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[1][TOP]
>UniRef100_Q99367 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99367_SOYBN
Length = 494
Score = 181 bits (460), Expect = 2e-44
Identities = 84/87 (96%), Positives = 86/87 (98%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG
Sbjct: 406 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 465
Query: 359 YSPSQPGYSPSSTSQYTPQTNDKDERG 279
YSPSQPGYSPSSTSQYTPQT+DKD+ G
Sbjct: 466 YSPSQPGYSPSSTSQYTPQTSDKDDGG 492
Score = 114 bits (284), Expect = 6e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 302 SPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS 361
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
GYSP+ P YSP+S S Y+P
Sbjct: 362 PGYSPTSPSYSPTSPS-YSP 380
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 295 SPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 354
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ PGYSP+S S Y+P
Sbjct: 355 PAYSPTSPGYSPTSPS-YSP 373
Score = 112 bits (281), Expect = 1e-23
Identities = 57/80 (71%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 253 SPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS 312
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 313 PAYSPTSPSYSPTSPS-YSP 331
Score = 112 bits (281), Expect = 1e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 274 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 333
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 334 PSYSPTSPSYSPTSPS-YSP 352
Score = 112 bits (280), Expect = 2e-23
Identities = 57/80 (71%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S SP YSP+SP +SP S
Sbjct: 218 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 277
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 278 PSYSPTSPSYSPTSPS-YSP 296
Score = 112 bits (280), Expect = 2e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 267 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTS 326
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 327 PSYSPTSPSYSPTSPS-YSP 345
Score = 112 bits (279), Expect = 2e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 260 SPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 319
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 320 PSYSPTSPSYSPTSPS-YSP 338
Score = 110 bits (276), Expect = 5e-23
Identities = 54/80 (67%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 316 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTS 375
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P S ++Y+P
Sbjct: 376 PSYSPTSPSYNPQS-AKYSP 394
Score = 110 bits (274), Expect = 8e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 246 SPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 305
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 306 PAYSPTSPAYSPTSPS-YSP 324
Score = 107 bits (267), Expect = 5e-22
Identities = 52/80 (65%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSP+SP YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 239 SPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 298
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 299 PSYSPTSPAYSPTSPA-YSP 317
Score = 107 bits (267), Expect = 5e-22
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSP+YSPTSP YSP+SP+YSP+SP S SP Y+P S ++SPS
Sbjct: 337 SPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSL 396
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSPS P SPS S Y+P
Sbjct: 397 AYSPSSPRLSPS--SPYSP 413
Score = 106 bits (265), Expect = 9e-22
Identities = 54/80 (67%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSP+SP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 211 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 270
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 271 PSYSPTSPSYSPTSPS-YSP 289
Score = 102 bits (253), Expect = 2e-20
Identities = 52/78 (66%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
Frame = -2
Query: 533 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 360
SSP YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S SP YSPSSP +SP S
Sbjct: 206 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 265
Query: 359 YSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 266 YSPTSPSYSPTSPS-YSP 282
Score = 85.9 bits (211), Expect = 2e-15
Identities = 50/90 (55%), Positives = 59/90 (65%), Gaps = 12/90 (13%)
Frame = -2
Query: 539 SPSSPYSPTSPN----------YSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYS 393
SP+ SPTS +SPTS P YSP+SP YSPSSP YSP+SP S SP YS
Sbjct: 180 SPNLRLSPTSDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYS 239
Query: 392 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
P+SP +SP S YSPS PGYSP+S + Y+P
Sbjct: 240 PTSPGYSPTSPTYSPSSPGYSPTSPA-YSP 268
Score = 60.8 bits (146), Expect = 6e-08
Identities = 45/87 (51%), Positives = 56/87 (64%), Gaps = 10/87 (11%)
Frame = -2
Query: 530 SPYSPTSPNY--SPTSPS-YSPT--SPSYSP-SSPTYSPSSPYNSGVSPD---YSPSSPQ 378
SP SPN SPTS + +SP ++SP SSP YSPSSP G SP YSP+SP
Sbjct: 174 SPSYLLSPNLRLSPTSDAQFSPYVGGMAFSPTSSPGYSPSSP---GYSPSSPGYSPTSPG 230
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTPQT 300
+SP S GYSP+ PGYSP+S + Y+P +
Sbjct: 231 YSPTSPGYSPTSPGYSPTSPT-YSPSS 256
[2][TOP]
>UniRef100_UPI0001985649 PREDICTED: similar to NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA
binding / DNA-directed RNA polymerase n=1 Tax=Vitis
vinifera RepID=UPI0001985649
Length = 1848
Score = 167 bits (423), Expect = 4e-40
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SPSSPYSPTSPNYSPTSPSYSPTSPSYSP+SPTYSP+SPYNSGVSPDYSPSSPQ+SPS G
Sbjct: 1760 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPASPTYSPTSPYNSGVSPDYSPSSPQYSPSAG 1819
Query: 359 YSPSQPGYSPSSTSQYTPQTNDKD 288
YSPS PGYSPSSTSQYTPQ ++KD
Sbjct: 1820 YSPSAPGYSPSSTSQYTPQMSNKD 1843
Score = 114 bits (284), Expect = 6e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1656 SPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS 1715
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
GYSP+ P YSP+S S Y+P
Sbjct: 1716 PGYSPTSPSYSPTSPS-YSP 1734
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1607 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTS 1666
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1667 PAYSPTSPSYSPTSPS-YSP 1685
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1649 SPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1708
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ PGYSP+S S Y+P
Sbjct: 1709 PAYSPTSPGYSPTSPS-YSP 1727
Score = 112 bits (280), Expect = 2e-23
Identities = 57/80 (71%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S SP YSP+SP +SP S
Sbjct: 1551 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 1610
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1611 PSYSPTSPSYSPTSPS-YSP 1629
Score = 112 bits (280), Expect = 2e-23
Identities = 55/80 (68%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1670 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTS 1729
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+PSS ++Y+P
Sbjct: 1730 PSYSPTSPSYNPSS-AKYSP 1748
Score = 111 bits (277), Expect = 4e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1593 SPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTS 1652
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1653 PSYSPTSPAYSPTSPA-YSP 1671
Score = 110 bits (276), Expect = 5e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1586 SPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1645
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1646 PVYSPTSPSYSPTSPA-YSP 1664
Score = 110 bits (275), Expect = 6e-23
Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1628 SPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 1687
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1688 PSYSPTSPSYSPTSPS-YSP 1706
Score = 108 bits (271), Expect = 2e-22
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1579 SPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1638
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1639 PSYSPTSPVYSPTSPS-YSP 1657
Score = 108 bits (271), Expect = 2e-22
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSP+YSPTSP YSP+SP+YSP+SP S SP Y+PSS ++SPS
Sbjct: 1691 SPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSL 1750
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSPS P SPS S Y+P
Sbjct: 1751 AYSPSSPRLSPS--SPYSP 1767
Score = 106 bits (265), Expect = 9e-22
Identities = 54/80 (67%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSP+SP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1544 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 1603
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1604 PSYSPTSPSYSPTSPS-YSP 1622
Score = 106 bits (264), Expect = 1e-21
Identities = 50/74 (67%), Positives = 60/74 (81%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSP+SP YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1572 SPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1631
Query: 365 TGYSPSQPGYSPSS 324
YSP+ P YSP+S
Sbjct: 1632 PSYSPTSPSYSPTS 1645
Score = 102 bits (253), Expect = 2e-20
Identities = 52/78 (66%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
Frame = -2
Query: 533 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 360
SSP YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S SP YSPSSP +SP S
Sbjct: 1539 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 1598
Query: 359 YSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1599 YSPTSPSYSPTSPS-YSP 1615
Score = 84.7 bits (208), Expect = 4e-15
Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
Frame = -2
Query: 503 YSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSP 330
+SPTS P YSP+SP YSPSSP YSP+SP S SP YSP+SP +SP S YSPS PGYSP
Sbjct: 1535 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 1594
Query: 329 SSTSQYTP 306
+S + Y+P
Sbjct: 1595 TSPA-YSP 1601
Score = 69.7 bits (169), Expect = 1e-10
Identities = 47/86 (54%), Positives = 55/86 (63%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSPYSP-TSPNYSPT--SPSYSPTS-PSYSPSSPTYSPSSPYNSG---VSPDYSPSSP 381
SP+ SP T +SP ++SPTS P YSPSSP YSPSSP G SP YSP+SP
Sbjct: 1513 SPNLRLSPITDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSP---GYSPTSPGYSPTSP 1569
Query: 380 QFSP-STGYSPSQPGYSPSSTSQYTP 306
+SP S GYSP+ P YSPSS Y+P
Sbjct: 1570 GYSPTSPGYSPTSPTYSPSSPG-YSP 1594
[3][TOP]
>UniRef100_Q99368 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99368_SOYBN
Length = 977
Score = 166 bits (421), Expect = 7e-40
Identities = 80/86 (93%), Positives = 82/86 (95%), Gaps = 1/86 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SPSSP SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSP+SPQFSPS
Sbjct: 892 SPSSPRLSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPTSPQFSPSA 951
Query: 362 GYSPSQPGYSPSSTSQYTPQTNDKDE 285
GYSPSQPGYSPSSTSQ TPQT+DKDE
Sbjct: 952 GYSPSQPGYSPSSTSQDTPQTSDKDE 977
Score = 107 bits (268), Expect = 4e-22
Identities = 55/80 (68%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP YSPTSP YSPTSP+YSPSSP YSP+SP S SP YSP+SP +SP S
Sbjct: 739 SPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPAYSPTS 798
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YS + P YSP+S S Y+P
Sbjct: 799 PAYSSTSPAYSPTSPS-YSP 817
Score = 107 bits (267), Expect = 5e-22
Identities = 53/81 (65%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
S S YSPTSP+YSPTSP+YSPTSPSYS +SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 803 STSPAYSPTSPSYSPTSPAYSPTSPSYSLTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 862
Query: 362 GYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSP+S S Y PQ+
Sbjct: 863 SYSPTSPSYSPTSPS-YNPQS 882
Score = 106 bits (265), Expect = 9e-22
Identities = 54/80 (67%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSP+SP YSPTSP YSPTSP YSP+SPTYSPSSP S SP YSP+SP +SP S
Sbjct: 732 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 791
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YS S++ Y+P
Sbjct: 792 PAYSPTSPAYS-STSPAYSP 810
Score = 106 bits (265), Expect = 9e-22
Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YS TSP+YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 788 SPTSPAYSPTSPAYSSTSPAYSPTSPSYSPTSPAYSPTSPSYSLTSPSYSPTSPSYSPTS 847
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 848 PSYSPTSPAYSPTSPS-YSP 866
Score = 105 bits (263), Expect = 2e-21
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 760 SPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSSTSPAYSPTSPSYSPTS 819
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YS +S S Y+P
Sbjct: 820 PAYSPTSPSYSLTSPS-YSP 838
Score = 101 bits (252), Expect = 3e-20
Identities = 52/82 (63%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YS TSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 816 SPTSPAYSPTSPSYSLTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTS 875
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
Y+P YSPS Y+P +
Sbjct: 876 PSYNPQSAKYSPSLA--YSPSS 895
Score = 99.4 bits (246), Expect = 1e-19
Identities = 49/75 (65%), Positives = 57/75 (76%), Gaps = 3/75 (4%)
Frame = -2
Query: 539 SPSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP- 369
SPSS YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP
Sbjct: 724 SPSSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 783
Query: 368 STGYSPSQPGYSPSS 324
S YSP+ P YSP+S
Sbjct: 784 SPSYSPTSPAYSPTS 798
Score = 85.5 bits (210), Expect = 2e-15
Identities = 44/76 (57%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYS 354
SPY +SP YSP+SP YSPSSP YSP+SP S SP YSP+SP +SPS+ GYS
Sbjct: 715 SPYVGGMAFSPSSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS 774
Query: 353 PSQPGYSPSSTSQYTP 306
P+ P YSP+S S Y+P
Sbjct: 775 PTSPAYSPTSPS-YSP 789
Score = 63.5 bits (153), Expect = 9e-09
Identities = 42/82 (51%), Positives = 50/82 (60%), Gaps = 7/82 (8%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSP-----SYSPSS-PTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP SPN + S + SP ++SPSS P YSPSSP S SP YSP+SP +SP
Sbjct: 695 SPSYLLSPNLRLSPSSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPSSPGYSPTSPGYSP 754
Query: 368 -STGYSPSQPGYSPSSTSQYTP 306
S GYSP+ P YSPSS Y+P
Sbjct: 755 TSPGYSPTSPTYSPSSPG-YSP 775
[4][TOP]
>UniRef100_B9SXC0 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9SXC0_RICCO
Length = 1855
Score = 165 bits (417), Expect = 2e-39
Identities = 78/86 (90%), Positives = 81/86 (94%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGV PDYSPSSPQ+SPS G
Sbjct: 1753 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVGPDYSPSSPQYSPSAG 1812
Query: 359 YSPSQPGYSPSSTSQYTPQTNDKDER 282
YSPS PGYSPSSTSQYT QT+ KD+R
Sbjct: 1813 YSPSAPGYSPSSTSQYT-QTSTKDDR 1837
Score = 114 bits (284), Expect = 6e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1649 SPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS 1708
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
GYSP+ P YSP+S S Y+P
Sbjct: 1709 PGYSPTSPSYSPTSPS-YSP 1727
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1642 SPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1701
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ PGYSP+S S Y+P
Sbjct: 1702 PAYSPTSPGYSPTSPS-YSP 1720
Score = 112 bits (280), Expect = 2e-23
Identities = 57/80 (71%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S SP YSP+SP +SP S
Sbjct: 1551 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 1610
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1611 PSYSPTSPSYSPTSPS-YSP 1629
Score = 112 bits (280), Expect = 2e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1593 SPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTS 1652
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1653 PAYSPTSPAYSPTSPS-YSP 1671
Score = 112 bits (279), Expect = 2e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1614 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTS 1673
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1674 PSYSPTSPSYSPTSPS-YSP 1692
Score = 110 bits (276), Expect = 5e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1586 SPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1645
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1646 PVYSPTSPAYSPTSPA-YSP 1664
Score = 110 bits (276), Expect = 5e-23
Identities = 54/80 (67%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1663 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTS 1722
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P S ++Y+P
Sbjct: 1723 PSYSPTSPSYNPQS-AKYSP 1741
Score = 107 bits (268), Expect = 4e-22
Identities = 53/80 (66%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1579 SPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1638
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1639 PSYSPTSPVYSPTSPA-YSP 1657
Score = 107 bits (267), Expect = 5e-22
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSP+YSPTSP YSP+SP+YSP+SP S SP Y+P S ++SPS
Sbjct: 1684 SPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSL 1743
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSPS P SPS S Y+P
Sbjct: 1744 AYSPSSPRLSPS--SPYSP 1760
Score = 106 bits (265), Expect = 9e-22
Identities = 54/80 (67%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSP+SP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1544 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 1603
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1604 PSYSPTSPSYSPTSPS-YSP 1622
Score = 106 bits (264), Expect = 1e-21
Identities = 50/74 (67%), Positives = 60/74 (81%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSP+SP YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1572 SPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1631
Query: 365 TGYSPSQPGYSPSS 324
YSP+ P YSP+S
Sbjct: 1632 PSYSPTSPSYSPTS 1645
Score = 101 bits (251), Expect = 4e-20
Identities = 50/77 (64%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S SP YSPSSP +SP S Y
Sbjct: 1540 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1599
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 1600 SPTSPSYSPTSPS-YSP 1615
Score = 99.8 bits (247), Expect = 1e-19
Identities = 59/104 (56%), Positives = 68/104 (65%), Gaps = 15/104 (14%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTY-------------SPSSPYNSGVSP 402
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+Y SPSSP S SP
Sbjct: 1698 SPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSP 1757
Query: 401 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDKDERGKD 273
YSP+SP +SP S YSP+ P YSPSS + Y+P + G D
Sbjct: 1758 -YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSGVGPD 1799
Score = 98.6 bits (244), Expect = 2e-19
Identities = 53/86 (61%), Positives = 63/86 (73%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1621 SPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 1680
Query: 365 TGYSPSQP---GYSPS---STSQYTP 306
YSP+ P SPS ++ Y+P
Sbjct: 1681 PSYSPTSPSYSPTSPSYSPTSPAYSP 1706
Score = 87.4 bits (215), Expect = 6e-16
Identities = 48/77 (62%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Frame = -2
Query: 530 SPYSPTSPNYSPT-SPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
SPY P +SPT SP YSP+SP YSPSSP YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1527 SPYVSGMP-FSPTLSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY 1585
Query: 356 SPSQPGYSPSSTSQYTP 306
SPS PGYSP+S + Y+P
Sbjct: 1586 SPSSPGYSPTSPA-YSP 1601
Score = 71.6 bits (174), Expect = 3e-11
Identities = 45/85 (52%), Positives = 56/85 (65%), Gaps = 5/85 (5%)
Frame = -2
Query: 539 SPSSPYSPTSP-NYSP--TSPSYSPT-SPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 372
SPS SPT+ +SP + +SPT SP YSPSSP YSPSSP YSP+SP +S
Sbjct: 1513 SPSLRLSPTTDAQFSPYVSGMPFSPTLSPGYSPSSPGYSPSSP-------GYSPTSPGYS 1565
Query: 371 P-STGYSPSQPGYSPSSTSQYTPQT 300
P S GYSP+ PGYSP+S + Y+P +
Sbjct: 1566 PTSPGYSPTSPGYSPTSPT-YSPSS 1589
[5][TOP]
>UniRef100_Q56Z04 DNA-directed RNA polymerase II largest chain (Fragment) n=1
Tax=Arabidopsis thaliana RepID=Q56Z04_ARATH
Length = 99
Score = 141 bits (356), Expect = 3e-32
Identities = 69/89 (77%), Positives = 74/89 (83%), Gaps = 1/89 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP+SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY+SG SPDYSPS+ G
Sbjct: 7 SPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-------G 59
Query: 359 YSPSQPGYSPSSTSQYTPQTND-KDERGK 276
YSP+ PGYSPSST QYTP D KD+ GK
Sbjct: 60 YSPTLPGYSPSSTGQYTPHEGDKKDKTGK 88
[6][TOP]
>UniRef100_P18616 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Arabidopsis
thaliana RepID=RPB1_ARATH
Length = 1840
Score = 141 bits (356), Expect = 3e-32
Identities = 69/89 (77%), Positives = 74/89 (83%), Gaps = 1/89 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP+SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY+SG SPDYSPS+ G
Sbjct: 1748 SPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-------G 1800
Query: 359 YSPSQPGYSPSSTSQYTPQTND-KDERGK 276
YSP+ PGYSPSST QYTP D KD+ GK
Sbjct: 1801 YSPTLPGYSPSSTGQYTPHEGDKKDKTGK 1829
Score = 114 bits (284), Expect = 6e-24
Identities = 58/88 (65%), Positives = 67/88 (76%), Gaps = 8/88 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1644 SPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS 1703
Query: 365 TGYSPSQPGYSPSSTS------QYTPQT 300
GYSP+ P YSP+S S Y PQ+
Sbjct: 1704 PGYSPTSPSYSPTSPSYGPTSPSYNPQS 1731
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1637 SPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1696
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ PGYSP+S S Y+P
Sbjct: 1697 PAYSPTSPGYSPTSPS-YSP 1715
Score = 112 bits (281), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1588 SPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS 1647
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1648 PAYSPTSPAYSPTSPS-YSP 1666
Score = 112 bits (280), Expect = 2e-23
Identities = 57/80 (71%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S SP YSP+SP +SP S
Sbjct: 1546 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 1605
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1606 PSYSPTSPSYSPTSPS-YSP 1624
Score = 112 bits (279), Expect = 2e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1581 SPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1640
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1641 PAYSPTSPAYSPTSPA-YSP 1659
Score = 112 bits (279), Expect = 2e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTS 1668
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1669 PSYSPTSPSYSPTSPS-YSP 1687
Score = 109 bits (272), Expect = 1e-22
Identities = 53/80 (66%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1658 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTS 1717
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y P+ P Y+P S ++Y+P
Sbjct: 1718 PSYGPTSPSYNPQS-AKYSP 1736
Score = 108 bits (271), Expect = 2e-22
Identities = 53/80 (66%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1574 SPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1633
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1634 PSYSPTSPAYSPTSPA-YSP 1652
Score = 107 bits (267), Expect = 5e-22
Identities = 52/80 (65%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSP+SP YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1567 SPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1626
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1627 PSYSPTSPSYSPTSPA-YSP 1645
Score = 103 bits (256), Expect = 1e-20
Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 3/81 (3%)
Frame = -2
Query: 539 SPSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP- 369
SPSS YSP+SP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP
Sbjct: 1538 SPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 1597
Query: 368 STGYSPSQPGYSPSSTSQYTP 306
S YSP+ P YSP+S S Y+P
Sbjct: 1598 SPSYSPTSPSYSPTSPS-YSP 1617
Score = 100 bits (250), Expect = 5e-20
Identities = 53/99 (53%), Positives = 65/99 (65%), Gaps = 21/99 (21%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF---- 375
SP+SP YSPTSP+YSPTSPSYSPTSP+YSP+SP YSP+SP S SP Y P+SP +
Sbjct: 1672 SPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQS 1731
Query: 374 ----------------SPSTGYSPSQPGYSPSSTSQYTP 306
SP++ YSP+ P YSP+S S Y+P
Sbjct: 1732 AKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPS-YSP 1769
Score = 99.8 bits (247), Expect = 1e-19
Identities = 53/86 (61%), Positives = 64/86 (74%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1616 SPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 1675
Query: 365 TGYSPSQP---GYSPS---STSQYTP 306
YSP+ P SPS ++ Y+P
Sbjct: 1676 PSYSPTSPSYSPTSPSYSPTSPAYSP 1701
Score = 84.3 bits (207), Expect = 5e-15
Identities = 43/76 (56%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYS 354
SPY +SP YSP+SP YSP+SP YSP+SP S SP YSP+SP +SPS+ GYS
Sbjct: 1529 SPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS 1588
Query: 353 PSQPGYSPSSTSQYTP 306
P+ P YSP+S S Y+P
Sbjct: 1589 PTSPAYSPTSPS-YSP 1603
[7][TOP]
>UniRef100_A7NVN8 Chromosome chr18 scaffold_1, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7NVN8_VITVI
Length = 89
Score = 139 bits (351), Expect = 1e-31
Identities = 64/76 (84%), Positives = 71/76 (93%)
Frame = -2
Query: 515 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGY 336
+S + SPTSPSYSPTSPSYSP+SPTYSP+SPYNSGVSPDYSPSSPQ+SPS GYSPS PGY
Sbjct: 9 SSYSCSPTSPSYSPTSPSYSPASPTYSPTSPYNSGVSPDYSPSSPQYSPSAGYSPSAPGY 68
Query: 335 SPSSTSQYTPQTNDKD 288
SPSSTSQYTPQ ++KD
Sbjct: 69 SPSSTSQYTPQMSNKD 84
[8][TOP]
>UniRef100_Q6ZJR1 DNA-directed RNA polymerase largest chain-like protein n=1
Tax=Oryza sativa Japonica Group RepID=Q6ZJR1_ORYSJ
Length = 138
Score = 126 bits (316), Expect = 1e-27
Identities = 60/85 (70%), Positives = 70/85 (82%), Gaps = 3/85 (3%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY--NSGVSPDYSPSSPQFSPSTGY 357
SPYS TSPNYSPTSP+YSPTSPSYS SP+YSP+SPY + G SPDYSP+SP +SPS Y
Sbjct: 50 SPYSQTSPNYSPTSPTYSPTSPSYSQPSPSYSPTSPYTTSGGPSPDYSPTSPNYSPSGSY 109
Query: 356 SPSQPGYSPSST-SQYTPQTNDKDE 285
SP+ PGYSPSST Q++PQ DKD+
Sbjct: 110 SPTAPGYSPSSTGQQFSPQAADKDK 134
Score = 53.5 bits (127), Expect = 9e-06
Identities = 27/41 (65%), Positives = 34/41 (82%), Gaps = 3/41 (7%)
Frame = -2
Query: 539 SPSSPYSPT---SPNYSPTSPSYSPTSPSYSPSSPTYSPSS 426
SP+SPY+ + SP+YSPTSP+YSP S SYSP++P YSPSS
Sbjct: 81 SPTSPYTTSGGPSPDYSPTSPNYSP-SGSYSPTAPGYSPSS 120
[9][TOP]
>UniRef100_B9FZ51 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9FZ51_ORYSJ
Length = 1526
Score = 126 bits (316), Expect = 1e-27
Identities = 60/85 (70%), Positives = 70/85 (82%), Gaps = 3/85 (3%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY--NSGVSPDYSPSSPQFSPSTGY 357
SPYS TSPNYSPTSP+YSPTSPSYS SP+YSP+SPY + G SPDYSP+SP +SPS Y
Sbjct: 1438 SPYSQTSPNYSPTSPTYSPTSPSYSQPSPSYSPTSPYTTSGGPSPDYSPTSPNYSPSGSY 1497
Query: 356 SPSQPGYSPSST-SQYTPQTNDKDE 285
SP+ PGYSPSST Q++PQ DKD+
Sbjct: 1498 SPTAPGYSPSSTGQQFSPQAADKDK 1522
Score = 115 bits (288), Expect = 2e-24
Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1327 SPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1386
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ PGYSP+S S Y+P
Sbjct: 1387 PAYSPTSPGYSPTSPS-YSP 1405
Score = 112 bits (280), Expect = 2e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1278 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTS 1337
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1338 PSYSPTSPSYSPTSPS-YSP 1356
Score = 112 bits (280), Expect = 2e-23
Identities = 55/80 (68%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1348 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTS 1407
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+PSS ++Y+P
Sbjct: 1408 PNYSPTSPSYNPSS-AKYSP 1426
Score = 110 bits (274), Expect = 8e-23
Identities = 53/79 (67%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
SP YSPTSP+YSP SPSYSPTSPSY+P SPTYSP+SP S SP YSP+SP +SP S
Sbjct: 1230 SPGPGYSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSP 1289
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1290 SYSPTSPSYSPTSPS-YSP 1307
Score = 109 bits (273), Expect = 1e-22
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1313 SPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1372
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1373 PSYSPTSPSYSPTSPA-YSP 1391
Score = 109 bits (272), Expect = 1e-22
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1257 TPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1316
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1317 PVYSPTSPAYSPTSPA-YSP 1335
Score = 109 bits (272), Expect = 1e-22
Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1299 SPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTS 1358
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1359 PSYSPTSPSYSPTSPS-YSP 1377
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP Y+P SP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1250 SPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1309
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1310 PSYSPTSPVYSPTSPA-YSP 1328
Score = 106 bits (265), Expect = 9e-22
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 3/81 (3%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSP+YSPTSP YSP+SP+YSP+SP S SP Y+PSS ++SPS
Sbjct: 1369 SPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYSPSH 1428
Query: 362 GYSPSQPGYSPSS--TSQYTP 306
YSPS P SP S + Y+P
Sbjct: 1429 AYSPSSPRLSPYSQTSPNYSP 1449
Score = 103 bits (257), Expect = 8e-21
Identities = 52/74 (70%), Positives = 62/74 (83%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSP+YSP+SP YSP+SP S SP+YSP+SP ++PS+
Sbjct: 1362 SPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSS 1421
Query: 362 G-YSPSQPGYSPSS 324
YSPS YSPSS
Sbjct: 1422 AKYSPSH-AYSPSS 1434
Score = 102 bits (255), Expect = 1e-20
Identities = 50/79 (63%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
SPSSP P YSPTSPSYSP SPSYSP+SP+Y+P SP S SP YSP+SP +SP S
Sbjct: 1223 SPSSPVYSPGPGYSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSP 1282
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1283 SYSPTSPSYSPTSPS-YSP 1300
Score = 85.5 bits (210), Expect = 2e-15
Identities = 45/79 (56%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Frame = -2
Query: 536 PSSPYSPTSPN-YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
PS Y+P+S YSP+SP YSP P YSP+SP+YSP+SP S SP Y+P SP +SP S
Sbjct: 1210 PSPGYTPSSGGGYSPSSPVYSP-GPGYSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTSP 1268
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1269 SYSPTSPSYSPTSPS-YSP 1286
Score = 53.9 bits (128), Expect = 7e-06
Identities = 36/81 (44%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPT--SPSYSP-SSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SPS SP T +SP ++SP SP Y+PSS YSPSSP +SP
Sbjct: 1178 SPSYLLSPNIRASPITDAQFSPYVGGMAFSPVPSPGYTPSS------GGGYSPSSPVYSP 1231
Query: 368 STGYSPSQPGYSPSSTSQYTP 306
GYSP+ P YSP+S S Y+P
Sbjct: 1232 GPGYSPTSPSYSPASPS-YSP 1251
Score = 53.5 bits (127), Expect = 9e-06
Identities = 27/41 (65%), Positives = 34/41 (82%), Gaps = 3/41 (7%)
Frame = -2
Query: 539 SPSSPYSPT---SPNYSPTSPSYSPTSPSYSPSSPTYSPSS 426
SP+SPY+ + SP+YSPTSP+YSP S SYSP++P YSPSS
Sbjct: 1469 SPTSPYTTSGGPSPDYSPTSPNYSP-SGSYSPTAPGYSPSS 1508
[10][TOP]
>UniRef100_C5YGY9 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5YGY9_SORBI
Length = 1857
Score = 120 bits (301), Expect = 6e-26
Identities = 61/91 (67%), Positives = 71/91 (78%), Gaps = 6/91 (6%)
Frame = -2
Query: 539 SPSSP----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS--GVSPDYSPSSPQ 378
SPSSP YS TSP+YSPTSP+YSPTSPSYS SP+YSP+SP+N+ G SPDYSP+SP
Sbjct: 1767 SPSSPRMTPYSQTSPSYSPTSPTYSPTSPSYSQPSPSYSPTSPFNTSGGPSPDYSPTSPN 1826
Query: 377 FSPSTGYSPSQPGYSPSSTSQYTPQTNDKDE 285
+SPS YSP+ PGYSPSST Q NDKD+
Sbjct: 1827 YSPSGSYSPTAPGYSPSSTG----QGNDKDD 1853
Score = 115 bits (288), Expect = 2e-24
Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1663 SPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1722
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ PGYSP+S S Y+P
Sbjct: 1723 PAYSPTSPGYSPTSPS-YSP 1741
Score = 112 bits (280), Expect = 2e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1614 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTS 1673
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1674 PSYSPTSPSYSPTSPS-YSP 1692
Score = 112 bits (280), Expect = 2e-23
Identities = 55/80 (68%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1684 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTS 1743
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+PSS ++Y+P
Sbjct: 1744 PSYSPTSPSYNPSS-AKYSP 1762
Score = 111 bits (278), Expect = 3e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1607 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTS 1666
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1667 PAYSPTSPSYSPTSPS-YSP 1685
Score = 110 bits (274), Expect = 8e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSPNYSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1586 TPGSPTYSPTSPNYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1645
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1646 PSYSPTSPVYSPTSPA-YSP 1664
Score = 109 bits (273), Expect = 1e-22
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1649 SPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1708
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1709 PSYSPTSPSYSPTSPA-YSP 1727
Score = 109 bits (272), Expect = 1e-22
Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1635 SPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTS 1694
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1695 PSYSPTSPSYSPTSPS-YSP 1713
Score = 107 bits (267), Expect = 5e-22
Identities = 55/86 (63%), Positives = 63/86 (73%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 381
SPSSP YSP SP+YSP SPSYSPTSPSY+P SPTYSP+SP S SP YSP+SP
Sbjct: 1552 SPSSPVFTPEKGYSPLSPSYSPASPSYSPTSPSYTPGSPTYSPTSPNYSPTSPTYSPTSP 1611
Query: 380 QFSP-STGYSPSQPGYSPSSTSQYTP 306
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1612 SYSPTSPSYSPTSPSYSPTSPS-YSP 1636
Score = 105 bits (262), Expect = 2e-21
Identities = 51/81 (62%), Positives = 63/81 (77%), Gaps = 3/81 (3%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSP+YSPTSP YSP+SP+YSP+SP S SP Y+PSS ++SPS
Sbjct: 1705 SPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSH 1764
Query: 362 GYSPSQPGYSPSS--TSQYTP 306
YSPS P +P S + Y+P
Sbjct: 1765 AYSPSSPRMTPYSQTSPSYSP 1785
Score = 104 bits (259), Expect = 5e-21
Identities = 49/74 (66%), Positives = 60/74 (81%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP Y+P SP YSPTSP+YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1579 SPTSPSYTPGSPTYSPTSPNYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1638
Query: 365 TGYSPSQPGYSPSS 324
YSP+ P YSP+S
Sbjct: 1639 PSYSPTSPSYSPTS 1652
Score = 103 bits (256), Expect = 1e-20
Identities = 52/74 (70%), Positives = 61/74 (82%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSP+YSP+SP YSP+SP S SP YSP+SP ++PS+
Sbjct: 1698 SPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSS 1757
Query: 362 G-YSPSQPGYSPSS 324
YSPS YSPSS
Sbjct: 1758 AKYSPSH-AYSPSS 1770
Score = 100 bits (249), Expect = 7e-20
Identities = 56/89 (62%), Positives = 66/89 (74%), Gaps = 9/89 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP +YSP+SP S SP YSP+S
Sbjct: 1670 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS 1729
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTPQT 300
P +SP S YSP+ P YSP+S S Y P +
Sbjct: 1730 PGYSPTSPSYSPTSPSYSPTSPS-YNPSS 1757
Score = 88.2 bits (217), Expect = 3e-16
Identities = 46/80 (57%), Positives = 57/80 (71%), Gaps = 7/80 (8%)
Frame = -2
Query: 524 YSPTSPNYSPTSP------SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
YSP+S YSP+SP YSP SPSYSP+SP+YSP+SP + SP YSP+SP +SP S
Sbjct: 1544 YSPSSGGYSPSSPVFTPEKGYSPLSPSYSPASPSYSPTSPSYTPGSPTYSPTSPNYSPTS 1603
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1604 PTYSPTSPSYSPTSPS-YSP 1622
Score = 58.5 bits (140), Expect = 3e-07
Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSPQ 378
SP + + SP + S P+ YSPSS YSPSSP S +SP YSP+SP
Sbjct: 1518 SPINTDASFSPYVGHMAFSPFPSPGGYSPSSGGYSPSSPVFTPEKGYSPLSPSYSPASPS 1577
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTP 306
+SP S Y+P P YSP+S + Y+P
Sbjct: 1578 YSPTSPSYTPGSPTYSPTSPN-YSP 1601
[11][TOP]
>UniRef100_P35084 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Dictyostelium
discoideum RepID=RPB1_DICDI
Length = 1727
Score = 120 bits (300), Expect = 8e-26
Identities = 61/88 (69%), Positives = 71/88 (80%), Gaps = 5/88 (5%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSPSSP +SPS+
Sbjct: 1638 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSS 1697
Query: 362 -GYSPSQPGYSPSS---TSQYTPQTNDK 291
YSPS P YSPSS T++Y Q N+K
Sbjct: 1698 PSYSPSSPSYSPSSPTFTNKYNYQPNNK 1725
Score = 116 bits (291), Expect = 9e-25
Identities = 58/82 (70%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1631 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSS 1690
Query: 362 -GYSPSQPGYSPSSTSQYTPQT 300
YSPS P YSPSS S Y+P +
Sbjct: 1691 PSYSPSSPSYSPSSPS-YSPSS 1711
Score = 115 bits (289), Expect = 2e-24
Identities = 58/82 (70%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1624 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1683
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSPS P YSPSS S Y+P +
Sbjct: 1684 PSYSPSSPSYSPSSPS-YSPSS 1704
Score = 115 bits (287), Expect = 3e-24
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1561 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTS 1620
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1621 PSYSPTSPSYSPTSPS-YSP 1639
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1596 SPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1655
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1656 PSYSPTSPSYSPTSPS-YSP 1674
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1603 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1662
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1663 PSYSPTSPSYSPTSPS-YSP 1681
Score = 111 bits (278), Expect = 3e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1589 SPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1648
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1649 PSYSPTSPSYSPTSPS-YSP 1667
Score = 110 bits (276), Expect = 5e-23
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1582 SPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1641
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1642 PSYSPTSPSYSPTSPS-YSP 1660
Score = 110 bits (274), Expect = 8e-23
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1548 PQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSP 1607
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1608 SYSPTSPSYSPTSPS-YSP 1625
Score = 103 bits (256), Expect = 1e-20
Identities = 51/77 (66%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S Y P SP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1543 SYQYFPQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFY 1602
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 1603 SPTSPSYSPTSPS-YSP 1618
Score = 90.5 bits (223), Expect = 7e-17
Identities = 49/88 (55%), Positives = 60/88 (68%), Gaps = 10/88 (11%)
Frame = -2
Query: 539 SPSSPYSP---------TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 387
SPS+ SP +S Y P SP+YSPTSPSYSP+SP+YSP+SP S SP YSP+
Sbjct: 1525 SPSAMNSPGYNANKSYGSSYQYFPQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1584
Query: 386 SPQFSP-STGYSPSQPGYSPSSTSQYTP 306
SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1585 SPSYSPTSPSYSPTSPFYSPTSPS-YSP 1611
[12][TOP]
>UniRef100_B0XAQ9 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
RepID=B0XAQ9_CULQU
Length = 1874
Score = 117 bits (293), Expect = 5e-25
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
SP+SPYSPTSP+YSPTSP+YSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P+T
Sbjct: 1649 SPTSPYSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPATP 1708
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSPSS Y+P
Sbjct: 1709 SYSPTSPNYSPSS-PHYSP 1726
Score = 109 bits (272), Expect = 1e-22
Identities = 54/82 (65%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSP+SPSYSP+SP+YSP+SP S SP+Y+P++P +SP S
Sbjct: 1655 SPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSPTS 1714
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSPS P YSP+S S Y+P +
Sbjct: 1715 PNYSPSSPHYSPTSPS-YSPSS 1735
Score = 109 bits (272), Expect = 1e-22
Identities = 53/80 (66%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSP+SPSYSPTSPSYSP+SP+YSP+SP + +P YSP+SP +SPS+
Sbjct: 1662 SPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPNYSPSS 1721
Query: 362 -GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSPSS +Y+P
Sbjct: 1722 PHYSPTSPSYSPSS-PKYSP 1740
Score = 108 bits (271), Expect = 2e-22
Identities = 55/96 (57%), Positives = 65/96 (67%), Gaps = 18/96 (18%)
Frame = -2
Query: 539 SPSSP-------------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPD 399
SPSSP YSPTSP+YSPTSP+YSPTSP YSP+SP YSP+SP S SP
Sbjct: 1561 SPSSPNYAAASPGGASPGYSPTSPSYSPTSPNYSPTSPRYSPTSPNYSPTSPNYSPTSPS 1620
Query: 398 YSPSSPQFSPSTGYSPSQPGYSPSS-----TSQYTP 306
YSP+SP +SP+ Y+PS P YSP+S TS Y+P
Sbjct: 1621 YSPTSPLYSPTATYAPSSPAYSPTSPSYSPTSPYSP 1656
Score = 107 bits (268), Expect = 4e-22
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP+Y+P +PSYSP+SP YSPSSP+ S SP YSPSSP++SP S
Sbjct: 1683 SPTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPTS 1742
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y S QYTP
Sbjct: 1743 PSYSPTSPSYGGS--PQYTP 1760
Score = 106 bits (265), Expect = 9e-22
Identities = 55/87 (63%), Positives = 64/87 (73%), Gaps = 7/87 (8%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP------TYSPSSPYNSGVSPDYSPSSP 381
SP+SP YSPTSPNYSPTSP+YSPTSPSYSP+SP TY+PSSP S SP YSP+SP
Sbjct: 1594 SPTSPRYSPTSPNYSPTSPNYSPTSPSYSPTSPLYSPTATYAPSSPAYSPTSPSYSPTSP 1653
Query: 380 QFSPSTGYSPSQPGYSPSSTSQYTPQT 300
S YSP+ P YSP+S S Y+P +
Sbjct: 1654 YSPTSPSYSPTSPAYSPTSPS-YSPSS 1679
Score = 105 bits (263), Expect = 2e-21
Identities = 54/82 (65%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSP+YSP+SP+YSPSSP S SP YSP+SP +SP S
Sbjct: 1642 SPTSPSYSPTSP-YSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTS 1700
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
Y+P+ P YSP+S + Y+P +
Sbjct: 1701 PNYTPATPSYSPTSPN-YSPSS 1721
Score = 104 bits (260), Expect = 3e-21
Identities = 55/86 (63%), Positives = 66/86 (76%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS------GVSPDYSPSSP 381
+P++P YSPTSPNYSP+SP YSPTSPSYSPSSP YSP+SP S G SP Y+P+SP
Sbjct: 1704 TPATPSYSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPTSPSYSPTSPSYGGSPQYTPASP 1763
Query: 380 QFSP-STGYSPSQPGYSPSSTSQYTP 306
Q+SP S YSP+ P YSPSS Q++P
Sbjct: 1764 QYSPTSPKYSPTSPSYSPSS-PQHSP 1788
Score = 103 bits (257), Expect = 8e-21
Identities = 58/86 (67%), Positives = 64/86 (74%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSP------SSPTYSPSSPYNSGVSPDYSPSSP 381
SP+SP YSPTSPNYSPTSPSYSPTSP YSP SSP YSP+SP S SP YSP+SP
Sbjct: 1601 SPTSPNYSPTSPNYSPTSPSYSPTSPLYSPTATYAPSSPAYSPTSPSYSPTSP-YSPTSP 1659
Query: 380 QFSP-STGYSPSQPGYSPSSTSQYTP 306
+SP S YSP+ P YSPSS S Y+P
Sbjct: 1660 SYSPTSPAYSPTSPSYSPSSPS-YSP 1684
Score = 103 bits (257), Expect = 8e-21
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+PSSP YSPTSP+YSPTSP YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1635 APSSPAYSPTSPSYSPTSP-YSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTS 1693
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P +T Y+P
Sbjct: 1694 PSYSPTSPNYTP-ATPSYSP 1712
Score = 102 bits (254), Expect = 2e-20
Identities = 52/86 (60%), Positives = 64/86 (74%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
SP+SP YSPTSPNY+P +PSYSPTSP+YSPSSP YSP+SP S SP YSP+SP +SP
Sbjct: 1690 SPTSPSYSPTSPNYTPATPSYSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPTSPSYSPTS 1749
Query: 368 -----STGYSPSQPGYSPSSTSQYTP 306
S Y+P+ P YSP+S +Y+P
Sbjct: 1750 PSYGGSPQYTPASPQYSPTS-PKYSP 1774
Score = 97.8 bits (242), Expect = 4e-19
Identities = 49/75 (65%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP+YSP+SP YSPTSPSYSP+SP+Y SP + SP YSP+SP++SP S
Sbjct: 1718 SPSSPHYSPTSPSYSPSSPKYSPTSPSYSPTSPSYG-GSPQYTPASPQYSPTSPKYSPTS 1776
Query: 365 TGYSPSQPGYSPSST 321
YSPS P +SP S+
Sbjct: 1777 PSYSPSSPQHSPGSS 1791
Score = 95.1 bits (235), Expect = 3e-18
Identities = 51/88 (57%), Positives = 63/88 (71%), Gaps = 10/88 (11%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSY------SPSSPTYSPSSPYNSGVSPDYSPSSP 381
SP+SP YSP+SP YSPTSPSYSPTSPSY +P+SP YSP+SP S SP YSPSSP
Sbjct: 1725 SPTSPSYSPSSPKYSPTSPSYSPTSPSYGGSPQYTPASPQYSPTSPKYSPTSPSYSPSSP 1784
Query: 380 QFSP---STGYSPSQPGYSPSSTSQYTP 306
Q SP + + + P YSP +T++Y+P
Sbjct: 1785 QHSPGSSGSNFMVNSPTYSP-TTARYSP 1811
Score = 86.7 bits (213), Expect = 1e-15
Identities = 47/92 (51%), Positives = 61/92 (66%), Gaps = 12/92 (13%)
Frame = -2
Query: 539 SPSSPYSPT-SPNYSPTSPSYSPTSPS-----YSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SP P SP+ SP+YSP+SP+Y+ SP YSP+SP+YSP+SP S SP YSP+SP
Sbjct: 1547 SPYFPSSPSASPSYSPSSPNYAAASPGGASPGYSPTSPSYSPTSPNYSPTSPRYSPTSPN 1606
Query: 377 FSP-STGYSPSQPGYSPSS-----TSQYTPQT 300
+SP S YSP+ P YSP+S T+ Y P +
Sbjct: 1607 YSPTSPNYSPTSPSYSPTSPLYSPTATYAPSS 1638
Score = 86.3 bits (212), Expect = 1e-15
Identities = 53/116 (45%), Positives = 70/116 (60%), Gaps = 27/116 (23%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSP---------SSPTYSPS--------SPYNS 414
+P+SP YSPTSP YSPTSPSYSP+SP +SP +SPTYSP+ S Y+
Sbjct: 1759 TPASPQYSPTSPKYSPTSPSYSPSSPQHSPGSSGSNFMVNSPTYSPTTARYSPNMSSYSP 1818
Query: 413 G------VSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQ--YTPQTNDKDERGKD 273
G SP Y+P+SP +SPS+ YSP+ GYSPSS + Y+P + ++ D
Sbjct: 1819 GSQKYSPTSPVYTPTSPHYSPSSPAYSPTGQGYSPSSPASPTYSPTSPSYEDSVDD 1874
Score = 64.3 bits (155), Expect = 5e-09
Identities = 40/95 (42%), Positives = 52/95 (54%), Gaps = 17/95 (17%)
Frame = -2
Query: 539 SPSSPYS---PTSPNYSPT--------SPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYS 393
SPS P S P P++SP+ SPS+SP S S P+ SP P + SP YS
Sbjct: 1502 SPSGPPSGMTPGGPSFSPSAQSDASGMSPSWSPMPGSPSSPGPSMSPYFPSSPSASPSYS 1561
Query: 392 PSSPQFS------PSTGYSPSQPGYSPSSTSQYTP 306
PSSP ++ S GYSP+ P YSP+S + Y+P
Sbjct: 1562 PSSPNYAAASPGGASPGYSPTSPSYSPTSPN-YSP 1595
[13][TOP]
>UniRef100_O96446 DNA-directed RNA polymerase n=1 Tax=Vairimorpha necatrix
RepID=O96446_9MICR
Length = 1605
Score = 117 bits (292), Expect = 7e-25
Identities = 60/88 (68%), Positives = 71/88 (80%), Gaps = 2/88 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1510 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1569
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDKDER 282
YSP+ P YSP+S S Y+P T D DE+
Sbjct: 1570 PSYSPTSPSYSPTSPS-YSP-TYDNDEK 1595
Score = 112 bits (281), Expect = 1e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1496 SPTSPTYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1555
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1556 PSYSPTSPSYSPTSPS-YSP 1574
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SPTYSP+SP S SP YSP+SP +SP S
Sbjct: 1468 SPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYSPTSPSYSPTS 1527
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1528 PSYSPTSPSYSPTSPS-YSP 1546
Score = 111 bits (278), Expect = 3e-23
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1489 SPTSPTYSPTSPTYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1548
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1549 PSYSPTSPSYSPTSPS-YSP 1567
Score = 108 bits (269), Expect = 3e-22
Identities = 52/77 (67%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
+S YSPTSP YSPTSP+YSPTSP+YSP+SPTYSP+SP S SP YSP+SP +SP S Y
Sbjct: 1464 TSLYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYSPTSPSY 1523
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 1524 SPTSPSYSPTSPS-YSP 1539
Score = 98.2 bits (243), Expect = 3e-19
Identities = 47/74 (63%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 348
Y+P + YSPTSP+YSPTSP+YSP+SPTYSP+SP S SP YSP+SP +SP S YSP+
Sbjct: 1460 YAPKTSLYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYSPT 1519
Query: 347 QPGYSPSSTSQYTP 306
P YSP+S S Y+P
Sbjct: 1520 SPSYSPTSPS-YSP 1532
Score = 85.1 bits (209), Expect = 3e-15
Identities = 43/77 (55%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S Y Y+P + YSPTSP+YSP+SPTYSP+SP S SP YSP+SP +SP S Y
Sbjct: 1450 SPAYLVEGNRYAPKTSLYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTY 1509
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 1510 SPTSPSYSPTSPS-YSP 1525
Score = 55.5 bits (132), Expect = 2e-06
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 348
+SP S N S +S ++SP +Y Y+P + S SP YSP+SP +SP S YSP+
Sbjct: 1435 HSPVSENLSISSGNWSP---AYLVEGNRYAPKTSLYSPTSPTYSPTSPTYSPTSPTYSPT 1491
Query: 347 QPGYSPSSTSQYTP 306
P YSP+S + Y+P
Sbjct: 1492 SPTYSPTSPT-YSP 1504
[14][TOP]
>UniRef100_C5DXL0 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DXL0_ZYGRC
Length = 1744
Score = 116 bits (291), Expect = 9e-25
Identities = 58/97 (59%), Positives = 73/97 (75%), Gaps = 8/97 (8%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1644 SPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1703
Query: 365 TGYSPSQPGYSPSS------TSQYTPQTNDKDERGKD 273
YSP+ P YSP+S + Y+P + +D+R KD
Sbjct: 1704 PSYSPTSPSYSPTSPNYSPGSPTYSPSSPKQDDREKD 1740
Score = 115 bits (288), Expect = 2e-24
Identities = 58/89 (65%), Positives = 69/89 (77%), Gaps = 2/89 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1658 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1717
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDKDERG 279
YSP P YSPSS P+ +D+++ G
Sbjct: 1718 PNYSPGSPTYSPSS-----PKQDDREKDG 1741
Score = 113 bits (283), Expect = 8e-24
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSP+SP +SP S
Sbjct: 1623 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTS 1682
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1683 PSYSPTSPSYSPTSPS-YSP 1701
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1581 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1640
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1641 PSYSPTSPSYSPTSPS-YSP 1659
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPNYSPTSPS-YSP 1680
Score = 112 bits (281), Expect = 1e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP SPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1553 SPTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1612
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1613 PSYSPTSPSYSPTSPS-YSP 1631
Score = 112 bits (280), Expect = 2e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1560 SPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1619
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1620 PSYSPTSPSYSPTSPS-YSP 1638
Score = 110 bits (276), Expect = 5e-23
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP+YSPTSPSYSP SP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1539 SPSSPTYSPTSPSYSPTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1598
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1599 PSYSPTSPSYSPTSPS-YSP 1617
Score = 105 bits (262), Expect = 2e-21
Identities = 53/78 (67%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
Frame = -2
Query: 533 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 360
SSP +SP+SP YSPTSPSYSPTSPSYSP SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1534 SSPGFSPSSPTYSPTSPSYSPTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1593
Query: 359 YSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1594 YSPTSPSYSPTSPS-YSP 1610
[15][TOP]
>UniRef100_UPI00019270E9 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 2 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270E9
Length = 2014
Score = 116 bits (290), Expect = 1e-24
Identities = 59/80 (73%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSPSSPQ+SP S
Sbjct: 1700 SPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTS 1759
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP P YSPSS S Y+P
Sbjct: 1760 PAYSPQSPSYSPSSPS-YSP 1778
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1623 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1682
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1683 PSYSPTSPSYSPTSPS-YSP 1701
Score = 112 bits (281), Expect = 1e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 SPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1669 PSYSPTSPSYSPTSPS-YSP 1687
Score = 112 bits (281), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1665 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTS 1724
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1725 PSYSPTSPKYSPTSPS-YSP 1743
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP++
Sbjct: 1644 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1703
Query: 362 G-YSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1704 PIYSPTSPSYSPTSPS-YSP 1722
Score = 112 bits (279), Expect = 2e-23
Identities = 56/82 (68%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1686 SPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTS 1745
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSPS P YSP+S + Y+PQ+
Sbjct: 1746 PSYSPSSPQYSPTSPA-YSPQS 1766
Score = 111 bits (278), Expect = 3e-23
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 SPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 111 bits (278), Expect = 3e-23
Identities = 56/82 (68%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1693 SPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSS 1752
Query: 362 -GYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSP S S Y+P +
Sbjct: 1753 PQYSPTSPAYSPQSPS-YSPSS 1773
Score = 111 bits (278), Expect = 3e-23
Identities = 56/80 (70%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP YSPTSPSYSPSSP+YSPSSP S SP YSP+SP +SP S
Sbjct: 1777 SPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTS 1836
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1837 PAYSPTSPAYSPTSPA-YSP 1855
Score = 111 bits (277), Expect = 4e-23
Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1595 SPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1654
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1655 PSYSPTSPSYSPTSPS-YSP 1673
Score = 110 bits (276), Expect = 5e-23
Identities = 57/80 (71%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSPSSP YSP+SP S SP YSPSSP +SP S
Sbjct: 1721 SPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTS 1780
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1781 PKYSPTSPKYSPTS-PKYSP 1799
Score = 110 bits (274), Expect = 8e-23
Identities = 56/80 (70%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP YSPTSP YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1588 SPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTS 1647
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1648 PSYSPTSPSYSPTSPS-YSP 1666
Score = 110 bits (274), Expect = 8e-23
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP YSPTSP+YSP SPSYSPSSP+YSP+SP S SP YSP+SP++SP S
Sbjct: 1742 SPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTS 1801
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS P YSPSS + Y+P
Sbjct: 1802 PSYSPSSPSYSPSSPN-YSP 1820
Score = 109 bits (272), Expect = 1e-22
Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP YSPTSP YSPTSP YSP+SP+YSPSSP S SP+YSP+SP +SP S
Sbjct: 1770 SPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTS 1829
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1830 PTYSPTSPAYSPTSPA-YSP 1848
Score = 108 bits (270), Expect = 2e-22
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSP+SPNYSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1805 SPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTS 1864
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1865 PAYSPTSPKYSPTS-PKYSP 1883
Score = 107 bits (267), Expect = 5e-22
Identities = 58/107 (54%), Positives = 68/107 (63%), Gaps = 29/107 (27%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP++SP
Sbjct: 1819 SPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSPKYSPTS 1878
Query: 368 --------------------STGYSPSQPGYSPSS------TSQYTP 306
STGYSP+ P YSPSS T QY+P
Sbjct: 1879 PKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSP 1925
Score = 107 bits (266), Expect = 7e-22
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSP SP+YSP+SPSYSPTSP YSP+SP YSP+SP S SP YSPSSP +SPS+
Sbjct: 1756 SPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSS 1815
Query: 362 -GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1816 PNYSPTSPTYSPTSPT-YSP 1834
Score = 105 bits (263), Expect = 2e-21
Identities = 52/80 (65%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP+YSP+SP+YSPTSP+YSP+SPTYSP+SP S SP YSP+SP +SP S
Sbjct: 1798 SPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTS 1857
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1858 PVYSPTSPAYSPTS-PKYSP 1876
Score = 102 bits (254), Expect = 2e-20
Identities = 51/80 (63%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP SP+SP YSPTSP YSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1581 NPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTS 1640
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1641 PSYSPTSPSYSPTSPS-YSP 1659
Score = 102 bits (254), Expect = 2e-20
Identities = 57/100 (57%), Positives = 64/100 (64%), Gaps = 13/100 (13%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP YSPTS YSPTSP YSPSSP YSP++P S SP YSP+SP +SPST
Sbjct: 1882 SPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPST 1941
Query: 362 ---------GYSPSQPGYSPSSTSQYTPQ---TNDKDERG 279
YSP +P YSP T Y+P T D RG
Sbjct: 1942 PTDKSVGSINYSPLEPDYSP-GTPTYSPDGTPTYSPDGRG 1980
Score = 101 bits (252), Expect = 3e-20
Identities = 56/87 (64%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTS-------PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTS P+YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+S
Sbjct: 1672 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTS 1731
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P++SP S YSP+ P YSPSS QY+P
Sbjct: 1732 PKYSPTSPSYSPTSPSYSPSS-PQYSP 1757
Score = 100 bits (250), Expect = 5e-20
Identities = 50/74 (67%), Positives = 59/74 (79%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP YSPTSP+YSP+S YSP+SP S SP YSP++PQ+SP S
Sbjct: 1868 SPTSPKYSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTS 1927
Query: 365 TGYSPSQPGYSPSS 324
YSP+ P YSPS+
Sbjct: 1928 PKYSPASPTYSPST 1941
Score = 97.1 bits (240), Expect = 7e-19
Identities = 49/80 (61%), Positives = 60/80 (75%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP ++P SP SP+SP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1574 SPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTS 1633
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1634 PSYSPTSPSYSPTSPS-YSP 1652
Score = 91.7 bits (226), Expect = 3e-17
Identities = 44/74 (59%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 348
YSP SP ++P SP+ SP+SP YSP+SP YSP+SP S SP YSP+SP +SP S YSP+
Sbjct: 1573 YSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPT 1632
Query: 347 QPGYSPSSTSQYTP 306
P YSP+S S Y+P
Sbjct: 1633 SPSYSPTSPS-YSP 1645
Score = 91.7 bits (226), Expect = 3e-17
Identities = 46/89 (51%), Positives = 59/89 (66%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVS--------PDYSPS 387
SP+SP YSP+SP YSPT+P YSPTSP YSP+SPTYSPS+P + V PDYSP
Sbjct: 1903 SPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPSTPTDKSVGSINYSPLEPDYSPG 1962
Query: 386 SPQFSP--STGYSPSQPGYSPSSTSQYTP 306
+P +SP + YSP G+S ++ +P
Sbjct: 1963 TPTYSPDGTPTYSPDGRGFSGTAAKNISP 1991
Score = 90.9 bits (224), Expect = 5e-17
Identities = 46/85 (54%), Positives = 60/85 (70%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPYSP------TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SP+ +SP + P+YSP SP+++P SP+ SPSSP YSP+SP S SP YSP+SP
Sbjct: 1555 SPAGGFSPAWSPQDSIPSYSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPS 1614
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTP 306
+SP S GYSP+ P YSP+S S Y+P
Sbjct: 1615 YSPTSPGYSPTSPSYSPTSPS-YSP 1638
[16][TOP]
>UniRef100_UPI00019270BB PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 1 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270BB
Length = 2041
Score = 116 bits (290), Expect = 1e-24
Identities = 59/80 (73%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSPSSPQ+SP S
Sbjct: 1727 SPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTS 1786
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP P YSPSS S Y+P
Sbjct: 1787 PAYSPQSPSYSPSSPS-YSP 1805
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1650 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1709
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1710 PSYSPTSPSYSPTSPS-YSP 1728
Score = 112 bits (281), Expect = 1e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1636 SPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1695
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1696 PSYSPTSPSYSPTSPS-YSP 1714
Score = 112 bits (281), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1692 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTS 1751
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1752 PSYSPTSPKYSPTSPS-YSP 1770
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP++
Sbjct: 1671 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1730
Query: 362 G-YSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1731 PIYSPTSPSYSPTSPS-YSP 1749
Score = 112 bits (279), Expect = 2e-23
Identities = 56/82 (68%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1713 SPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTS 1772
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSPS P YSP+S + Y+PQ+
Sbjct: 1773 PSYSPSSPQYSPTSPA-YSPQS 1793
Score = 111 bits (278), Expect = 3e-23
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1629 SPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1688
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1689 PSYSPTSPSYSPTSPS-YSP 1707
Score = 111 bits (278), Expect = 3e-23
Identities = 56/82 (68%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1720 SPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSS 1779
Query: 362 -GYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSP S S Y+P +
Sbjct: 1780 PQYSPTSPAYSPQSPS-YSPSS 1800
Score = 111 bits (278), Expect = 3e-23
Identities = 56/80 (70%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP YSPTSPSYSPSSP+YSPSSP S SP YSP+SP +SP S
Sbjct: 1804 SPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTS 1863
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1864 PAYSPTSPAYSPTSPA-YSP 1882
Score = 111 bits (277), Expect = 4e-23
Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1622 SPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1681
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1682 PSYSPTSPSYSPTSPS-YSP 1700
Score = 110 bits (276), Expect = 5e-23
Identities = 57/80 (71%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSPSSP YSP+SP S SP YSPSSP +SP S
Sbjct: 1748 SPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTS 1807
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1808 PKYSPTSPKYSPTS-PKYSP 1826
Score = 110 bits (274), Expect = 8e-23
Identities = 56/80 (70%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP YSPTSP YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1615 SPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTS 1674
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1675 PSYSPTSPSYSPTSPS-YSP 1693
Score = 110 bits (274), Expect = 8e-23
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP YSPTSP+YSP SPSYSPSSP+YSP+SP S SP YSP+SP++SP S
Sbjct: 1769 SPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTS 1828
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS P YSPSS + Y+P
Sbjct: 1829 PSYSPSSPSYSPSSPN-YSP 1847
Score = 109 bits (272), Expect = 1e-22
Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP YSPTSP YSPTSP YSP+SP+YSPSSP S SP+YSP+SP +SP S
Sbjct: 1797 SPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTS 1856
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1857 PTYSPTSPAYSPTSPA-YSP 1875
Score = 108 bits (270), Expect = 2e-22
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSP+SPNYSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1832 SPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTS 1891
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1892 PAYSPTSPKYSPTS-PKYSP 1910
Score = 107 bits (267), Expect = 5e-22
Identities = 58/107 (54%), Positives = 68/107 (63%), Gaps = 29/107 (27%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP++SP
Sbjct: 1846 SPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSPKYSPTS 1905
Query: 368 --------------------STGYSPSQPGYSPSS------TSQYTP 306
STGYSP+ P YSPSS T QY+P
Sbjct: 1906 PKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSP 1952
Score = 107 bits (266), Expect = 7e-22
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSP SP+YSP+SPSYSPTSP YSP+SP YSP+SP S SP YSPSSP +SPS+
Sbjct: 1783 SPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSS 1842
Query: 362 -GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1843 PNYSPTSPTYSPTSPT-YSP 1861
Score = 105 bits (263), Expect = 2e-21
Identities = 52/80 (65%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP+YSP+SP+YSPTSP+YSP+SPTYSP+SP S SP YSP+SP +SP S
Sbjct: 1825 SPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTS 1884
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1885 PVYSPTSPAYSPTS-PKYSP 1903
Score = 102 bits (254), Expect = 2e-20
Identities = 51/80 (63%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP SP+SP YSPTSP YSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1608 NPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTS 1667
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1668 PSYSPTSPSYSPTSPS-YSP 1686
Score = 102 bits (254), Expect = 2e-20
Identities = 57/100 (57%), Positives = 64/100 (64%), Gaps = 13/100 (13%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP YSPTS YSPTSP YSPSSP YSP++P S SP YSP+SP +SPST
Sbjct: 1909 SPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPST 1968
Query: 362 ---------GYSPSQPGYSPSSTSQYTPQ---TNDKDERG 279
YSP +P YSP T Y+P T D RG
Sbjct: 1969 PTDKSVGSINYSPLEPDYSP-GTPTYSPDGTPTYSPDGRG 2007
Score = 101 bits (252), Expect = 3e-20
Identities = 56/87 (64%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTS-------PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTS P+YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+S
