCL
Length = 337
Score = 275 bits (703), Expect = 1e-72
Identities = 135/171 (78%), Positives = 150/171 (87%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG RDASIC +GP VTAQ+II PPSV +VD TQHIA++TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTRDASICVRGPRCVTAQDIISPPSVEVVDTTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGLQI+RDRGYR+ T KN QDGSY IDA+ MPVRNANHSIHSY NGN+KQEILFL
Sbjct: 142 PIDLCIGLQIQRDRGYRMKTTKNSQDGSYPIDAVSMPVRNANHSIHSYGNGNQKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEE +NFE ++ T+P FT
Sbjct: 202 EIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEEDINFEENQNRFTVPPFT 252
[23][TOP]
>UniRef100_B1NWI2 RNA polymerase alpha subunit n=1 Tax=Manihot esculenta
RepID=B1NWI2_MANES
Length = 343
Score = 274 bits (701), Expect = 2e-72
Identities = 138/174 (79%), Positives = 151/174 (86%), Gaps = 4/174 (2%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E +HEILMNLKEIVL+SNLYG DASIC KGPGYVTAQ+IILPP V I+DNTQHIA++T+
Sbjct: 82 ESIHEILMNLKEIVLRSNLYGTCDASICVKGPGYVTAQDIILPPFVEIIDNTQHIASLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQ--DGSYNIDAIFMPVRNANHSIHSYVNGNEKQEIL 165
I LCIGLQIER+RGYRI NFQ DGSY+IDA+FMPVRNANHS+HSY NGNEKQEIL
Sbjct: 142 AIDLCIGLQIERNRGYRIKPTNNFQVQDGSYSIDAVFMPVRNANHSVHSYGNGNEKQEIL 201
Query: 164 FLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN--FENMXHKVTLPLF 9
FLEIWTNGSLTPKEAL+EASRNLID FIPFLHAEEE L+ E HKVTLPLF
Sbjct: 202 FLEIWTNGSLTPKEALHEASRNLIDFFIPFLHAEEENLHLEIEKNQHKVTLPLF 255
[24][TOP]
>UniRef100_Q4FGA0 RNA polymerase alpha chain (Fragment) n=1 Tax=Typha latifolia
RepID=Q4FGA0_TYPLA
Length = 339
Score = 274 bits (700), Expect = 3e-72
Identities = 136/171 (79%), Positives = 148/171 (86%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEIL+NLKEIVL+SNLYG+RDASIC +GP YVTAQ+IILPPSV IVD TQHIAN+TE
Sbjct: 82 ESVHEILLNLKEIVLRSNLYGVRDASICVRGPRYVTAQDIILPPSVEIVDPTQHIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI L I LQI+RDRGYR+ N QDGSY IDA+ MPVRNANHSIHSY NGNEKQEILFL
Sbjct: 142 PIDLYIELQIKRDRGYRMEPTNNSQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEE +NFE ++ TLP T
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEDINFEENKNRFTLPFLT 252
[25][TOP]
>UniRef100_B0Z4Q8 RNA polymerase alpha subunit n=2 Tax=Oenothera RepID=B0Z4Q8_OENAR
Length = 366
Score = 274 bits (700), Expect = 3e-72
Identities = 135/171 (78%), Positives = 149/171 (87%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG +ASIC KGPG VTAQ+I+LPPSV I+DNTQHIA++ E
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTCNASICVKGPGCVTAQDILLPPSVEIIDNTQHIASLME 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGLQIER+RGY I + NFQDGSY IDA+FMPVRNANHSIHSY N NEKQEILFL
Sbjct: 142 PIHLCIGLQIERNRGYHIKSPNNFQDGSYPIDAVFMPVRNANHSIHSYGNQNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLF+PFLHAEEE L+ N + VT PLFT
Sbjct: 202 EIWTNGSLTPKEALHEASRNLIDLFLPFLHAEEENLHLGNNKYNVTFPLFT 252
[26][TOP]
>UniRef100_A7R909 Chromosome undetermined scaffold_3171, whole genome shotgun
sequence n=1 Tax=Vitis vinifera RepID=A7R909_VITVI
Length = 313
Score = 273 bits (699), Expect = 4e-72
Identities = 137/171 (80%), Positives = 146/171 (85%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG R A IC +GPGYVTAQ+II PPSV IVDNTQHIA + E
Sbjct: 76 ESVHEILMNLKEIVLRSNLYGTRGAFICARGPGYVTAQDIISPPSVEIVDNTQHIARLME 135
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGLQIER+RGY I NFQDGSY IDA+FMPVRNANHSIHSY NGNE+QEILFL
Sbjct: 136 PIDLCIGLQIERNRGYSIKRPNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNERQEILFL 195
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEE L+ E HK TLP T
Sbjct: 196 EIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEETLHLEYNQHKSTLPPLT 246
[27][TOP]
>UniRef100_Q0ZIY7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Vitis vinifera
RepID=RPOA_VITVI
Length = 331
Score = 273 bits (699), Expect = 4e-72
Identities = 137/171 (80%), Positives = 146/171 (85%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG R A IC +GPGYVTAQ+II PPSV IVDNTQHIA + E
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTRGAFICARGPGYVTAQDIISPPSVEIVDNTQHIARLME 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGLQIER+RGY I NFQDGSY IDA+FMPVRNANHSIHSY NGNE+QEILFL
Sbjct: 142 PIDLCIGLQIERNRGYSIKRPNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNERQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEE L+ E HK TLP T
Sbjct: 202 EIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEETLHLEYNQHKSTLPPLT 252
[28][TOP]
>UniRef100_A0ZZ67 DNA-directed RNA polymerase subunit alpha n=1 Tax=Gossypium
barbadense RepID=RPOA_GOSBA
Length = 330
Score = 273 bits (699), Expect = 4e-72
Identities = 136/170 (80%), Positives = 147/170 (86%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+ NLYG R+A IC KGPGYVTAQ+IILPPSV IVDNTQH+A++TE
Sbjct: 84 ESVHEILMNLKEIVLRGNLYGTRNAFICAKGPGYVTAQDIILPPSVEIVDNTQHVASLTE 143
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGLQIER+RGY I T KNF DGSY IDA+FMPVRNANHSIH Y N NEKQEILFL
Sbjct: 144 PIDLCIGLQIERNRGYGIKTPKNFHDGSYPIDAVFMPVRNANHSIHCYGNDNEKQEILFL 203
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNGSLTPKEAL+EASRNLIDLFI FLHA+EE L+ EN H VTL F
Sbjct: 204 EIWTNGSLTPKEALHEASRNLIDLFIHFLHAKEENLHLENNQHDVTLHFF 253
[29][TOP]
>UniRef100_A9QBD4 RNA polymerase alpha subunit (Fragment) n=1 Tax=Elaeis oleifera
RepID=A9QBD4_ELAOL
Length = 339
Score = 273 bits (698), Expect = 5e-72
Identities = 134/171 (78%), Positives = 148/171 (86%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEIL+NLKEI+L+SNLYG+ DASIC +GP YVTAQ+II PP V IVD TQHIAN+TE
Sbjct: 82 ESVHEILLNLKEIILRSNLYGVIDASICVRGPRYVTAQDIISPPYVEIVDTTQHIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCI LQI+RDRGYR+ + N QDGSY IDA+ MPVRNANHSIHSY NGNEKQEILFL
Sbjct: 142 PIDLCIELQIKRDRGYRMKSANNSQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEE +NFE ++ LPLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEDINFEENKNRFPLPLFT 252
[30][TOP]
>UniRef100_Q2MIF6 DNA-directed RNA polymerase subunit alpha n=2 Tax=Solanum
RepID=RPOA_SOLBU
Length = 337
Score = 273 bits (697), Expect = 7e-72
Identities = 135/171 (78%), Positives = 147/171 (85%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG DASIC KGPGYVTAQ+IILPP V IVDNTQHIA++TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTSDASICVKGPGYVTAQDIILPPYVEIVDNTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CIGLQIER+RGY I T NFQDGSY IDA+FMPVRNANHSIHSY NGNEKQEILF+
Sbjct: 142 PIDFCIGLQIERNRGYLIKTPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFI 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL++ASRNLIDLFIPFLH EE+ L ++ H V L FT
Sbjct: 202 EIWTNGSLTPKEALHDASRNLIDLFIPFLHMEEDNLYLQDNQHTVPLSPFT 252
[31][TOP]
>UniRef100_Q8S8V9 DNA-directed RNA polymerase subunit alpha n=1 Tax=Atropa belladonna
RepID=RPOA_ATRBE
Length = 337
Score = 273 bits (697), Expect = 7e-72
Identities = 134/171 (78%), Positives = 148/171 (86%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEI+MNLKEIVL+SNLYG +AS+C KGPGYVTAQ+IILPP V IVDNTQHIA++TE
Sbjct: 82 ESVHEIIMNLKEIVLRSNLYGTSEASVCVKGPGYVTAQDIILPPYVEIVDNTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CIGLQIER+RGY I T +NFQDGSY IDA+FMPVRNANHSIHSY NGNEKQEILFL
Sbjct: 142 PIDFCIGLQIERNRGYLIKTPQNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLFIPFLH EE+ L ++ H V L FT
Sbjct: 202 EIWTNGSLTPKEALHEASRNLIDLFIPFLHMEEDNLYLQDNQHTVPLSPFT 252
[32][TOP]
>UniRef100_C3UP04 RNA polymerase alpha subunit n=1 Tax=Megaleranthis saniculifolia
RepID=C3UP04_9MAGN
Length = 328
Score = 272 bits (695), Expect = 1e-71
Identities = 136/171 (79%), Positives = 148/171 (86%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG RDASIC KGPGYVTAQ+II PPSV IVD TQHIA++TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTRDASICVKGPGYVTAQDIISPPSVEIVDITQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCI LQIER+RGYR+ T N Q+ SY IDA+FMPVRNANHSIHSY NGNEKQEILFL
Sbjct: 142 PIDLCIELQIERNRGYRMKTPNNAQERSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWT+GSLTPKEALYEASRNLIDLFIPFLHAEE+ E+ +VTLP FT
Sbjct: 202 EIWTDGSLTPKEALYEASRNLIDLFIPFLHAEEQDTKLEDNQSRVTLPFFT 252
[33][TOP]
>UniRef100_A1XGS0 DNA-directed RNA polymerase subunit alpha n=2 Tax=Ranunculus
macranthus RepID=RPOA_RANMC
Length = 346
Score = 272 bits (695), Expect = 1e-71
Identities = 136/172 (79%), Positives = 147/172 (85%), Gaps = 1/172 (0%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG RDASIC KGPGYVTAQ+II PPSV IVD TQHIA++TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTRDASICVKGPGYVTAQDIISPPSVEIVDTTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
P+ CIGLQIE +RGYR+ T N Q GSY IDA+FMPVRNANHSIHSY NGNE QEILFL
Sbjct: 142 PVDFCIGLQIESNRGYRMKTPNNAQKGSYPIDAVFMPVRNANHSIHSYGNGNENQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNF-ENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEE+ N +N + VTLP FT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEQDQNLKDNQKNGVTLPFFT 253
[34][TOP]
>UniRef100_Q9MTJ3 DNA-directed RNA polymerase subunit alpha n=3 Tax=Oenothera
RepID=RPOA_OENEH
Length = 366
Score = 271 bits (694), Expect = 1e-71
Identities = 134/171 (78%), Positives = 148/171 (86%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG +ASIC KGPG VTAQ+I+LPPSV I+DNTQHIA++ E
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTCNASICVKGPGCVTAQDILLPPSVEIIDNTQHIASLME 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGLQIER+RGY I + NFQDGSY IDA+FMPVRNANHSIHSY N NEKQEILFL
Sbjct: 142 PIHLCIGLQIERNRGYHIKSPNNFQDGSYPIDAVFMPVRNANHSIHSYGNQNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLF+PFLHAEEE L+ + VT PLFT
Sbjct: 202 EIWTNGSLTPKEALHEASRNLIDLFLPFLHAEEENLHLGKNKYNVTFPLFT 252
[35][TOP]
>UniRef100_Q2MI69 DNA-directed RNA polymerase subunit alpha n=1 Tax=Solanum
lycopersicum RepID=RPOA_SOLLC
Length = 337
Score = 271 bits (693), Expect = 2e-71
Identities = 134/171 (78%), Positives = 147/171 (85%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG +ASIC KGPGYVTAQ+IILPP V IVDNTQHIA++TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTSEASICVKGPGYVTAQDIILPPYVEIVDNTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CIGLQIER+RGY I T NFQDGSY IDA+FMPVRNANHSIHSY NGNEKQEILF+
Sbjct: 142 PIDFCIGLQIERNRGYLIKTPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFI 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL++ASRNLIDLFIPFLH EE+ L ++ H V L FT
Sbjct: 202 EIWTNGSLTPKEALHDASRNLIDLFIPFLHMEEDNLYLQDNQHTVPLSPFT 252
[36][TOP]
>UniRef100_A6MM68 DNA-directed RNA polymerase subunit alpha n=1 Tax=Buxus microphylla
RepID=RPOA_BUXMI
Length = 337
Score = 271 bits (693), Expect = 2e-71
Identities = 134/171 (78%), Positives = 148/171 (86%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG RDASIC +GP +VTAQ+II PPSV I+D TQHIA++TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTRDASICVRGPRHVTAQDIISPPSVEIIDTTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGLQIER+RGY + T KN QDG Y IDA+FMPVRNANHSIHSY NGNEKQEILFL
Sbjct: 142 PIDLCIGLQIERNRGYNMKTPKNSQDGRYPIDAVFMPVRNANHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLFIPFLHA EE ++ +KV LPLFT
Sbjct: 202 EIWTNGSLTPKEALHEASRNLIDLFIPFLHANEENFILKDNQNKVALPLFT 252
[37][TOP]
>UniRef100_Q3C1M3 DNA-directed RNA polymerase subunit alpha n=2 Tax=Nicotiana
RepID=RPOA_NICSY
Length = 337
Score = 271 bits (692), Expect = 2e-71
Identities = 135/171 (78%), Positives = 146/171 (85%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEI+L+SNLYG DASIC KGPG VTAQ+IILPP V IVDNTQHIA++TE
Sbjct: 82 ESVHEILMNLKEIILRSNLYGTSDASICVKGPGSVTAQDIILPPYVEIVDNTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CIGLQIER+RGY I T NFQDGSY IDA+FMPVRNANHSIHSY NGNEKQEILFL
Sbjct: 142 PIDFCIGLQIERNRGYLIKTPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLFIPFLH EE+ L ++ H V L FT
Sbjct: 202 EIWTNGSLTPKEALHEASRNLIDLFIPFLHMEEDNLYLQDNQHTVPLSPFT 252
[38][TOP]
>UniRef100_A6MMN9 DNA-directed RNA polymerase subunit alpha n=1 Tax=Dioscorea
elephantipes RepID=RPOA_DIOEL
Length = 337
Score = 271 bits (692), Expect = 2e-71
Identities = 134/171 (78%), Positives = 147/171 (85%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEIL NLKEIVL+SNLY IRDASIC +GP YVTAQ+II PP V IVD TQ+IAN+TE
Sbjct: 82 ESVHEILFNLKEIVLRSNLYEIRDASICVRGPRYVTAQDIISPPYVEIVDTTQYIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCI L+I+RDRGYR+ + N QDGSY IDA+FMPVRNANHSIHSY NGNEKQEILFL
Sbjct: 142 PIDLCIELEIKRDRGYRMKPITNSQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +NFE +K TLP T
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFVPFLHAEEEDINFEENKNKFTLPPLT 252
[39][TOP]
>UniRef100_A8SED5 DNA-directed RNA polymerase subunit alpha n=2 Tax=Ceratophyllum
demersum RepID=RPOA_CERDE
Length = 337
Score = 271 bits (692), Expect = 2e-71
Identities = 134/171 (78%), Positives = 148/171 (86%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG DASIC +GP VTAQ+II PPSV IVD TQHIAN+TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTLDASICVRGPRSVTAQDIISPPSVEIVDTTQHIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGLQIERDRGYR+ T N+QDGSY ID +FMPVRNANHSIHSY NG EKQEILFL
Sbjct: 142 PIDLCIGLQIERDRGYRLKTPNNYQDGSYPIDTVFMPVRNANHSIHSYGNGTEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLI+LFIPFLHAEE+++ E+ + T+PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLINLFIPFLHAEEQEILLEDSENISTVPLFT 252
[40][TOP]
>UniRef100_Q68RX5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Panax ginseng
RepID=RPOA_PANGI
Length = 353
Score = 270 bits (691), Expect = 3e-71
Identities = 136/172 (79%), Positives = 147/172 (85%), Gaps = 1/172 (0%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEI+LKSNLYG DASIC +GPGYVTAQ+II PP V IVDNTQHIA++ E
Sbjct: 82 ESVHEILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKN-FQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILF 162
PI LCIGLQIER+RGY I T N FQDGSY IDA+FMPVRNANHSIHSY NGNEKQEILF
Sbjct: 142 PIDLCIGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILF 201
Query: 161 LEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
LEIWTNGSLTPKEAL++ASRNLIDLFIPFLH EEE L+ + H V LP FT
Sbjct: 202 LEIWTNGSLTPKEALHQASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFT 253
[41][TOP]
>UniRef100_Q33C00 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nicotiana
tomentosiformis RepID=RPOA_NICTO
Length = 337
Score = 270 bits (690), Expect = 4e-71
Identities = 135/171 (78%), Positives = 146/171 (85%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG DASIC KGPGYVTAQ+IILPP V IVDNTQHIA++TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTSDASICVKGPGYVTAQDIILPPYVEIVDNTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I CIGLQI+R+RGY I T NFQDGSY IDA+FMPVRNANHSIHSY NGNEKQEILFL
Sbjct: 142 TIDFCIGLQIKRNRGYLIKTPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLFIPFLH EE+ L ++ H V L FT
Sbjct: 202 EIWTNGSLTPKEALHEASRNLIDLFIPFLHIEEDNLYLQDNQHTVPLSPFT 252
[42][TOP]
>UniRef100_Q0G9T0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Daucus carota
RepID=RPOA_DAUCA
Length = 353
Score = 270 bits (690), Expect = 4e-71
Identities = 135/172 (78%), Positives = 149/172 (86%), Gaps = 1/172 (0%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIVL+SNLYG DASIC +GPGYVTAQ+IILPP V +VDNTQHIA++TE
Sbjct: 82 ESVHDILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQDIILPPYVEVVDNTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKN-FQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILF 162
PI+LCIGLQIER+RGY I T N +DGSY IDA+FMPVRNANHSIHSY NGN+KQEILF
Sbjct: 142 PIELCIGLQIERNRGYLIKTPNNNSKDGSYPIDAVFMPVRNANHSIHSYGNGNDKQEILF 201
Query: 161 LEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
LEIWTNGSLTPKEAL+EASRNLIDLFIPFLH EEE L+ N H V LP FT
Sbjct: 202 LEIWTNGSLTPKEALHEASRNLIDLFIPFLHTEEENLHLANNQHMVPLPPFT 253
[43][TOP]
>UniRef100_P06505 DNA-directed RNA polymerase subunit alpha n=1 Tax=Spinacia oleracea
RepID=RPOA_SPIOL
Length = 335
Score = 269 bits (687), Expect = 9e-71
Identities = 135/171 (78%), Positives = 148/171 (86%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG +ASIC +GP VTAQ+IILPP V IVDNTQHIA++TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTCEASICVRGPRGVTAQDIILPPYVEIVDNTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGLQ+ER+RGY I NFQDGS+ IDA+FMPVRN NHSIHSY NGNEKQEILFL
Sbjct: 142 PIDLCIGLQLERNRGYHIKAPNNFQDGSFPIDALFMPVRNVNHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDL IPFLHA EE +N E+ HKV+LPLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLLIPFLHA-EENVNLEDNQHKVSLPLFT 251
[44][TOP]
>UniRef100_A4QLW5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nasturtium
officinale RepID=RPOA_NASOF
Length = 327
Score = 269 bits (687), Expect = 9e-71
Identities = 130/170 (76%), Positives = 147/170 (86%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNL EIVL+SNLYG R+A IC +GPGY+TA++IILPPSV I+DNTQHIA +TE
Sbjct: 82 ESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPSVEIIDNTQHIATLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGL+IER+RGY + NF+D SY IDA+FMPV+NANHSIHSY NGNEKQEILFL
Sbjct: 142 PIDLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNGSLTPKEAL+EASRNLI+LFIPFLH EEE EN H+VTLPLF
Sbjct: 202 EIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLENNQHQVTLPLF 251
[45][TOP]
>UniRef100_A4QKD7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Barbarea verna
RepID=RPOA_BARVE
Length = 327
Score = 269 bits (687), Expect = 9e-71
Identities = 130/170 (76%), Positives = 147/170 (86%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNL EIVL+SNLYG R+A IC +GPGY+TA++IILPPSV I+DNTQHIA +TE
Sbjct: 82 ESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPSVEIIDNTQHIATLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGL+IER+RGY + NF+D SY IDA+FMPV+NANHSIHSY NGNEKQEILFL