Sbjct: 1699 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTS 1758
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P++SP S YSP+ P YSPSS QY+P
Sbjct: 1759 PKYSPTSPSYSPTSPSYSPSS-PQYSP 1784
Score = 100 bits (250), Expect = 5e-20
Identities = 50/74 (67%), Positives = 59/74 (79%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP YSPTSP+YSP+S YSP+SP S SP YSP++PQ+SP S
Sbjct: 1895 SPTSPKYSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTS 1954
Query: 365 TGYSPSQPGYSPSS 324
YSP+ P YSPS+
Sbjct: 1955 PKYSPASPTYSPST 1968
Score = 97.1 bits (240), Expect = 7e-19
Identities = 49/80 (61%), Positives = 60/80 (75%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP ++P SP SP+SP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1601 SPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTS 1660
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1661 PSYSPTSPSYSPTSPS-YSP 1679
Score = 94.4 bits (233), Expect = 5e-18
Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 7/83 (8%)
Frame = -2
Query: 533 SSPYSPT------SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 372
SSPY P+ SP+YSP SP+++P SP+ SPSSP YSP+SP S SP YSP+SP +S
Sbjct: 1584 SSPYIPSPSRNVMSPSYSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYS 1643
Query: 371 P-STGYSPSQPGYSPSSTSQYTP 306
P S GYSP+ P YSP+S S Y+P
Sbjct: 1644 PTSPGYSPTSPSYSPTSPS-YSP 1665
Score = 92.4 bits (228), Expect = 2e-17
Identities = 45/77 (58%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YSP SP ++P SP+ SP+SP YSP+SP YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1597 SPSYSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSY 1656
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 1657 SPTSPSYSPTSPS-YSP 1672
Score = 91.7 bits (226), Expect = 3e-17
Identities = 46/89 (51%), Positives = 59/89 (66%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVS--------PDYSPS 387
SP+SP YSP+SP YSPT+P YSPTSP YSP+SPTYSPS+P + V PDYSP
Sbjct: 1930 SPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPSTPTDKSVGSINYSPLEPDYSPG 1989
Query: 386 SPQFSP--STGYSPSQPGYSPSSTSQYTP 306
+P +SP + YSP G+S ++ +P
Sbjct: 1990 TPTYSPDGTPTYSPDGRGFSGTAAKNISP 2018
Score = 56.2 bits (134), Expect = 1e-06
Identities = 37/80 (46%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSP--TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 366
SP S SP+ SP SPS + SPSYSP+SP ++P SP SPSSP
Sbjct: 1572 SPQDSMSLGSPDSSPYIPSPSRNVMSPSYSPNSPAFNPQSPA-------MSPSSP----- 1619
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
GYSP+ P YSP+S Y+P
Sbjct: 1620 -GYSPTSPLYSPTSPG-YSP 1637
[17][TOP]
>UniRef100_UPI000051AA8E PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) n=1 Tax=Apis mellifera
RepID=UPI000051AA8E
Length = 452
Score = 116 bits (290), Expect = 1e-24
Identities = 59/80 (73%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSPSSP Y+P+SP S SP YSPSSPQ+SP S
Sbjct: 252 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPSSPQYSPAS 311
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS P YSP+S S Y+P
Sbjct: 312 PSYSPSSPKYSPTSPS-YSP 330
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 154 SPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 213
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 214 PSYSPTSPSYSPTSPS-YSP 232
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 175 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 234
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 235 PSYSPTSPSYSPTSPS-YSP 253
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 196 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 255
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 256 PSYSPTSPSYSPTSPS-YSP 274
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 217 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 276
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS P Y+P+S S Y+P
Sbjct: 277 PSYSPSSPNYTPASPS-YSP 295
Score = 113 bits (282), Expect = 1e-23
Identities = 55/82 (67%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 224 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSS 283
Query: 362 -GYSPSQPGYSPSSTSQYTPQT 300
Y+P+ P YSP+S S Y+P +
Sbjct: 284 PNYTPASPSYSPTSPS-YSPSS 304
Score = 111 bits (278), Expect = 3e-23
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+PSSP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 147 TPSSPNYSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 206
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 207 PSYSPTSPSYSPTSPS-YSP 225
Score = 106 bits (265), Expect = 9e-22
Identities = 56/89 (62%), Positives = 66/89 (74%), Gaps = 9/89 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF--SP 369
SPSSP YSPTSP+YSPTSPS++ TSP Y+P+SPTYSP+SP S SP YSPSSPQ S
Sbjct: 315 SPSSPKYSPTSPSYSPTSPSFAGTSPQYTPASPTYSPTSPTYSPTSPSYSPSSPQHTASG 374
Query: 368 STGYSPSQPGYSPSS------TSQYTPQT 300
ST YSPS P YSP+S + QY+P +
Sbjct: 375 STRYSPSSPNYSPTSPTYSPTSPQYSPSS 403
Score = 105 bits (262), Expect = 2e-21
Identities = 51/79 (64%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
P+SP +P+SPNYSPTSP+YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 141 PTSPSITPSSPNYSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 200
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 201 SYSPTSPSYSPTSPS-YSP 218
Score = 103 bits (256), Expect = 1e-20
Identities = 53/87 (60%), Positives = 64/87 (73%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
SP+SP YSP+SPNY+P SPSYSPTSPSYSPSSP YSP+SP S SP YSP+SP +SP
Sbjct: 273 SPTSPSYSPSSPNYTPASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTS 332
Query: 368 ------STGYSPSQPGYSPSSTSQYTP 306
S Y+P+ P YSP+S + Y+P
Sbjct: 333 PSFAGTSPQYTPASPTYSPTSPT-YSP 358
Score = 103 bits (256), Expect = 1e-20
Identities = 52/87 (59%), Positives = 61/87 (70%), Gaps = 10/87 (11%)
Frame = -2
Query: 539 SPSSP---------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 387
SPSSP YSP+SPNYSPTSP+YSPTSP YSPSS YSP+SP + SP YSP+
Sbjct: 364 SPSSPQHTASGSTRYSPSSPNYSPTSPTYSPTSPQYSPSSTKYSPTSPTYTPTSPSYSPT 423
Query: 386 SPQFSPST-GYSPSQPGYSPSSTSQYT 309
SP +SP GYSP+ P YSP+S + T
Sbjct: 424 SPTYSPPVPGYSPTSPTYSPASPAYET 450
Score = 102 bits (253), Expect = 2e-20
Identities = 56/87 (64%), Positives = 67/87 (77%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP +YSPSSP + SP YSP+S
Sbjct: 238 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTS 297
Query: 383 PQFSPST-GYSPSQPGYSPSSTSQYTP 306
P +SPS+ YSP+ P YSPSS +Y+P
Sbjct: 298 PSYSPSSPQYSPASPSYSPSS-PKYSP 323
Score = 100 bits (250), Expect = 5e-20
Identities = 49/77 (63%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YSPTSP Y PTSPS +P+SP+YSP+SPTYSP+SP S SP YSP+SP +SP S Y
Sbjct: 129 SPSYSPTSPAYLPTSPSITPSSPNYSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSY 188
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 189 SPTSPSYSPTSPS-YSP 204
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/78 (61%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 360
P SP SP+YSPTSP+Y PTSPS +PSSP YSP+SP S SP+YSP+SP +SP S
Sbjct: 121 PMSPAGGASPSYSPTSPAYLPTSPSITPSSPNYSPTSPTYSPTSPNYSPTSPSYSPTSPS 180
Query: 359 YSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 181 YSPTSPSYSPTSPS-YSP 197
Score = 97.4 bits (241), Expect = 6e-19
Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 10/88 (11%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPS--------YSPSSPTYSPSSPYNSGVSPDYSPS 387
+P+SP YSPTSP YSPTSPSYSP+SP YSPSSP YSP+SP S SP YSPS
Sbjct: 343 TPASPTYSPTSPTYSPTSPSYSPSSPQHTASGSTRYSPSSPNYSPTSPTYSPTSPQYSPS 402
Query: 386 SPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S ++SP S Y+P+ P YSP+S + Y+P
Sbjct: 403 STKYSPTSPTYTPTSPSYSPTSPT-YSP 429
Score = 94.4 bits (233), Expect = 5e-18
Identities = 50/93 (53%), Positives = 65/93 (69%), Gaps = 13/93 (13%)
Frame = -2
Query: 539 SPS-SPYSPTS----PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 375
SPS SP SP+ P YSP SPSYSP+SP YSP+SP+YSP+SP +G SP Y+P+SP +
Sbjct: 290 SPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGTSPQYTPASPTY 349
Query: 374 SP-STGYSPSQPGYSPSS-------TSQYTPQT 300
SP S YSP+ P YSPSS +++Y+P +
Sbjct: 350 SPTSPTYSPTSPSYSPSSPQHTASGSTRYSPSS 382
[18][TOP]
>UniRef100_UPI0000F2BF13 PREDICTED: similar to RNA polymerase II isoform 2 n=1 Tax=Monodelphis
domestica RepID=UPI0000F2BF13
Length = 1932
Score = 115 bits (289), Expect = 2e-24
Identities = 56/82 (68%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1697 SPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTS 1756
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSPSS +YTPQ+
Sbjct: 1757 PSYSPTSPSYSPSS-PRYTPQS 1777
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1585 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1644
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1645 PSYSPTSPSYSPTSPS-YSP 1663
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1606 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1665
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1666 PSYSPTSPSYSPTSPS-YSP 1684
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1627 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1686
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1687 PSYSPTSPSYSPTSPS-YSP 1705
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1648 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1707
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S S Y+P
Sbjct: 1708 PNYSPTSPNYTPTSPS-YSP 1726
Score = 112 bits (279), Expect = 2e-23
Identities = 56/86 (65%), Positives = 68/86 (79%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 1732 SPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSS 1791
Query: 362 -GYSPSQPGYSPSSTS------QYTP 306
YSP+ P Y+P+S S +YTP
Sbjct: 1792 PSYSPTSPKYTPTSPSYSPSSPEYTP 1817
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1571 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1630
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1631 PSYSPTSPSYSPTSPS-YSP 1649
Score = 110 bits (274), Expect = 8e-23
Identities = 53/80 (66%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1669 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTS 1728
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S + Y+P
Sbjct: 1729 PSYSPTSPNYTPTSPN-YSP 1747
Score = 107 bits (268), Expect = 4e-22
Identities = 54/87 (62%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1711 SPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS 1770
Query: 362 --------GYSPSQPGYSPSSTSQYTP 306
Y+PS P YSPSS S Y+P
Sbjct: 1771 PRYTPQSPTYTPSSPSYSPSSPS-YSP 1796
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1564 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1623
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1624 PSYSPTSPSYSPTSPS-YSP 1642
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1823 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1882
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1883 PKYSPTSPTYSPTSPKGSTYSP 1904
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1781 TPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTS 1840
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1841 PTYSPTTPKYSPTSPT-YSP 1859
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1809 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1868
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1869 PKYSPTSPTYSPTS-PKYSP 1887
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1837 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1896
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1897 PKGSTYSPTSPGYSPTS 1913
Score = 102 bits (254), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1774 TPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS 1833
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP +T +Y+P
Sbjct: 1834 PKYSPTSPTYSP-TTPKYSP 1852
Score = 102 bits (253), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1760 SPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTS 1819
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1820 PKYSPTSPKYSPTS-PKYSP 1838
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1802 TPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS 1861
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S + Y+P
Sbjct: 1862 PVYTPTSPKYSPTSPT-YSP 1880
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1539 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1598
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1599 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1635
Score = 95.1 bits (235), Expect = 3e-18
Identities = 51/87 (58%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
+P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P S
Sbjct: 1718 TPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1777
Query: 383 PQFSPST-GYSPSQPGYSPSSTSQYTP 306
P ++PS+ YSPS P YSP+S +YTP
Sbjct: 1778 PTYTPSSPSYSPSSPSYSPTS-PKYTP 1803
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 1851 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYS 1910
Query: 371 P-STGYSPSQPGYSPSSTSQ 315
P S YS + P SP + +
Sbjct: 1911 PTSPTYSLTSPAISPDDSDE 1930
Score = 58.9 bits (141), Expect = 2e-07
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP +
Sbjct: 1511 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYE 1563
Query: 371 PST--GYSPSQPGYSPSSTSQYTP 306
P + GY+P P YSP+S S Y+P
Sbjct: 1564 PRSPGGYTPQSPSYSPTSPS-YSP 1586
Score = 53.5 bits (127), Expect = 9e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1499 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1555
Query: 356 SPSQPGYSPSSTSQYTPQT 300
SP+ P Y P S YTPQ+
Sbjct: 1556 SPTSPAYEPRSPGGYTPQS 1574
[19][TOP]
>UniRef100_UPI0000F2BF12 PREDICTED: similar to RNA polymerase II isoform 1 n=1 Tax=Monodelphis
domestica RepID=UPI0000F2BF12
Length = 1970
Score = 115 bits (289), Expect = 2e-24
Identities = 56/82 (68%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1735 SPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTS 1794
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSPSS +YTPQ+
Sbjct: 1795 PSYSPTSPSYSPSS-PRYTPQS 1815
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1623 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1682
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1683 PSYSPTSPSYSPTSPS-YSP 1701
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1644 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1703
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1704 PSYSPTSPSYSPTSPS-YSP 1722
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1665 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1724
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1725 PSYSPTSPSYSPTSPS-YSP 1743
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1686 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1745
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S S Y+P
Sbjct: 1746 PNYSPTSPNYTPTSPS-YSP 1764
Score = 112 bits (279), Expect = 2e-23
Identities = 56/86 (65%), Positives = 68/86 (79%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 1770 SPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSS 1829
Query: 362 -GYSPSQPGYSPSSTS------QYTP 306
YSP+ P Y+P+S S +YTP
Sbjct: 1830 PSYSPTSPKYTPTSPSYSPSSPEYTP 1855
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1669 PSYSPTSPSYSPTSPS-YSP 1687
Score = 110 bits (274), Expect = 8e-23
Identities = 53/80 (66%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1707 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTS 1766
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S + Y+P
Sbjct: 1767 PSYSPTSPNYTPTSPN-YSP 1785
Score = 107 bits (268), Expect = 4e-22
Identities = 54/87 (62%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1749 SPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS 1808
Query: 362 --------GYSPSQPGYSPSSTSQYTP 306
Y+PS P YSPSS S Y+P
Sbjct: 1809 PRYTPQSPTYTPSSPSYSPSSPS-YSP 1834
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1861 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1920
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1921 PKYSPTSPTYSPTSPKGSTYSP 1942
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1819 TPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTS 1878
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1879 PTYSPTTPKYSPTSPT-YSP 1897
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1847 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1907 PKYSPTSPTYSPTS-PKYSP 1925
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1875 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1934
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1935 PKGSTYSPTSPGYSPTS 1951
Score = 102 bits (254), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1812 TPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS 1871
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP +T +Y+P
Sbjct: 1872 PKYSPTSPTYSP-TTPKYSP 1890
Score = 102 bits (253), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1798 SPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTS 1857
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1858 PKYSPTSPKYSPTS-PKYSP 1876
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1840 TPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS 1899
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S + Y+P
Sbjct: 1900 PVYTPTSPKYSPTSPT-YSP 1918
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 95.1 bits (235), Expect = 3e-18
Identities = 51/87 (58%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
+P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P S
Sbjct: 1756 TPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1815
Query: 383 PQFSPST-GYSPSQPGYSPSSTSQYTP 306
P ++PS+ YSPS P YSP+S +YTP
Sbjct: 1816 PTYTPSSPSYSPSSPSYSPTS-PKYTP 1841
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 1889 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYS 1948
Query: 371 P-STGYSPSQPGYSPSSTSQ 315
P S YS + P SP + +
Sbjct: 1949 PTSPTYSLTSPAISPDDSDE 1968
Score = 58.9 bits (141), Expect = 2e-07
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP +
Sbjct: 1549 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYE 1601
Query: 371 PST--GYSPSQPGYSPSSTSQYTP 306
P + GY+P P YSP+S S Y+P
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPS-YSP 1624
Score = 54.3 bits (129), Expect = 5e-06
Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPS 366
S S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S
Sbjct: 1534 SVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMS 1590
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P Y P S YTPQ+
Sbjct: 1591 PSYSPTSPAYEPRSPGGYTPQS 1612
[20][TOP]
>UniRef100_UPI0000EBDCD2 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
isoform 4 n=1 Tax=Bos taurus RepID=UPI0000EBDCD2
Length = 1970
Score = 115 bits (289), Expect = 2e-24
Identities = 56/82 (68%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1735 SPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTS 1794
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSPSS +YTPQ+
Sbjct: 1795 PSYSPTSPSYSPSS-PRYTPQS 1815
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1623 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1682
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1683 PSYSPTSPSYSPTSPS-YSP 1701
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1644 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1703
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1704 PSYSPTSPSYSPTSPS-YSP 1722
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1665 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1724
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1725 PSYSPTSPSYSPTSPS-YSP 1743
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1686 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1745
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S S Y+P
Sbjct: 1746 PNYSPTSPNYTPTSPS-YSP 1764
Score = 112 bits (279), Expect = 2e-23
Identities = 56/86 (65%), Positives = 68/86 (79%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 1770 SPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSS 1829
Query: 362 -GYSPSQPGYSPSSTS------QYTP 306
YSP+ P Y+P+S S +YTP
Sbjct: 1830 PSYSPTSPKYTPTSPSYSPSSPEYTP 1855
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1669 PSYSPTSPSYSPTSPS-YSP 1687
Score = 110 bits (274), Expect = 8e-23
Identities = 53/80 (66%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1707 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTS 1766
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S + Y+P
Sbjct: 1767 PSYSPTSPNYTPTSPN-YSP 1785
Score = 107 bits (268), Expect = 4e-22
Identities = 54/87 (62%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1749 SPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS 1808
Query: 362 --------GYSPSQPGYSPSSTSQYTP 306
Y+PS P YSPSS S Y+P
Sbjct: 1809 PRYTPQSPTYTPSSPSYSPSSPS-YSP 1834
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1861 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1920
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1921 PKYSPTSPTYSPTSPKGSTYSP 1942
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1819 TPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTS 1878
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1879 PTYSPTTPKYSPTSPT-YSP 1897
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1847 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1907 PKYSPTSPTYSPTS-PKYSP 1925
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1875 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1934
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1935 PKGSTYSPTSPGYSPTS 1951
Score = 102 bits (254), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1812 TPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS 1871
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP +T +Y+P
Sbjct: 1872 PKYSPTSPTYSP-TTPKYSP 1890
Score = 102 bits (253), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1798 SPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTS 1857
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1858 PKYSPTSPKYSPTS-PKYSP 1876
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1840 TPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS 1899
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S + Y+P
Sbjct: 1900 PVYTPTSPKYSPTSPT-YSP 1918
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 95.1 bits (235), Expect = 3e-18
Identities = 51/87 (58%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
+P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P S
Sbjct: 1756 TPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1815
Query: 383 PQFSPST-GYSPSQPGYSPSSTSQYTP 306
P ++PS+ YSPS P YSP+S +YTP
Sbjct: 1816 PTYTPSSPSYSPSSPSYSPTS-PKYTP 1841
Score = 58.9 bits (141), Expect = 2e-07
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP +
Sbjct: 1549 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYE 1601
Query: 371 PST--GYSPSQPGYSPSSTSQYTP 306
P + GY+P P YSP+S S Y+P
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPS-YSP 1624
Score = 54.3 bits (129), Expect = 5e-06
Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPS 366
S S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S
Sbjct: 1534 SVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMS 1590
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P Y P S YTPQ+
Sbjct: 1591 PSYSPTSPAYEPRSPGGYTPQS 1612
[21][TOP]
>UniRef100_UPI0001B7A25C UPI0001B7A25C related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25C
Length = 1968
Score = 115 bits (289), Expect = 2e-24
Identities = 56/82 (68%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1737 SPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTS 1796
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSPSS +YTPQ+
Sbjct: 1797 PSYSPTSPSYSPSS-PRYTPQS 1817
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1625 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1684
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1685 PSYSPTSPSYSPTSPS-YSP 1703
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1646 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1705
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1706 PSYSPTSPSYSPTSPS-YSP 1724
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1667 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1726
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1727 PSYSPTSPSYSPTSPS-YSP 1745
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1688 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1747
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S S Y+P
Sbjct: 1748 PNYSPTSPNYTPTSPS-YSP 1766
Score = 112 bits (279), Expect = 2e-23
Identities = 56/86 (65%), Positives = 68/86 (79%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 1772 SPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSS 1831
Query: 362 -GYSPSQPGYSPSSTS------QYTP 306
YSP+ P Y+P+S S +YTP
Sbjct: 1832 PSYSPTSPKYTPTSPSYSPSSPEYTP 1857
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1611 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1670
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1671 PSYSPTSPSYSPTSPS-YSP 1689
Score = 110 bits (274), Expect = 8e-23
Identities = 53/80 (66%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1709 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTS 1768
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S + Y+P
Sbjct: 1769 PSYSPTSPNYTPTSPN-YSP 1787
Score = 107 bits (268), Expect = 4e-22
Identities = 54/87 (62%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1751 SPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS 1810
Query: 362 --------GYSPSQPGYSPSSTSQYTP 306
Y+PS P YSPSS S Y+P
Sbjct: 1811 PRYTPQSPTYTPSSPSYSPSSPS-YSP 1836
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1604 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1663
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1664 PSYSPTSPSYSPTSPS-YSP 1682
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1863 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1922
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1923 PKYSPTSPTYSPTSPKGSTYSP 1944
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1821 TPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTS 1880
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1881 PTYSPTTPKYSPTSPT-YSP 1899
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1849 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1908
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1909 PKYSPTSPTYSPTS-PKYSP 1927
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1877 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1936
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1937 PKGSTYSPTSPGYSPTS 1953
Score = 102 bits (254), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1814 TPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS 1873
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP +T +Y+P
Sbjct: 1874 PKYSPTSPTYSP-TTPKYSP 1892
Score = 102 bits (253), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1800 SPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTS 1859
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1860 PKYSPTSPKYSPTS-PKYSP 1878
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1842 TPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS 1901
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S + Y+P
Sbjct: 1902 PVYTPTSPKYSPTSPT-YSP 1920
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1579 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1638
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1639 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1675
Score = 95.1 bits (235), Expect = 3e-18
Identities = 51/87 (58%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
+P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P S
Sbjct: 1758 TPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1817
Query: 383 PQFSPST-GYSPSQPGYSPSSTSQYTP 306
P ++PS+ YSPS P YSP+S +YTP
Sbjct: 1818 PTYTPSSPSYSPSSPSYSPTS-PKYTP 1843
Score = 58.9 bits (141), Expect = 2e-07
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP +
Sbjct: 1551 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYE 1603
Query: 371 PST--GYSPSQPGYSPSSTSQYTP 306
P + GY+P P YSP+S S Y+P
Sbjct: 1604 PRSPGGYTPQSPSYSPTSPS-YSP 1626
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>UniRef100_UPI0001B7A25B UPI0001B7A25B related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25B
Length = 1932
Score = 115 bits (289), Expect = 2e-24
Identities = 56/82 (68%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1697 SPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTS 1756
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSPSS +YTPQ+
Sbjct: 1757 PSYSPTSPSYSPSS-PRYTPQS 1777
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1585 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1644
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1645 PSYSPTSPSYSPTSPS-YSP 1663
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1606 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1665
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1666 PSYSPTSPSYSPTSPS-YSP 1684
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1627 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1686
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1687 PSYSPTSPSYSPTSPS-YSP 1705
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1648 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1707
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S S Y+P
Sbjct: 1708 PNYSPTSPNYTPTSPS-YSP 1726
Score = 112 bits (279), Expect = 2e-23
Identities = 56/86 (65%), Positives = 68/86 (79%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 1732 SPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSS 1791
Query: 362 -GYSPSQPGYSPSSTS------QYTP 306
YSP+ P Y+P+S S +YTP
Sbjct: 1792 PSYSPTSPKYTPTSPSYSPSSPEYTP 1817
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1571 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1630
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1631 PSYSPTSPSYSPTSPS-YSP 1649
Score = 110 bits (274), Expect = 8e-23
Identities = 53/80 (66%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1669 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTS 1728
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S + Y+P
Sbjct: 1729 PSYSPTSPNYTPTSPN-YSP 1747
Score = 107 bits (268), Expect = 4e-22
Identities = 54/87 (62%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1711 SPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS 1770
Query: 362 --------GYSPSQPGYSPSSTSQYTP 306
Y+PS P YSPSS S Y+P
Sbjct: 1771 PRYTPQSPTYTPSSPSYSPSSPS-YSP 1796
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1564 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1623
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1624 PSYSPTSPSYSPTSPS-YSP 1642
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1823 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1882
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1883 PKYSPTSPTYSPTSPKGSTYSP 1904
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1781 TPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTS 1840
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1841 PTYSPTTPKYSPTSPT-YSP 1859
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1809 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1868
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1869 PKYSPTSPTYSPTS-PKYSP 1887
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1837 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1896
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1897 PKGSTYSPTSPGYSPTS 1913
Score = 102 bits (254), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1774 TPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS 1833
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP +T +Y+P
Sbjct: 1834 PKYSPTSPTYSP-TTPKYSP 1852
Score = 102 bits (253), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1760 SPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTS 1819
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1820 PKYSPTSPKYSPTS-PKYSP 1838
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1802 TPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS 1861
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S + Y+P
Sbjct: 1862 PVYTPTSPKYSPTSPT-YSP 1880
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1539 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1598
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1599 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1635
Score = 95.1 bits (235), Expect = 3e-18
Identities = 51/87 (58%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
+P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P S
Sbjct: 1718 TPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1777
Query: 383 PQFSPST-GYSPSQPGYSPSSTSQYTP 306
P ++PS+ YSPS P YSP+S +YTP
Sbjct: 1778 PTYTPSSPSYSPSSPSYSPTS-PKYTP 1803
Score = 90.5 bits (223), Expect = 7e-17
Identities = 49/88 (55%), Positives = 63/88 (71%), Gaps = 4/88 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1851 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP--- 1907
Query: 371 PSTGYSPSQPGYSPSSTSQYTPQTNDKD 288
GYSP+ P YS +S + +P+ +D++
Sbjct: 1908 ---GYSPTSPTYSLTSPA-ISPEDSDEE 1931
Score = 58.9 bits (141), Expect = 2e-07
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP +
Sbjct: 1511 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYE 1563
Query: 371 PST--GYSPSQPGYSPSSTSQYTP 306
P + GY+P P YSP+S S Y+P
Sbjct: 1564 PRSPGGYTPQSPSYSPTSPS-YSP 1586
Score = 53.5 bits (127), Expect = 9e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1499 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1555
Query: 356 SPSQPGYSPSSTSQYTPQT 300
SP+ P Y P S YTPQ+
Sbjct: 1556 SPTSPAYEPRSPGGYTPQS 1574
[23][TOP]
>UniRef100_UPI0000DA33D8 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) n=1 Tax=Rattus norvegicus RepID=UPI0000DA33D8
Length = 1970
Score = 115 bits (289), Expect = 2e-24
Identities = 56/82 (68%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1735 SPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTS 1794
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSPSS +YTPQ+
Sbjct: 1795 PSYSPTSPSYSPSS-PRYTPQS 1815
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1623 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1682
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1683 PSYSPTSPSYSPTSPS-YSP 1701
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1644 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1703
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1704 PSYSPTSPSYSPTSPS-YSP 1722
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1665 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1724
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1725 PSYSPTSPSYSPTSPS-YSP 1743
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1686 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1745
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S S Y+P
Sbjct: 1746 PNYSPTSPNYTPTSPS-YSP 1764
Score = 112 bits (279), Expect = 2e-23
Identities = 56/86 (65%), Positives = 68/86 (79%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 1770 SPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSS 1829
Query: 362 -GYSPSQPGYSPSSTS------QYTP 306
YSP+ P Y+P+S S +YTP
Sbjct: 1830 PSYSPTSPKYTPTSPSYSPSSPEYTP 1855
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1669 PSYSPTSPSYSPTSPS-YSP 1687
Score = 110 bits (274), Expect = 8e-23
Identities = 53/80 (66%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1707 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTS 1766
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S + Y+P
Sbjct: 1767 PSYSPTSPNYTPTSPN-YSP 1785
Score = 107 bits (268), Expect = 4e-22
Identities = 54/87 (62%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1749 SPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS 1808
Query: 362 --------GYSPSQPGYSPSSTSQYTP 306
Y+PS P YSPSS S Y+P
Sbjct: 1809 PRYTPQSPTYTPSSPSYSPSSPS-YSP 1834
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1861 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1920
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1921 PKYSPTSPTYSPTSPKGSTYSP 1942
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1819 TPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTS 1878
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1879 PTYSPTTPKYSPTSPT-YSP 1897
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1847 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1907 PKYSPTSPTYSPTS-PKYSP 1925
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1875 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1934
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1935 PKGSTYSPTSPGYSPTS 1951
Score = 102 bits (254), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1812 TPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS 1871
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP +T +Y+P
Sbjct: 1872 PKYSPTSPTYSP-TTPKYSP 1890
Score = 102 bits (253), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1798 SPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTS 1857
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1858 PKYSPTSPKYSPTS-PKYSP 1876
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1840 TPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS 1899
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S + Y+P
Sbjct: 1900 PVYTPTSPKYSPTSPT-YSP 1918
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 95.1 bits (235), Expect = 3e-18
Identities = 51/87 (58%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
+P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P S
Sbjct: 1756 TPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1815
Query: 383 PQFSPST-GYSPSQPGYSPSSTSQYTP 306
P ++PS+ YSPS P YSP+S +YTP
Sbjct: 1816 PTYTPSSPSYSPSSPSYSPTS-PKYTP 1841
Score = 90.5 bits (223), Expect = 7e-17
Identities = 49/88 (55%), Positives = 63/88 (71%), Gaps = 4/88 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1889 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP--- 1945
Query: 371 PSTGYSPSQPGYSPSSTSQYTPQTNDKD 288
GYSP+ P YS +S + +P+ +D++
Sbjct: 1946 ---GYSPTSPTYSLTSPA-ISPEDSDEE 1969
Score = 58.9 bits (141), Expect = 2e-07
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP +
Sbjct: 1549 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYE 1601
Query: 371 PST--GYSPSQPGYSPSSTSQYTP 306
P + GY+P P YSP+S S Y+P
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPS-YSP 1624
Score = 54.3 bits (129), Expect = 5e-06
Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPS 366
S S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S
Sbjct: 1534 SVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMS 1590
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P Y P S YTPQ+
Sbjct: 1591 PSYSPTSPAYEPRSPGGYTPQS 1612
[24][TOP]
>UniRef100_O35559 DNA-directed RNA polymerase n=1 Tax=Cricetulus griseus
RepID=O35559_CRIGR
Length = 1970
Score = 115 bits (289), Expect = 2e-24
Identities = 56/82 (68%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1735 SPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTS 1794
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSPSS +YTPQ+
Sbjct: 1795 PSYSPTSPSYSPSS-PRYTPQS 1815
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1623 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1682
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1683 PSYSPTSPSYSPTSPS-YSP 1701
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1644 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1703
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1704 PSYSPTSPSYSPTSPS-YSP 1722
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1665 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1724
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1725 PSYSPTSPSYSPTSPS-YSP 1743
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1686 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1745
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S S Y+P
Sbjct: 1746 PNYSPTSPNYTPTSPS-YSP 1764
Score = 112 bits (279), Expect = 2e-23
Identities = 56/86 (65%), Positives = 68/86 (79%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 1770 SPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSS 1829
Query: 362 -GYSPSQPGYSPSSTS------QYTP 306
YSP+ P Y+P+S S +YTP
Sbjct: 1830 PSYSPTSPKYTPTSPSYSPSSPEYTP 1855
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1669 PSYSPTSPSYSPTSPS-YSP 1687
Score = 110 bits (274), Expect = 8e-23
Identities = 53/80 (66%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1707 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTS 1766
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S + Y+P
Sbjct: 1767 PSYSPTSPNYTPTSPN-YSP 1785
Score = 107 bits (268), Expect = 4e-22
Identities = 54/87 (62%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1749 SPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS 1808
Query: 362 --------GYSPSQPGYSPSSTSQYTP 306
Y+PS P YSPSS S Y+P
Sbjct: 1809 PRYTPQSPTYTPSSPSYSPSSPS-YSP 1834
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1861 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1920
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1921 PKYSPTSPTYSPTSPKGSTYSP 1942
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1819 TPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTS 1878
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1879 PTYSPTTPKYSPTSPT-YSP 1897
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1847 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1907 PKYSPTSPTYSPTS-PKYSP 1925
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1875 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1934
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1935 PKGSTYSPTSPGYSPTS 1951
Score = 102 bits (254), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1812 TPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS 1871
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP +T +Y+P
Sbjct: 1872 PKYSPTSPTYSP-TTPKYSP 1890
Score = 102 bits (253), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1798 SPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTS 1857
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1858 PKYSPTSPKYSPTS-PKYSP 1876
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1840 TPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS 1899
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S + Y+P
Sbjct: 1900 PVYTPTSPKYSPTSPT-YSP 1918
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 95.1 bits (235), Expect = 3e-18
Identities = 51/87 (58%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
+P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P S
Sbjct: 1756 TPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1815
Query: 383 PQFSPST-GYSPSQPGYSPSSTSQYTP 306
P ++PS+ YSPS P YSP+S +YTP
Sbjct: 1816 PTYTPSSPSYSPSSPSYSPTS-PKYTP 1841
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 1889 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYS 1948
Query: 371 P-STGYSPSQPGYSPSSTSQ 315
P S YS + P SP + +
Sbjct: 1949 PTSPTYSLTSPAISPDDSDE 1968
Score = 58.9 bits (141), Expect = 2e-07
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP +
Sbjct: 1549 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYE 1601
Query: 371 PST--GYSPSQPGYSPSSTSQYTP 306
P + GY+P P YSP+S S Y+P
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPS-YSP 1624
Score = 54.3 bits (129), Expect = 5e-06
Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPS 366
S S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S
Sbjct: 1534 SVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMS 1590
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P Y P S YTPQ+
Sbjct: 1591 PSYSPTSPAYEPRSPGGYTPQS 1612
[25][TOP]
>UniRef100_O08847 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=O08847_MOUSE
Length = 1966
Score = 115 bits (289), Expect = 2e-24
Identities = 56/82 (68%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1735 SPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTS 1794
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSPSS +YTPQ+
Sbjct: 1795 PSYSPTSPSYSPSS-PRYTPQS 1815
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1623 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1682
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1683 PSYSPTSPSYSPTSPS-YSP 1701
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1644 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1703
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1704 PSYSPTSPSYSPTSPS-YSP 1722
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1665 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1724
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1725 PSYSPTSPSYSPTSPS-YSP 1743
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1686 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1745
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S S Y+P
Sbjct: 1746 PNYSPTSPNYTPTSPS-YSP 1764
Score = 112 bits (279), Expect = 2e-23
Identities = 56/86 (65%), Positives = 68/86 (79%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 1770 SPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSS 1829
Query: 362 -GYSPSQPGYSPSSTS------QYTP 306
YSP+ P Y+P+S S +YTP
Sbjct: 1830 PSYSPTSPKYTPTSPSYSPSSPEYTP 1855
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1669 PSYSPTSPSYSPTSPS-YSP 1687
Score = 110 bits (274), Expect = 8e-23
Identities = 53/80 (66%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1707 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTS 1766
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S + Y+P
Sbjct: 1767 PSYSPTSPNYTPTSPN-YSP 1785
Score = 107 bits (268), Expect = 4e-22
Identities = 54/87 (62%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1749 SPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS 1808
Query: 362 --------GYSPSQPGYSPSSTSQYTP 306
Y+PS P YSPSS S Y+P
Sbjct: 1809 PRYTPQSPTYTPSSPSYSPSSPS-YSP 1834
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1861 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1920
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1921 PKYSPTSPTYSPTSPKGSTYSP 1942
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1819 TPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTS 1878
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1879 PTYSPTTPKYSPTSPT-YSP 1897
Score = 103 bits (258), Expect = 6e-21
Identities = 52/91 (57%), Positives = 68/91 (74%), Gaps = 7/91 (7%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1875 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1934
Query: 365 ---TGYSPSQPGYSPSST--SQYTPQTNDKD 288
+ YSP+ PGYSP+S S +P +D++
Sbjct: 1935 PKGSTYSPTSPGYSPTSPTYSLTSPAISDEE 1965
Score = 103 bits (256), Expect = 1e-20
Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+P SP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1847 SPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1907 PKYSPTSPTYSPTS-PKYSP 1925
Score = 102 bits (254), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1812 TPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTS 1871
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP +T +Y+P
Sbjct: 1872 PKYSPTSPTYSP-TTPKYSP 1890
Score = 102 bits (254), Expect = 2e-20
Identities = 50/80 (62%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSPTSP YSPTSP YSPTSP+YSP++P YSP+SP S SP Y+P+SP++SP S
Sbjct: 1854 TPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTS 1913
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1914 PTYSPTSPKYSPTSPT-YSP 1932
Score = 102 bits (253), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1798 SPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPAS 1857
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1858 PKYSPTSPKYSPTS-PKYSP 1876
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 97.1 bits (240), Expect = 7e-19
Identities = 47/80 (58%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSP+SP Y+P SP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1840 TPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS 1899
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S + Y+P
Sbjct: 1900 PVYTPTSPKYSPTSPT-YSP 1918
Score = 95.1 bits (235), Expect = 3e-18
Identities = 51/87 (58%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
+P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P S
Sbjct: 1756 TPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1815
Query: 383 PQFSPST-GYSPSQPGYSPSSTSQYTP 306
P ++PS+ YSPS P YSP+S +YTP
Sbjct: 1816 PTYTPSSPSYSPSSPSYSPTS-PKYTP 1841
Score = 58.9 bits (141), Expect = 2e-07
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP +
Sbjct: 1549 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYE 1601
Query: 371 PST--GYSPSQPGYSPSSTSQYTP 306
P + GY+P P YSP+S S Y+P
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPS-YSP 1624
Score = 54.3 bits (129), Expect = 5e-06
Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPS 366
S S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S
Sbjct: 1534 SVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMS 1590
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P Y P S YTPQ+
Sbjct: 1591 PSYSPTSPAYEPRSPGGYTPQS 1612
[26][TOP]
>UniRef100_Q30BD9 DNA-directed RNA polymerase n=1 Tax=Glaucocystis nostochinearum
RepID=Q30BD9_9EUKA
Length = 1852
Score = 115 bits (289), Expect = 2e-24
Identities = 61/86 (70%), Positives = 67/86 (77%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+ SPTSPSYSPTSPSYSP+SP+YSPSSP S SP YSPSSP +SPS+
Sbjct: 1701 SPTSPSYSPTSPSCSPTSPSYSPTSPSYSPTSPSYSPSSPSCSPASPTYSPSSPSYSPSS 1760
Query: 362 -GYSPSQPGYSPSSTS------QYTP 306
YSPS P YSPSS S QYTP
Sbjct: 1761 PSYSPSSPSYSPSSPSYSPSSPQYTP 1786
Score = 112 bits (281), Expect = 1e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1603 SPTSPSYSPTSPAYSPTSPSYSPTSPGYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTS 1662
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
GYSP+ P YSP+S S Y+P
Sbjct: 1663 PGYSPTSPSYSPTSPS-YSP 1681
Score = 111 bits (278), Expect = 3e-23
Identities = 56/80 (70%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1631 SPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTS 1690
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1691 PSYSPTSPSYSPTSPS-YSP 1709
Score = 110 bits (276), Expect = 5e-23
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1624 SPTSPGYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTS 1683
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1684 PSYSPTSPSYSPTSPS-YSP 1702
Score = 110 bits (276), Expect = 5e-23
Identities = 58/82 (70%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPS SP+SP+YSP+SP S SP YSPSSP SP S
Sbjct: 1687 SPTSPSYSPTSPSYSPTSPSYSPTSPSCSPTSPSYSPTSPSYSPTSPSYSPSSPSCSPAS 1746
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSPS P YSPSS S Y+P +
Sbjct: 1747 PTYSPSSPSYSPSSPS-YSPSS 1767
Score = 110 bits (275), Expect = 6e-23
Identities = 56/89 (62%), Positives = 66/89 (74%), Gaps = 9/89 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP
Sbjct: 1652 SPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1711
Query: 368 ------STGYSPSQPGYSPSSTSQYTPQT 300
S YSP+ P YSP+S S Y+P +
Sbjct: 1712 PSCSPTSPSYSPTSPSYSPTSPS-YSPSS 1739
Score = 109 bits (273), Expect = 1e-22
Identities = 56/80 (70%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
S SSP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1582 SASSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPGYSPTSPSYSPTS 1641
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1642 PRYSPTSPSYSPTSPS-YSP 1660
Score = 107 bits (266), Expect = 7e-22
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YS +SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1575 SPTSPGYSASSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPGYSPTS 1634
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1635 PSYSPTSPRYSPTSPS-YSP 1653
Score = 105 bits (263), Expect = 2e-21
Identities = 54/87 (62%), Positives = 65/87 (74%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTSP YS +SPSYSPTSPSYSP+SP+YSP+SP S SP YSP+S
Sbjct: 1561 SPASPSYSAASPRYSPTSPGYSASSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS 1620
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P +SP S GYSP+ P YSP+S +Y+P
Sbjct: 1621 PSYSPTSPGYSPTSPSYSPTS-PRYSP 1646
Score = 104 bits (259), Expect = 5e-21
Identities = 56/85 (65%), Positives = 65/85 (76%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP+ SP SP+YSP+SPSYSPSSP+YSPSSP S SP YSPSSPQ++P S
Sbjct: 1729 SPTSPSYSPSSPSCSPASPTYSPSSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPQYTPAS 1788
Query: 365 TGYSP-----SQPGYSPSSTSQYTP 306
YSP S P YSP TSQY+P
Sbjct: 1789 ANYSPPSPLHSSPAYSP--TSQYSP 1811
Score = 102 bits (255), Expect = 1e-20
Identities = 55/94 (58%), Positives = 65/94 (69%), Gaps = 13/94 (13%)
Frame = -2
Query: 539 SPSSPY-SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSP--------- 390
SPSSP SP SP YSP+SPSYSP+SPSYSPSSP+YSPSSP S SP Y+P
Sbjct: 1736 SPSSPSCSPASPTYSPSSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPQYTPASANYSPPS 1795
Query: 389 ---SSPQFSPSTGYSPSQPGYSPSSTSQYTPQTN 297
SSP +SP++ YSP+ P Y SS + YTPQ+N
Sbjct: 1796 PLHSSPAYSPTSQYSPTSPAYGASSPA-YTPQSN 1828
Score = 98.6 bits (244), Expect = 2e-19
Identities = 55/89 (61%), Positives = 66/89 (74%), Gaps = 9/89 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP +YSP+SP S SP YSP+S
Sbjct: 1666 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSCSPTSPSYSPTS 1725
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTPQT 300
P +SP S YSPS P SP+S + Y+P +
Sbjct: 1726 PSYSPTSPSYSPSSPSCSPASPT-YSPSS 1753
Score = 97.1 bits (240), Expect = 7e-19
Identities = 49/84 (58%), Positives = 57/84 (67%), Gaps = 8/84 (9%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP----- 369
S YSP SP+YS SP YSPTSP YS SSP+YSP+SP S SP YSP+SP +SP
Sbjct: 1557 SPSYSPASPSYSAASPRYSPTSPGYSASSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAY 1616
Query: 368 ---STGYSPSQPGYSPSSTSQYTP 306
S YSP+ PGYSP+S S Y+P
Sbjct: 1617 SPTSPSYSPTSPGYSPTSPS-YSP 1639
Score = 92.4 bits (228), Expect = 2e-17
Identities = 49/87 (56%), Positives = 58/87 (66%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSP--------TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SP YSP+SP YSP SPSYSP SPSYS +SP YSP+SP S SP YSP+S
Sbjct: 1533 SPHRGYSPSSPPYSPRSPGFDYAASPSYSPASPSYSAASPRYSPTSPGYSASSPSYSPTS 1592
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P +SP S YSP+ P YSP+S + Y+P
Sbjct: 1593 PSYSPTSPSYSPTSPSYSPTSPA-YSP 1618
Score = 60.5 bits (145), Expect = 8e-08
Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Frame = -2
Query: 485 SYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFS-PSTGYSPSQPGYSPSSTSQY 312
S+SP YSPSSP YSP SP ++ SP YSP+SP +S S YSP+ PGYS SS S Y
Sbjct: 1531 SFSPHR-GYSPSSPPYSPRSPGFDYAASPSYSPASPSYSAASPRYSPTSPGYSASSPS-Y 1588
Query: 311 TP 306
+P
Sbjct: 1589 SP 1590
Score = 59.7 bits (143), Expect = 1e-07
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SPSSP Y+P S NYSP SP + SSP YSP+S Y S SP Y SSP ++P +
Sbjct: 1778 SPSSPQYTPASANYSPPSPLH---------SSPAYSPTSQY-SPTSPAYGASSPAYTPQS 1827
Query: 362 GYSP-SQPGYSPSSTSQYTPQTNDK 291
SP S P + S SQ +P + K
Sbjct: 1828 NLSPASLPSPALSPVSQKSPPQDRK 1852
[27][TOP]
>UniRef100_A7S8F9 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
RepID=A7S8F9_NEMVE
Length = 1929
Score = 115 bits (289), Expect = 2e-24
Identities = 56/82 (68%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1707 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSS 1766
Query: 362 -GYSPSQPGYSPSSTSQYTPQT 300
YSPS P YSP S S +P +
Sbjct: 1767 PSYSPSSPSYSPQSPSYASPSS 1788
Score = 113 bits (283), Expect = 8e-24
Identities = 55/79 (69%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
SPSS YSP SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1624 SPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1684 SYSPTSPSYSPTSPS-YSP 1701
Score = 113 bits (283), Expect = 8e-24
Identities = 56/82 (68%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1686 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1745
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSP+S S Y+P +
Sbjct: 1746 PSYSPTSPSYSPTSPS-YSPSS 1766
Score = 113 bits (283), Expect = 8e-24
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSPSSP +SPS+
Sbjct: 1714 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSS 1773
Query: 362 -GYSPSQPGYSPSSTSQYTP 306
YSP P Y+ S+ +Y+P
Sbjct: 1774 PSYSPQSPSYASPSSPKYSP 1793
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1644 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1703
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1704 PSYSPTSPSYSPTSPS-YSP 1722
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1665 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1724
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1725 PSYSPTSPSYSPTSPS-YSP 1743
Score = 112 bits (280), Expect = 2e-23
Identities = 56/80 (70%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSP SP+YSPTSP YSPTSP+YSP+SP+YSPSSP S SP Y+P+SP +SP S
Sbjct: 1785 SPSSPKYSPASPSYSPTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPSYSPAS 1844
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS P YSPSS +YTP
Sbjct: 1845 PSYSPSSPSYSPSS-PRYTP 1863
Score = 109 bits (272), Expect = 1e-22
Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP YSPTSP+YSP SPSYSPSSP YSP+SP + SP YSP+SP +SPS+
Sbjct: 1792 SPASPSYSPTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSPSS 1851
Query: 362 -GYSPSQPGYSPSSTSQYTP 306
YSPS P Y+P+S QY+P
Sbjct: 1852 PSYSPSSPRYTPTS-PQYSP 1870
Score = 108 bits (270), Expect = 2e-22
Identities = 54/82 (65%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP YSPTSPSY+P SPSYSP+SP+YSPSSP S SP Y+P+SPQ+SP S
Sbjct: 1813 SPASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPSSPRYTPTSPQYSPTS 1872
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSP +T YTP +
Sbjct: 1873 PKYSPASPNYSP-TTPSYTPMS 1893
Score = 107 bits (268), Expect = 4e-22
Identities = 59/95 (62%), Positives = 67/95 (70%), Gaps = 17/95 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP--------YNSGVSPDYSPS 387
SP+SP YSPTSP+YSPTSPSYSPTSPSYSPSSP+YSPSSP Y S SP YSP+
Sbjct: 1735 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQSPSYASPSSPKYSPA 1794
Query: 386 SPQFSP--------STGYSPSQPGYSPSSTSQYTP 306
SP +SP S YSP+ P YSPSS +Y+P
Sbjct: 1795 SPSYSPTSPKYSPTSPNYSPASPSYSPSS-PKYSP 1828
Score = 107 bits (267), Expect = 5e-22
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 3/81 (3%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF-SPS 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSPSSP S SP YSP SP + SPS
Sbjct: 1728 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQSPSYASPS 1787
Query: 365 T-GYSPSQPGYSPSSTSQYTP 306
+ YSP+ P YSP+S +Y+P
Sbjct: 1788 SPKYSPASPSYSPTS-PKYSP 1807
Score = 107 bits (266), Expect = 7e-22
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSPNYSP SPSYSP+SP YSP+SP+Y+P+SP S SP YSPSSP +SPS+
Sbjct: 1799 SPTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPSS 1858
Query: 362 -GYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S +Y+P
Sbjct: 1859 PRYTPTSPQYSPTS-PKYSP 1877
Score = 106 bits (265), Expect = 9e-22
Identities = 59/89 (66%), Positives = 68/89 (76%), Gaps = 9/89 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP +YSP+SP S SP YSP+S
Sbjct: 1693 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1752
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTPQT 300
P +SP S YSPS P YSPSS S Y+PQ+
Sbjct: 1753 PSYSPTSPSYSPSSPSYSPSSPS-YSPQS 1780
Score = 104 bits (260), Expect = 3e-21
Identities = 54/82 (65%), Positives = 65/82 (79%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPN--YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP YSP+SP+ YSP SPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP
Sbjct: 1614 SPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1673
Query: 368 -STGYSPSQPGYSPSSTSQYTP 306
S YSP+ P YSP+S S Y+P
Sbjct: 1674 TSPSYSPTSPSYSPTSPS-YSP 1694
Score = 104 bits (259), Expect = 5e-21
Identities = 54/82 (65%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPS--YSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP YSPTSP YSP+SPS YSP SPSYSP+SP+YSP+SP S SP YSP+SP +SP
Sbjct: 1607 SPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1666
Query: 368 -STGYSPSQPGYSPSSTSQYTP 306
S YSP+ P YSP+S S Y+P
Sbjct: 1667 TSPSYSPTSPSYSPTSPS-YSP 1687
Score = 99.8 bits (247), Expect = 1e-19
Identities = 52/81 (64%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSPTSPSYSPTSPS--YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP- 369
PSSP SP SP+YSPTSP YSP+SPS YSP+SP+YSP+SP S SP YSP+SP +SP
Sbjct: 1601 PSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660
Query: 368 STGYSPSQPGYSPSSTSQYTP 306
S YSP+ P YSP+S S Y+P
Sbjct: 1661 SPSYSPTSPSYSPTSPS-YSP 1680
Score = 99.0 bits (245), Expect = 2e-19
Identities = 52/82 (63%), Positives = 62/82 (75%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT--YSPSSPYNSGVSPDYSPSSPQFSP 369
SPSSP + P+SP+ SP SPSYSPTSP YSPSSP+ YSP+SP S SP YSP+SP +SP
Sbjct: 1593 SPSSPAFMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSP 1652
Query: 368 -STGYSPSQPGYSPSSTSQYTP 306
S YSP+ P YSP+S S Y+P
Sbjct: 1653 TSPSYSPTSPSYSPTSPS-YSP 1673
Score = 92.8 bits (229), Expect = 1e-17
Identities = 48/79 (60%), Positives = 58/79 (73%), Gaps = 3/79 (3%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN--SGVSPDYSPSSPQFSP-ST 363
S YSP+SP + P+SPS SP SPSYSP+SP YSPSSP + S SP YSP+SP +SP S
Sbjct: 1589 SPGYSPSSPAFMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSP 1648
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1649 SYSPTSPSYSPTSPS-YSP 1666
Score = 92.4 bits (228), Expect = 2e-17
Identities = 54/90 (60%), Positives = 63/90 (70%), Gaps = 10/90 (11%)
Frame = -2
Query: 539 SPSSP-YSPTSPNY-SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 366
SPSSP YSP SP+Y SP+SP YSP SPSYSP+SP YSP+SP S SP YSPSSP++SP+
Sbjct: 1770 SPSSPSYSPQSPSYASPSSPKYSPASPSYSPTSPKYSPTSPNYSPASPSYSPSSPKYSPT 1829
Query: 365 ----TGYSPSQP----GYSPSSTSQYTPQT 300
T SPS YSPSS S Y+P +
Sbjct: 1830 SPSYTPASPSYSPASPSYSPSSPS-YSPSS 1858
Score = 86.7 bits (213), Expect = 1e-15
Identities = 37/62 (59%), Positives = 52/62 (83%), Gaps = 1/62 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
+P+SP YSP SP+YSP+SPSYSP+SP Y+P+SP YSP+SP S SP+YSP++P ++P +
Sbjct: 1834 TPASPSYSPASPSYSPSSPSYSPSSPRYTPTSPQYSPTSPKYSPASPNYSPTTPSYTPMS 1893
Query: 362 GY 357
G+
Sbjct: 1894 GH 1895
Score = 81.3 bits (199), Expect = 4e-14
Identities = 47/84 (55%), Positives = 58/84 (69%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSP--TSPNYSPT----SPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
+P SP SP TSP Y P+ SP YSP+SP++ PSSP+ SP+SP S SP YSPS
Sbjct: 1568 TPGSPVSPGPTSP-YIPSPAAASPGYSPSSPAFMPSSPSMSPASPSYSPTSPGYSPS--- 1623
Query: 377 FSPSTGYSPSQPGYSPSSTSQYTP 306
SPS+GYSP+ P YSP+S S Y+P
Sbjct: 1624 -SPSSGYSPASPSYSPTSPS-YSP 1645
Score = 80.9 bits (198), Expect = 5e-14
Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 6/83 (7%)
Frame = -2
Query: 536 PSSPYSPT----SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPD--YSPSSPQF 375
P+SPY P+ SP YSP+SP++ P+SPS SP+SP+YSP+SP S SP YSP+SP
Sbjct: 1577 PTSPYIPSPAAASPGYSPSSPAFMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPS- 1635
Query: 374 SPSTGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1636 -----YSPTSPSYSPTSPS-YSP 1652
Score = 69.7 bits (169), Expect = 1e-10
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SPSSP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+ +P Y+P S P
Sbjct: 1848 SPSSPSYSPSSPRYTPTSPQYSPTSPKYSPASPNYSPT-------TPSYTPMSGHIVP 1898
Score = 57.8 bits (138), Expect = 5e-07
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 22/97 (22%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPS---------YSPTSPSYSPSSPTY-SPSSPY---NSGVSPDYSP 390
S +P + ++SP++ S +SP+ S +P SP P+SPY + SP YSP
Sbjct: 1535 SGMTPGAASFSPSAASDASGMSPGGFSPSWMSPTPGSPVSPGPTSPYIPSPAAASPGYSP 1594
Query: 389 SSPQFSPST--------GYSPSQPGYSPSS-TSQYTP 306
SSP F PS+ YSP+ PGYSPSS +S Y+P
Sbjct: 1595 SSPAFMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSP 1631
[28][TOP]
>UniRef100_B4E3V7 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4E3V7_HUMAN
Length = 1935
Score = 115 bits (289), Expect = 2e-24
Identities = 56/82 (68%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1700 SPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTS 1759
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSPSS +YTPQ+
Sbjct: 1760 PSYSPTSPSYSPSS-PRYTPQS 1780
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1616 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1675
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1676 PSYSPTSPSYSPTSPS-YSP 1694
Score = 112 bits (279), Expect = 2e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTS NYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1588 SPTSPSYSPTSSNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1647
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1648 PSYSPTSPSYSPTSPS-YSP 1666
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1696
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1697 PSYSPTSPSYSPTSPN-YSP 1715
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1658 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1717
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1718 PNYTPTSPSYSPTSPS-YSP 1736
Score = 111 bits (277), Expect = 4e-23
Identities = 54/77 (70%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
SS YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1598 SSNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1657
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 1658 SPTSPSYSPTSPS-YSP 1673
Score = 110 bits (276), Expect = 5e-23
Identities = 55/86 (63%), Positives = 68/86 (79%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 1735 SPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSS 1794
Query: 362 -GYSPSQPGYSPS------STSQYTP 306
YSP+ P Y+P+ S+ +YTP
Sbjct: 1795 PSYSPTSPKYTPTSPPYSPSSPEYTP 1820
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP + SP YSP+SP +SP S
Sbjct: 1679 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTS 1738
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1739 PNYTPTSPNYSPTSPS-YSP 1757
Score = 107 bits (268), Expect = 4e-22
Identities = 54/87 (62%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1714 SPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS 1773
Query: 362 --------GYSPSQPGYSPSSTSQYTP 306
Y+PS P YSPSS S Y+P
Sbjct: 1774 PRYTPQSPTYTPSSPSYSPSSPS-YSP 1799
Score = 107 bits (267), Expect = 5e-22
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTS +YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1574 TPQSPSYSPTSPSYSPTSPSYSPTSSNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1633
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1634 PSYSPTSPSYSPTSPS-YSP 1652
Score = 105 bits (261), Expect = 3e-21
Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPT P+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1826 SPTSPKYSPTSPKYSPTGPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1885
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1886 PQYSPTSPTYSPTSPKGSTYSP 1907
Score = 103 bits (257), Expect = 8e-21
Identities = 52/80 (65%), Positives = 61/80 (76%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+S YSP+SP S SP YSP+SP +SP S
Sbjct: 1567 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSSNYSPTSPSYSPTSPSYSPTSPSYSPTS 1626
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1627 PSYSPTSPSYSPTSPS-YSP 1645
Score = 102 bits (253), Expect = 2e-20
Identities = 48/77 (62%), Positives = 60/77 (77%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+ P YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1840 SPTGPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPQYSPTSPTYSPTS 1899
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1900 PKGSTYSPTSPGYSPTS 1916
Score = 101 bits (252), Expect = 3e-20
Identities = 50/80 (62%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
+PSSP YSP+SP+YSPTSP Y+PTSP YSPSSP Y+P+SP S SP YSP+SP++SP+
Sbjct: 1784 TPSSPSYSPSSPSYSPTSPKYTPTSPPYSPSSPEYTPTSPKFSPTSPKYSPTSPKYSPTG 1843
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1844 PTYSPTTPKYSPTSPT-YSP 1862
Score = 100 bits (248), Expect = 9e-20
Identities = 48/80 (60%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1763 SPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPPYSPSSPEYTPTS 1822
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
+SP+ P YSP+S +Y+P
Sbjct: 1823 PKFSPTSPKYSPTS-PKYSP 1841
Score = 97.1 bits (240), Expect = 7e-19
Identities = 47/84 (55%), Positives = 58/84 (69%), Gaps = 8/84 (9%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP----- 369
S PYSP+SP Y+PTSP +SPTSP YSP+SP YSP+ P S +P YSP+SP +SP
Sbjct: 1808 SPPYSPSSPEYTPTSPKFSPTSPKYSPTSPKYSPTGPTYSPTTPKYSPTSPTYSPTSPVY 1867
Query: 368 ---STGYSPSQPGYSPSSTSQYTP 306
S YSP+ P YSP+S QY+P
Sbjct: 1868 TPTSPKYSPTSPTYSPTS-PQYSP 1890
Score = 95.1 bits (235), Expect = 3e-18
Identities = 51/87 (58%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
+P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P S
Sbjct: 1721 TPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1780
Query: 383 PQFSPST-GYSPSQPGYSPSSTSQYTP 306
P ++PS+ YSPS P YSP+S +YTP
Sbjct: 1781 PTYTPSSPSYSPSSPSYSPTS-PKYTP 1806
Score = 94.4 bits (233), Expect = 5e-18
Identities = 53/98 (54%), Positives = 63/98 (64%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+S
Sbjct: 1542 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSSNY 1601
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1602 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1638
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 1854 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPQYSPTSPTYSPTSPKGSTYSPTSPGYS 1913
Query: 371 P-STGYSPSQPGYSPSSTSQ 315
P S YS + P SP + +
Sbjct: 1914 PTSPTYSLTSPAISPDDSDE 1933
Score = 58.9 bits (141), Expect = 2e-07
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP +
Sbjct: 1514 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYE 1566
Query: 371 PST--GYSPSQPGYSPSSTSQYTP 306
P + GY+P P YSP+S S Y+P
Sbjct: 1567 PRSPGGYTPQSPSYSPTSPS-YSP 1589
Score = 54.3 bits (129), Expect = 5e-06
Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPS 366
S S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S
Sbjct: 1499 SVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMS 1555
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P Y P S YTPQ+
Sbjct: 1556 PSYSPTSPAYEPRSPGGYTPQS 1577
[29][TOP]
>UniRef100_B4DET1 cDNA FLJ53860, highly similar to DNA-directed RNA polymerase II
largest subunit (EC 2.7.7.6) n=1 Tax=Homo sapiens
RepID=B4DET1_HUMAN
Length = 855
Score = 115 bits (289), Expect = 2e-24
Identities = 56/82 (68%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 634 SPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTS 693
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSPSS +YTPQ+
Sbjct: 694 PSYSPTSPSYSPSS-PRYTPQS 714
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 522 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 581
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 582 PSYSPTSPSYSPTSPS-YSP 600
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 543 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 602
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 603 PSYSPTSPSYSPTSPS-YSP 621
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 564 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 623
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 624 PSYSPTSPSYSPTSPS-YSP 642
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 585 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 644
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S S Y+P
Sbjct: 645 PNYSPTSPNYTPTSPS-YSP 663
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 508 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 567
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 568 PSYSPTSPSYSPTSPS-YSP 586
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 669 SPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSS 728
Query: 362 -GYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S +Y+P
Sbjct: 729 PSYSPTSPKYTPTS-PKYSP 747
Score = 110 bits (274), Expect = 8e-23
Identities = 53/80 (66%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 606 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTS 665
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S + Y+P
Sbjct: 666 PSYSPTSPNYTPTSPN-YSP 684
Score = 107 bits (268), Expect = 4e-22
Identities = 54/87 (62%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 648 SPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS 707
Query: 362 --------GYSPSQPGYSPSSTSQYTP 306
Y+PS P YSPSS S Y+P
Sbjct: 708 PRYTPQSPTYTPSSPSYSPSSPS-YSP 733
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 501 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 560
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 561 PSYSPTSPSYSPTSPS-YSP 579
Score = 105 bits (261), Expect = 3e-21
Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+ P +SP S
Sbjct: 746 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTGPTYSPTS 805
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 806 PKYSPTSPTYSPTSPKGSTYSP 827
Score = 103 bits (258), Expect = 6e-21
Identities = 51/82 (62%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSP+SP Y+P SP+Y+PSSP+YSPSSP S SP Y+P+SP++SP S
Sbjct: 690 SPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPKYSPTS 749
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSP+S + Y+P T
Sbjct: 750 PKYSPTSPKYSPTSPT-YSPTT 770
Score = 103 bits (256), Expect = 1e-20
Identities = 51/80 (63%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 732 SPTSPKYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 791
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 792 PKYSPTGPTYSPTS-PKYSP 810
Score = 102 bits (253), Expect = 2e-20
Identities = 50/80 (62%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
+P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+T
Sbjct: 711 TPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTT 770
Query: 362 -GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S YTP
Sbjct: 771 PKYSPTSPTYSPTS-PVYTP 789
Score = 101 bits (252), Expect = 3e-20
Identities = 48/77 (62%), Positives = 60/77 (77%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+ P S SP YSP+SP +SP+
Sbjct: 760 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTGPTYSPTSPKYSPTSPTYSPTS 819
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 820 PKGSTYSPTSPGYSPTS 836
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 476 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 535
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 536 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 572
Score = 95.5 bits (236), Expect = 2e-18
Identities = 54/94 (57%), Positives = 67/94 (71%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSP--------------SYSPSSPTYSPSSPYNSGVS 405
SP+SP YSPTSP+YSPTSPSYSP+SP SYSPSSP+YSP+SP + S
Sbjct: 683 SPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTS 742
Query: 404 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
P YSP+SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 743 PKYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 775
Score = 95.1 bits (235), Expect = 3e-18
Identities = 51/87 (58%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
+P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P S
Sbjct: 655 TPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 714
Query: 383 PQFSPST-GYSPSQPGYSPSSTSQYTP 306
P ++PS+ YSPS P YSP+S +YTP
Sbjct: 715 PTYTPSSPSYSPSSPSYSPTS-PKYTP 740
Score = 88.2 bits (217), Expect = 3e-16
Identities = 46/80 (57%), Positives = 56/80 (70%), Gaps = 5/80 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPT P+YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 774 SPTSPTYSPTSPVYTPTSPKYSPTGPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYS 833
Query: 371 P-STGYSPSQPGYSPSSTSQ 315
P S YS + P SP + +
Sbjct: 834 PTSPTYSLTSPAISPDDSDE 853
Score = 58.9 bits (141), Expect = 2e-07
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP +
Sbjct: 448 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYE 500
Query: 371 PST--GYSPSQPGYSPSSTSQYTP 306
P + GY+P P YSP+S S Y+P
Sbjct: 501 PRSPGGYTPQSPSYSPTSPS-YSP 523
Score = 54.3 bits (129), Expect = 5e-06
Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPS 366
S S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S
Sbjct: 433 SVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMS 489
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P Y P S YTPQ+
Sbjct: 490 PSYSPTSPAYEPRSPGGYTPQS 511
[30][TOP]
>UniRef100_A6NN93 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=A6NN93_HUMAN
Length = 1970
Score = 115 bits (289), Expect = 2e-24
Identities = 56/82 (68%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1735 SPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTS 1794
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSPSS +YTPQ+
Sbjct: 1795 PSYSPTSPSYSPSS-PRYTPQS 1815
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1623 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1682
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1683 PSYSPTSPSYSPTSPS-YSP 1701
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1644 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1703
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1704 PSYSPTSPSYSPTSPS-YSP 1722
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1665 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1724
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1725 PSYSPTSPSYSPTSPS-YSP 1743
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1686 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1745
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S S Y+P
Sbjct: 1746 PNYSPTSPNYTPTSPS-YSP 1764
Score = 112 bits (279), Expect = 2e-23
Identities = 56/86 (65%), Positives = 68/86 (79%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 1770 SPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSS 1829
Query: 362 -GYSPSQPGYSPSSTS------QYTP 306
YSP+ P Y+P+S S +YTP
Sbjct: 1830 PSYSPASPKYTPTSPSYSPSSPEYTP 1855
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1669 PSYSPTSPSYSPTSPS-YSP 1687
Score = 110 bits (274), Expect = 8e-23
Identities = 53/80 (66%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1707 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTS 1766
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S + Y+P
Sbjct: 1767 PSYSPTSPNYTPTSPN-YSP 1785
Score = 107 bits (268), Expect = 4e-22
Identities = 54/87 (62%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1749 SPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS 1808
Query: 362 --------GYSPSQPGYSPSSTSQYTP 306
Y+PS P YSPSS S Y+P
Sbjct: 1809 PRYTPQSPTYTPSSPSYSPSSPS-YSP 1834
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1861 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1920
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1921 PKYSPTSPTYSPTSPKGSTYSP 1942
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1847 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1907 PKYSPTSPTYSPTS-PKYSP 1925
Score = 103 bits (256), Expect = 1e-20
Identities = 51/80 (63%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+PSSP YSP+SP+YSP SP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1819 TPSSPSYSPSSPSYSPASPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTS 1878
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1879 PTYSPTTPKYSPTSPT-YSP 1897
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1875 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1934
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1935 PKGSTYSPTSPGYSPTS 1951
Score = 102 bits (253), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1798 SPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPASPKYTPTSPSYSPSSPEYTPTS 1857
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1858 PKYSPTSPKYSPTS-PKYSP 1876
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1840 TPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS 1899
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S + Y+P
Sbjct: 1900 PVYTPTSPKYSPTSPT-YSP 1918
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 95.1 bits (235), Expect = 3e-18
Identities = 51/87 (58%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
+P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P S
Sbjct: 1756 TPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1815
Query: 383 PQFSPST-GYSPSQPGYSPSSTSQYTP 306
P ++PS+ YSPS P YSP+S +YTP
Sbjct: 1816 PTYTPSSPSYSPSSPSYSPAS-PKYTP 1841
Score = 93.6 bits (231), Expect = 8e-18
Identities = 50/87 (57%), Positives = 63/87 (72%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP----YSPTS----PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SPSSP SPT P+YSP+SPSYSP SP Y+P+SP+YSPSSP + SP YSP+S
Sbjct: 1805 SPSSPRYTPQSPTYTPSSPSYSPSSPSYSPASPKYTPTSPSYSPSSPEYTPTSPKYSPTS 1864
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P++SP S YSP+ P YSP +T +Y+P
Sbjct: 1865 PKYSPTSPKYSPTSPTYSP-TTPKYSP 1890
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 1889 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYS 1948
Query: 371 P-STGYSPSQPGYSPSSTSQ 315
P S YS + P SP + +
Sbjct: 1949 PTSPTYSLTSPAISPDDSDE 1968
Score = 58.9 bits (141), Expect = 2e-07
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP +
Sbjct: 1549 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYE 1601
Query: 371 PST--GYSPSQPGYSPSSTSQYTP 306
P + GY+P P YSP+S S Y+P
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPS-YSP 1624
Score = 54.3 bits (129), Expect = 5e-06
Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPS 366
S S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S
Sbjct: 1534 SVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMS 1590
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P Y P S YTPQ+
Sbjct: 1591 PSYSPTSPAYEPRSPGGYTPQS 1612
[31][TOP]
>UniRef100_Q6CBQ3 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6CBQ3_YARLI
Length = 1750
Score = 115 bits (289), Expect = 2e-24
Identities = 59/96 (61%), Positives = 73/96 (76%), Gaps = 8/96 (8%)
Frame = -2
Query: 539 SPSSP------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSP 381
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSPSSP +N+G S YSP+SP
Sbjct: 1655 SPTSPSYSPTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKFNAGASTSYSPTSP 1714
Query: 380 QFSP-STGYSPSQPGYSPSSTSQYTPQTNDKDERGK 276
+SP S YSP+ P YSP+S S Y+P + D ++ K
Sbjct: 1715 SYSPTSPSYSPTSPSYSPTSPS-YSPGSGDSKDKEK 1749
Score = 114 bits (286), Expect = 3e-24
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1592 SPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1651
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S +P
Sbjct: 1652 PSYSPTSPSYSPTSYSPTSP 1671
Score = 110 bits (274), Expect = 8e-23
Identities = 56/87 (64%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SPSSP YSP+SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+S
Sbjct: 1578 SPSSPAFAATSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1637
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P +SP S YSP+ P YSP+S S Y+P
Sbjct: 1638 PSYSPTSPSYSPTSPSYSPTSPS-YSP 1663
Score = 104 bits (259), Expect = 5e-21
Identities = 52/85 (61%), Positives = 65/85 (76%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSS-----PYNSGVSPDYSPSSPQ 378
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+S P S SP YSP+SP
Sbjct: 1627 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSYSPTSPSYSPTSPSYSPTSPS 1686
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTP 306
+SP S YSPS P ++ +++ Y+P
Sbjct: 1687 YSPTSPSYSPSSPKFNAGASTSYSP 1711
Score = 99.4 bits (246), Expect = 1e-19
Identities = 51/89 (57%), Positives = 64/89 (71%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSP 390
SPSSP +SP+SP ++ TSPSYSP+SPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1562 SPSSPGMGLGAASPSFSPSSPAFAATSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPSYSP 1621
Query: 389 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1622 TSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1649
Score = 96.3 bits (238), Expect = 1e-18
Identities = 56/94 (59%), Positives = 67/94 (71%), Gaps = 14/94 (14%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSP-----D 399
SP+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP
Sbjct: 1606 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1665
Query: 398 YSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 300
YSP+SP +SP S YSP+ P YSP+S S Y+P +
Sbjct: 1666 YSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPSS 1698
Score = 87.4 bits (215), Expect = 6e-16
Identities = 52/105 (49%), Positives = 65/105 (61%), Gaps = 27/105 (25%)
Frame = -2
Query: 539 SPSSPYSP----------TSPNYSPTSP---------SYSP-------TSPSYSPSSPTY 438
+P+SP+S TSP+YSP+SP S+SP TSPSYSPSSP+Y
Sbjct: 1539 TPTSPFSSFGAASPGFAATSPSYSPSSPGMGLGAASPSFSPSSPAFAATSPSYSPSSPSY 1598
Query: 437 SPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
SP+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1599 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1642
[32][TOP]
>UniRef100_P08775 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Mus musculus
RepID=RPB1_MOUSE
Length = 1970
Score = 115 bits (289), Expect = 2e-24
Identities = 56/82 (68%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1735 SPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTS 1794
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSPSS +YTPQ+
Sbjct: 1795 PSYSPTSPSYSPSS-PRYTPQS 1815
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1623 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1682
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1683 PSYSPTSPSYSPTSPS-YSP 1701
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1644 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1703
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1704 PSYSPTSPSYSPTSPS-YSP 1722
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1665 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1724
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1725 PSYSPTSPSYSPTSPS-YSP 1743
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1686 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1745
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S S Y+P
Sbjct: 1746 PNYSPTSPNYTPTSPS-YSP 1764
Score = 112 bits (279), Expect = 2e-23
Identities = 56/86 (65%), Positives = 68/86 (79%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 1770 SPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSS 1829
Query: 362 -GYSPSQPGYSPSSTS------QYTP 306
YSP+ P Y+P+S S +YTP
Sbjct: 1830 PSYSPTSPKYTPTSPSYSPSSPEYTP 1855
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1669 PSYSPTSPSYSPTSPS-YSP 1687
Score = 110 bits (274), Expect = 8e-23
Identities = 53/80 (66%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1707 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTS 1766
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S + Y+P
Sbjct: 1767 PSYSPTSPNYTPTSPN-YSP 1785
Score = 107 bits (268), Expect = 4e-22
Identities = 54/87 (62%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1749 SPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS 1808
Query: 362 --------GYSPSQPGYSPSSTSQYTP 306
Y+PS P YSPSS S Y+P
Sbjct: 1809 PRYTPQSPTYTPSSPSYSPSSPS-YSP 1834
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1861 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1920
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1921 PKYSPTSPTYSPTSPKGSTYSP 1942
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1819 TPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTS 1878
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1879 PTYSPTTPKYSPTSPT-YSP 1897
Score = 103 bits (256), Expect = 1e-20
Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+P SP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1847 SPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1907 PKYSPTSPTYSPTS-PKYSP 1925
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1875 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1934
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1935 PKGSTYSPTSPGYSPTS 1951
Score = 102 bits (254), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1812 TPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTS 1871
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP +T +Y+P
Sbjct: 1872 PKYSPTSPTYSP-TTPKYSP 1890
Score = 102 bits (254), Expect = 2e-20
Identities = 50/80 (62%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSPTSP YSPTSP YSPTSP+YSP++P YSP+SP S SP Y+P+SP++SP S
Sbjct: 1854 TPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTS 1913
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1914 PTYSPTSPKYSPTSPT-YSP 1932
Score = 102 bits (253), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1798 SPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPAS 1857
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1858 PKYSPTSPKYSPTS-PKYSP 1876
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 97.1 bits (240), Expect = 7e-19
Identities = 47/80 (58%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSP+SP Y+P SP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1840 TPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS 1899
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S + Y+P
Sbjct: 1900 PVYTPTSPKYSPTSPT-YSP 1918
Score = 95.1 bits (235), Expect = 3e-18
Identities = 51/87 (58%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
+P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P S
Sbjct: 1756 TPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1815
Query: 383 PQFSPST-GYSPSQPGYSPSSTSQYTP 306
P ++PS+ YSPS P YSP+S +YTP
Sbjct: 1816 PTYTPSSPSYSPSSPSYSPTS-PKYTP 1841
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 1889 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYS 1948
Query: 371 P-STGYSPSQPGYSPSSTSQ 315
P S YS + P SP + +
Sbjct: 1949 PTSPTYSLTSPAISPDDSDE 1968
Score = 58.9 bits (141), Expect = 2e-07
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP +
Sbjct: 1549 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYE 1601
Query: 371 PST--GYSPSQPGYSPSSTSQYTP 306
P + GY+P P YSP+S S Y+P
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPS-YSP 1624
Score = 54.3 bits (129), Expect = 5e-06
Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPS 366
S S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S
Sbjct: 1534 SVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMS 1590
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P Y P S YTPQ+
Sbjct: 1591 PSYSPTSPAYEPRSPGGYTPQS 1612
[33][TOP]
>UniRef100_P24928 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Euarchontoglires
RepID=RPB1_HUMAN
Length = 1970
Score = 115 bits (289), Expect = 2e-24
Identities = 56/82 (68%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1735 SPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTS 1794
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSPSS +YTPQ+
Sbjct: 1795 PSYSPTSPSYSPSS-PRYTPQS 1815
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1623 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1682
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1683 PSYSPTSPSYSPTSPS-YSP 1701
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1644 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1703
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1704 PSYSPTSPSYSPTSPS-YSP 1722
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1665 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1724
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1725 PSYSPTSPSYSPTSPS-YSP 1743
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1686 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1745
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S S Y+P
Sbjct: 1746 PNYSPTSPNYTPTSPS-YSP 1764
Score = 112 bits (279), Expect = 2e-23
Identities = 56/86 (65%), Positives = 68/86 (79%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 1770 SPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSS 1829
Query: 362 -GYSPSQPGYSPSSTS------QYTP 306
YSP+ P Y+P+S S +YTP
Sbjct: 1830 PSYSPTSPKYTPTSPSYSPSSPEYTP 1855
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1669 PSYSPTSPSYSPTSPS-YSP 1687
Score = 110 bits (274), Expect = 8e-23
Identities = 53/80 (66%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1707 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTS 1766
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S + Y+P
Sbjct: 1767 PSYSPTSPNYTPTSPN-YSP 1785
Score = 107 bits (268), Expect = 4e-22
Identities = 54/87 (62%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1749 SPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS 1808
Query: 362 --------GYSPSQPGYSPSSTSQYTP 306
Y+PS P YSPSS S Y+P
Sbjct: 1809 PRYTPQSPTYTPSSPSYSPSSPS-YSP 1834
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1861 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1920
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1921 PKYSPTSPTYSPTSPKGSTYSP 1942
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1819 TPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTS 1878
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1879 PTYSPTTPKYSPTSPT-YSP 1897
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1847 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1907 PKYSPTSPTYSPTS-PKYSP 1925
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1875 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1934
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1935 PKGSTYSPTSPGYSPTS 1951
Score = 102 bits (254), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1812 TPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS 1871
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP +T +Y+P
Sbjct: 1872 PKYSPTSPTYSP-TTPKYSP 1890
Score = 102 bits (253), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1798 SPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTS 1857
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1858 PKYSPTSPKYSPTS-PKYSP 1876
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1840 TPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS 1899
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S + Y+P
Sbjct: 1900 PVYTPTSPKYSPTSPT-YSP 1918
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 95.1 bits (235), Expect = 3e-18
Identities = 51/87 (58%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
+P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P S
Sbjct: 1756 TPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1815
Query: 383 PQFSPST-GYSPSQPGYSPSSTSQYTP 306
P ++PS+ YSPS P YSP+S +YTP
Sbjct: 1816 PTYTPSSPSYSPSSPSYSPTS-PKYTP 1841
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 1889 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYS 1948
Query: 371 P-STGYSPSQPGYSPSSTSQ 315
P S YS + P SP + +
Sbjct: 1949 PTSPTYSLTSPAISPDDSDE 1968
Score = 58.9 bits (141), Expect = 2e-07
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP +
Sbjct: 1549 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYE 1601
Query: 371 PST--GYSPSQPGYSPSSTSQYTP 306
P + GY+P P YSP+S S Y+P
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPS-YSP 1624
Score = 54.3 bits (129), Expect = 5e-06
Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPS 366
S S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S
Sbjct: 1534 SVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMS 1590
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P Y P S YTPQ+
Sbjct: 1591 PSYSPTSPAYEPRSPGGYTPQS 1612
[34][TOP]
>UniRef100_P11414 DNA-directed RNA polymerase II subunit RPB1 (Fragment) n=1
Tax=Cricetulus griseus RepID=RPB1_CRIGR
Length = 467
Score = 115 bits (289), Expect = 2e-24
Identities = 56/82 (68%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 232 SPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTS 291
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSPSS +YTPQ+
Sbjct: 292 PSYSPTSPSYSPSS-PRYTPQS 312
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 120 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 179
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 180 PSYSPTSPSYSPTSPS-YSP 198
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 141 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 200
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 201 PSYSPTSPSYSPTSPS-YSP 219
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 162 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 221
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 222 PSYSPTSPSYSPTSPS-YSP 240
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 183 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 242
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S S Y+P
Sbjct: 243 PNYSPTSPNYTPTSPS-YSP 261
Score = 112 bits (279), Expect = 2e-23
Identities = 56/86 (65%), Positives = 68/86 (79%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PSSP +SPS+
Sbjct: 267 SPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSS 326
Query: 362 -GYSPSQPGYSPSSTS------QYTP 306
YSP+ P Y+P+S S +YTP
Sbjct: 327 PSYSPTSPKYTPTSPSYSPSSPEYTP 352
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 106 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 165
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 166 PSYSPTSPSYSPTSPS-YSP 184
Score = 110 bits (274), Expect = 8e-23
Identities = 53/80 (66%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 204 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTS 263
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S + Y+P
Sbjct: 264 PSYSPTSPNYTPTSPN-YSP 282
Score = 107 bits (268), Expect = 4e-22
Identities = 54/87 (62%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 246 SPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSS 305
Query: 362 --------GYSPSQPGYSPSSTSQYTP 306
Y+PS P YSPSS S Y+P
Sbjct: 306 PRYTPQSPTYTPSSPSYSPSSPS-YSP 331
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 99 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 158
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 159 PSYSPTSPSYSPTSPS-YSP 177
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 358 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 417
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 418 PKYSPTSPTYSPTSPKGSTYSP 439
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 316 TPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTS 375
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 376 PTYSPTTPKYSPTSPT-YSP 394
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 344 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 403
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 404 PKYSPTSPTYSPTS-PKYSP 422
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 372 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 431
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 432 PKGSTYSPTSPGYSPTS 448
Score = 102 bits (254), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 309 TPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS 368
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP +T +Y+P
Sbjct: 369 PKYSPTSPTYSP-TTPKYSP 387
Score = 102 bits (253), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 295 SPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTS 354
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 355 PKYSPTSPKYSPTS-PKYSP 373
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 337 TPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS 396
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S + Y+P
Sbjct: 397 PVYTPTSPKYSPTSPT-YSP 415
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 74 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 133
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 134 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 170
Score = 95.1 bits (235), Expect = 3e-18
Identities = 51/87 (58%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
+P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP +YSP+SP S SP Y+P S
Sbjct: 253 TPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 312
Query: 383 PQFSPST-GYSPSQPGYSPSSTSQYTP 306
P ++PS+ YSPS P YSP+S +YTP
Sbjct: 313 PTYTPSSPSYSPSSPSYSPTS-PKYTP 338
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 386 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYS 445
Query: 371 P-STGYSPSQPGYSPSSTSQ 315
P S YS + P SP + +
Sbjct: 446 PTSPTYSLTSPAISPDDSDE 465
Score = 58.9 bits (141), Expect = 2e-07
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP +
Sbjct: 46 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYE 98
Query: 371 PST--GYSPSQPGYSPSSTSQYTP 306
P + GY+P P YSP+S S Y+P
Sbjct: 99 PRSPGGYTPQSPSYSPTSPS-YSP 121
Score = 53.5 bits (127), Expect = 9e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 34 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 90
Query: 356 SPSQPGYSPSSTSQYTPQT 300
SP+ P Y P S YTPQ+
Sbjct: 91 SPTSPAYEPRSPGGYTPQS 109
[35][TOP]
>UniRef100_UPI0000E48673 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 1 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48673
Length = 1880
Score = 115 bits (288), Expect = 2e-24
Identities = 57/82 (69%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1662 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSS 1721
Query: 362 -GYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSP+S S Y+PQ+
Sbjct: 1722 PKYSPTSPSYSPTSPS-YSPQS 1742
Score = 114 bits (285), Expect = 4e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSPSSP++SP S
Sbjct: 1669 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTS 1728
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP S S Y+P
Sbjct: 1729 PSYSPTSPSYSPQSPS-YSP 1747
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1585 SPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1644
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1645 PSYSPTSPSYSPTSPS-YSP 1663
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1606 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1665
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1666 PSYSPTSPSYSPTSPS-YSP 1684
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1627 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1686
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1687 PSYSPTSPSYSPTSPS-YSP 1705
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1648 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1707
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSPSS +Y+P
Sbjct: 1708 PSYSPTSPSYSPSS-PKYSP 1726
Score = 112 bits (281), Expect = 1e-23
Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP+YSPTSPSYSPTSP++SPSSPTYSP+SP S SP YSPSSP++SP S
Sbjct: 1753 SPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTS 1812
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1813 PTYSPTSPKYSPASPT-YSP 1831
Score = 111 bits (278), Expect = 3e-23
Identities = 56/82 (68%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1676 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTS 1735
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP P YSP S S Y+P +
Sbjct: 1736 PSYSPQSPSYSPGSPS-YSPSS 1756
Score = 111 bits (278), Expect = 3e-23
Identities = 57/80 (71%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP+YSPTSPSYSP SPSYSP SP+YSPSSP S SP YSP+SP +SP S
Sbjct: 1718 SPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTS 1777
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
+SPS P YSP+S S Y+P
Sbjct: 1778 PNFSPSSPTYSPASPS-YSP 1796
Score = 110 bits (274), Expect = 8e-23
Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
SPS YSPTSP+YSPTSP YSP SPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1565 SPSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1624
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1625 SYSPTSPSYSPTSPS-YSP 1642
Score = 108 bits (270), Expect = 2e-22
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP SP YSP+SP YSPTSPSYSPTSPSYSP+SP +SPSSP S SP YSP+SP++SPS+
Sbjct: 1746 SPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSS 1805
Query: 362 -GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1806 PKYSPTSPTYSPTS-PKYSP 1824
Score = 107 bits (268), Expect = 4e-22
Identities = 52/74 (70%), Positives = 61/74 (82%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSP+SP YSPTSPSYSP+SP+YSP SP S SP YSPSSP++SP S
Sbjct: 1704 SPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTS 1763
Query: 365 TGYSPSQPGYSPSS 324
YSP+ P YSP+S
Sbjct: 1764 PSYSPTSPSYSPTS 1777
Score = 106 bits (265), Expect = 9e-22
Identities = 55/92 (59%), Positives = 66/92 (71%), Gaps = 7/92 (7%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP YSP+SP YSPTSP+YSP+SP YSP+SP S SP YSPSSP +SP+
Sbjct: 1788 SPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTS 1847
Query: 365 ---TGYSPSQPGYSPSST--SQYTPQTNDKDE 285
+ YSP+ P YSP+S S +P D DE
Sbjct: 1848 PKGSTYSPTSPSYSPTSPSYSPTSPGMGDDDE 1879
Score = 105 bits (262), Expect = 2e-21
Identities = 58/82 (70%), Positives = 63/82 (76%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFS 372
SP+SP YSPTSP+YSPTSPSYSPTSPSYSPSSP YSP+SP S SP YSP SP S
Sbjct: 1690 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGS 1749
Query: 371 PSTGYSPSQPGYSPSSTSQYTP 306
PS YSPS P YSP+S S Y+P
Sbjct: 1750 PS--YSPSSPKYSPTSPS-YSP 1768
Score = 104 bits (260), Expect = 3e-21
Identities = 54/82 (65%), Positives = 62/82 (75%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP +SP+SP YSP SPSYSPTSP YSPSSP YSP+SP S SP YSP+SP +SP S
Sbjct: 1774 SPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTS 1833
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSPS P YSP+S S Y+P
Sbjct: 1834 PKYSPSSPTYSPTSPKGSTYSP 1855
Score = 103 bits (258), Expect = 6e-21
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP SP YSP SP+YSP+SP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1739 SPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTS 1798
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS P YSP+S + Y+P
Sbjct: 1799 PKYSPSSPKYSPTSPT-YSP 1817
Score = 88.2 bits (217), Expect = 3e-16
Identities = 49/87 (56%), Positives = 59/87 (67%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSPYSPT-SPNYSPT-------SPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
S S+ +SP SP +SP SP YSPTSPSYSP+SP YSP+SP S SP YSP+S
Sbjct: 1543 SESTGFSPAYSPAWSPQPQSPGSPSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTS 1602
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P +SP S YSP+ P YSP+S S Y+P
Sbjct: 1603 PSYSPTSPSYSPTSPSYSPTSPS-YSP 1628
Score = 60.8 bits (146), Expect = 6e-08
Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSP--SSPTYSPSSPYN--SGVSPDYSPSSPQFSP-S 366
S +P P +SP + + SP+YSP S SP SP S SP YSP+SP +SP S
Sbjct: 1529 SGMTPGGPGFSPANSESTGFSPAYSPAWSPQPQSPGSPSPGYSPTSPSYSPTSPGYSPAS 1588
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1589 PSYSPTSPSYSPTSPS-YSP 1607
[36][TOP]
>UniRef100_UPI0000E48672 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 2 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48672
Length = 1913
Score = 115 bits (288), Expect = 2e-24
Identities = 57/82 (69%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1695 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSS 1754
Query: 362 -GYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSP+S S Y+PQ+
Sbjct: 1755 PKYSPTSPSYSPTSPS-YSPQS 1775
Score = 114 bits (285), Expect = 4e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSPSSP++SP S
Sbjct: 1702 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTS 1761
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP S S Y+P
Sbjct: 1762 PSYSPTSPSYSPQSPS-YSP 1780
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1618 SPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1677
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1678 PSYSPTSPSYSPTSPS-YSP 1696
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1639 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1698
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1699 PSYSPTSPSYSPTSPS-YSP 1717
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1660 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1719
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1720 PSYSPTSPSYSPTSPS-YSP 1738
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1681 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1740
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSPSS +Y+P
Sbjct: 1741 PSYSPTSPSYSPSS-PKYSP 1759
Score = 112 bits (281), Expect = 1e-23
Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP+YSPTSPSYSPTSP++SPSSPTYSP+SP S SP YSPSSP++SP S
Sbjct: 1786 SPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTS 1845
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1846 PTYSPTSPKYSPASPT-YSP 1864
Score = 111 bits (278), Expect = 3e-23
Identities = 56/82 (68%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1709 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTS 1768
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP P YSP S S Y+P +
Sbjct: 1769 PSYSPQSPSYSPGSPS-YSPSS 1789
Score = 111 bits (278), Expect = 3e-23
Identities = 57/80 (71%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP+YSPTSPSYSP SPSYSP SP+YSPSSP S SP YSP+SP +SP S
Sbjct: 1751 SPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTS 1810
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
+SPS P YSP+S S Y+P
Sbjct: 1811 PNFSPSSPTYSPASPS-YSP 1829
Score = 111 bits (277), Expect = 4e-23
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1611 SPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1670
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1671 PSYSPTSPSYSPTSPS-YSP 1689
Score = 108 bits (270), Expect = 2e-22
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP SP YSP+SP YSPTSPSYSPTSPSYSP+SP +SPSSP S SP YSP+SP++SPS+
Sbjct: 1779 SPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSS 1838
Query: 362 -GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1839 PKYSPTSPTYSPTS-PKYSP 1857
Score = 107 bits (268), Expect = 4e-22
Identities = 52/74 (70%), Positives = 61/74 (82%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSP+SP YSPTSPSYSP+SP+YSP SP S SP YSPSSP++SP S
Sbjct: 1737 SPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTS 1796
Query: 365 TGYSPSQPGYSPSS 324
YSP+ P YSP+S
Sbjct: 1797 PSYSPTSPSYSPTS 1810
Score = 107 bits (267), Expect = 5e-22
Identities = 51/78 (65%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 360
P+SP +P SP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1592 PASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1651
Query: 359 YSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1652 YSPTSPSYSPTSPS-YSP 1668
Score = 106 bits (265), Expect = 9e-22
Identities = 55/92 (59%), Positives = 66/92 (71%), Gaps = 7/92 (7%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP YSP+SP YSPTSP+YSP+SP YSP+SP S SP YSPSSP +SP+
Sbjct: 1821 SPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTS 1880
Query: 365 ---TGYSPSQPGYSPSST--SQYTPQTNDKDE 285
+ YSP+ P YSP+S S +P D DE
Sbjct: 1881 PKGSTYSPTSPSYSPTSPSYSPTSPGMGDDDE 1912
Score = 105 bits (262), Expect = 2e-21
Identities = 58/82 (70%), Positives = 63/82 (76%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFS 372
SP+SP YSPTSP+YSPTSPSYSPTSPSYSPSSP YSP+SP S SP YSP SP S
Sbjct: 1723 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGS 1782
Query: 371 PSTGYSPSQPGYSPSSTSQYTP 306
PS YSPS P YSP+S S Y+P
Sbjct: 1783 PS--YSPSSPKYSPTSPS-YSP 1801
Score = 104 bits (260), Expect = 3e-21
Identities = 54/82 (65%), Positives = 62/82 (75%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP +SP+SP YSP SPSYSPTSP YSPSSP YSP+SP S SP YSP+SP +SP S
Sbjct: 1807 SPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTS 1866
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSPS P YSP+S S Y+P
Sbjct: 1867 PKYSPSSPTYSPTSPKGSTYSP 1888
Score = 104 bits (259), Expect = 5e-21
Identities = 52/83 (62%), Positives = 63/83 (75%), Gaps = 5/83 (6%)
Frame = -2
Query: 539 SPSSPY----SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 372
SP++P SPTSP+YSPTSP YSP SPSYSP+SP+YSP+SP S SP YSP+SP +S
Sbjct: 1594 SPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1653
Query: 371 P-STGYSPSQPGYSPSSTSQYTP 306
P S YSP+ P YSP+S S Y+P
Sbjct: 1654 PTSPSYSPTSPSYSPTSPS-YSP 1675
Score = 103 bits (258), Expect = 6e-21
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP SP YSP SP+YSP+SP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1772 SPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTS 1831
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS P YSP+S + Y+P
Sbjct: 1832 PKYSPSSPKYSPTSPT-YSP 1850
Score = 96.3 bits (238), Expect = 1e-18
Identities = 51/85 (60%), Positives = 60/85 (70%), Gaps = 8/85 (9%)
Frame = -2
Query: 536 PSSP-YSPTSPNY------SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
P SP YSP SP+Y +P SP YSPTSPSYSP+SP YSP+SP S SP YSP+SP
Sbjct: 1578 PMSPSYSPASPSYLPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPS 1637
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTP 306
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1638 YSPTSPSYSPTSPSYSPTSPS-YSP 1661
Score = 74.3 bits (181), Expect = 5e-12
Identities = 44/82 (53%), Positives = 55/82 (67%), Gaps = 8/82 (9%)
Frame = -2
Query: 527 PYSPTSPNYSPTSPSYS-PTSPSYSPSSPTY---SPSSPYNSG---VSPDYSPSSPQFSP 369
P SP SP SP PS + P SPSYSP+SP+Y SP++P + G SP YSP+SP +SP
Sbjct: 1560 PQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASPATPQSPGYSPTSPSYSPTSPGYSP 1619
Query: 368 -STGYSPSQPGYSPSSTSQYTP 306
S YSP+ P YSP+S S Y+P
Sbjct: 1620 ASPSYSPTSPSYSPTSPS-YSP 1640
[37][TOP]
>UniRef100_UPI0000E48671 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 3 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48671
Length = 1921
Score = 115 bits (288), Expect = 2e-24
Identities = 57/82 (69%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1703 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSS 1762
Query: 362 -GYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSP+S S Y+PQ+
Sbjct: 1763 PKYSPTSPSYSPTSPS-YSPQS 1783
Score = 114 bits (285), Expect = 4e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSPSSP++SP S
Sbjct: 1710 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTS 1769
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP S S Y+P
Sbjct: 1770 PSYSPTSPSYSPQSPS-YSP 1788
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1626 SPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1685
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1686 PSYSPTSPSYSPTSPS-YSP 1704
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1647 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1706
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1707 PSYSPTSPSYSPTSPS-YSP 1725
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1668 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1727
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1728 PSYSPTSPSYSPTSPS-YSP 1746
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1689 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1748
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSPSS +Y+P
Sbjct: 1749 PSYSPTSPSYSPSS-PKYSP 1767
Score = 112 bits (281), Expect = 1e-23
Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP+YSPTSPSYSPTSP++SPSSPTYSP+SP S SP YSPSSP++SP S
Sbjct: 1794 SPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTS 1853
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1854 PTYSPTSPKYSPASPT-YSP 1872
Score = 111 bits (278), Expect = 3e-23
Identities = 56/82 (68%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1717 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTS 1776
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP P YSP S S Y+P +
Sbjct: 1777 PSYSPQSPSYSPGSPS-YSPSS 1797
Score = 111 bits (278), Expect = 3e-23
Identities = 57/80 (71%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP+YSPTSPSYSP SPSYSP SP+YSPSSP S SP YSP+SP +SP S
Sbjct: 1759 SPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTS 1818
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
+SPS P YSP+S S Y+P
Sbjct: 1819 PNFSPSSPTYSPASPS-YSP 1837
Score = 111 bits (277), Expect = 4e-23
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1619 SPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1678
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1679 PSYSPTSPSYSPTSPS-YSP 1697
Score = 108 bits (270), Expect = 2e-22
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP SP YSP+SP YSPTSPSYSPTSPSYSP+SP +SPSSP S SP YSP+SP++SPS+
Sbjct: 1787 SPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSS 1846
Query: 362 -GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1847 PKYSPTSPTYSPTS-PKYSP 1865
Score = 107 bits (268), Expect = 4e-22
Identities = 52/74 (70%), Positives = 61/74 (82%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSP+SP YSPTSPSYSP+SP+YSP SP S SP YSPSSP++SP S
Sbjct: 1745 SPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTS 1804
Query: 365 TGYSPSQPGYSPSS 324
YSP+ P YSP+S
Sbjct: 1805 PSYSPTSPSYSPTS 1818
Score = 107 bits (267), Expect = 5e-22
Identities = 51/78 (65%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 360
P+SP +P SP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1600 PASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1659
Query: 359 YSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1660 YSPTSPSYSPTSPS-YSP 1676
Score = 106 bits (265), Expect = 9e-22
Identities = 55/92 (59%), Positives = 66/92 (71%), Gaps = 7/92 (7%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP YSP+SP YSPTSP+YSP+SP YSP+SP S SP YSPSSP +SP+
Sbjct: 1829 SPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTS 1888
Query: 365 ---TGYSPSQPGYSPSST--SQYTPQTNDKDE 285
+ YSP+ P YSP+S S +P D DE
Sbjct: 1889 PKGSTYSPTSPSYSPTSPSYSPTSPGMGDDDE 1920
Score = 105 bits (262), Expect = 2e-21
Identities = 58/82 (70%), Positives = 63/82 (76%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFS 372
SP+SP YSPTSP+YSPTSPSYSPTSPSYSPSSP YSP+SP S SP YSP SP S
Sbjct: 1731 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGS 1790
Query: 371 PSTGYSPSQPGYSPSSTSQYTP 306
PS YSPS P YSP+S S Y+P
Sbjct: 1791 PS--YSPSSPKYSPTSPS-YSP 1809
Score = 104 bits (260), Expect = 3e-21
Identities = 54/82 (65%), Positives = 62/82 (75%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP +SP+SP YSP SPSYSPTSP YSPSSP YSP+SP S SP YSP+SP +SP S
Sbjct: 1815 SPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTS 1874
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSPS P YSP+S S Y+P
Sbjct: 1875 PKYSPSSPTYSPTSPKGSTYSP 1896
Score = 104 bits (259), Expect = 5e-21
Identities = 52/83 (62%), Positives = 63/83 (75%), Gaps = 5/83 (6%)
Frame = -2
Query: 539 SPSSPY----SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 372
SP++P SPTSP+YSPTSP YSP SPSYSP+SP+YSP+SP S SP YSP+SP +S
Sbjct: 1602 SPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1661
Query: 371 P-STGYSPSQPGYSPSSTSQYTP 306
P S YSP+ P YSP+S S Y+P
Sbjct: 1662 PTSPSYSPTSPSYSPTSPS-YSP 1683
Score = 103 bits (258), Expect = 6e-21
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP SP YSP SP+YSP+SP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1780 SPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTS 1839
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS P YSP+S + Y+P
Sbjct: 1840 PKYSPSSPKYSPTSPT-YSP 1858
Score = 96.3 bits (238), Expect = 1e-18
Identities = 51/85 (60%), Positives = 60/85 (70%), Gaps = 8/85 (9%)
Frame = -2
Query: 536 PSSP-YSPTSPNY------SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
P SP YSP SP+Y +P SP YSPTSPSYSP+SP YSP+SP S SP YSP+SP
Sbjct: 1586 PMSPSYSPASPSYLPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPS 1645
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTP 306
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPS-YSP 1669
Score = 74.3 bits (181), Expect = 5e-12
Identities = 44/82 (53%), Positives = 55/82 (67%), Gaps = 8/82 (9%)
Frame = -2
Query: 527 PYSPTSPNYSPTSPSYS-PTSPSYSPSSPTY---SPSSPYNSG---VSPDYSPSSPQFSP 369
P SP SP SP PS + P SPSYSP+SP+Y SP++P + G SP YSP+SP +SP
Sbjct: 1568 PQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASPATPQSPGYSPTSPSYSPTSPGYSP 1627
Query: 368 -STGYSPSQPGYSPSSTSQYTP 306
S YSP+ P YSP+S S Y+P
Sbjct: 1628 ASPSYSPTSPSYSPTSPS-YSP 1648
[38][TOP]
>UniRef100_B9WN64 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
RepID=B9WN64_CANDC
Length = 1735
Score = 115 bits (288), Expect = 2e-24
Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1558 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1617
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ PGYSP+S S Y+P
Sbjct: 1618 PSYSPTSPGYSPTSPS-YSP 1636
Score = 114 bits (286), Expect = 3e-24
Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1621 SPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTS 1680
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1681 PSYSPTSPQYSPTSPS-YSP 1699
Score = 113 bits (282), Expect = 1e-23
Identities = 57/86 (66%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1649 SPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTS 1708
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDKD 288
YSP+ P YSP S Y P++ KD
Sbjct: 1709 PQYSPTSPRYSPGSPG-YEPKSPKKD 1733
Score = 112 bits (281), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1579 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTS 1638
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1639 PSYSPTSPSYSPTSPS-YSP 1657
Score = 112 bits (281), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1607 SPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTS 1666
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1667 PSYSPTSPQYSPTSPS-YSP 1685
Score = 111 bits (278), Expect = 3e-23
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1538 SPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1597
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1598 SYSPTSPSYSPTSPS-YSP 1615
Score = 111 bits (277), Expect = 4e-23
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1600 SPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1659
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1660 PQYSPTSPSYSPTS-PQYSP 1678
Score = 103 bits (258), Expect = 6e-21
Identities = 57/87 (65%), Positives = 67/87 (77%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP+S
Sbjct: 1628 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTS 1687
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
PQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1688 PQYSPTSPSYSPTSPQYSPTS-PQYSP 1713
Score = 103 bits (257), Expect = 8e-21
Identities = 56/82 (68%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFS 372
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP S
Sbjct: 1593 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTS 1652
Query: 371 PSTGYSPSQPGYSPSSTSQYTP 306
PS YSP+ P YSP+S S Y+P
Sbjct: 1653 PS--YSPTSPQYSPTSPS-YSP 1671
Score = 97.1 bits (240), Expect = 7e-19
Identities = 48/77 (62%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S Y+ YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1533 SPGYASPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1592
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 1593 SPTSPSYSPTSPS-YSP 1608
Score = 89.0 bits (219), Expect = 2e-16
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 6/82 (7%)
Frame = -2
Query: 533 SSPYS-----PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
+SP+S TSP Y+ YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP
Sbjct: 1521 TSPFSFGYNTATSPGYASPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1580
Query: 368 -STGYSPSQPGYSPSSTSQYTP 306
S YSP+ P YSP+S S Y+P
Sbjct: 1581 TSPSYSPTSPSYSPTSPS-YSP 1601
Score = 69.3 bits (168), Expect = 2e-10
Identities = 32/44 (72%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG 411
SP+SP YSPTSP YSPTSP YSPTSP YSP SP Y P SP G
Sbjct: 1691 SPTSPSYSPTSPQYSPTSPQYSPTSPRYSPGSPGYEPKSPKKDG 1734
[39][TOP]
>UniRef100_UPI0001796DD3 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase II subunit A) (DNA-directed RNA polymerase III
largest subunit) n=1 Tax=Equus caballus
RepID=UPI0001796DD3
Length = 1834
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1623 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1682
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1683 PSYSPTSPSYSPTSPS-YSP 1701
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1644 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1703
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1704 PSYSPTSPSYSPTSPS-YSP 1722
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1665 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1724
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1725 PSYSPTSPSYSPTSPS-YSP 1743
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1686 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1745
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S S Y+P
Sbjct: 1746 PNYSPTSPNYTPTSPS-YSP 1764
Score = 111 bits (278), Expect = 3e-23
Identities = 53/80 (66%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP+T
Sbjct: 1735 SPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTT 1794
Query: 362 -GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S Y+P
Sbjct: 1795 PSYSPTSPSYSPTSPG-YSP 1813
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1669 PSYSPTSPSYSPTSPS-YSP 1687
Score = 110 bits (274), Expect = 8e-23
Identities = 53/80 (66%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1707 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTS 1766
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S + Y+P
Sbjct: 1767 PSYSPTSPNYTPTSPN-YSP 1785
Score = 108 bits (270), Expect = 2e-22
Identities = 52/80 (65%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP+YSPTSP+Y+P+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1728 SPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTS 1787
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1788 PSYSPTTPSYSPTSPS-YSP 1806
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 95.9 bits (237), Expect = 2e-18
Identities = 45/77 (58%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSPTSP+YSPTSP+Y+PTSP+YSP+SP+YSP++P S SP YSP+SP +SP S
Sbjct: 1756 TPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTTPSYSPTSPSYSPTSPGYSPTS 1815
Query: 365 TGYSPSQPGYSPSSTSQ 315
YS + P SP + +
Sbjct: 1816 PTYSLTSPAISPDDSDE 1832
Score = 93.6 bits (231), Expect = 8e-18
Identities = 52/97 (53%), Positives = 66/97 (68%), Gaps = 13/97 (13%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP-----------SSPYNSGVSPDY 396
SP+SP YSPTSPNY+PTSPSYSPTSPSYSP+SP Y+P SP +P Y
Sbjct: 1742 SPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP----TTPSY 1797
Query: 395 SPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDKD 288
SP+SP +SP S GYSP+ P YS +S + +P +D++
Sbjct: 1798 SPTSPSYSPTSPGYSPTSPTYSLTSPA-ISPDDSDEE 1833
Score = 58.9 bits (141), Expect = 2e-07
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP +
Sbjct: 1549 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYE 1601
Query: 371 PST--GYSPSQPGYSPSSTSQYTP 306
P + GY+P P YSP+S S Y+P
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPS-YSP 1624
Score = 54.3 bits (129), Expect = 5e-06
Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPS 366
S S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S
Sbjct: 1534 SVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMS 1590
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P Y P S YTPQ+
Sbjct: 1591 PSYSPTSPAYEPRSPGGYTPQS 1612
[40][TOP]
>UniRef100_UPI0000E24648 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) n=1 Tax=Pan troglodytes RepID=UPI0000E24648
Length = 1913
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1623 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1682
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1683 PSYSPTSPSYSPTSPS-YSP 1701
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1644 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1703
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1704 PSYSPTSPSYSPTSPS-YSP 1722
Score = 112 bits (279), Expect = 2e-23
Identities = 58/95 (61%), Positives = 68/95 (71%), Gaps = 15/95 (15%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP
Sbjct: 1665 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1724
Query: 368 ------------STGYSPSQPGYSPSSTSQYTPQT 300
S YSP+ P YSPSS +YTPQ+
Sbjct: 1725 QSYHPTVVDSSTSPSYSPTSPSYSPSS-PRYTPQS 1758
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1669 PSYSPTSPSYSPTSPS-YSP 1687
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1804 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1863
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1864 PKYSPTSPTYSPTSPKGSTYSP 1885
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1762 TPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTS 1821
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1822 PTYSPTTPKYSPTSPT-YSP 1840
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1790 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1849
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1850 PKYSPTSPTYSPTS-PKYSP 1868
Score = 104 bits (260), Expect = 3e-21
Identities = 57/100 (57%), Positives = 68/100 (68%), Gaps = 22/100 (22%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-------------YNSGVSP 402
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP +S SP
Sbjct: 1679 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSQSYHPTVVDSSTSP 1738
Query: 401 DYSPSSPQFSPST--------GYSPSQPGYSPSSTSQYTP 306
YSP+SP +SPS+ Y+PS P YSPSS S Y+P
Sbjct: 1739 SYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPS-YSP 1777
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1818 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1877
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1878 PKGSTYSPTSPGYSPTS 1894
Score = 102 bits (254), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1755 TPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS 1814
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP +T +Y+P
Sbjct: 1815 PKYSPTSPTYSP-TTPKYSP 1833
Score = 99.4 bits (246), Expect = 1e-19
Identities = 47/79 (59%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
S S YSPTSP+YSP+SP Y+P SP+Y+PSSP+YSPSSP S SP Y+P+SP +SPS+
Sbjct: 1735 STSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSP 1794
Query: 362 GYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S +Y+P
Sbjct: 1795 EYTPTSPKYSPTS-PKYSP 1812
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1783 TPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS 1842
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S + Y+P
Sbjct: 1843 PVYTPTSPKYSPTSPT-YSP 1861
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 97.1 bits (240), Expect = 7e-19
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 15/93 (16%)
Frame = -2
Query: 539 SPSSP-YSPTS-------------PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP 402
SP+SP YSPTS P+YSPTSPSYSP+SP Y+P SPTY+PSSP S SP
Sbjct: 1714 SPTSPSYSPTSQSYHPTVVDSSTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1773
Query: 401 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
YSP+SP+++P S YSPS P Y+P+S +Y+P
Sbjct: 1774 SYSPTSPKYTPTSPSYSPSSPEYTPTS-PKYSP 1805
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 1832 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYS 1891
Query: 371 P-STGYSPSQPGYSPSSTSQ 315
P S YS + P SP + +
Sbjct: 1892 PTSPTYSLTSPAISPDDSDE 1911
Score = 58.9 bits (141), Expect = 2e-07
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP +
Sbjct: 1549 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYE 1601
Query: 371 PST--GYSPSQPGYSPSSTSQYTP 306
P + GY+P P YSP+S S Y+P
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPS-YSP 1624
Score = 54.3 bits (129), Expect = 5e-06
Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPS 366
S S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S
Sbjct: 1534 SVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMS 1590
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P Y P S YTPQ+