Sbjct: 142 PIDLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNGSLTPKEAL+EASRNLI+LFIPFLH EEE EN H+VTLPLF
Sbjct: 202 EIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLENNQHQVTLPLF 251
[46][TOP]
>UniRef100_A7KVR0 RNA polymerase alpha subunit (Fragment) n=1 Tax=Olea europaea
RepID=A7KVR0_OLEEU
Length = 280
Score = 268 bits (686), Expect = 1e-70
Identities = 135/171 (78%), Positives = 145/171 (84%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG DASIC +GPGYVTAQ+IILPP V IVDNTQHIA++TE
Sbjct: 56 ESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQDIILPPYVEIVDNTQHIASLTE 115
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGLQI+R+RGY I NFQDGSY IDA+FMPVRNANHSIHSY NGNEKQEILFL
Sbjct: 116 PIDLCIGLQIKRNRGYLIKMPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFL 175
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EA RNLIDLFIPFLH EEE L E+ H V L T
Sbjct: 176 EIWTNGSLTPKEALHEACRNLIDLFIPFLHKEEENLPLEDNQHTVPLSPLT 226
[47][TOP]
>UniRef100_Q9XQN8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Sinapis alba
RepID=RPOA_SINAL
Length = 327
Score = 268 bits (686), Expect = 1e-70
Identities = 130/170 (76%), Positives = 146/170 (85%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNL EIVLKSNLYG R+ IC +GPGY+TA++IILPPSV IVDNTQHIA +TE
Sbjct: 82 ESVHEILMNLNEIVLKSNLYGTRNPFICVQGPGYITARDIILPPSVEIVDNTQHIATLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGL+IER+RGY + NF+D SY IDA+FMPV+NANHSIHSY NGNEKQEILF+
Sbjct: 142 PINLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEKQEILFI 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNGSLTPKEALYEASRNLI+LFIPFLH EEE EN H+VTLP+F
Sbjct: 202 EIWTNGSLTPKEALYEASRNLINLFIPFLHVEEETFYLENNQHQVTLPVF 251
[48][TOP]
>UniRef100_A6MMX6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Illicium
oligandrum RepID=RPOA_ILLOL
Length = 331
Score = 268 bits (686), Expect = 1e-70
Identities = 132/171 (77%), Positives = 147/171 (85%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIV +S+LYG R ASIC +GP YVTAQ+II PPSV IVD TQ+IA++TE
Sbjct: 82 ESVHEILMNLKEIVFRSHLYGTRGASICVRGPRYVTAQDIISPPSVKIVDTTQYIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCI LQIERDRGYRI T N+QDGSY IDA+ MPVRNANHSIHSY NGNEKQEILFL
Sbjct: 142 PIDLCIELQIERDRGYRIKTPNNYQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGS TPKEALYEASRNLIDLF+PFLHAEE+ +N E+ ++ T PLFT
Sbjct: 202 EIWTNGSFTPKEALYEASRNLIDLFLPFLHAEEQDINVEDNQNRATAPLFT 252
[49][TOP]
>UniRef100_Q0G9I7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Liriodendron
tulipifera RepID=RPOA_LIRTU
Length = 337
Score = 268 bits (685), Expect = 2e-70
Identities = 133/171 (77%), Positives = 149/171 (87%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+S+LYG RDASIC +GP YVTAQ+II PPSV IVD TQHIA++TE
Sbjct: 82 ESVHEILMNLKEIVLRSHLYGTRDASICVRGPRYVTAQDIIPPPSVEIVDTTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCI LQIERDRGYR+ T N+QDGSY IDA+ MPVRNANHSIHSY N NEKQEILFL
Sbjct: 142 PIDLCIELQIERDRGYRMKTPNNYQDGSYPIDAVSMPVRNANHSIHSYGNRNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEE+ + E+ ++ T+PLFT
Sbjct: 202 EIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDIVLEDNPNRFTVPLFT 252
[50][TOP]
>UniRef100_A4QLD8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lepidium
virginicum RepID=RPOA_LEPVR
Length = 327
Score = 268 bits (685), Expect = 2e-70
Identities = 130/170 (76%), Positives = 146/170 (85%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNL EIVL+SNLYG R+A IC +GPGY+TAQ+IILPPSV I+DNTQHIA + E
Sbjct: 82 ESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITAQDIILPPSVEIIDNTQHIATLME 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGL+IER+RGY + NF+D SY IDA+FMPV+NANHSIHSY NGNEKQEILFL
Sbjct: 142 PIDLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNGSLTPKEAL+EASRNLI+LFIPFLH EEE EN H+VTLPLF
Sbjct: 202 EIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLENNQHQVTLPLF 251
[51][TOP]
>UniRef100_A4QLM6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lobularia
maritima RepID=RPOA_LOBMA
Length = 327
Score = 267 bits (683), Expect = 3e-70
Identities = 130/170 (76%), Positives = 146/170 (85%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNL EIVL+SNLYG R+A IC +GPGY+TAQ+IILPPSV I+DNTQHIA +TE
Sbjct: 82 ESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITAQDIILPPSVEIIDNTQHIATLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCI L+IER+RGY + NF+D SY IDA+FMPV+NANHSIHSY NGNEKQEILFL
Sbjct: 142 PIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNGSLTPKEAL+EASRNLI+LFIPFLH EEE EN H+VTLPLF
Sbjct: 202 EIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLENNQHQVTLPLF 251
[52][TOP]
>UniRef100_A7Y3I1 DNA-directed RNA polymerase subunit alpha n=1 Tax=Ipomoea purpurea
RepID=RPOA_IPOPU
Length = 337
Score = 267 bits (683), Expect = 3e-70
Identities = 133/167 (79%), Positives = 145/167 (86%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG DASIC KGPG VTA++IILPPSV IVDNTQHIA +TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTCDASICVKGPGCVTAEDIILPPSVEIVDNTQHIAWLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CIGLQIER+RGY + T NF+DGSY IDA+FMPVRNANHSIHSY NGNEKQEILFL
Sbjct: 142 PIDFCIGLQIERNRGYILKTHHNFEDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTL 18
EIWTNGSLTPKEAL+EASRNLIDLFIPFLH EEE L+ E+ H + L
Sbjct: 202 EIWTNGSLTPKEALHEASRNLIDLFIPFLHMEEENLHLEDGEHTIPL 248
[53][TOP]
>UniRef100_A4QL51 DNA-directed RNA polymerase subunit alpha n=1 Tax=Draba nemorosa
RepID=RPOA_DRANE
Length = 327
Score = 266 bits (679), Expect = 8e-70
Identities = 130/170 (76%), Positives = 146/170 (85%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNL EIVL+SNLYG R+A IC +GPGY+TA++IILPPSV IVDNTQHIA VTE
Sbjct: 82 ESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPSVEIVDNTQHIATVTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I LCIGL+IER+RGY + NF+D SY IDA+FMPV+NANHSIHSY NGN KQEILFL
Sbjct: 142 SIDLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNGKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNGSLTPKEAL+EASRNLI+LFIPFLH EEE + EN H+VTLPLF
Sbjct: 202 EIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFHLENNQHQVTLPLF 251
[54][TOP]
>UniRef100_Q09ME5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Citrus sinensis
RepID=RPOA_CITSI
Length = 328
Score = 266 bits (679), Expect = 8e-70
Identities = 135/172 (78%), Positives = 147/172 (85%), Gaps = 1/172 (0%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLK+IVL+SNLYG DA IC KGPGYVTAQ+I+LPPSV IVDNTQHIA++TE
Sbjct: 82 ESVHEILMNLKDIVLRSNLYGTCDALICVKGPGYVTAQDILLPPSVEIVDNTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGS-YNIDAIFMPVRNANHSIHSYVNGNEKQEILF 162
PI L IGLQIER RGY I T FQDG+ Y IDA+FMPVRNANHSI SY NGNEKQEILF
Sbjct: 142 PIDLSIGLQIERSRGYNIKTPNTFQDGNCYPIDAVFMPVRNANHSIQSYGNGNEKQEILF 201
Query: 161 LEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
LEIWTNGSLTPKEAL+EASR+LIDLFIPFL AE+E L EN +KVTLP FT
Sbjct: 202 LEIWTNGSLTPKEALHEASRSLIDLFIPFLQAEDENLPLENNQYKVTLPFFT 253
[55][TOP]
>UniRef100_Q4FG99 RNA polymerase alpha chain (Fragment) n=1 Tax=Yucca schidigera
RepID=Q4FG99_9ASPA
Length = 337
Score = 265 bits (678), Expect = 1e-69
Identities = 135/171 (78%), Positives = 146/171 (85%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEI +NLKEIVL NLYG+RDASIC +GP YVTAQ+II PPSV IVD TQHIAN+TE
Sbjct: 82 ESVHEIFINLKEIVL--NLYGVRDASICVRGPRYVTAQDIISPPSVEIVDTTQHIANLTE 139
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI L I LQI+RDRGYRIN N QDGSY IDA+ MPVRNANHSIHSY NGNEKQEILFL
Sbjct: 140 PIDLRIELQIKRDRGYRINPTNNSQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFL 199
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEE ++FE ++ TLPLFT
Sbjct: 200 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFEENKNRFTLPLFT 250
[56][TOP]
>UniRef100_Q06GM8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Piper cenocladum
RepID=RPOA_PIPCE
Length = 339
Score = 265 bits (678), Expect = 1e-69
Identities = 132/171 (77%), Positives = 147/171 (85%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEI+MNLKEIVL+SNLYG DASIC +GP YVTAQ+IILPPSV IVD TQHIAN+TE
Sbjct: 82 ESVHEIVMNLKEIVLRSNLYGTLDASICIRGPRYVTAQDIILPPSVEIVDATQHIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
+ LCI LQIERDRGY + T N +DGSY IDAIFMPVRNANHS+HSY NGNEKQEILF+
Sbjct: 142 RVDLCIKLQIERDRGYSMKTPHNDEDGSYPIDAIFMPVRNANHSVHSYGNGNEKQEILFI 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEE +++ E+ + V L LFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEREIHLEDNANGVPLALFT 252
[57][TOP]
>UniRef100_A4QKW3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Crucihimalaya
wallichii RepID=RPOA_CRUWA
Length = 327
Score = 265 bits (678), Expect = 1e-69
Identities = 129/170 (75%), Positives = 145/170 (85%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNL EIVL+SNLYG R+A IC +GPGY+TA++IILPPSV IVDNTQHIA +TE
Sbjct: 82 ESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPSVEIVDNTQHIATLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGL+IER+RGY + N +D SY IDA+FMPV+NANHSIHSY NGNEKQEILFL
Sbjct: 142 PIDLCIGLKIERNRGYSLKISNNLEDRSYPIDAVFMPVQNANHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNGSLTPKEAL+EASRNLI+LFIPFLH EEE EN H+VTLP F
Sbjct: 202 EIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLENNQHQVTLPFF 251
[58][TOP]
>UniRef100_A4QJW3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Olimarabidopsis
pumila RepID=RPOA_OLIPU
Length = 327
Score = 265 bits (676), Expect = 2e-69
Identities = 128/170 (75%), Positives = 146/170 (85%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNL EIVL+SNLYG R+A IC +GPGY+TA++IILPPSV I+DNTQHIA +TE
Sbjct: 82 ESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPSVEIIDNTQHIATLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCI L+IER+RGY + NF+D SY IDA+FMPV+NANHSIHSY NGNEKQEILFL
Sbjct: 142 PIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNGSLTPKEAL+EASRNLI+LFIPFLH EEE + EN H+VTLP F
Sbjct: 202 EIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETVYLENNQHQVTLPFF 251
[59][TOP]
>UniRef100_A9L9C8 RNA polymerase alpha subunit n=1 Tax=Lemna minor RepID=A9L9C8_LEMMI
Length = 284
Score = 264 bits (675), Expect = 2e-69
Identities = 131/171 (76%), Positives = 146/171 (85%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG R+ASIC KGP +TA++IILP SV IVD TQHIA +TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTREASICVKGPKTITAEDIILPASVEIVDTTQHIATLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
P+ L IGLQI+RDRGYR+ N QDGSY IDA+FMPVRNANHSI+SY NGNEKQEILFL
Sbjct: 142 PLDLYIGLQIQRDRGYRMRPTNNSQDGSYPIDAVFMPVRNANHSIYSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEE+ +N E + TLPLFT
Sbjct: 202 EIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEKDINLEENKSRFTLPLFT 252
[60][TOP]
>UniRef100_A4QKM4 DNA-directed RNA polymerase subunit alpha n=1 Tax=Capsella
bursa-pastoris RepID=RPOA_CAPBU
Length = 327
Score = 264 bits (675), Expect = 2e-69
Identities = 128/170 (75%), Positives = 145/170 (85%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNL EIVL+SNLYG R+A IC +GPGY+TA++IILPPSV I+DNTQHIA +TE
Sbjct: 82 ESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPSVEIIDNTQHIATLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCI L+IER+RGY + NF+D SY IDA+FMPV+NANHSIHSY NGNEKQEILFL
Sbjct: 142 PIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNGSLTPKEAL+EASRNLI+LFIPFLH EEE EN H+VTLP F
Sbjct: 202 EIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLENNQHQVTLPFF 251
[61][TOP]
>UniRef100_Q7YJU6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Calycanthus
floridus var. glaucus RepID=RPOA_CALFG
Length = 340
Score = 264 bits (675), Expect = 2e-69
Identities = 134/173 (77%), Positives = 148/173 (85%), Gaps = 2/173 (1%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVLKSNLYG RDASIC +GP YVTAQ+II PPSV IVD TQHIA++TE
Sbjct: 82 ESVHEILMNLKEIVLKSNLYGTRDASICVRGPKYVTAQDIISPPSVEIVDTTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCI LQIERDRGYR+ N+QDGSY IDA+ MPVRNANHSIHSY +GNEKQEILFL
Sbjct: 142 PINLCIELQIERDRGYRMKAPNNYQDGSYPIDAVSMPVRNANHSIHSYGSGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEE--KLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEE+ LN E+ ++ T+ FT
Sbjct: 202 EIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDIHLNLEDNQNRFTVSPFT 254
[62][TOP]
>UniRef100_A9QC95 RNA polymerase alpha subunit (Fragment) n=1 Tax=Trachelium
caeruleum RepID=A9QC95_TRACE
Length = 337
Score = 264 bits (674), Expect = 3e-69
Identities = 128/163 (78%), Positives = 143/163 (87%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG DA+IC KGPGYVTAQ+II PP V I+DNTQHIA++TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTCDAAICVKGPGYVTAQDIISPPYVEIIDNTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI+LCIGLQIER+RGY I T KNFQDGSY IDA+FMPVRN NHSI+SY GN+K EILFL
Sbjct: 142 PIELCIGLQIERNRGYLIKTAKNFQDGSYPIDAVFMPVRNVNHSIYSYGTGNDKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXH 30
EIWTNGSLTPKEAL+EA+RNLIDLFIPFLH EEE L+ E+ H
Sbjct: 202 EIWTNGSLTPKEALHEAARNLIDLFIPFLHTEEENLDLEDNQH 244
[63][TOP]
>UniRef100_Q09FS9 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nandina domestica
RepID=RPOA_NANDO
Length = 338
Score = 263 bits (673), Expect = 4e-69
Identities = 131/171 (76%), Positives = 147/171 (85%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG DASIC KGP +TA++II PPSV IVD TQHIA++TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTCDASICVKGPINITAKDIISPPSVEIVDTTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
P LCIGLQIER+RGYR+ T Q+GSY IDA+FMPVRNANHSIHSY NGNEKQEILFL
Sbjct: 142 PFDLCIGLQIERNRGYRMKTPNKAQNGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEE+ + E+ ++VTLP FT
Sbjct: 202 EIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDIILEDNQNRVTLPFFT 252
[64][TOP]
>UniRef100_A6MMF4 DNA-directed RNA polymerase subunit alpha n=1 Tax=Chloranthus
spicatus RepID=RPOA_CHLSC
Length = 334
Score = 263 bits (672), Expect = 5e-69
Identities = 128/171 (74%), Positives = 146/171 (85%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E +HEI MNLKEIVL+SNLYG R+ASIC +GP YVTAQ+II PPSV IVD TQHIA++TE
Sbjct: 82 ESIHEIFMNLKEIVLRSNLYGTRNASICVRGPRYVTAQDIISPPSVEIVDTTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCI LQI+RDRGYR+ T +Q+GSY IDA+ MPVRNANHSIHSY NGNEKQEILFL
Sbjct: 142 PIDLCIELQIQRDRGYRMKTPNKYQNGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEE + E+ ++ +P FT
Sbjct: 202 EIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEEGIRLEDNPNRFNIPFFT 252
[65][TOP]
>UniRef100_A4QJE7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Aethionema
cordifolium RepID=RPOA_AETCO
Length = 333
Score = 263 bits (671), Expect = 7e-69
Identities = 128/170 (75%), Positives = 146/170 (85%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNL+EIVL+SNLYG +A IC +GPG +TA++IILPPSV I+DNTQHIA +TE
Sbjct: 82 ESVHEILMNLQEIVLRSNLYGTCNALICVQGPGSITARDIILPPSVEIIDNTQHIATLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGLQIER+RGY + +F+DGSY IDA+FMPV+NANHSIHSY GNEKQEILFL
Sbjct: 142 PIDLCIGLQIERNRGYSLKMPNHFEDGSYPIDALFMPVQNANHSIHSYGTGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNG+LTPKEAL+EASRNLI+LFIPFLH EEE EN HKVTLPLF
Sbjct: 202 EIWTNGNLTPKEALHEASRNLINLFIPFLHVEEETFYLENNQHKVTLPLF 251
[66][TOP]
>UniRef100_A9QAY1 RNA polymerase alpha subunit (Fragment) n=1 Tax=Anethum graveolens
RepID=A9QAY1_9APIA
Length = 338
Score = 262 bits (670), Expect = 9e-69
Identities = 134/174 (77%), Positives = 148/174 (85%), Gaps = 3/174 (1%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIVL+SNLYG DASIC +GPGYVTAQ+IILPP V +VDNTQHIA++TE
Sbjct: 82 ESVHDILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQDIILPPYVEVVDNTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINT-LKNFQDGSYNIDAIFMPVRNANHSIHSY--VNGNEKQEI 168
PI+L IGLQIER RGY I T NFQDGSY IDA+FMP+RNANHSIHSY NGN+KQEI
Sbjct: 142 PIELHIGLQIERSRGYLIKTPNNNFQDGSYPIDAVFMPIRNANHSIHSYGNGNGNDKQEI 201
Query: 167 LFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
LFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLH EEE L+ + H V LP FT
Sbjct: 202 LFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHTEEENLHLADNQHMVPLPPFT 255
[67][TOP]
>UniRef100_A0A367 DNA-directed RNA polymerase subunit alpha n=1 Tax=Coffea arabica
RepID=RPOA_COFAR
Length = 335
Score = 262 bits (670), Expect = 9e-69
Identities = 129/170 (75%), Positives = 144/170 (84%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIV +SNLYG DASIC +GPGYVTAQ+I+LPP V IVDNTQHIA + E
Sbjct: 82 ESVHEILMNLKEIVFRSNLYGTCDASICVRGPGYVTAQDIVLPPYVEIVDNTQHIARLME 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCI L+IER+RGY I T +NFQDGSY IDA+FMP+RNAN+SIHSY NGNEKQEILFL
Sbjct: 142 PINLCIRLEIERNRGYLIKTPQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNGSLTPKEAL++ASRNLIDLFIPFLH EE+ + EN H V L F
Sbjct: 202 EIWTNGSLTPKEALHQASRNLIDLFIPFLHMEEQNSHLENNQHTVPLAPF 251
[68][TOP]
>UniRef100_A4QK50 DNA-directed RNA polymerase subunit alpha n=1 Tax=Arabis hirsuta
RepID=RPOA_ARAHI
Length = 337
Score = 262 bits (670), Expect = 9e-69
Identities = 128/170 (75%), Positives = 144/170 (84%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNL EIVL+SNLYG R+A IC +GPGY+TA++IILPPSV I+DNTQHIA +TE
Sbjct: 82 ESVHEILMNLNEIVLRSNLYGARNAIICVQGPGYITARDIILPPSVEIIDNTQHIATLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I LCIGL+IER+RGY + L F+D SY IDA+FMPV+NANHSIHSY NGN KQEILFL
Sbjct: 142 SIDLCIGLKIERNRGYSLKILNTFEDRSYPIDAVFMPVQNANHSIHSYGNGNGKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNGSLTPKEAL+EASRNLI+LFIPFLH EEE EN H VTLPLF
Sbjct: 202 EIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLENNQHHVTLPLF 251
[69][TOP]
>UniRef100_B2XWQ5 RNA polymerase alpha subunit n=1 Tax=Fagopyrum esculentum subsp.