Sbjct: 1591 PSYSPTSPAYEPRSPGGYTPQS 1612
[41][TOP]
>UniRef100_UPI0000D5670C PREDICTED: similar to GA13798-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D5670C
Length = 2007
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1607 SPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1666
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1667 PSYSPTSPSYSPTSPS-YSP 1685
Score = 114 bits (286), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1670 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1729
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSPSS +YTP
Sbjct: 1730 PSYSPTSPSYSPSS-PRYTP 1748
Score = 114 bits (285), Expect = 4e-24
Identities = 58/80 (72%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSPSSP Y+P+SP S SP YSPSSPQ+SP S
Sbjct: 1712 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPASPSYSPTSPSYSPSSPQYSPAS 1771
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
+SPS P YSP+S S Y+P
Sbjct: 1772 PSFSPSSPKYSPTSPS-YSP 1790
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1628 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1687
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1688 PSYSPTSPSYSPTSPS-YSP 1706
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1649 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1708
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1709 PSYSPTSPSYSPTSPS-YSP 1727
Score = 112 bits (281), Expect = 1e-23
Identities = 57/87 (65%), Positives = 67/87 (77%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1684 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSS 1743
Query: 362 --------GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSPSS QY+P
Sbjct: 1744 PRYTPASPSYSPTSPSYSPSS-PQYSP 1769
Score = 109 bits (272), Expect = 1e-22
Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1600 TPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1659
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1660 PSYSPTSPSYSPTSPS-YSP 1678
Score = 107 bits (267), Expect = 5e-22
Identities = 49/82 (59%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP YSP SPS+SP+SP YSP+SP+YSP+SP +G SP YSP+SP +SP S
Sbjct: 1754 SPTSPSYSPSSPQYSPASPSFSPSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPTS 1813
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSPS P ++P+++S+Y+P +
Sbjct: 1814 PNYSPSSPQHTPAASSRYSPSS 1835
Score = 103 bits (257), Expect = 8e-21
Identities = 55/99 (55%), Positives = 65/99 (65%), Gaps = 16/99 (16%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
SP+SP YSP+SP Y+P SPSYSPTSPSYSPSSP YSP+SP S SP YSP+SP +SP
Sbjct: 1733 SPTSPSYSPSSPRYTPASPSYSPTSPSYSPSSPQYSPASPSFSPSSPKYSPTSPSYSPTS 1792
Query: 368 -------------STGYSPSQPGYSPSSTSQYTPQTNDK 291
S YSP+ P YSPSS Q+TP + +
Sbjct: 1793 PSFAGGSPQYSPTSPSYSPTSPNYSPSS-PQHTPAASSR 1830
Score = 102 bits (254), Expect = 2e-20
Identities = 50/79 (63%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
P+SP +P SP YSPTSP YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1594 PTSPSMTPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1653
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1654 SYSPTSPSYSPTSPS-YSP 1671
Score = 101 bits (252), Expect = 3e-20
Identities = 50/80 (62%), Positives = 60/80 (75%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP + PTSP+ +P SP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1586 SPSSPSFQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1645
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1646 PSYSPTSPSYSPTSPS-YSP 1664
Score = 100 bits (249), Expect = 7e-20
Identities = 55/87 (63%), Positives = 67/87 (77%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP +YSPSSP + SP YSP+S
Sbjct: 1698 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPASPSYSPTS 1757
Query: 383 PQFSPST-GYSPSQPGYSPSSTSQYTP 306
P +SPS+ YSP+ P +SPSS +Y+P
Sbjct: 1758 PSYSPSSPQYSPASPSFSPSS-PKYSP 1783
Score = 100 bits (249), Expect = 7e-20
Identities = 59/102 (57%), Positives = 68/102 (66%), Gaps = 24/102 (23%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYN----------- 417
SPSSP YSPTSP+YSPTSPS YSPTSPSYSP+SP YSPSSP +
Sbjct: 1775 SPSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPTSPNYSPSSPQHTPAASSRYSPS 1834
Query: 416 ----SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SPQ+SP ST YSP+ P Y+P+S S Y+P
Sbjct: 1835 SPNYSPSSPSYSPTSPQYSPHSTKYSPTSPTYTPTSPS-YSP 1875
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YSP+SP++ PTSPS +P SP YSP+SP YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1582 SPSYSPSSPSFQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSY 1641
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 1642 SPTSPSYSPTSPS-YSP 1657
Score = 96.3 bits (238), Expect = 1e-18
Identities = 47/77 (61%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGY 357
SS YSP+SPNYSP+SPSYSPTSP YSP S YSP+SP + SP YSP+SP +S Y
Sbjct: 1828 SSRYSPSSPNYSPSSPSYSPTSPQYSPHSTKYSPTSPTYTPTSPSYSPASPAYSSQPPRY 1887
Query: 356 SPSQPGYSPSSTSQYTP 306
SPS P YSP+S P
Sbjct: 1888 SPSSPSYSPTSPITLPP 1904
Score = 93.6 bits (231), Expect = 8e-18
Identities = 54/93 (58%), Positives = 64/93 (68%), Gaps = 13/93 (13%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGVSPDYSPSSPQF 375
SP+SP +SP+SP YSPTSPSYSPTSPS++ SP YSP SP SP+YSPSSPQ
Sbjct: 1768 SPASPSFSPSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSP----TSPNYSPSSPQH 1823
Query: 374 SP--STGYSPSQPGYSPSSTS------QYTPQT 300
+P S+ YSPS P YSPSS S QY+P +
Sbjct: 1824 TPAASSRYSPSSPNYSPSSPSYSPTSPQYSPHS 1856
Score = 93.2 bits (230), Expect = 1e-17
Identities = 50/84 (59%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SPSSP YSPTSP YSP S YSPTSP+Y+P+SP+YSP+SP S P YSPSSP +SP++
Sbjct: 1839 SPSSPSYSPTSPQYSPHSTKYSPTSPTYTPTSPSYSPASPAYSSQPPRYSPSSPSYSPTS 1898
Query: 362 GYS-PSQPGYSPSSTSQYTPQTND 294
+ P P YS SS S YT + D
Sbjct: 1899 PITLPPSPYYSRSS-STYTFSSRD 1921
Score = 78.6 bits (192), Expect = 3e-13
Identities = 42/80 (52%), Positives = 53/80 (66%), Gaps = 8/80 (10%)
Frame = -2
Query: 521 SPTSPNYSP-------TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP SP SPSYSP+SPS+ P+SP+ +P SP S SP YSP+SP +SP S
Sbjct: 1565 TPQSPAMSPFMASPHGQSPSYSPSSPSFQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTS 1624
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1625 PSYSPTSPSYSPTSPS-YSP 1643
Score = 69.7 bits (169), Expect = 1e-10
Identities = 45/99 (45%), Positives = 56/99 (56%), Gaps = 24/99 (24%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYS-------PTSPSYSPSSPTYSPSSPYNSGVSP------ 402
SP+SP Y+PTSP+YSP SP+YS P+SPSYSP+SP P SPY S S
Sbjct: 1860 SPTSPTYTPTSPSYSPASPAYSSQPPRYSPSSPSYSPTSPITLPPSPYYSRSSSTYTFSS 1919
Query: 401 -DYSPSSPQFSP---------STGYSPSQPGYSPSSTSQ 315
DY+ SSP +SP S YSP+ P Y S ++
Sbjct: 1920 RDYTYSSPPYSPTIPQDEMFTSPVYSPTIPKYFRSDINR 1958
Score = 62.4 bits (150), Expect = 2e-08
Identities = 39/91 (42%), Positives = 47/91 (51%), Gaps = 16/91 (17%)
Frame = -2
Query: 530 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 375
S +P P +SP+ SP Y SP+ P SP SP G SP YSPSSP F
Sbjct: 1535 SGMTPGGPAFSPSAASDASGMSPGYGAWSPT--PQSPAMSPFMASPHGQSPSYSPSSPSF 1592
Query: 374 SP--------STGYSPSQPGYSPSSTSQYTP 306
P S GYSP+ PGYSP+S + Y+P
Sbjct: 1593 QPTSPSMTPVSPGYSPTSPGYSPTSPN-YSP 1622
[42][TOP]
>UniRef100_UPI00005A0B2C PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 23 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2C
Length = 1888
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1622 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1681
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1682 PSYSPTSPSYSPTSPS-YSP 1700
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1643 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1702
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1703 PSYSPTSPSYSPTSPS-YSP 1721
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1664 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1723
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1724 PSYSPTSPSYSPTSPS-YSP 1742
Score = 112 bits (281), Expect = 1e-23
Identities = 56/83 (67%), Positives = 67/83 (80%), Gaps = 5/83 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1692 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSS 1751
Query: 362 ----GYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSPSS +YTP
Sbjct: 1752 PTSPKYTPTSPSYSPSS-PEYTP 1773
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1608 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1667
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1668 PSYSPTSPSYSPTSPS-YSP 1686
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1601 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1660
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1661 PSYSPTSPSYSPTSPS-YSP 1679
Score = 106 bits (265), Expect = 9e-22
Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 5/83 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN---SGVSPDYSPSSPQFS 372
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPSSP + + SP YSPSSP+++
Sbjct: 1713 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEYT 1772
Query: 371 P-STGYSPSQPGYSPSSTSQYTP 306
P S YSP+ P YSP+S +Y+P
Sbjct: 1773 PTSPKYSPTSPKYSPTS-PKYSP 1794
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1779 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1838
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1839 PKYSPTSPTYSPTSPKGSTYSP 1860
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1765 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1824
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1825 PKYSPTSPTYSPTS-PKYSP 1843
Score = 104 bits (259), Expect = 5e-21
Identities = 53/83 (63%), Positives = 68/83 (81%), Gaps = 5/83 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY---NSGVSPDYSPSSPQFS 372
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP +S SP Y+P+SP +S
Sbjct: 1706 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYS 1765
Query: 371 PST-GYSPSQPGYSPSSTSQYTP 306
PS+ Y+P+ P YSP+S +Y+P
Sbjct: 1766 PSSPEYTPTSPKYSPTS-PKYSP 1787
Score = 103 bits (256), Expect = 1e-20
Identities = 54/83 (65%), Positives = 65/83 (78%), Gaps = 5/83 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSP---TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 372
SP+SP YSPTSPNYSP TSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++S
Sbjct: 1734 SPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYS 1793
Query: 371 P-STGYSPSQPGYSPSSTSQYTP 306
P S YSP+ P YSP+S + Y+P
Sbjct: 1794 PTSPTYSPTTPKYSPTSPT-YSP 1815
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1793 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1852
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1853 PKGSTYSPTSPGYSPTS 1869
Score = 101 bits (252), Expect = 3e-20
Identities = 52/83 (62%), Positives = 66/83 (79%), Gaps = 5/83 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSY---SPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 372
SP+SP YSPTSP+YSPTSP+Y SPTSP Y+P+SP+YSPSSP + SP YSP+SP++S
Sbjct: 1727 SPTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYS 1786
Query: 371 P-STGYSPSQPGYSPSSTSQYTP 306
P S YSP+ P YSP +T +Y+P
Sbjct: 1787 PTSPKYSPTSPTYSP-TTPKYSP 1808
Score = 101 bits (251), Expect = 4e-20
Identities = 49/76 (64%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYS 354
SP SPTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP YSP+SP +SP+T YS
Sbjct: 1748 SPSSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYS 1807
Query: 353 PSQPGYSPSSTSQYTP 306
P+ P YSP+S YTP
Sbjct: 1808 PTSPTYSPTS-PVYTP 1822
Score = 100 bits (248), Expect = 9e-20
Identities = 48/80 (60%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP Y+PTSP+YSP+SP Y+PTSP YSP+SP YSP+SP S SP YSP++P++SP S
Sbjct: 1751 SPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1810
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S +Y+P
Sbjct: 1811 PTYSPTSPVYTPTS-PKYSP 1829
Score = 99.4 bits (246), Expect = 1e-19
Identities = 55/85 (64%), Positives = 64/85 (75%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP---TYSPSSPYNSGVSPDYSPSSPQFS 372
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP P+SP S SP YSP+SP +S
Sbjct: 1678 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS---PTSPSYSPTSPSYSPTSPSYS 1734
Query: 371 P-STGYSPSQPGYSPSS--TSQYTP 306
P S YSP+ P YSPSS + +YTP
Sbjct: 1735 PTSPSYSPTSPNYSPSSPTSPKYTP 1759
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1576 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1635
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1636 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1672
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 1807 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYS 1866
Query: 371 P-STGYSPSQPGYSPSSTSQ 315
P S YS + P SP + +
Sbjct: 1867 PTSPTYSLTSPAISPDDSDE 1886
Score = 58.9 bits (141), Expect = 2e-07
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP +
Sbjct: 1548 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYE 1600
Query: 371 PST--GYSPSQPGYSPSSTSQYTP 306
P + GY+P P YSP+S S Y+P
Sbjct: 1601 PRSPGGYTPQSPSYSPTSPS-YSP 1623
Score = 53.5 bits (127), Expect = 9e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1536 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1592
Query: 356 SPSQPGYSPSSTSQYTPQT 300
SP+ P Y P S YTPQ+
Sbjct: 1593 SPTSPAYEPRSPGGYTPQS 1611
[43][TOP]
>UniRef100_UPI00005A0B2B PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 22 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2B
Length = 1892
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1608 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1667
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1668 PSYSPTSPSYSPTSPS-YSP 1686
Score = 113 bits (283), Expect = 8e-24
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1671 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1730
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS+P Y+P+S S Y+P
Sbjct: 1731 PNYSPSRPNYTPTSPS-YSP 1749
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1629 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1688
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1689 PSYSPTSPSYSPTSPS-YSP 1707
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1650 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1709
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1710 PSYSPTSPSYSPTSPS-YSP 1728
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1657 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1716
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1717 PSYSPTSPSYSPTSPN-YSP 1735
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1678 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSR 1737
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1738 PNYTPTSPSYSPTSPS-YSP 1756
Score = 110 bits (276), Expect = 5e-23
Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1699 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTS 1758
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSPSS +YTP
Sbjct: 1759 PKYTPTSPSYSPSS-PEYTP 1777
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1594 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1653
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1654 PSYSPTSPSYSPTSPS-YSP 1672
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1587 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1646
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1647 PSYSPTSPSYSPTSPS-YSP 1665
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1783 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1842
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1843 PKYSPTSPTYSPTSPKGSTYSP 1864
Score = 106 bits (264), Expect = 1e-21
Identities = 51/80 (63%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1720 SPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTS 1779
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1780 PKYSPTSPKYSPTS-PKYSP 1798
Score = 105 bits (262), Expect = 2e-21
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSPTSP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1741 TPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTS 1800
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1801 PTYSPTTPKYSPTSPT-YSP 1819
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1769 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1828
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1829 PKYSPTSPTYSPTS-PKYSP 1847
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1797 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1856
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1857 PKGSTYSPTSPGYSPTS 1873
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1762 TPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS 1821
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S + Y+P
Sbjct: 1822 PVYTPTSPKYSPTSPT-YSP 1840
Score = 97.1 bits (240), Expect = 7e-19
Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
SP+SP YSP+ PNY+PTSPSYSPTSPSYSP+SP +YSPSSP + SP YSP+S
Sbjct: 1727 SPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS 1786
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P++SP S YSP+ P YSP +T +Y+P
Sbjct: 1787 PKYSPTSPKYSPTSPTYSP-TTPKYSP 1812
Score = 96.7 bits (239), Expect = 9e-19
Identities = 52/94 (55%), Positives = 61/94 (64%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYNSGVS 405
SP SP SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP S S
Sbjct: 1566 SPGSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1625
Query: 404 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
P YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1626 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1658
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 1811 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYS 1870
Query: 371 P-STGYSPSQPGYSPSSTSQ 315
P S YS + P SP + +
Sbjct: 1871 PTSPTYSLTSPAISPDDSDE 1890
Score = 57.8 bits (138), Expect = 5e-07
Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTY-SPSSPYNSGVSPDYSPSSPQFSP 369
S S +P + +SP++ S S SP YSP+ SPT SP SP +SP YSP+SP + P
Sbjct: 1529 SVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSP-GGAMSPSYSPTSPAYEP 1587
Query: 368 ST--GYSPSQPGYSPSSTSQYTP 306
+ GY+P P YSP+S S Y+P
Sbjct: 1588 RSPGGYTPQSPSYSPTSPS-YSP 1609
[44][TOP]
>UniRef100_UPI00005A0B2A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 21 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2A
Length = 1896
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1612 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1671
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1672 PSYSPTSPSYSPTSPS-YSP 1690
Score = 113 bits (283), Expect = 8e-24
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1675 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1734
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS+P Y+P+S S Y+P
Sbjct: 1735 PNYSPSRPNYTPTSPS-YSP 1753
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1633 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1692
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1693 PSYSPTSPSYSPTSPS-YSP 1711
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1654 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1713
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1714 PSYSPTSPSYSPTSPS-YSP 1732
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1661 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1720
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1721 PSYSPTSPSYSPTSPN-YSP 1739
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1682 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSR 1741
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1742 PNYTPTSPSYSPTSPS-YSP 1760
Score = 110 bits (276), Expect = 5e-23
Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1703 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTS 1762
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSPSS +YTP
Sbjct: 1763 PKYTPTSPSYSPSS-PEYTP 1781
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1598 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1657
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1658 PSYSPTSPSYSPTSPS-YSP 1676
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1591 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1650
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1651 PSYSPTSPSYSPTSPS-YSP 1669
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1787 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1846
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1847 PKYSPTSPTYSPTSPKGSTYSP 1868
Score = 106 bits (264), Expect = 1e-21
Identities = 51/80 (63%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1724 SPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTS 1783
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1784 PKYSPTSPKYSPTS-PKYSP 1802
Score = 105 bits (262), Expect = 2e-21
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSPTSP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1745 TPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTS 1804
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1805 PTYSPTTPKYSPTSPT-YSP 1823
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1773 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1832
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1833 PKYSPTSPTYSPTS-PKYSP 1851
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1801 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1860
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1861 PKGSTYSPTSPGYSPTS 1877
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1766 TPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS 1825
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S + Y+P
Sbjct: 1826 PVYTPTSPKYSPTSPT-YSP 1844
Score = 97.1 bits (240), Expect = 7e-19
Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
SP+SP YSP+ PNY+PTSPSYSPTSPSYSP+SP +YSPSSP + SP YSP+S
Sbjct: 1731 SPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS 1790
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P++SP S YSP+ P YSP +T +Y+P
Sbjct: 1791 PKYSPTSPKYSPTSPTYSP-TTPKYSP 1816
Score = 96.7 bits (239), Expect = 9e-19
Identities = 52/94 (55%), Positives = 61/94 (64%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYNSGVS 405
SP SP SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP S S
Sbjct: 1570 SPGSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1629
Query: 404 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
P YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1630 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1662
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 1815 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYS 1874
Query: 371 P-STGYSPSQPGYSPSSTSQ 315
P S YS + P SP + +
Sbjct: 1875 PTSPTYSLTSPAISPDDSDE 1894
Score = 60.8 bits (146), Expect = 6e-08
Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTY-SPSSPYNSGVSPDYSPSSPQFSP 369
SP S +P + +SP++ S S SP YSP+ SPT SP SP +SP YSP+SP + P
Sbjct: 1533 SPRSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSP-GGAMSPSYSPTSPAYEP 1591
Query: 368 ST--GYSPSQPGYSPSSTSQYTP 306
+ GY+P P YSP+S S Y+P
Sbjct: 1592 RSPGGYTPQSPSYSPTSPS-YSP 1613
[45][TOP]
>UniRef100_UPI00005A0B29 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 20 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B29
Length = 1891
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1591 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1650
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1651 PSYSPTSPSYSPTSPS-YSP 1669
Score = 113 bits (283), Expect = 8e-24
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1654 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1713
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS+P Y+P+S S Y+P
Sbjct: 1714 PNYSPSRPNYTPTSPS-YSP 1732
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1612 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1671
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1672 PSYSPTSPSYSPTSPS-YSP 1690
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1633 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1692
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1693 PSYSPTSPSYSPTSPS-YSP 1711
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1640 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1699
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1700 PSYSPTSPSYSPTSPN-YSP 1718
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1661 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSR 1720
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1721 PNYTPTSPSYSPTSPS-YSP 1739
Score = 111 bits (277), Expect = 4e-23
Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 3/81 (3%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1682 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTS 1741
Query: 365 TGYSPSQPGYSPSSTS-QYTP 306
Y+P P YSP+ TS +YTP
Sbjct: 1742 PNYTPMSPNYSPTPTSPKYTP 1762
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1577 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1636
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1637 PSYSPTSPSYSPTSPS-YSP 1655
Score = 107 bits (266), Expect = 7e-22
Identities = 52/85 (61%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S P+Y+P+SP +SP S
Sbjct: 1675 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTS 1734
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDK 291
YSP+ P Y+P S + T+ K
Sbjct: 1735 PSYSPTSPNYTPMSPNYSPTPTSPK 1759
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1570 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1629
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1630 PSYSPTSPSYSPTSPS-YSP 1648
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1782 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1841
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1842 PKYSPTSPTYSPTSPKGSTYSP 1863
Score = 105 bits (261), Expect = 3e-21
Identities = 53/89 (59%), Positives = 64/89 (71%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
SP+SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP YSP+SP ++P
Sbjct: 1689 SPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMS 1748
Query: 368 --------STGYSPSQPGYSPSSTSQYTP 306
S Y+P+ P YSPSS +YTP
Sbjct: 1749 PNYSPTPTSPKYTPTSPSYSPSS-PEYTP 1776
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1768 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1827
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1828 PKYSPTSPTYSPTS-PKYSP 1846
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1796 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1855
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1856 PKGSTYSPTSPGYSPTS 1872
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/79 (60%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
SP+ +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP YSP+SP +SP+T
Sbjct: 1748 SPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1807
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S YTP
Sbjct: 1808 KYSPTSPTYSPTS-PVYTP 1825
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1545 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1604
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1605 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1641
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 1810 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYS 1869
Query: 371 P-STGYSPSQPGYSPSSTSQ 315
P S YS + P SP + +
Sbjct: 1870 PTSPTYSLTSPAISPDDSDE 1889
Score = 58.9 bits (141), Expect = 2e-07
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP +
Sbjct: 1517 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYE 1569
Query: 371 PST--GYSPSQPGYSPSSTSQYTP 306
P + GY+P P YSP+S S Y+P
Sbjct: 1570 PRSPGGYTPQSPSYSPTSPS-YSP 1592
Score = 53.5 bits (127), Expect = 9e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1505 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1561
Query: 356 SPSQPGYSPSSTSQYTPQT 300
SP+ P Y P S YTPQ+
Sbjct: 1562 SPTSPAYEPRSPGGYTPQS 1580
[46][TOP]
>UniRef100_UPI00005A0B28 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 19 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B28
Length = 1908
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1608 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1667
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1668 PSYSPTSPSYSPTSPS-YSP 1686
Score = 113 bits (283), Expect = 8e-24
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1671 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1730
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS+P Y+P+S S Y+P
Sbjct: 1731 PNYSPSRPNYTPTSPS-YSP 1749
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1629 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1688
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1689 PSYSPTSPSYSPTSPS-YSP 1707
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1650 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1709
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1710 PSYSPTSPSYSPTSPS-YSP 1728
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1657 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1716
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1717 PSYSPTSPSYSPTSPN-YSP 1735
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1678 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSR 1737
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1738 PNYTPTSPSYSPTSPS-YSP 1756
Score = 111 bits (277), Expect = 4e-23
Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 3/81 (3%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1699 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTS 1758
Query: 365 TGYSPSQPGYSPSSTS-QYTP 306
Y+P P YSP+ TS +YTP
Sbjct: 1759 PNYTPMSPNYSPTPTSPKYTP 1779
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1594 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1653
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1654 PSYSPTSPSYSPTSPS-YSP 1672
Score = 107 bits (266), Expect = 7e-22
Identities = 52/85 (61%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S P+Y+P+SP +SP S
Sbjct: 1692 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTS 1751
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDK 291
YSP+ P Y+P S + T+ K
Sbjct: 1752 PSYSPTSPNYTPMSPNYSPTPTSPK 1776
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1587 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1646
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1647 PSYSPTSPSYSPTSPS-YSP 1665
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1799 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1858
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1859 PKYSPTSPTYSPTSPKGSTYSP 1880
Score = 105 bits (261), Expect = 3e-21
Identities = 53/89 (59%), Positives = 64/89 (71%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
SP+SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP YSP+SP ++P
Sbjct: 1706 SPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMS 1765
Query: 368 --------STGYSPSQPGYSPSSTSQYTP 306
S Y+P+ P YSPSS +YTP
Sbjct: 1766 PNYSPTPTSPKYTPTSPSYSPSS-PEYTP 1793
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1785 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1844
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1845 PKYSPTSPTYSPTS-PKYSP 1863
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1813 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1872
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1873 PKGSTYSPTSPGYSPTS 1889
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/79 (60%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
SP+ +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP YSP+SP +SP+T
Sbjct: 1765 SPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1824
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S YTP
Sbjct: 1825 KYSPTSPTYSPTS-PVYTP 1842
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1562 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1621
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1622 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1658
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 1827 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYS 1886
Query: 371 P-STGYSPSQPGYSPSSTSQ 315
P S YS + P SP + +
Sbjct: 1887 PTSPTYSLTSPAISPDDSDE 1906
Score = 58.9 bits (141), Expect = 2e-07
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP +
Sbjct: 1534 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYE 1586
Query: 371 PST--GYSPSQPGYSPSSTSQYTP 306
P + GY+P P YSP+S S Y+P
Sbjct: 1587 PRSPGGYTPQSPSYSPTSPS-YSP 1609
Score = 53.5 bits (127), Expect = 9e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1522 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1578
Query: 356 SPSQPGYSPSSTSQYTPQT 300
SP+ P Y P S YTPQ+
Sbjct: 1579 SPTSPAYEPRSPGGYTPQS 1597
[47][TOP]
>UniRef100_UPI00005A0B27 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 18 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B27
Length = 1831
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1541 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1600
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1601 PSYSPTSPSYSPTSPS-YSP 1619
Score = 113 bits (283), Expect = 8e-24
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1604 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1663
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS+P Y+P+S S Y+P
Sbjct: 1664 PNYSPSRPNYTPTSPS-YSP 1682
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1562 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1621
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1622 PSYSPTSPSYSPTSPS-YSP 1640
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1583 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1642
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1643 PSYSPTSPSYSPTSPS-YSP 1661
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1590 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1649
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1650 PSYSPTSPSYSPTSPN-YSP 1668
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1611 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSR 1670
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1671 PNYTPTSPSYSPTSPS-YSP 1689
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1527 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1586
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1587 PSYSPTSPSYSPTSPS-YSP 1605
Score = 108 bits (270), Expect = 2e-22
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1632 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTS 1691
Query: 365 TGYSPSQPGYSPS-----STSQYTP 306
Y+P P YSP+ S+ +YTP
Sbjct: 1692 PNYTPMSPNYSPTPSYSPSSPEYTP 1716
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1520 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1579
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1580 PSYSPTSPSYSPTSPS-YSP 1598
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1722 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1781
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1782 PKYSPTSPTYSPTSPKGSTYSP 1803
Score = 106 bits (264), Expect = 1e-21
Identities = 48/79 (60%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSP+YSP+ P+Y+P+SP+YSP+SP S SP+Y+P SP +SP+
Sbjct: 1646 SPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTP 1705
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSPS P Y+P+S +Y+P
Sbjct: 1706 SYSPSSPEYTPTS-PKYSP 1723
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1736 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1795
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1796 PKGSTYSPTSPGYSPTS 1812
Score = 100 bits (249), Expect = 7e-20
Identities = 51/86 (59%), Positives = 66/86 (76%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSP 381
SP+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP N +P YSPSSP
Sbjct: 1653 SPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPSYSPSSP 1712
Query: 380 QFSP-STGYSPSQPGYSPSSTSQYTP 306
+++P S YSP+ P YSP+S +Y+P
Sbjct: 1713 EYTPTSPKYSPTSPKYSPTS-PKYSP 1737
Score = 100 bits (249), Expect = 7e-20
Identities = 51/82 (62%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPS P Y+PTSP+YSPTSPSYSPTSP+Y+P SP YSP+ Y S SP+Y+P+SP++SP S
Sbjct: 1667 SPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPSY-SPSSPEYTPTSPKYSPTS 1725
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSP+S + Y+P T
Sbjct: 1726 PKYSPTSPKYSPTSPT-YSPTT 1746
Score = 99.8 bits (247), Expect = 1e-19
Identities = 47/79 (59%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
SP+ YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1702 SPTPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP 1761
Query: 362 GYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S + Y+P
Sbjct: 1762 VYTPTSPKYSPTSPT-YSP 1779
Score = 94.7 bits (234), Expect = 4e-18
Identities = 49/86 (56%), Positives = 63/86 (73%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPT------SPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 381
SP+SP Y+P SPNYSPT SP Y+PTSP YSP+SP YSP+SP S SP YSP++P
Sbjct: 1688 SPTSPNYTPMSPNYSPTPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1747
Query: 380 QFSP-STGYSPSQPGYSPSSTSQYTP 306
++SP S YSP+ P Y+P+S +Y+P
Sbjct: 1748 KYSPTSPTYSPTSPVYTPTS-PKYSP 1772
Score = 91.3 bits (225), Expect = 4e-17
Identities = 49/94 (52%), Positives = 60/94 (63%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYNSGVS 405
+P + SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP S S
Sbjct: 1499 TPGAAGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1558
Query: 404 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
P YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1559 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1591
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 1750 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYS 1809
Query: 371 P-STGYSPSQPGYSPSSTSQ 315
P S YS + P SP + +
Sbjct: 1810 PTSPTYSLTSPAISPDDSDE 1829
Score = 88.6 bits (218), Expect = 3e-16
Identities = 50/84 (59%), Positives = 62/84 (73%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPS-SPYSPTS----PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 375
SPS SP SP+ PNY+P SP+YSPT PSYSPSSP Y+P+SP S SP YSP+SP++
Sbjct: 1677 SPSYSPTSPSYSPTSPNYTPMSPNYSPT-PSYSPSSPEYTPTSPKYSPTSPKYSPTSPKY 1735
Query: 374 SP-STGYSPSQPGYSPSSTSQYTP 306
SP S YSP+ P YSP+S + Y+P
Sbjct: 1736 SPTSPTYSPTTPKYSPTSPT-YSP 1758
[48][TOP]
>UniRef100_UPI00005A0B26 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 17 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B26
Length = 1684
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1518 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1577
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1578 PSYSPTSPSYSPTSPS-YSP 1596
Score = 113 bits (283), Expect = 8e-24
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1581 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1640
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS+P Y+P+S S Y+P
Sbjct: 1641 PNYSPSRPNYTPTSPS-YSP 1659
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1539 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1598
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1599 PSYSPTSPSYSPTSPS-YSP 1617
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1560 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1619
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1620 PSYSPTSPSYSPTSPS-YSP 1638
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1567 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1626
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1627 PSYSPTSPSYSPTSPN-YSP 1645
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1588 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSR 1647
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1648 PNYTPTSPSYSPTSPS-YSP 1666
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1504 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1563
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1564 PSYSPTSPSYSPTSPS-YSP 1582
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1497 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1556
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1557 PSYSPTSPSYSPTSPS-YSP 1575
Score = 106 bits (265), Expect = 9e-22
Identities = 51/74 (68%), Positives = 59/74 (79%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1609 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTS 1668
Query: 365 TGYSPSQPGYSPSS 324
Y+P P YSP+S
Sbjct: 1669 PNYTPMSPNYSPTS 1682
Score = 95.5 bits (236), Expect = 2e-18
Identities = 52/87 (59%), Positives = 65/87 (74%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S P+Y+P+S
Sbjct: 1595 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTS 1654
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P +SP S YSP+ P Y+P S + Y+P
Sbjct: 1655 PSYSPTSPSYSPTSPNYTPMSPN-YSP 1680
Score = 85.9 bits (211), Expect = 2e-15
Identities = 38/54 (70%), Positives = 49/54 (90%), Gaps = 1/54 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 381
SP+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + +SP+YSP+SP
Sbjct: 1630 SPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1683
Score = 76.6 bits (187), Expect = 1e-12
Identities = 40/72 (55%), Positives = 50/72 (69%), Gaps = 9/72 (12%)
Frame = -2
Query: 494 TSPSYS--------PTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP 342
TSP+Y P SPSYSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P
Sbjct: 1491 TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1550
Query: 341 GYSPSSTSQYTP 306
YSP+S S Y+P
Sbjct: 1551 SYSPTSPS-YSP 1561
[49][TOP]
>UniRef100_UPI00005A0B25 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 16 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B25
Length = 1752
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1518 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1577
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1578 PSYSPTSPSYSPTSPS-YSP 1596
Score = 113 bits (283), Expect = 8e-24
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1581 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1640
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS+P Y+P+S S Y+P
Sbjct: 1641 PNYSPSRPNYTPTSPS-YSP 1659
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1539 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1598
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1599 PSYSPTSPSYSPTSPS-YSP 1617
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1560 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1619
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1620 PSYSPTSPSYSPTSPS-YSP 1638
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1567 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1626
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1627 PSYSPTSPSYSPTSPN-YSP 1645
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1588 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSR 1647
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1648 PNYTPTSPSYSPTSPS-YSP 1666
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1504 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1563
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1564 PSYSPTSPSYSPTSPS-YSP 1582
Score = 109 bits (272), Expect = 1e-22
Identities = 54/83 (65%), Positives = 66/83 (79%), Gaps = 5/83 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP++
Sbjct: 1609 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTS 1668
Query: 362 ---GYSPSQPGYSPSSTS-QYTP 306
YSPS P YSP+S + +Y+P
Sbjct: 1669 PNYTYSPSSPSYSPTSPNPKYSP 1691
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1497 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1556
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1557 PSYSPTSPSYSPTSPS-YSP 1575
Score = 106 bits (264), Expect = 1e-21
Identities = 55/87 (63%), Positives = 65/87 (74%), Gaps = 4/87 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S P+Y+P+SP +SP S
Sbjct: 1602 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTS 1661
Query: 365 TGYSPSQPGY--SPSSTSQYTPQTNDK 291
YSP+ P Y SPSS S N K
Sbjct: 1662 PSYSPTSPNYTYSPSSPSYSPTSPNPK 1688
Score = 96.3 bits (238), Expect = 1e-18
Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP--YNSGVSPDYSPSSPQ--- 378
SP+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP S SP YSP+SP
Sbjct: 1630 SPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSPNPKY 1689
Query: 377 --FSPSTGYSPSQPGYSPSSTSQYTP 306
SP+ YSP+ P YSP+S + Y+P
Sbjct: 1690 SPTSPNPTYSPTSPKYSPTSPT-YSP 1714
Score = 96.3 bits (238), Expect = 1e-18
Identities = 56/88 (63%), Positives = 66/88 (75%), Gaps = 10/88 (11%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPD--YSPSSPQ- 378
SP+SP YSP+ PNY+PTSPSYSPTSPSYSP+SP TYSPSSP S SP+ YSP+SP
Sbjct: 1637 SPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSPNPKYSPTSPNP 1696
Query: 377 -FSP-STGYSPSQPGYSPSST--SQYTP 306
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1697 TYSPTSPKYSPTSPTYSPTSPKGSTYSP 1724
Score = 91.7 bits (226), Expect = 3e-17
Identities = 52/79 (65%), Positives = 61/79 (77%), Gaps = 7/79 (8%)
Frame = -2
Query: 539 SPSSP-YSPTSPNY--SPTSPSYSPTSPS--YSPSSP--TYSPSSPYNSGVSPDYSPSSP 381
SP+SP YSPTSPNY SP+SPSYSPTSP+ YSP+SP TYSP+SP S SP YSP+SP
Sbjct: 1658 SPTSPSYSPTSPNYTYSPSSPSYSPTSPNPKYSPTSPNPTYSPTSPKYSPTSPTYSPTSP 1717
Query: 380 QFSPSTGYSPSQPGYSPSS 324
+ S YSP+ PGYSP+S
Sbjct: 1718 KGST---YSPTSPGYSPTS 1733
Score = 84.7 bits (208), Expect = 4e-15
Identities = 49/81 (60%), Positives = 57/81 (70%), Gaps = 6/81 (7%)
Frame = -2
Query: 539 SPSSP-YSPTSPN--YSPTSPS--YSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 375
SPSSP YSPTSPN YSPTSP+ YSPTSP YSP+SPTYSP+SP S YSP+SP +
Sbjct: 1674 SPSSPSYSPTSPNPKYSPTSPNPTYSPTSPKYSPTSPTYSPTSPKGS----TYSPTSPGY 1729
Query: 374 SP-STGYSPSQPGYSPSSTSQ 315
SP S YS + P SP + +
Sbjct: 1730 SPTSPTYSLTSPAISPDDSDE 1750
Score = 76.6 bits (187), Expect = 1e-12
Identities = 40/72 (55%), Positives = 50/72 (69%), Gaps = 9/72 (12%)
Frame = -2
Query: 494 TSPSYS--------PTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQP 342
TSP+Y P SPSYSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P
Sbjct: 1491 TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1550
Query: 341 GYSPSSTSQYTP 306
YSP+S S Y+P
Sbjct: 1551 SYSPTSPS-YSP 1561
[50][TOP]
>UniRef100_UPI00005A0B24 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 15 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B24
Length = 1924
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1624 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1683
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1684 PSYSPTSPSYSPTSPS-YSP 1702
Score = 113 bits (283), Expect = 8e-24
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1687 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1746
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS+P Y+P+S S Y+P
Sbjct: 1747 PNYSPSRPNYTPTSPS-YSP 1765
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1645 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1704
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1705 PSYSPTSPSYSPTSPS-YSP 1723
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1666 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1725
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1726 PSYSPTSPSYSPTSPS-YSP 1744
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1673 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1732
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1733 PSYSPTSPSYSPTSPN-YSP 1751
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1694 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSR 1753
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1754 PNYTPTSPSYSPTSPS-YSP 1772
Score = 111 bits (277), Expect = 4e-23
Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 3/81 (3%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1715 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTS 1774
Query: 365 TGYSPSQPGYSPSSTS-QYTP 306
Y+P P YSP+ TS +YTP
Sbjct: 1775 PNYTPMSPNYSPTPTSPKYTP 1795
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1610 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1669
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1670 PSYSPTSPSYSPTSPS-YSP 1688
Score = 107 bits (266), Expect = 7e-22
Identities = 52/85 (61%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S P+Y+P+SP +SP S
Sbjct: 1708 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTS 1767
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDK 291
YSP+ P Y+P S + T+ K
Sbjct: 1768 PSYSPTSPNYTPMSPNYSPTPTSPK 1792
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1603 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1662
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1663 PSYSPTSPSYSPTSPS-YSP 1681
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1815 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1874
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1875 PKYSPTSPTYSPTSPKGSTYSP 1896
Score = 105 bits (261), Expect = 3e-21
Identities = 53/89 (59%), Positives = 64/89 (71%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
SP+SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP YSP+SP ++P
Sbjct: 1722 SPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMS 1781
Query: 368 --------STGYSPSQPGYSPSSTSQYTP 306
S Y+P+ P YSPSS +YTP
Sbjct: 1782 PNYSPTPTSPKYTPTSPSYSPSS-PEYTP 1809
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1801 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1860
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1861 PKYSPTSPTYSPTS-PKYSP 1879
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1829 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1888
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1889 PKGSTYSPTSPGYSPTS 1905
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/79 (60%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
SP+ +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP YSP+SP +SP+T
Sbjct: 1781 SPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1840
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S YTP
Sbjct: 1841 KYSPTSPTYSPTS-PVYTP 1858
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1578 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1637
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1638 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1674
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 1843 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYS 1902
Query: 371 P-STGYSPSQPGYSPSSTSQ 315
P S YS + P SP + +
Sbjct: 1903 PTSPTYSLTSPAISPDDSDE 1922
Score = 58.9 bits (141), Expect = 2e-07
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP +
Sbjct: 1550 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYE 1602
Query: 371 PST--GYSPSQPGYSPSSTSQYTP 306
P + GY+P P YSP+S S Y+P
Sbjct: 1603 PRSPGGYTPQSPSYSPTSPS-YSP 1625
Score = 53.5 bits (127), Expect = 9e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1538 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1594
Query: 356 SPSQPGYSPSSTSQYTPQT 300
SP+ P Y P S YTPQ+
Sbjct: 1595 SPTSPAYEPRSPGGYTPQS 1613
[51][TOP]
>UniRef100_UPI00005A0B23 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 14 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B23
Length = 1653
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1487 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1546
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1547 PSYSPTSPSYSPTSPS-YSP 1565
Score = 113 bits (283), Expect = 8e-24
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1550 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1609
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS+P Y+P+S S Y+P
Sbjct: 1610 PNYSPSRPNYTPTSPS-YSP 1628
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1508 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1567
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1568 PSYSPTSPSYSPTSPS-YSP 1586
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1529 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1588
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1589 PSYSPTSPSYSPTSPS-YSP 1607
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1536 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1595
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1596 PSYSPTSPSYSPTSPN-YSP 1614
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1557 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSR 1616
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1617 PNYTPTSPSYSPTSPS-YSP 1635
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1473 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1532
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1533 PSYSPTSPSYSPTSPS-YSP 1551
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1466 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1525
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1526 PSYSPTSPSYSPTSPS-YSP 1544
Score = 106 bits (265), Expect = 9e-22
Identities = 51/74 (68%), Positives = 59/74 (79%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1578 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTS 1637
Query: 365 TGYSPSQPGYSPSS 324
Y+P P YSP+S
Sbjct: 1638 PNYTPMSPNYSPTS 1651
Score = 95.5 bits (236), Expect = 2e-18
Identities = 52/87 (59%), Positives = 65/87 (74%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S P+Y+P+S
Sbjct: 1564 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTS 1623
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P +SP S YSP+ P Y+P S + Y+P
Sbjct: 1624 PSYSPTSPSYSPTSPNYTPMSPN-YSP 1649
Score = 90.1 bits (222), Expect = 9e-17
Identities = 48/85 (56%), Positives = 57/85 (67%), Gaps = 16/85 (18%)
Frame = -2
Query: 512 SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP
Sbjct: 1454 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1513
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTP 306
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1514 YSPTSPSYSPTSPSYSPTSPS-YSP 1537
Score = 85.9 bits (211), Expect = 2e-15
Identities = 38/54 (70%), Positives = 49/54 (90%), Gaps = 1/54 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 381
SP+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + +SP+YSP+SP
Sbjct: 1599 SPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1652
[52][TOP]
>UniRef100_UPI00005A0B22 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 13 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B22
Length = 1722
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1487 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1546
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1547 PSYSPTSPSYSPTSPS-YSP 1565
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1508 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1567
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1568 PSYSPTSPSYSPTSPS-YSP 1586
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1529 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1588
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1589 PSYSPTSPSYSPTSPS-YSP 1607
Score = 112 bits (281), Expect = 1e-23
Identities = 56/82 (68%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1557 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSS 1616
Query: 362 -GYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSP+S + Y+P T
Sbjct: 1617 PKYSPTSPKYSPTSPT-YSPTT 1637
Score = 112 bits (281), Expect = 1e-23
Identities = 56/80 (70%), Positives = 68/80 (85%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSPSSP++SP S
Sbjct: 1564 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPKYSPTS 1623
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP +T +Y+P
Sbjct: 1624 PKYSPTSPTYSP-TTPKYSP 1642
Score = 112 bits (280), Expect = 2e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1550 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1609
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS P YSP+S +Y+P
Sbjct: 1610 PNYSPSSPKYSPTS-PKYSP 1628
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1473 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1532
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1533 PSYSPTSPSYSPTSPS-YSP 1551
Score = 107 bits (268), Expect = 4e-22
Identities = 54/82 (65%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1613 SPSSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1672
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1673 PKYSPTSPTYSPTSPKGSTYSP 1694
Score = 107 bits (266), Expect = 7e-22
Identities = 53/80 (66%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSP+YSPSSP YSP+SP S SP YSP++P++SP S
Sbjct: 1585 SPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1644
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S +Y+P
Sbjct: 1645 PTYSPTSPVYTPTS-PKYSP 1663
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1466 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1525
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1526 PSYSPTSPSYSPTSPS-YSP 1544
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1627 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1686
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1687 PKGSTYSPTSPGYSPTS 1703
Score = 102 bits (253), Expect = 2e-20
Identities = 50/80 (62%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP YSPTSP YSPTSP+YSP++P YSP+SP S SP Y+P+SP++SP S
Sbjct: 1606 SPTSPNYSPSSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTS 1665
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1666 PTYSPTSPKYSPTSPT-YSP 1684
Score = 90.1 bits (222), Expect = 9e-17
Identities = 48/85 (56%), Positives = 57/85 (67%), Gaps = 16/85 (18%)
Frame = -2
Query: 512 SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP
Sbjct: 1454 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1513
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTP 306
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1514 YSPTSPSYSPTSPSYSPTSPS-YSP 1537
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 1641 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYS 1700
Query: 371 P-STGYSPSQPGYSPSSTSQ 315
P S YS + P SP + +
Sbjct: 1701 PTSPTYSLTSPAISPDDSDE 1720
[53][TOP]
>UniRef100_UPI00005A0B21 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 12 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B21
Length = 1922
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1622 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1681
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1682 PSYSPTSPSYSPTSPS-YSP 1700
Score = 113 bits (283), Expect = 8e-24
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1685 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1744
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS+P Y+P+S S Y+P
Sbjct: 1745 PNYSPSRPNYTPTSPS-YSP 1763
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1643 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1702
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1703 PSYSPTSPSYSPTSPS-YSP 1721
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1664 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1723
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1724 PSYSPTSPSYSPTSPS-YSP 1742
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1671 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1730
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1731 PSYSPTSPSYSPTSPN-YSP 1749
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1692 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSR 1751
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1752 PNYTPTSPSYSPTSPS-YSP 1770
Score = 111 bits (277), Expect = 4e-23
Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 3/81 (3%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1713 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTS 1772
Query: 365 TGYSPSQPGYSPSSTS-QYTP 306
Y+P P YSP+ TS +YTP
Sbjct: 1773 PNYTPMSPNYSPTPTSPKYTP 1793
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1608 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1667
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1668 PSYSPTSPSYSPTSPS-YSP 1686
Score = 107 bits (266), Expect = 7e-22
Identities = 52/85 (61%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S P+Y+P+SP +SP S
Sbjct: 1706 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTS 1765
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDK 291
YSP+ P Y+P S + T+ K
Sbjct: 1766 PSYSPTSPNYTPMSPNYSPTPTSPK 1790
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1601 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1660
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1661 PSYSPTSPSYSPTSPS-YSP 1679
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1813 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1872
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1873 PKYSPTSPTYSPTSPKGSTYSP 1894
Score = 105 bits (261), Expect = 3e-21
Identities = 53/89 (59%), Positives = 64/89 (71%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
SP+SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP YSP+SP ++P
Sbjct: 1720 SPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMS 1779
Query: 368 --------STGYSPSQPGYSPSSTSQYTP 306
S Y+P+ P YSPSS +YTP
Sbjct: 1780 PNYSPTPTSPKYTPTSPSYSPSS-PEYTP 1807
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1799 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1858
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1859 PKYSPTSPTYSPTS-PKYSP 1877
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1827 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1886
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1887 PKGSTYSPTSPGYSPTS 1903
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/79 (60%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
SP+ +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP YSP+SP +SP+T
Sbjct: 1779 SPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1838
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S YTP
Sbjct: 1839 KYSPTSPTYSPTS-PVYTP 1856
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1576 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1635
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1636 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1672
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 1841 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYS 1900
Query: 371 P-STGYSPSQPGYSPSSTSQ 315
P S YS + P SP + +
Sbjct: 1901 PTSPTYSLTSPAISPDDSDE 1920
Score = 58.9 bits (141), Expect = 2e-07
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP +
Sbjct: 1548 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYE 1600
Query: 371 PST--GYSPSQPGYSPSSTSQYTP 306
P + GY+P P YSP+S S Y+P
Sbjct: 1601 PRSPGGYTPQSPSYSPTSPS-YSP 1623
Score = 53.5 bits (127), Expect = 9e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1536 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1592
Query: 356 SPSQPGYSPSSTSQYTPQT 300
SP+ P Y P S YTPQ+
Sbjct: 1593 SPTSPAYEPRSPGGYTPQS 1611
[54][TOP]
>UniRef100_UPI00005A0B20 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 11 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B20
Length = 1923
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1623 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1682
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1683 PSYSPTSPSYSPTSPS-YSP 1701
Score = 113 bits (283), Expect = 8e-24
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1686 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1745
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS+P Y+P+S S Y+P
Sbjct: 1746 PNYSPSRPNYTPTSPS-YSP 1764
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1644 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1703
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1704 PSYSPTSPSYSPTSPS-YSP 1722
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1665 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1724
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1725 PSYSPTSPSYSPTSPS-YSP 1743
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1672 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1731
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1732 PSYSPTSPSYSPTSPN-YSP 1750
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1693 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSR 1752
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1753 PNYTPTSPSYSPTSPS-YSP 1771
Score = 111 bits (277), Expect = 4e-23
Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 3/81 (3%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1714 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTS 1773
Query: 365 TGYSPSQPGYSPSSTS-QYTP 306
Y+P P YSP+ TS +YTP
Sbjct: 1774 PNYTPMSPNYSPTPTSPKYTP 1794
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1669 PSYSPTSPSYSPTSPS-YSP 1687
Score = 107 bits (266), Expect = 7e-22
Identities = 52/85 (61%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S P+Y+P+SP +SP S
Sbjct: 1707 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTS 1766
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDK 291
YSP+ P Y+P S + T+ K
Sbjct: 1767 PSYSPTSPNYTPMSPNYSPTPTSPK 1791
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1814 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1873
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1874 PKYSPTSPTYSPTSPKGSTYSP 1895
Score = 105 bits (261), Expect = 3e-21
Identities = 53/89 (59%), Positives = 64/89 (71%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
SP+SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP YSP+SP ++P
Sbjct: 1721 SPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMS 1780
Query: 368 --------STGYSPSQPGYSPSSTSQYTP 306
S Y+P+ P YSPSS +YTP
Sbjct: 1781 PNYSPTPTSPKYTPTSPSYSPSS-PEYTP 1808
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1800 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1859
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1860 PKYSPTSPTYSPTS-PKYSP 1878
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1828 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1887
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1888 PKGSTYSPTSPGYSPTS 1904
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/79 (60%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
SP+ +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP YSP+SP +SP+T
Sbjct: 1780 SPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1839
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S YTP
Sbjct: 1840 KYSPTSPTYSPTS-PVYTP 1857
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 1842 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYS 1901
Query: 371 P-STGYSPSQPGYSPSSTSQ 315
P S YS + P SP + +
Sbjct: 1902 PTSPTYSLTSPAISPDDSDE 1921
Score = 58.9 bits (141), Expect = 2e-07
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP +
Sbjct: 1549 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYE 1601
Query: 371 PST--GYSPSQPGYSPSSTSQYTP 306
P + GY+P P YSP+S S Y+P
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPS-YSP 1624
Score = 53.5 bits (127), Expect = 9e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1537 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1593
Query: 356 SPSQPGYSPSSTSQYTPQT 300
SP+ P Y P S YTPQ+
Sbjct: 1594 SPTSPAYEPRSPGGYTPQS 1612
[55][TOP]
>UniRef100_UPI00005A0B1F PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 10 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1F
Length = 1840
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1556 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1615
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1616 PSYSPTSPSYSPTSPS-YSP 1634
Score = 113 bits (283), Expect = 8e-24
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1619 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1678
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS+P Y+P+S S Y+P
Sbjct: 1679 PNYSPSRPNYTPTSPS-YSP 1697
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1577 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1636
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1637 PSYSPTSPSYSPTSPS-YSP 1655
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1598 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1657
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1658 PSYSPTSPSYSPTSPS-YSP 1676
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1605 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1664
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1665 PSYSPTSPSYSPTSPN-YSP 1683
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1626 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSR 1685
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1686 PNYTPTSPSYSPTSPS-YSP 1704
Score = 110 bits (276), Expect = 5e-23
Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1647 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTS 1706
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSPSS +YTP
Sbjct: 1707 PKYTPTSPSYSPSS-PEYTP 1725
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1542 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1601
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1602 PSYSPTSPSYSPTSPS-YSP 1620
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1535 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1594
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1595 PSYSPTSPSYSPTSPS-YSP 1613
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1731 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1790
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1791 PKYSPTSPTYSPTSPKGSTYSP 1812
Score = 106 bits (264), Expect = 1e-21
Identities = 51/80 (63%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1668 SPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTS 1727
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1728 PKYSPTSPKYSPTS-PKYSP 1746
Score = 105 bits (262), Expect = 2e-21
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSPTSP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1689 TPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTS 1748
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1749 PTYSPTTPKYSPTSPT-YSP 1767
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1717 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1776
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1777 PKYSPTSPTYSPTS-PKYSP 1795
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1745 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1804
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1805 PKGSTYSPTSPGYSPTS 1821
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1710 TPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS 1769
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S + Y+P
Sbjct: 1770 PVYTPTSPKYSPTSPT-YSP 1788
Score = 97.1 bits (240), Expect = 7e-19
Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
SP+SP YSP+ PNY+PTSPSYSPTSPSYSP+SP +YSPSSP + SP YSP+S
Sbjct: 1675 SPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS 1734
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P++SP S YSP+ P YSP +T +Y+P
Sbjct: 1735 PKYSPTSPKYSPTSPTYSP-TTPKYSP 1760
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 1759 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYS 1818
Query: 371 P-STGYSPSQPGYSPSSTSQ 315
P S YS + P SP + +
Sbjct: 1819 PTSPTYSLTSPAISPDDSDE 1838
Score = 79.0 bits (193), Expect = 2e-13
Identities = 46/94 (48%), Positives = 56/94 (59%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSP---------------SYSPSSPTYSPSSPYNSGVS 405
SP SP P+SP YSPTSP SYSP+SP+YSP+SP S S
Sbjct: 1508 SPGSP-GPSSPYIPSPGELYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTS 1566
Query: 404 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
P+YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1567 PNYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1599
Score = 65.9 bits (159), Expect = 2e-09
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN-SGVSPDYSPSSPQFSP-STGY 357
+P SP SP P+SP YSP+SP Y P SP + SP YSP+SP +SP S Y
Sbjct: 1505 TPGSPGSPG--PSSPYIPSPGELYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSY 1562
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 1563 SPTSPNYSPTSPS-YSP 1578
Score = 53.9 bits (128), Expect = 7e-06
Identities = 34/71 (47%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = -2
Query: 512 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST--GYSPSQPG 339
SP YSP ++SPT S P SP PSSPY YSP+SP + P + GY+P P
Sbjct: 1495 SPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGELYSPTSPAYEPRSPGGYTPQSPS 1547
Query: 338 YSPSSTSQYTP 306
YSP+S S Y+P
Sbjct: 1548 YSPTSPS-YSP 1557
[56][TOP]
>UniRef100_UPI00005A0B1E PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 9 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1E
Length = 1851
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1560 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1619
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1620 PSYSPTSPSYSPTSPS-YSP 1638
Score = 113 bits (283), Expect = 8e-24
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1623 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1682
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS+P Y+P+S S Y+P
Sbjct: 1683 PNYSPSRPNYTPTSPS-YSP 1701
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1581 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1640
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1641 PSYSPTSPSYSPTSPS-YSP 1659
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 112 bits (280), Expect = 2e-23
Identities = 55/82 (67%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1630 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSR 1689
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
Y+P+ P YSP+S S Y+P +
Sbjct: 1690 PNYTPTSPSYSPTSPS-YSPSS 1710
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1669 PSYSPTSPSYSPTSPN-YSP 1687
Score = 110 bits (276), Expect = 5e-23
Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP YSPSSP +SP S
Sbjct: 1658 SPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPSSPSYSPTS 1717
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSPSS +YTP
Sbjct: 1718 PKYTPTSPSYSPSS-PEYTP 1736
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1546 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1605
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1606 PSYSPTSPSYSPTSPS-YSP 1624
Score = 108 bits (270), Expect = 2e-22
Identities = 53/80 (66%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+ PNY+PTSPSYSPTSPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1679 SPTSPNYSPSRPNYTPTSPSYSPTSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTS 1738
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1739 PKYSPTSPKYSPTS-PKYSP 1757
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1539 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1598
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1599 PSYSPTSPSYSPTSPS-YSP 1617
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1742 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1801
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1802 PKYSPTSPTYSPTSPKGSTYSP 1823
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1700 SPTSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTS 1759
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1760 PTYSPTTPKYSPTSPT-YSP 1778
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1728 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1787
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1788 PKYSPTSPTYSPTS-PKYSP 1806
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1756 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1815
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1816 PKGSTYSPTSPGYSPTS 1832
Score = 102 bits (253), Expect = 2e-20
Identities = 54/86 (62%), Positives = 66/86 (76%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSPS P ++P S
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTS 1696
Query: 365 TGYSPSQP---GYSPS---STSQYTP 306
YSP+ P SPS ++ +YTP
Sbjct: 1697 PSYSPTSPSYSPSSPSYSPTSPKYTP 1722
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1721 TPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS 1780
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S + Y+P
Sbjct: 1781 PVYTPTSPKYSPTSPT-YSP 1799
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1514 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1573
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1574 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1610
Score = 93.6 bits (231), Expect = 8e-18
Identities = 51/87 (58%), Positives = 65/87 (74%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTS-------PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SPS P Y+PTS P+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+S
Sbjct: 1686 SPSRPNYTPTSPSYSPTSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS 1745
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P++SP S YSP+ P YSP +T +Y+P
Sbjct: 1746 PKYSPTSPKYSPTSPTYSP-TTPKYSP 1771
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 1770 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYS 1829
Query: 371 P-STGYSPSQPGYSPSSTSQ 315
P S YS + P SP + +
Sbjct: 1830 PTSPTYSLTSPAISPDDSDE 1849
Score = 57.8 bits (138), Expect = 5e-07
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 16/85 (18%)
Frame = -2
Query: 512 SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPY--------NSGVSPDYSPSSPQ 378
SP +SPT S PS Y PS SP+YSP+SP + SP YSP+SP
Sbjct: 1499 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1558
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTP 306
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1559 YSPTSPSYSPTSPNYSPTSPS-YSP 1582
Score = 57.0 bits (136), Expect = 8e-07
Identities = 36/75 (48%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = -2
Query: 512 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPST--GYSP 351
SP YSP ++SPT S P SP PSSPY +SP YSP+SP + P + GY+P
Sbjct: 1495 SPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTP 1547
Query: 350 SQPGYSPSSTSQYTP 306
P YSP+S S Y+P
Sbjct: 1548 QSPSYSPTSPS-YSP 1561
[57][TOP]
>UniRef100_UPI00005A0B1D PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 1 n=2 Tax=Canis lupus familiaris
RepID=UPI00005A0B1D
Length = 1764
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1598 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1657
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1658 PSYSPTSPSYSPTSPS-YSP 1676
Score = 113 bits (283), Expect = 8e-24
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1661 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1720
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS+P Y+P+S S Y+P
Sbjct: 1721 PNYSPSRPNYTPTSPS-YSP 1739
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1619 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1678
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1679 PSYSPTSPSYSPTSPS-YSP 1697
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1640 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1699
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1700 PSYSPTSPSYSPTSPS-YSP 1718
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1647 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1706
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1707 PSYSPTSPSYSPTSPN-YSP 1725
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1668 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSR 1727
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1728 PNYTPTSPSYSPTSPS-YSP 1746
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1584 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1643
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1644 PSYSPTSPSYSPTSPS-YSP 1662
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1577 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1636
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1637 PSYSPTSPSYSPTSPS-YSP 1655
Score = 106 bits (265), Expect = 9e-22
Identities = 51/74 (68%), Positives = 59/74 (79%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1689 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTS 1748
Query: 365 TGYSPSQPGYSPSS 324
Y+P P YSP+S
Sbjct: 1749 PNYTPMSPNYSPTS 1762
Score = 95.5 bits (236), Expect = 2e-18
Identities = 52/87 (59%), Positives = 65/87 (74%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S P+Y+P+S
Sbjct: 1675 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTS 1734
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P +SP S YSP+ P Y+P S + Y+P
Sbjct: 1735 PSYSPTSPSYSPTSPNYTPMSPN-YSP 1760
Score = 85.9 bits (211), Expect = 2e-15
Identities = 38/54 (70%), Positives = 49/54 (90%), Gaps = 1/54 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 381
SP+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + +SP+YSP+SP
Sbjct: 1710 SPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1763
Score = 77.4 bits (189), Expect = 6e-13
Identities = 45/90 (50%), Positives = 55/90 (61%), Gaps = 17/90 (18%)
Frame = -2
Query: 524 YSPTSPNYSPT-SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGVSPDYS 393
Y SP+ SPSYSPT SPSYSP+SP+YSP+SP S SP+YS
Sbjct: 1553 YGAWSPSVGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYS 1612
Query: 392 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
P+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1613 PTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1641
[58][TOP]
>UniRef100_UPI00005A0B1C PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 8 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1C
Length = 1719
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1553 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1612
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1613 PSYSPTSPSYSPTSPS-YSP 1631
Score = 113 bits (283), Expect = 8e-24
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1616 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1675
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS+P Y+P+S S Y+P
Sbjct: 1676 PNYSPSRPNYTPTSPS-YSP 1694
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1574 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1633
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1634 PSYSPTSPSYSPTSPS-YSP 1652
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1595 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1654
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1655 PSYSPTSPSYSPTSPS-YSP 1673
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPN-YSP 1680
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1623 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSR 1682
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1683 PNYTPTSPSYSPTSPS-YSP 1701
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1539 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1598
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1599 PSYSPTSPSYSPTSPS-YSP 1617
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1532 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1591
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1592 PSYSPTSPSYSPTSPS-YSP 1610
Score = 106 bits (265), Expect = 9e-22
Identities = 51/74 (68%), Positives = 59/74 (79%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1644 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTS 1703
Query: 365 TGYSPSQPGYSPSS 324
Y+P P YSP+S
Sbjct: 1704 PNYTPMSPNYSPTS 1717
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1507 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1566
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1567 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1603
Score = 95.5 bits (236), Expect = 2e-18
Identities = 52/87 (59%), Positives = 65/87 (74%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S P+Y+P+S
Sbjct: 1630 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTS 1689
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P +SP S YSP+ P Y+P S + Y+P
Sbjct: 1690 PSYSPTSPSYSPTSPNYTPMSPN-YSP 1715
Score = 85.9 bits (211), Expect = 2e-15
Identities = 38/54 (70%), Positives = 49/54 (90%), Gaps = 1/54 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 381
SP+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + +SP+YSP+SP
Sbjct: 1665 SPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1718
Score = 58.9 bits (141), Expect = 2e-07
Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 17/93 (18%)
Frame = -2
Query: 533 SSPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPY--------NSGVSP 402
+S +SP SP +SPT S PS Y PS SP+YSP+SP + SP
Sbjct: 1484 ASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSP 1543
Query: 401 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1544 SYSPTSPSYSPTSPSYSPTSPNYSPTSPS-YSP 1575
Score = 58.2 bits (139), Expect = 4e-07
Identities = 39/80 (48%), Positives = 49/80 (61%), Gaps = 9/80 (11%)
Frame = -2
Query: 518 PTS-PNYSPTSPSYSPT-SPSY-SPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPST- 363
PT+ P+ S SP YSP SP+ SP SP PSSPY +SP YSP+SP + P +
Sbjct: 1478 PTNIPDASGFSPGYSPAWSPTPGSPGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSP 1535
Query: 362 -GYSPSQPGYSPSSTSQYTP 306
GY+P P YSP+S S Y+P
Sbjct: 1536 GGYTPQSPSYSPTSPS-YSP 1554
[59][TOP]
>UniRef100_UPI00005A0B1B PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 7 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1B
Length = 1858
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1553 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1612
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1613 PSYSPTSPSYSPTSPS-YSP 1631
Score = 113 bits (283), Expect = 8e-24
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1616 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1675
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS+P Y+P+S S Y+P
Sbjct: 1676 PNYSPSRPNYTPTSPS-YSP 1694
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1574 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1633
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1634 PSYSPTSPSYSPTSPS-YSP 1652
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1595 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1654
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1655 PSYSPTSPSYSPTSPS-YSP 1673
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPN-YSP 1680
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1623 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSR 1682
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1683 PNYTPTSPSYSPTSPS-YSP 1701
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1539 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1598
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1599 PSYSPTSPSYSPTSPS-YSP 1617
Score = 108 bits (271), Expect = 2e-22
Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1644 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTS 1703
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P P YSP+S S Y+P
Sbjct: 1704 PNYTPMSPNYSPTSPS-YSP 1722
Score = 108 bits (271), Expect = 2e-22
Identities = 52/80 (65%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + +SP+YSP+SP +SP S
Sbjct: 1665 SPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPSYSPTS 1724
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSPSS +YTP
Sbjct: 1725 PKYTPTSPSYSPSS-PEYTP 1743
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1532 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1591
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1592 PSYSPTSPSYSPTSPS-YSP 1610
Score = 106 bits (265), Expect = 9e-22
Identities = 52/82 (63%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNY+P SP+YSPTSPSYSP+SP Y+P+SP S SP+Y+P+SP++SP S
Sbjct: 1693 SPTSPSYSPTSPNYTPMSPNYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS 1752
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSP+S + Y+P T
Sbjct: 1753 PKYSPTSPKYSPTSPT-YSPTT 1773
Score = 106 bits (265), Expect = 9e-22
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP Y+P SPNYSPTSPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1700 SPTSPNYTPMSPNYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS 1759
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP +T +Y+P
Sbjct: 1760 PKYSPTSPTYSP-TTPKYSP 1778
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1749 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1808
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1809 PKYSPTSPTYSPTSPKGSTYSP 1830
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1735 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1794
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1795 PKYSPTSPTYSPTS-PKYSP 1813
Score = 104 bits (260), Expect = 3e-21
Identities = 52/80 (65%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1707 TPMSPNYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTS 1766
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1767 PTYSPTTPKYSPTSPT-YSP 1785
Score = 103 bits (256), Expect = 1e-20
Identities = 49/80 (61%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSPTSP+YSPTSP+Y+P SP+YSP+SP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1686 TPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTS 1745
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1746 PKYSPTSPKYSPTS-PKYSP 1764
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1763 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1822
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1823 PKGSTYSPTSPGYSPTS 1839
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1728 TPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS 1787
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S + Y+P
Sbjct: 1788 PVYTPTSPKYSPTSPT-YSP 1806
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1507 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1566
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1567 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1603
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 1777 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYS 1836
Query: 371 P-STGYSPSQPGYSPSSTSQ 315
P S YS + P SP + +
Sbjct: 1837 PTSPTYSLTSPAISPDDSDE 1856
Score = 58.9 bits (141), Expect = 2e-07
Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 17/93 (18%)
Frame = -2
Query: 533 SSPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPY--------NSGVSP 402
+S +SP SP +SPT S PS Y PS SP+YSP+SP + SP
Sbjct: 1484 ASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSP 1543
Query: 401 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1544 SYSPTSPSYSPTSPSYSPTSPNYSPTSPS-YSP 1575
Score = 58.2 bits (139), Expect = 4e-07
Identities = 39/80 (48%), Positives = 49/80 (61%), Gaps = 9/80 (11%)
Frame = -2
Query: 518 PTS-PNYSPTSPSYSPT-SPSY-SPSSPTYSPSSPY----NSGVSPDYSPSSPQFSPST- 363
PT+ P+ S SP YSP SP+ SP SP PSSPY +SP YSP+SP + P +
Sbjct: 1478 PTNIPDASGFSPGYSPAWSPTPGSPGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSP 1535
Query: 362 -GYSPSQPGYSPSSTSQYTP 306
GY+P P YSP+S S Y+P
Sbjct: 1536 GGYTPQSPSYSPTSPS-YSP 1554
[60][TOP]
>UniRef100_UPI00005A0B1A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 6 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1A
Length = 1767
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1601 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1660
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1661 PSYSPTSPSYSPTSPS-YSP 1679
Score = 113 bits (283), Expect = 8e-24
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1664 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1723
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS+P Y+P+S S Y+P
Sbjct: 1724 PNYSPSRPNYTPTSPS-YSP 1742
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1622 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1681
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1682 PSYSPTSPSYSPTSPS-YSP 1700
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1643 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1702
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1703 PSYSPTSPSYSPTSPS-YSP 1721
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1650 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1709
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1710 PSYSPTSPSYSPTSPN-YSP 1728
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1671 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSR 1730
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1731 PNYTPTSPSYSPTSPS-YSP 1749
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1587 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1646
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1647 PSYSPTSPSYSPTSPS-YSP 1665
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1580 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1639
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1640 PSYSPTSPSYSPTSPS-YSP 1658
Score = 106 bits (265), Expect = 9e-22
Identities = 51/74 (68%), Positives = 59/74 (79%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1692 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTS 1751
Query: 365 TGYSPSQPGYSPSS 324
Y+P P YSP+S
Sbjct: 1752 PNYTPMSPNYSPTS 1765
Score = 95.5 bits (236), Expect = 2e-18
Identities = 52/87 (59%), Positives = 65/87 (74%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S P+Y+P+S
Sbjct: 1678 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTS 1737
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P +SP S YSP+ P Y+P S + Y+P
Sbjct: 1738 PSYSPTSPSYSPTSPNYTPMSPN-YSP 1763
Score = 85.9 bits (211), Expect = 2e-15
Identities = 38/54 (70%), Positives = 49/54 (90%), Gaps = 1/54 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 381
SP+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + +SP+YSP+SP
Sbjct: 1713 SPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1766
Score = 72.4 bits (176), Expect = 2e-11
Identities = 42/79 (53%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN-SGVSPDYSPSSPQFSP-ST 363
PSSPY P SP S SPSYSP+SP Y P SP + SP YSP+SP +SP S
Sbjct: 1551 PSSPYIP-----SPGELSCGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSP 1605
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1606 SYSPTSPNYSPTSPS-YSP 1623
Score = 56.6 bits (135), Expect = 1e-06
Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFS-- 372
SP S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS + S
Sbjct: 1508 SPRSGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPSPGELSCG 1565
Query: 371 -PSTGYSPSQPGYSPSSTSQYTPQT 300
S YSP+ P Y P S YTPQ+
Sbjct: 1566 AMSPSYSPTSPAYEPRSPGGYTPQS 1590
[61][TOP]
>UniRef100_UPI00005A0B19 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 5 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B19
Length = 1693
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1527 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1586
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1587 PSYSPTSPSYSPTSPS-YSP 1605
Score = 113 bits (283), Expect = 8e-24
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1590 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1649
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS+P Y+P+S S Y+P
Sbjct: 1650 PNYSPSRPNYTPTSPS-YSP 1668
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1548 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1607
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1608 PSYSPTSPSYSPTSPS-YSP 1626
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1569 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1628
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1629 PSYSPTSPSYSPTSPS-YSP 1647
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1576 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1635
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1636 PSYSPTSPSYSPTSPN-YSP 1654
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1597 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSR 1656
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1657 PNYTPTSPSYSPTSPS-YSP 1675
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1513 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1572
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1573 PSYSPTSPSYSPTSPS-YSP 1591
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1506 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1565
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1566 PSYSPTSPSYSPTSPS-YSP 1584
Score = 106 bits (265), Expect = 9e-22
Identities = 51/74 (68%), Positives = 59/74 (79%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1618 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTS 1677
Query: 365 TGYSPSQPGYSPSS 324
Y+P P YSP+S
Sbjct: 1678 PNYTPMSPNYSPTS 1691
Score = 95.5 bits (236), Expect = 2e-18
Identities = 52/87 (59%), Positives = 65/87 (74%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S P+Y+P+S
Sbjct: 1604 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTS 1663
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P +SP S YSP+ P Y+P S + Y+P
Sbjct: 1664 PSYSPTSPSYSPTSPNYTPMSPN-YSP 1689
Score = 91.3 bits (225), Expect = 4e-17
Identities = 49/94 (52%), Positives = 60/94 (63%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYNSGVS 405
+P + SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP S S
Sbjct: 1485 TPGAAGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1544
Query: 404 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
P YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1545 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1577
Score = 85.9 bits (211), Expect = 2e-15
Identities = 38/54 (70%), Positives = 49/54 (90%), Gaps = 1/54 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 381
SP+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + +SP+YSP+SP
Sbjct: 1639 SPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1692
[62][TOP]
>UniRef100_UPI00005A0B17 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 3 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B17
Length = 1788
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1622 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1681
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1682 PSYSPTSPSYSPTSPS-YSP 1700
Score = 113 bits (283), Expect = 8e-24
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1685 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1744
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS+P Y+P+S S Y+P
Sbjct: 1745 PNYSPSRPNYTPTSPS-YSP 1763
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1643 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1702
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1703 PSYSPTSPSYSPTSPS-YSP 1721
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1664 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1723
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1724 PSYSPTSPSYSPTSPS-YSP 1742
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1671 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1730
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1731 PSYSPTSPSYSPTSPN-YSP 1749
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1692 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSR 1751
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1752 PNYTPTSPSYSPTSPS-YSP 1770
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1608 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1667
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1668 PSYSPTSPSYSPTSPS-YSP 1686
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1601 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1660
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1661 PSYSPTSPSYSPTSPS-YSP 1679
Score = 106 bits (265), Expect = 9e-22
Identities = 51/74 (68%), Positives = 59/74 (79%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1713 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTS 1772
Query: 365 TGYSPSQPGYSPSS 324
Y+P P YSP+S
Sbjct: 1773 PNYTPMSPNYSPTS 1786
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1576 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1635
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1636 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1672
Score = 95.5 bits (236), Expect = 2e-18
Identities = 52/87 (59%), Positives = 65/87 (74%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S P+Y+P+S
Sbjct: 1699 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTS 1758
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P +SP S YSP+ P Y+P S + Y+P
Sbjct: 1759 PSYSPTSPSYSPTSPNYTPMSPN-YSP 1784
Score = 85.9 bits (211), Expect = 2e-15
Identities = 38/54 (70%), Positives = 49/54 (90%), Gaps = 1/54 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 381
SP+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + +SP+YSP+SP
Sbjct: 1734 SPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1787
Score = 58.9 bits (141), Expect = 2e-07
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP +
Sbjct: 1548 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYE 1600
Query: 371 PST--GYSPSQPGYSPSSTSQYTP 306
P + GY+P P YSP+S S Y+P
Sbjct: 1601 PRSPGGYTPQSPSYSPTSPS-YSP 1623
Score = 53.5 bits (127), Expect = 9e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1536 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1592
Query: 356 SPSQPGYSPSSTSQYTPQT 300
SP+ P Y P S YTPQ+
Sbjct: 1593 SPTSPAYEPRSPGGYTPQS 1611
[63][TOP]
>UniRef100_UPI00005A0B16 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 2 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B16
Length = 1922
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1622 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1681
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1682 PSYSPTSPSYSPTSPS-YSP 1700
Score = 113 bits (283), Expect = 8e-24
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1685 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1744
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS+P Y+P+S S Y+P
Sbjct: 1745 PNYSPSRPNYTPTSPS-YSP 1763
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1643 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1702
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1703 PSYSPTSPSYSPTSPS-YSP 1721
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1664 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1723
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1724 PSYSPTSPSYSPTSPS-YSP 1742
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1671 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1730
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1731 PSYSPTSPSYSPTSPN-YSP 1749
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1692 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSR 1751
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1752 PNYTPTSPSYSPTSPS-YSP 1770
Score = 111 bits (277), Expect = 4e-23
Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 3/81 (3%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1713 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTS 1772
Query: 365 TGYSPSQPGYSPSSTS-QYTP 306
Y+P P YSP+ TS +YTP
Sbjct: 1773 PNYTPMSPNYSPTPTSPKYTP 1793
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1608 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1667
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1668 PSYSPTSPSYSPTSPS-YSP 1686
Score = 107 bits (266), Expect = 7e-22
Identities = 52/85 (61%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S P+Y+P+SP +SP S
Sbjct: 1706 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTS 1765
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDK 291
YSP+ P Y+P S + T+ K
Sbjct: 1766 PSYSPTSPNYTPMSPNYSPTPTSPK 1790
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1601 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1660
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1661 PSYSPTSPSYSPTSPS-YSP 1679
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1813 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1872
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1873 PKYSPTSPTYSPTSPKGSTYSP 1894
Score = 105 bits (261), Expect = 3e-21
Identities = 53/89 (59%), Positives = 64/89 (71%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
SP+SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP YSP+SP ++P
Sbjct: 1720 SPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMS 1779
Query: 368 --------STGYSPSQPGYSPSSTSQYTP 306
S Y+P+ P YSPSS +YTP
Sbjct: 1780 PNYSPTPTSPKYTPTSPSYSPSS-PEYTP 1807
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1799 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1858
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1859 PKYSPTSPTYSPTS-PKYSP 1877
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1827 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1886
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1887 PKGSTYSPTSPGYSPTS 1903
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/79 (60%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
SP+ +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP YSP+SP +SP+T
Sbjct: 1779 SPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1838
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S YTP
Sbjct: 1839 KYSPTSPTYSPTS-PVYTP 1856
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1576 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1635
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1636 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1672
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 1841 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYS 1900
Query: 371 P-STGYSPSQPGYSPSSTSQ 315
P S YS + P SP + +
Sbjct: 1901 PTSPTYSLTSPAISPDDSDE 1920
Score = 58.9 bits (141), Expect = 2e-07
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP +
Sbjct: 1548 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYE 1600
Query: 371 PST--GYSPSQPGYSPSSTSQYTP 306
P + GY+P P YSP+S S Y+P
Sbjct: 1601 PRSPGGYTPQSPSYSPTSPS-YSP 1623
Score = 53.5 bits (127), Expect = 9e-06
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S Y
Sbjct: 1536 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMSPSY 1592
Query: 356 SPSQPGYSPSSTSQYTPQT 300
SP+ P Y P S YTPQ+
Sbjct: 1593 SPTSPAYEPRSPGGYTPQS 1611
[64][TOP]
>UniRef100_UPI0000546D90 PREDICTED: im:7136071 isoform 1 n=1 Tax=Danio rerio
RepID=UPI0000546D90
Length = 1972
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1627 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1686
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1687 PSYSPTSPSYSPTSPS-YSP 1705
Score = 114 bits (284), Expect = 6e-24
Identities = 55/82 (67%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP+Y+PTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1739 SPTSPSYSPTSPSYSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTS 1798
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSPSS +YTPQ+
Sbjct: 1799 PSYSPTSPSYSPSS-PRYTPQS 1819
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1648 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1707
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1708 PSYSPTSPSYSPTSPS-YSP 1726
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1669 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1728
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1729 PSYSPTSPSYSPTSPS-YSP 1747
Score = 112 bits (281), Expect = 1e-23
Identities = 55/80 (68%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y+P+SP +SP S
Sbjct: 1711 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPSYSPTS 1770
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + YTP
Sbjct: 1771 PSYSPTSPSYSPTSPN-YTP 1789
Score = 112 bits (281), Expect = 1e-23
Identities = 55/82 (67%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNY+PTSPSYSPTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S
Sbjct: 1746 SPTSPSYSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTS 1805
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSPS P Y+P S + YTP +
Sbjct: 1806 PSYSPSSPRYTPQSPT-YTPSS 1826
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1620 SPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1679
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1680 PSYSPTSPSYSPTSPS-YSP 1698
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1690 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1749
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S S Y+P
Sbjct: 1750 PSYSPTSPNYTPTSPS-YSP 1768
Score = 112 bits (279), Expect = 2e-23
Identities = 56/80 (70%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP Y+PTSPNYSPTSPSYSPTSPSYSPSSP Y+P SP + SP YSPSSP +SP S
Sbjct: 1781 SPTSPNYTPTSPNYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTS 1840
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSPSS +YTP
Sbjct: 1841 PKYTPTSPSYSPSS-PEYTP 1859
Score = 108 bits (271), Expect = 2e-22
Identities = 55/87 (63%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y+PTSP+YSPTSPSYSPTSPSYSP+SP Y+P+SP S SP YSP+SP +SPS+
Sbjct: 1753 SPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPSS 1812
Query: 362 --------GYSPSQPGYSPSSTSQYTP 306
Y+PS P YSPSS S Y+P
Sbjct: 1813 PRYTPQSPTYTPSSPSYSPSSPS-YSP 1838
Score = 108 bits (269), Expect = 3e-22
Identities = 52/79 (65%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
SP Y+P SP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1607 SPGGGYTPQSPGYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP 1666
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1667 SYSPTSPSYSPTSPS-YSP 1684
Score = 107 bits (266), Expect = 7e-22
Identities = 55/99 (55%), Positives = 71/99 (71%), Gaps = 14/99 (14%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP YSPT+P YSPTSP+YSP+SPTY+P+SP S SP YSP+SP++SP+
Sbjct: 1872 SPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSPTS 1931
Query: 365 ----------TGYSPSQPGYSPSSTSQYTP--QTNDKDE 285
+ YSP+ PGYSP+S + Y+P +D DE
Sbjct: 1932 PTYSPTSPKGSTYSPTSPGYSPTSPT-YSPAISPDDSDE 1969
Score = 106 bits (264), Expect = 1e-21
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1865 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTS 1924
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1925 PKYSPTSPTYSPTSPKGSTYSP 1946
Score = 105 bits (262), Expect = 2e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1851 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTS 1910
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1911 PKYSPTSPTYSPTS-PKYSP 1929
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1823 TPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTS 1882
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1883 PTYSPTTPKYSPTSPT-YSP 1901
Score = 102 bits (254), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1816 TPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS 1875
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP +T +Y+P
Sbjct: 1876 PKYSPTSPTYSP-TTPKYSP 1894
Score = 102 bits (253), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S
Sbjct: 1802 SPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTS 1861
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1862 PKYSPTSPKYSPTS-PKYSP 1880
Score = 99.4 bits (246), Expect = 1e-19
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1844 TPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS 1903
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S + Y+P
Sbjct: 1904 PTYTPTSPKYSPTSPT-YSP 1922
Score = 99.0 bits (245), Expect = 2e-19
Identities = 51/82 (62%), Positives = 61/82 (74%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPN--YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP Y P SP Y+P SP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP
Sbjct: 1597 SPTSPAYEPRSPGGGYTPQSPGYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1656
Query: 368 -STGYSPSQPGYSPSSTSQYTP 306
S YSP+ P YSP+S S Y+P
Sbjct: 1657 TSPSYSPTSPSYSPTSPS-YSP 1677
Score = 57.8 bits (138), Expect = 5e-07
Identities = 35/77 (45%), Positives = 44/77 (57%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
P+SPY P SP Y + + SP+YSP+SP Y P SP Y+P SP GY
Sbjct: 1574 PASPYIP-SPGY--ITLHFGALSPNYSPTSPAYEPRSPGGG-----YTPQSP------GY 1619
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 1620 SPTSPSYSPTSPS-YSP 1635
[65][TOP]
>UniRef100_UPI0001951285 220 kDa DNA-directed RNA polymerase polypeptide A n=1 Tax=Canis lupus
familiaris RepID=UPI0001951285
Length = 1969
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1623 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1682
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1683 PSYSPTSPSYSPTSPS-YSP 1701
Score = 113 bits (283), Expect = 8e-24
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1686 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1745
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS+P Y+P+S S Y+P
Sbjct: 1746 PNYSPSRPNYTPTSPS-YSP 1764
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1644 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1703
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1704 PSYSPTSPSYSPTSPS-YSP 1722
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1665 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1724
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1725 PSYSPTSPSYSPTSPS-YSP 1743
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1672 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1731
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1732 PSYSPTSPSYSPTSPN-YSP 1750
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS
Sbjct: 1693 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSR 1752
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1753 PNYTPTSPSYSPTSPS-YSP 1771
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1669 PSYSPTSPSYSPTSPS-YSP 1687
Score = 110 bits (275), Expect = 6e-23
Identities = 52/81 (64%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + +SP+YSP+SP S
Sbjct: 1735 SPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPNSPTSP 1794
Query: 362 GYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSPSS +YTPQ+
Sbjct: 1795 SYSPTSPSYSPSS-PRYTPQS 1814
Score = 107 bits (267), Expect = 5e-22
Identities = 52/79 (65%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSPS P + SP YSP+SP +SP S
Sbjct: 1714 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTS 1773
Query: 365 TGYSPSQPGYSPSSTSQYT 309
Y+P P YSP+S + T
Sbjct: 1774 PNYTPMSPNYSPTSPNSPT 1792
Score = 107 bits (267), Expect = 5e-22
Identities = 51/79 (64%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
SP+SP SPTSP+YSPTSPSYSP+SP Y+P SPTY+PSSP S SP YSP+SP+++P S
Sbjct: 1784 SPTSPNSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSP 1843
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSPS P Y+P+S +Y+P
Sbjct: 1844 SYSPSSPEYTPTS-PKYSP 1861
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 1860 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1919
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1920 PKYSPTSPTYSPTSPKGSTYSP 1941
Score = 105 bits (262), Expect = 2e-21
Identities = 55/87 (63%), Positives = 65/87 (74%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SPS P Y+PTSP+YSPTSPSYSPTSP+Y+P SP YSP+SP NS SP YSP+SP +SPS+
Sbjct: 1749 SPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP-NSPTSPSYSPTSPSYSPSS 1807
Query: 362 --------GYSPSQPGYSPSSTSQYTP 306
Y+PS P YSPSS S Y+P
Sbjct: 1808 PRYTPQSPTYTPSSPSYSPSSPS-YSP 1833
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 1818 TPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTS 1877
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1878 PTYSPTTPKYSPTSPT-YSP 1896
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 1846 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1905
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1906 PKYSPTSPTYSPTS-PKYSP 1924
Score = 103 bits (258), Expect = 6e-21
Identities = 55/80 (68%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSPN SPTSPSYSPTSPSYSPSSP Y+P SP + SP YSPSSP +SP S
Sbjct: 1777 TPMSPNYSPTSPN-SPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTS 1835
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSPSS +YTP
Sbjct: 1836 PKYTPTSPSYSPSS-PEYTP 1854
Score = 103 bits (256), Expect = 1e-20
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1874 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1933
Query: 365 ---TGYSPSQPGYSPSS 324
+ YSP+ PGYSP+S
Sbjct: 1934 PKGSTYSPTSPGYSPTS 1950
Score = 102 bits (254), Expect = 2e-20
Identities = 50/82 (60%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+P SP Y+P+SPSYSP+SPSYSP+SP Y+P+SP S SP+Y+P+SP++SP S
Sbjct: 1804 SPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS 1863
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSP+S + Y+P T
Sbjct: 1864 PKYSPTSPKYSPTSPT-YSPTT 1884
Score = 102 bits (254), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 1811 TPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS 1870
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP +T +Y+P
Sbjct: 1871 PKYSPTSPTYSP-TTPKYSP 1889
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 1839 TPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS 1898
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S + Y+P
Sbjct: 1899 PVYTPTSPKYSPTSPT-YSP 1917
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 417
PSSPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +S
Sbjct: 1888 SPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYS 1947
Query: 371 P-STGYSPSQPGYSPSSTSQ 315
P S YS + P SP + +
Sbjct: 1948 PTSPTYSLTSPAISPDDSDE 1967
Score = 58.9 bits (141), Expect = 2e-07
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP PSSPY +SP YSP+SP +
Sbjct: 1549 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYE 1601
Query: 371 PST--GYSPSQPGYSPSSTSQYTP 306
P + GY+P P YSP+S S Y+P
Sbjct: 1602 PRSPGGYTPQSPSYSPTSPS-YSP 1624
Score = 54.3 bits (129), Expect = 5e-06
Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGVSPDYSPSSPQFSPS 366
S S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS P + S
Sbjct: 1534 SVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPS-PGGAMS 1590
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P Y P S YTPQ+
Sbjct: 1591 PSYSPTSPAYEPRSPGGYTPQS 1612
[66][TOP]
>UniRef100_Q9BMP3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis
RepID=Q9BMP3_MONBE
Length = 1743
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSPNYSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1621 SPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTS 1680
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1681 PSYSPTSPNYSPTSPS-YSP 1699
Score = 111 bits (277), Expect = 4e-23
Identities = 57/95 (60%), Positives = 67/95 (70%), Gaps = 17/95 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
SP+SP YSPTSPNYSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP
Sbjct: 1649 SPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTS 1708
Query: 368 --------------STGYSPSQPGYSPSSTSQYTP 306
S GYSP+ PGYSP+S Y+P
Sbjct: 1709 PSYSPTANGTSGPTSPGYSPTSPGYSPTSPG-YSP 1742
Score = 110 bits (274), Expect = 8e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSP+SPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1607 SPTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTS 1666
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1667 PSYSPTSPNYSPTSPS-YSP 1685
Score = 109 bits (272), Expect = 1e-22
Identities = 53/80 (66%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP+YSPTSP+YSPTSPSYSP+SP YSP+SP S SP+YSP+SP +SP S
Sbjct: 1614 SPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTS 1673
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1674 PNYSPTSPSYSPTSPN-YSP 1692
Score = 109 bits (272), Expect = 1e-22
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP YSP+SP S SP+YSP+SP +SP S
Sbjct: 1642 SPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTS 1701
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP++ P
Sbjct: 1702 PNYSPTSPSYSPTANGTSGP 1721
Score = 108 bits (269), Expect = 3e-22
Identities = 54/88 (61%), Positives = 63/88 (71%), Gaps = 17/88 (19%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP YSP+SP S SP+YSP+SP +SP
Sbjct: 1656 SPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTA 1715
Query: 368 --------------STGYSPSQPGYSPS 327
S GYSP+ PGYSPS
Sbjct: 1716 NGTSGPTSPGYSPTSPGYSPTSPGYSPS 1743
Score = 95.9 bits (237), Expect = 2e-18
Identities = 50/89 (56%), Positives = 65/89 (73%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP---------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSP 390
SP+SP YSPTSP+YSP+SP+Y+ SP+YSP+SP+YSP+SP S SP YSP
Sbjct: 1556 SPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYSP 1615
Query: 389 SSPQFSPST-GYSPSQPGYSPSSTSQYTP 306
+SP +SPS+ YSP+ P YSP+S S Y+P
Sbjct: 1616 TSPGYSPSSPSYSPTSPNYSPTSPS-YSP 1643
Score = 92.0 bits (227), Expect = 2e-17
Identities = 54/97 (55%), Positives = 65/97 (67%), Gaps = 19/97 (19%)
Frame = -2
Query: 539 SPSSP--YSPTSPNYSPTSPSYSPTSPSY----SPSSP----TYSPSSPYNSGVSPDYSP 390
SP+SP ++PTSP+YSPTSPSYSPTSP+ SPS +YSPSSP + SP YSP
Sbjct: 1534 SPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSP 1593
Query: 389 SSPQFSP---------STGYSPSQPGYSPSSTSQYTP 306
+SP +SP S GYSP+ PGYSPSS S Y+P
Sbjct: 1594 TSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPS-YSP 1629
Score = 90.1 bits (222), Expect = 9e-17
Identities = 50/89 (56%), Positives = 61/89 (68%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSP--------TSPSYSPSSPTYSPSSPYNSGV-SPDYSP 390
SP+SP YSPTSP SPTSP +SP TSP YSP+SP+YSP+SP G SP YSP
Sbjct: 1513 SPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYSP 1572
Query: 389 SSPQFSPST-GYSPSQPGYSPSSTSQYTP 306
+SP +SPS+ Y+ P YSP+S S Y+P
Sbjct: 1573 TSPSYSPSSPAYNAQSPAYSPTSPS-YSP 1600
Score = 88.6 bits (218), Expect = 3e-16
Identities = 52/84 (61%), Positives = 61/84 (72%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSY-SPSSPTYSPSSPYNSGV---SPDYSPSSPQF 375
SPSSP Y+ SP YSPTSPSYSPTSP+ SP+SP YSP+SP G SP YSP+SP +
Sbjct: 1578 SPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYSPTSP---GYSPSSPSYSPTSPNY 1634
Query: 374 SP-STGYSPSQPGYSPSSTSQYTP 306
SP S YSP+ P YSP+S S Y+P
Sbjct: 1635 SPTSPSYSPTSPNYSPTSPS-YSP 1657
Score = 70.1 bits (170), Expect = 1e-10
Identities = 38/72 (52%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSPYNSGVSPDYSPSSPQ-FSP-STG 360
SP SP SP Y P+SP+ YSP+SP+YSP+SP S SP +SP+SP F+P S
Sbjct: 1488 SPGGAMSPGVVSASPFYDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPH 1547
Query: 359 YSPSQPGYSPSS 324
YSP+ P YSP+S
Sbjct: 1548 YSPTSPSYSPTS 1559
Score = 53.9 bits (128), Expect = 7e-06
Identities = 35/82 (42%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSP---TSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP SP SP + SP SP +SP Y PSSP YSP+SP +SP
Sbjct: 1469 SPGGMLSPGGIAQSPGG-AMSPGGAMSPGVVSASPFYDPSSPAG------YSPTSPSYSP 1521
Query: 368 -STGYSPSQPGYSPSSTSQYTP 306
S G SP+ PG+SP+S + +TP
Sbjct: 1522 TSPGMSPTSPGFSPASPAGFTP 1543
[67][TOP]
>UniRef100_B7PJA3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixodes scapularis
RepID=B7PJA3_IXOSC
Length = 1937
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1622 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1681
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1682 PSYSPTSPSYSPTSPS-YSP 1700
Score = 114 bits (284), Expect = 6e-24
Identities = 58/88 (65%), Positives = 68/88 (77%), Gaps = 8/88 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
+P+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSPSSP S SP YSP SP +SPS+
Sbjct: 1727 TPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPSYSPSS 1786
Query: 362 -GYSPSQPGYSPSSTS------QYTPQT 300
YSP+ P YSP+S S QYTP +
Sbjct: 1787 PKYSPTSPSYSPTSPSYSPGSPQYTPSS 1814
Score = 113 bits (283), Expect = 8e-24
Identities = 56/82 (68%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1643 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1702
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSP+S S Y+P +
Sbjct: 1703 PSYSPTSPSYSPTSPS-YSPSS 1723
Score = 113 bits (283), Expect = 8e-24
Identities = 56/82 (68%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSPSSP + SP YSP+SP +SP S
Sbjct: 1685 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPTS 1744
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSP+S S Y+P +
Sbjct: 1745 PSYSPTSPSYSPTSPS-YSPSS 1765
Score = 112 bits (281), Expect = 1e-23
Identities = 55/80 (68%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1664 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSS 1723
Query: 362 -GYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1724 PNYTPASPSYSPTSPS-YSP 1742
Score = 111 bits (277), Expect = 4e-23
Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SPNY+P SPSYSPTSPSYSP+SP+YSP+SP S SP YSPSSP +SP S
Sbjct: 1713 SPTSPSYSPSSPNYTPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYSPQS 1772
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP P YSPSS +Y+P
Sbjct: 1773 PSYSPGSPSYSPSS-PKYSP 1791
Score = 110 bits (276), Expect = 5e-23
Identities = 54/80 (67%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1608 TPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1667
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1668 PSYSPTSPSYSPTSPS-YSP 1686
Score = 109 bits (272), Expect = 1e-22
Identities = 55/82 (67%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP SP YSP+SP YSPTSPSYSPTSPSYSP SP Y+PSSP S SP YSP+SP +SPS+
Sbjct: 1776 SPGSPSYSPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSPTSPSYSPSS 1835
Query: 362 -GYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSP+S + YTP +
Sbjct: 1836 PKYSPTSPKYSPTSPT-YTPSS 1856
Score = 109 bits (272), Expect = 1e-22
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSP+SP YSPTSP YSP+SPTY+PSSP S SP YSP+SPQ+SP S
Sbjct: 1818 SPTSPTYSPTSPSYSPSSPKYSPTSPKYSPTSPTYTPSSPKYSPTSPQYSPTSPQYSPTS 1877
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1878 PKYSPTSPKYSPTSPT-YSP 1896
Score = 108 bits (271), Expect = 2e-22
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 5/83 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
+PSSP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1853 TPSSPKYSPTSPQYSPTSPQYSPTSPKYSPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 1912
Query: 365 ---TGYSPSQPGYSPSSTSQYTP 306
+ YSP+ PGYSPSS + Y+P
Sbjct: 1913 PKGSSYSPTSPGYSPSSPT-YSP 1934
Score = 107 bits (268), Expect = 4e-22
Identities = 52/82 (63%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSP+SP+Y+P SPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1706 SPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSS 1765
Query: 362 -GYSPSQPGYSPSSTSQYTPQT 300
YSP P YSP S S Y+P +
Sbjct: 1766 PNYSPQSPSYSPGSPS-YSPSS 1786
Score = 106 bits (264), Expect = 1e-21
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+PSSP +P SP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1601 APSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1660
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1661 PSYSPTSPSYSPTSPS-YSP 1679
Score = 106 bits (264), Expect = 1e-21
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP SP Y+P+SP YSPTSP+YSPTSPSYSPSSP YSP+SP S SP Y+PSSP++SP S
Sbjct: 1804 SPGSPQYTPSSPKYSPTSPTYSPTSPSYSPSSPKYSPTSPKYSPTSPTYTPSSPKYSPTS 1863
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1864 PQYSPTSPQYSPTS-PKYSP 1882
Score = 104 bits (260), Expect = 3e-21
Identities = 51/81 (62%), Positives = 64/81 (79%), Gaps = 3/81 (3%)
Frame = -2
Query: 539 SPSSPY--SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP- 369
SP+SPY SP SPNYSP+SP+Y+P+SPS +P+SPTYSP+SP S SP YSP+SP +SP
Sbjct: 1579 SPASPYIPSPVSPNYSPSSPAYAPSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPNYSPT 1638
Query: 368 STGYSPSQPGYSPSSTSQYTP 306
S YSP+ P YSP+S S Y+P
Sbjct: 1639 SPSYSPTSPSYSPTSPS-YSP 1658
Score = 104 bits (260), Expect = 3e-21
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSP SP+YSP SPSYSP+SP YSP+SP+YSP+SP S SP Y+PSSP++SP S
Sbjct: 1762 SPSSPNYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTS 1821
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSPSS +Y+P
Sbjct: 1822 PTYSPTSPSYSPSS-PKYSP 1840
Score = 104 bits (259), Expect = 5e-21
Identities = 51/80 (63%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+P+SP+ +P SP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1594 SPSSPAYAPSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTS 1653
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1654 PSYSPTSPSYSPTSPS-YSP 1672
Score = 103 bits (257), Expect = 8e-21
Identities = 52/80 (65%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP SP YSP SP+YSP+SP YSPTSPSYSP+SP+YSP SP + SP YSP+SP +SP S
Sbjct: 1769 SPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSPTS 1828
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS P YSP+S +Y+P
Sbjct: 1829 PSYSPSSPKYSPTS-PKYSP 1847
Score = 103 bits (257), Expect = 8e-21
Identities = 52/82 (63%), Positives = 62/82 (75%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP Y+P+SP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1839 SPTSPKYSPTSPTYTPSSPKYSPTSPQYSPTSPQYSPTSPKYSPTSPKYSPTSPTYSPTS 1898
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1899 PKYSPTSPTYSPTSPKGSSYSP 1920
Score = 97.4 bits (241), Expect = 6e-19
Identities = 55/87 (63%), Positives = 65/87 (74%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSS 384
SPSSP YSPTSP+YSPTSPSYSP SP Y+ P+SPTYSP+SP S SP YSP+S
Sbjct: 1783 SPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSPTSPSYSPSSPKYSPTS 1842
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P++SP S Y+PS P YSP+S QY+P
Sbjct: 1843 PKYSPTSPTYTPSSPKYSPTS-PQYSP 1868
Score = 95.9 bits (237), Expect = 2e-18
Identities = 50/76 (65%), Positives = 56/76 (73%), Gaps = 4/76 (5%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP---DYSPSSPQFS 372
SP+SP YSPTSP YSPTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1867 SPTSPQYSPTSPKYSPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSSYSPTSP--- 1923
Query: 371 PSTGYSPSQPGYSPSS 324
GYSPS P YSP+S
Sbjct: 1924 ---GYSPSSPTYSPTS 1936
Score = 80.1 bits (196), Expect = 9e-14
Identities = 40/57 (70%), Positives = 46/57 (80%), Gaps = 4/57 (7%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP---TYSPSSPYNSGVSPDYSPSSP 381
SP+SP YSPTSP YSPTSP YSPTSP+YSP+SP +YSP+SP S SP YSP+SP
Sbjct: 1881 SPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSSYSPTSPGYSPSSPTYSPTSP 1937
Score = 73.2 bits (178), Expect = 1e-11
Identities = 44/96 (45%), Positives = 54/96 (56%), Gaps = 18/96 (18%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYS-----------------PTSPSYSPSSPTYSPSSPYNSG 411
S +S YSP S SP +S P SP+YSPSSP Y+PSSP +
Sbjct: 1553 SDASGYSPASAGLSP---GWSPQPGSPASSPASPYIPSPVSPNYSPSSPAYAPSSPSMTP 1609
Query: 410 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1610 ASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPS-YSP 1644
[68][TOP]
>UniRef100_A9V5W6 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis
RepID=A9V5W6_MONBE
Length = 1307
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSPNYSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1185 SPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTS 1244
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1245 PSYSPTSPNYSPTSPS-YSP 1263
Score = 111 bits (277), Expect = 4e-23
Identities = 57/95 (60%), Positives = 67/95 (70%), Gaps = 17/95 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
SP+SP YSPTSPNYSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP
Sbjct: 1213 SPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTS 1272
Query: 368 --------------STGYSPSQPGYSPSSTSQYTP 306
S GYSP+ PGYSP+S Y+P
Sbjct: 1273 PSYSPTANGTSGPTSPGYSPTSPGYSPTSPG-YSP 1306
Score = 110 bits (274), Expect = 8e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSP+SPSYSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1171 SPTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTS 1230
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1231 PSYSPTSPNYSPTSPS-YSP 1249
Score = 109 bits (272), Expect = 1e-22
Identities = 53/80 (66%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP+YSPTSP+YSPTSPSYSP+SP YSP+SP S SP+YSP+SP +SP S
Sbjct: 1178 SPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTS 1237