ancestrale RepID=B2XWQ5_FAGEA
Length = 337
Score = 261 bits (668), Expect = 2e-68
Identities = 131/170 (77%), Positives = 143/170 (84%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+S YG DASIC +GPG VTAQ+II PP V IVD TQHIAN+TE
Sbjct: 82 ESVHEILMNLKEIVLRSTFYGTCDASICVRGPGGVTAQDIISPPYVEIVDTTQHIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI L I LQ+ER+RGYRI T NFQDGSY ID +FMPVRN NHSIHSY NGNEKQEILFL
Sbjct: 142 PIDLRIELQLERNRGYRIKTPNNFQDGSYPIDVVFMPVRNVNHSIHSYSNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNGSLTPKEALYEASRNLIDLFIPFL+AE+E + E+ +VTLPLF
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFIPFLYAEKENFHLEDNQDRVTLPLF 251
[70][TOP]
>UniRef100_P56762 DNA-directed RNA polymerase subunit alpha n=1 Tax=Arabidopsis
thaliana RepID=RPOA_ARATH
Length = 329
Score = 261 bits (668), Expect = 2e-68
Identities = 126/170 (74%), Positives = 144/170 (84%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNL EIVL+SNLYG R+A IC +GPGY+TA++IILPP+V I+DNTQHIA +TE
Sbjct: 82 ESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHIATLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCI L+IER+RGY + NF+D SY IDA+FMPV NANHSIHSY NGNEKQEILFL
Sbjct: 142 PIDLCIELKIERNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNGSLTPKEAL++ASRNLI+LFIPFLH EEE EN H+VTLP F
Sbjct: 202 EIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFF 251
[71][TOP]
>UniRef100_Q3BAK5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Phalaenopsis
aphrodite subsp. formosana RepID=RPOA_PHAAO
Length = 337
Score = 260 bits (665), Expect = 3e-68
Identities = 126/171 (73%), Positives = 146/171 (85%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEIL+NLK+IVL+SNLYG+R+ASIC +GP Y+TAQ+II PPSV IVD TQHIAN+TE
Sbjct: 82 ESVHEILLNLKDIVLRSNLYGVRNASICVRGPKYITAQDIISPPSVEIVDTTQHIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCI LQI+RDRGYR+ + + DGSY ID + MPVRNANHSIHSY NGNEKQEILF+
Sbjct: 142 PINLCIELQIKRDRGYRMKSTNDSHDGSYPIDIVSMPVRNANHSIHSYGNGNEKQEILFI 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDL IPFLHAEEE +NF+ ++ LP F+
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLLIPFLHAEEEDMNFKENENRWNLPPFS 252
[72][TOP]
>UniRef100_B0FIU6 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta japonica
RepID=B0FIU6_CUSJA
Length = 332
Score = 259 bits (663), Expect = 6e-68
Identities = 132/171 (77%), Positives = 146/171 (85%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG DASI FKGPGYVTA++IILPP V IVD+TQHIA +TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTCDASISFKGPGYVTAEDIILPPHVEIVDSTQHIAWLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGL+IER+RGY I T NF+DGSY IDA+FMPV+NANHSIHSY GNEKQEILFL
Sbjct: 142 PIDLCIGLKIERNRGYFIKTHANFEDGSYPIDAVFMPVQNANHSIHSY--GNEKQEILFL 199
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLFIPFLH E+E L E+ H + L FT
Sbjct: 200 EIWTNGSLTPKEALHEASRNLIDLFIPFLHMEKENLPLEDADHTIPLSPFT 250
[73][TOP]
>UniRef100_Q49CA2 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cuscuta japonica
RepID=RPOA_CUSJA
Length = 332
Score = 259 bits (663), Expect = 6e-68
Identities = 132/171 (77%), Positives = 146/171 (85%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG DASI FKGPGYVTA++IILPP V IVD+TQHIA +TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTCDASISFKGPGYVTAEDIILPPHVEIVDSTQHIAWLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGL+IER+RGY I T NF+DGSY IDA+FMPV+NANHSIHSY GNEKQEILFL
Sbjct: 142 PIDLCIGLKIERNRGYFIKTHANFEDGSYPIDAVFMPVQNANHSIHSY--GNEKQEILFL 199
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLFIPFLH E+E L E+ H + L FT
Sbjct: 200 EIWTNGSLTPKEALHEASRNLIDLFIPFLHMEKENLPLEDADHTIPLSPFT 250
[74][TOP]
>UniRef100_A4QJN1 DNA-directed RNA polymerase subunit alpha n=1 Tax=Aethionema
grandiflorum RepID=RPOA_AETGR
Length = 333
Score = 259 bits (661), Expect = 1e-67
Identities = 127/170 (74%), Positives = 144/170 (84%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNL+EIVL+SNLYG +A IC +GPGY+TA++IILPPSV I+DNTQHIA +TE
Sbjct: 82 ESVHEILMNLQEIVLRSNLYGTCNALICVQGPGYITARDIILPPSVEIMDNTQHIATLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGLQIER+RGY + F+DGSY IDA+FMPV+NANHSIHSY GNE QEILFL
Sbjct: 142 PIDLCIGLQIERNRGYSLKMPNPFEDGSYPIDALFMPVQNANHSIHSYGTGNENQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNG+LTPKEAL+EASRNLI+LFIPFLH EEE EN KVTLPLF
Sbjct: 202 EIWTNGNLTPKEALHEASRNLINLFIPFLHVEEETFYLENNEDKVTLPLF 251
[75][TOP]
>UniRef100_C7SM26 RNA polymerase alpha subunit n=1 Tax=Joinvillea plicata
RepID=C7SM26_9POAL
Length = 339
Score = 258 bits (660), Expect = 1e-67
Identities = 130/171 (76%), Positives = 142/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+II PPSV IVD TQHIAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIISPPSVEIVDTTQHIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCI LQI+RDRGY KN QDGSY IDA+ MPVRN N+SI+S N NEK EILFL
Sbjct: 142 PIDLCIELQIKRDRGYHTEPRKNSQDGSYPIDAVSMPVRNVNYSIYSCGNENEKYEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEE NFE ++ TLPL T
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEDTNFEENKNRFTLPLLT 252
[76][TOP]
>UniRef100_A8W3F3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cuscuta exaltata
RepID=RPOA_CUSEX
Length = 335
Score = 258 bits (660), Expect = 1e-67
Identities = 131/171 (76%), Positives = 146/171 (85%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEI MNLKEIVL+SNLYG DASI KGPG+VTA++IILPP V IVD+TQHIA +TE
Sbjct: 82 ESVHEIFMNLKEIVLRSNLYGTCDASISIKGPGHVTAKDIILPPHVEIVDSTQHIAWLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGL+IER+RGY I T NF+DGSY IDA+FMPVRNANHSIHSY GNEKQEILFL
Sbjct: 142 PIDLCIGLKIERNRGYFIKTHPNFEDGSYPIDAVFMPVRNANHSIHSY--GNEKQEILFL 199
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLFIPFLH EEE L+ E+ H ++L FT
Sbjct: 200 EIWTNGSLTPKEALHEASRNLIDLFIPFLHMEEENLHLEDADHTISLSPFT 250
[77][TOP]
>UniRef100_Q4FGA2 RNA polymerase alpha chain (Fragment) n=1 Tax=Nuphar advena
RepID=Q4FGA2_NUPAD
Length = 336
Score = 258 bits (659), Expect = 2e-67
Identities = 127/171 (74%), Positives = 144/171 (84%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLK+IV +S+LYG DASIC +GP +VTAQ+II PPSV IVD TQHIA +TE
Sbjct: 82 ESVHEILMNLKKIVFRSDLYGTLDASICVRGPRHVTAQDIISPPSVEIVDTTQHIAILTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
P+ LCI L+IER RGY + T N+QDGSY IDA+ MPVRNANHSIHSY NGNEKQEILFL
Sbjct: 142 PVDLCIELKIERGRGYCMRTPNNYQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEE+ +N E+ + T+P FT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEQDINIEDNLKRATVPFFT 252
[78][TOP]
>UniRef100_Q332U5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lactuca sativa
RepID=RPOA_LACSA
Length = 335
Score = 258 bits (659), Expect = 2e-67
Identities = 130/171 (76%), Positives = 143/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG +ASIC +GPGYVTAQ+IILPP V I+DNTQHIA++TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTCEASICVRGPGYVTAQDIILPPYVEILDNTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI+L IGLQIE++RGY I FQDGSY ID +FMPVRNANHSIHSY NGN +EILFL
Sbjct: 142 PIELVIGLQIEKNRGYLIKAPNTFQDGSYPIDPVFMPVRNANHSIHSYENGN--KEILFL 199
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDL IPFLH +EE LN E H V LP FT
Sbjct: 200 EIWTNGSLTPKEALYEASRNLIDLLIPFLHTKEENLNLEGNQHMVPLPPFT 250
[79][TOP]
>UniRef100_Q06RA0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Jasminum
nudiflorum RepID=RPOA_JASNU
Length = 355
Score = 258 bits (658), Expect = 2e-67
Identities = 130/171 (76%), Positives = 141/171 (82%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMN KEIVL+SNLYG DASIC +GPGYVTAQ+IILPP V IVDNTQHIA++TE
Sbjct: 82 ESVHEILMNFKEIVLRSNLYGTCDASICVRGPGYVTAQDIILPPYVEIVDNTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGLQIER+RGY + N QDGSY IDA+FMPVRNANHSIHSY +GNEK EILFL
Sbjct: 142 PIDLCIGLQIERNRGYLMKMPHNSQDGSYPIDAVFMPVRNANHSIHSYGSGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EA RNLIDLFIPFLH EEE E+ H V L T
Sbjct: 202 EIWTNGSLTPKEALHEACRNLIDLFIPFLHKEEETSPLEDNHHTVPLSPLT 252
[80][TOP]
>UniRef100_B2LMM5 RNA polymerase alpha subunit n=1 Tax=Guizotia abyssinica
RepID=B2LMM5_GUIAB
Length = 335
Score = 257 bits (657), Expect = 3e-67
Identities = 130/171 (76%), Positives = 144/171 (84%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG +ASIC +GPGYVTAQ+IILPP V IVDNTQHIA++TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTYEASICVRGPGYVTAQDIILPPYVEIVDNTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI+L IGLQIE++RGY I FQDGSY ID +FMPVRNANHSIHSY NGN +EILFL
Sbjct: 142 PIELVIGLQIEKNRGYLIKAPNTFQDGSYPIDPVFMPVRNANHSIHSYENGN--KEILFL 199
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDL IPFLH +EE LN E+ H V LP FT
Sbjct: 200 EIWTNGSLTPKEALHEASRNLIDLLIPFLHTKEENLNLEDNQHIVPLPPFT 250
[81][TOP]
>UniRef100_Q4QZ04 DNA-directed RNA polymerase alpha chain n=1 Tax=Chrysanthemum x
morifolium RepID=Q4QZ04_CHRMO
Length = 335
Score = 257 bits (656), Expect = 4e-67
Identities = 129/171 (75%), Positives = 143/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG +ASIC +GPGYVTAQ+IILPP V IVDNTQHIA +TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTCEASICVRGPGYVTAQDIILPPYVEIVDNTQHIATLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI+L IGLQIE++RGY I FQDGSY ID +FMPVRNANHSIHSY NGN +EILFL
Sbjct: 142 PIELVIGLQIEKNRGYLIKAPNTFQDGSYPIDPVFMPVRNANHSIHSYENGN--KEILFL 199
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDL IPFLH +EE LN E+ H + LP FT
Sbjct: 200 EIWTNGSLTPKEALHEASRNLIDLLIPFLHTKEENLNLEDNQHMIPLPPFT 250
[82][TOP]
>UniRef100_P92389 DNA-directed RNA polymerase subunit alpha n=1 Tax=Heteranthelium
piliferum RepID=RPOA_HETPI
Length = 339
Score = 256 bits (655), Expect = 5e-67
Identities = 127/171 (74%), Positives = 143/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPKYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ +KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELIKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 252
[83][TOP]
>UniRef100_Q3Y512 RNA polymerase subunit a n=1 Tax=Elymus dentatus RepID=Q3Y512_9POAL
Length = 339
Score = 255 bits (652), Expect = 1e-66
Identities = 127/171 (74%), Positives = 142/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICIKGPRYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 252
[84][TOP]
>UniRef100_A7QC74 Chromosome chr10 scaffold_76, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QC74_VITVI
Length = 310
Score = 255 bits (652), Expect = 1e-66
Identities = 131/171 (76%), Positives = 142/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG R A IC +GPGYVTAQ+II PPSV IVDNTQHIA + E
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTRGAFICARGPGYVTAQDIISPPSVEIVDNTQHIARLME 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGLQIER+RGY +GSY IDA+FMPVRNANHSIHSY NG+E+QEILFL
Sbjct: 142 PIDLCIGLQIERNRGY---------NGSYPIDAVFMPVRNANHSIHSYGNGSERQEILFL 192
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEE L+ E HK TLP T
Sbjct: 193 EIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEETLHLEYNQHKGTLPPLT 243
[85][TOP]
>UniRef100_P93993 DNA-directed RNA polymerase subunit alpha n=1 Tax=Australopyrum
velutinum RepID=RPOA_AUSVE
Length = 339
Score = 255 bits (652), Expect = 1e-66
Identities = 127/171 (74%), Positives = 142/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVXMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 252
[86][TOP]
>UniRef100_Q7H6H4 RNA polymerase alpha subunit n=1 Tax=Elymus virginicus
RepID=Q7H6H4_9POAL
Length = 339
Score = 255 bits (651), Expect = 1e-66
Identities = 127/171 (74%), Positives = 142/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 252
[87][TOP]
>UniRef100_Q539W0 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys fragilis
subsp. secaliformis RepID=Q539W0_PSAFR
Length = 339
Score = 255 bits (651), Expect = 1e-66
Identities = 127/171 (74%), Positives = 142/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 252
[88][TOP]
>UniRef100_Q539V4 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys caduca
RepID=Q539V4_9POAL
Length = 339
Score = 255 bits (651), Expect = 1e-66
Identities = 127/171 (74%), Positives = 142/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 252
[89][TOP]
>UniRef100_Q7H6F6 DNA-directed RNA polymerase subunit alpha n=9 Tax=Triticeae
RepID=RPOA_PSAJU
Length = 339
Score = 255 bits (651), Expect = 1e-66
Identities = 127/171 (74%), Positives = 142/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 252
[90][TOP]
>UniRef100_P92418 DNA-directed RNA polymerase subunit alpha n=1 Tax=Psathyrostachys
fragilis RepID=RPOA_PSAFR
Length = 339
Score = 255 bits (651), Expect = 1e-66
Identities = 127/171 (74%), Positives = 142/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 252
[91][TOP]
>UniRef100_A8Y9B8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lolium perenne
RepID=RPOA_LOLPR
Length = 341
Score = 255 bits (651), Expect = 1e-66
Identities = 127/171 (74%), Positives = 143/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD +Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTSQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIELQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 252
[92][TOP]
>UniRef100_Q1KXS7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Helianthus annuus
RepID=RPOA_HELAN
Length = 335
Score = 255 bits (651), Expect = 1e-66
Identities = 129/171 (75%), Positives = 144/171 (84%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG +ASIC +GPGYVTAQ+IILPP V IVDNTQHIA++TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTCEASICVRGPGYVTAQDIILPPYVEIVDNTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI+L IGLQIE++RGY I FQDGSY ID +FMPVRNANHSIHSY NGN +EILFL
Sbjct: 142 PIELVIGLQIEKNRGYLIKAPNTFQDGSYPIDPVFMPVRNANHSIHSYENGN--KEILFL 199
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDL IPFLH +EE L+ E+ H V LP FT
Sbjct: 200 EIWTNGSLTPKEALHEASRNLIDLLIPFLHTKEENLSLEDNQHIVPLPPFT 250
[93][TOP]
>UniRef100_P93956 DNA-directed RNA polymerase subunit alpha n=2 Tax=Triticeae
RepID=RPOA_FESSE
Length = 339
Score = 255 bits (651), Expect = 1e-66
Identities = 127/171 (74%), Positives = 142/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 252
[94][TOP]
>UniRef100_P93974 DNA-directed RNA polymerase subunit alpha n=2 Tax=Eremopyrum
RepID=RPOA_EREDI
Length = 339
Score = 255 bits (651), Expect = 1e-66
Identities = 127/171 (74%), Positives = 142/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 252
[95][TOP]
>UniRef100_Q8MAI9 DNA-directed RNA polymerase subunit alpha n=1 Tax=Leymus
californicus RepID=RPOA_ELYCL
Length = 339
Score = 255 bits (651), Expect = 1e-66
Identities = 127/171 (74%), Positives = 142/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 252
[96][TOP]
>UniRef100_Q7H6I5 DNA-directed RNA polymerase subunit alpha n=22 Tax=Triticeae
RepID=RPOA_ELYCA
Length = 339
Score = 255 bits (651), Expect = 1e-66
Identities = 127/171 (74%), Positives = 142/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 252
[97][TOP]
>UniRef100_Q06GW5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Drimys
granadensis RepID=RPOA_DRIGR
Length = 339
Score = 255 bits (651), Expect = 1e-66
Identities = 130/173 (75%), Positives = 145/173 (83%), Gaps = 2/173 (1%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIVL+SNLYG DASI +GP VTAQ+II PPSV +VD TQHIA++TE
Sbjct: 82 ESVHQILMNLKEIVLRSNLYGTCDASIFVRGPRCVTAQDIISPPSVKMVDTTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNI--DAIFMPVRNANHSIHSYVNGNEKQEIL 165
PI LCIGLQIERDRGYR+ T N QDGSY I +A+ MPVRNANHSIHSY NGNEKQEIL
Sbjct: 142 PIDLCIGLQIERDRGYRMKTPNNDQDGSYPIPIEAVSMPVRNANHSIHSYGNGNEKQEIL 201
Query: 164 FLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
FLEIWTNGSLTPKEAL+EAS NLIDLFIPFLH EEE +N E+ ++ TLP FT
Sbjct: 202 FLEIWTNGSLTPKEALHEASHNLIDLFIPFLHGEEEDINLEDSLNRGTLPFFT 254
[98][TOP]
>UniRef100_P92225 DNA-directed RNA polymerase subunit alpha n=1 Tax=Crithopsis
delileana RepID=RPOA_CRIDE
Length = 339
Score = 255 bits (651), Expect = 1e-66
Identities = 127/171 (74%), Positives = 142/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGASFEENKNRFTPPLFT 252
[99][TOP]
>UniRef100_P92220 DNA-directed RNA polymerase subunit alpha n=1 Tax=Bromus inermis
RepID=RPOA_BROIN
Length = 339
Score = 255 bits (651), Expect = 1e-66
Identities = 127/171 (74%), Positives = 142/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 252
[100][TOP]
>UniRef100_P92209 DNA-directed RNA polymerase subunit alpha n=3 Tax=Agropyron
RepID=RPOA_AGRCR
Length = 339
Score = 255 bits (651), Expect = 1e-66
Identities = 127/171 (74%), Positives = 142/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDRAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 252
[101][TOP]
>UniRef100_Q8MAJ0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Aegilops
uniaristata RepID=RPOA_AEGUN
Length = 339
Score = 255 bits (651), Expect = 1e-66
Identities = 127/171 (74%), Positives = 142/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGASFEENKNRFTPPLFT 252
[102][TOP]
>UniRef100_P92429 DNA-directed RNA polymerase subunit alpha n=1 Tax=Aegilops tauschii
RepID=RPOA_AEGTA
Length = 339
Score = 255 bits (651), Expect = 1e-66
Identities = 127/171 (74%), Positives = 142/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 252
[103][TOP]
>UniRef100_Q7GED9 DNA-directed RNA polymerase subunit alpha n=9 Tax=Triticeae
RepID=RPOA_AEGCM
Length = 339
Score = 255 bits (651), Expect = 1e-66
Identities = 127/171 (74%), Positives = 142/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGASFEENKNRFTPPLFT 252
[104][TOP]
>UniRef100_Q539V6 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys caduca
RepID=Q539V6_9POAL
Length = 339
Score = 254 bits (650), Expect = 2e-66
Identities = 127/171 (74%), Positives = 142/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDXAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 252
[105][TOP]
>UniRef100_P93960 DNA-directed RNA polymerase subunit alpha n=1 Tax=Psathyrostachys
rupestris RepID=RPOA_PSARU
Length = 339
Score = 254 bits (650), Expect = 2e-66
Identities = 127/171 (74%), Positives = 142/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTXQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 252
[106][TOP]
>UniRef100_P93968 DNA-directed RNA polymerase subunit alpha n=1 Tax=Festucopsis
festucoides RepID=RPOA_FESFE
Length = 339
Score = 254 bits (650), Expect = 2e-66
Identities = 127/171 (74%), Positives = 142/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNLNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 252
[107][TOP]
>UniRef100_A1EA40 DNA-directed RNA polymerase subunit alpha n=1 Tax=Agrostis
stolonifera RepID=RPOA_AGRST
Length = 339
Score = 254 bits (650), Expect = 2e-66
Identities = 127/171 (74%), Positives = 142/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIELQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 252
[108][TOP]
>UniRef100_Q7H6J2 DNA-directed RNA polymerase subunit alpha n=8 Tax=Hordeum
RepID=RPOA_HORBU
Length = 339
Score = 253 bits (646), Expect = 5e-66
Identities = 126/171 (73%), Positives = 141/171 (82%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV VD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVETVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 252
[109][TOP]
>UniRef100_Q539W2 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys lanuginosa
RepID=Q539W2_9POAL
Length = 339
Score = 253 bits (645), Expect = 7e-66
Identities = 126/171 (73%), Positives = 142/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDMAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI L+I+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLRIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 252
[110][TOP]
>UniRef100_P93964 DNA-directed RNA polymerase subunit alpha n=1 Tax=Secale strictum
RepID=RPOA_SECST
Length = 339
Score = 253 bits (645), Expect = 7e-66
Identities = 126/171 (73%), Positives = 141/171 (82%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+ E
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPIANLXE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGASFEENKNRFTPPLFT 252
[111][TOP]
>UniRef100_Q8MAI8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Elymus hystrix
RepID=RPOA_ELYHY
Length = 339
Score = 253 bits (645), Expect = 7e-66
Identities = 127/171 (74%), Positives = 141/171 (82%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAESMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 252
[112][TOP]
>UniRef100_P92439 DNA-directed RNA polymerase subunit alpha n=3 Tax=Thinopyrum
RepID=RPOA_THIBE
Length = 339
Score = 252 bits (644), Expect = 9e-66
Identities = 126/171 (73%), Positives = 141/171 (82%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T P FT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPPFT 252
[113][TOP]
>UniRef100_Q8MAI6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lophopyrum
elongatum RepID=RPOA_LOPEL
Length = 339
Score = 252 bits (644), Expect = 9e-66
Identities = 126/171 (73%), Positives = 141/171 (82%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T P FT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPPFT 252
[114][TOP]
>UniRef100_Q3Y511 RNA polymerase subunit a n=1 Tax=Elymus mutabilis
RepID=Q3Y511_9POAL
Length = 339
Score = 252 bits (643), Expect = 1e-65
Identities = 126/171 (73%), Positives = 141/171 (82%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICIKGPRYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NG EK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGIEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 252
[115][TOP]
>UniRef100_B0FIU7 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta
lupuliformis RepID=B0FIU7_9ASTE
Length = 335
Score = 252 bits (643), Expect = 1e-65
Identities = 127/171 (74%), Positives = 144/171 (84%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG DASI KGPGYVTA++IILPP V +VD+TQHIA + E
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTCDASISIKGPGYVTAEDIILPPHVEVVDSTQHIAWLME 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGL+IER+RGY + T NF+DGSY IDA+FMPV+NANHSIHSY GNEKQEILFL
Sbjct: 142 PIDLCIGLKIERNRGYFLKTHANFEDGSYPIDAVFMPVQNANHSIHSY--GNEKQEILFL 199
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLFIPFLH E+E L+ E+ + L FT
Sbjct: 200 EIWTNGSLTPKEALHEASRNLIDLFIPFLHIEKENLHLEDADRTIPLSPFT 250
[116][TOP]
>UniRef100_B8Y305 RNA polymerase alpha subunit n=1 Tax=Festuca arundinacea
RepID=B8Y305_FESAR
Length = 346
Score = 251 bits (641), Expect = 2e-65
Identities = 126/171 (73%), Positives = 142/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASI KGP Y+TAQ+IILPPSV IVD +Q IAN+TE
Sbjct: 87 ESVQEILLNLKEIVLRSNLYGVRDASISVKGPRYITAQDIILPPSVEIVDTSQPIANLTE 146
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 147 PIDFCIELQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 206
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 207 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 257
[117][TOP]
>UniRef100_C8XU47 RNA polymerase alpha subunit n=1 Tax=Coix lacryma-jobi
RepID=C8XU47_COILA
Length = 339
Score = 251 bits (640), Expect = 3e-65
Identities = 124/171 (72%), Positives = 140/171 (81%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E + EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD TQ IAN+ E
Sbjct: 82 ESIQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTTQPIANLRE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY KN QDGSY IDA+FMPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIELQIKRDRGYHTELRKNSQDGSYPIDAVFMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PF+H EEE +FE +++T PL T
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFIHTEEEGTSFEENKNRLTPPLLT 252
[118][TOP]
>UniRef100_Q8SKY1 DNA-directed RNA polymerase subunit alpha n=2 Tax=Cuscuta reflexa
RepID=RPOA_CUSRE
Length = 335
Score = 251 bits (640), Expect = 3e-65
Identities = 129/171 (75%), Positives = 143/171 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG DASI KGPGYVTA++IILPP V IVD+TQHIA +TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTCDASISIKGPGYVTAEDIILPPHVEIVDSTQHIAWLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI IGL+IER+ GY I T NF+DGSY IDA+FMPVRNANHSI+SY GNEKQEILFL
Sbjct: 142 PINFFIGLKIERNHGYFIKTHANFEDGSYPIDALFMPVRNANHSINSY--GNEKQEILFL 199
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLFIPFLH EEE L+ E+ H + L FT
Sbjct: 200 EIWTNGSLTPKEALHEASRNLIDLFIPFLHMEEENLHLEDADHTIPLSPFT 250
[119][TOP]
>UniRef100_Q6L370 DNA-directed RNA polymerase subunit alpha n=2 Tax=Saccharum
RepID=RPOA_SACHY
Length = 339
Score = 250 bits (639), Expect = 3e-65
Identities = 123/171 (71%), Positives = 140/171 (81%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E + EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD TQ IAN+ E
Sbjct: 82 ESIQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTTQPIANLRE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
P+ CI LQI+RDRGY KN QDGSY IDA+FMPVRN N+SI S NGNEK EILFL
Sbjct: 142 PVDFCIELQIKRDRGYHTELRKNSQDGSYPIDAVFMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PF+H EEE +FE +++T PL T
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFIHTEEEGTSFEENKNRLTPPLLT 252
[120][TOP]
>UniRef100_B3TN81 RNA polymerase alpha subunit (Fragment) n=1 Tax=Brachypodium
distachyon RepID=B3TN81_BRADI
Length = 338
Score = 250 bits (638), Expect = 5e-65
Identities = 125/171 (73%), Positives = 140/171 (81%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP +TAQ+IILPPSV +VD Q IAN+TE
Sbjct: 82 ESVQEILVNLKEIVLRSNLYGVRDASICVKGPRCITAQDIILPPSVEVVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIQLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTGFEENKNRFTPPLFT 252
[121][TOP]
>UniRef100_B2ZE98 RNA polymerase alpha subunit n=1 Tax=Phyllostachys propinqua
RepID=B2ZE98_9POAL
Length = 339
Score = 250 bits (638), Expect = 5e-65
Identities = 126/171 (73%), Positives = 139/171 (81%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY KN QDGSY IDA+ MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIELQIKRDRGYHTELRKNSQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PL T
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLLT 252
[122][TOP]
>UniRef100_P93962 DNA-directed RNA polymerase subunit alpha n=1 Tax=Psathyrostachys
stoloniformis RepID=RPOA_PSAST
Length = 339
Score = 250 bits (638), Expect = 5e-65
Identities = 125/171 (73%), Positives = 140/171 (81%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTXQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY I + MPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIXXVSMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PLFT
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFT 252
[123][TOP]
>UniRef100_Q539W1 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys lanuginosa
RepID=Q539W1_9POAL
Length = 339
Score = 249 bits (636), Expect = 8e-65
Identities = 125/171 (73%), Positives = 140/171 (81%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTXQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY+ KN+QDGSY IDA+ M VRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMXVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PL T