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1238 PNYSPTSPSYSPTSPN-YSP 1256
Score = 109 bits (272), Expect = 1e-22
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP YSP+SP S SP+YSP+SP +SP S
Sbjct: 1206 SPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTS 1265
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP++ P
Sbjct: 1266 PNYSPTSPSYSPTANGTSGP 1285
Score = 108 bits (269), Expect = 3e-22
Identities = 54/88 (61%), Positives = 63/88 (71%), Gaps = 17/88 (19%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP YSP+SP S SP+YSP+SP +SP
Sbjct: 1220 SPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTA 1279
Query: 368 --------------STGYSPSQPGYSPS 327
S GYSP+ PGYSPS
Sbjct: 1280 NGTSGPTSPGYSPTSPGYSPTSPGYSPS 1307
Score = 95.9 bits (237), Expect = 2e-18
Identities = 50/89 (56%), Positives = 65/89 (73%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP---------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSP 390
SP+SP YSPTSP+YSP+SP+Y+ SP+YSP+SP+YSP+SP S SP YSP
Sbjct: 1120 SPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYSP 1179
Query: 389 SSPQFSPST-GYSPSQPGYSPSSTSQYTP 306
+SP +SPS+ YSP+ P YSP+S S Y+P
Sbjct: 1180 TSPGYSPSSPSYSPTSPNYSPTSPS-YSP 1207
Score = 92.0 bits (227), Expect = 2e-17
Identities = 54/97 (55%), Positives = 65/97 (67%), Gaps = 19/97 (19%)
Frame = -2
Query: 539 SPSSP--YSPTSPNYSPTSPSYSPTSPSY----SPSSP----TYSPSSPYNSGVSPDYSP 390
SP+SP ++PTSP+YSPTSPSYSPTSP+ SPS +YSPSSP + SP YSP
Sbjct: 1098 SPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSP 1157
Query: 389 SSPQFSP---------STGYSPSQPGYSPSSTSQYTP 306
+SP +SP S GYSP+ PGYSPSS S Y+P
Sbjct: 1158 TSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPS-YSP 1193
Score = 90.1 bits (222), Expect = 9e-17
Identities = 50/89 (56%), Positives = 61/89 (68%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSP--------TSPSYSPSSPTYSPSSPYNSGV-SPDYSP 390
SP+SP YSPTSP SPTSP +SP TSP YSP+SP+YSP+SP G SP YSP
Sbjct: 1077 SPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYSP 1136
Query: 389 SSPQFSPST-GYSPSQPGYSPSSTSQYTP 306
+SP +SPS+ Y+ P YSP+S S Y+P
Sbjct: 1137 TSPSYSPSSPAYNAQSPAYSPTSPS-YSP 1164
Score = 88.6 bits (218), Expect = 3e-16
Identities = 52/84 (61%), Positives = 61/84 (72%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSY-SPSSPTYSPSSPYNSGV---SPDYSPSSPQF 375
SPSSP Y+ SP YSPTSPSYSPTSP+ SP+SP YSP+SP G SP YSP+SP +
Sbjct: 1142 SPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYSPTSP---GYSPSSPSYSPTSPNY 1198
Query: 374 SP-STGYSPSQPGYSPSSTSQYTP 306
SP S YSP+ P YSP+S S Y+P
Sbjct: 1199 SPTSPSYSPTSPNYSPTSPS-YSP 1221
Score = 70.1 bits (170), Expect = 1e-10
Identities = 38/72 (52%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSPYNSGVSPDYSPSSPQ-FSP-STG 360
SP SP SP Y P+SP+ YSP+SP+YSP+SP S SP +SP+SP F+P S
Sbjct: 1052 SPGGAMSPGVVSASPFYDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPH 1111
Query: 359 YSPSQPGYSPSS 324
YSP+ P YSP+S
Sbjct: 1112 YSPTSPSYSPTS 1123
Score = 53.9 bits (128), Expect = 7e-06
Identities = 35/82 (42%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSP---TSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP SP SP + SP SP +SP Y PSSP YSP+SP +SP
Sbjct: 1033 SPGGMLSPGGIAQSPGG-AMSPGGAMSPGVVSASPFYDPSSPAG------YSPTSPSYSP 1085
Query: 368 -STGYSPSQPGYSPSSTSQYTP 306
S G SP+ PG+SP+S + +TP
Sbjct: 1086 TSPGMSPTSPGFSPASPAGFTP 1107
[69][TOP]
>UniRef100_A8PU11 DNA-directed RNA polymerase n=1 Tax=Brugia malayi RepID=A8PU11_BRUMA
Length = 1943
Score = 115 bits (287), Expect = 3e-24
Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1691 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTS 1750
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ PGYSPSS +Y+P
Sbjct: 1751 PSYSPASPGYSPSS-PRYSP 1769
Score = 114 bits (286), Expect = 3e-24
Identities = 58/82 (70%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP YSPTSP+YSPTSP+YSP+SPTYSP+SP S SP YSPSSP++SP S
Sbjct: 1761 SPSSPRYSPTSPAYSPTSPTYSPTSPAYSPTSPTYSPTSPSYSPASPGYSPSSPRYSPTS 1820
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSPSS QY+P +
Sbjct: 1821 PTYSPTSPAYSPSS-PQYSPSS 1841
Score = 114 bits (284), Expect = 6e-24
Identities = 59/82 (71%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP YSPTSP+YSPTSPSYSP+SP YSPSSP S SP YSP+SP +SPS+
Sbjct: 1775 SPTSPTYSPTSPAYSPTSPTYSPTSPSYSPASPGYSPSSPRYSPTSPTYSPTSPAYSPSS 1834
Query: 362 -GYSPSQPGYSPSSTSQYTPQT 300
YSPS P YSPSS QYTP +
Sbjct: 1835 PQYSPSSPQYSPSS-PQYTPSS 1855
Score = 110 bits (276), Expect = 5e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSPSSP++SP S
Sbjct: 1712 SPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPASPGYSPSSPRYSPTS 1771
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1772 PAYSPTSPTYSPTSPA-YSP 1790
Score = 108 bits (271), Expect = 2e-22
Identities = 56/87 (64%), Positives = 64/87 (73%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
SP+SP YSPTSP+YSPTSPSYSP SP YSPSSP YSP+SP S SP YSP+SP +SP
Sbjct: 1733 SPTSPSYSPTSPSYSPTSPSYSPASPGYSPSSPRYSPTSPAYSPTSPTYSPTSPAYSPTS 1792
Query: 368 ------STGYSPSQPGYSPSSTSQYTP 306
S YSP+ PGYSPSS +Y+P
Sbjct: 1793 PTYSPTSPSYSPASPGYSPSS-PRYSP 1818
Score = 107 bits (266), Expect = 7e-22
Identities = 53/81 (65%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSP+SP YSPTSP+YSPTSP+YSPSSP YSPSSP S SP Y+PSSP S
Sbjct: 1803 SPASPGYSPSSPRYSPTSPTYSPTSPAYSPSSPQYSPSSPQYSPSSPQYTPSSPAGDASP 1862
Query: 362 GYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSPSS +Y+P +
Sbjct: 1863 AYSPTSPQYSPSS-PRYSPSS 1882
Score = 105 bits (262), Expect = 2e-21
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 13/91 (14%)
Frame = -2
Query: 539 SPSSP-------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVS-----PDY 396
+PSSP YSPTSP YSP+SP YSP+SP YSP+SP YSPSSP +G S P Y
Sbjct: 1852 TPSSPAGDASPAYSPTSPQYSPSSPRYSPSSPQYSPTSPQYSPSSPGGAGTSYSRSSPQY 1911
Query: 395 SPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 306
SPSSPQ+SPS+ YSPS P YSPSS QY+P
Sbjct: 1912 SPSSPQYSPSSPQYSPSSPQYSPSS-PQYSP 1941
Score = 103 bits (257), Expect = 8e-21
Identities = 50/79 (63%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
SP+SPY +SP Y SP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1671 SPASPYGASSPAYGVMSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1730
Query: 362 GYSPSQPGYSPSSTSQYTP 306
GYSP+ P YSP+S S Y+P
Sbjct: 1731 GYSPTSPSYSPTSPS-YSP 1748
Score = 99.0 bits (245), Expect = 2e-19
Identities = 58/100 (58%), Positives = 66/100 (66%), Gaps = 20/100 (20%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPS------YSPTSPSYSPSSPTYSPSSPYNSGVSPDYSP--- 390
SPSSP YSP+SP Y+P+SP+ YSPTSP YSPSSP YSPSSP S SP YSP
Sbjct: 1838 SPSSPQYSPSSPQYTPSSPAGDASPAYSPTSPQYSPSSPRYSPSSPQYSPTSPQYSPSSP 1897
Query: 389 ---------SSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 300
SSPQ+SPS+ YSPS P YSPSS QY+P +
Sbjct: 1898 GGAGTSYSRSSPQYSPSSPQYSPSSPQYSPSS-PQYSPSS 1936
Score = 98.6 bits (244), Expect = 2e-19
Identities = 57/101 (56%), Positives = 64/101 (63%), Gaps = 22/101 (21%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------------------ 417
SPSSP YSPTSP YSPTSP+YSP+SP YSPSSP YSPSSP
Sbjct: 1810 SPSSPRYSPTSPTYSPTSPAYSPSSPQYSPSSPQYSPSSPQYTPSSPAGDASPAYSPTSP 1869
Query: 416 --SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQ 303
S SP YSPSSPQ+SP S YSPS PG + +S S+ +PQ
Sbjct: 1870 QYSPSSPRYSPSSPQYSPTSPQYSPSSPGGAGTSYSRSSPQ 1910
Score = 89.7 bits (221), Expect = 1e-16
Identities = 48/80 (60%), Positives = 58/80 (72%), Gaps = 4/80 (5%)
Frame = -2
Query: 533 SSP-YSPTSPN--YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SSP YSPTSP Y +SP+Y SP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1663 SSPGYSPTSPASPYGASSPAYGVMSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1722
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ PGYSP+S S Y+P
Sbjct: 1723 PSYSPTSPGYSPTSPS-YSP 1741
Score = 73.9 bits (180), Expect = 7e-12
Identities = 42/86 (48%), Positives = 52/86 (60%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSP-----TSPSYSPTSPS--YSPSSPTYSPSSPYNSGVSPDYSPSSP 381
S + YSP + +Y +SP YSPTSP+ Y SSP Y SP S SP YSP+SP
Sbjct: 1643 SGAGAYSPAASDYGSGLEGLSSPGYSPTSPASPYGASSPAYGVMSPRYSPTSPSYSPTSP 1702
Query: 380 QFSP-STGYSPSQPGYSPSSTSQYTP 306
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1703 SYSPTSPSYSPTSPSYSPTSPS-YSP 1727
[70][TOP]
>UniRef100_A5DCV3 DNA-directed RNA polymerase II subunit RPB1 (Fragments) n=1
Tax=Pichia guilliermondii RepID=RPB1_PICGU
Length = 1579
Score = 115 bits (287), Expect = 3e-24
Identities = 60/96 (62%), Positives = 73/96 (76%), Gaps = 10/96 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1484 SPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTS 1543
Query: 365 TGYSPSQPGYSPSSTSQYTP--------QTNDKDER 282
YSP+ P YSP+S QY+P Q +DKD++
Sbjct: 1544 PAYSPTSPQYSPNS-PQYSPRSPLYSPDQNDDKDKK 1578
Score = 114 bits (284), Expect = 6e-24
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1463 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTS 1522
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1523 PSYSPTSPSYSPTS-PQYSP 1541
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1400 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1459
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1460 PSYSPTSPSYSPTSPS-YSP 1478
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1421 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1480
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1481 PSYSPTSPSYSPTSPS-YSP 1499
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP++
Sbjct: 1442 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1501
Query: 362 G-YSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1502 PLYSPTSPSYSPTSPS-YSP 1520
Score = 109 bits (273), Expect = 1e-22
Identities = 53/77 (68%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1382 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1441
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 1442 SPTSPSYSPTSPS-YSP 1457
Score = 103 bits (258), Expect = 6e-21
Identities = 51/77 (66%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S Y TSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1375 SPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1434
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 1435 SPTSPSYSPTSPS-YSP 1450
Score = 96.7 bits (239), Expect = 9e-19
Identities = 50/88 (56%), Positives = 60/88 (68%), Gaps = 10/88 (11%)
Frame = -2
Query: 539 SPSSP---------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 387
SP+SP Y SP Y TSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+
Sbjct: 1357 SPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1416
Query: 386 SPQFSP-STGYSPSQPGYSPSSTSQYTP 306
SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1417 SPSYSPTSPSYSPTSPSYSPTSPS-YSP 1443
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/79 (58%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Frame = -2
Query: 536 PSSPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
P SP SPTSP Y TSP+Y SP Y +SPTYSP+SP S SP YSP+SP +SP S
Sbjct: 1353 PGSP-SPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSP 1411
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1412 SYSPTSPSYSPTSPS-YSP 1429
[71][TOP]
>UniRef100_Q6FQS9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
RepID=Q6FQS9_CANGA
Length = 1715
Score = 114 bits (286), Expect = 3e-24
Identities = 58/88 (65%), Positives = 71/88 (80%), Gaps = 2/88 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1628 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1687
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDKDER 282
YSP+ P YSP S + Y+P+ D+DE+
Sbjct: 1688 PSYSPTSPSYSPGSPT-YSPK--DEDEK 1712
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1544 SPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1603
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1604 PSYSPTSPSYSPTSPS-YSP 1622
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1565 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1624
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1625 PSYSPTSPSYSPTSPS-YSP 1643
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1586 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1645
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1646 PSYSPTSPSYSPTSPS-YSP 1664
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1607 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1666
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1667 PSYSPTSPSYSPTSPS-YSP 1685
Score = 107 bits (267), Expect = 5e-22
Identities = 54/78 (69%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = -2
Query: 533 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 360
SSP +SPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1539 SSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1598
Query: 359 YSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1599 YSPTSPSYSPTSPS-YSP 1615
[72][TOP]
>UniRef100_B5RSM9 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
RepID=B5RSM9_DEBHA
Length = 1749
Score = 114 bits (286), Expect = 3e-24
Identities = 58/90 (64%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1657 SPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTS 1716
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDKDERGK 276
YSP+ P YSP S S Y+P++ K + K
Sbjct: 1717 PQYSPTSPQYSPGSPS-YSPESESKSKDEK 1745
Score = 114 bits (285), Expect = 4e-24
Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1629 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTS 1688
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1689 PQYSPTSPSYSPTSPS-YSP 1707
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1573 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1632
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1633 PSYSPTSPSYSPTSPS-YSP 1651
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1594 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1653
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1654 PSYSPTSPSYSPTSPS-YSP 1672
Score = 112 bits (281), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1615 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1674
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1675 PSYSPTSPQYSPTS-PQYSP 1693
Score = 112 bits (279), Expect = 2e-23
Identities = 59/97 (60%), Positives = 71/97 (73%), Gaps = 11/97 (11%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1650 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTS 1709
Query: 365 TGYSPSQPGYSPSSTSQYTP---------QTNDKDER 282
YSP+ P YSP+S QY+P ++ KDE+
Sbjct: 1710 PQYSPTSPQYSPTS-PQYSPGSPSYSPESESKSKDEK 1745
Score = 109 bits (273), Expect = 1e-22
Identities = 53/77 (68%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1555 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1614
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 1615 SPTSPSYSPTSPS-YSP 1630
Score = 104 bits (260), Expect = 3e-21
Identities = 52/83 (62%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ
Sbjct: 1671 SPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQ----- 1725
Query: 362 GYSPSQPGYSPSSTSQYTPQTND 294
YSP P YSP S S+ + D
Sbjct: 1726 -YSPGSPSYSPESESKSKDEKKD 1747
Score = 103 bits (258), Expect = 6e-21
Identities = 51/77 (66%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S Y TSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1548 SPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1607
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 1608 SPTSPSYSPTSPS-YSP 1623
Score = 102 bits (254), Expect = 2e-20
Identities = 56/87 (64%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP +YSP+SP S SP YSP+S
Sbjct: 1601 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1660
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P +SP S YSP+ P YSP+S QY+P
Sbjct: 1661 PSYSPTSPSYSPTSPSYSPTS-PQYSP 1686
Score = 98.2 bits (243), Expect = 3e-19
Identities = 51/89 (57%), Positives = 62/89 (69%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSPYS----------PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSP 390
SP+SP+S TSP Y TSP+YSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1529 SPTSPFSYGATSPSFGGVTSPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1588
Query: 389 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1589 TSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1616
[73][TOP]
>UniRef100_A3GID7 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
RepID=A3GID7_PICST
Length = 1739
Score = 114 bits (286), Expect = 3e-24
Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1635 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTS 1694
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1695 PQYSPTSPSYSPTS-PQYSP 1713
Score = 114 bits (284), Expect = 6e-24
Identities = 58/87 (66%), Positives = 68/87 (78%), Gaps = 4/87 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1649 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTS 1708
Query: 365 TGYSPSQPGYSPSST--SQYTPQTNDK 291
YSP+ P YSP S S +P+T DK
Sbjct: 1709 PQYSPTSPQYSPGSPEYSPNSPKTEDK 1735
Score = 113 bits (283), Expect = 8e-24
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1614 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1673
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1674 PSYSPTSPSYSPTS-PQYSP 1692
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1572 SPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1631
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1632 PSYSPTSPSYSPTSPS-YSP 1650
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1593 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1652
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1653 PSYSPTSPSYSPTSPS-YSP 1671
Score = 112 bits (279), Expect = 2e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1565 SPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1624
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1625 PSYSPTSPSYSPTSPS-YSP 1643
Score = 109 bits (272), Expect = 1e-22
Identities = 53/77 (68%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1547 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1606
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 1607 SPTSPSYSPTSPS-YSP 1622
Score = 105 bits (261), Expect = 3e-21
Identities = 52/79 (65%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
S S Y TSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1538 SVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSP 1597
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1598 SYSPTSPSYSPTSPS-YSP 1615
Score = 85.9 bits (211), Expect = 2e-15
Identities = 51/94 (54%), Positives = 61/94 (64%), Gaps = 17/94 (18%)
Frame = -2
Query: 536 PSSPYSPTSP-NYSP---------------TSPSYSPTSPSYSPSSPTYSPSSPYNSGVS 405
P+SP S TSP +Y TSPSYSPTSPSYSP+SP+YSP+SP S S
Sbjct: 1517 PTSP-SATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1575
Query: 404 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
P YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1576 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1608
Score = 85.5 bits (210), Expect = 2e-15
Identities = 46/82 (56%), Positives = 59/82 (71%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSPYS--PTSPNYSPT-SPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
S +SP+S TSP++ + SP Y TSPSYSP+SP+YSP+SP S SP YSP+SP +SP
Sbjct: 1521 SATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSP 1580
Query: 368 -STGYSPSQPGYSPSSTSQYTP 306
S YSP+ P YSP+S S Y+P
Sbjct: 1581 TSPSYSPTSPSYSPTSPS-YSP 1601
Score = 60.8 bits (146), Expect = 6e-08
Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Frame = -2
Query: 515 TSPNYSPTSPSYSPTSP-SYSPSSPTYSPS-SPYNSGVSPDYSPSSPQFSP-STGYSPSQ 345
TS PTSPS TSP SY +SP++ S SP G SP YSP+SP +SP S YSP+
Sbjct: 1511 TSYGGQPTSPS--ATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTS 1568
Query: 344 PGYSPSSTSQYTP 306
P YSP+S + Y+P
Sbjct: 1569 PSYSPTSPA-YSP 1580
[74][TOP]
>UniRef100_UPI00003BD271 hypothetical protein DEHA0A14036g n=1 Tax=Debaryomyces hansenii
CBS767 RepID=UPI00003BD271
Length = 1749
Score = 114 bits (285), Expect = 4e-24
Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1629 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTS 1688
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1689 PQYSPTSPSYSPTSPS-YSP 1707
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1573 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1632
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1633 PSYSPTSPSYSPTSPS-YSP 1651
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1594 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1653
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1654 PSYSPTSPSYSPTSPS-YSP 1672
Score = 112 bits (281), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1615 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1674
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1675 PSYSPTSPQYSPTS-PQYSP 1693
Score = 112 bits (280), Expect = 2e-23
Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1657 SPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTS 1716
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDKDERGK 276
YSP+ P YSP S Y+P++ K + K
Sbjct: 1717 PQYSPTSPQYSPGS-PLYSPESESKSKDEK 1745
Score = 112 bits (279), Expect = 2e-23
Identities = 59/97 (60%), Positives = 71/97 (73%), Gaps = 11/97 (11%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1650 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTS 1709
Query: 365 TGYSPSQPGYSPSSTSQYTP---------QTNDKDER 282
YSP+ P YSP+S QY+P ++ KDE+
Sbjct: 1710 PQYSPTSPQYSPTS-PQYSPGSPLYSPESESKSKDEK 1745
Score = 109 bits (273), Expect = 1e-22
Identities = 53/77 (68%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1555 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1614
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 1615 SPTSPSYSPTSPS-YSP 1630
Score = 103 bits (258), Expect = 6e-21
Identities = 51/77 (66%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S Y TSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1548 SPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1607
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 1608 SPTSPSYSPTSPS-YSP 1623
Score = 103 bits (256), Expect = 1e-20
Identities = 52/83 (62%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ
Sbjct: 1671 SPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQ----- 1725
Query: 362 GYSPSQPGYSPSSTSQYTPQTND 294
YSP P YSP S S+ + D
Sbjct: 1726 -YSPGSPLYSPESESKSKDEKKD 1747
Score = 102 bits (254), Expect = 2e-20
Identities = 56/87 (64%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP +YSP+SP S SP YSP+S
Sbjct: 1601 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1660
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P +SP S YSP+ P YSP+S QY+P
Sbjct: 1661 PSYSPTSPSYSPTSPSYSPTS-PQYSP 1686
Score = 98.2 bits (243), Expect = 3e-19
Identities = 51/89 (57%), Positives = 62/89 (69%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSPYS----------PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSP 390
SP+SP+S TSP Y TSP+YSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1529 SPTSPFSYGATSPSFGGVTSPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1588
Query: 389 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1589 TSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1616
[75][TOP]
>UniRef100_A9U396 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9U396_PHYPA
Length = 1742
Score = 114 bits (285), Expect = 4e-24
Identities = 56/82 (68%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y+P+SP +SP S
Sbjct: 1621 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYAPTSPAYSPTS 1680
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ PGYSP+S S Y+P +
Sbjct: 1681 PSYSPTSPGYSPTSPS-YSPSS 1701
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+Y+P+SP S SP YSP+SP +SP S
Sbjct: 1579 SPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTS 1638
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1639 PSYSPTSPSYSPTSPS-YSP 1657
Score = 110 bits (275), Expect = 6e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSY+P+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1586 SPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1645
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1646 PSYSPTSPSYSPTSPA-YSP 1664
Score = 110 bits (274), Expect = 8e-23
Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP + SP YSP+SP +SP S
Sbjct: 1572 SPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTS 1631
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1632 PSYSPTSPSYSPTSPS-YSP 1650
Score = 109 bits (273), Expect = 1e-22
Identities = 53/80 (66%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1600 SPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1659
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S + Y+P
Sbjct: 1660 PAYSPTSPSYAPTSPA-YSP 1678
Score = 109 bits (273), Expect = 1e-22
Identities = 54/82 (65%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSY+PTSP+YSP+SP+YSP+SP S SP YSPSSP +SP S
Sbjct: 1649 SPTSPSYSPTSPAYSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTS 1708
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSP+S +Y+P +
Sbjct: 1709 PSYSPTSPAYSPTS-PRYSPSS 1729
Score = 108 bits (271), Expect = 2e-22
Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP YSPTSPSYSP+SP YSP+SP S SP Y+P+SP +SP S
Sbjct: 1565 SPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTS 1624
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1625 PSYSPTSPSYSPTSPS-YSP 1643
Score = 107 bits (266), Expect = 7e-22
Identities = 54/80 (67%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSP+SP YSP SP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1537 SPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTS 1596
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
GYSP+ P YSP+S S Y P
Sbjct: 1597 PGYSPTSPSYSPTSPS-YAP 1615
Score = 105 bits (263), Expect = 2e-21
Identities = 53/80 (66%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1551 SPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTS 1610
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1611 PSYAPTSPSYSPTSPS-YSP 1629
Score = 105 bits (261), Expect = 3e-21
Identities = 53/80 (66%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSP SP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1544 SPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTS 1603
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S S Y+P
Sbjct: 1604 PSYSPTSPSYAPTSPS-YSP 1622
Score = 103 bits (257), Expect = 8e-21
Identities = 49/70 (70%), Positives = 59/70 (84%), Gaps = 2/70 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
+P+SP YSPTSP+YSPTSP YSPTSPSYSPSSP+YSP+SP S SP YSP+SP++SPS+
Sbjct: 1670 APTSPAYSPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSPSYSPTSPAYSPTSPRYSPSS 1729
Query: 362 -GYSPSQPGY 336
YSP+ P Y
Sbjct: 1730 PSYSPTSPSY 1739
Score = 102 bits (253), Expect = 2e-20
Identities = 56/87 (64%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP + SP YSP+SP +SP S
Sbjct: 1628 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYAPTSPAYSPTSPSYSPTS 1687
Query: 365 TGYSPSQP-------GYSPSSTSQYTP 306
GYSP+ P YSP+S S Y+P
Sbjct: 1688 PGYSPTSPSYSPSSPSYSPTSPS-YSP 1713
Score = 100 bits (250), Expect = 5e-20
Identities = 48/75 (64%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Frame = -2
Query: 527 PYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSP 351
P+SP+SP YSP+SP YSP SP YSP+SP YSP+SP S SP YSP+SP +SP S YSP
Sbjct: 1535 PFSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSP 1594
Query: 350 SQPGYSPSSTSQYTP 306
+ PGYSP+S S Y+P
Sbjct: 1595 TSPGYSPTSPS-YSP 1608
Score = 99.4 bits (246), Expect = 1e-19
Identities = 55/83 (66%), Positives = 61/83 (73%), Gaps = 9/83 (10%)
Frame = -2
Query: 539 SPSSP-YSPTS-------PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTS P YSPTSPSYSPTSP YSP+SP+YSPSSP S SP YSP+S
Sbjct: 1656 SPTSPAYSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSPSYSPTS 1715
Query: 383 PQFSP-STGYSPSQPGYSPSSTS 318
P +SP S YSPS P YSP+S S
Sbjct: 1716 PAYSPTSPRYSPSSPSYSPTSPS 1738
Score = 98.6 bits (244), Expect = 2e-19
Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTS-------PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTS P+YSPTSP+YSPTSPSY+P+SP YSP+SP S SP YSP+S
Sbjct: 1635 SPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPTS 1694
Query: 383 PQFSPST-GYSPSQPGYSPSSTSQYTP 306
P +SPS+ YSP+ P YSP+S + Y+P
Sbjct: 1695 PSYSPSSPSYSPTSPSYSPTSPA-YSP 1720
Score = 89.0 bits (219), Expect = 2e-16
Identities = 46/65 (70%), Positives = 51/65 (78%), Gaps = 4/65 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFS 372
SP+SP YSPTSP YSPTSPSYSP+SPSYSP+SP+YSP+SP S SP YSPSSP S
Sbjct: 1677 SPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSPSYSPTSPAYSPTSPRYSPSSPSYSPTS 1736
Query: 371 PSTGY 357
PS Y
Sbjct: 1737 PSYRY 1741
Score = 70.1 bits (170), Expect = 1e-10
Identities = 44/82 (53%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SPS SP S P SPS SPSSP YSP SP S SP YSP+SP +SP
Sbjct: 1514 SPSLRASPLSDAQFSPYVGNMPFSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSP 1573
Query: 368 -STGYSPSQPGYSPSSTSQYTP 306
S GYSP+ PGYSP+S S Y+P
Sbjct: 1574 TSPGYSPTSPGYSPTSPS-YSP 1594
[76][TOP]
>UniRef100_C8Z6G2 Rpo21p n=1 Tax=Saccharomyces cerevisiae EC1118 RepID=C8Z6G2_YEAST
Length = 1733
Score = 114 bits (285), Expect = 4e-24
Identities = 55/85 (64%), Positives = 70/85 (82%), Gaps = 2/85 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1641 SPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1700
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDK 291
YSP+ PGYSP S + Y+P+ +++
Sbjct: 1701 PSYSPTSPGYSPGSPA-YSPKQDEQ 1724
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1550 SPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1609
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1610 PSYSPTSPSYSPTSPS-YSP 1628
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1571 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1630
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1631 PSYSPTSPSYSPTSPS-YSP 1649
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1592 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1651
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1652 PSYSPTSPAYSPTSPS-YSP 1670
Score = 112 bits (280), Expect = 2e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1613 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTS 1672
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1673 PSYSPTSPSYSPTSPS-YSP 1691
Score = 112 bits (279), Expect = 2e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1543 SPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1602
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1603 PSYSPTSPSYSPTSPS-YSP 1621
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1620 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTS 1679
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1680 PSYSPTSPSYSPTSPN-YSP 1698
Score = 107 bits (266), Expect = 7e-22
Identities = 53/78 (67%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = -2
Query: 533 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 360
SSP +SPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1538 SSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1597
Query: 359 YSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1598 YSPTSPSYSPTSPS-YSP 1614
Score = 99.8 bits (247), Expect = 1e-19
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP + +SP +SPTSP+YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1588
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1589 PSYSPTSPSYSPTSPS-YSP 1607
Score = 53.9 bits (128), Expect = 7e-06
Identities = 26/43 (60%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS 414
SP+SP YSPTSP+YSPTSP YSP SP+YSP + NS
Sbjct: 1690 SPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQKHNENENS 1732
[77][TOP]
>UniRef100_C7GKZ2 Rpo21p n=2 Tax=Saccharomyces cerevisiae RepID=C7GKZ2_YEAS2
Length = 1733
Score = 114 bits (285), Expect = 4e-24
Identities = 55/85 (64%), Positives = 70/85 (82%), Gaps = 2/85 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1641 SPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1700
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDK 291
YSP+ PGYSP S + Y+P+ +++
Sbjct: 1701 PSYSPTSPGYSPGSPA-YSPKQDEQ 1724
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1550 SPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1609
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1610 PSYSPTSPSYSPTSPS-YSP 1628
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1571 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1630
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1631 PSYSPTSPSYSPTSPS-YSP 1649
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1592 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1651
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1652 PSYSPTSPAYSPTSPS-YSP 1670
Score = 112 bits (280), Expect = 2e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1613 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTS 1672
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1673 PSYSPTSPSYSPTSPS-YSP 1691
Score = 112 bits (279), Expect = 2e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1543 SPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1602
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1603 PSYSPTSPSYSPTSPS-YSP 1621
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1620 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTS 1679
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1680 PSYSPTSPSYSPTSPN-YSP 1698
Score = 107 bits (266), Expect = 7e-22
Identities = 53/78 (67%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = -2
Query: 533 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 360
SSP +SPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1538 SSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1597
Query: 359 YSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1598 YSPTSPSYSPTSPS-YSP 1614
Score = 99.8 bits (247), Expect = 1e-19
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP + +SP +SPTSP+YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1588
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1589 PSYSPTSPSYSPTSPS-YSP 1607
Score = 53.9 bits (128), Expect = 7e-06
Identities = 26/43 (60%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS 414
SP+SP YSPTSP+YSPTSP YSP SP+YSP + NS
Sbjct: 1690 SPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQKHNENENS 1732
[78][TOP]
>UniRef100_C4R4Y0 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4R4Y0_PICPG
Length = 1743
Score = 114 bits (285), Expect = 4e-24
Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1589 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTS 1648
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1649 PQYSPTSPQYSPTS-PQYSP 1667
Score = 114 bits (284), Expect = 6e-24
Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1575 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTS 1634
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1635 PQYSPTSPQYSPTS-PQYSP 1653
Score = 113 bits (283), Expect = 8e-24
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1554 SPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1613
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1614 PSYSPTSPSYSPTS-PQYSP 1632
Score = 112 bits (281), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1561 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1620
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1621 PSYSPTSPQYSPTS-PQYSP 1639
Score = 112 bits (279), Expect = 2e-23
Identities = 56/91 (61%), Positives = 67/91 (73%), Gaps = 2/91 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1652 SPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS 1711
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDKDERGKD 273
YSP+ P YSP+S QY+P + + K+
Sbjct: 1712 PQYSPTSPQYSPAS-PQYSPSRHSPNGESKE 1741
Score = 111 bits (278), Expect = 3e-23
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1547 APTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1606
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1607 PSYSPTSPSYSPTSPS-YSP 1625
Score = 110 bits (275), Expect = 6e-23
Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1610 SPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS 1669
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1670 PQYSPTSPQYSPTS-PQYSP 1688
Score = 110 bits (274), Expect = 8e-23
Identities = 55/80 (68%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1631 SPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS 1690
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1691 PQYSPTSPQYSPTS-PQYSP 1709
Score = 107 bits (267), Expect = 5e-22
Identities = 52/80 (65%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP ++PTSP YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1540 APTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1599
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1600 PSYSPTSPSYSPTSPS-YSP 1618
Score = 100 bits (250), Expect = 5e-20
Identities = 49/80 (61%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
S +SP ++PTSP ++PTSP YSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1533 SATSPGFAPTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1592
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1593 PSYSPTSPSYSPTSPS-YSP 1611
Score = 100 bits (250), Expect = 5e-20
Identities = 56/87 (64%), Positives = 65/87 (74%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTS-------PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTS P+YSPTSPSYSPTSP YSP+SP YSP+SP S SP YSP+S
Sbjct: 1596 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS 1655
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
PQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1656 PQYSPTSPQYSPTSPQYSPTS-PQYSP 1681
Score = 95.5 bits (236), Expect = 2e-18
Identities = 45/76 (59%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYS 354
SPY PTSP S TSP ++PTSP ++P+SP YSP+SP S SP YSP+SP +SP S YS
Sbjct: 1523 SPYQPTSPGLSATSPGFAPTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYS 1582
Query: 353 PSQPGYSPSSTSQYTP 306
P+ P YSP+S S Y+P
Sbjct: 1583 PTSPSYSPTSPS-YSP 1597
[79][TOP]
>UniRef100_B6JYP8 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6JYP8_SCHJY
Length = 1748
Score = 114 bits (285), Expect = 4e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1556 SPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1615
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1616 PSYSPTSPSYSPTSPS-YSP 1634
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1577 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1636
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1637 PSYSPTSPSYSPTSPS-YSP 1655
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1598 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1657
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1658 PSYSPTSPSYSPTSPS-YSP 1676
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1619 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1678
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1679 PSYSPTSPSYSPTSPS-YSP 1697
Score = 111 bits (278), Expect = 3e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSP+SP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1549 SPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1608
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1609 PSYSPTSPSYSPTSPS-YSP 1627
Score = 107 bits (266), Expect = 7e-22
Identities = 56/93 (60%), Positives = 66/93 (70%), Gaps = 15/93 (16%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP
Sbjct: 1647 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPGH 1706
Query: 368 ------------STGYSPSQPGYSPSSTSQYTP 306
S YSP+ P YSP+S S Y+P
Sbjct: 1707 SAQNAQGRMSPRSPVYSPTSPSYSPTSPS-YSP 1738
Score = 104 bits (259), Expect = 5e-21
Identities = 51/78 (65%), Positives = 64/78 (82%), Gaps = 2/78 (2%)
Frame = -2
Query: 533 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 360
SSP +SP+SP+YSP+SP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1544 SSPGFSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1603
Query: 359 YSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1604 YSPTSPSYSPTSPS-YSP 1620
Score = 102 bits (255), Expect = 1e-20
Identities = 55/93 (59%), Positives = 69/93 (74%), Gaps = 5/93 (5%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1626 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1685
Query: 365 TGYSPSQP---GYSPSSTSQYTPQTNDKDERGK 276
YSP+ P SPS Y+P + ++ +G+
Sbjct: 1686 PSYSPTSPSYSPTSPS----YSPGHSAQNAQGR 1714
Score = 90.9 bits (224), Expect = 5e-17
Identities = 49/85 (57%), Positives = 56/85 (65%), Gaps = 14/85 (16%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS-------------SPYNSGVSP 402
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S SP
Sbjct: 1668 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPGHSAQNAQGRMSPRSPVYSPTSP 1727
Query: 401 DYSPSSPQFSPSTGYSPSQPGYSPS 327
YSP+SP YSP+ P YSP+
Sbjct: 1728 SYSPTSP------SYSPTSPRYSPN 1746
Score = 85.5 bits (210), Expect = 2e-15
Identities = 48/84 (57%), Positives = 58/84 (69%), Gaps = 8/84 (9%)
Frame = -2
Query: 533 SSPYSPT--SPNY-SP----TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 375
+SPY SP Y SP +SP +SP+SPSYSPSSP YSP+SP S SP YSP+SP +
Sbjct: 1524 ASPYGADARSPGYMSPFSGASSPGFSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSY 1583
Query: 374 SP-STGYSPSQPGYSPSSTSQYTP 306
SP S YSP+ P YSP+S S Y+P
Sbjct: 1584 SPTSPSYSPTSPSYSPTSPS-YSP 1606
[80][TOP]
>UniRef100_B3LH31 DNA-directed RNA polymerase n=1 Tax=Saccharomyces cerevisiae RM11-1a
RepID=B3LH31_YEAS1
Length = 1733
Score = 114 bits (285), Expect = 4e-24
Identities = 55/85 (64%), Positives = 70/85 (82%), Gaps = 2/85 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1641 SPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1700
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDK 291
YSP+ PGYSP S + Y+P+ +++
Sbjct: 1701 PSYSPTSPGYSPGSPA-YSPKQDEQ 1724
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1550 SPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1609
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1610 PSYSPTSPSYSPTSPS-YSP 1628
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1571 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1630
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1631 PSYSPTSPSYSPTSPS-YSP 1649
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1592 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1651
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1652 PSYSPTSPAYSPTSPS-YSP 1670
Score = 112 bits (280), Expect = 2e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1613 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTS 1672
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1673 PSYSPTSPSYSPTSPS-YSP 1691
Score = 112 bits (279), Expect = 2e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1543 SPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1602
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1603 PSYSPTSPSYSPTSPS-YSP 1621
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1620 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTS 1679
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1680 PSYSPTSPSYSPTSPN-YSP 1698
Score = 107 bits (266), Expect = 7e-22
Identities = 53/78 (67%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = -2
Query: 533 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 360
SSP +SPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1538 SSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1597
Query: 359 YSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1598 YSPTSPSYSPTSPS-YSP 1614
Score = 99.4 bits (246), Expect = 1e-19
Identities = 48/79 (60%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
P+SP + +SP +SPTSP+YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1530 PTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1589
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1590 SYSPTSPSYSPTSPS-YSP 1607
Score = 53.9 bits (128), Expect = 7e-06
Identities = 26/43 (60%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS 414
SP+SP YSPTSP+YSPTSP YSP SP+YSP + NS
Sbjct: 1690 SPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQKHNENENS 1732
[81][TOP]
>UniRef100_A5E6J4 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
RepID=A5E6J4_LODEL
Length = 1745
Score = 114 bits (285), Expect = 4e-24
Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1632 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTS 1691
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1692 PQYSPTSPSYSPTSPS-YSP 1710
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1555 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1614
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1615 PSYSPTSPSYSPTSPS-YSP 1633
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1576 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1635
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1636 PSYSPTSPSYSPTSPS-YSP 1654
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1597 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1656
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1657 PSYSPTSPSYSPTSPS-YSP 1675
Score = 112 bits (281), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1618 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1677
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1678 PSYSPTSPQYSPTS-PQYSP 1696
Score = 111 bits (278), Expect = 3e-23
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1535 SPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1594
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1595 SYSPTSPSYSPTSPS-YSP 1612
Score = 111 bits (278), Expect = 3e-23
Identities = 56/87 (64%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1660 SPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTS 1719
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDKDE 285
YSP P YSP S +Y P++ K +
Sbjct: 1720 PQYSPRSPNYSPKS-PEYKPKSPSKKD 1745
Score = 110 bits (275), Expect = 6e-23
Identities = 58/93 (62%), Positives = 67/93 (72%), Gaps = 4/93 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1653 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTS 1712
Query: 365 TGYSPSQPGYSPSST--SQYTPQTNDKDERGKD 273
YSP+ P YSP S S +P+ K KD
Sbjct: 1713 PQYSPTSPQYSPRSPNYSPKSPEYKPKSPSKKD 1745
Score = 102 bits (254), Expect = 2e-20
Identities = 56/87 (64%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP +YSP+SP S SP YSP+S
Sbjct: 1604 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1663
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P +SP S YSP+ P YSP+S QY+P
Sbjct: 1664 PSYSPTSPSYSPTSPSYSPTS-PQYSP 1689
Score = 76.3 bits (186), Expect = 1e-12
Identities = 44/87 (50%), Positives = 55/87 (63%), Gaps = 10/87 (11%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYSPTSP---------SYSPSSPTYSPSSPYNSGVSPDYSPSS 384
P+SP + TSP T+P Y TSP YSP+SP+YSP+SP S SP YSP+S
Sbjct: 1507 PTSPGN-TSPFSYGTTPGYGGTSPGYGGTSPGYGYSPTSPSYSPTSPSYSPTSPSYSPTS 1565
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P +SP S YSP+ P YSP+S S Y+P
Sbjct: 1566 PSYSPTSPSYSPTSPSYSPTSPS-YSP 1591
[82][TOP]
>UniRef100_A1YIA7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pichia kudriavzevii
RepID=A1YIA7_ISSOR
Length = 1647
Score = 114 bits (285), Expect = 4e-24
Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1527 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTS 1586
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1587 PQYSPTSPQYSPTS-PQYSP 1605
Score = 114 bits (284), Expect = 6e-24
Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1520 SPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTS 1579
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1580 PQYSPTSPQYSPTS-PQYSP 1598
Score = 112 bits (281), Expect = 1e-23
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1513 SPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTS 1572
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1573 PQYSPTSPQYSPTS-PQYSP 1591
Score = 110 bits (275), Expect = 6e-23
Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1548 SPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS 1607
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1608 PQYSPTSPQYSPTS-PQYSP 1626
Score = 109 bits (273), Expect = 1e-22
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1506 SPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1565
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1566 PQYSPTSPQYSPTS-PQYSP 1584
Score = 109 bits (273), Expect = 1e-22
Identities = 55/80 (68%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1569 SPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS 1628
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1629 PQYSPTSPQYSPTSPS-YSP 1647
Score = 109 bits (272), Expect = 1e-22
Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1485 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 1544
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1545 PSYSPTSPSYSPTSPS-YSP 1563
Score = 109 bits (272), Expect = 1e-22
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1499 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1558
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1559 PSYSPTSPQYSPTS-PQYSP 1577
Score = 108 bits (270), Expect = 2e-22
Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1478 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTS 1537
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1538 PSYSPTSPSYSPTSPS-YSP 1556
Score = 106 bits (265), Expect = 9e-22
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1472 PTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1531
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1532 SYSPTSPSYSPTSPS-YSP 1549
Score = 106 bits (264), Expect = 1e-21
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
P+SP Y PTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1465 PTSPSYGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1524
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1525 AYSPTSPSYSPTSPS-YSP 1542
Score = 103 bits (258), Expect = 6e-21
Identities = 50/77 (64%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S Y PTSP+Y PTSPSYSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1460 SPSYGPTSPSYGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1519
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 1520 SPTSPAYSPTSPS-YSP 1535
Score = 100 bits (250), Expect = 5e-20
Identities = 50/80 (62%), Positives = 60/80 (75%), Gaps = 3/80 (3%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
P+SP Y TSP+Y PTSPSY PTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1450 PTSPFGYGATSPSYGPTSPSYGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1509
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1510 PAYSPTSPAYSPTSPA-YSP 1528
Score = 100 bits (250), Expect = 5e-20
Identities = 56/87 (64%), Positives = 65/87 (74%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTS-------PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTS P+YSPTSPSYSPTSP YSP+SP YSP+SP S SP YSP+S
Sbjct: 1534 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS 1593
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
PQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1594 PQYSPTSPQYSPTSPQYSPTS-PQYSP 1619
[83][TOP]
>UniRef100_P04050 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Saccharomyces
cerevisiae RepID=RPB1_YEAST
Length = 1733
Score = 114 bits (285), Expect = 4e-24
Identities = 55/85 (64%), Positives = 70/85 (82%), Gaps = 2/85 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1641 SPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1700
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDK 291
YSP+ PGYSP S + Y+P+ +++
Sbjct: 1701 PSYSPTSPGYSPGSPA-YSPKQDEQ 1724
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1550 SPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1609
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1610 PSYSPTSPSYSPTSPS-YSP 1628
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1571 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1630
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1631 PSYSPTSPSYSPTSPS-YSP 1649
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1592 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1651
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1652 PSYSPTSPAYSPTSPS-YSP 1670
Score = 112 bits (280), Expect = 2e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1613 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTS 1672
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1673 PSYSPTSPSYSPTSPS-YSP 1691
Score = 112 bits (279), Expect = 2e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1543 SPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1602
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1603 PSYSPTSPSYSPTSPS-YSP 1621
Score = 112 bits (279), Expect = 2e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1620 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTS 1679
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1680 PSYSPTSPSYSPTSPN-YSP 1698
Score = 107 bits (266), Expect = 7e-22
Identities = 53/78 (67%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = -2
Query: 533 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 360
SSP +SPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1538 SSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1597
Query: 359 YSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1598 YSPTSPSYSPTSPS-YSP 1614
Score = 99.8 bits (247), Expect = 1e-19
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP + +SP +SPTSP+YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1588
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1589 PSYSPTSPSYSPTSPS-YSP 1607
Score = 53.9 bits (128), Expect = 7e-06
Identities = 26/43 (60%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS 414
SP+SP YSPTSP+YSPTSP YSP SP+YSP + NS
Sbjct: 1690 SPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQKHNENENS 1732
[84][TOP]
>UniRef100_Q99366 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99366_SOYBN
Length = 625
Score = 114 bits (284), Expect = 6e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 462 SPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS 521
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
GYSP+ P YSP+S S Y+P
Sbjct: 522 PGYSPTSPSYSPTSPS-YSP 540
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 455 SPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 514
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ PGYSP+S S Y+P
Sbjct: 515 PAYSPTSPGYSPTSPS-YSP 533
Score = 112 bits (281), Expect = 1e-23
Identities = 57/80 (71%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 406 SPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS 465
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 466 PAYSPTSPAYSPTSPS-YSP 484
Score = 112 bits (279), Expect = 2e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 413 SPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 472
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 473 PAYSPTSPSYSPTSPS-YSP 491
Score = 111 bits (278), Expect = 3e-23
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 434 SPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 493
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 494 PSYSPTSPSYSPTSPS-YSP 512
Score = 111 bits (277), Expect = 4e-23
Identities = 56/80 (70%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP YSPTSP YSPTSP+YSPSSP YSP+SP S SP YSP+SP +SP S
Sbjct: 378 SPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTS 437
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 438 PSYSPTSPSYSPTSPS-YSP 456
Score = 110 bits (276), Expect = 5e-23
Identities = 56/80 (70%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSP+SP YSPTSP YSPTSP YSP+SPTYSPSSP S SP YSP+SP +SP S
Sbjct: 371 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 430
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 431 PSYSPTSPSYSPTSPS-YSP 449
Score = 110 bits (276), Expect = 5e-23
Identities = 54/80 (67%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 476 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTS 535
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P S ++Y+P
Sbjct: 536 PSYSPTSPSYNPQS-AKYSP 554
Score = 108 bits (271), Expect = 2e-22
Identities = 53/80 (66%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 399 SPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 458
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 459 PAYSPTSPAYSPTSPA-YSP 477
Score = 107 bits (267), Expect = 5e-22
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSP+YSPTSP YSP+SP+YSP+SP S SP Y+P S ++SPS
Sbjct: 497 SPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSL 556
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSPS P SPS S Y+P
Sbjct: 557 AYSPSSPRLSPS--SPYSP 573
Score = 100 bits (250), Expect = 5e-20
Identities = 51/78 (65%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
Frame = -2
Query: 533 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 360
SSP YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 366 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 425
Query: 359 YSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 426 YSPTSPSYSPTSPS-YSP 442
Score = 99.0 bits (245), Expect = 2e-19
Identities = 57/93 (61%), Positives = 65/93 (69%), Gaps = 15/93 (16%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTY-------------SPSSPYNSGVSP 402
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+Y SPSSP S SP
Sbjct: 511 SPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSP 570
Query: 401 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
YSP+SP +SP S YSP+ P YSPSS + Y+P
Sbjct: 571 -YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSP 601
Score = 91.3 bits (225), Expect = 4e-17
Identities = 54/93 (58%), Positives = 58/93 (62%), Gaps = 20/93 (21%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSY-------------SPSSPTYSPSSPYN----- 417
SP+SP YSPTSP+YSPTSPSYSPTSPSY SPSSP SPSSPY+
Sbjct: 518 SPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPYSPTSPN 577
Query: 416 -SGVSPDYSPSSPQFSPSTGYSPSQPGYSPSST 321
S SP YSP+SP YSPS P YSPS T
Sbjct: 578 YSPTSPSYSPTSP------SYSPSSPTYSPSRT 604
Score = 86.7 bits (213), Expect = 1e-15
Identities = 44/68 (64%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Frame = -2
Query: 503 YSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPSQPGYSP 330
+SPTS P YSP+SP YSPSSP YSP+SP S SP YSP+SP +SPS+ GYSP+ P YSP
Sbjct: 362 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP 421
Query: 329 SSTSQYTP 306
+S S Y+P
Sbjct: 422 TSPS-YSP 428
Score = 57.8 bits (138), Expect = 5e-07
Identities = 42/85 (49%), Positives = 49/85 (57%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPT--SPSYSP-SSPTYSPSSPYNSGVSPD---YSPSSPQ 378
SPS SP T +SP ++SP SSP YSPSSP G SP YSP+SP
Sbjct: 334 SPSYLLSPNLRLSPTTDAQFSPYVGGMAFSPTSSPGYSPSSP---GYSPSSPGYSPTSPG 390
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTP 306
+SP S GYSP+ P YSPSS Y+P
Sbjct: 391 YSPTSPGYSPTSPTYSPSSPG-YSP 414
[85][TOP]
>UniRef100_A7NVN7 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7NVN7_VITVI
Length = 1010
Score = 114 bits (284), Expect = 6e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 893 SPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS 952
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
GYSP+ P YSP+S S Y+P
Sbjct: 953 PGYSPTSPSYSPTSPS-YSP 971
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 844 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTS 903
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 904 PAYSPTSPSYSPTSPS-YSP 922
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 886 SPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 945
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ PGYSP+S S Y+P
Sbjct: 946 PAYSPTSPGYSPTSPS-YSP 964
Score = 112 bits (280), Expect = 2e-23
Identities = 57/80 (71%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S SP YSP+SP +SP S
Sbjct: 788 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 847
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 848 PSYSPTSPSYSPTSPS-YSP 866
Score = 112 bits (280), Expect = 2e-23
Identities = 55/80 (68%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 907 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTS 966
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+PSS ++Y+P
Sbjct: 967 PSYSPTSPSYNPSS-AKYSP 985
Score = 111 bits (277), Expect = 4e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 830 SPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTS 889
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 890 PSYSPTSPAYSPTSPA-YSP 908
Score = 110 bits (276), Expect = 5e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 823 SPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 882
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 883 PVYSPTSPSYSPTSPA-YSP 901
Score = 110 bits (275), Expect = 6e-23
Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 865 SPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 924
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 925 PSYSPTSPSYSPTSPS-YSP 943
Score = 108 bits (271), Expect = 2e-22
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 816 SPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 875
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 876 PSYSPTSPVYSPTSPS-YSP 894
Score = 108 bits (271), Expect = 2e-22
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSP+YSPTSP YSP+SP+YSP+SP S SP Y+PSS ++SPS
Sbjct: 928 SPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSL 987
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSPS P SPS S Y+P
Sbjct: 988 AYSPSSPRLSPS--SPYSP 1004
Score = 106 bits (265), Expect = 9e-22
Identities = 54/80 (67%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSP+SP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 781 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 840
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 841 PSYSPTSPSYSPTSPS-YSP 859
Score = 106 bits (264), Expect = 1e-21
Identities = 50/74 (67%), Positives = 60/74 (81%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSP+SP YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 809 SPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 868
Query: 365 TGYSPSQPGYSPSS 324
YSP+ P YSP+S
Sbjct: 869 PSYSPTSPSYSPTS 882
Score = 102 bits (253), Expect = 2e-20
Identities = 52/78 (66%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
Frame = -2
Query: 533 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 360
SSP YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S SP YSPSSP +SP S
Sbjct: 776 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 835
Query: 359 YSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 836 YSPTSPSYSPTSPS-YSP 852
Score = 84.7 bits (208), Expect = 4e-15
Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
Frame = -2
Query: 503 YSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSP 330
+SPTS P YSP+SP YSPSSP YSP+SP S SP YSP+SP +SP S YSPS PGYSP
Sbjct: 772 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 831
Query: 329 SSTSQYTP 306
+S + Y+P
Sbjct: 832 TSPA-YSP 838
Score = 69.7 bits (169), Expect = 1e-10
Identities = 47/86 (54%), Positives = 55/86 (63%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSPYSP-TSPNYSPT--SPSYSPTS-PSYSPSSPTYSPSSPYNSG---VSPDYSPSSP 381
SP+ SP T +SP ++SPTS P YSPSSP YSPSSP G SP YSP+SP
Sbjct: 750 SPNLRLSPITDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSP---GYSPTSPGYSPTSP 806
Query: 380 QFSP-STGYSPSQPGYSPSSTSQYTP 306
+SP S GYSP+ P YSPSS Y+P
Sbjct: 807 GYSPTSPGYSPTSPTYSPSSPG-YSP 831
Score = 55.5 bits (132), Expect = 2e-06
Identities = 32/53 (60%), Positives = 36/53 (67%), Gaps = 14/53 (26%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSY-------------SPTSPSYSPSSPTYSPSSP 423
SP+SP YSPTSP+YSPTSPSY SP+SP SPSSP YSP+SP
Sbjct: 956 SPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSLAYSPSSPRLSPSSP-YSPTSP 1007
[86][TOP]
>UniRef100_Q5ACI7 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=Q5ACI7_CANAL
Length = 1728
Score = 114 bits (284), Expect = 6e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1607 SPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTS 1666
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1667 PSYSPTSPQYSPTSPS-YSP 1685
Score = 113 bits (282), Expect = 1e-23
Identities = 58/93 (62%), Positives = 69/93 (74%), Gaps = 8/93 (8%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1635 SPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTS 1694
Query: 365 TGYSPSQPGYSPSS------TSQYTPQTNDKDE 285
YSP+ P YSP+S + Y P+ KDE
Sbjct: 1695 PQYSPTSPQYSPTSPQYSPGSPGYEPEPPKKDE 1727
Score = 112 bits (280), Expect = 2e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1600 SPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTS 1659
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1660 PQYSPTSPSYSPTS-PQYSP 1678
Score = 110 bits (274), Expect = 8e-23
Identities = 53/80 (66%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSPTSP+Y+PTSP+YSPTSPSY+P+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1558 APTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTS 1617
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1618 PSYSPTSPSYSPTSPS-YSP 1636
Score = 110 bits (274), Expect = 8e-23
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1593 SPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTS 1652
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1653 PSYSPTSPQYSPTSPS-YSP 1671
Score = 110 bits (274), Expect = 8e-23
Identities = 56/80 (70%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1628 SPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTS 1687
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1688 PQYSPTSPQYSPTS-PQYSP 1706
Score = 109 bits (272), Expect = 1e-22
Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1586 APTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS 1645
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1646 PSYSPTSPSYSPTS-PQYSP 1664
Score = 108 bits (271), Expect = 2e-22
Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP Y+PTSP YSPTSP+YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1579 SPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTS 1638
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1639 PAYSPTSPSYSPTSPS-YSP 1657
Score = 107 bits (266), Expect = 7e-22
Identities = 50/79 (63%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
SP YSPTSP+YSPTSPSY+PTSP+YSP+SP+Y+P+SP S SP Y+P+SP +SP S
Sbjct: 1538 SPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSP 1597
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1598 AYSPTSPSYSPTS-PQYSP 1615
Score = 92.4 bits (228), Expect = 2e-17
Identities = 45/77 (58%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S Y+ YSPTSPSYSPTSPSY+P+SP YSP+SP + SP YSP+SP ++P S Y
Sbjct: 1533 SPGYTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAY 1592
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 1593 SPTSPAYSPTSPS-YSP 1608
Score = 83.6 bits (205), Expect = 8e-15
Identities = 40/73 (54%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = -2
Query: 521 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQ 345
S TSP Y+ YSPTSPSYSP+SP+Y+P+SP S SP Y+P+SP +SP S Y+P+
Sbjct: 1530 SITSPGYTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTS 1589
Query: 344 PGYSPSSTSQYTP 306
P YSP+S + Y+P
Sbjct: 1590 PAYSPTSPA-YSP 1601
[87][TOP]
>UniRef100_C4YN85 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=C4YN85_CANAL
Length = 1742
Score = 114 bits (284), Expect = 6e-24
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1621 SPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTS 1680
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1681 PSYSPTSPQYSPTSPS-YSP 1699
Score = 113 bits (282), Expect = 1e-23
Identities = 58/93 (62%), Positives = 69/93 (74%), Gaps = 8/93 (8%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1649 SPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTS 1708
Query: 365 TGYSPSQPGYSPSS------TSQYTPQTNDKDE 285
YSP+ P YSP+S + Y P+ KDE
Sbjct: 1709 PQYSPTSPQYSPTSPQYSPGSPGYEPEPPKKDE 1741
Score = 112 bits (280), Expect = 2e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1614 SPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTS 1673
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1674 PQYSPTSPSYSPTS-PQYSP 1692
Score = 110 bits (274), Expect = 8e-23
Identities = 53/80 (66%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSPTSP+Y+PTSP+YSPTSPSY+P+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1572 APTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTS 1631
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1632 PSYSPTSPSYSPTSPS-YSP 1650
Score = 110 bits (274), Expect = 8e-23
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1607 SPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTS 1666
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1667 PSYSPTSPQYSPTSPS-YSP 1685
Score = 110 bits (274), Expect = 8e-23
Identities = 56/80 (70%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1642 SPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTS 1701
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1702 PQYSPTSPQYSPTS-PQYSP 1720
Score = 109 bits (272), Expect = 1e-22
Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1600 APTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS 1659
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1660 PSYSPTSPSYSPTS-PQYSP 1678
Score = 108 bits (271), Expect = 2e-22
Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP Y+PTSP YSPTSP+YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1593 SPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTS 1652
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1653 PAYSPTSPSYSPTSPS-YSP 1671
Score = 105 bits (261), Expect = 3e-21
Identities = 51/80 (63%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSPTSP+Y+PTSP+YSPTSPSY+P+SP YSP+SP + SP YSP+SP +SP S
Sbjct: 1558 APTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTS 1617
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1618 PSYSPTSPQYSPTSPS-YSP 1636
Score = 104 bits (259), Expect = 5e-21
Identities = 48/79 (60%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
SP YSPTSP+YSPTSPSY+PTSP+YSP+SP+Y+P+SP S SP Y+P+SP +SP S
Sbjct: 1538 SPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSP 1597
Query: 362 GYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S + Y+P
Sbjct: 1598 SYAPTSPAYSPTSPA-YSP 1615
Score = 96.3 bits (238), Expect = 1e-18
Identities = 52/87 (59%), Positives = 65/87 (74%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTS-------PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTS P YSPTSPSY+PTSP+YSP+SP+Y+P+SP S SP Y+P+S
Sbjct: 1544 SPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTS 1603
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P +SP S YSP+ P YSP+S QY+P
Sbjct: 1604 PAYSPTSPAYSPTSPSYSPTS-PQYSP 1629
Score = 90.1 bits (222), Expect = 9e-17
Identities = 43/77 (55%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S Y+ YSPTSPSYSPTSPSY+P+SP YSP+SP + SP YSP+SP ++P S Y
Sbjct: 1533 SPGYTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAY 1592
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P Y+P+S + Y+P
Sbjct: 1593 SPTSPSYAPTSPA-YSP 1608
Score = 84.3 bits (207), Expect = 5e-15
Identities = 41/73 (56%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Frame = -2
Query: 521 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQ 345
S TSP Y+ YSPTSPSYSP+SP+Y+P+SP S SP Y+P+SP +SP S Y+P+
Sbjct: 1530 SITSPGYTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTS 1589
Query: 344 PGYSPSSTSQYTP 306
P YSP+S S Y P
Sbjct: 1590 PAYSPTSPS-YAP 1601
[88][TOP]
>UniRef100_Q75A34 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Eremothecium
gossypii RepID=RPB1_ASHGO
Length = 1745
Score = 114 bits (284), Expect = 6e-24
Identities = 60/111 (54%), Positives = 72/111 (64%), Gaps = 22/111 (19%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1630 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1689
Query: 365 TGYSPSQPGYSPSSTS--------------------QYTPQTNDKDERGKD 273
YSP+ P YSP+S S Y+P N+ D+ KD
Sbjct: 1690 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPRSPSYSPSFNNNDKEQKD 1740
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1546 SPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1605
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1606 PSYSPTSPSYSPTSPS-YSP 1624
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1567 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1626
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1627 PSYSPTSPSYSPTSPS-YSP 1645
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1588 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1647
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1648 PSYSPTSPSYSPTSPS-YSP 1666
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1669 PSYSPTSPSYSPTSPS-YSP 1687
Score = 107 bits (267), Expect = 5e-22
Identities = 54/78 (69%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = -2
Query: 533 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 360
SSP +SPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1541 SSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1600
Query: 359 YSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1601 YSPTSPSYSPTSPS-YSP 1617
Score = 105 bits (263), Expect = 2e-21
Identities = 56/88 (63%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ
Sbjct: 1665 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQ----- 1719
Query: 362 GYSPSQPGYSPSSTSQYTPQTNDKDERG 279
YSP P YSPS + Q KDE G
Sbjct: 1720 -YSPRSPSYSPSFNNNDKEQ---KDENG 1743
[89][TOP]
>UniRef100_UPI0000F24379 DNA-directed RNA polymerase II largest subunit (RNA polymerase II
subunit 1) (B220) n=1 Tax=Pichia stipitis CBS 6054
RepID=UPI0000F24379
Length = 1739
Score = 113 bits (283), Expect = 8e-24
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1614 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1673
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1674 PSYSPTSPSYSPTS-PQYSP 1692
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1572 SPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1631
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1632 PSYSPTSPSYSPTSPS-YSP 1650
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1593 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1652
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1653 PSYSPTSPSYSPTSPS-YSP 1671
Score = 113 bits (282), Expect = 1e-23
Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1635 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTS 1694
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1695 PQYSPTSPLYSPTS-PQYSP 1713
Score = 113 bits (282), Expect = 1e-23
Identities = 58/87 (66%), Positives = 68/87 (78%), Gaps = 4/87 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1649 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPLYSPTS 1708
Query: 365 TGYSPSQPGYSPSST--SQYTPQTNDK 291
YSP+ P YSP S S +P+T DK
Sbjct: 1709 PQYSPTSPQYSPGSPEYSPNSPKTEDK 1735
Score = 112 bits (279), Expect = 2e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1565 SPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1624
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1625 PSYSPTSPSYSPTSPS-YSP 1643
Score = 109 bits (272), Expect = 1e-22
Identities = 53/77 (68%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1547 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1606
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 1607 SPTSPSYSPTSPS-YSP 1622
Score = 105 bits (261), Expect = 3e-21
Identities = 52/79 (65%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
S S Y TSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1538 SVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSP 1597
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1598 SYSPTSPSYSPTSPS-YSP 1615
Score = 85.9 bits (211), Expect = 2e-15
Identities = 51/94 (54%), Positives = 61/94 (64%), Gaps = 17/94 (18%)
Frame = -2
Query: 536 PSSPYSPTSP-NYSP---------------TSPSYSPTSPSYSPSSPTYSPSSPYNSGVS 405
P+SP S TSP +Y TSPSYSPTSPSYSP+SP+YSP+SP S S
Sbjct: 1517 PTSP-SATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1575
Query: 404 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
P YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1576 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1608
Score = 85.5 bits (210), Expect = 2e-15
Identities = 46/82 (56%), Positives = 59/82 (71%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSPYS--PTSPNYSPT-SPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
S +SP+S TSP++ + SP Y TSPSYSP+SP+YSP+SP S SP YSP+SP +SP
Sbjct: 1521 SATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSP 1580
Query: 368 -STGYSPSQPGYSPSSTSQYTP 306
S YSP+ P YSP+S S Y+P
Sbjct: 1581 TSPSYSPTSPSYSPTSPS-YSP 1601
Score = 60.8 bits (146), Expect = 6e-08
Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Frame = -2
Query: 515 TSPNYSPTSPSYSPTSP-SYSPSSPTYSPS-SPYNSGVSPDYSPSSPQFSP-STGYSPSQ 345
TS PTSPS TSP SY +SP++ S SP G SP YSP+SP +SP S YSP+
Sbjct: 1511 TSYGGQPTSPS--ATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTS 1568
Query: 344 PGYSPSSTSQYTP 306
P YSP+S + Y+P
Sbjct: 1569 PSYSPTSPA-YSP 1580
[90][TOP]
>UniRef100_UPI000186D846 predicted protein n=1 Tax=Pediculus humanus corporis
RepID=UPI000186D846
Length = 1885
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1602 SPNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1661
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1662 PSYSPTSPSYSPTSPS-YSP 1680
Score = 112 bits (280), Expect = 2e-23
Identities = 53/79 (67%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1658 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSRTSPSYSPTSPSYSPSS 1717
Query: 362 -GYSPSQPGYSPSSTSQYT 309
Y+P+ P +SP+S S Y+
Sbjct: 1718 PNYTPASPSFSPTSPSLYS 1736
Score = 112 bits (279), Expect = 2e-23
Identities = 54/76 (71%), Positives = 63/76 (82%), Gaps = 2/76 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1623 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1682
Query: 365 TGYSPSQPGYSPSSTS 318
YSP+ P YSP+S S
Sbjct: 1683 PSYSPTSPSYSPTSPS 1698
Score = 111 bits (278), Expect = 3e-23
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SPNYSP SPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1588 SPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1647
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1648 PSYSPTSPSYSPTSPS-YSP 1666
Score = 111 bits (278), Expect = 3e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS-PS 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +S S
Sbjct: 1644 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSRTS 1703
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSPSS + YTP
Sbjct: 1704 PSYSPTSPSYSPSSPN-YTP 1722
Score = 106 bits (265), Expect = 9e-22
Identities = 51/77 (66%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
SS YSPTSP+YSP+SP+YSP SPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1584 SSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1643
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 1644 SPTSPSYSPTSPS-YSP 1659
Score = 104 bits (260), Expect = 3e-21
Identities = 54/86 (62%), Positives = 65/86 (75%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
SP+SP YSPTSP+YSPTSPSYSPTSPSYS +SP+YSP+SP S SP+Y+P+SP FSP
Sbjct: 1672 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSRTSPSYSPTSPSYSPSSPNYTPASPSFSPTS 1731
Query: 368 -----STGYSPSQPGYSPSSTSQYTP 306
S YSP+ P YSP S +Y+P
Sbjct: 1732 PSLYSSPRYSPASPSYSPGS-PKYSP 1756
Score = 103 bits (258), Expect = 6e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP ++PTSP+ +PTS +YSPTSPSYSPSSP YSP+SP S SP YSP+SP +SP S
Sbjct: 1567 SPSSPAFAPTSPSMTPTSSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPTS 1626
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1627 PSYSPTSPSYSPTSPS-YSP 1645
Score = 103 bits (258), Expect = 6e-21
Identities = 51/80 (63%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP +PTS NYSPTSPSYSP+SP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1574 APTSPSMTPTSSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1633
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1634 PSYSPTSPSYSPTSPS-YSP 1652
Score = 103 bits (256), Expect = 1e-20
Identities = 57/92 (61%), Positives = 65/92 (70%), Gaps = 14/92 (15%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPD------YSPSSP 381
SP+SP YSPTSP+YS TSPSYSPTSPSYSPSSP Y+P+SP S SP YSP+SP
Sbjct: 1686 SPTSPSYSPTSPSYSRTSPSYSPTSPSYSPSSPNYTPASPSFSPTSPSLYSSPRYSPASP 1745
Query: 380 QFSP-STGYSPSQPGYSPSSTS------QYTP 306
+SP S YSP+ P YSP+S S QYTP
Sbjct: 1746 SYSPGSPKYSPTSPSYSPTSPSYASVSPQYTP 1777
Score = 102 bits (255), Expect = 1e-20
Identities = 53/90 (58%), Positives = 64/90 (71%), Gaps = 9/90 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
SP SP YSPTSP+YSPTSPSY+ SP Y+P+SP YSP+SP S SP YSPSSP +P
Sbjct: 1748 SPGSPKYSPTSPSYSPTSPSYASVSPQYTPTSPQYSPTSPTYSPTSPSYSPSSPSHTPGA 1807
Query: 368 STGYSPSQPGYSPSSTS------QYTPQTN 297
ST YSP+ P YSP+S S QY+P ++
Sbjct: 1808 STRYSPTSPKYSPTSLSYSPASPQYSPSSS 1837
Score = 102 bits (253), Expect = 2e-20
Identities = 50/79 (63%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
SP+SP +SP YSP SPSYSP SP YSP+SP+YSP+SP + VSP Y+P+SPQ+SP S
Sbjct: 1728 SPTSPSLYSSPRYSPASPSYSPGSPKYSPTSPSYSPTSPSYASVSPQYTPTSPQYSPTSP 1787
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSPSS S +TP
Sbjct: 1788 TYSPTSPSYSPSSPS-HTP 1805
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/77 (61%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YSP+SP ++PTSPS +PTS +YSP+SP+YSPSSP S SP YSP+SP +SP S Y
Sbjct: 1563 SPSYSPSSPAFAPTSPSMTPTSSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSY 1622
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 1623 SPTSPSYSPTSPS-YSP 1638
Score = 95.1 bits (235), Expect = 3e-18
Identities = 50/83 (60%), Positives = 56/83 (67%), Gaps = 11/83 (13%)
Frame = -2
Query: 539 SPSSP---------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 387
SPSSP YSPTSP YSPTS SYSP SP YSPSS YSP+SP + SPDYS S
Sbjct: 1797 SPSSPSHTPGASTRYSPTSPKYSPTSLSYSPASPQYSPSSSKYSPTSPTYTPTSPDYSAS 1856
Query: 386 SPQFSPS--TGYSPSQPGYSPSS 324
SP +SP+ YSP+ P YSP+S
Sbjct: 1857 SPTYSPTGPPSYSPTSPTYSPTS 1879
Score = 92.4 bits (228), Expect = 2e-17
Identities = 50/84 (59%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP-SSPYNSGVSPDYSPSSPQFSP-S 366
S S Y+PTSP YSPTSP+YSPTSPSYSPSSP+++P +S S SP YSP+S +SP S
Sbjct: 1770 SVSPQYTPTSPQYSPTSPTYSPTSPSYSPSSPSHTPGASTRYSPTSPKYSPTSLSYSPAS 1829
Query: 365 TGYSPSQPGYSPSSTSQYTPQTND 294
YSPS YSP+S + YTP + D
Sbjct: 1830 PQYSPSSSKYSPTSPT-YTPTSPD 1852
Score = 82.8 bits (203), Expect = 1e-14
Identities = 52/104 (50%), Positives = 70/104 (67%), Gaps = 18/104 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPS--------YSPTSPSYSPSSPTYSPSSPY----N---SGV 408
SP+SP YSPTSP+YSP+SPS YSPTSP YSP+S +YSP+SP + S
Sbjct: 1783 SPTSPTYSPTSPSYSPSSPSHTPGASTRYSPTSPKYSPTSLSYSPASPQYSPSSSKYSPT 1842
Query: 407 SPDYSPSSPQFSPST-GYSPS-QPGYSPSSTSQYTPQTNDKDER 282
SP Y+P+SP +S S+ YSP+ P YSP+S + Y+P + + D+R
Sbjct: 1843 SPTYTPTSPDYSASSPTYSPTGPPSYSPTSPT-YSPTSPEYDDR 1885
Score = 75.1 bits (183), Expect = 3e-12
Identities = 42/79 (53%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYSP-TSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
P SP SP P+ SP PS SPSYSPSSP ++P+SP + S +YSP+SP +SPS+
Sbjct: 1541 PGSPSSP-GPSNSPYVPSPGGGMSPSYSPSSPAFAPTSPSMTPTSSNYSPTSPSYSPSSP 1599
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1600 NYSPNSPSYSPTSPS-YSP 1617
Score = 65.9 bits (159), Expect = 2e-09
Identities = 43/89 (48%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSY-SPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
S SS S SP YSP SP SP+SP PS+ Y PS G+SP YSPSSP F+P
Sbjct: 1522 SGSSDASGLSPGYSPWSPQPGSPSSPG--PSNSPYVPSP--GGGMSPSYSPSSPAFAPTS 1577
Query: 368 ------STGYSPSQPGYSPSSTSQYTPQT 300
S+ YSP+ P YSPSS + Y+P +
Sbjct: 1578 PSMTPTSSNYSPTSPSYSPSSPN-YSPNS 1605
[91][TOP]
>UniRef100_UPI000186501C hypothetical protein BRAFLDRAFT_115025 n=1 Tax=Branchiostoma floridae
RepID=UPI000186501C
Length = 1956
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP SPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1623 SPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1682
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1683 PSYSPTSPSYSPTSPS-YSP 1701
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1644 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1703
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1704 PSYSPTSPSYSPTSPS-YSP 1722
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1665 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1724
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1725 PSYSPTSPSYSPTSPS-YSP 1743
Score = 112 bits (279), Expect = 2e-23
Identities = 55/82 (67%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP + SP YSP+SP +SP S
Sbjct: 1707 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTS 1766
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSP+S S Y+P +
Sbjct: 1767 PSYSPASPSYSPTSPS-YSPSS 1787
Score = 111 bits (277), Expect = 4e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1686 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1745
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1746 PNYTPTSPKYSPTSPS-YSP 1764
Score = 111 bits (277), Expect = 4e-23
Identities = 54/82 (65%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSP+Y+PTSP YSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1728 SPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTSPSYSPSS 1787
Query: 362 -GYSPSQPGYSPSSTSQYTPQT 300
YSP P YSPSS S Y+P +
Sbjct: 1788 PNYSPQSPSYSPSSPS-YSPSS 1808
Score = 110 bits (274), Expect = 8e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSP SP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1616 SPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1675
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1676 PSYSPTSPSYSPTSPS-YSP 1694
Score = 108 bits (270), Expect = 2e-22
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSP SP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 TPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1669 PSYSPTSPSYSPTSPS-YSP 1687
Score = 108 bits (269), Expect = 3e-22
Identities = 55/87 (63%), Positives = 67/87 (77%), Gaps = 7/87 (8%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
+P+SP YSPTSP+YSPTSPSYSP SPSYSP+SP+YSPSSP S SP YSPSSP +SPS+
Sbjct: 1749 TPTSPKYSPTSPSYSPTSPSYSPASPSYSPTSPSYSPSSPNYSPQSPSYSPSSPSYSPSS 1808
Query: 362 ------GYSPSQPGYSPSSTSQYTPQT 300
Y+P+ P YSPSS +Y+P +
Sbjct: 1809 PNPSSPKYTPTSPKYSPSS-PKYSPSS 1834
Score = 106 bits (265), Expect = 9e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNY+PTSP YSPTSPSYSP+SP+YSP+SP S SP YSPSSP +SP S
Sbjct: 1735 SPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTSPSYSPSSPNYSPQS 1794
Query: 365 TGYSPSQPG---YSPS-STSQYTP 306
YSPS P SP+ S+ +YTP
Sbjct: 1795 PSYSPSSPSYSPSSPNPSSPKYTP 1818
Score = 103 bits (258), Expect = 6e-21
Identities = 57/92 (61%), Positives = 65/92 (70%), Gaps = 14/92 (15%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT------------YSPSSPYNSGVSPD 399
SP+SP YSP+SPNYSP SPSYSP+SPSYSPSSP YSPSSP S SP
Sbjct: 1777 SPTSPSYSPSSPNYSPQSPSYSPSSPSYSPSSPNPSSPKYTPTSPKYSPSSPKYSPSSPK 1836
Query: 398 YSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 306
YSP+SP +SPS+ YSP+ P YSP ST +YTP
Sbjct: 1837 YSPTSPTYSPSSAKYSPASPSYSP-STPKYTP 1867
Score = 103 bits (257), Expect = 8e-21
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 5/90 (5%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ---FS 372
+P+SP YSP SP Y+PTSP YSPTSPSY+P +P YSP+SP S SP YSP+SP+ +S
Sbjct: 1866 TPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPTSPTYSPTSPKGSTYS 1925
Query: 371 PST-GYSPSQPGYSPSSTSQYTPQTNDKDE 285
P+T GYSP+ P YSP S Q ++DE
Sbjct: 1926 PTTPGYSPASPTYSPESPESRATQEEEEDE 1955
Score = 102 bits (254), Expect = 2e-20
Identities = 52/89 (58%), Positives = 64/89 (71%), Gaps = 9/89 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
+PSSP Y+PTSP YSP+SP YSP+SP YSP+SPTYSPSS S SP YSPS+P+++P
Sbjct: 1810 NPSSPKYTPTSPKYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTS 1869
Query: 368 ------STGYSPSQPGYSPSSTSQYTPQT 300
S Y+P+ P YSP+S S YTP T
Sbjct: 1870 PKYSPASPTYTPTSPKYSPTSPS-YTPDT 1897
Score = 99.8 bits (247), Expect = 1e-19
Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 4/84 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSS YSP SP+YSP++P Y+PTSP YSP+SPTY+P+SP S SP Y+P +P++SP S
Sbjct: 1845 SPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTS 1904
Query: 365 TGYSPSQPGYSPSST--SQYTPQT 300
YSP+ P YSP+S S Y+P T
Sbjct: 1905 PKYSPTSPTYSPTSPKGSTYSPTT 1928
Score = 93.2 bits (230), Expect = 1e-17
Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPTSPS---------------YSPTSPSYSPSSPTYSPSSPYN 417
P+SPY P+ SP+YSP SP+ YSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PASPYIPSPGGPMSPSYSPASPAYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNY 1636
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 93.2 bits (230), Expect = 1e-17
Identities = 51/85 (60%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPY---S---PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SPSSP S P+SP Y+PTSP YSP+SP YSPSSP YSP+SP S S YSP+SP
Sbjct: 1798 SPSSPSYSPSSPNPSSPKYTPTSPKYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPS 1857
Query: 377 FSPST-GYSPSQPGYSPSSTSQYTP 306
+SPST Y+P+ P YSP+S + YTP
Sbjct: 1858 YSPSTPKYTPTSPKYSPASPT-YTP 1881
Score = 91.3 bits (225), Expect = 4e-17
Identities = 50/87 (57%), Positives = 63/87 (72%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYS-------PTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SPSSP YSP+SP YSPTSP+YS P SPSYSPS+P Y+P+SP S SP Y+P+S
Sbjct: 1824 SPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTS 1883
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P++SP S Y+P P YSP+S +Y+P
Sbjct: 1884 PKYSPTSPSYTPDTPKYSPTS-PKYSP 1909
Score = 55.5 bits (132), Expect = 2e-06
Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
SPS+ + + + SP++SPT S P SP P+SPY +SP YSP+SP +
Sbjct: 1546 SPSAASDASGMSPAGYSPAWSPTPGS--PGSP--GPASPYIPSPGGPMSPSYSPASPAYM 1601
Query: 371 P---------STGYSPSQPGYSPSSTSQYTP 306
P S GYSP+ P YSP+S S Y+P
Sbjct: 1602 PRSPGGMTPQSPGYSPTSPSYSPTSPS-YSP 1631
[92][TOP]
>UniRef100_UPI000179348F PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179348F
Length = 1862
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1650 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1709
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1710 PSYSPTSPSYSPTSPS-YSP 1728
Score = 112 bits (279), Expect = 2e-23
Identities = 57/80 (71%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1671 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1730
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS P Y+ SS S YTP
Sbjct: 1731 PSYSPSSPQYAASSPS-YTP 1749
Score = 111 bits (277), Expect = 4e-23
Identities = 56/85 (65%), Positives = 66/85 (77%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSP------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP
Sbjct: 1638 SPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1697
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTP 306
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPS-YSP 1721
Score = 100 bits (248), Expect = 9e-20
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 21/101 (20%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y+ SSP ++PS
Sbjct: 1692 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYAASSPSYTPSA 1751
Query: 362 --------------------GYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSPS+ S Y+P +
Sbjct: 1752 TSGTSNYKYSPTSPSLAVSPTYSPTSPMYSPSNAS-YSPSS 1791
Score = 99.4 bits (246), Expect = 1e-19
Identities = 51/79 (64%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
SP+ YSPTSP+YSPTSPSYS TS YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1625 SPNYNYSPTSPSYSPTSPSYSHTS--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1682
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1683 SYSPTSPSYSPTSPS-YSP 1700
Score = 94.7 bits (234), Expect = 4e-18
Identities = 54/88 (61%), Positives = 64/88 (72%), Gaps = 10/88 (11%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYS-----PTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SP+SP YSPTSP+YS PTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP
Sbjct: 1631 SPTSPSYSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1690
Query: 377 FSPSTGYSPSQP----GYSPSSTSQYTP 306
+SP+ SPS YSP+S S Y+P
Sbjct: 1691 YSPT---SPSYSPTSPSYSPTSPS-YSP 1714
Score = 89.4 bits (220), Expect = 2e-16
Identities = 53/92 (57%), Positives = 61/92 (66%), Gaps = 14/92 (15%)
Frame = -2
Query: 539 SPSSP-----------YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPD 399
SP+SP YS SPNY SPTSPSYSPTSPSYS +S YSP+SP S SP
Sbjct: 1605 SPTSPQYSATQQNTPKYSSMSPNYNYSPTSPSYSPTSPSYSHTS--YSPTSPSYSPTSPS 1662
Query: 398 YSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1693
Score = 82.0 bits (201), Expect = 2e-14
Identities = 48/99 (48%), Positives = 56/99 (56%), Gaps = 21/99 (21%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSS-------------PTYSPSSPYNSG---- 411
SP+SP SP YSPTSP YSP++ SYSPSS +YSPSSP S
Sbjct: 1761 SPTSPSLAVSPTYSPTSPMYSPSNASYSPSSLQHTPNAGGTQYNQSYSPSSPVYSPTNFS 1820
Query: 410 -VSPDYSPSSPQFSPSTG---YSPSQPGYSPSSTSQYTP 306
SP YSP+SP +SP G YSPS P YSP+S + P
Sbjct: 1821 MASPRYSPTSPTYSPGVGSPHYSPSSPSYSPTSPNYSGP 1859
Score = 76.3 bits (186), Expect = 1e-12
Identities = 52/127 (40%), Positives = 61/127 (48%), Gaps = 48/127 (37%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP--------------------------- 444
SP+SP YSPTSP+YSPTSPSYSPTSPSYSPSSP
Sbjct: 1706 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYAASSPSYTPSATSGTSNYKYSPTSP 1765
Query: 443 -------------TYSPSSPYNSGVSPDYSPSSPQFSPSTG-------YSPSQPGYSPSS 324
YSPS + YSPSS Q +P+ G YSPS P YSP++
Sbjct: 1766 SLAVSPTYSPTSPMYSPS-------NASYSPSSLQHTPNAGGTQYNQSYSPSSPVYSPTN 1818
Query: 323 TSQYTPQ 303
S +P+
Sbjct: 1819 FSMASPR 1825
Score = 63.2 bits (152), Expect = 1e-08
Identities = 38/57 (66%), Positives = 41/57 (71%), Gaps = 8/57 (14%)
Frame = -2
Query: 539 SPSSP-YSPT-----SPNYSPTSPSYSP--TSPSYSPSSPTYSPSSPYNSGVSPDYS 393
SPSSP YSPT SP YSPTSP+YSP SP YSPSSP+YSP+SP SG PD S
Sbjct: 1808 SPSSPVYSPTNFSMASPRYSPTSPTYSPGVGSPHYSPSSPSYSPTSPNYSG--PDES 1862
Score = 58.5 bits (140), Expect = 3e-07
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Frame = -2
Query: 533 SSPYSPT----SPNYS-PTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
+SPY P+ SPNY+ P+SP + SPS +P++ YSP+SP S + +P SP
Sbjct: 1570 TSPYVPSPSSMSPNYNYPSSPQFGSLSPSMTPTN--YSPTSPQYSATQQN-TPKYSSMSP 1626
Query: 368 STGYSPSQPGYSPSSTS 318
+ YSP+ P YSP+S S
Sbjct: 1627 NYNYSPTSPSYSPTSPS 1643
[93][TOP]
>UniRef100_UPI000179338A PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179338A
Length = 1862
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1650 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1709
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1710 PSYSPTSPSYSPTSPS-YSP 1728
Score = 112 bits (279), Expect = 2e-23
Identities = 57/80 (71%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1671 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1730
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS P Y+ SS S YTP
Sbjct: 1731 PSYSPSSPQYTASSPS-YTP 1749
Score = 111 bits (277), Expect = 4e-23
Identities = 56/85 (65%), Positives = 66/85 (77%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSP------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP
Sbjct: 1638 SPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1697
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTP 306
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPS-YSP 1721
Score = 102 bits (254), Expect = 2e-20
Identities = 57/86 (66%), Positives = 65/86 (75%), Gaps = 9/86 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP +YSP+SP S SP YSP+S
Sbjct: 1657 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1716
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYT 309
P +SP S YSP+ P YSPSS QYT
Sbjct: 1717 PSYSPTSPSYSPTSPSYSPSS-PQYT 1741
Score = 100 bits (248), Expect = 9e-20
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 21/101 (20%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y+ SSP ++PS
Sbjct: 1692 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYTASSPSYTPSA 1751
Query: 362 --------------------GYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSPS+ S Y+P +
Sbjct: 1752 TSGASNYKYSPTSPSLAVSPTYSPTSPMYSPSNAS-YSPSS 1791
Score = 99.4 bits (246), Expect = 1e-19
Identities = 51/79 (64%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
SP+ YSPTSP+YSPTSPSYS TS YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1625 SPNYNYSPTSPSYSPTSPSYSHTS--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1682
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1683 SYSPTSPSYSPTSPS-YSP 1700
Score = 94.7 bits (234), Expect = 4e-18
Identities = 54/88 (61%), Positives = 64/88 (72%), Gaps = 10/88 (11%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYS-----PTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SP+SP YSPTSP+YS PTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP
Sbjct: 1631 SPTSPSYSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1690
Query: 377 FSPSTGYSPSQP----GYSPSSTSQYTP 306
+SP+ SPS YSP+S S Y+P
Sbjct: 1691 YSPT---SPSYSPTSPSYSPTSPS-YSP 1714
Score = 89.4 bits (220), Expect = 2e-16
Identities = 53/92 (57%), Positives = 61/92 (66%), Gaps = 14/92 (15%)
Frame = -2
Query: 539 SPSSP-----------YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPD 399
SP+SP YS SPNY SPTSPSYSPTSPSYS +S YSP+SP S SP
Sbjct: 1605 SPTSPQYSATQQNTPKYSSMSPNYNYSPTSPSYSPTSPSYSHTS--YSPTSPSYSPTSPS 1662
Query: 398 YSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1693
Score = 82.8 bits (203), Expect = 1e-14
Identities = 48/100 (48%), Positives = 57/100 (57%), Gaps = 21/100 (21%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSS-------------PTYSPSSPYNSG---- 411
SP+SP SP YSPTSP YSP++ SYSPSS +YSPSSP S
Sbjct: 1761 SPTSPSLAVSPTYSPTSPMYSPSNASYSPSSVQHTPNAGVTQYNQSYSPSSPVYSPTNFS 1820
Query: 410 -VSPDYSPSSPQFSPSTG---YSPSQPGYSPSSTSQYTPQ 303
SP YSP+SP +SP G YSPS P YSP+S + P+
Sbjct: 1821 LASPRYSPTSPTYSPGVGSPNYSPSSPSYSPTSPNYSGPE 1860
Score = 80.1 bits (196), Expect = 9e-14
Identities = 55/124 (44%), Positives = 64/124 (51%), Gaps = 45/124 (36%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP--------------------------- 444
SP+SP YSPTSP+YSPTSPSYSPTSPSYSPSSP
Sbjct: 1706 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYTASSPSYTPSATSGASNYKYSPTSP 1765
Query: 443 ------TYSP----SSPYNSGVSPDYSPSSPQFSPSTG-------YSPSQPGYSPSSTSQ 315
TYSP SP N+ YSPSS Q +P+ G YSPS P YSP++ S
Sbjct: 1766 SLAVSPTYSPTSPMYSPSNA----SYSPSSVQHTPNAGVTQYNQSYSPSSPVYSPTNFSL 1821
Query: 314 YTPQ 303
+P+
Sbjct: 1822 ASPR 1825
Score = 62.4 bits (150), Expect = 2e-08
Identities = 34/56 (60%), Positives = 37/56 (66%), Gaps = 7/56 (12%)
Frame = -2
Query: 524 YSPTSPNYSPT-----SPSYSPTSPSYSPS--SPTYSPSSPYNSGVSPDYSPSSPQ 378
YSP+SP YSPT SP YSPTSP+YSP SP YSPSSP S SP+YS Q
Sbjct: 1807 YSPSSPVYSPTNFSLASPRYSPTSPTYSPGVGSPNYSPSSPSYSPTSPNYSGPEEQ 1862
Score = 58.5 bits (140), Expect = 3e-07
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Frame = -2
Query: 533 SSPYSPT----SPNYS-PTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
+SPY P+ SPNY+ P+SP + SPS +P++ YSP+SP S + +P SP
Sbjct: 1570 TSPYVPSPNSMSPNYNYPSSPQFGSMSPSMTPTN--YSPTSPQYSATQQN-TPKYSSMSP 1626
Query: 368 STGYSPSQPGYSPSSTS 318
+ YSP+ P YSP+S S
Sbjct: 1627 NYNYSPTSPSYSPTSPS 1643
[94][TOP]
>UniRef100_UPI000151A8B3 hypothetical protein PGUG_01105 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151A8B3
Length = 1018
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 834 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 893
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 894 PSYSPTSPSYSPTSPS-YSP 912
Score = 109 bits (273), Expect = 1e-22
Identities = 53/77 (68%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 816 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 875
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 876 SPTSPSYSPTSPS-YSP 891
Score = 109 bits (272), Expect = 1e-22
Identities = 52/73 (71%), Positives = 61/73 (83%), Gaps = 2/73 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 841 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 900
Query: 365 TGYSPSQPGYSPS 327
YSP+ P YSP+
Sbjct: 901 PSYSPTSPSYSPT 913
Score = 103 bits (258), Expect = 6e-21
Identities = 51/77 (66%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S Y TSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 809 SPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 868
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 869 SPTSPSYSPTSPS-YSP 884
Score = 98.6 bits (244), Expect = 2e-19
Identities = 47/70 (67%), Positives = 58/70 (82%), Gaps = 1/70 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP+
Sbjct: 855 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT- 913
Query: 362 GYSPSQPGYS 333
++ QP +S
Sbjct: 914 -FAKLQPNFS 922
Score = 96.7 bits (239), Expect = 9e-19
Identities = 50/88 (56%), Positives = 60/88 (68%), Gaps = 10/88 (11%)
Frame = -2
Query: 539 SPSSP---------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 387
SP+SP Y SP Y TSP+YSPTSPSYSP+SP+YSP+SP S SP YSP+
Sbjct: 791 SPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 850
Query: 386 SPQFSP-STGYSPSQPGYSPSSTSQYTP 306
SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 851 SPSYSPTSPSYSPTSPSYSPTSPS-YSP 877
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/79 (58%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Frame = -2
Query: 536 PSSPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
P SP SPTSP Y TSP+Y SP Y +SPTYSP+SP S SP YSP+SP +SP S
Sbjct: 787 PGSP-SPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSP 845
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 846 SYSPTSPSYSPTSPS-YSP 863
[95][TOP]
>UniRef100_C3ZES3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
RepID=C3ZES3_BRAFL
Length = 1934
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP SPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1623 SPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1682
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1683 PSYSPTSPSYSPTSPS-YSP 1701
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1644 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1703
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1704 PSYSPTSPSYSPTSPS-YSP 1722
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1665 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1724
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1725 PSYSPTSPSYSPTSPS-YSP 1743
Score = 111 bits (277), Expect = 4e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1686 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1745
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1746 PNYTPTSPKYSPTSPS-YSP 1764
Score = 110 bits (274), Expect = 8e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSP SP+YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1616 SPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1675
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1676 PSYSPTSPSYSPTSPS-YSP 1694
Score = 109 bits (273), Expect = 1e-22
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP + SP YSP+SP +SP S
Sbjct: 1707 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTS 1766
Query: 365 TGYSPSQPGYSPSSTSQYT 309
YSP+ P YSP+ S T
Sbjct: 1767 PSYSPASPSYSPTILSNLT 1785
Score = 108 bits (270), Expect = 2e-22
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP YSPTSP+YSPTSPSYSP SP+YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1609 TPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1669 PSYSPTSPSYSPTSPS-YSP 1687
Score = 103 bits (258), Expect = 6e-21
Identities = 55/98 (56%), Positives = 66/98 (67%), Gaps = 20/98 (20%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP+YSPTSPSYSPTSP+Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1721 SPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTI 1780
Query: 365 ------------------TGYSPSQPGYSPSSTSQYTP 306
T YSPS P YSPSS +Y+P
Sbjct: 1781 LSNLTQLQPHLTPVHSHVTQYSPSSPKYSPSS-PKYSP 1817
Score = 103 bits (257), Expect = 8e-21
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 5/90 (5%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ---FS 372
+P+SP YSP SP Y+PTSP YSPTSPSY+P +P YSP+SP S SP YSP+SP+ +S
Sbjct: 1844 TPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPTSPTYSPTSPKGSTYS 1903
Query: 371 PST-GYSPSQPGYSPSSTSQYTPQTNDKDE 285
P+T GYSP+ P YSP S Q ++DE
Sbjct: 1904 PTTPGYSPASPTYSPESPESRATQEEEEDE 1933
Score = 99.8 bits (247), Expect = 1e-19
Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 4/84 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSS YSP SP+YSP++P Y+PTSP YSP+SPTY+P+SP S SP Y+P +P++SP S
Sbjct: 1823 SPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTS 1882
Query: 365 TGYSPSQPGYSPSST--SQYTPQT 300
YSP+ P YSP+S S Y+P T
Sbjct: 1883 PKYSPTSPTYSPTSPKGSTYSPTT 1906
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSP+SP YSPTSP+YSP+S YSP+SP+YSPS+P + SP YSP+SP ++P S
Sbjct: 1802 SPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTS 1861
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P T +Y+P
Sbjct: 1862 PKYSPTSPSYTP-DTPKYSP 1880
Score = 99.0 bits (245), Expect = 2e-19
Identities = 49/80 (61%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP YSP+S YSP SPSYSPS+P Y+P+SP S SP Y+P+SP++SP S
Sbjct: 1809 SPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTS 1868
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P P YSP+S +Y+P
Sbjct: 1869 PSYTPDTPKYSPTS-PKYSP 1887
Score = 97.8 bits (242), Expect = 4e-19
Identities = 54/92 (58%), Positives = 69/92 (75%), Gaps = 14/92 (15%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS------------SPYNSGVSPD 399
SP+SP Y+PTSP YSPTSPSYSPTSPSYSP+SP+YSP+ +P +S V+
Sbjct: 1742 SPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTILSNLTQLQPHLTPVHSHVT-Q 1800
Query: 398 YSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 306
YSPSSP++SPS+ YSP+ P YSPSS ++Y+P
Sbjct: 1801 YSPSSPKYSPSSPKYSPTSPTYSPSS-AKYSP 1831
Score = 97.8 bits (242), Expect = 4e-19
Identities = 47/76 (61%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 348
YSP+SP YSP+SP YSPTSP+YSPSS YSP+SP S +P Y+P+SP++SP S Y+P+
Sbjct: 1801 YSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPT 1860
Query: 347 QPGYSPSSTSQYTPQT 300
P YSP+S S YTP T
Sbjct: 1861 SPKYSPTSPS-YTPDT 1875
Score = 93.2 bits (230), Expect = 1e-17
Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPTSPS---------------YSPTSPSYSPSSPTYSPSSPYN 417
P+SPY P+ SP+YSP SP+ YSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PASPYIPSPGGPMSPSYSPASPAYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNY 1636
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 85.9 bits (211), Expect = 2e-15
Identities = 51/98 (52%), Positives = 61/98 (62%), Gaps = 20/98 (20%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPT--------SP----------SYSPTSPSYSPSSPTYSPSSPYN 417
SP+SP YSP SP+YSPT P YSP+SP YSPSSP YSP+SP
Sbjct: 1763 SPTSPSYSPASPSYSPTILSNLTQLQPHLTPVHSHVTQYSPSSPKYSPSSPKYSPTSPTY 1822
Query: 416 SGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 306
S S YSP+SP +SPST Y+P+ P YSP+S + YTP
Sbjct: 1823 SPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPT-YTP 1859
Score = 55.5 bits (132), Expect = 2e-06
Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
SPS+ + + + SP++SPT S P SP P+SPY +SP YSP+SP +
Sbjct: 1546 SPSAASDASGMSPAGYSPAWSPTPGS--PGSP--GPASPYIPSPGGPMSPSYSPASPAYM 1601
Query: 371 P---------STGYSPSQPGYSPSSTSQYTP 306
P S GYSP+ P YSP+S S Y+P
Sbjct: 1602 PRSPGGMTPQSPGYSPTSPSYSPTSPS-YSP 1631
[96][TOP]
>UniRef100_Q6CL79 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
RepID=Q6CL79_KLULA
Length = 1720
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1544 SPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1603
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1604 PSYSPTSPSYSPTSPS-YSP 1622
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1551 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1610
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1611 PSYSPTSPSYSPTSPS-YSP 1629
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1572 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1631
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1632 PSYSPTSPSYSPTSPS-YSP 1650
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1593 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1652
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1653 PSYSPTSPSYSPTSPS-YSP 1671
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1614 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1673
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1674 PSYSPTSPSYSPTSPS-YSP 1692
Score = 110 bits (274), Expect = 8e-23
Identities = 55/90 (61%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP
Sbjct: 1635 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP------ 1688
Query: 362 GYSPSQPGYSPSSTSQYTPQTNDKDERGKD 273
YSP+ P YSP S S P+ + DE K+
Sbjct: 1689 SYSPTSPQYSPGSYSPAEPKQQESDEEKKE 1718
Score = 108 bits (269), Expect = 3e-22
Identities = 54/78 (69%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = -2
Query: 533 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 360
SSP +SPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1539 SSPGFSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1598
Query: 359 YSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1599 YSPTSPSYSPTSPS-YSP 1615
[97][TOP]
>UniRef100_O94231 RNA polymerase II largest subunit (Fragment) n=1 Tax=Kluyveromyces
lactis RepID=O94231_KLULA
Length = 414
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 238 SPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 297
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 298 PSYSPTSPSYSPTSPS-YSP 316
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 245 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 304
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 305 PSYSPTSPSYSPTSPS-YSP 323
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 266 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 325
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 326 PSYSPTSPSYSPTSPS-YSP 344
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 287 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 346
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 347 PSYSPTSPSYSPTSPS-YSP 365
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 308 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 367
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 368 PSYSPTSPSYSPTSPS-YSP 386
Score = 110 bits (274), Expect = 8e-23
Identities = 55/90 (61%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP
Sbjct: 329 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP------ 382
Query: 362 GYSPSQPGYSPSSTSQYTPQTNDKDERGKD 273
YSP+ P YSP S S P+ + DE K+
Sbjct: 383 SYSPTSPQYSPGSYSPAEPKQQESDEEKKE 412
Score = 108 bits (269), Expect = 3e-22
Identities = 54/78 (69%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = -2
Query: 533 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 360
SSP +SPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 233 SSPGFSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 292
Query: 359 YSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 293 YSPTSPSYSPTSPS-YSP 309
[98][TOP]
>UniRef100_C5E245 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5E245_LACTC
Length = 1740
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1545 SPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1604
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1605 PSYSPTSPSYSPTSPS-YSP 1623
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1566 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1625
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1626 PSYSPTSPSYSPTSPS-YSP 1644
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1587 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1646
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1647 PSYSPTSPSYSPTSPS-YSP 1665
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1608 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1667
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1668 PSYSPTSPSYSPTSPS-YSP 1686
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1629 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1688
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1689 PSYSPTSPSYSPTSPS-YSP 1707
Score = 112 bits (279), Expect = 2e-23
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1650 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1709
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDKDERGKD 273
YSP P YSP S + N+ + +
Sbjct: 1710 PSYSPGSPSYSPGSPKKENDNDNNNNNNNNN 1740
Score = 106 bits (265), Expect = 9e-22
Identities = 52/77 (67%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S +SPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1541 SPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1600
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 1601 SPTSPSYSPTSPS-YSP 1616
Score = 64.7 bits (156), Expect = 4e-09
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPT-SPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 360
SSP+S +PTSP + SP +SP+SP YSP+SP YSP+SP +SP S
Sbjct: 1521 SSPFSGYGD--APTSPGFGGVASPGFSPTSPAYSPTSP-------SYSPTSPSYSPTSPS 1571
Query: 359 YSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1572 YSPTSPSYSPTSPS-YSP 1588
[99][TOP]
>UniRef100_C4Y5N3 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4Y5N3_CLAL4
Length = 281
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 98 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 157
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 158 PSYSPTSPSYSPTSPS-YSP 176
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 119 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 178
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 179 PSYSPTSPSYSPTSPS-YSP 197
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 140 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 199
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 200 PSYSPTSPSYSPTSPS-YSP 218
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 161 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 220
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 221 PSYSPTSPSYSPTSPS-YSP 239
Score = 112 bits (281), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 182 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 241
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 242 PSYSPTSPQYSPTS-PQYSP 260
Score = 112 bits (281), Expect = 1e-23
Identities = 56/85 (65%), Positives = 66/85 (77%), Gaps = 2/85 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SPQ+SP S
Sbjct: 196 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTS 255
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDK 291
YSP P YSP S S + ++K
Sbjct: 256 PQYSPGSPSYSPRSPSYGDKKEDEK 280
Score = 109 bits (273), Expect = 1e-22
Identities = 53/77 (68%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 80 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 139
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 140 SPTSPSYSPTSPS-YSP 155
Score = 103 bits (258), Expect = 6e-21
Identities = 51/77 (66%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S Y TSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 73 SPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 132
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 133 SPTSPSYSPTSPS-YSP 148
Score = 102 bits (254), Expect = 2e-20
Identities = 56/87 (64%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP +YSP+SP S SP YSP+S
Sbjct: 168 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 227
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P +SP S YSP+ P YSP+S QY+P
Sbjct: 228 PSYSPTSPSYSPTSPSYSPTS-PQYSP 253
Score = 98.6 bits (244), Expect = 2e-19
Identities = 51/89 (57%), Positives = 62/89 (69%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSPYS----------PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSP 390
SP+SP+S TSP Y TSP+YSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 54 SPTSPFSYGGASPAFGGATSPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 113
Query: 389 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 114 TSPSYSPTSPSYSPTSPSYSPTSPS-YSP 141
[100][TOP]
>UniRef100_C4VAM1 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01
RepID=C4VAM1_NOSCE
Length = 1612
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1473 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1532
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1533 PSYSPTSPSYSPTSPS-YSP 1551
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1494 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1553
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1554 PSYSPTSPSYSPTSPS-YSP 1572
Score = 112 bits (280), Expect = 2e-23
Identities = 58/91 (63%), Positives = 70/91 (76%), Gaps = 2/91 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1515 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1574
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDKDERGKD 273
YSP+ YSP+S S Y+P KD+ K+
Sbjct: 1575 PSYSPTSLSYSPTSPS-YSPTGYKKDKDKKN 1604
Score = 112 bits (280), Expect = 2e-23
Identities = 54/88 (61%), Positives = 67/88 (76%), Gaps = 2/88 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1522 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1581
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDKDER 282
YSP+ P YSP+ + + N++ R
Sbjct: 1582 LSYSPTSPSYSPTGYKKDKDKKNERKRR 1609
Score = 110 bits (276), Expect = 5e-23
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
S S YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1453 SASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1512
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1513 SYSPTSPSYSPTSPS-YSP 1530
Score = 103 bits (256), Expect = 1e-20
Identities = 50/77 (64%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S Y SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1448 SPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1507
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 1508 SPTSPSYSPTSPS-YSP 1523
Score = 95.1 bits (235), Expect = 3e-18
Identities = 47/76 (61%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYS 354
S +S SP+Y SPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S YS
Sbjct: 1442 SLFSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1501
Query: 353 PSQPGYSPSSTSQYTP 306
P+ P YSP+S S Y+P
Sbjct: 1502 PTSPSYSPTSPS-YSP 1516
Score = 86.7 bits (213), Expect = 1e-15
Identities = 44/76 (57%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYS 354
S YSP +S SPSY SPSYSP+SP+YSP+SP S SP YSP+SP +SP S YS
Sbjct: 1435 SKYSPKLSLFSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1494
Query: 353 PSQPGYSPSSTSQYTP 306
P+ P YSP+S S Y+P
Sbjct: 1495 PTSPSYSPTSPS-YSP 1509
Score = 65.1 bits (157), Expect = 3e-09
Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = -2
Query: 512 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGY 336
SP Y YSP +S SP+Y +SP S SP YSP+SP +SP S YSP+ P Y
Sbjct: 1427 SPAYLAEESKYSPKLSLFSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1486
Query: 335 SPSSTSQYTP 306
SP+S S Y+P
Sbjct: 1487 SPTSPS-YSP 1495
[101][TOP]
>UniRef100_P36594 DNA-directed RNA polymerase II subunit rpb1 n=1
Tax=Schizosaccharomyces pombe RepID=RPB1_SCHPO
Length = 1752
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1628 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1687
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1688 PSYSPTSPSYSPTSPS-YSP 1706
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1649 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1708
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1709 PSYSPTSPSYSPTSPS-YSP 1727
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1670 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1729
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1730 PSYSPTSPSYSPTSPS-YSP 1748
Score = 112 bits (279), Expect = 2e-23
Identities = 54/76 (71%), Positives = 63/76 (82%), Gaps = 2/76 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1677 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1736
Query: 365 TGYSPSQPGYSPSSTS 318
YSP+ P YSP+S S
Sbjct: 1737 PSYSPTSPSYSPTSPS 1752
Score = 110 bits (275), Expect = 6e-23
Identities = 56/87 (64%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+S
Sbjct: 1600 SPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1659
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P +SP S YSP+ P YSP+S S Y+P
Sbjct: 1660 PSYSPTSPSYSPTSPSYSPTSPS-YSP 1685
Score = 110 bits (274), Expect = 8e-23
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYS TSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1586 SPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1645
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1646 PSYSPTSPSYSPTSPS-YSP 1664
Score = 109 bits (272), Expect = 1e-22
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 381
SPSSP Y P+SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP
Sbjct: 1559 SPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSP 1618
Query: 380 QFSP-STGYSPSQPGYSPSSTSQYTP 306
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1619 SYSPTSPSYSPTSPSYSPTSPS-YSP 1643
Score = 92.8 bits (229), Expect = 1e-17
Identities = 47/77 (61%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS-PSTGY 357
S YSP+SP YS TSP+Y P+SPSYSP+SP+YSP+SP S SP YSP+SP +S S Y
Sbjct: 1555 SPSYSPSSPGYS-TSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSY 1613
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 1614 SPTSPSYSPTSPS-YSP 1629
Score = 72.4 bits (176), Expect = 2e-11
Identities = 42/80 (52%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Frame = -2
Query: 533 SSPYSPT-SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
+SP+S SP Y TSPSYSP+SP YS +SP Y PSSP S SP YSP+SP +SP+
Sbjct: 1540 TSPFSSAMSPGYGLTSPSYSPSSPGYS-TSPAYMPSSPSYSPTSPSYSPTSPSYSPT--- 1595
Query: 356 SPSQPGYSPS---STSQYTP 306
SPS SPS ++ Y+P
Sbjct: 1596 SPSYSPTSPSYSATSPSYSP 1615
Score = 61.6 bits (148), Expect = 3e-08
Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Frame = -2
Query: 533 SSPY----SP--TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 372
+SPY SP TSP S SP Y TSPSYSPSSP YS SP Y PSSP
Sbjct: 1528 ASPYKGVQSPGYTSPFSSAMSPGYGLTSPSYSPSSPGYS--------TSPAYMPSSPS-- 1577
Query: 371 PSTGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1578 ----YSPTSPSYSPTSPS-YSP 1594
[102][TOP]
>UniRef100_Q8SSC4 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Encephalitozoon
cuniculi RepID=RPB1_ENCCU
Length = 1599
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1467 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1526
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1527 PSYSPTSPSYSPTSPS-YSP 1545
Score = 113 bits (282), Expect = 1e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1488 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1547
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1548 PSYSPTSPSYSPTSPS-YSP 1566
Score = 103 bits (258), Expect = 6e-21
Identities = 56/95 (58%), Positives = 69/95 (72%), Gaps = 8/95 (8%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1495 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1554
Query: 365 TGYSPSQP---GYSPS---STSQYTPQTNDKDERG 279
YSP+ P SPS S S ++ + K++ G
Sbjct: 1555 PSYSPTSPSYSPTSPSYSVSMSSFSNKNKSKNQDG 1589
Score = 102 bits (253), Expect = 2e-20
Identities = 54/88 (61%), Positives = 64/88 (72%), Gaps = 2/88 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1509 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1568
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDKDER 282
YS S +S + S+ Q DK R
Sbjct: 1569 PSYSVSMSSFSNKNKSK--NQDGDKKRR 1594
Score = 77.4 bits (189), Expect = 6e-13
Identities = 46/104 (44%), Positives = 61/104 (58%), Gaps = 27/104 (25%)
Frame = -2
Query: 536 PSSPY--SPTSPNYSPTSP------------------------SYSPTSPSYSPSSPTYS 435
P++P +P+S ++S +S SYSPTSPSYSP+SP+YS
Sbjct: 1429 PATPVISTPSSDSFSISSGNWSPTHLEMAYSRDLGERLSPTSPSYSPTSPSYSPTSPSYS 1488
Query: 434 PSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
P+SP S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1489 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1531
Score = 60.1 bits (144), Expect = 1e-07
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 25/93 (26%)
Frame = -2
Query: 509 PNYSPTSPSYSPTSPSY------------------------SPSSPTYSPSSPYNSGVSP 402
PN T +P+S S+ SP+SP+YSP+SP S SP
Sbjct: 1426 PNEPATPVISTPSSDSFSISSGNWSPTHLEMAYSRDLGERLSPTSPSYSPTSPSYSPTSP 1485
Query: 401 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1486 SYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1517
[103][TOP]
>UniRef100_P16356 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
elegans RepID=RPB1_CAEEL
Length = 1852
Score = 113 bits (282), Expect = 1e-23
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSPSSP +SPS+
Sbjct: 1606 SPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSS 1665
Query: 362 -GYSPSQPGYSPSSTSQYTP 306
YSPS P YSP+S + Y+P
Sbjct: 1666 PSYSPSSPRYSPTSPT-YSP 1684
Score = 111 bits (278), Expect = 3e-23
Identities = 58/89 (65%), Positives = 69/89 (77%), Gaps = 2/89 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSPSSP+YSPSSP S SP YSP+SP +SP S
Sbjct: 1627 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTS 1686
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDKDERG 279
YSP+ P YSP+S + Y+P + + G
Sbjct: 1687 PTYSPTSPTYSPTSPT-YSPTSPSYESGG 1714
Score = 110 bits (274), Expect = 8e-23
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
SP++ SP SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1600 SPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP 1659
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSPS P YSPSS +Y+P
Sbjct: 1660 SYSPSSPSYSPSS-PRYSP 1677
Score = 110 bits (274), Expect = 8e-23
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SPSSP YSP+SP+YSP+SP YSPTSP+YSP+SPTYSP+SP S SP YSP+SP +
Sbjct: 1655 SPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGG 1714
Query: 362 GYSPSQPGYSPSSTSQYTP 306
GYSPS P YSPSS + Y+P
Sbjct: 1715 GYSPSSPKYSPSSPT-YSP 1732
Score = 107 bits (266), Expect = 7e-22
Identities = 56/86 (65%), Positives = 67/86 (77%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPD------YSPSSP 381
SPSSP YSP+SP YSPTSP+YSPTSP+YSP+SPTYSP+SP S SP YSPSSP
Sbjct: 1662 SPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSP 1721
Query: 380 QFSPST-GYSPSQPGYSPSSTSQYTP 306
++SPS+ YSP+ P YSP+S QY+P
Sbjct: 1722 KYSPSSPTYSPTSPSYSPTS-PQYSP 1746
Score = 106 bits (265), Expect = 9e-22
Identities = 59/98 (60%), Positives = 67/98 (68%), Gaps = 18/98 (18%)
Frame = -2
Query: 539 SPSSP--------YSPTSPNYSPTSP---------SYSPTSPSYSPSSPTYSPSSPYNSG 411
SPSSP YSPTSP+YSPTSP SYSPTSPSYSP+SP+YSP+SP S
Sbjct: 1576 SPSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSP 1635
Query: 410 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 300
SP YSP+SP +SP S YSPS P YSPSS S Y+P +
Sbjct: 1636 TSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPS-YSPSS 1672
Score = 105 bits (262), Expect = 2e-21
Identities = 53/81 (65%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SPSSP YSP+SP YSPTSPSYSPTSP YSP+SP YSPSSP + SP Y+P+SP+ S
Sbjct: 1717 SPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSP 1776
Query: 362 GYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSP+S S YTP +
Sbjct: 1777 QYSPTSPTYSPTSPS-YTPSS 1796
Score = 104 bits (259), Expect = 5e-21
Identities = 56/88 (63%), Positives = 66/88 (75%), Gaps = 8/88 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT------YSPSSPYNSGVSPDYSPSSP 381
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP+ YSPSSP S SP YSP+SP
Sbjct: 1676 SPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSP 1735
Query: 380 QFSP-STGYSPSQPGYSPSSTSQYTPQT 300
+SP S YSP+ P YSPSS + YTP +
Sbjct: 1736 SYSPTSPQYSPTSPQYSPSSPT-YTPSS 1762
Score = 100 bits (248), Expect = 9e-20
Identities = 50/80 (62%), Positives = 60/80 (75%), Gaps = 2/80 (2%)
Frame = -2
Query: 533 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 360
SSP YSPTSP YSPTSPSY+P+SP YSP+SPTY+PS G S YSP+SP +SPS+
Sbjct: 1774 SSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPGTSAQYSPTSPTYSPSSPT 1833
Query: 359 YSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSPSS + Y P +
Sbjct: 1834 YSPASPSYSPSSPT-YDPNS 1852
Score = 93.2 bits (230), Expect = 1e-17
Identities = 54/99 (54%), Positives = 66/99 (66%), Gaps = 15/99 (15%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSP------SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS-- 387
SPSSP Y+P+SP Y+PTSP YSPTSP+YSP+SP+Y+PSSP S SP Y+PS
Sbjct: 1752 SPSSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPS 1811
Query: 386 -----SPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDKD 288
S Q+SP S YSPS P YSP+S S Y+P + D
Sbjct: 1812 EQPGTSAQYSPTSPTYSPSSPTYSPASPS-YSPSSPTYD 1849
Score = 92.8 bits (229), Expect = 1e-17
Identities = 48/85 (56%), Positives = 59/85 (69%), Gaps = 10/85 (11%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPS---------SPTYSPSSPYNSGVSPDYSPSSPQFS 372
YSP+SP +S TSP YSPTSPSYSP+ SP+YSP+SP S SP YSP+SP +S
Sbjct: 1575 YSPSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYS 1634
Query: 371 P-STGYSPSQPGYSPSSTSQYTPQT 300
P S YSP+ P YSP+S S Y+P +
Sbjct: 1635 PTSPSYSPTSPSYSPTSPS-YSPSS 1658
Score = 90.1 bits (222), Expect = 9e-17
Identities = 53/95 (55%), Positives = 64/95 (67%), Gaps = 12/95 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSP----------SYSPSSPTYSPSSPYNSGVSPDYS 393
SPSSP YSPTSP+YSPTSP YSPTSP PSSPTY+P+SP SP YS
Sbjct: 1724 SPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYT---PSSPTYNPTSPRGFS-SPQYS 1779
Query: 392 PSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDK 291
P+SP +SP S Y+PS P YSP+S + YTP +++
Sbjct: 1780 PTSPTYSPTSPSYTPSSPQYSPTSPT-YTPSPSEQ 1813
Score = 89.0 bits (219), Expect = 2e-16
Identities = 54/94 (57%), Positives = 65/94 (69%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSP-YSPTS---PNYSPTSPS------YSPTSPSYSPSSPTYSPSSPYNSGVSPDYSP 390
SP+SP YSPTS SPTSPS YSP+SP YSPSSPTYSP+SP S SP YSP
Sbjct: 1690 SPTSPTYSPTSPTY---SPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSP 1746
Query: 389 SSPQFSPST-GYSPSQPGYSPS-----STSQYTP 306
+SPQ+SPS+ Y+PS P Y+P+ S+ QY+P
Sbjct: 1747 TSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSP 1780
Score = 65.1 bits (157), Expect = 3e-09
Identities = 44/98 (44%), Positives = 55/98 (56%), Gaps = 20/98 (20%)
Frame = -2
Query: 539 SPSSPYSPT-------SP----NYSPTSP-----SYSPTSPSYSPSSP-TYSPSSPYNSG 411
SP + +SP SP +SP SP + SP +PSY SP YSPSSP S
Sbjct: 1525 SPGAGFSPAGNTDGGASPFNEGGWSPASPGDPLGALSPRTPSYGGMSPGVYSPSSPQFSM 1584
Query: 410 VSPDYSPSSPQFSPST---GYSPSQPGYSPSSTSQYTP 306
SP YSP+SP +SP++ G SP P YSP+S S Y+P
Sbjct: 1585 TSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPS-YSP 1621
[104][TOP]
>UniRef100_B3RM26 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
RepID=B3RM26_TRIAD
Length = 1784
Score = 112 bits (281), Expect = 1e-23
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP++SP S
Sbjct: 1684 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTS 1743
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1744 PSYSPTSPRYSPTSPS-YSP 1762
Score = 112 bits (280), Expect = 2e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP++SP S
Sbjct: 1670 SPTSPKYSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPTS 1729
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1730 PSYSPTSPRYSPTSPS-YSP 1748
Score = 112 bits (279), Expect = 2e-23
Identities = 56/80 (70%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1642 SPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPKYSPTSPRYSPTSPSYSPTSPSYSPTS 1701
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1702 PSYSPTSPSYSPTSPS-YSP 1720
Score = 111 bits (278), Expect = 3e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP++SP S