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLLT 252
[124][TOP]
>UniRef100_A1E9V6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Sorghum bicolor
RepID=RPOA_SORBI
Length = 339
Score = 249 bits (636), Expect = 8e-65
Identities = 123/171 (71%), Positives = 139/171 (81%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E + EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+ E
Sbjct: 82 ESIQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTAQPIANLRE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY KN QDGSY IDA+FMPVRN N+SI S NGNEK EILFL
Sbjct: 142 PIDFCIELQIKRDRGYHTELRKNSQDGSYPIDAVFMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PF+H EEE +FE +++T PL T
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFIHTEEEGTSFEESKNRLTPPLLT 252
[125][TOP]
>UniRef100_P09562 DNA-directed RNA polymerase subunit alpha n=1 Tax=Zea mays
RepID=RPOA_MAIZE
Length = 339
Score = 249 bits (635), Expect = 1e-64
Identities = 123/171 (71%), Positives = 139/171 (81%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E + EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD TQ IAN+ E
Sbjct: 82 ESIQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTTQPIANLRE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
P+ CI LQI+RDR Y KN QDGSY IDA+FMPVRN N+SI S NGNEK EILFL
Sbjct: 142 PVDFCIELQIKRDRAYHTELRKNSQDGSYPIDAVFMPVRNVNYSIFSCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLH EEE +FE +++T PL T
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTSFEENKNRLTPPLLT 252
[126][TOP]
>UniRef100_Q6EW20 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nymphaea alba
RepID=RPOA_NYMAL
Length = 341
Score = 248 bits (633), Expect = 2e-64
Identities = 124/172 (72%), Positives = 142/172 (82%), Gaps = 2/172 (1%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLK++V +S+LYG DASIC +GP +VTAQ+II PPSV IVD TQHIA +TE
Sbjct: 82 ESVHEILMNLKKMVFRSDLYGTLDASICVRGPRHVTAQDIISPPSVEIVDTTQHIAVLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
P+ LCI L+IER RGY T N+QDGSY IDA+ MPVRNANHSIHSY NGNEKQEILFL
Sbjct: 142 PVDLCIELKIERGRGYCTRTQNNYQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKL--NFENMXHKVTLPLF 9
EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEE+ + N E+ + ++P F
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEQDINRNMEDNLKRASVPFF 253
[127][TOP]
>UniRef100_C6GJ86 RpoA n=2 Tax=Bambuseae RepID=C6GJ86_BAMOL
Length = 339
Score = 247 bits (630), Expect = 4e-64
Identities = 125/171 (73%), Positives = 138/171 (80%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDMAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CI LQI+RDRGY KN QDGSY IDA+ MPVRN N+SI NGNEK EILFL
Sbjct: 142 PIDFCIELQIKRDRGYHTELRKNSQDGSYPIDAVSMPVRNVNYSIFYCGNGNEKHEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +FE ++ T PL T
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLLT 252
[128][TOP]
>UniRef100_Q5IBI2 RNA polymerase alpha subunit (Fragment) n=1 Tax=Plantago rugelii
RepID=Q5IBI2_9LAMI
Length = 308
Score = 244 bits (623), Expect = 2e-63
Identities = 127/171 (74%), Positives = 137/171 (80%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EILMNLKEIVL+SNLYG ASIC +GPGYVTAQ+IILPP V I DNTQHIA +TE
Sbjct: 67 ESVPEILMNLKEIVLRSNLYGTCGASICARGPGYVTAQDIILPPCVEIGDNTQHIARLTE 126
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CIGL+IER RGY I + FQD SY IDA+FMPVRN NHSIHSY GNEKQEILFL
Sbjct: 127 PISFCIGLEIERSRGYLIKSPHIFQDRSYPIDAVFMPVRNVNHSIHSY--GNEKQEILFL 184
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EASRNLIDLFIPFLH EEE L EN V+ F+
Sbjct: 185 EIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLENNQDTVSFSPFS 235
[129][TOP]
>UniRef100_P60314 DNA-directed RNA polymerase subunit alpha n=1 Tax=Amborella
trichopoda RepID=RPOA_AMBTC
Length = 334
Score = 241 bits (616), Expect = 2e-62
Identities = 122/170 (71%), Positives = 138/170 (81%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEI+++S+LYG RDA IC +GP YVTAQ+II PPSV IVD TQHIA++TE
Sbjct: 82 ESVHEILMNLKEIIVRSDLYGTRDAFICVRGPKYVTAQDIISPPSVKIVDTTQHIASITE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI CIGL+IER+RGYR T QD SY IDA+ MPVRNAN+SI Y N NEKQEILFL
Sbjct: 142 PINFCIGLEIERNRGYRTRTTN--QDASYPIDAVSMPVRNANYSIQCYGNENEKQEILFL 199
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEE L+ ++ + T P F
Sbjct: 200 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEERDLHLDDDQNIFTAPFF 249
[130][TOP]
>UniRef100_B0FIU3 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta nitida
RepID=B0FIU3_9ASTE
Length = 339
Score = 237 bits (605), Expect = 3e-61
Identities = 119/171 (69%), Positives = 141/171 (82%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIVLKSNLYG DAS+ KGP YVTAQ+IILPP V IVD+TQHIA++TE
Sbjct: 82 ESVHDILMNLKEIVLKSNLYGTCDASLYIKGPRYVTAQDIILPPHVEIVDSTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI LCIGL+IER+RGY I FQ+ +Y++DA+FMPV N NHSI+SY GNEK+EILFL
Sbjct: 142 PINLCIGLKIERNRGYLIKAHPPFQNETYSLDAVFMPVLNVNHSIYSY--GNEKKEILFL 199
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EA++NL+DLFIPFL EEE LN E+ H++ FT
Sbjct: 200 EIWTNGSLTPKEALHEAAQNLMDLFIPFLQMEEENLNLEDAEHQIPFSPFT 250
[131][TOP]
>UniRef100_Q2LIN9 RNA polymerase subunit (Fragment) n=1 Tax=Oryza granulata
RepID=Q2LIN9_9ORYZ
Length = 317
Score = 235 bits (600), Expect = 1e-60
Identities = 119/171 (69%), Positives = 135/171 (78%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+RDASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 62 ESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDMAQPIANLTE 121
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
P+ I L+I+RDRGY KN QDGSY IDA+ MPVRN N+SI S NGN K EILFL
Sbjct: 122 PMDFRIELRIKRDRGYHTEVRKNAQDGSYPIDAVSMPVRNVNYSIFSCGNGNAKYEILFL 181
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLH EEE F+ ++ T PL +
Sbjct: 182 EIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLS 232
[132][TOP]
>UniRef100_Q2LIP2 RNA polymerase subunit (Fragment) n=1 Tax=Oryza rhizomatis
RepID=Q2LIP2_9ORYZ
Length = 317
Score = 233 bits (595), Expect = 4e-60
Identities = 118/171 (69%), Positives = 134/171 (78%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+R+ASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 62 ESVQEILLNLKEIVLRSNLYGVRNASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 121
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
P I L+I+RDRGY KN QDGSY IDA+ MPVRN N+SI S NGN K EILFL
Sbjct: 122 PTDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFSCGNGNAKYEILFL 181
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLH EEE F+ ++ T PL +
Sbjct: 182 EIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTRFQENQNRFTSPLLS 232
[133][TOP]
>UniRef100_Q2LIP0 RNA polymerase subunit (Fragment) n=2 Tax=Oryza RepID=Q2LIP0_9ORYZ
Length = 317
Score = 233 bits (595), Expect = 4e-60
Identities = 118/171 (69%), Positives = 134/171 (78%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+R+ASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 62 ESVQEILLNLKEIVLRSNLYGVRNASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 121
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
P I L+I+RDRGY KN QDGSY IDA+ MPVRN N+SI S NGN K EILFL
Sbjct: 122 PTDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFSCGNGNAKYEILFL 181
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLH EEE F+ ++ T PL +
Sbjct: 182 EIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLS 232
[134][TOP]
>UniRef100_Q2LIP1 RNA polymerase subunit (Fragment) n=1 Tax=Oryza punctata
RepID=Q2LIP1_ORYPU
Length = 317
Score = 233 bits (593), Expect = 8e-60
Identities = 118/171 (69%), Positives = 134/171 (78%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+R+ASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 62 ESVQEILLNLKEIVLRSNLYGVRNASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 121
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
P I L+I+RDRGY KN QDGSY IDA+ MPVRN N+SI S NGN K EILFL
Sbjct: 122 PEDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFSCGNGNAKYEILFL 181
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLH EEE F+ ++ T PL +
Sbjct: 182 EIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLS 232
[135][TOP]
>UniRef100_UPI0000DD8D71 Os01g0789400 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000DD8D71
Length = 425
Score = 231 bits (590), Expect = 2e-59
Identities = 117/171 (68%), Positives = 133/171 (77%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+R ASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 170 ESVQEILLNLKEIVLRSNLYGVRTASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 229
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
P I L+I+RDRGY KN QDGSY IDA+ MPVRN N+SI + NGN K EILFL
Sbjct: 230 PTDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFL 289
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLH EEE F+ ++ T PL +
Sbjct: 290 EIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLS 340
[136][TOP]
>UniRef100_Q8S1Q6 Chloroplast RNA polymerase alpha chain n=1 Tax=Oryza sativa
Japonica Group RepID=Q8S1Q6_ORYSJ
Length = 337
Score = 231 bits (590), Expect = 2e-59
Identities = 117/171 (68%), Positives = 133/171 (77%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+R ASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRTASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
P I L+I+RDRGY KN QDGSY IDA+ MPVRN N+SI + NGN K EILFL
Sbjct: 142 PTDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLH EEE F+ ++ T PL +
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLS 252
[137][TOP]
>UniRef100_Q7DNA8 OSJNBa0061C08.8 protein n=2 Tax=Oryza sativa RepID=Q7DNA8_ORYSJ
Length = 446
Score = 231 bits (590), Expect = 2e-59
Identities = 117/171 (68%), Positives = 133/171 (77%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+R ASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 191 ESVQEILLNLKEIVLRSNLYGVRTASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 250
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
P I L+I+RDRGY KN QDGSY IDA+ MPVRN N+SI + NGN K EILFL
Sbjct: 251 PTDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFL 310
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLH EEE F+ ++ T PL +
Sbjct: 311 EIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLS 361
[138][TOP]
>UniRef100_Q2LIP7 RNA polymerase subunit (Fragment) n=1 Tax=Oryza sativa
RepID=Q2LIP7_ORYSA
Length = 317
Score = 231 bits (590), Expect = 2e-59
Identities = 117/171 (68%), Positives = 133/171 (77%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+R ASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 62 ESVQEILLNLKEIVLRSNLYGVRTASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 121
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
P I L+I+RDRGY KN QDGSY IDA+ MPVRN N+SI + NGN K EILFL
Sbjct: 122 PTDFHIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFL 181
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLH EEE F+ ++ T PL +
Sbjct: 182 EIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLS 232
[139][TOP]
>UniRef100_B0FIU4 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta epilinum
RepID=B0FIU4_9ASTE
Length = 330
Score = 231 bits (590), Expect = 2e-59
Identities = 120/167 (71%), Positives = 133/167 (79%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG DASIC KGP +VTAQ+IILPP V IVDNTQHIA +TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTCDASICIKGPRHVTAQDIILPPHVQIVDNTQHIAWLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI IGL+IER+RGY +F DG Y IDA+FMPV+NANHSIHSY GNEKQEILFL
Sbjct: 142 PIDFFIGLKIERNRGYFNKVDLHFDDGIYPIDALFMPVQNANHSIHSY--GNEKQEILFL 199
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTL 18
EIWTNGSLTPKEAL+EA+R LID FIPF H EEE L + H + L
Sbjct: 200 EIWTNGSLTPKEALHEAARILIDFFIPFFHMEEENLYLADAEHTIPL 246
[140][TOP]
>UniRef100_P0C500 DNA-directed RNA polymerase subunit alpha n=7 Tax=Oryza
RepID=RPOA_ORYSJ
Length = 337
Score = 231 bits (590), Expect = 2e-59
Identities = 117/171 (68%), Positives = 133/171 (77%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+R ASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 82 ESVQEILLNLKEIVLRSNLYGVRTASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
P I L+I+RDRGY KN QDGSY IDA+ MPVRN N+SI + NGN K EILFL
Sbjct: 142 PTDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLH EEE F+ ++ T PL +
Sbjct: 202 EIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLS 252
[141][TOP]
>UniRef100_Q7G6A7 DNA-directed RNA polymerase alpha chain, putative, expressed n=2
Tax=Oryza sativa RepID=Q7G6A7_ORYSJ
Length = 446
Score = 230 bits (587), Expect = 4e-59
Identities = 116/171 (67%), Positives = 133/171 (77%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+R ASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 191 ESVQEILLNLKEIVLRSNLYGVRTASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 250
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
P I L+I+RDRGY KN QDGSY IDA+ MPVRN N+SI + NGN + EILFL
Sbjct: 251 PTDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNARYEILFL 310
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEALYEASRNLIDLF+PFLH EEE F+ ++ T PL +
Sbjct: 311 EIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLS 361
[142][TOP]
>UniRef100_Q2LIP5 RNA polymerase subunit (Fragment) n=1 Tax=Oryza glumipatula
RepID=Q2LIP5_9ORYZ
Length = 317
Score = 229 bits (584), Expect = 8e-59
Identities = 116/171 (67%), Positives = 132/171 (77%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+R ASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 62 ESVQEILLNLKEIVLRSNLYGVRTASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 121
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
P I L+I+RDRGY KN QDGSY IDA+ MPVRN N+SI + NGN K EILFL
Sbjct: 122 PTDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFL 181
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTP EALYEASRNLIDLF+PFLH EEE F+ ++ T PL +
Sbjct: 182 EIWTNGSLTPMEALYEASRNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLS 232
[143][TOP]
>UniRef100_Q49C94 RpoA n=1 Tax=Cuscuta europaea RepID=Q49C94_CUSEU
Length = 329
Score = 229 bits (583), Expect = 1e-58
Identities = 119/168 (70%), Positives = 133/168 (79%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLY DASIC KGP +VTAQ+IILPP V IVDNTQHIA +TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYESCDASICIKGPRHVTAQDIILPPHVQIVDNTQHIAWLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI IGL+IER+RGY +F DGSY IDA+FMPV+NANHSIHSY GNEKQEILFL
Sbjct: 142 PIDFFIGLKIERNRGYFNKVDLHFDDGSYPIDALFMPVQNANHSIHSY--GNEKQEILFL 199
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLP 15
EIWTNGSLTPKEAL+E++R LID FIPF EEE L + H + LP
Sbjct: 200 EIWTNGSLTPKEALHESARILIDFFIPFFQMEEENLYLADAKHTIXLP 247
[144][TOP]
>UniRef100_B0FIU5 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta europaea
RepID=B0FIU5_CUSEU
Length = 329
Score = 229 bits (583), Expect = 1e-58
Identities = 119/168 (70%), Positives = 133/168 (79%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLY DASIC KGP +VTAQ+IILPP V IVDNTQHIA +TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYESCDASICIKGPRHVTAQDIILPPHVQIVDNTQHIAWLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI IGL+IER+RGY +F DGSY IDA+FMPV+NANHSIHSY GNEKQEILFL
Sbjct: 142 PIDFFIGLKIERNRGYFNKVDLHFDDGSYPIDALFMPVQNANHSIHSY--GNEKQEILFL 199
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLP 15
EIWTNGSLTPKEAL+E++R LID FIPF EEE L + H + LP
Sbjct: 200 EIWTNGSLTPKEALHESARILIDFFIPFFQMEEENLYLADAKHTIPLP 247
[145][TOP]
>UniRef100_A9QC21 RNA polymerase alpha subunit (Fragment) n=1 Tax=Scaevola aemula
RepID=A9QC21_9ASTR
Length = 332
Score = 227 bits (579), Expect = 3e-58
Identities = 119/171 (69%), Positives = 136/171 (79%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHEILMNLKEIVL+SNLYG +ASIC KGPGYVTAQ+II PP V IVDNTQHIA++TE
Sbjct: 82 ESVHEILMNLKEIVLRSNLYGTCEASICVKGPGYVTAQDIISPPYVEIVDNTQHIASLTE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI+L I LQIE++R ++ FQDGSY I A+ MPVR+ N+SIHS +GN KQEILFL
Sbjct: 142 PIELIIRLQIEKNRFIQLKERNTFQDGSYAIGAVLMPVRHMNYSIHS--SGNGKQEILFL 199
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSLTPKEAL+EA RNLIDLFIPFLH EE N EN ++ P FT
Sbjct: 200 EIWTNGSLTPKEALHEACRNLIDLFIPFLHKEEG--NLENNQDRIPFPSFT 248
[146][TOP]
>UniRef100_UPI0000E123FA Os05g0292500 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000E123FA
Length = 351
Score = 225 bits (574), Expect = 1e-57
Identities = 114/158 (72%), Positives = 126/158 (79%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL+SNLYG+R ASIC KGP Y+TAQ+IILPPSV IVD Q IAN+TE
Sbjct: 191 ESVQEILLNLKEIVLRSNLYGVRTASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTE 250
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
P I L+I+RDRGY KN QDGSY IDA+ MPVRN N+SI + NGN K EILFL
Sbjct: 251 PTDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFL 310
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNF 45
EIWTNGSLTPKEALYEASRNLIDLF+PFLH EEE F
Sbjct: 311 EIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTRF 348
[147][TOP]
>UniRef100_A6H5L3 DNA-directed RNA polymerase subunit alpha n=2 Tax=Cycas
RepID=RPOA_CYCTA
Length = 340
Score = 224 bits (572), Expect = 2e-57
Identities = 113/171 (66%), Positives = 138/171 (80%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+IL+NLKEIVL+S+ YG R+ASIC GP VTAQ+IILPPSV I+D TQHIA++T+
Sbjct: 82 ESVHDILINLKEIVLRSDPYGTREASICIVGPRNVTAQDIILPPSVRIIDATQHIASLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I L IE+DRGYRI + KN+QDG + IDA+FMPVRNAN+SIHSY NGN+ QEILFL
Sbjct: 142 SITFDIRLWIEKDRGYRIQSPKNYQDGIFPIDAVFMPVRNANYSIHSYGNGNDIQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLFT 6
EIWTNGSL P+EALY ASRNLIDLFIPFL AEE+ ++ + + +P F+
Sbjct: 202 EIWTNGSLAPREALYRASRNLIDLFIPFLRAEEQNIDGMDNQNGSNMPSFS 252
[148][TOP]
>UniRef100_B7T2T8 RNA polymerase alpha subunit n=1 Tax=Erodium chrysanthum
RepID=B7T2T8_9ROSI
Length = 329
Score = 223 bits (569), Expect = 5e-57
Identities = 117/163 (71%), Positives = 133/163 (81%), Gaps = 3/163 (1%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V+EI+MNLKEIVL+S+LYG RDASIC +GP VTAQ+IILPPSV IVDNTQHI +TE
Sbjct: 82 ESVYEIVMNLKEIVLRSSLYGTRDASICVRGPRDVTAQDIILPPSVSIVDNTQHIVTLTE 141
Query: 338 PIQLCIGLQIERDRGY--RINTLKNFQD-GSYNIDAIFMPVRNANHSIHSYVNGNEKQEI 168
PI+ C+ LQIER+RGY RI T N D Y IDA+FMPV+N NHSIHSY NG+ E+
Sbjct: 142 PIEFCVALQIERNRGYSLRIPTPNNSHDERGYPIDAVFMPVKNVNHSIHSYENGS--HEM 199
Query: 167 LFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFEN 39
LF EIWTNGSLTPKEAL EASR LI+LFIPFLHAEEEK +FEN
Sbjct: 200 LFFEIWTNGSLTPKEALREASRKLINLFIPFLHAEEEKPHFEN 242
[149][TOP]
>UniRef100_C3W219 RNA polymerase alpha subunit n=1 Tax=Pinus monticola
RepID=C3W219_PINMO
Length = 335
Score = 221 bits (564), Expect = 2e-56
Identities = 112/164 (68%), Positives = 135/164 (82%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIVL+S+ YGIR+ASI GP VTAQ+IILPPSV I+D TQHIA +T+
Sbjct: 82 ESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I LQIE++RGY I++ N+QDG + IDA+FMPVR+AN+SIHSY +GNE QE+LFL
Sbjct: 142 SITFDIRLQIEKNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHK 27
EIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ N + M +K
Sbjct: 202 EIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ--NIDGMNNK 243
[150][TOP]
>UniRef100_B7T309 RNA polymerase alpha subunit n=1 Tax=Erodium texanum
RepID=B7T309_EROTE
Length = 328
Score = 221 bits (564), Expect = 2e-56
Identities = 113/169 (66%), Positives = 132/169 (78%), Gaps = 3/169 (1%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V+EI+MNLKEIVL+SNLYG RDASIC +GP VTAQ+IILPPSV IVDNTQHI +TE
Sbjct: 82 ESVYEIVMNLKEIVLRSNLYGTRDASICVRGPRDVTAQDIILPPSVAIVDNTQHIVTLTE 141
Query: 338 PIQLCIGLQIERDRGYRIN---TLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEI 168
PI C+GLQIER+RGY + + D Y IDA+FMPV+N NHSIH+Y NG+ E+
Sbjct: 142 PIDFCVGLQIERNRGYSMKIPMPTNSHDDRGYPIDAVFMPVKNVNHSIHAYENGS--HEM 199
Query: 167 LFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVT 21
LF EIWTNGSLTPKEAL EASR LI+LFIPFLHAEEE + EN ++ T
Sbjct: 200 LFFEIWTNGSLTPKEALREASRKLINLFIPFLHAEEENSHLENNQNQHT 248
[151][TOP]
>UniRef100_C3W2E4 RNA polymerase alpha subunit n=1 Tax=Pinus peuce RepID=C3W2E4_PINPE
Length = 335
Score = 221 bits (562), Expect = 3e-56
Identities = 112/164 (68%), Positives = 135/164 (82%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIVL+S+ YGIR+ASI GP VTAQ+IILPPSV I+D TQHIA +T+
Sbjct: 82 ESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I LQIE++RGY I++ N+QDG + IDA+FMPVR+AN+SIHSY +GNE QE+LFL
Sbjct: 142 SITSDIRLQIEKNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHK 27
EIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ N + M +K
Sbjct: 202 EIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ--NIDGMNNK 243
[152][TOP]
>UniRef100_C3VYH6 RNA polymerase alpha subunit n=4 Tax=Strobus RepID=C3VYH6_PINST
Length = 335
Score = 221 bits (562), Expect = 3e-56
Identities = 112/164 (68%), Positives = 135/164 (82%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIVL+S+ YGIR+ASI GP VTAQ+IILPPSV I+D TQHIA +T+
Sbjct: 82 ESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I LQIE++RGY I++ N+QDG + IDA+FMPVR+AN+SIHSY +GNE QE+LFL
Sbjct: 142 SITSDIRLQIEKNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHK 27
EIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ N + M +K
Sbjct: 202 EIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ--NIDGMNNK 243
[153][TOP]
>UniRef100_C3VYB7 RNA polymerase alpha subunit n=1 Tax=Pinus squamata
RepID=C3VYB7_9CONI
Length = 335
Score = 221 bits (562), Expect = 3e-56
Identities = 112/164 (68%), Positives = 135/164 (82%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIVL+S+ YGIR+ASI GP VTAQ+IILPPSV I+D TQHIA +T+
Sbjct: 82 ESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I LQIE++RGY I++ N+QDG + IDA+FMPVR+AN+SIHSY +GNE QE+LFL
Sbjct: 142 SITSDIRLQIEKNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHK 27
EIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ N + M +K
Sbjct: 202 EIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ--NIDGMNNK 243
[154][TOP]
>UniRef100_C3TSB3 RNA polymerase alpha subunit n=1 Tax=Pinus krempfii
RepID=C3TSB3_PINKR
Length = 335
Score = 221 bits (562), Expect = 3e-56
Identities = 112/164 (68%), Positives = 135/164 (82%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIVL+S+ YGIR+ASI GP VTAQ+IILPPSV I+D TQHIA +T+
Sbjct: 82 ESVHDILMNLKEIVLRSDSYGIREASIYIVGPKNVTAQDIILPPSVKIIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I LQIE++RGY I++ N+QDG + IDA+FMPVR+AN+SIHSY +GNE QE+LFL
Sbjct: 142 SITSDIRLQIEKNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHK 27
EIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ N + M +K
Sbjct: 202 EIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ--NIDGMNNK 243
[155][TOP]
>UniRef100_Q85X01 DNA-directed RNA polymerase subunit alpha n=5 Tax=Strobus
RepID=RPOA_PINKO
Length = 335
Score = 221 bits (562), Expect = 3e-56
Identities = 112/164 (68%), Positives = 135/164 (82%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIVL+S+ YGIR+ASI GP VTAQ+IILPPSV I+D TQHIA +T+
Sbjct: 82 ESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I LQIE++RGY I++ N+QDG + IDA+FMPVR+AN+SIHSY +GNE QE+LFL
Sbjct: 142 SITSDIRLQIEKNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHK 27
EIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ N + M +K
Sbjct: 202 EIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ--NIDGMNNK 243
[156][TOP]
>UniRef100_C3VZR7 RNA polymerase alpha subunit n=1 Tax=Pinus aristata
RepID=C3VZR7_9CONI
Length = 335
Score = 220 bits (561), Expect = 4e-56
Identities = 110/160 (68%), Positives = 133/160 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIVL+S+ YGIR+ASI GP VTAQ+IILPPSV I+D TQHIA +T+
Sbjct: 82 ESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I LQIE++RGY I++ N+QDG + IDA+FMPVR+AN+SIHSY +GNE QE+LFL
Sbjct: 142 SITSDIRLQIEKNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFEN 39
EIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++ N
Sbjct: 202 EIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNIDGMN 241
[157][TOP]
>UniRef100_C3VZJ9 RNA polymerase alpha subunit n=1 Tax=Pinus albicaulis
RepID=C3VZJ9_9CONI
Length = 335
Score = 220 bits (561), Expect = 4e-56
Identities = 110/160 (68%), Positives = 133/160 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIVL+S+ YGIR+ASI GP VTAQ+IILPPSV I+D TQHIA +T+
Sbjct: 82 ESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I LQIE++RGY I++ N+QDG + IDA+FMPVR+AN+SIHSY +GNE QE+LFL
Sbjct: 142 SITSDIRLQIEKNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFEN 39
EIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++ N
Sbjct: 202 EIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNIDGMN 241
[158][TOP]
>UniRef100_C3VXZ8 RNA polymerase alpha subunit n=1 Tax=Pinus rzedowskii
RepID=C3VXZ8_PINRZ
Length = 335
Score = 220 bits (561), Expect = 4e-56
Identities = 110/160 (68%), Positives = 133/160 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIVL+S+ YGIR+ASI GP VTAQ+IILPPSV I+D TQHIA +T+
Sbjct: 82 ESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I LQIE++RGY I++ N+QDG + IDA+FMPVR+AN+SIHSY +GNE QE+LFL
Sbjct: 142 SITSDIRLQIEKNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFEN 39
EIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++ N
Sbjct: 202 EIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNIDGMN 241
[159][TOP]
>UniRef100_B7T379 RNA polymerase alpha subunit n=1 Tax=Geranium carolinianum
RepID=B7T379_9ROSI
Length = 329
Score = 220 bits (561), Expect = 4e-56
Identities = 118/177 (66%), Positives = 137/177 (77%), Gaps = 5/177 (2%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E ++EILMNLKEIVL+SNL G RDASIC +GP VTAQ+IILP S IVDNTQHI +TE
Sbjct: 82 ESIYEILMNLKEIVLRSNLDGTRDASICVRGPRDVTAQDIILPNSAAIVDNTQHIVTLTE 141
Query: 338 PIQLCIGLQIERDRGY--RINTLKNFQDG-SYNIDAIFMPVRNANHSIHSYVNGNEKQEI 168
PI CIGLQI+R+RGY +I NF D Y IDA+F+PV+N NHSIHSY NG+ E+
Sbjct: 142 PIDFCIGLQIDRNRGYSRKIPMPTNFHDDRGYPIDAVFLPVKNVNHSIHSYENGS--HEM 199
Query: 167 LFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVT--LPLFTC 3
LFLEIWTNGSLTPKEAL EASR LI+LFIPFLHAEEE +FEN ++ T LP+ C
Sbjct: 200 LFLEIWTNGSLTPKEALREASRKLINLFIPFLHAEEENFHFENNQNEHTDELPIDLC 256
[160][TOP]
>UniRef100_C1IXV8 RNA polymerase alpha subunit n=1 Tax=Pinus gerardiana
RepID=C1IXV8_PINGE
Length = 335
Score = 219 bits (558), Expect = 9e-56
Identities = 111/164 (67%), Positives = 134/164 (81%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIVL+S+ YGIR+ASI GP VTAQ+IILPPSV I+D TQHIA +T+
Sbjct: 82 ESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I LQIE++RGY I++ N+QDG + IDA+FMPVR+ N+SIHSY +GNE QE+LFL
Sbjct: 142 SITSDIRLQIEKNRGYIIHSSNNYQDGIFPIDAVFMPVRDVNYSIHSYGSGNEIQEVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHK 27
EIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ N + M +K
Sbjct: 202 EIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ--NIDGMNNK 243
[161][TOP]
>UniRef100_C3W150 RNA polymerase alpha subunit n=1 Tax=Pinus leiophylla var.
chihuahuana RepID=C3W150_PINLE
Length = 335
Score = 219 bits (557), Expect = 1e-55
Identities = 111/164 (67%), Positives = 135/164 (82%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIVL+S+ YGIR+ASI GP VTAQ+IILPPSV I+D TQHIA +T+
Sbjct: 82 ESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I LQIE++RGY I++ N+QDG + IDA+FMPVR+AN+SIHSY +GNE +E+LFL
Sbjct: 142 SITSDIRLQIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHK 27
EIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ N + M +K
Sbjct: 202 EIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ--NIDGMNNK 243
[162][TOP]
>UniRef100_C3W0G5 RNA polymerase alpha subunit n=1 Tax=Pinus banksiana
RepID=C3W0G5_PINBN
Length = 335
Score = 219 bits (557), Expect = 1e-55
Identities = 111/164 (67%), Positives = 135/164 (82%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIVL+S+ YGIR+ASI GP VTAQ+IILPPSV I+D TQHIA +T+
Sbjct: 82 ESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I LQIE++RGY I++ N+QDG + IDA+FMPVR+AN+SIHSY +GNE +E+LFL
Sbjct: 142 SITSDIRLQIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHK 27
EIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ N + M +K
Sbjct: 202 EIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ--NIDGMNNK 243
[163][TOP]
>UniRef100_C3VZ24 RNA polymerase alpha subunit n=2 Tax=Pinus torreyana
RepID=C3VZ24_PINTO
Length = 335
Score = 219 bits (557), Expect = 1e-55
Identities = 111/164 (67%), Positives = 135/164 (82%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIVL+S+ YGIR+ASI GP VTAQ+IILPPSV I+D TQHIA +T+
Sbjct: 82 ESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I LQIE++RGY I++ N+QDG + IDA+FMPVR+AN+SIHSY +GNE +E+LFL
Sbjct: 142 SITSDIRLQIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHK 27
EIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ N + M +K
Sbjct: 202 EIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ--NIDGMNNK 243
[164][TOP]
>UniRef100_C3VXH3 RNA polymerase alpha subunit n=2 Tax=Pinus RepID=C3VXH3_PINPO
Length = 335
Score = 219 bits (557), Expect = 1e-55
Identities = 111/164 (67%), Positives = 135/164 (82%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIVL+S+ YGIR+ASI GP VTAQ+IILPPSV I+D TQHIA +T+
Sbjct: 82 ESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I LQIE++RGY I++ N+QDG + IDA+FMPVR+AN+SIHSY +GNE +E+LFL
Sbjct: 142 SITSDIRLQIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHK 27
EIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ N + M +K
Sbjct: 202 EIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ--NIDGMNNK 243
[165][TOP]
>UniRef100_C1IXP0 RNA polymerase alpha subunit n=1 Tax=Pinus contorta
RepID=C1IXP0_PINCO
Length = 335
Score = 219 bits (557), Expect = 1e-55
Identities = 111/164 (67%), Positives = 135/164 (82%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIVL+S+ YGIR+ASI GP VTAQ+IILPPSV I+D TQHIA +T+
Sbjct: 82 ESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I LQIE++RGY I++ N+QDG + IDA+FMPVR+AN+SIHSY +GNE +E+LFL
Sbjct: 142 SITSDIRLQIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHK 27
EIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ N + M +K
Sbjct: 202 EIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ--NIDGMNNK 243
[166][TOP]
>UniRef100_C3W0T7 RNA polymerase alpha subunit n=1 Tax=Cedrus deodara
RepID=C3W0T7_CEDDE
Length = 335
Score = 218 bits (555), Expect = 2e-55
Identities = 109/170 (64%), Positives = 136/170 (80%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIVL+S+ YG+R+ASI GP VTAQ+IILPPSV I+D TQHIA +T+
Sbjct: 82 ESVHDILMNLKEIVLRSDSYGVREASIYIVGPRNVTAQDIILPPSVKIIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I L+IE++RGY I++ N+QDG + IDA+FMPVR+AN+SIHSY +GNE +E+LFL
Sbjct: 142 SITSDIKLRIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++ N +P F
Sbjct: 202 EIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNIDGMNNRKGSNMPPF 251
[167][TOP]
>UniRef100_C3W2L0 RNA polymerase alpha subunit n=1 Tax=Pinus pinaster
RepID=C3W2L0_PINPS
Length = 335
Score = 217 bits (553), Expect = 3e-55
Identities = 110/164 (67%), Positives = 134/164 (81%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIV +S+ YGIR+ASI GP VTAQ+IILPPSV I+D TQHIA +T+
Sbjct: 82 ESVHDILMNLKEIVFRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I LQIE++RGY I++ N+QDG + IDA+FMPVR+AN+SIHSY +GNE +E+LFL
Sbjct: 142 SITSDIRLQIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHK 27
EIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ N + M +K
Sbjct: 202 EIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ--NIDGMNNK 243
[168][TOP]
>UniRef100_C3VXT2 RNA polymerase alpha subunit n=1 Tax=Pinus resinosa
RepID=C3VXT2_PINRE
Length = 335
Score = 217 bits (553), Expect = 3e-55
Identities = 110/164 (67%), Positives = 134/164 (81%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIV +S+ YGIR+ASI GP VTAQ+IILPPSV I+D TQHIA +T+
Sbjct: 82 ESVHDILMNLKEIVFRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I LQIE++RGY I++ N+QDG + IDA+FMPVR+AN+SIHSY +GNE +E+LFL
Sbjct: 142 SITSDIRLQIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHK 27
EIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ N + M +K
Sbjct: 202 EIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ--NIDGMNNK 243
[169][TOP]
>UniRef100_P41629 DNA-directed RNA polymerase subunit alpha n=2 Tax=Pinus thunbergii
RepID=RPOA_PINTH
Length = 335
Score = 217 bits (553), Expect = 3e-55
Identities = 110/164 (67%), Positives = 134/164 (81%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIV +S+ YGIR+ASI GP VTAQ+IILPPSV I+D TQHIA +T+
Sbjct: 82 ESVHDILMNLKEIVFRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I LQIE++RGY I++ N+QDG + IDA+FMPVR+AN+SIHSY +GNE +E+LFL
Sbjct: 142 SITSDIRLQIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHK 27
EIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ N + M +K
Sbjct: 202 EIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ--NIDGMNNK 243
[170][TOP]
>UniRef100_B7T3M1 RNA polymerase alpha subunit n=1 Tax=Geranium palmatum
RepID=B7T3M1_9ROSI
Length = 329
Score = 216 bits (551), Expect = 6e-55
Identities = 115/177 (64%), Positives = 135/177 (76%), Gaps = 5/177 (2%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E ++EILMNLKEIVL+S+LYG RDASIC +GP VTAQ+IILP S IVDNTQHI +TE
Sbjct: 82 ESIYEILMNLKEIVLRSHLYGTRDASICVRGPRDVTAQDIILPTSATIVDNTQHIVTITE 141
Query: 338 PIQLCIGLQIERDRGY--RINTLKNFQDG-SYNIDAIFMPVRNANHSIHSYVNGNEKQEI 168
PI C+GLQIER+RGY +I L N D Y ID++FMPV+N NHSIHSY NG +
Sbjct: 142 PIDFCVGLQIERNRGYFIQIPMLTNLHDDRGYPIDSVFMPVKNVNHSIHSYENG--IHAM 199
Query: 167 LFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVT--LPLFTC 3
LFLEIWTNGSLTPKEAL EASR L +LFIPFLHAEE+ +FEN ++ T LP+ C
Sbjct: 200 LFLEIWTNGSLTPKEALREASRKLSNLFIPFLHAEEQNFHFENNQNEHTDELPIDFC 256
[171][TOP]
>UniRef100_C3W1N1 RNA polymerase alpha subunit n=1 Tax=Larix occidentalis
RepID=C3W1N1_LAROX
Length = 335
Score = 216 bits (550), Expect = 7e-55
Identities = 109/170 (64%), Positives = 135/170 (79%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIVL+S+ YGIR+ASI GP VTAQ+IILPPSV I+D TQHIA +T+
Sbjct: 82 ESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I L+IE++RGY I++ N+QDG + IDA+FMPVR+AN+SIHSY +GNE +E+LFL
Sbjct: 142 SITSDIRLRIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNG LTP+EALYEASRNLIDL IPFLH EE+ ++ N +P F
Sbjct: 202 EIWTNGGLTPREALYEASRNLIDLLIPFLHGEEQNIDGMNNRKGSNMPPF 251
[172][TOP]
>UniRef100_C3W0M8 RNA polymerase alpha subunit n=1 Tax=Pinus canariensis
RepID=C3W0M8_9CONI
Length = 335
Score = 216 bits (549), Expect = 1e-54
Identities = 109/164 (66%), Positives = 133/164 (81%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIV +S+ YGIR+ASI GP VTAQ+IILPPSV I+D TQHIA +T+
Sbjct: 82 ESVHDILMNLKEIVFRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I LQIE++RGY I++ N+QDG + IDA+FMPVR+ N+SIHSY +GNE +E+LFL
Sbjct: 142 SITSDIRLQIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDVNYSIHSYGSGNEIREVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHK 27
EIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ N + M +K
Sbjct: 202 EIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ--NIDGMNNK 243
[173][TOP]
>UniRef100_B7ZIR8 RNA polymerase alpha chain n=1 Tax=Keteleeria davidiana
RepID=B7ZIR8_KETDA
Length = 336
Score = 216 bits (549), Expect = 1e-54
Identities = 106/157 (67%), Positives = 131/157 (83%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIVL+S+ YGIR+ASI GP VTAQ+IILPPSV I+D TQHIA +T+
Sbjct: 82 ESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I L+IE++RGY I++ N+QDG + IDA+FMPVR+AN+SIHSY +GNE +E+LFL
Sbjct: 142 SITFDIRLRIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 48
EIWTNG LTP+EALYEASRNLID FIPFLH EE+ ++
Sbjct: 202 EIWTNGGLTPREALYEASRNLIDFFIPFLHGEEQNID 238
[174][TOP]
>UniRef100_C3W1V8 RNA polymerase alpha subunit n=1 Tax=Pinus merkusii
RepID=C3W1V8_9CONI
Length = 335
Score = 215 bits (548), Expect = 1e-54
Identities = 109/164 (66%), Positives = 133/164 (81%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIV +S+ YGIR+ASI GP VTAQ+IILPPSV +D TQHIA +T+
Sbjct: 82 ESVHDILMNLKEIVFRSDSYGIREASIYIVGPRNVTAQDIILPPSVKTIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I LQIE++RGY I++ N+QDG + IDA+FMPVR+AN+SIHSY +GNE +E+LFL
Sbjct: 142 SITSDIRLQIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHK 27
EIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ N + M +K
Sbjct: 202 EIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ--NIDGMNNK 243
[175][TOP]
>UniRef100_C3VZD6 RNA polymerase alpha subunit n=1 Tax=Abies firma RepID=C3VZD6_ABIFI
Length = 336
Score = 215 bits (548), Expect = 1e-54
Identities = 107/160 (66%), Positives = 132/160 (82%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIVL+S+ YGIR+ASI GP VTAQ+IILPPSV I+D TQHIA +T+
Sbjct: 82 ESVHDILMNLKEIVLRSDSYGIREASIYIVGPRNVTAQDIILPPSVKIIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I L+IE++RGY I++ N+QDG + IDA+FMPVR+AN+SIHSY +GNE +E+LFL
Sbjct: 142 SITFDIRLRIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFEN 39
EIWTNG LTP+EALYEASRNLIDL IPFLH EE+ ++ N
Sbjct: 202 EIWTNGGLTPREALYEASRNLIDLLIPFLHGEEQNIDGMN 241
[176][TOP]
>UniRef100_C1IXH8 RNA polymerase alpha subunit n=1 Tax=Picea sitchensis
RepID=C1IXH8_PICSI
Length = 336
Score = 214 bits (546), Expect = 2e-54
Identities = 109/170 (64%), Positives = 134/170 (78%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLKEIVL+S+ YGIR ASIC GP VTAQ+IILPPSV I+D TQHIA +T+
Sbjct: 82 ESVHDILMNLKEIVLRSDSYGIRGASICIVGPRNVTAQDIILPPSVKIIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I LQIE++RGY I++ N+QDG + IDA+FMPVR+AN+SIHSY +GNE +E+LFL
Sbjct: 142 SITSDIRLQIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNG LTP+EAL EASR LI+LFIPFLH EE+ ++ N +P F
Sbjct: 202 EIWTNGGLTPREALSEASRILIELFIPFLHGEEQNIDGMNNRKGSNMPPF 251
[177][TOP]
>UniRef100_C3VYP0 RNA polymerase alpha subunit n=1 Tax=Pinus taeda RepID=C3VYP0_PINTA
Length = 335
Score = 214 bits (545), Expect = 3e-54
Identities = 109/164 (66%), Positives = 133/164 (81%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLK IVL+S+ YGI +ASI GP VTAQ+IILPPSV I+D TQHIA +T+
Sbjct: 82 ESVHDILMNLKXIVLRSDSYGIXEASIYIVGPRNVTAQDIILPPSVKIIDTTQHIARLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I LQIE++RGY I++ N+QDG + IDA+FMPVR+AN+SIHSY +GNE +E+LFL
Sbjct: 142 SITSDIRLQIEKNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHK 27
EIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ N + M +K
Sbjct: 202 EIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQ--NIDGMNNK 243
[178][TOP]
>UniRef100_B7T3U2 RNA polymerase alpha subunit n=1 Tax=Monsonia speciosa
RepID=B7T3U2_9ROSI
Length = 331
Score = 213 bits (543), Expect = 5e-54
Identities = 116/179 (64%), Positives = 133/179 (74%), Gaps = 7/179 (3%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E ++EILMNLKEIVL+SNLYG RDASIC +GP VTAQ+IILPPS IVDNTQHI +TE
Sbjct: 82 ESIYEILMNLKEIVLRSNLYGTRDASICVRGPRDVTAQDIILPPSTAIVDNTQHIFTLTE 141
Query: 338 PIQLCIGLQIERDRGYRIN----TLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQE 171
PI C+GL+IER RGY I T D +Y IDA+FMPVRN NHSIHSY G+ E
Sbjct: 142 PIDFCVGLKIERGRGYSIKIPMPTDLFHHDSAYPIDAVFMPVRNVNHSIHSYERGS--HE 199
Query: 170 ILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNF-ENMXHKVT--LPLFTC 3
+LFLEIWTNGSLTPKEAL EASR LI+L +PFLHAEEE EN ++ T LP+ C
Sbjct: 200 MLFLEIWTNGSLTPKEALREASRKLINLLMPFLHAEEENFYLVENNQNQDTEELPIDLC 258
[179][TOP]
>UniRef100_B7T3F0 RNA polymerase alpha subunit n=1 Tax=Geranium macrorrhizum
RepID=B7T3F0_9ROSI
Length = 329
Score = 211 bits (538), Expect = 2e-53
Identities = 111/169 (65%), Positives = 130/169 (76%), Gaps = 3/169 (1%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E ++EILMNLKEIVL+S+LYG RDASIC +GP VT+Q+IILP IVDNTQHI +TE
Sbjct: 82 ESIYEILMNLKEIVLRSHLYGTRDASICVRGPRDVTSQDIILPTFATIVDNTQHIVTLTE 141
Query: 338 PIQLCIGLQIERDRGY--RINTLKNFQDG-SYNIDAIFMPVRNANHSIHSYVNGNEKQEI 168
PI C+GLQIER+RGY +I L N D Y IDA+FMPV+N NHSIHSY NG +
Sbjct: 142 PIDFCVGLQIERNRGYFIQIPMLSNLHDDRGYPIDAVFMPVKNVNHSIHSYENG--IHAM 199
Query: 167 LFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVT 21
LFLEIWTNGSLTPKEAL ASR LI+LFIPFLHAEE+ +FEN ++ T
Sbjct: 200 LFLEIWTNGSLTPKEALRGASRKLINLFIPFLHAEEQNCHFENNQNEHT 248
[180][TOP]
>UniRef100_B7T413 RNA polymerase alpha subunit n=1 Tax=Monsonia vanderietiae
RepID=B7T413_9ROSI
Length = 333
Score = 211 bits (537), Expect = 2e-53
Identities = 116/181 (64%), Positives = 131/181 (72%), Gaps = 9/181 (4%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E ++EILMNLKEIVL+SNLYG RDASIC +GP VTAQ+IILPPS IVDNTQHI +TE
Sbjct: 82 ESIYEILMNLKEIVLRSNLYGTRDASICVRGPRDVTAQDIILPPSTAIVDNTQHIVTLTE 141
Query: 338 PIQLCIGLQIERDRGYRIN----TLKNFQDGSY--NIDAIFMPVRNANHSIHSYVNGNEK 177
PI C+ L+IER RGY I T D Y IDA+FMPVRN NHSI+SY G+
Sbjct: 142 PIDFCVELKIERGRGYSIKIPMPTNPFHHDSGYPIPIDAVFMPVRNVNHSIYSYKRGS-- 199
Query: 176 QEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEK---LNFENMXHKVTLPLFT 6
+EILFLEIWTNGSLTPKEAL EASR LI+LFIPFLHAEEE L H LP+ +
Sbjct: 200 REILFLEIWTNGSLTPKEALREASRKLINLFIPFLHAEEENFYLLENNQNQHTEELPIDS 259
Query: 5 C 3
C
Sbjct: 260 C 260
[181][TOP]
>UniRef100_Q4FGA3 RNA polymerase alpha chain (Fragment) n=1 Tax=Ginkgo biloba
RepID=Q4FGA3_GINBI
Length = 337
Score = 200 bits (509), Expect = 4e-50
Identities = 105/170 (61%), Positives = 129/170 (75%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+I +NL+ IVL+S+ YGIR+ASI GP VTAQ+IILPPSV I+D TQHIA++ E
Sbjct: 82 ESVHDISINLRGIVLQSDPYGIREASIYSVGPRDVTAQDIILPPSVRIIDTTQHIASLKE 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I I QI +DRGYRI + N +DG ++ DA+ MPVRNAN+SIHSY NGNE QEILF
Sbjct: 142 SITSDIRSQIGKDRGYRIQSPNNSRDGIFSTDAVSMPVRNANYSIHSYGNGNEMQEILFS 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPLF 9
EIWTNGSL P EALYEASRNLIDLFIPF+ AEE+ ++ + + + LF
Sbjct: 202 EIWTNGSLAPGEALYEASRNLIDLFIPFMRAEEQNIDGIDNWNGYNMSLF 251
[182][TOP]
>UniRef100_Q5EFY4 RNA polymerase alpha subunit n=1 Tax=Dendroligotrichum dendroides
RepID=Q5EFY4_9BRYO
Length = 340
Score = 200 bits (508), Expect = 5e-50
Identities = 98/155 (63%), Positives = 124/155 (80%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E H+IL+NLKEIVLKSN Y + A + GP +TAQ+IILPPSV I+D TQ+IA +T+
Sbjct: 82 ESAHDILINLKEIVLKSNSYETQKAFLSILGPKKITAQDIILPPSVKIIDTTQYIATITK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI L I L+I++D GYRI DG ++IDAIFMP+RNAN+S+HS+ N N+ QEILF+
Sbjct: 142 PIHLDIELEIDKDCGYRIXDSVKSIDGYFSIDAIFMPIRNANYSVHSFENNNKIQEILFI 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEK 54
EIWTNGS+TPKEALYEASR+LIDLFIPFLH E+++
Sbjct: 202 EIWTNGSITPKEALYEASRSLIDLFIPFLHTEKKE 236
[183][TOP]
>UniRef100_Q5EFY8 RNA polymerase alpha subunit n=1 Tax=Oedipodium griffithianum
RepID=Q5EFY8_9BRYO
Length = 340
Score = 199 bits (506), Expect = 9e-50
Identities = 100/156 (64%), Positives = 125/156 (80%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+IL+NLKEIVL+SN Y + A I GP VTAQ+IILPPSV I+D TQ+IA +T+
Sbjct: 82 ESVHDILINLKEIVLRSNSYETQKAFISILGPKKVTAQDIILPPSVKIIDTTQYIATLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I L I L+IE+D GYRI DG + IDAIFMP+RNAN+S+HS+ + N+ QEILF+
Sbjct: 142 TIHLDIELEIEKDCGYRIQDSIKSTDGHFPIDAIFMPIRNANYSVHSFEHENKTQEILFI 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKL 51
EIWTNGS+TPKEALYEASR+LIDLFIPFLHAE++++
Sbjct: 202 EIWTNGSITPKEALYEASRSLIDLFIPFLHAEKKEI 237
[184][TOP]
>UniRef100_Q5EFY2 RNA polymerase alpha subunit n=1 Tax=Polytrichum pallidisetum
RepID=Q5EFY2_9BRYO
Length = 338
Score = 199 bits (505), Expect = 1e-49
Identities = 100/155 (64%), Positives = 123/155 (79%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+IL+NLKEIVLKSN + A I GP +TAQ+IILPPSV I+D TQ+IA +T+
Sbjct: 82 ESVHDILINLKEIVLKSNSSETQKAFISILGPKKITAQDIILPPSVKIIDTTQYIATITK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI L I L+IE+D GYRI DG + IDAIFMP+RNAN+S+HS+ N N+ QEILF+
Sbjct: 142 PIHLDIELEIEKDCGYRIQDSVKSIDGYFPIDAIFMPIRNANYSVHSFENNNKIQEILFI 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEK 54
EIWTNGS+TPKEALYEASR+LIDLFIPFLH E+++
Sbjct: 202 EIWTNGSITPKEALYEASRSLIDLFIPFLHPEKKE 236
[185][TOP]
>UniRef100_Q60F88 DNA-directed RNA polymerase subunit alpha n=1 Tax=Takakia
lepidozioides RepID=RPOA_TAKLE
Length = 341
Score = 197 bits (501), Expect = 4e-49
Identities = 98/155 (63%), Positives = 124/155 (80%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH++L+NL EIVL+S+ Y + A I GP VTAQ+IILPPSV I+D TQ+IA VT+
Sbjct: 82 ESVHDVLINLGEIVLRSDSYETQKAFISILGPKKVTAQDIILPPSVKIIDTTQYIATVTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I L I L+IE+D GYRI DG++ +DA+FMP+RN N+S+HS+ NGNE QEILFL
Sbjct: 142 AIHLDIELKIEKDFGYRIEDPIKSADGNFPVDAVFMPIRNVNYSVHSFENGNETQEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEK 54
EIWTNGS+TPKEALYEASR+LI+LFIPFLHAE+++
Sbjct: 202 EIWTNGSVTPKEALYEASRSLINLFIPFLHAEKKE 236
[186][TOP]
>UniRef100_B1VKC7 RNA polymerase alpha subunit n=1 Tax=Cryptomeria japonica
RepID=B1VKC7_CRYJA
Length = 342
Score = 192 bits (488), Expect = 1e-47
Identities = 102/170 (60%), Positives = 121/170 (71%), Gaps = 10/170 (5%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E +HEILMNLKEIVL+S+ YGIR+ SI GP VTAQ+I+LPPSV I+D TQHIAN+ +
Sbjct: 82 ESIHEILMNLKEIVLRSDAYGIREGSIHVVGPKKVTAQDIMLPPSVRIIDTTQHIANINK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGS----------YNIDAIFMPVRNANHSIHSYVN 189
I L I LQIE+ RGY I N+ + IDA F PV+N N+SIHSY +
Sbjct: 142 SITLDISLQIEKGRGYIIQNPNNYNPKDEIFAIDAAFVFPIDAAFAPVQNVNYSIHSYWS 201
Query: 188 GNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFEN 39
NE QEILFLEIWTNG L PKEALYEASRNLID F+PFL+A+EE + N
Sbjct: 202 ENETQEILFLEIWTNGGLAPKEALYEASRNLIDFFLPFLNAKEENSDGTN 251
[187][TOP]
>UniRef100_A2T365 DNA-directed RNA polymerase subunit alpha n=1 Tax=Angiopteris
evecta RepID=RPOA_ANGEV
Length = 341
Score = 191 bits (486), Expect = 2e-47
Identities = 91/156 (58%), Positives = 123/156 (78%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E +++IL+N KEIVL+S+ Y + A I GP +TA++I+LPPSV +D++QHIA +T+
Sbjct: 82 ESINDILINFKEIVLRSDSYETQKAYISITGPKDITAEDILLPPSVQAIDDSQHIATITK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I L I ++I++DRGYRI K Q G + IDA+FMP+R AN+S+HS+ N + QEILF+
Sbjct: 142 DITLDIEIEIQKDRGYRIQDSKESQAGEFFIDAVFMPIRKANYSVHSFGNNKKFQEILFI 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKL 51
EIWT+GSLTPKEALYEASRNLIDLF+PFLH EEE++
Sbjct: 202 EIWTDGSLTPKEALYEASRNLIDLFLPFLHTEEEEI 237
[188][TOP]
>UniRef100_Q85A01 DNA-directed RNA polymerase subunit alpha n=1 Tax=Anthoceros
formosae RepID=RPOA_ANTFO
Length = 340
Score = 189 bits (481), Expect = 7e-47
Identities = 91/157 (57%), Positives = 122/157 (77%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+IL+NLKEIVLKSN Y ++ASI GP VTA++I+LP SV ++D TQHIA +T+
Sbjct: 82 ESVHDILINLKEIVLKSNSYKTQEASISILGPKRVTAEDIVLPSSVEVIDATQHIATITK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
+ I L I +DRGYRI ++DG++ ++A F P+RNAN+S+HS+ N EKQEILF+
Sbjct: 142 AVYFNIKLGIRKDRGYRIENPVKYEDGNFAVNAAFTPIRNANYSVHSFENEKEKQEILFI 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 48
E+WTNGSLTPKEAL EAS++LI+LFIP LH ++E+ N
Sbjct: 202 EVWTNGSLTPKEALREASQSLINLFIPLLHEKKEREN 238
[189][TOP]
>UniRef100_Q5EFZ1 RNA polymerase alpha subunit n=1 Tax=Buxbaumia aphylla
RepID=Q5EFZ1_9BRYO
Length = 340
Score = 186 bits (472), Expect = 8e-46
Identities = 93/156 (59%), Positives = 119/156 (76%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+I +N KEIVL+SN + A I GP +TAQ+IILPPSV I+D Q+IA +T+
Sbjct: 82 ESVHDISINSKEIVLESNSSETQKAFISILGPKKITAQDIILPPSVKIIDGKQYIATLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
IQL I L+IE+D GYRI + + IDAIFMP+RNAN+S+HS+ N N+ QE+LF+
Sbjct: 142 AIQLDIELEIEKDYGYRIQNSNKSTNSHFFIDAIFMPIRNANYSVHSFENENKTQEMLFI 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKL 51
EIWTNGS+TPK+ALYEASR+LIDLFIPFLHAE ++
Sbjct: 202 EIWTNGSITPKDALYEASRSLIDLFIPFLHAERREI 237
[190][TOP]
>UniRef100_Q5EG69 RNA polymerase alpha subunit n=1 Tax=Sphagnum fimbriatum
RepID=Q5EG69_9BRYO
Length = 338
Score = 184 bits (467), Expect = 3e-45
Identities = 98/174 (56%), Positives = 126/174 (72%), Gaps = 6/174 (3%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKS--NLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANV 345
E V +IL+NLKEIVLKS N + A + GP VTA++II PPSV ++D TQ+IA +
Sbjct: 83 ESVRDILINLKEIVLKSKSNSCETQKAFLSIFGPKEVTARDIIFPPSVEVIDTTQYIATL 142
Query: 344 TEPIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEIL 165
T+ I L I L+IE+D GYR DG +++DA+F P+RNAN+S+HS+ N NE QEIL
Sbjct: 143 TKAIHLDIELKIEKDCGYRTQDSIKSADGYFSVDAVFTPIRNANYSVHSFENKNETQEIL 202
Query: 164 FLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKL----NFENMXHKVTLP 15
F+EIWTNGS+TPKEALYEASR+LIDLFIPFLHAE+E++ N N H + P
Sbjct: 203 FIEIWTNGSVTPKEALYEASRSLIDLFIPFLHAEKEEVMHDKNESNTLHFSSSP 256
[191][TOP]
>UniRef100_Q60F85 DNA-dependent RNA polymerase alpha subunit n=1 Tax=Sphagnum
girgensohnii RepID=Q60F85_9BRYO
Length = 341
Score = 183 bits (465), Expect = 5e-45
Identities = 93/158 (58%), Positives = 121/158 (76%), Gaps = 2/158 (1%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKS--NLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANV 345
E V +IL+NLKEIVLKS N + A + GP VTA++I+ PPSV ++D TQ+IA +
Sbjct: 83 ESVRDILINLKEIVLKSKSNSCETQKAFLSIFGPKEVTARDIVFPPSVEVIDTTQYIATL 142
Query: 344 TEPIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEIL 165
T+ I L I L+IE+D GYR DG +++DA+F P+RNAN+S+HS+ N NE QEIL
Sbjct: 143 TKAIHLDIELKIEKDCGYRTQDSIKSADGYFSVDAVFTPIRNANYSVHSFENKNETQEIL 202
Query: 164 FLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKL 51
F+EIWTNGS+TPKEALYEASR+LIDLFIPFLHAE+E++
Sbjct: 203 FIEIWTNGSVTPKEALYEASRSLIDLFIPFLHAEKEEV 240
[192][TOP]
>UniRef100_Q8WHZ1 DNA-directed RNA polymerase subunit alpha n=1 Tax=Psilotum nudum
RepID=RPOA_PSINU
Length = 340
Score = 176 bits (445), Expect = 1e-42
Identities = 91/155 (58%), Positives = 117/155 (75%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E +H+IL+NLKEIVL+S+ Y + ASI GP VTA +I+LP SV I+D +QHIA +T
Sbjct: 82 ESIHDILINLKEIVLQSDSYETQKASISILGPRDVTAGDILLPTSVKIIDASQHIATITT 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I L + L+IERD GYR LK Q G + IDA+F P+RNAN+SIHS+ + N+ +EILFL
Sbjct: 142 AIPLDVELRIERDCGYRTLNLKESQSGEFFIDALFTPIRNANYSIHSFESNNKVREILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEK 54
E+WTNGSLTP AL EASR+LIDLFI FL+ E+E+
Sbjct: 202 EVWTNGSLTPGAALSEASRDLIDLFIIFLNMEKEE 236
[193][TOP]
>UniRef100_P06270 DNA-directed RNA polymerase subunit alpha n=1 Tax=Marchantia
polymorpha RepID=RPOA_MARPO
Length = 340
Score = 174 bits (441), Expect = 3e-42
Identities = 87/158 (55%), Positives = 120/158 (75%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E +H+IL+NLKEIVLKS + + A I GP +TAQ+I P + I+ Q+IA + +
Sbjct: 82 ESIHDILINLKEIVLKSESFEPQKAYISVLGPKKITAQDIKGPSCIKIMIIAQYIATLNK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I L I L IE+DRGYRI L+ +Q+G + +DA+FMP+RNAN+S+HS+ + + +EILFL
Sbjct: 142 DILLEIELNIEKDRGYRIENLQKYQEGLFPVDAVFMPIRNANYSVHSFESEKKIKEILFL 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNF 45
EIWT+GSLTPKEALYEASRNLIDLFIP +++E+++ NF
Sbjct: 202 EIWTDGSLTPKEALYEASRNLIDLFIPLINSEKKEKNF 239
[194][TOP]
>UniRef100_A6BM49 RNA polymerase alpha subunit n=2 Tax=Spermatophyta
RepID=A6BM49_BRANA
Length = 326
Score = 173 bits (439), Expect = 5e-42
Identities = 89/156 (57%), Positives = 113/156 (72%), Gaps = 2/156 (1%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+IL+NLKEIVLKS LYGI ASIC GP VTAQ+IILP S+ I+D TQHIA++T+
Sbjct: 83 ESVHDILLNLKEIVLKSELYGIHKASICTVGPRNVTAQDIILPSSIKIIDGTQHIASLTK 142
Query: 338 PIQLCIGLQIERDRGYRI--NTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEIL 165
+ + L IER++GY I + + ++G + IDA MPVRN N SIHSY + N+ +E+L
Sbjct: 143 SVPFNVMLTIERNQGYAIPSQSSRRHKNGLFPIDAPCMPVRNVNFSIHSYKSENDIREML 202
Query: 164 FLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEE 57
EIWTNG LTP+EA YEA LIDL +P LH EE+
Sbjct: 203 IFEIWTNGGLTPREAFYEACWKLIDLIVPLLHMEED 238
[195][TOP]
>UniRef100_Q9BBN0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Marsilea
quadrifolia RepID=RPOA_MARQU
Length = 341
Score = 173 bits (439), Expect = 5e-42
Identities = 85/172 (49%), Positives = 124/172 (72%), Gaps = 1/172 (0%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E +H+IL+NLKEIVL+S+ G + A + GP VTA +I LPPSV ++D++Q+I +T+
Sbjct: 82 ETIHDILVNLKEIVLRSDSDGNQKAILSVTGPKRVTAGDISLPPSVKVIDDSQYIVTITQ 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI + I L IE D GYRI +L ++DG + +DA+FMPVRN N+S+H + +G E +EILF+
Sbjct: 142 PISVNIELNIECDCGYRIESLNEYRDGEFPVDAVFMPVRNVNYSVHPFGSGKEMREILFI 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKL-NFENMXHKVTLPLFT 6
E+WTNGSLTP EA+ +AS++ IDL PFLH + E + +FE+ +L F+
Sbjct: 202 EVWTNGSLTPTEAISKASKSSIDLLSPFLHTKHEDIPDFESNRDSSSLMKFS 253
[196][TOP]
>UniRef100_B0YPQ7 RNA polymerase alpha subunit n=1 Tax=Aneura mirabilis
RepID=B0YPQ7_ANEMR
Length = 342
Score = 169 bits (428), Expect = 1e-40
Identities = 82/157 (52%), Positives = 117/157 (74%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E +H+IL+NLKEI+L+S+ + A IC GP VTA++I + ++DNTQ++A +T
Sbjct: 83 ESIHDILINLKEIILRSDSPEPQKAYICVSGPSEVTARDIQGSSLIHVIDNTQYVATITG 142
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I L I L IE+DRGYR+ + +++G + IDA+FMP+RNAN+S+HS+ + + +EIL L
Sbjct: 143 KISLDIELDIEKDRGYRMENSRKYREGFFPIDAVFMPIRNANYSVHSFGSREKTKEILLL 202
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 48
EIWTNGSLTP++ALYEASRNLIDLFIP ++ E+ N
Sbjct: 203 EIWTNGSLTPEKALYEASRNLIDLFIPSMNPGGEEKN 239
[197][TOP]
>UniRef100_B7ZII6 RNA polymerase alpha chain n=1 Tax=Ephedra equisetina
RepID=B7ZII6_EPHEU
Length = 258
Score = 167 bits (424), Expect = 3e-40
Identities = 84/167 (50%), Positives = 117/167 (70%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+ILMNLK+IVL+S LYGI +ASIC GP VTAQ+IILP S+ I+D+TQHIA++T+
Sbjct: 83 ESVHDILMNLKQIVLRSELYGIHEASICTVGPKNVTAQDIILPSSIQIIDDTQHIASLTK 142
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I + L+IE+ + Y I +K +D + ID + +PV+N N SIHSY + + QE+L
Sbjct: 143 RIPFNVTLKIEKKKRYTIENMKQPKDIFFPIDGVSLPVQNVNFSIHSYKSSDNIQEMLIF 202
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTL 18
EIWTNG LTP+E +YEA +L+DL IP L E+ N + + ++L
Sbjct: 203 EIWTNGGLTPRETIYEACWSLLDLIIPLLCVEQNIKNSQKKPNPLSL 249
[198][TOP]
>UniRef100_Q5SD25 DNA-directed RNA polymerase subunit alpha n=1 Tax=Huperzia lucidula
RepID=RPOA_HUPLU
Length = 336
Score = 162 bits (409), Expect = 2e-38
Identities = 80/161 (49%), Positives = 118/161 (73%), Gaps = 2/161 (1%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+IL+N KEIVLKS + A I GP VTAQ+I LP SV ++D QHIA +T+
Sbjct: 85 ESVHDILINSKEIVLKSKSSEAQKAFISIVGPRRVTAQDIELPTSVEVIDPMQHIATITK 144
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEK--QEIL 165
++L I L+IE+D GYR + ++DG++ +DA+F P+R+ N+SIH + + ++ +E+L
Sbjct: 145 KVKLNIELKIEKDSGYRRQNIVEYKDGNFTVDAVFTPIRSVNYSIHCFESHDKSIMKEML 204
Query: 164 FLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFE 42
EIW+NGS+TP+EA+YEASR+ I+LF+PFL AE+EK +F+
Sbjct: 205 LYEIWSNGSITPEEAIYEASRSSINLFLPFLQAEKEKEDFK 245
[199][TOP]
>UniRef100_C5HY86 RNA polymerase a-subunit n=1 Tax=Alsophila spinulosa
RepID=C5HY86_9FILI
Length = 338
Score = 161 bits (408), Expect = 2e-38
Identities = 80/161 (49%), Positives = 114/161 (70%), Gaps = 1/161 (0%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E +H+I +NLKE V +S+ ++A + GP VTA + LPPSV I+D++Q+I +T+
Sbjct: 82 ETIHDISVNLKETVPRSDSNDSKEAFLSVTGPKRVTAGDTSLPPSVKIIDDSQYIVTITQ 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI + I +IE+D GYRI ++DG + +DA+ MPVRN N+S+H + +G E +EI F+
Sbjct: 142 PISVNIESRIEKDCGYRIEEFNGYRDGEFPVDAVPMPVRNVNYSVHPFGSGREMREISFI 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKL-NFEN 39
EIWTNGS TP EAL EAS+NLIDL IPFLH + E + +FE+
Sbjct: 202 EIWTNGSPTPNEALCEASKNLIDLLIPFLHMKHEDVPHFED 242
[200][TOP]
>UniRef100_P60315 DNA-directed RNA polymerase subunit alpha, chloroplastic n=2
Tax=Physcomitrella patens RepID=RPOA_PHYPA
Length = 450
Score = 160 bits (404), Expect = 6e-38
Identities = 84/162 (51%), Positives = 118/162 (72%), Gaps = 2/162 (1%)
Frame = -1
Query: 506 EILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTEPIQL 327
+IL+NLKE+V++S+ + A I GPG VTA +I+LPPS+ + D TQHIA +T+ + L
Sbjct: 198 DILVNLKELVIRSDSDEPQKAIISAIGPGPVTAGDIVLPPSLEVTDPTQHIAYLTKEVSL 257
Query: 326 CIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNE-KQEILFLEIW 150
I L +E+ GYR+ DG + ID++FMPVRNAN+S+HSY + + QEILFLEIW
Sbjct: 258 DIELDVEKGCGYRMGDHTKSGDGRFYIDSVFMPVRNANYSVHSYESEPDVTQEILFLEIW 317
Query: 149 TNGSLTPKEALYEASRNLIDLFIPFLHAEEEKL-NFENMXHK 27
TNGS+TP+EAL+EA+R LIDLF+PFLH +++++ N HK
Sbjct: 318 TNGSITPEEALHEAARCLIDLFLPFLHPKKKEVTNSATKMHK 359
[201][TOP]
>UniRef100_Q85FJ1 DNA-directed RNA polymerase subunit alpha n=1 Tax=Adiantum
capillus-veneris RepID=RPOA_ADICA
Length = 345
Score = 159 bits (401), Expect = 1e-37
Identities = 83/162 (51%), Positives = 112/162 (69%), Gaps = 2/162 (1%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLY-GIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVT 342
E +H++L+NLKEIVL+ + I++A + GP VTA ++ LPP V +DN+Q+IA +T
Sbjct: 82 ETIHDVLVNLKEIVLRGDSKEDIQEAFLSVTGPKEVTAGDLSLPPGVEAIDNSQYIATIT 141
Query: 341 EPIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILF 162
+PI L I L+IE+D GYRI L G + IDA+FMPVRN N+SIH + +G QEILF
Sbjct: 142 QPISLTIELEIEKDCGYRIENLAKSGKGQFPIDAVFMPVRNVNYSIHLFGSGRATQEILF 201
Query: 161 LEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN-FEN 39
+EIWTNGSLTP EAL +AS L+DL FL+ ++ FEN
Sbjct: 202 IEIWTNGSLTPHEALRKASEKLMDLLTTFLYVRGGDVSLFEN 243
[202][TOP]
>UniRef100_C7B2H8 RNA polymerase alpha chain n=1 Tax=Selaginella moellendorffii
RepID=C7B2H8_9TRAC
Length = 247
Score = 149 bits (376), Expect = 1e-34
Identities = 82/153 (53%), Positives = 107/153 (69%), Gaps = 3/153 (1%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGI-RDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVT 342
E VH+ILMNLKEIVLK+N + ++A I GP VTAQ+I+LPPSV +D TQHIA +T
Sbjct: 82 ESVHDILMNLKEIVLKTNPFSAAQEAHIPIVGPRKVTAQDIVLPPSVGTMDPTQHIATIT 141
Query: 341 EPIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVN--GNEKQEI 168
I IGL++ER G+R + +Q GS DA+FMP+R+AN+SIH + G +E+
Sbjct: 142 RKIHSSIGLRVERGCGFRKRNMIEYQKGSLPPDAVFMPIRHANYSIHRLGSHGGGIMKEM 201
Query: 167 LFLEIWTNGSLTPKEALYEASRNLIDLFIPFLH 69
L LE T+GS TP+EA+YEASRNL +LF PF H
Sbjct: 202 LLLEARTDGSPTPREAIYEASRNLANLFSPFPH 234
[203][TOP]
>UniRef100_Q32RM8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Zygnema
circumcarinatum RepID=RPOA_ZYGCR
Length = 356
Score = 136 bits (342), Expect = 1e-30
Identities = 72/153 (47%), Positives = 102/153 (66%), Gaps = 1/153 (0%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E +H+IL+NLK+IV KS+ ++ + F GPG VTAQ+I LPP V +VDNTQ+IA +
Sbjct: 79 ESIHDILLNLKDIVFKSDTLERQEGILLFNGPGIVTAQHIKLPPVVQVVDNTQYIARLEM 138
Query: 338 PIQLCIGLQIERDRGYR-INTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILF 162
P + I + +E + +NT+ + G + +DA PVRN N+SIHS G+ +QE+L
Sbjct: 139 PTSIEIHITLENTKTCTSLNTMPTTK-GRFILDAALKPVRNMNYSIHSLGEGDMRQEMLV 197
Query: 161 LEIWTNGSLTPKEALYEASRNLIDLFIPFLHAE 63
LE+WTNGSLTP+E + +AS+NL DL P L E
Sbjct: 198 LEVWTNGSLTPQEVISQASQNLNDLLKPLLKVE 230
[204][TOP]
>UniRef100_A9SHY0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SHY0_PHYPA
Length = 438
Score = 134 bits (336), Expect = 5e-30
Identities = 68/152 (44%), Positives = 105/152 (69%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V +IL+N++++ + SN + + A I GP V A +I+ PPS+V+ D +Q+IA VT
Sbjct: 183 ETVQDILLNVRDVAIGSNTHEPQKAFISVMGPRQVIAGDILCPPSLVVPDPSQNIALVTA 242
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I + +++E+D GYRI +G + ID++FMPV AN+S+HS+ + +EILFL
Sbjct: 243 AIPFNVEIEVEKDVGYRIVDPGKSTNGRFYIDSVFMPVVQANYSVHSFEVEDVTREILFL 302
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAE 63
EI+TNGS++P+EAL EA+R+LIDL +P L +E
Sbjct: 303 EIYTNGSISPEEALIEAARSLIDLLLPLLESE 334
[205][TOP]
>UniRef100_A9CP51 DNA-directed RNA polymerase alpha chain n=1 Tax=Physcomitrella
patens RepID=A9CP51_PHYPA
Length = 525
Score = 134 bits (336), Expect = 5e-30
Identities = 68/152 (44%), Positives = 105/152 (69%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V +IL+N++++ + SN + + A I GP V A +I+ PPS+V+ D +Q+IA VT
Sbjct: 270 ETVQDILLNVRDVAIGSNTHEPQKAFISVMGPRQVIAGDILCPPSLVVPDPSQNIALVTA 329
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
I + +++E+D GYRI +G + ID++FMPV AN+S+HS+ + +EILFL
Sbjct: 330 AIPFNVEIEVEKDVGYRIVDPGKSTNGRFYIDSVFMPVVQANYSVHSFEVEDVTREILFL 389
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAE 63
EI+TNGS++P+EAL EA+R+LIDL +P L +E
Sbjct: 390 EIYTNGSISPEEALIEAARSLIDLLLPLLESE 421
[206][TOP]
>UniRef100_B2Y1Z1 RNA polymerase alpha chain n=1 Tax=Welwitschia mirabilis
RepID=B2Y1Z1_WELMI
Length = 340
Score = 133 bits (334), Expect = 8e-30
Identities = 77/174 (44%), Positives = 109/174 (62%), Gaps = 5/174 (2%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+I+MNL+EIV + L+GI A I GP VTAQ+IILPP + IVD TQHIA++T+
Sbjct: 86 ESVHDIIMNLREIVFRCELHGIHKAYIYTVGPKNVTAQDIILPPFIQIVDGTQHIASITK 145
Query: 338 PIQLCIGLQIERDRG---YRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQ-- 174
PI L + L+IE++ G I+ + + + +MPVR+ ++++ Y + +
Sbjct: 146 PIHLHVTLKIEKNWGETTESIHPITKYFTRYIPTEIFYMPVRSVTYNVYFYKDEYDIHIY 205
Query: 173 EILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENMXHKVTLPL 12
+IL E+WTNG LTPKEALYEA LIDL IP L + L+ E K ++PL
Sbjct: 206 DILIFELWTNGELTPKEALYEACWRLIDLIIPLL--DVPLLHVEGSGVKESIPL 257
[207][TOP]
>UniRef100_Q1ACG7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Chara vulgaris
RepID=RPOA_CHAVU
Length = 358
Score = 133 bits (334), Expect = 8e-30
Identities = 66/157 (42%), Positives = 101/157 (64%), Gaps = 1/157 (0%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E + +IL+NLKEIV K + I KGP +TA +I + P + I+D+ Q IA++TE
Sbjct: 79 ESIQDILLNLKEIVFKGVCDKTQKGFIFVKGPKKITASDIQIEPCIEILDSNQIIAHLTE 138
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVN-GNEKQEILF 162
PI + L IE+ G+R+ S++IDAIFMP+RN N+SIH G+ K E+L
Sbjct: 139 PIDFKVELTIEKSMGFRLQNATQISKDSFSIDAIFMPIRNVNYSIHPVEKAGDWKSELLI 198
Query: 161 LEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKL 51
LEIWTNGS+TPKEA ++AS ++++F+ ++ + ++
Sbjct: 199 LEIWTNGSITPKEAFHQASEKIMNIFLSLSNSSDNQI 235
[208][TOP]
>UniRef100_Q8M9V7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Chaetosphaeridium
globosum RepID=RPOA_CHAGL
Length = 334
Score = 130 bits (328), Expect = 4e-29
Identities = 62/156 (39%), Positives = 102/156 (65%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+IL+NLK+I+L S+ GI + + GP V A ++ LP + IV+ Q+IA V +
Sbjct: 82 ESVHDILINLKKIILSSSFSGIFEGFLSVVGPKTVLASDLNLPSFIKIVNPDQYIATVNK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI + + I++ +GY + + + G + +D +F+P+R+ N+SIHS+ + +E L +
Sbjct: 142 PINFNLQIYIQKGKGYSLKNPISIKQGFFLVDPVFIPIRSVNYSIHSFEDEKATKEFLIV 201
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKL 51
E+WTNGS+ PKEA+ EAS NL++LF P + E ++L
Sbjct: 202 EVWTNGSIEPKEAIKEASYNLVNLFTPLVSQEYQQL 237
[209][TOP]
>UniRef100_O98462 DNA-directed RNA polymerase subunit alpha n=1 Tax=Spirogyra maxima
RepID=RPOA_SPIMX
Length = 344
Score = 129 bits (323), Expect = 2e-28
Identities = 67/154 (43%), Positives = 98/154 (63%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E +H+IL+NLK++++K+ + + I GP VTA +I L ++ I + HIA +T+
Sbjct: 84 ESIHDILLNLKQVIIKNKICEFQKCLISIIGPKKVTAADIELSQNITISNPYHHIATITK 143
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFL 159
PI+ + L I + RGY I + QDG + +DA+F PVRN N SIH N E+QE L L
Sbjct: 144 PIRFQVELIINKGRGYLIQDGNDVQDGYFPVDALFNPVRNVNFSIH---NLAEQQEALIL 200
Query: 158 EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEE 57
EIWTNG++TP +AL + S NLI LF+P E++
Sbjct: 201 EIWTNGAITPLDALRQGSENLIHLFLPPFGLEDD 234
[210][TOP]
>UniRef100_Q5EFY5 RNA polymerase alpha subunit (Fragment) n=1 Tax=Andreaea rupestris
RepID=Q5EFY5_9BRYO
Length = 195
Score = 125 bits (315), Expect = 1e-27
Identities = 64/113 (56%), Positives = 82/113 (72%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VH+IL+N KEIVLKSN Y + A I GP +TAQ+IILPPSV I+D TQ+IA +T+
Sbjct: 82 ESVHDILINSKEIVLKSNSYETQKAFISILGPKKITAQDIILPPSVKIIDTTQYIATLTK 141
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNE 180
I L I +IE+D GYRI K DG + +DA+FMP+RNAN+SIHS+ N N+
Sbjct: 142 AIHLDIESEIEKDCGYRIQDSKKSTDGLFFVDAVFMPIRNANYSIHSFENKNK 194
[211][TOP]
>UniRef100_A7Q481 Chromosome chr9 scaffold_49, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7Q481_VITVI
Length = 150
Score = 113 bits (282), Expect = 9e-24
Identities = 63/135 (46%), Positives = 86/135 (63%), Gaps = 5/135 (3%)
Frame = -1
Query: 494 NLKEIVLKSNLYG-IRDASICFKGPGYVTAQNIILPPSVVIVDNTQH----IANVTEPIQ 330
N K + + S+ G + D + K GY + L + ++ N + IA + +PI
Sbjct: 14 NNKMLFVTSSFVGWLIDHILFMKWSGYDKILLLDLMYLLDLISNNNYSTILIARLKKPID 73
Query: 329 LCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFLEIW 150
LCIGLQI+R+ Y + NFQDGSY ID +FM V+NANH+IH Y N NE+QEILFL++W
Sbjct: 74 LCIGLQIKRNCKYSMKRPNNFQDGSYPIDTVFMSVQNANHNIHFYGNVNERQEILFLKLW 133
Query: 149 TNGSLTPKEALYEAS 105
TN +LTPKEA +EAS
Sbjct: 134 TNKNLTPKEAFHEAS 148
[212][TOP]
>UniRef100_Q33616 Orf protein (Fragment) n=1 Tax=Musa balbisiana RepID=Q33616_MUSBA
Length = 67
Score = 111 bits (278), Expect = 3e-23
Identities = 53/67 (79%), Positives = 60/67 (89%)
Frame = -1
Query: 500 LMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTEPIQLCI 321
L+NLKEIVL+SN+YG+RDASIC +GP YVTAQ+II PPSV IVD TQHIAN+TEPI LCI
Sbjct: 1 LLNLKEIVLRSNIYGVRDASICARGPKYVTAQDIISPPSVEIVDTTQHIANLTEPIDLCI 60
Query: 320 GLQIERD 300
GLQI RD
Sbjct: 61 GLQIRRD 67
[213][TOP]
>UniRef100_Q32RU7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Staurastrum
punctulatum RepID=RPOA_STAPU
Length = 383
Score = 109 bits (273), Expect = 1e-22
Identities = 71/164 (43%), Positives = 94/164 (57%), Gaps = 12/164 (7%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNL--------YGIRDASICFKGPGYVTAQNIILPPSVVIVDNT 363
E V EIL+NLK+IV+K + ASI +GPG VTA++I P S++ VD
Sbjct: 82 ESVDEILLNLKQIVIKGAKGASITPLDHKEYRASIFAQGPGVVTAEHIKFPSSILAVDPD 141
Query: 362 QHIANVTEPIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGN 183
Q IA + QLCI L I + ++ K G + IDA F PV+ AN SIHS +
Sbjct: 142 QSIATLLNETQLCIELFIRQGIAKQLTRTKKNHQGFF-IDANFTPVQKANFSIHSVGDPK 200
Query: 182 EKQEILFLEIWTNGSLTPKEALYEASRNLIDLF----IPFLHAE 63
Q++L LEIWTN +LTP EALY+A +L++LF P LH E
Sbjct: 201 GLQQLLLLEIWTNKTLTPAEALYQAHASLLNLFHQISPPLLHKE 244
[214][TOP]
>UniRef100_Q2JUJ5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Synechococcus sp.
JA-3-3Ab RepID=RPOA_SYNJA
Length = 331
Score = 109 bits (272), Expect = 1e-22
Identities = 63/151 (41%), Positives = 93/151 (61%), Gaps = 4/151 (2%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+N+KE+VL+SN + + +GPG VTA+ + LP V +++ HIA + E
Sbjct: 91 EDVMEILLNMKELVLRSNAPDTQVGRLVAQGPGEVTAEKLQLPSEVEVINPRHHIATLAE 150
Query: 338 PIQLCIGLQIERDRGYR---INTLKNFQDGSYNIDAIFMPVRNANHSIH-SYVNGNEKQE 171
L + I R RGYR + K+ ID++FMPVR N+++ + V + +++
Sbjct: 151 GAILEMEFMIGRGRGYRAVDYSDSKSMAIDFLQIDSVFMPVRKVNYTVEAARVGQSLEKD 210
Query: 170 ILFLEIWTNGSLTPKEALYEASRNLIDLFIP 78
L LEIWTNGSLTP+EAL +A+R L+ LF P
Sbjct: 211 RLILEIWTNGSLTPQEALSQAARILVGLFSP 241
[215][TOP]
>UniRef100_P48118 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cyanophora
paradoxa RepID=RPOA_CYAPA
Length = 315
Score = 107 bits (267), Expect = 5e-22
Identities = 66/163 (40%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V E+L+NLK IVLKS + + +G VT N LP V I+ TQ++A V E
Sbjct: 73 EDVLELLLNLKNIVLKSYTNEPQIGRLKIQGACKVTTANFELPSEVEIIHGTQYVATVAE 132
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDG--SYNIDAIFMPVRNANHSIHS-YVNGNEKQEI 168
L + +IE+ RGY+I K ++ IDAIFMPVR N+ + ++ +E +E
Sbjct: 133 NAILEMEFKIEKGRGYKIIDKKQTENSIDFLPIDAIFMPVRKVNYMVEEIFLRNSEIKER 192
Query: 167 LFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFEN 39
L LEIW NGS+TP++++ +A+ L++LF PF +K+NFEN
Sbjct: 193 LILEIWRNGSVTPQDSISQAAEVLLNLFNPF-----KKINFEN 230
[216][TOP]
>UniRef100_A0YJS0 DNA-directed RNA polymerase alpha subunit n=1 Tax=Lyngbya sp. PCC
8106 RepID=A0YJS0_9CYAN
Length = 314
Score = 107 bits (266), Expect = 6e-22
Identities = 64/151 (42%), Positives = 92/151 (60%), Gaps = 4/151 (2%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIVL S + + +GP VTA + LP V +VD Q+IA ++
Sbjct: 73 EDVLEILLNLKEIVLNSYSNQRQIGRLLVQGPATVTAGHFDLPSEVEVVDKNQYIATLSP 132
Query: 338 PIQLCIGLQIERDRGYRI---NTLKNFQDGSYNIDAIFMPVRNANHSIH-SYVNGNEKQE 171
L + Q+E+ GYR N + IDA+FMPVR N+++ + V G+ +++
Sbjct: 133 GSTLEMEFQVEKGTGYRAIDRNRDEATAVDFLQIDAVFMPVRKVNYTVEDARVGGSLEKD 192
Query: 170 ILFLEIWTNGSLTPKEALYEASRNLIDLFIP 78
L L+IWTNGSLTP+EAL +A+ L+DLF+P
Sbjct: 193 RLILDIWTNGSLTPQEALSQAATILVDLFVP 223
[217][TOP]
>UniRef100_Q2WGF4 RNA polymerase alpha chain like (Fragment) n=1 Tax=Selaginella
uncinata RepID=Q2WGF4_SELUN
Length = 245
Score = 106 bits (264), Expect = 1e-21
Identities = 64/149 (42%), Positives = 87/149 (58%), Gaps = 2/149 (1%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E VHE MNLKEI L ++ ++A I GPG V A++ + P S+ I+ QH A VT
Sbjct: 81 ESVHETSMNLKEIALTAHPSAAQEAHIPIVGPGKVAARDTVPPSSIGIIYPAQHAATVTR 140
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYV--NGNEKQEIL 165
I+ G ++E GYR + +Q GS DA+ MP+RNAN+SIH +G +E+
Sbjct: 141 KIRSSTGSRVEGGCGYRRRNMVEYQKGSPPPDAVSMPIRNANYSIHRLESHSGGIMKEMP 200
Query: 164 FLEIWTNGSLTPKEALYEASRNLIDLFIP 78
E T+GS TP EA YEASR+ +LF P
Sbjct: 201 PPEARTDGSPTPGEATYEASRDSANLFSP 229
[218][TOP]
>UniRef100_P49465 DNA-directed RNA polymerase subunit alpha n=1 Tax=Odontella
sinensis RepID=RPOA_ODOSI
Length = 312
Score = 104 bits (259), Expect = 4e-21
Identities = 65/152 (42%), Positives = 86/152 (56%), Gaps = 3/152 (1%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E + EIL+NLK IVLKS ++ + KGP VTA I LP V IV+ +IA +T
Sbjct: 73 EDILEILLNLKGIVLKSKTNDLKFGRLKIKGPAVVTANCIQLPSEVEIVNPNHYIATITT 132
Query: 338 PIQLCIGLQIERDRGYRI--NTLKNFQDGSYNIDAIFMPVRNANHSIHS-YVNGNEKQEI 168
L I +IE GY++ T IDAIFMPV+ + I + Y N N+ E
Sbjct: 133 SNVLEIEFKIESGTGYKLAGQTFCKKSQDYLQIDAIFMPVQKVDFKIENIYDNSNDLTER 192
Query: 167 LFLEIWTNGSLTPKEALYEASRNLIDLFIPFL 72
LFL+IWTNGS++P+EA+ ASR +I F L
Sbjct: 193 LFLDIWTNGSMSPEEAVSSASRFIISFFSSLL 224
[219][TOP]
>UniRef100_B4B3P8 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Cyanothece sp.
PCC 7822 RepID=B4B3P8_9CHRO
Length = 314
Score = 103 bits (258), Expect = 5e-21
Identities = 62/159 (38%), Positives = 92/159 (57%), Gaps = 6/159 (3%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V E+++N+KEI LKS + + GP VTA LP V IVD +Q++A + E
Sbjct: 73 EDVMELILNMKEITLKSYTSQPQIGRLVATGPATVTAGQFDLPSEVEIVDPSQYVATLAE 132
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGS-----YNIDAIFMPVRNANHSIHSY-VNGNEK 177
+L + +IE+ +GYR ++ +D S ID++FMPV N+S+ V+G
Sbjct: 133 GSKLEMEFRIEKGKGYR--AIERGKDDSTSLDFLQIDSVFMPVTKVNYSVEDVRVDGTSS 190
Query: 176 QEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEE 60
++ L +EIWTNGS+ PKEAL EA+ ++DLF P E
Sbjct: 191 KDRLTIEIWTNGSVNPKEALSEAAAIIVDLFSPLRDLNE 229
[220][TOP]
>UniRef100_Q7NFF5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Gloeobacter
violaceus RepID=RPOA_GLOVI
Length = 314
Score = 103 bits (257), Expect = 7e-21
Identities = 64/152 (42%), Positives = 95/152 (62%), Gaps = 5/152 (3%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V +IL+N+KE+VL+S I+ + +GP VTA ++ LP V +V +IA + E
Sbjct: 73 EDVLDILLNMKELVLRSYTSDIQIGRLAVQGPKRVTAADLELPTEVQVVHPRHYIATLAE 132
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGS----YNIDAIFMPVRNANHSIHSYVN-GNEKQ 174
QL + QIER +GYR + +DG+ +IDAIFMPVR N ++ S + N +Q
Sbjct: 133 DGQLEMEFQIERGKGYRA-IERGSEDGAAIDYLSIDAIFMPVRKVNWTVESERSAANVEQ 191
Query: 173 EILFLEIWTNGSLTPKEALYEASRNLIDLFIP 78
+ L LEIWT+GSL+P+EAL +A++ L+D P
Sbjct: 192 DRLTLEIWTSGSLSPQEALSQAAKILVDQLRP 223
[221][TOP]
>UniRef100_Q3MF97 DNA-directed RNA polymerase subunit alpha n=1 Tax=Anabaena
variabilis ATCC 29413 RepID=RPOA_ANAVT
Length = 315
Score = 103 bits (257), Expect = 7e-21
Identities = 59/153 (38%), Positives = 94/153 (61%), Gaps = 6/153 (3%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EI+M +KE++LKS + + GP +TA + LP V ++D TQ++A + E
Sbjct: 73 EDVLEIIMRMKEVILKSYSSQAQIGRLLVNGPTTITASHFDLPSEVEVIDPTQYVATIAE 132
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGS-----YNIDAIFMPVRNANHSIHSY-VNGNEK 177
+L + +IER +GYR T++ ++ + ID+IFMPVR N+S+ +G+
Sbjct: 133 GGKLEMEFRIERGKGYR--TVERGREEATSLDFLQIDSIFMPVRKVNYSVEEVRADGSIP 190
Query: 176 QEILFLEIWTNGSLTPKEALYEASRNLIDLFIP 78
++ L LE+WTNGS++P+EAL A+ L+DLF P
Sbjct: 191 KDRLLLEVWTNGSISPQEALSSAAGILVDLFNP 223
[222][TOP]
>UniRef100_Q8YPK3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nostoc sp. PCC
7120 RepID=RPOA_ANASP
Length = 315
Score = 103 bits (257), Expect = 7e-21
Identities = 59/153 (38%), Positives = 94/153 (61%), Gaps = 6/153 (3%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EI+M +KE++LKS + + GP +TA + LP V ++D TQ++A + E
Sbjct: 73 EDVLEIIMRMKEVILKSYSSQAQIGRLLVNGPTTITASHFDLPSEVEVIDPTQYVATIAE 132
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGS-----YNIDAIFMPVRNANHSIHSY-VNGNEK 177
+L + +IER +GYR T++ ++ + ID+IFMPVR N+S+ +G+
Sbjct: 133 GGKLEMEFRIERGKGYR--TVERGREEATSLDFLQIDSIFMPVRKVNYSVEEVRADGSIP 190
Query: 176 QEILFLEIWTNGSLTPKEALYEASRNLIDLFIP 78
++ L LE+WTNGS++P+EAL A+ L+DLF P
Sbjct: 191 KDRLLLEVWTNGSISPQEALSSAAGILVDLFNP 223
[223][TOP]
>UniRef100_B0JY38 RNA polymerase alpha subunit n=1 Tax=Microcystis aeruginosa
NIES-843 RepID=B0JY38_MICAN
Length = 313
Score = 102 bits (255), Expect = 1e-20
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 6/166 (3%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V E+++N+KEI+LKS + + GP V A LP V IVD Q++A + E
Sbjct: 73 EDVMELMLNMKEIILKSYTNQTQIGRLVATGPATVVAAQFDLPSEVEIVDRNQYVATLAE 132
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYN---IDAIFMPVRNANHSIHSY-VNGNEKQE 171
+L + ++E+ +GYR + S + ID+IFMPV N+S+ + ++
Sbjct: 133 GAKLEMEFRVEKGKGYRAIDRSKDEATSLDFLQIDSIFMPVTKVNYSVEDIRSESGQARD 192
Query: 170 ILFLEIWTNGSLTPKEALYEASRNLIDLFIPF--LHAEEEKLNFEN 39
L LEIWTNGS+ PKEAL +A+ L++LF P L+A E NF++
Sbjct: 193 RLLLEIWTNGSINPKEALSQAADMLVNLFNPLKDLNALESSSNFDD 238
[224][TOP]
>UniRef100_C7QS38 DNA-directed RNA polymerase, alpha subunit n=2 Tax=Cyanothece
RepID=C7QS38_CYAP0
Length = 316
Score = 102 bits (255), Expect = 1e-20
Identities = 65/153 (42%), Positives = 88/153 (57%), Gaps = 6/153 (3%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EI++N+KEIVLKS + + G VTA N LP V +VD TQ++A +TE
Sbjct: 75 EDVLEIMLNMKEIVLKSYSDQAQIGRLVATSAGTVTAANFELPSEVEVVDPTQYVATLTE 134
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGS----YNIDAIFMPVRNANHSIHSYVNGN--EK 177
+L + +IE GY+ + DG+ IDA+FMPV N+ + + G E
Sbjct: 135 GSKLEMEFRIETGTGYK-GVERGKDDGTSLDFLEIDAVFMPVTKVNYIVED-IRGEHGEA 192
Query: 176 QEILFLEIWTNGSLTPKEALYEASRNLIDLFIP 78
Q+ L LEIWTNGS PKEAL EA+ ++DLF P
Sbjct: 193 QDRLILEIWTNGSFNPKEALSEAAEIVVDLFSP 225
[225][TOP]
>UniRef100_Q2KKK3 RNA polymerase alpha subunit (Fragment) n=1 Tax=Polytrichadelphus
purpureus RepID=Q2KKK3_9BRYO
Length = 165
Score = 102 bits (255), Expect = 1e-20
Identities = 45/61 (73%), Positives = 56/61 (91%)
Frame = -1
Query: 236 FMPVRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEE 57
FMP+RNAN+S+HS+ N N+ QEILF+EIWTNGS+TPKEALYEASR+L DLFIPFLH E++
Sbjct: 1 FMPIRNANYSVHSFENNNKIQEILFIEIWTNGSITPKEALYEASRSLXDLFIPFLHTEKK 60
Query: 56 K 54
+
Sbjct: 61 E 61
[226][TOP]
>UniRef100_B4VPM9 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Microcoleus
chthonoplastes PCC 7420 RepID=B4VPM9_9CYAN
Length = 315
Score = 102 bits (254), Expect = 2e-20
Identities = 60/156 (38%), Positives = 92/156 (58%), Gaps = 4/156 (2%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+N+KE+VLKS G + GP V + LP V VD Q+IA + +
Sbjct: 73 EDVLEILLNMKEVVLKSYTPGPHIGRVMITGPSTVRSAQFDLPSDVEFVDPGQYIATLAD 132
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYN---IDAIFMPVRNANHSIH-SYVNGNEKQE 171
+L + +IER +GYR + S + +DA+FMPV N+S+ + V+G+ +++
Sbjct: 133 GAKLEMEFRIERGKGYRSVERGRDETSSVDFLQLDAVFMPVTKVNYSVEDTRVDGSLEKD 192
Query: 170 ILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAE 63
L L++WTNGS++P+EAL +A+ L+DLF P E
Sbjct: 193 RLILDVWTNGSVSPQEALSQAANILVDLFNPLKDIE 228
[227][TOP]
>UniRef100_Q2JL74 DNA-directed RNA polymerase subunit alpha n=1 Tax=Synechococcus sp.
JA-2-3B'a(2-13) RepID=RPOA_SYNJB
Length = 335
Score = 102 bits (254), Expect = 2e-20
Identities = 61/151 (40%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+N+KE+VL+S+ + + +GPG VTA+ + LP V +++ HIA + E
Sbjct: 93 EDVMEILLNMKELVLRSSSPETQVGRLVAQGPGEVTAEKLQLPSDVEVINPRHHIATLAE 152
Query: 338 PIQLCIGLQIERDRGYR---INTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGN-EKQE 171
L + I R GYR + K ID++FMPVR N+++ + G +++
Sbjct: 153 GAILEMEFMIGRGHGYRAVDYSDSKAMAIDFLQIDSVFMPVRKVNYAVEAARVGQFLEKD 212
Query: 170 ILFLEIWTNGSLTPKEALYEASRNLIDLFIP 78
L LEIWTNGSLTP+EAL +A+R L+ LF P
Sbjct: 213 RLVLEIWTNGSLTPQEALSQAARILVGLFAP 243
[228][TOP]
>UniRef100_B5W6Q8 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Arthrospira
maxima CS-328 RepID=B5W6Q8_SPIMA
Length = 314
Score = 102 bits (253), Expect = 2e-20
Identities = 62/151 (41%), Positives = 91/151 (60%), Gaps = 6/151 (3%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EI++NLKE VLKS+ Y + + +GP VT + LP V +V+ Q+IA ++
Sbjct: 73 EDVLEIMLNLKEAVLKSHTYQKQIGRLLVQGPATVTVGHFDLPSEVEVVNKNQYIATLSP 132
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGS-----YNIDAIFMPVRNANHSIHSYVNGNE-K 177
L + QIE+ GYR + +D S IDAIFMPVR N+++ +G +
Sbjct: 133 GATLEMECQIEKGTGYR--AVDRHRDDSAALDFLQIDAIFMPVRKVNYTVEDARDGGSLE 190
Query: 176 QEILFLEIWTNGSLTPKEALYEASRNLIDLF 84
++ L LEIWT+GSLTP+EA+ +A+ L+DLF
Sbjct: 191 KDRLTLEIWTSGSLTPQEAISQAAAILVDLF 221
[229][TOP]
>UniRef100_Q6J226 RNA polymerase alpha subunit (Fragment) n=1 Tax=Chaetoceros
gracilis RepID=Q6J226_9STRA
Length = 300
Score = 101 bits (251), Expect = 3e-20
Identities = 58/148 (39%), Positives = 88/148 (59%), Gaps = 3/148 (2%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E + EIL+NLK +V+KS I + KGP VTA +I LPP++ I++ +IA ++
Sbjct: 75 EDILEILLNLKGVVVKSATPDISFGRLKIKGPAVVTADSIQLPPNIEIINPNHYIATIST 134
Query: 338 PIQLCIGLQIERDRGYRI--NTLKNFQDGSYNIDAIFMPVRNANHSIHS-YVNGNEKQEI 168
L I + ER GY++ T + + IDAIFMP++ + I + Y N N E
Sbjct: 135 SNVLEIEFKFERGTGYKLAGQTFCDKSEDFLQIDAIFMPIQKVDFKIENVYDNSNSITER 194
Query: 167 LFLEIWTNGSLTPKEALYEASRNLIDLF 84
LFL+IWTNGS++P +A+ AS+ +I+ F
Sbjct: 195 LFLDIWTNGSISPDDAISYASKFIIEFF 222
[230][TOP]
>UniRef100_B9YIU5 DNA-directed RNA polymerase, alpha subunit n=1 Tax='Nostoc azollae'
0708 RepID=B9YIU5_ANAAZ
Length = 314
Score = 100 bits (250), Expect = 4e-20
Identities = 57/150 (38%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EILM +KE++LK+ + + GP VTA + LP V ++D TQ++A + +
Sbjct: 73 EDVLEILMRMKEVILKNYSSQPQIGRLLVNGPVTVTAAHFDLPSEVEVIDPTQYVATIAD 132
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYN---IDAIFMPVRNANHSIHSYVNGNEKQEI 168
+L + +IER +GYR + S + ID++FMPVR N+S+ ++
Sbjct: 133 GGKLEMEFRIERGKGYRTVERGREEATSLDFLQIDSVFMPVRKVNYSVEEARGDGSLKDR 192
Query: 167 LFLEIWTNGSLTPKEALYEASRNLIDLFIP 78
L LE+WTNGS++P+EAL A+ L+DLF P
Sbjct: 193 LLLEVWTNGSISPQEALSSAAGILVDLFNP 222
[231][TOP]
>UniRef100_A8YCU3 RpoA protein n=1 Tax=Microcystis aeruginosa PCC 7806
RepID=A8YCU3_MICAE
Length = 313
Score = 100 bits (250), Expect = 4e-20
Identities = 62/166 (37%), Positives = 93/166 (56%), Gaps = 6/166 (3%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V E+++N+KEI LKS + + GP V A LP V IVD Q++A + E
Sbjct: 73 EDVMELMLNMKEITLKSYTNQTQIGRLVATGPATVVAAQFDLPSEVEIVDRNQYVATLAE 132
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYN---IDAIFMPVRNANHSIHSY-VNGNEKQE 171
+L + ++E+ +GYR + S + ID+IFMPV N+S+ + ++
Sbjct: 133 GAKLEMEFRVEKGKGYRAIDRSKEEATSLDFLQIDSIFMPVTKVNYSVEDIRSESGQARD 192
Query: 170 ILFLEIWTNGSLTPKEALYEASRNLIDLFIPF--LHAEEEKLNFEN 39
L LEIWTNGS+ PKEAL +A+ L++LF P L+A E NF++
Sbjct: 193 RLLLEIWTNGSINPKEALSQAADMLVNLFNPLKDLNALESSGNFDD 238
[232][TOP]
>UniRef100_P73297 DNA-directed RNA polymerase subunit alpha n=1 Tax=Synechocystis sp.
PCC 6803 RepID=RPOA_SYNY3
Length = 314
Score = 100 bits (250), Expect = 4e-20
Identities = 59/157 (37%), Positives = 91/157 (57%), Gaps = 4/157 (2%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EI++N+KE+VLKS + + GPG VTA +P V ++D Q+IA + E
Sbjct: 73 EDVLEIMLNMKELVLKSYTDQPQIGRLTAIGPGTVTAAQFEVPSEVEVIDPNQYIATLAE 132
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYN---IDAIFMPVRNANHSIHSY-VNGNEKQE 171
+L + ++ER GYR+ ++ S + ID++FMPV N+++ +G ++
Sbjct: 133 GAKLEMEFRVERGVGYRVIERGKDENSSLDFLQIDSVFMPVTKVNYTVEDIRADGMSPKD 192
Query: 170 ILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEE 60
L L+IWTNGS+ P+EAL EAS + +LFIP E
Sbjct: 193 RLILDIWTNGSIQPREALSEASDIIANLFIPLKDLNE 229
[233][TOP]
>UniRef100_A2CI44 DNA-directed RNA polymerase subunit alpha n=1 Tax=Chlorokybus
atmophyticus RepID=RPOA_CHLAT
Length = 318
Score = 100 bits (250), Expect = 4e-20
Identities = 53/150 (35%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V +IL+NLKEIVLK+ + + +GP V A+++ LP S+ +VD Q+IA ++
Sbjct: 78 EAVLDILLNLKEIVLKTQSQETQRGHLSVQGPSTVLARDLQLPSSIELVDPDQYIATISG 137
Query: 338 PIQLCIGLQIERDRGYRI---NTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEI 168
+ L + +E +GY++ K FQ IDA+FMPV N+++ G+ QE
Sbjct: 138 RVSLNMEFTVEVGKGYQLPDYEKKKTFQVDVLPIDAVFMPVTKVNYTVEENYGGDRSQER 197
Query: 167 LFLEIWTNGSLTPKEALYEASRNLIDLFIP 78
+ +E+WTNGS+ ++A+ + +I+LF P
Sbjct: 198 VIIEVWTNGSINSRQAIDLSVNKIINLFSP 227
[234][TOP]
>UniRef100_B7KI11 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Cyanothece sp.
PCC 7424 RepID=B7KI11_CYAP7
Length = 314
Score = 100 bits (249), Expect = 6e-20
Identities = 57/159 (35%), Positives = 93/159 (58%), Gaps = 6/159 (3%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V E+++N+KEI LKS + + GP VTA +P + +VD +Q++A +++
Sbjct: 73 EDVMELILNMKEITLKSYTSQPQIGRLVATGPATVTAAQFDVPSEIEVVDPSQYVATLSD 132
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGS-----YNIDAIFMPVRNANHSIHSY-VNGNEK 177
+L + ++E+ +GYR ++ +D + ID++FMPV N+S+ V+G
Sbjct: 133 GSKLEMEFRVEKGKGYR--AIERGKDDTTSLDFLQIDSVFMPVTKVNYSVEDVRVDGTGS 190
Query: 176 QEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEE 60
++ L LEIWTNGS+ PKEAL EA+ ++DLF P E
Sbjct: 191 KDRLTLEIWTNGSINPKEALSEAAAIIVDLFSPLKDLNE 229
[235][TOP]
>UniRef100_B1XJI4 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Synechococcus
sp. PCC 7002 RepID=B1XJI4_SYNP2
Length = 313
Score = 100 bits (249), Expect = 6e-20
Identities = 59/152 (38%), Positives = 91/152 (59%), Gaps = 5/152 (3%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E EI++N+KEI+LKS + + + GPG VTA LP V +VD TQ+IA + +
Sbjct: 73 EDALEIILNMKEIILKSYTHQPQIGRLTATGPGQVTAAQFDLPSEVEVVDPTQYIATLAD 132
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGS----YNIDAIFMPVRNANHSIHS-YVNGNEKQ 174
+L + +IE+ + YR +N + + IDA+FMPV N+S+ S + G+ +
Sbjct: 133 GAKLEMEFRIEKGKSYRA-VQRNRDEATALDFLQIDAVFMPVTKVNYSVDSIHSEGDAVR 191
Query: 173 EILFLEIWTNGSLTPKEALYEASRNLIDLFIP 78
+ L LEIWTNGS+ P+EAL +A+ ++LF P
Sbjct: 192 DRLTLEIWTNGSIKPEEALSQAAAIAVELFNP 223
[236][TOP]
>UniRef100_Q9MUV0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Mesostigma viride
RepID=RPOA_MESVI
Length = 316
Score = 100 bits (248), Expect = 8e-20
Identities = 57/157 (36%), Positives = 85/157 (54%), Gaps = 3/157 (1%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIV ++ ++ + +GP V A N+ LP S+ +VD Q+IA ++
Sbjct: 78 ESVLEILLNLKEIVFRTKSLDVQKGYLSIQGPCVVKAANLQLPTSIEVVDGGQYIATLSG 137
Query: 338 PIQLCIGLQIERDRGYRINTL---KNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEI 168
L + I +GY++ KN S +DAIFMP+ N+ + E
Sbjct: 138 NANLDMEFVINTGKGYQMADYAIKKNSYISSLPVDAIFMPIHKVNYMVEQDHTSKFLTER 197
Query: 167 LFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEE 57
+ LEIWTNGS++P++AL + +IDLF P H E
Sbjct: 198 VILEIWTNGSISPRDALDIGIKKVIDLFNPLHHCSSE 234
[237][TOP]
>UniRef100_Q9TLV2 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cyanidium
caldarium RepID=RPOA_CYACA
Length = 310
Score = 99.4 bits (246), Expect = 1e-19
Identities = 57/151 (37%), Positives = 89/151 (58%), Gaps = 4/151 (2%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLK IVLK N+ + + +GP VT+ I P + +VD Q+IA ++
Sbjct: 77 EDVLEILLNLKNIVLKGNVLKNQIGRLKVQGPAIVTSGQIEFPLDITVVDPCQYIATISG 136
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGS----YNIDAIFMPVRNANHSIHSYVNGNEKQE 171
L + L++E+ GY++ ++ F S ID+IFMPV+ N+ + ++ E
Sbjct: 137 NDYLEMELKVEKSSGYKL--VETFSKKSPLDFLPIDSIFMPVKKVNYYVEEILDSKVAYE 194
Query: 170 ILFLEIWTNGSLTPKEALYEASRNLIDLFIP 78
L LE+WTNGSL+P++++ AS NL+ LF P
Sbjct: 195 KLILELWTNGSLSPQQSINYASDNLVKLFNP 225
[238][TOP]
>UniRef100_B2ITN1 DNA-directed RNA polymerase, alpha subunit RpoA n=1 Tax=Nostoc
punctiforme PCC 73102 RepID=B2ITN1_NOSP7
Length = 315
Score = 99.0 bits (245), Expect = 2e-19
Identities = 59/153 (38%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EILM +KE++LK+ + + GP +TA + LP V ++D TQ++A + E
Sbjct: 73 EDVLEILMRMKEVILKNYSSQPQIGRLLVSGPTTITAAHFDLPSEVEVIDPTQYVATIAE 132
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGS-----YNIDAIFMPVRNANHSI-HSYVNGNEK 177
+L + +IE+ +GYR T++ ++ + ID+IFMPVR N+S+ S G
Sbjct: 133 GGKLEMEFRIEKGKGYR--TVERGREEATSLDFLQIDSIFMPVRKVNYSVEESRGEGLIP 190
Query: 176 QEILFLEIWTNGSLTPKEALYEASRNLIDLFIP 78
++ L LE+WTNGS++P+EAL A+ L+DLF P
Sbjct: 191 KDRLLLEVWTNGSISPQEALSSAAGILVDLFNP 223
[239][TOP]
>UniRef100_B4WHD8 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Synechococcus
sp. PCC 7335 RepID=B4WHD8_9SYNE
Length = 315
Score = 99.0 bits (245), Expect = 2e-19
Identities = 57/151 (37%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V +IL+N+KE VLKS + + +GP VTA N LP V ++ ++IA+V
Sbjct: 73 EDVLDILLNMKETVLKSYSAQPQIGRLVVQGPAKVTAANFDLPSEVELISTDRYIASVAA 132
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGS---YNIDAIFMPVRNANHSIHSYVNGNE-KQE 171
+L + +IER +GY+ + G IDA+FMPVR N+S+ ++++ ++
Sbjct: 133 GHKLEMEFRIERGKGYKAIDRSREETGGVEFMQIDAVFMPVRKVNYSVENFIDPEGFPKD 192
Query: 170 ILFLEIWTNGSLTPKEALYEASRNLIDLFIP 78
L +EIWTNGSLT ++A+ EA+ L+D+F P
Sbjct: 193 RLVMEIWTNGSLTAQQAMSEAAALLVDMFNP 223
[240][TOP]
>UniRef100_B0C430 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Acaryochloris
marina MBIC11017 RepID=B0C430_ACAM1
Length = 313
Score = 97.8 bits (242), Expect = 4e-19
Identities = 58/156 (37%), Positives = 94/156 (60%), Gaps = 5/156 (3%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V +IL+N+K++VL+S+ + + +GP VT + LP V IV+ TQ++A ++
Sbjct: 73 EDVLDILLNMKQVVLRSHTNDPQIGRLFVQGPATVTTDDFELPTEVEIVNPTQYVATLSS 132
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGS----YNIDAIFMPVRNANHSIH-SYVNGNEKQ 174
L + +IE+ +GY KN + + IDAI+MPVR N+ + + V G ++
Sbjct: 133 DATLEMEFRIEQGKGYHA-VGKNRDEAAALDFLEIDAIYMPVRRVNYEVEDARVGGALEK 191
Query: 173 EILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHA 66
+ L L+IWTNG+LTP+E+L +A+ L+DLF P A
Sbjct: 192 DRLILDIWTNGNLTPQESLSQAATILVDLFNPLKDA 227
[241][TOP]
>UniRef100_Q6J225 RNA polymerase alpha subunit (Fragment) n=1 Tax=Thalassiosira sp.
Cleve BA153110 RepID=Q6J225_9STRA
Length = 300
Score = 97.8 bits (242), Expect = 4e-19
Identities = 63/163 (38%), Positives = 93/163 (57%), Gaps = 4/163 (2%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E + EIL+NLK IVLKS + A + GP +TA +I LPP V I++ +IA ++
Sbjct: 75 EDILEILLNLKGIVLKSKNSTRQFARLRLHGPAVITASSIQLPPDVEIINPNHYIATLSS 134
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYNI---DAIFMPVRNANHSIHS-YVNGNEKQE 171
L I +IE YR+ + F D N DAIFMP + + + + Y N N +E
Sbjct: 135 SHILEIEFKIESGHDYRLAN-ETFSDKLSNFIETDAIFMPDQKDDFKVENVYDNSNNVKE 193
Query: 170 ILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFE 42
+FL++WTNGS++P++A++ AS +IDL F E K+N E
Sbjct: 194 RVFLDVWTNGSISPEQAIFSASNLIIDL---FKSITEHKINQE 233
[242][TOP]
>UniRef100_Q6B8X4 DNA-directed RNA polymerase subunit alpha n=1 Tax=Gracilaria
tenuistipitata var. liui RepID=RPOA_GRATL
Length = 314
Score = 97.8 bits (242), Expect = 4e-19
Identities = 62/164 (37%), Positives = 95/164 (57%), Gaps = 4/164 (2%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLK++VLKS+ + I +GP +T +PP ++I+D Q+IA +
Sbjct: 73 EDVLEILLNLKKVVLKSHSDTPQIGRIRLQGPAIITTGLFEVPPEILIIDPQQYIATICN 132
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYN---IDAIFMPVRNANHSI-HSYVNGNEKQE 171
+ +IE+ GY++ K F S + IDA+FMPV N+++ ++ QE
Sbjct: 133 NTIFEMEFRIEKGSGYKL-VNKGFDKKSIDFLQIDAVFMPVTKFNYTVEEKKISPILIQE 191
Query: 170 ILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFEN 39
LFLE+WTNGSL+P+EA+ E ++ L LF P + LNF+N
Sbjct: 192 KLFLEVWTNGSLSPQEAISEGAQVLHSLFYPLTN-----LNFQN 230
[243][TOP]
>UniRef100_Q4C148 DNA-directed RNA polymerase n=1 Tax=Crocosphaera watsonii WH 8501
RepID=Q4C148_CROWT
Length = 314
Score = 96.7 bits (239), Expect = 8e-19
Identities = 63/153 (41%), Positives = 91/153 (59%), Gaps = 6/153 (3%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EI++N+KEIVLKS + + G +VTA LP V +V+ TQ IA +TE
Sbjct: 73 EDVLEIMLNMKEIVLKSYTEQPQIGRLVATGAAHVTAGQFELPSEVEVVNPTQPIATLTE 132
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGS----YNIDAIFMPVRNANHSIHSYVNG--NEK 177
+L + +IE+ GY + ++ ++ + IDA+FMPV N+S+ S + G E
Sbjct: 133 GAKLEMEFRIEKGVGY-VPVERSSEEPAALDFLQIDAVFMPVTKVNYSVES-IRGEEGEA 190
Query: 176 QEILFLEIWTNGSLTPKEALYEASRNLIDLFIP 78
++ L LEIWTNGS PKEAL +A+ L+DLF P
Sbjct: 191 KDRLMLEIWTNGSFNPKEALSKAADILVDLFNP 223
[244][TOP]
>UniRef100_Q6J224 RNA polymerase alpha subunit (Fragment) n=1 Tax=Thalassionema
frauenfeldii RepID=Q6J224_9STRA
Length = 298
Score = 96.3 bits (238), Expect = 1e-18
Identities = 62/159 (38%), Positives = 92/159 (57%), Gaps = 4/159 (2%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E + EIL+NLK IV+KS+ I+ + +GP +TA +I LP + IV+ +IA ++
Sbjct: 73 EDILEILLNLKGIVIKSDTTEIKFGRLKVQGPLVLTADSIDLPSGIKIVNPNHYIATIST 132
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYN---IDAIFMPVRNANHSIHS-YVNGNEKQE 171
I L + +IE GY++ + + F D + N ID+IFMPV+ N I + Y N E
Sbjct: 133 SINLELEFKIEHGIGYKLAS-QLFNDENKNFLQIDSIFMPVQKVNFKIENLYDADNSISE 191
Query: 170 ILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEK 54
L LEIWTNGS+ P EAL +A + +I+ F L + K
Sbjct: 192 RLILEIWTNGSIEPIEALKKACKIIINCFNSLLKTQNTK 230
[245][TOP]
>UniRef100_Q6J223 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cylindrotheca
fusiformis RepID=Q6J223_CYLFU
Length = 291
Score = 96.3 bits (238), Expect = 1e-18
Identities = 64/159 (40%), Positives = 89/159 (55%), Gaps = 4/159 (2%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E + EIL+NLK IVLKS + + +GP VTA I LP + IV+ ++ ++
Sbjct: 65 EDILEILLNLKGIVLKSKTQTAQFGRLKIQGPTVVTADLIQLPSDLEIVNPNHYLMTIST 124
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYN---IDAIFMPVRNANHSIHS-YVNGNEKQE 171
L I + E GY++ T + F D S N +D IFMPV+ N I + Y N N E
Sbjct: 125 SNVLEIEFKFEYGTGYKL-TSQAFLDESDNYLQLDTIFMPVQKVNFKIENVYDNNNNITE 183
Query: 170 ILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEK 54
+FL+IWTNGS++P EAL A++ IDLF L +E K
Sbjct: 184 QVFLDIWTNGSISPNEALKSAAQITIDLFELLLKNKETK 222
[246][TOP]
>UniRef100_O46914 DNA-directed RNA polymerase subunit alpha n=1 Tax=Guillardia theta
RepID=RPOA_GUITH
Length = 318
Score = 96.3 bits (238), Expect = 1e-18
Identities = 59/152 (38%), Positives = 87/152 (57%), Gaps = 5/152 (3%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EIL+NLKEIV L + +GP VTA++ LPP + ++D Q+IA +
Sbjct: 73 EDVLEILLNLKEIVFSGQLQESTIGRLTVQGPAIVTARSFELPPEIKLIDPEQYIATICG 132
Query: 338 PIQLCIGLQIERDRGYRI----NTLKNFQDGSYNIDAIFMPVRNANHSI-HSYVNGNEKQ 174
L + +IE GY+I N+ ++F+ +D++FMPV+ N I + N
Sbjct: 133 NNTLEMEFKIEVGSGYKIVEKDNSTEHFE--FLQVDSVFMPVKKVNFRIEETRGENNILN 190
Query: 173 EILFLEIWTNGSLTPKEALYEASRNLIDLFIP 78
E L L+IWTNGS++ KEA+ A+ NLI+LF P
Sbjct: 191 EQLILDIWTNGSISAKEAISNAADNLINLFSP 222
[247][TOP]
>UniRef100_A3IQ28 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cyanothece sp.
CCY0110 RepID=A3IQ28_9CHRO
Length = 314
Score = 95.1 bits (235), Expect = 2e-18
Identities = 62/153 (40%), Positives = 89/153 (58%), Gaps = 6/153 (3%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EI++N+KEIVLKS + + G +VTA LP V +++ TQ IA +TE
Sbjct: 73 EDVLEIMLNMKEIVLKSYTEQPQIGRLVATGAAHVTAGQFDLPSEVEVINPTQPIATLTE 132
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGS----YNIDAIFMPVRNANHSIHSYVNG--NEK 177
+L + +IE+ GY + ++ + + IDA+FMPV N+S+ S + G E
Sbjct: 133 GAKLEMEFRIEKGVGY-VPVERSSDEPTALDFLQIDAVFMPVTKVNYSVES-IRGEEGEA 190
Query: 176 QEILFLEIWTNGSLTPKEALYEASRNLIDLFIP 78
++ L LEIWTNGS PKEAL A+ L+DLF P
Sbjct: 191 KDRLMLEIWTNGSFNPKEALSRAADILVDLFNP 223
[248][TOP]
>UniRef100_A0T0Z4 DNA-directed RNA polymerase subunit alpha n=1 Tax=Thalassiosira
pseudonana RepID=RPOA_THAPS
Length = 313
Score = 95.1 bits (235), Expect = 2e-18
Identities = 62/169 (36%), Positives = 95/169 (56%), Gaps = 6/169 (3%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E + EIL+NLK IVLKS + + +GP +TA +I LPP + I++ +IA ++
Sbjct: 75 EDILEILLNLKGIVLKSKTPNRQFGRLRLQGPAVITASSIQLPPEIEIINPNHYIATISS 134
Query: 338 PIQLCIGLQIERDRGYRI-NTL--KNFQDGSYNIDAIFMPVRNANHSIHS-YVNGNEKQE 171
L I +IE YR+ N L F+D DAIFMPV+ + + + Y N N +E
Sbjct: 135 SHILEIEFKIESGSKYRLANELFSDKFED-FIETDAIFMPVQKVDFKVENVYDNSNNIKE 193
Query: 170 ILFLEIWTNGSLTPKEALYEASRNLIDLF--IPFLHAEEEKLNFENMXH 30
L ++IWTNGS++P++A++ S +I+LF I +EK N + H
Sbjct: 194 RLLIDIWTNGSISPEQAIFSGSNLIINLFKSIGEQKINKEKENIKEKNH 242
[249][TOP]
>UniRef100_B1WQT5 RNA polymerase alpha subunit n=1 Tax=Cyanothece sp. ATCC 51142
RepID=B1WQT5_CYAA5
Length = 314
Score = 94.7 bits (234), Expect = 3e-18
Identities = 62/152 (40%), Positives = 88/152 (57%), Gaps = 5/152 (3%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EI++N+KEIVLKS + + G +VTA LP V +++ TQ IA +TE
Sbjct: 73 EDVLEIMLNMKEIVLKSYTDQPQIGRLVATGAAHVTAGQFDLPSEVEVINPTQPIATLTE 132
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGSYN---IDAIFMPVRNANHSIHSYVNGNEKQ-- 174
+L + +IE+ GY + + + + IDA+FMPV N+S+ S + G E +
Sbjct: 133 GAKLEMEFRIEKGVGYVPVERSSDEPTALDFLQIDAVFMPVTKVNYSVES-IRGEEGEAK 191
Query: 173 EILFLEIWTNGSLTPKEALYEASRNLIDLFIP 78
+ L LEIWTNGS PKEAL A+ L+DLF P
Sbjct: 192 DRLMLEIWTNGSFNPKEALSRAADILVDLFNP 223
[250][TOP]
>UniRef100_A0ZG51 DNA-directed RNA polymerase alpha subunit n=1 Tax=Nodularia
spumigena CCY9414 RepID=A0ZG51_NODSP
Length = 315
Score = 94.7 bits (234), Expect = 3e-18
Identities = 55/153 (35%), Positives = 92/153 (60%), Gaps = 6/153 (3%)
Frame = -1
Query: 518 EPVHEILMNLKEIVLKSNLYGIRDASICFKGPGYVTAQNIILPPSVVIVDNTQHIANVTE 339
E V EILM +KE++L+S + + GP VT + LP V ++D TQ++A + E
Sbjct: 73 EDVLEILMKMKEVILRSYSSQPQIGRLLVNGPATVTVAHFDLPSEVEVIDQTQYVATLAE 132
Query: 338 PIQLCIGLQIERDRGYRINTLKNFQDGS-----YNIDAIFMPVRNANHSI-HSYVNGNEK 177
+L + +IE+ +GYR T++ ++ + ID++FMPVR N+S+ + +
Sbjct: 133 GGKLEMEFRIEKGKGYR--TVERGREEATSLDFLQIDSVFMPVRKVNYSVEEARGESSIP 190
Query: 176 QEILFLEIWTNGSLTPKEALYEASRNLIDLFIP 78
++ L LE+WTNGS++P+EAL A+ L++LF P
Sbjct: 191 KDRLLLEVWTNGSISPQEALSSAAGILVELFNP 223