Sbjct: 1621 SPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPKYSPTS 1680
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1681 PRYSPTSPSYSPTSPS-YSP 1699
Score = 110 bits (274), Expect = 8e-23
Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1593 SPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTS 1652
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1653 PRYSPTSPSYSPTSPS-YSP 1671
Score = 109 bits (273), Expect = 1e-22
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1614 SPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTS 1673
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1674 PKYSPTSPRYSPTSPS-YSP 1692
Score = 108 bits (271), Expect = 2e-22
Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1663 SPTSPSYSPTSPKYSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1722
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 1723 PRYSPTSPSYSPTS-PRYSP 1741
Score = 108 bits (269), Expect = 3e-22
Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1705 SPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTS 1764
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S Y+P
Sbjct: 1765 PSYSPTSPSYSPTS-PDYSP 1783
Score = 106 bits (265), Expect = 9e-22
Identities = 51/73 (69%), Positives = 59/73 (80%), Gaps = 2/73 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1712 SPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTS 1771
Query: 365 TGYSPSQPGYSPS 327
YSP+ P YSP+
Sbjct: 1772 PSYSPTSPDYSPN 1784
Score = 105 bits (263), Expect = 2e-21
Identities = 52/76 (68%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYS 354
S YSPTSP+YSPTSP YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP S YS
Sbjct: 1590 SKYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYS 1649
Query: 353 PSQPGYSPSSTSQYTP 306
P+ P YSP+S S Y+P
Sbjct: 1650 PTSPRYSPTSPS-YSP 1664
Score = 63.2 bits (152), Expect = 1e-08
Identities = 45/98 (45%), Positives = 53/98 (54%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSPY--SPTSPNYSPTSPS---------------YSPTSPSYS---PSSPTYSPSSPYN 417
PSSPY SPT + S YSPTSP P+SP YSP+SP
Sbjct: 1557 PSSPYMQSPTDITFYVAFQSIILTVESKLLTDFSKYSPTSP---SYSPTSPRYSPTSPSY 1613
Query: 416 SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1614 SPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPS-YSP 1650
[105][TOP]
>UniRef100_UPI0000E12351 Os05g0151000 n=1 Tax=Oryza sativa Japonica Group RepID=UPI0000E12351
Length = 2085
Score = 112 bits (280), Expect = 2e-23
Identities = 57/85 (67%), Positives = 65/85 (76%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
SPS YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S S YSP+SP +SP S
Sbjct: 1696 SPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSP 1755
Query: 362 GYSPSQPGYSPSSTS------QYTP 306
GYSP+ P YSPSS S +YTP
Sbjct: 1756 GYSPTSPSYSPSSPSYNPSSVKYTP 1780
Score = 109 bits (272), Expect = 1e-22
Identities = 57/84 (67%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSP--NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP YSPTSP NYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+S +SP
Sbjct: 1686 SPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSP 1745
Query: 368 -STGYSPSQPGYSPSSTSQYTPQT 300
S YSP+ PGYSP+S S Y+P +
Sbjct: 1746 TSPAYSPTSPGYSPTSPS-YSPSS 1768
Score = 105 bits (262), Expect = 2e-21
Identities = 52/86 (60%), Positives = 63/86 (73%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTS +YSP+SP YSP+SP S SP YSPSSP ++PS+
Sbjct: 1716 SPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSS 1775
Query: 362 -------GYSPSQPGYSPSSTSQYTP 306
YSPS P Y S++ Y+P
Sbjct: 1776 VKYTPSHAYSPSSPNYYSSTSPTYSP 1801
Score = 94.0 bits (232), Expect = 6e-18
Identities = 52/86 (60%), Positives = 64/86 (74%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGVSP--DYSPSSPQF 375
SP+SP YSPTSP Y+PTS +YSPTSPSY+P+SP +YSP+SP S SP YSP+SP +
Sbjct: 1633 SPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSY 1692
Query: 374 ---SPSTGYSPSQPGYSPSSTSQYTP 306
SPS YSP+ P YSP+S S Y+P
Sbjct: 1693 SPTSPSYNYSPTSPSYSPTSPS-YSP 1717
Score = 93.2 bits (230), Expect = 1e-17
Identities = 55/103 (53%), Positives = 68/103 (66%), Gaps = 22/103 (21%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSP--SYSPSSPTYSPSSP-----------------Y 420
SP+SP Y+PTS YSPTSPSY+PTSP SYSP+SP+YSP+SP Y
Sbjct: 1640 SPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSY 1699
Query: 419 N-SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTN 297
N S SP YSP+SP +SP S YSP+ P YSP+S S Y+P ++
Sbjct: 1700 NYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPTSS 1741
Score = 91.3 bits (225), Expect = 4e-17
Identities = 53/92 (57%), Positives = 62/92 (67%), Gaps = 9/92 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGV-----SPDYSPSSP 381
SP+SP YSPTS YSPTSP+YSPTSP YSP+SP+YSPSSP YN S YSPSSP
Sbjct: 1730 SPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSP 1789
Query: 380 QFSPSTG--YSPSQPGYSPSSTSQYTPQTNDK 291
+ ST YSP+ P YS S S Y+P ++
Sbjct: 1790 NYYSSTSPTYSPTSPSYSQPSPS-YSPTRGEE 1820
Score = 90.9 bits (224), Expect = 5e-17
Identities = 50/99 (50%), Positives = 61/99 (61%), Gaps = 21/99 (21%)
Frame = -2
Query: 539 SPSSP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSP+SP YSPTS SYSPTSP YSP+SP Y+P+S S SP Y+P+S
Sbjct: 1605 SPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTS 1664
Query: 383 PQF------------SPSTGYSPSQPGYSPSSTS-QYTP 306
P + SPS YSP+ P YSP+S S Y+P
Sbjct: 1665 PSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSP 1703
Score = 89.0 bits (219), Expect = 2e-16
Identities = 48/87 (55%), Positives = 58/87 (66%), Gaps = 11/87 (12%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSP-------SYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 375
S P+SPTSP YS TSP YSP+SP SYSP+SP YSP+SP + S YSP+SP +
Sbjct: 1601 SLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSY 1660
Query: 374 ---SPSTGYSPSQPGYSPSSTS-QYTP 306
SPS YSP+ P YSP+S S Y+P
Sbjct: 1661 NPTSPSYSYSPTSPSYSPTSPSYSYSP 1687
Score = 86.3 bits (212), Expect = 1e-15
Identities = 48/89 (53%), Positives = 59/89 (66%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP---------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 387
SP+SP Y PTS +SPTSP YS TSP YSPSSP YSP+S S SP YSP+
Sbjct: 1583 SPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPT 1642
Query: 386 SPQFSP-STGYSPSQPGYSPSSTS-QYTP 306
SP ++P S+ YSP+ P Y+P+S S Y+P
Sbjct: 1643 SPVYNPTSSAYSPTSPSYNPTSPSYSYSP 1671
Score = 71.2 bits (173), Expect = 4e-11
Identities = 46/106 (43%), Positives = 56/106 (52%), Gaps = 28/106 (26%)
Frame = -2
Query: 539 SPSSPYSPTSP-------------NYSPTSPSYSP--------TSPSYSPSSPTYSPSSP 423
S YSP+ P Y+P SP YSP TSPSY P+S +SP+SP
Sbjct: 1550 SSGGGYSPSPPVCTPGPGSFTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSP 1609
Query: 422 YNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS------TSQYTP 306
S SP YSPSSP +SP S YSP+ P YSP+S +S Y+P
Sbjct: 1610 IYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSP 1655
Score = 53.9 bits (128), Expect = 7e-06
Identities = 39/99 (39%), Positives = 50/99 (50%), Gaps = 26/99 (26%)
Frame = -2
Query: 524 YSPTSP--NYSPTSPS-YSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG-- 360
+SP S NY+P+S YSP+ P +P +++ SSPYN VSP YSP+SP P T
Sbjct: 1538 FSPVSSPGNYTPSSGGGYSPSPPVCTPGPGSFTSSSPYNP-VSPFYSPASPLSCPLTSPS 1596
Query: 359 ---------------------YSPSQPGYSPSSTSQYTP 306
YSPS P YSP+S S Y+P
Sbjct: 1597 YVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLS-YSP 1634
[106][TOP]
>UniRef100_Q5WMZ9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q5WMZ9_ORYSJ
Length = 1741
Score = 112 bits (280), Expect = 2e-23
Identities = 57/85 (67%), Positives = 65/85 (76%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
SPS YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S S YSP+SP +SP S
Sbjct: 1643 SPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSP 1702
Query: 362 GYSPSQPGYSPSSTS------QYTP 306
GYSP+ P YSPSS S +YTP
Sbjct: 1703 GYSPTSPSYSPSSPSYNPSSVKYTP 1727
Score = 109 bits (272), Expect = 1e-22
Identities = 57/84 (67%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSP--NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP YSPTSP NYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+S +SP
Sbjct: 1633 SPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSP 1692
Query: 368 -STGYSPSQPGYSPSSTSQYTPQT 300
S YSP+ PGYSP+S S Y+P +
Sbjct: 1693 TSPAYSPTSPGYSPTSPS-YSPSS 1715
Score = 102 bits (253), Expect = 2e-20
Identities = 52/78 (66%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTS +YSP+SP YSP+SP S SP YSPSSP ++PS+
Sbjct: 1663 SPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSS 1722
Query: 362 -GYSPSQPGYSPSSTSQY 312
Y+PS YSPSS + Y
Sbjct: 1723 VKYTPSH-AYSPSSPNYY 1739
Score = 94.0 bits (232), Expect = 6e-18
Identities = 52/86 (60%), Positives = 64/86 (74%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGVSP--DYSPSSPQF 375
SP+SP YSPTSP Y+PTS +YSPTSPSY+P+SP +YSP+SP S SP YSP+SP +
Sbjct: 1580 SPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSY 1639
Query: 374 ---SPSTGYSPSQPGYSPSSTSQYTP 306
SPS YSP+ P YSP+S S Y+P
Sbjct: 1640 SPTSPSYNYSPTSPSYSPTSPS-YSP 1664
Score = 93.2 bits (230), Expect = 1e-17
Identities = 55/103 (53%), Positives = 68/103 (66%), Gaps = 22/103 (21%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSP--SYSPSSPTYSPSSP-----------------Y 420
SP+SP Y+PTS YSPTSPSY+PTSP SYSP+SP+YSP+SP Y
Sbjct: 1587 SPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSY 1646
Query: 419 N-SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTN 297
N S SP YSP+SP +SP S YSP+ P YSP+S S Y+P ++
Sbjct: 1647 NYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPTSS 1688
Score = 90.9 bits (224), Expect = 5e-17
Identities = 50/99 (50%), Positives = 61/99 (61%), Gaps = 21/99 (21%)
Frame = -2
Query: 539 SPSSP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSP+SP YSPTS SYSPTSP YSP+SP Y+P+S S SP Y+P+S
Sbjct: 1552 SPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTS 1611
Query: 383 PQF------------SPSTGYSPSQPGYSPSSTS-QYTP 306
P + SPS YSP+ P YSP+S S Y+P
Sbjct: 1612 PSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSP 1650
Score = 89.0 bits (219), Expect = 2e-16
Identities = 48/87 (55%), Positives = 58/87 (66%), Gaps = 11/87 (12%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSP-------SYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 375
S P+SPTSP YS TSP YSP+SP SYSP+SP YSP+SP + S YSP+SP +
Sbjct: 1548 SLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSY 1607
Query: 374 ---SPSTGYSPSQPGYSPSSTS-QYTP 306
SPS YSP+ P YSP+S S Y+P
Sbjct: 1608 NPTSPSYSYSPTSPSYSPTSPSYSYSP 1634
Score = 86.3 bits (212), Expect = 1e-15
Identities = 48/89 (53%), Positives = 59/89 (66%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP---------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 387
SP+SP Y PTS +SPTSP YS TSP YSPSSP YSP+S S SP YSP+
Sbjct: 1530 SPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPT 1589
Query: 386 SPQFSP-STGYSPSQPGYSPSSTS-QYTP 306
SP ++P S+ YSP+ P Y+P+S S Y+P
Sbjct: 1590 SPVYNPTSSAYSPTSPSYNPTSPSYSYSP 1618
Score = 71.2 bits (173), Expect = 4e-11
Identities = 46/106 (43%), Positives = 56/106 (52%), Gaps = 28/106 (26%)
Frame = -2
Query: 539 SPSSPYSPTSP-------------NYSPTSPSYSP--------TSPSYSPSSPTYSPSSP 423
S YSP+ P Y+P SP YSP TSPSY P+S +SP+SP
Sbjct: 1497 SSGGGYSPSPPVCTPGPGSFTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSP 1556
Query: 422 YNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS------TSQYTP 306
S SP YSPSSP +SP S YSP+ P YSP+S +S Y+P
Sbjct: 1557 IYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSP 1602
Score = 53.9 bits (128), Expect = 7e-06
Identities = 39/99 (39%), Positives = 50/99 (50%), Gaps = 26/99 (26%)
Frame = -2
Query: 524 YSPTSP--NYSPTSPS-YSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG-- 360
+SP S NY+P+S YSP+ P +P +++ SSPYN VSP YSP+SP P T
Sbjct: 1485 FSPVSSPGNYTPSSGGGYSPSPPVCTPGPGSFTSSSPYNP-VSPFYSPASPLSCPLTSPS 1543
Query: 359 ---------------------YSPSQPGYSPSSTSQYTP 306
YSPS P YSP+S S Y+P
Sbjct: 1544 YVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLS-YSP 1581
[107][TOP]
>UniRef100_Q0DKN9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q0DKN9_ORYSJ
Length = 1834
Score = 112 bits (280), Expect = 2e-23
Identities = 57/85 (67%), Positives = 65/85 (76%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
SPS YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S S YSP+SP +SP S
Sbjct: 1696 SPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSP 1755
Query: 362 GYSPSQPGYSPSSTS------QYTP 306
GYSP+ P YSPSS S +YTP
Sbjct: 1756 GYSPTSPSYSPSSPSYNPSSVKYTP 1780
Score = 109 bits (272), Expect = 1e-22
Identities = 57/84 (67%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSP--NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP YSPTSP NYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+S +SP
Sbjct: 1686 SPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSP 1745
Query: 368 -STGYSPSQPGYSPSSTSQYTPQT 300
S YSP+ PGYSP+S S Y+P +
Sbjct: 1746 TSPAYSPTSPGYSPTSPS-YSPSS 1768
Score = 105 bits (262), Expect = 2e-21
Identities = 52/86 (60%), Positives = 63/86 (73%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTS +YSP+SP YSP+SP S SP YSPSSP ++PS+
Sbjct: 1716 SPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSS 1775
Query: 362 -------GYSPSQPGYSPSSTSQYTP 306
YSPS P Y S++ Y+P
Sbjct: 1776 VKYTPSHAYSPSSPNYYSSTSPTYSP 1801
Score = 94.0 bits (232), Expect = 6e-18
Identities = 52/86 (60%), Positives = 64/86 (74%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGVSP--DYSPSSPQF 375
SP+SP YSPTSP Y+PTS +YSPTSPSY+P+SP +YSP+SP S SP YSP+SP +
Sbjct: 1633 SPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSY 1692
Query: 374 ---SPSTGYSPSQPGYSPSSTSQYTP 306
SPS YSP+ P YSP+S S Y+P
Sbjct: 1693 SPTSPSYNYSPTSPSYSPTSPS-YSP 1717
Score = 93.2 bits (230), Expect = 1e-17
Identities = 55/103 (53%), Positives = 68/103 (66%), Gaps = 22/103 (21%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSP--SYSPSSPTYSPSSP-----------------Y 420
SP+SP Y+PTS YSPTSPSY+PTSP SYSP+SP+YSP+SP Y
Sbjct: 1640 SPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSY 1699
Query: 419 N-SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTN 297
N S SP YSP+SP +SP S YSP+ P YSP+S S Y+P ++
Sbjct: 1700 NYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPTSS 1741
Score = 92.8 bits (229), Expect = 1e-17
Identities = 54/94 (57%), Positives = 64/94 (68%), Gaps = 9/94 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGV-----SPDYSPSSP 381
SP+SP YSPTS YSPTSP+YSPTSP YSP+SP+YSPSSP YN S YSPSSP
Sbjct: 1730 SPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSP 1789
Query: 380 QFSPSTG--YSPSQPGYSPSSTSQYTPQTNDKDE 285
+ ST YSP+ P YS S S Y+P + ++E
Sbjct: 1790 NYYSSTSPTYSPTSPSYSQPSPS-YSPTSRVEEE 1822
Score = 90.9 bits (224), Expect = 5e-17
Identities = 50/99 (50%), Positives = 61/99 (61%), Gaps = 21/99 (21%)
Frame = -2
Query: 539 SPSSP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSP+SP YSPTS SYSPTSP YSP+SP Y+P+S S SP Y+P+S
Sbjct: 1605 SPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTS 1664
Query: 383 PQF------------SPSTGYSPSQPGYSPSSTS-QYTP 306
P + SPS YSP+ P YSP+S S Y+P
Sbjct: 1665 PSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSP 1703
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/90 (52%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSPSYSP+SPSY+PSS Y+PS Y+ YS +SP +SP S
Sbjct: 1744 SPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSPNYYSSTSPTYSPTS 1803
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDKDERGK 276
YS P YSP+S + ++E K
Sbjct: 1804 PSYSQPSPSYSPTSRVEEEAHEEAEEEEPK 1833
Score = 89.0 bits (219), Expect = 2e-16
Identities = 48/87 (55%), Positives = 58/87 (66%), Gaps = 11/87 (12%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSP-------SYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 375
S P+SPTSP YS TSP YSP+SP SYSP+SP YSP+SP + S YSP+SP +
Sbjct: 1601 SLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSY 1660
Query: 374 ---SPSTGYSPSQPGYSPSSTS-QYTP 306
SPS YSP+ P YSP+S S Y+P
Sbjct: 1661 NPTSPSYSYSPTSPSYSPTSPSYSYSP 1687
Score = 86.3 bits (212), Expect = 1e-15
Identities = 48/89 (53%), Positives = 59/89 (66%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP---------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 387
SP+SP Y PTS +SPTSP YS TSP YSPSSP YSP+S S SP YSP+
Sbjct: 1583 SPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPT 1642
Query: 386 SPQFSP-STGYSPSQPGYSPSSTS-QYTP 306
SP ++P S+ YSP+ P Y+P+S S Y+P
Sbjct: 1643 SPVYNPTSSAYSPTSPSYNPTSPSYSYSP 1671
Score = 71.2 bits (173), Expect = 4e-11
Identities = 46/106 (43%), Positives = 56/106 (52%), Gaps = 28/106 (26%)
Frame = -2
Query: 539 SPSSPYSPTSP-------------NYSPTSPSYSP--------TSPSYSPSSPTYSPSSP 423
S YSP+ P Y+P SP YSP TSPSY P+S +SP+SP
Sbjct: 1550 SSGGGYSPSPPVCTPGPGSFTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSP 1609
Query: 422 YNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS------TSQYTP 306
S SP YSPSSP +SP S YSP+ P YSP+S +S Y+P
Sbjct: 1610 IYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSP 1655
Score = 53.9 bits (128), Expect = 7e-06
Identities = 39/99 (39%), Positives = 50/99 (50%), Gaps = 26/99 (26%)
Frame = -2
Query: 524 YSPTSP--NYSPTSPS-YSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG-- 360
+SP S NY+P+S YSP+ P +P +++ SSPYN VSP YSP+SP P T
Sbjct: 1538 FSPVSSPGNYTPSSGGGYSPSPPVCTPGPGSFTSSSPYNP-VSPFYSPASPLSCPLTSPS 1596
Query: 359 ---------------------YSPSQPGYSPSSTSQYTP 306
YSPS P YSP+S S Y+P
Sbjct: 1597 YVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLS-YSP 1634
[108][TOP]
>UniRef100_P35074 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
briggsae RepID=RPB1_CAEBR
Length = 1853
Score = 112 bits (279), Expect = 2e-23
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSPSSP++SP S
Sbjct: 1624 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTS 1683
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1684 PTYSPTSPTYSPTSPT-YSP 1702
Score = 111 bits (277), Expect = 4e-23
Identities = 56/80 (70%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1610 SPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1669
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS P YSP+S + Y+P
Sbjct: 1670 PSYSPSSPRYSPTSPT-YSP 1688
Score = 111 bits (277), Expect = 4e-23
Identities = 55/80 (68%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SPS+
Sbjct: 1617 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSS 1676
Query: 362 -GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1677 PRYSPTSPTYSPTSPT-YSP 1695
Score = 111 bits (277), Expect = 4e-23
Identities = 58/90 (64%), Positives = 67/90 (74%), Gaps = 12/90 (13%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPTSPSYSPSSP YSP+SP S SP YSP+SP +SP++
Sbjct: 1645 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTS 1704
Query: 362 -----------GYSPSQPGYSPSSTSQYTP 306
GYSPS P YSPSS + Y+P
Sbjct: 1705 PTYSPTSPSYEGYSPSSPKYSPSSPT-YSP 1733
Score = 107 bits (266), Expect = 7e-22
Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 5/83 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPD---YSPSSPQFS 372
SP+SP YSP+SP YSPTSP+YSPTSP+YSP+SPTYSP+SP S SP YSPSSP++S
Sbjct: 1666 SPTSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYEGYSPSSPKYS 1725
Query: 371 PST-GYSPSQPGYSPSSTSQYTP 306
PS+ YSP+ P YSP+S QY+P
Sbjct: 1726 PSSPTYSPTSPSYSPTS-PQYSP 1747
Score = 106 bits (264), Expect = 1e-21
Identities = 56/88 (63%), Positives = 67/88 (76%), Gaps = 10/88 (11%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSY---SPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 372
SP+SP YSPTSP YSPTSPSY SP+SP YSPSSPTYSP+SP S SP YSP+SPQ+S
Sbjct: 1694 SPTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYS 1753
Query: 371 PST-GYSPSQPGYSPS-----STSQYTP 306
PS+ Y+PS P Y+P+ S+ QY+P
Sbjct: 1754 PSSPTYTPSSPTYNPTSPRAFSSPQYSP 1781
Score = 105 bits (263), Expect = 2e-21
Identities = 53/81 (65%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SPSSP YSP+SP YSPTSPSYSPTSP YSP+SP YSPSSP + SP Y+P+SP+ S
Sbjct: 1718 SPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRAFSSP 1777
Query: 362 GYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSP+S S YTP +
Sbjct: 1778 QYSPTSPTYSPTSPS-YTPSS 1797
Score = 105 bits (262), Expect = 2e-21
Identities = 56/85 (65%), Positives = 66/85 (77%), Gaps = 5/85 (5%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT---YSPSSPYNSGVSPDYSPSSPQFS 372
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP+ YSPSSP S SP YSP+SP +S
Sbjct: 1680 SPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPTYSPTSPSYS 1739
Query: 371 P-STGYSPSQPGYSPSSTSQYTPQT 300
P S YSP+ P YSPSS + YTP +
Sbjct: 1740 PTSPQYSPTSPQYSPSSPT-YTPSS 1763
Score = 103 bits (256), Expect = 1e-20
Identities = 54/85 (63%), Positives = 65/85 (76%), Gaps = 5/85 (5%)
Frame = -2
Query: 539 SPSSP-YSPTSPNY---SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 372
SP+SP YSPTSP + SP SPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +S
Sbjct: 1593 SPTSPSYSPTSPAHHGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1652
Query: 371 P-STGYSPSQPGYSPSSTSQYTPQT 300
P S YSP+ P YSP+S S Y+P +
Sbjct: 1653 PTSPSYSPTSPSYSPTSPS-YSPSS 1676
Score = 102 bits (253), Expect = 2e-20
Identities = 52/79 (65%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Frame = -2
Query: 533 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 360
SSP YSPTSP YSPTSPSY+P+SP YSP+SPTY+PS G S YSPSSP +SPS+
Sbjct: 1775 SSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPADQPGTSNQYSPSSPTYSPSSPT 1834
Query: 359 YSPSQPGYSPSSTSQYTPQ 303
YSP+ P YSPSS + Y PQ
Sbjct: 1835 YSPASPSYSPSSPT-YDPQ 1852
Score = 100 bits (250), Expect = 5e-20
Identities = 61/114 (53%), Positives = 67/114 (58%), Gaps = 36/114 (31%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YN----------------- 417
SPSSP YSPTSP+YSPTSP YSPTSP YSPSSPTY+PSSP YN
Sbjct: 1725 SPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRAFSSPQYSPTSP 1784
Query: 416 --SGVSPDYSPSSPQFSP---------------STGYSPSQPGYSPSSTSQYTP 306
S SP Y+PSSPQ+SP S YSPS P YSPSS + Y+P
Sbjct: 1785 TYSPTSPSYTPSSPQYSPTSPTYTPSPADQPGTSNQYSPSSPTYSPSSPT-YSP 1837
Score = 100 bits (248), Expect = 9e-20
Identities = 54/90 (60%), Positives = 65/90 (72%), Gaps = 12/90 (13%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPT----------SPSYSPSSPTYSPSSPYNSGVSPDYS 393
SP+SP +S TSP+YSPTSPSYSPT SPSYSP+SP+YSP+SP S SP YS
Sbjct: 1579 SPASPGFSMTSPHYSPTSPSYSPTSPAHHGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYS 1638
Query: 392 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
P+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1639 PTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1667
Score = 91.7 bits (226), Expect = 3e-17
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 11/84 (13%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPS----------SPTYSPSSPYNSGVSPDYSPSSPQF 375
YSP SP +S TSP YSPTSPSYSP+ SP+YSP+SP S SP YSP+SP +
Sbjct: 1578 YSPASPGFSMTSPHYSPTSPSYSPTSPAHHGQSPVSPSYSPTSPSYSPTSPSYSPTSPSY 1637
Query: 374 SP-STGYSPSQPGYSPSSTSQYTP 306
SP S YSP+ P YSP+S S Y+P
Sbjct: 1638 SPTSPSYSPTSPSYSPTSPS-YSP 1660
Score = 70.9 bits (172), Expect = 6e-11
Identities = 38/65 (58%), Positives = 44/65 (67%), Gaps = 8/65 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSP-------TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
+PSSP YSPTSP Y+P TS YSP+SP+YSPSSPTYSP+ SP YSPSS
Sbjct: 1794 TPSSPQYSPTSPTYTPSPADQPGTSNQYSPSSPTYSPSSPTYSPA-------SPSYSPSS 1846
Query: 383 PQFSP 369
P + P
Sbjct: 1847 PTYDP 1851
Score = 63.2 bits (152), Expect = 1e-08
Identities = 43/99 (43%), Positives = 56/99 (56%), Gaps = 21/99 (21%)
Frame = -2
Query: 539 SPSSPYSPT-------SP----NYSPTSP-----SYSPTSPSYSPSSP-TYSPSSPYNSG 411
SPS+ +SP SP +SP SP + SP +P+Y SP YSP+SP S
Sbjct: 1528 SPSAGFSPAGNLDGGASPFNEGGWSPASPGDPLGALSPRTPAYGGMSPGVYSPASPGFSM 1587
Query: 410 VSPDYSPSSPQFSPST----GYSPSQPGYSPSSTSQYTP 306
SP YSP+SP +SP++ G SP P YSP+S S Y+P
Sbjct: 1588 TSPHYSPTSPSYSPTSPAHHGQSPVSPSYSPTSPS-YSP 1625
Score = 62.8 bits (151), Expect = 2e-08
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSS 426
S+ YSP+SP YSP+SP+YSP SPSYSPSSPTY P +
Sbjct: 1818 SNQYSPSSPTYSPSSPTYSPASPSYSPSSPTYDPQN 1853
[109][TOP]
>UniRef100_C5LSN8 P35 antigen, putative (Fragment) n=1 Tax=Perkinsus marinus ATCC
50983 RepID=C5LSN8_9ALVE
Length = 170
Score = 111 bits (278), Expect = 3e-23
Identities = 55/94 (58%), Positives = 65/94 (69%), Gaps = 9/94 (9%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP
Sbjct: 58 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPAYSPTS 117
Query: 368 ------STGYSPSQPGYSPSSTSQYTPQTNDKDE 285
S YSP+ P YSP+S + Y P DE
Sbjct: 118 PAYSPTSPAYSPTSPAYSPTSPAYYHPLVTSSDE 151
Score = 107 bits (266), Expect = 7e-22
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 2 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 61
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 62 PAYSPTSPAYSPTSPA-YSP 80
Score = 107 bits (266), Expect = 7e-22
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 23 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 82
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 83 PAYSPTSPAYSPTSPA-YSP 101
Score = 107 bits (266), Expect = 7e-22
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 44 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 103
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 104 PSYSPTSPAYSPTSPA-YSP 122
Score = 102 bits (255), Expect = 1e-20
Identities = 49/74 (66%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 348
YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S YSP+
Sbjct: 1 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 60
Query: 347 QPGYSPSSTSQYTP 306
P YSP+S + Y+P
Sbjct: 61 SPAYSPTSPA-YSP 73
Score = 97.4 bits (241), Expect = 6e-19
Identities = 51/92 (55%), Positives = 61/92 (66%), Gaps = 18/92 (19%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP YSPTSP+YSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP++
Sbjct: 79 SPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 138
Query: 362 -----------------GYSPSQPGYSPSSTS 318
YSP+ P YS +S S
Sbjct: 139 PAYYHPLVTSSDEGPVVRYSPTSPAYSNTSPS 170
[110][TOP]
>UniRef100_B6AG69 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
RepID=B6AG69_9CRYT
Length = 1927
Score = 111 bits (278), Expect = 3e-23
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP+YSPTSP YSP+SP YSP+SP+ S SP+YSP+SP +SP S
Sbjct: 1735 SPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTS 1794
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS P YSP+S S Y P
Sbjct: 1795 PNYSPSSPHYSPTSPS-YNP 1813
Score = 111 bits (277), Expect = 4e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSP+YSPTSP YSP+SP YSPSSP+ S SP Y+P+SP +SPS+
Sbjct: 1763 SPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPSSPHYSPTSPSYNPASPNYSPSS 1822
Query: 362 -GYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSPSS QY P
Sbjct: 1823 PHYNPASPNYSPSS-PQYNP 1841
Score = 111 bits (277), Expect = 4e-23
Identities = 53/82 (64%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSPNYSP+SP YSPTSPSY+P+SP YSPSSP+ + SP+YSPSSPQ++P+
Sbjct: 1784 SPTSPHYSPTSPNYSPSSPHYSPTSPSYNPASPNYSPSSPHYNPASPNYSPSSPQYNPAL 1843
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSPS P Y+P+S + Y+P +
Sbjct: 1844 PNYSPSSPQYNPTSPN-YSPSS 1864
Score = 110 bits (276), Expect = 5e-23
Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP+YSPTSP YSP+SP YSP+SP+ S SP+YSPSSP +SP S
Sbjct: 1749 SPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPSSPHYSPTS 1808
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSPSS Y P
Sbjct: 1809 PSYNPASPNYSPSS-PHYNP 1827
Score = 110 bits (274), Expect = 8e-23
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSP YSPTSP YSP+SP YSP+SP+ S SP+YSP+SP +SP S
Sbjct: 1707 SPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTS 1766
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1767 PNYSPTSPHYSPTSPN-YSP 1785
Score = 109 bits (273), Expect = 1e-22
Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSP+YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1700 SPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTS 1759
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S Y+P
Sbjct: 1760 PHYSPTSPNYSPTS-PHYSP 1778
Score = 109 bits (272), Expect = 1e-22
Identities = 53/82 (64%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP+YSP+SP +SP S
Sbjct: 1721 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTS 1780
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSP+S + Y+P +
Sbjct: 1781 PNYSPTSPHYSPTSPN-YSPSS 1801
Score = 108 bits (270), Expect = 2e-22
Identities = 53/82 (64%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSPNYSPTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1742 SPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPSS 1801
Query: 362 -GYSPSQPGYSPSSTSQYTPQT 300
YSP+ P Y+P+S + Y+P +
Sbjct: 1802 PHYSPTSPSYNPASPN-YSPSS 1822
Score = 108 bits (269), Expect = 3e-22
Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
P SP YSPTSPNYSPTSP+YSPTSP+YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1694 PLSPNYSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1753
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1754 NYSPTSPHYSPTSPN-YSP 1771
Score = 107 bits (267), Expect = 5e-22
Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1728 SPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTS 1787
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSPSS Y+P
Sbjct: 1788 PHYSPTSPNYSPSS-PHYSP 1806
Score = 107 bits (266), Expect = 7e-22
Identities = 53/82 (64%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSPNYSPTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP ++P S
Sbjct: 1756 SPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPSSPHYSPTSPSYNPAS 1815
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSPS P Y+P+S + Y+P +
Sbjct: 1816 PNYSPSSPHYNPASPN-YSPSS 1836
Score = 105 bits (262), Expect = 2e-21
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1714 SPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTS 1773
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S Y+P
Sbjct: 1774 PHYSPTSPNYSPTS-PHYSP 1792
Score = 95.5 bits (236), Expect = 2e-18
Identities = 48/78 (61%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Frame = -2
Query: 533 SSPY-SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 360
SSP+ SPTSP P SP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1681 SSPFMSPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPH 1740
Query: 359 YSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1741 YSPTSPHYSPTSPN-YSP 1757
Score = 89.4 bits (220), Expect = 2e-16
Identities = 45/85 (52%), Positives = 58/85 (68%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
+P+SP YSP+SP+Y+P SP+YSP+SP Y+P+ P YSPSSP + SP+YSPSSP + S
Sbjct: 1812 NPASPNYSPSSPHYNPASPNYSPSSPQYNPALPNYSPSSPQYNPTSPNYSPSSPNYVLSN 1871
Query: 362 G------YSPSQPGYSPSSTSQYTP 306
G YSPS P Y S + Y P
Sbjct: 1872 GNIDSPQYSPSSPHYD-QSVAAYHP 1895
Score = 82.0 bits (201), Expect = 2e-14
Identities = 45/83 (54%), Positives = 54/83 (65%), Gaps = 7/83 (8%)
Frame = -2
Query: 533 SSPYSPTSPNYS------PTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 372
+S YSPTSP YS +SP SPTSP P SP YSP+SP S SP+YSP+SP +S
Sbjct: 1662 TSAYSPTSPVYSGDKDGDSSSPFMSPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYS 1721
Query: 371 P-STGYSPSQPGYSPSSTSQYTP 306
P S YSP+ P YSP+S Y+P
Sbjct: 1722 PTSPHYSPTSPHYSPTS-PHYSP 1743
Score = 75.1 bits (183), Expect = 3e-12
Identities = 41/85 (48%), Positives = 52/85 (61%), Gaps = 13/85 (15%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTY------------SPSSPYNSGVSPD 399
SPSSP Y+P PNYSP+SP Y+PTSP+YSPSSP Y SPSSP+
Sbjct: 1833 SPSSPQYNPALPNYSPSSPQYNPTSPNYSPSSPNYVLSNGNIDSPQYSPSSPHYDQSVAA 1892
Query: 398 YSPSSPQFSPSTGYSPSQPGYSPSS 324
Y P+SP ++ ST + + YSP+S
Sbjct: 1893 YHPTSPSYT-STNMAAEEAEYSPTS 1916
[111][TOP]
>UniRef100_A8Q5I6 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
RepID=A8Q5I6_MALGO
Length = 1607
Score = 111 bits (278), Expect = 3e-23
Identities = 56/83 (67%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1501 SPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS 1560
Query: 365 TGYSPSQPGYSPSSTSQYTPQTN 297
YSP+ P YSP+S QY+P N
Sbjct: 1561 PQYSPTSPQYSPTS-PQYSPSGN 1582
Score = 110 bits (274), Expect = 8e-23
Identities = 55/80 (68%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1480 SPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS 1539
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1540 PQYSPTSPQYSPTS-PQYSP 1558
Score = 105 bits (263), Expect = 2e-21
Identities = 51/74 (68%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 348
YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SP S YSP+
Sbjct: 1479 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1538
Query: 347 QPGYSPSSTSQYTP 306
P YSP+S QY+P
Sbjct: 1539 SPQYSPTS-PQYSP 1551
Score = 100 bits (250), Expect = 5e-20
Identities = 55/93 (59%), Positives = 63/93 (67%), Gaps = 15/93 (16%)
Frame = -2
Query: 539 SPSSP-YSPTSP-------------NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP 402
SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP
Sbjct: 1453 SPTSPQYSPTSPAGPRGRRLGASGPKYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1512
Query: 401 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1513 QYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1544
Score = 95.9 bits (237), Expect = 2e-18
Identities = 48/73 (65%), Positives = 54/73 (73%), Gaps = 3/73 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SPS
Sbjct: 1522 SPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPSG 1581
Query: 365 -TGYSPSQPGYSP 330
G S + SP
Sbjct: 1582 NVGASAASGAASP 1594
Score = 83.2 bits (204), Expect = 1e-14
Identities = 50/108 (46%), Positives = 62/108 (57%), Gaps = 30/108 (27%)
Frame = -2
Query: 539 SPSSPY---SPTSPNYSPTSPSYSPTSP-------------SYSPSSPTYSPSSPYNSGV 408
SP+SP TSP+YSPTSPSYSP+SP SP+SP YSP+SP S
Sbjct: 1389 SPTSPRIFAGATSPSYSPTSPSYSPSSPVIDASNARSTYTSRMSPASPNYSPTSPVYSPT 1448
Query: 407 SPDYSPSSPQFSPST--------------GYSPSQPGYSPSSTSQYTP 306
SP YSP+SPQ+SP++ YSP+ P YSP+S QY+P
Sbjct: 1449 SPAYSPTSPQYSPTSPAGPRGRRLGASGPKYSPTSPQYSPTS-PQYSP 1495
Score = 80.5 bits (197), Expect = 7e-14
Identities = 48/103 (46%), Positives = 59/103 (57%), Gaps = 27/103 (26%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSP-------------SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYS 393
S YSPTSP+YSP+SP SP SP+YSP+SP YSP+SP S SP YS
Sbjct: 1401 SPSYSPTSPSYSPSSPVIDASNARSTYTSRMSPASPNYSPTSPVYSPTSPAYSPTSPQYS 1460
Query: 392 PSS-------------PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P+S P++SP S YSP+ P YSP+S QY+P
Sbjct: 1461 PTSPAGPRGRRLGASGPKYSPTSPQYSPTSPQYSPTS-PQYSP 1502
Score = 72.8 bits (177), Expect = 1e-11
Identities = 46/119 (38%), Positives = 57/119 (47%), Gaps = 47/119 (39%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYS---------------------------------PTSPSY 459
SP ++PTSP Y PTSP+Y+ TSPSY
Sbjct: 1345 SPGYGFAPTSPGYVPTSPAYNATSPALGAMSPWVGAAGATSPAYSPTSPRIFAGATSPSY 1404
Query: 458 SPSSPTYSPSSPY-------------NSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 324
SP+SP+YSPSSP S SP+YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1405 SPTSPSYSPSSPVIDASNARSTYTSRMSPASPNYSPTSPVYSPTSPAYSPTSPQYSPTS 1463
[112][TOP]
>UniRef100_Q9AXN0 DNA-directed RNA polymerase n=1 Tax=Glaucosphaera vacuolata
RepID=Q9AXN0_9RHOD
Length = 1746
Score = 111 bits (277), Expect = 4e-23
Identities = 57/92 (61%), Positives = 68/92 (73%), Gaps = 12/92 (13%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SPTYSP+SP S SP YSP+SP +SPS+
Sbjct: 1607 SPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYSPTSPTYSPTSPTYSPTSPMYSPSS 1666
Query: 362 -----------GYSPSQPGYSPSSTSQYTPQT 300
YSPS P YSPSS QY+P +
Sbjct: 1667 PAMSPARAGGVSYSPSSPHYSPSS-PQYSPSS 1697
Score = 108 bits (269), Expect = 3e-22
Identities = 61/92 (66%), Positives = 69/92 (75%), Gaps = 12/92 (13%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS-----GV-----SPDYS 393
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSPSSP S GV SP YS
Sbjct: 1628 SPTSPAYSPTSPTYSPTSPTYSPTSPTYSPTSPMYSPSSPAMSPARAGGVSYSPSSPHYS 1687
Query: 392 PSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 300
PSSPQ+SPS+ YSPS P YSPSS QY+P +
Sbjct: 1688 PSSPQYSPSSPHYSPSSPHYSPSS-PQYSPSS 1718
Score = 107 bits (266), Expect = 7e-22
Identities = 55/81 (67%), Positives = 60/81 (74%), Gaps = 9/81 (11%)
Frame = -2
Query: 539 SPSSP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SPSSP YSPTSP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+S
Sbjct: 1586 SPSSPGGVAASPGYSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYSPTS 1645
Query: 383 PQFSP-STGYSPSQPGYSPSS 324
P +SP S YSP+ P YSPSS
Sbjct: 1646 PTYSPTSPTYSPTSPMYSPSS 1666
Score = 103 bits (257), Expect = 8e-21
Identities = 58/92 (63%), Positives = 65/92 (70%), Gaps = 12/92 (13%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSP----------SYSPSSPTYSPSSPYNSGVSPDYS 393
SP+SP YSPTSP YSPTSP YSP+SP SYSPSSP YSPSSP S SP YS
Sbjct: 1642 SPTSPTYSPTSPTYSPTSPMYSPSSPAMSPARAGGVSYSPSSPHYSPSSPQYSPSSPHYS 1701
Query: 392 PSSPQFSPST-GYSPSQPGYSPSSTSQYTPQT 300
PSSP +SPS+ YSPS P YSPSS + Y+P +
Sbjct: 1702 PSSPHYSPSSPQYSPSSPQYSPSSPA-YSPSS 1732
Score = 97.1 bits (240), Expect = 7e-19
Identities = 52/84 (61%), Positives = 58/84 (69%), Gaps = 12/84 (14%)
Frame = -2
Query: 539 SPSSP-----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYS 393
SPSSP YSP+SP+YSP+SP YSP+SP YSPSSP YSPS SP YS
Sbjct: 1663 SPSSPAMSPARAGGVSYSPSSPHYSPSSPQYSPSSPHYSPSSPHYSPS-------SPQYS 1715
Query: 392 PSSPQFSPST-GYSPSQPGYSPSS 324
PSSPQ+SPS+ YSPS P YSPSS
Sbjct: 1716 PSSPQYSPSSPAYSPSSPAYSPSS 1739
Score = 93.2 bits (230), Expect = 1e-17
Identities = 46/65 (70%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SPSSP YSP+SP YSP+SP YSP+SP YSPSSP YSPSSP S SP YSPSSP +SPS+
Sbjct: 1680 SPSSPHYSPSSPQYSPSSPHYSPSSPHYSPSSPQYSPSSPQYSPSSPAYSPSSPAYSPSS 1739
Query: 362 GYSPS 348
PS
Sbjct: 1740 PAHPS 1744
Score = 90.1 bits (222), Expect = 9e-17
Identities = 45/76 (59%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYS 354
SP SP+SP SP YSPTSP+YSP+SP+YSP+SP S SP YSP+SP +SP S YS
Sbjct: 1583 SPRSPSSPGGVAASPGYSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYS 1642
Query: 353 PSQPGYSPSSTSQYTP 306
P+ P YSP+S + Y+P
Sbjct: 1643 PTSPTYSPTSPT-YSP 1657
Score = 58.9 bits (141), Expect = 2e-07
Identities = 43/116 (37%), Positives = 55/116 (47%), Gaps = 38/116 (32%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSP--TSP------SYSPTSPSY------------------------- 459
+PS PY+P +SP SP S +PTSP+Y
Sbjct: 1522 TPSYPYTPIGGQFSPFAASPYGDAAFSPTPTSPAYASPYGTAASPFNAMASPYSRAGNAF 1581
Query: 458 ----SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
SPSSP +SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1582 YSPRSPSSPGGVAASPGYSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPA-YSP 1636
[113][TOP]
>UniRef100_A4S3M0 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S3M0_OSTLU
Length = 1646
Score = 110 bits (275), Expect = 6e-23
Identities = 54/87 (62%), Positives = 69/87 (79%), Gaps = 2/87 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1559 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1618
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDKDE 285
YSP+ P YSP+S + Y+P+ +++E
Sbjct: 1619 PAYSPTSPAYSPTSPA-YSPKEEEENE 1644
Score = 107 bits (266), Expect = 7e-22
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1524 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1583
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1584 PAYSPTSPAYSPTSPA-YSP 1602
Score = 107 bits (266), Expect = 7e-22
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1545 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1604
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1605 PAYSPTSPAYSPTSPA-YSP 1623
Score = 102 bits (255), Expect = 1e-20
Identities = 49/74 (66%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 348
YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S YSP+
Sbjct: 1523 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1582
Query: 347 QPGYSPSSTSQYTP 306
P YSP+S + Y+P
Sbjct: 1583 SPAYSPTSPA-YSP 1595
[114][TOP]
>UniRef100_Q7Q3C6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7Q3C6_ANOGA
Length = 1878
Score = 110 bits (275), Expect = 6e-23
Identities = 55/80 (68%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP +SPTSP+YSP+SPSYSPTSPSYSP+SP+YSP+SP + V+P YSPSSP +SP S
Sbjct: 1666 SPSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSPNYSPTS 1725
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSPSS +Y+P
Sbjct: 1726 PHYSPASPSYSPSS-PKYSP 1744
Score = 108 bits (270), Expect = 2e-22
Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSP+SP +SPTSPSYSPSSP+YSP+SP S SP YSP+SP F+P T
Sbjct: 1652 SPTSPSYSPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPVT 1711
Query: 362 -GYSPSQPGYSPSSTSQYTP 306
YSPS P YSP+S Y+P
Sbjct: 1712 PSYSPSSPNYSPTS-PHYSP 1730
Score = 103 bits (257), Expect = 8e-21
Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP+++P +PSYSPSSP YSP+SP+ S SP YSPSSP++SP S
Sbjct: 1687 SPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPSYSPSSPKYSPTS 1746
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y S YTP
Sbjct: 1747 PSYSPTSPSYIGS--PHYTP 1764
Score = 102 bits (255), Expect = 1e-20
Identities = 50/82 (60%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSP+SP +SPTSPSYSP+SPSYSP+SP+YSP+SP S SP+++P +P +SPS+
Sbjct: 1659 SPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSS 1718
Query: 362 -GYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSP+S S Y+P +
Sbjct: 1719 PNYSPTSPHYSPASPS-YSPSS 1739
Score = 99.0 bits (245), Expect = 2e-19
Identities = 51/87 (58%), Positives = 60/87 (68%), Gaps = 7/87 (8%)
Frame = -2
Query: 539 SPSSPYSPTS------PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SP SP PTS P YSPTSPSYSPTSPSYSPSSP +SP+SP S SP YSP+SP
Sbjct: 1633 SPMSPMHPTSASNFASPGYSPTSPSYSPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSPS 1692
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTPQT 300
+SP S YSP+ P ++P T Y+P +
Sbjct: 1693 YSPTSPSYSPTSPNFTP-VTPSYSPSS 1718
Score = 96.3 bits (238), Expect = 1e-18
Identities = 51/100 (51%), Positives = 64/100 (64%), Gaps = 22/100 (22%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
SP+SP YSPTSPN++P +PSYSP+SP+YSP+SP YSP+SP S SP YSP+SP +SP
Sbjct: 1694 SPTSPSYSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPSYSPSSPKYSPTSPSYSPTS 1753
Query: 368 -------------------STGYSPSQPGYSPSSTSQYTP 306
S YSP+ P YSPSS Q++P
Sbjct: 1754 PSYIGSPHYTPASPQYGQASPNYSPTSPSYSPSS-PQHSP 1792
Score = 89.7 bits (221), Expect = 1e-16
Identities = 50/99 (50%), Positives = 60/99 (60%), Gaps = 19/99 (19%)
Frame = -2
Query: 539 SPSSP-YSPTSP-----NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SPSSP Y+P SP +YSPTSP YSP SP YSP S YSPSSP + +YSP+SP
Sbjct: 1572 SPSSPNYAPNSPGGASPSYSPTSPGYSPPSPQYSPGSSNYSPSSPNIHSATQNYSPTSPS 1631
Query: 377 FSP-------------STGYSPSQPGYSPSSTSQYTPQT 300
+SP S GYSP+ P YSP+S S Y+P +
Sbjct: 1632 YSPMSPMHPTSASNFASPGYSPTSPSYSPTSPS-YSPSS 1669
Score = 83.2 bits (204), Expect = 1e-14
Identities = 58/150 (38%), Positives = 71/150 (47%), Gaps = 61/150 (40%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSY--------------------SPSSPTYSPSSP 423
SP+SP YSP+SP YSPTSPSYSPTSPSY SP+SP+YSPSSP
Sbjct: 1729 SPASPSYSPSSPKYSPTSPSYSPTSPSYIGSPHYTPASPQYGQASPNYSPTSPSYSPSSP 1788
Query: 422 YNSGVS-----------------------PDYSPSSPQFSP---------------STGY 357
+S S YSPSSP++SP S Y
Sbjct: 1789 QHSPGSSSNHYSIGSSSYSQTPAPYSPNMSSYSPSSPKYSPTSPVYTSSSPTYSPSSPAY 1848
Query: 356 SPSQPGYSPSSTSQ--YTPQTNDKDERGKD 273
SP+ GYSPSS + Y+P + D+ +D
Sbjct: 1849 SPTPQGYSPSSPASPTYSPTSPSYDDSNED 1878
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/88 (52%), Positives = 56/88 (63%), Gaps = 7/88 (7%)
Frame = -2
Query: 539 SPSSPYSPT-SPNYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SP P SP+ SP+YSP+SP+Y+P SP SYSP+SP YSP SP S S +YSPSSP
Sbjct: 1558 SPYPPSSPSMSPSYSPSSPNYAPNSPGGASPSYSPTSPGYSPPSPQYSPGSSNYSPSSPN 1617
Query: 377 FSPST-GYSPSQPGYSPSSTSQYTPQTN 297
+T YSP+ P YSP S T +N
Sbjct: 1618 IHSATQNYSPTSPSYSPMSPMHPTSASN 1645
Score = 77.4 bits (189), Expect = 6e-13
Identities = 47/85 (55%), Positives = 53/85 (62%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS-PST 363
SPSSP SP Y P+SPS SP SYSPSSP Y+P+SP G SP YSP+SP +S PS
Sbjct: 1549 SPSSPGPSMSP-YPPSSPSMSP---SYSPSSPNYAPNSP--GGASPSYSPTSPGYSPPSP 1602
Query: 362 GYSPSQPGYSPSS------TSQYTP 306
YSP YSPSS T Y+P
Sbjct: 1603 QYSPGSSNYSPSSPNIHSATQNYSP 1627
Score = 65.1 bits (157), Expect = 3e-09
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 15/96 (15%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPS---------YSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
P+S +P P++SP++ S +SP S S P+ SP P + +SP YSPSS
Sbjct: 1516 PASGMTPGGPSFSPSAQSDASGMSPSSWSPIRGSPSSPGPSMSPYPPSSPSMSPSYSPSS 1575
Query: 383 PQFSP------STGYSPSQPGYSPSSTSQYTPQTND 294
P ++P S YSP+ PGYSP S QY+P +++
Sbjct: 1576 PNYAPNSPGGASPSYSPTSPGYSPPS-PQYSPGSSN 1610
[115][TOP]
>UniRef100_Q5CUJ2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cryptosporidium parvum
Iowa II RepID=Q5CUJ2_CRYPV
Length = 1902
Score = 110 bits (275), Expect = 6e-23
Identities = 51/81 (62%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSP YSPTSP YSPSSP YSP+SP S SP+Y+P+SP +SP++
Sbjct: 1767 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTS 1826
Query: 362 GYSPSQPGYSPSSTSQYTPQT 300
YSP+ P Y+P+S + Y+P +
Sbjct: 1827 HYSPTSPNYNPTSPN-YSPSS 1846
Score = 109 bits (272), Expect = 1e-22
Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1732 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1791
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS P YSP+S QY+P
Sbjct: 1792 PHYSPSSPHYSPTS-PQYSP 1810
Score = 107 bits (266), Expect = 7e-22
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SPS+
Sbjct: 1739 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSS 1798
Query: 362 -GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y P
Sbjct: 1799 PHYSPTSPQYSPTSPN-YNP 1817
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1718 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1777
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSP+S Y+P +
Sbjct: 1778 PHYSPTSPHYSPTS-PHYSPSS 1798
Score = 106 bits (264), Expect = 1e-21
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1683 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1742
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S Y+P
Sbjct: 1743 PHYSPTSPHYSPTS-PHYSP 1761
Score = 106 bits (264), Expect = 1e-21
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1690 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1749
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S Y+P
Sbjct: 1750 PHYSPTSPHYSPTS-PHYSP 1768
Score = 106 bits (264), Expect = 1e-21
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1697 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1756
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S Y+P
Sbjct: 1757 PHYSPTSPHYSPTS-PHYSP 1775
Score = 106 bits (264), Expect = 1e-21
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1704 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1763
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S Y+P
Sbjct: 1764 PHYSPTSPHYSPTS-PHYSP 1782
Score = 106 bits (264), Expect = 1e-21
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1711 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1770
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S Y+P
Sbjct: 1771 PHYSPTSPHYSPTS-PHYSP 1789
Score = 99.8 bits (247), Expect = 1e-19
Identities = 49/77 (63%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S SPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S Y
Sbjct: 1679 SPDLSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHY 1738
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S Y+P
Sbjct: 1739 SPTSPHYSPTS-PHYSP 1754
Score = 98.2 bits (243), Expect = 3e-19
Identities = 54/87 (62%), Positives = 64/87 (73%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTSP+YSPTSP YSPTSP YS P+SP YSP+SP+ S SP YSP+S
Sbjct: 1746 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTS 1805
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
PQ+SP S Y+P+ P YSP TS Y+P
Sbjct: 1806 PQYSPTSPNYNPASPNYSP--TSHYSP 1830
Score = 95.5 bits (236), Expect = 2e-18
Identities = 50/89 (56%), Positives = 63/89 (70%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP------YNSGVSPDYSPSSP 381
SP+SP YSPTSP+YSP+SP YSPTSP YSP+SP Y+P+SP + S SP+Y+P+SP
Sbjct: 1781 SPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSP 1840
Query: 380 QFSPST----GYSPSQPGYSPSSTSQYTP 306
+SPS+ + PGYSPSS QY P
Sbjct: 1841 NYSPSSPNYISNNSGSPGYSPSS-PQYDP 1868
Score = 93.6 bits (231), Expect = 8e-18
Identities = 50/85 (58%), Positives = 59/85 (69%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPY------SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SPSSP S SP+ SPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP
Sbjct: 1664 SPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPH 1723
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTP 306
+SP S YSP+ P YSP+S Y+P
Sbjct: 1724 YSPTSPHYSPTSPHYSPTS-PHYSP 1747
Score = 78.6 bits (192), Expect = 3e-13
Identities = 48/97 (49%), Positives = 59/97 (60%), Gaps = 17/97 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNY-------------SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP 402
SP+SP YSPTSPNY SPTSP+Y+PTSP+YSPSSP Y + NSG SP
Sbjct: 1802 SPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSPNYSPSSPNYISN---NSG-SP 1857
Query: 401 DYSPSSPQFSP-STGYSPSQPGYSPSS--TSQYTPQT 300
YSPSSPQ+ P + P P YS ++Y+P +
Sbjct: 1858 GYSPSSPQYDPIAVASVPRSPSYSVGKMVDAEYSPSS 1894
Score = 74.3 bits (181), Expect = 5e-12
Identities = 51/117 (43%), Positives = 60/117 (51%), Gaps = 39/117 (33%)
Frame = -2
Query: 539 SPSSPYSPTSPN-------YSPTSPS-----YSPTSPSYSPSSPT--------------- 441
+P SP SP SP YSP SPS Y+PTSP Y+ SSPT
Sbjct: 1597 TPRSPMSPVSPGGIFSPVPYSPMSPSSPLMDYTPTSPIYAASSPTYNTEVSERARKKYKV 1656
Query: 440 ------YSPSSPYN-----SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
YSPSSP N S +SPD SP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1657 NNTLSSYSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1712
Score = 67.4 bits (163), Expect = 6e-10
Identities = 38/73 (52%), Positives = 46/73 (63%), Gaps = 20/73 (27%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSY---SPSSPTYSPSSP---------------YNS 414
SP+S YSPTSPNY+PTSP+YSP+SP+Y + SP YSPSSP Y+
Sbjct: 1823 SPTSHYSPTSPNYNPTSPNYSPSSPNYISNNSGSPGYSPSSPQYDPIAVASVPRSPSYSV 1882
Query: 413 G--VSPDYSPSSP 381
G V +YSPSSP
Sbjct: 1883 GKMVDAEYSPSSP 1895
[116][TOP]
>UniRef100_Q5CH45 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium hominis
RepID=Q5CH45_CRYHO
Length = 1895
Score = 110 bits (275), Expect = 6e-23
Identities = 51/81 (62%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSP YSPTSP YSPSSP YSP+SP S SP+Y+P+SP +SP++
Sbjct: 1760 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTS 1819
Query: 362 GYSPSQPGYSPSSTSQYTPQT 300
YSP+ P Y+P+S + Y+P +
Sbjct: 1820 HYSPTSPNYNPTSPN-YSPSS 1839
Score = 109 bits (272), Expect = 1e-22
Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1725 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1784
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS P YSP+S QY+P
Sbjct: 1785 PHYSPSSPHYSPTS-PQYSP 1803
Score = 107 bits (266), Expect = 7e-22
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SPS+
Sbjct: 1732 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSS 1791
Query: 362 -GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y P
Sbjct: 1792 PHYSPTSPQYSPTSPN-YNP 1810
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1711 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1770
Query: 365 TGYSPSQPGYSPSSTSQYTPQT 300
YSP+ P YSP+S Y+P +
Sbjct: 1771 PHYSPTSPHYSPTS-PHYSPSS 1791
Score = 106 bits (264), Expect = 1e-21
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1676 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1735
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S Y+P
Sbjct: 1736 PHYSPTSPHYSPTS-PHYSP 1754
Score = 106 bits (264), Expect = 1e-21
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1683 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1742
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S Y+P
Sbjct: 1743 PHYSPTSPHYSPTS-PHYSP 1761
Score = 106 bits (264), Expect = 1e-21
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1690 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1749
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S Y+P
Sbjct: 1750 PHYSPTSPHYSPTS-PHYSP 1768
Score = 106 bits (264), Expect = 1e-21
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1697 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1756
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S Y+P
Sbjct: 1757 PHYSPTSPHYSPTS-PHYSP 1775
Score = 106 bits (264), Expect = 1e-21
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S
Sbjct: 1704 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1763
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S Y+P
Sbjct: 1764 PHYSPTSPHYSPTS-PHYSP 1782
Score = 99.8 bits (247), Expect = 1e-19
Identities = 49/77 (63%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S SPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP +SP S Y
Sbjct: 1672 SPDLSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHY 1731
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S Y+P
Sbjct: 1732 SPTSPHYSPTS-PHYSP 1747
Score = 98.2 bits (243), Expect = 3e-19
Identities = 54/87 (62%), Positives = 64/87 (73%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTSP+YSPTSP YSPTSP YS P+SP YSP+SP+ S SP YSP+S
Sbjct: 1739 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTS 1798
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
PQ+SP S Y+P+ P YSP TS Y+P
Sbjct: 1799 PQYSPTSPNYNPASPNYSP--TSHYSP 1823
Score = 95.5 bits (236), Expect = 2e-18
Identities = 50/89 (56%), Positives = 63/89 (70%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP------YNSGVSPDYSPSSP 381
SP+SP YSPTSP+YSP+SP YSPTSP YSP+SP Y+P+SP + S SP+Y+P+SP
Sbjct: 1774 SPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSP 1833
Query: 380 QFSPST----GYSPSQPGYSPSSTSQYTP 306
+SPS+ + PGYSPSS QY P
Sbjct: 1834 NYSPSSPNYISNNSGSPGYSPSS-PQYDP 1861
Score = 93.6 bits (231), Expect = 8e-18
Identities = 50/85 (58%), Positives = 59/85 (69%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPY------SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SPSSP S SP+ SPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP+SP
Sbjct: 1657 SPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPH 1716
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTP 306
+SP S YSP+ P YSP+S Y+P
Sbjct: 1717 YSPTSPHYSPTSPHYSPTS-PHYSP 1740
Score = 78.6 bits (192), Expect = 3e-13
Identities = 49/97 (50%), Positives = 59/97 (60%), Gaps = 17/97 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNY-------------SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP 402
SP+SP YSPTSPNY SPTSP+Y+PTSP+YSPSSP Y + NSG SP
Sbjct: 1795 SPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSPNYSPSSPNYISN---NSG-SP 1850
Query: 401 DYSPSSPQFSPSTGYS-PSQPGYSPSS--TSQYTPQT 300
YSPSSPQ+ P S P P YS ++Y+P +
Sbjct: 1851 GYSPSSPQYDPIAVTSVPRSPSYSVGKMVDAEYSPSS 1887
Score = 74.3 bits (181), Expect = 5e-12
Identities = 51/117 (43%), Positives = 60/117 (51%), Gaps = 39/117 (33%)
Frame = -2
Query: 539 SPSSPYSPTSPN-------YSPTSPS-----YSPTSPSYSPSSPT--------------- 441
+P SP SP SP YSP SPS Y+PTSP Y+ SSPT
Sbjct: 1590 TPRSPMSPVSPGGIFSPVPYSPMSPSSPLMDYTPTSPIYAASSPTYNTEVSERARKKYKV 1649
Query: 440 ------YSPSSPYN-----SGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
YSPSSP N S +SPD SP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1650 NNTLSSYSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1705
Score = 67.4 bits (163), Expect = 6e-10
Identities = 38/73 (52%), Positives = 46/73 (63%), Gaps = 20/73 (27%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSY---SPSSPTYSPSSP---------------YNS 414
SP+S YSPTSPNY+PTSP+YSP+SP+Y + SP YSPSSP Y+
Sbjct: 1816 SPTSHYSPTSPNYNPTSPNYSPSSPNYISNNSGSPGYSPSSPQYDPIAVTSVPRSPSYSV 1875
Query: 413 G--VSPDYSPSSP 381
G V +YSPSSP
Sbjct: 1876 GKMVDAEYSPSSP 1888
[117][TOP]
>UniRef100_B7G9I2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G9I2_PHATR
Length = 1706
Score = 109 bits (273), Expect = 1e-22
Identities = 57/89 (64%), Positives = 68/89 (76%), Gaps = 4/89 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1616 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1675
Query: 365 TGYSPSQPGYSPSSTSQYTPQTND--KDE 285
YSP+ P YSP+S + Y+P D KDE
Sbjct: 1676 PAYSPTSPAYSPTSPA-YSPSGGDDKKDE 1703
Score = 107 bits (266), Expect = 7e-22
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1532 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1591
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1592 PAYSPTSPAYSPTSPA-YSP 1610
Score = 107 bits (266), Expect = 7e-22
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1553 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1612
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1613 PAYSPTSPAYSPTSPA-YSP 1631
Score = 107 bits (266), Expect = 7e-22
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1574 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1633
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1634 PAYSPTSPAYSPTSPA-YSP 1652
Score = 107 bits (266), Expect = 7e-22
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1595 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1654
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1655 PAYSPTSPAYSPTSPA-YSP 1673
Score = 105 bits (263), Expect = 2e-21
Identities = 52/84 (61%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1623 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1682
Query: 365 TGYSPSQPGYSPSSTSQYTPQTND 294
YSP+ P YSPS + D
Sbjct: 1683 PAYSPTSPAYSPSGGDDKKDEMED 1706
Score = 104 bits (259), Expect = 5e-21
Identities = 50/77 (64%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1514 SPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1573
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S + Y+P
Sbjct: 1574 SPTSPAYSPTSPA-YSP 1589
Score = 82.0 bits (201), Expect = 2e-14
Identities = 46/96 (47%), Positives = 57/96 (59%), Gaps = 18/96 (18%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSP-----------------TSPSYSPTSPSYSPSSPTYSPSSPYNSG 411
SP+ + SP YSP SP+YSPTSP YSP+SP YSP+SP S
Sbjct: 1481 SPAVGAASFSPAYSPDSGSYGSGFASGSYGAGDSPAYSPTSPQYSPTSPAYSPTSPAYSP 1540
Query: 410 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1541 TSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1575
Score = 60.8 bits (146), Expect = 6e-08
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP---SSPYNSGVSPDYSPSSPQFSP-S 366
+SP+ +SP + S SP+YSP S +Y S Y +G SP YSP+SPQ+SP S
Sbjct: 1470 ASPFVDGGAAFSPAVGAAS-FSPAYSPDSGSYGSGFASGSYGAGDSPAYSPTSPQYSPTS 1528
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1529 PAYSPTSPAYSPTSPA-YSP 1547
[118][TOP]
>UniRef100_Q4QZ03 DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum tuberosum
RepID=Q4QZ03_SOLTU
Length = 361
Score = 109 bits (272), Expect = 1e-22
Identities = 56/80 (70%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S SP YSP+SP +SP S
Sbjct: 131 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 190
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ YSP+S S Y+P
Sbjct: 191 PSYSPTSSSYSPTSPS-YSP 209
Score = 107 bits (267), Expect = 5e-22
Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSP+SP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 124 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 183
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S+S Y+P
Sbjct: 184 PSYSPTSPSYSPTSSS-YSP 202
Score = 107 bits (267), Expect = 5e-22
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP YSPTSP+YSPT PSYSP+ P+YSP+SP S SP YSP+SP +SP+
Sbjct: 215 SPTSPAYSPTSPAYSPTSPAYSPTLPSYSPTLPSYSPTSPSYSPTSPSYSPTSPSYSPTF 274
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ PGYSP+S S Y+P
Sbjct: 275 PAYSPTSPGYSPTSPS-YSP 293
Score = 106 bits (264), Expect = 1e-21
Identities = 55/80 (68%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSPTSP YSPTSPSYSPTSPSYSP+S +YSP+SP S SP YSP+SP +SP S
Sbjct: 166 SPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPTSPAYSPTS 225
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+ S Y+P
Sbjct: 226 PAYSPTSPAYSPTLPS-YSP 244
Score = 106 bits (264), Expect = 1e-21
Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSYSPTS SYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 173 SPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPTSPAYSPTSPAYSPTS 232
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+ S Y+P
Sbjct: 233 PAYSPTLPSYSPTLPS-YSP 251
Score = 104 bits (260), Expect = 3e-21
Identities = 52/80 (65%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+S S SP YSP+SP +SP S
Sbjct: 159 SPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPTS 218
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 219 PAYSPTSPAYSPTSPA-YSP 237
Score = 103 bits (258), Expect = 6e-21
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 6/86 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSPTSPSYSPT P+YSP+SP YSP+SP S SP YSP+SP ++PS
Sbjct: 250 SPTSPSYSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSA 309
Query: 362 GYSPSQPGYSPSS-----TSQYTPQT 300
YSPS YSP+S +S Y+P +
Sbjct: 310 RYSPSL-AYSPTSPKLSPSSPYSPSS 334
Score = 103 bits (257), Expect = 8e-21
Identities = 51/80 (63%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+ P YSPT P+YSPTSPSYSPTSPSYSP+SP+YSP+ P S SP YSP+SP +SP S
Sbjct: 236 SPTLPSYSPTLPSYSPTSPSYSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPTSPSYSPTS 295
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+PS ++Y+P
Sbjct: 296 PSYSPTSPSYNPS--ARYSP 313
Score = 103 bits (256), Expect = 1e-20
Identities = 50/80 (62%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP YSP+SP YSPTSP+YSP+SP+YSP+SP S S YSP+SP +SP++
Sbjct: 152 SPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTS 211
Query: 362 G-YSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 212 PIYSPTSPAYSPTSPA-YSP 230
Score = 103 bits (256), Expect = 1e-20
Identities = 50/77 (64%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
SS YSPTSP+YSPTSP YSPTSP+YSP+SP YSP+SP S P YSP+ P +SP S Y
Sbjct: 197 SSSYSPTSPSYSPTSPIYSPTSPAYSPTSPAYSPTSPAYSPTLPSYSPTLPSYSPTSPSY 256
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S S Y+P
Sbjct: 257 SPTSPSYSPTSPS-YSP 272
Score = 102 bits (254), Expect = 2e-20
Identities = 52/81 (64%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -2
Query: 533 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 360
SSP YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S SP YSPSSP +SP S
Sbjct: 119 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 178
Query: 359 YSPSQPGYSPSSTSQYTPQTN 297
YSP+ P YSP+S S Y+P ++
Sbjct: 179 YSPTSPSYSPTSPS-YSPTSS 198
Score = 99.8 bits (247), Expect = 1e-19
Identities = 52/86 (60%), Positives = 62/86 (72%), Gaps = 6/86 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN-----SGVSPDYSPSSPQ 378
SP+ P YSPTSP YSPTSPSYSPTSPSYSP+SP+Y+PS+ Y+ S SP SPSSP
Sbjct: 271 SPTFPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSARYSPSLAYSPTSPKLSPSSPY 330
Query: 377 FSPSTGYSPSQPGYSPSSTSQYTPQT 300
S YSP+ P YSP+S S Y+P +
Sbjct: 331 SPSSPSYSPTSPSYSPTSPS-YSPSS 355
Score = 99.4 bits (246), Expect = 1e-19
Identities = 55/105 (52%), Positives = 64/105 (60%), Gaps = 27/105 (25%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF---- 375
SP+ P YSPTSP+YSPTSPSYSPTSPSYSP+ P YSP+SP S SP YSP+SP +
Sbjct: 243 SPTLPSYSPTSPSYSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPTSPSYSPTSPSYSPTS 302
Query: 374 ----------------------SPSTGYSPSQPGYSPSSTSQYTP 306
SPS+ YSPS P YSP+S S Y+P
Sbjct: 303 PSYNPSARYSPSLAYSPTSPKLSPSSPYSPSSPSYSPTSPS-YSP 346
Score = 98.2 bits (243), Expect = 3e-19
Identities = 54/85 (63%), Positives = 60/85 (70%), Gaps = 14/85 (16%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPS------------SPTYSPSSPYNSGVSPD 399
SP+SP YSPTSP+YSPTSPSYSPTSPSY+PS SP SPSSPY+ SP
Sbjct: 278 SPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSARYSPSLAYSPTSPKLSPSSPYSPS-SPS 336
Query: 398 YSPSSPQFSP-STGYSPSQPGYSPS 327
YSP+SP +SP S YSPS P YSPS
Sbjct: 337 YSPTSPSYSPTSPSYSPSSPTYSPS 361
Score = 95.1 bits (235), Expect = 3e-18
Identities = 53/87 (60%), Positives = 63/87 (72%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSP-------TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTSP+YSP TSPSYSPTSP YSP+SP YSP+SP S SP YSP+
Sbjct: 180 SPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPTSPAYSPTSPAYSPTSPAYSPTL 239
Query: 383 PQFSPS-TGYSPSQPGYSPSSTSQYTP 306
P +SP+ YSP+ P YSP+S S Y+P
Sbjct: 240 PSYSPTLPSYSPTSPSYSPTSPS-YSP 265
Score = 84.7 bits (208), Expect = 4e-15
Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
Frame = -2
Query: 503 YSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSP 330
+SPTS P YSP+SP YSPSSP YSP+SP S SP YSP+SP +SP S YSPS PGYSP
Sbjct: 115 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 174
Query: 329 SSTSQYTP 306
+S + Y+P
Sbjct: 175 TSPA-YSP 181
Score = 59.7 bits (143), Expect = 1e-07
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Frame = -2
Query: 539 SPSSPYSP-TSPNYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGVSPD---YSPSSPQ 378
SP+ SP T +SP ++SPTS SP YSPSSP G SP YSP+SP
Sbjct: 93 SPNMRMSPITDAQFSPYVGGMAFSPTS------SPGYSPSSP---GYSPSSPGYSPTSPG 143
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTPQT 300
+SP S GYSP+ PGYSP+S + Y+P +
Sbjct: 144 YSPTSPGYSPTSPGYSPTSPT-YSPSS 169
[119][TOP]
>UniRef100_C1EA31 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1EA31_9CHLO
Length = 1720
Score = 109 bits (272), Expect = 1e-22
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1612 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPTS 1671
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1672 PQYSPTSPQYSPTS-PQYSP 1690
Score = 108 bits (270), Expect = 2e-22
Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1591 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1650
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S QY+P
Sbjct: 1651 PAYSPTSPAYSPTS-PQYSP 1669
Score = 107 bits (267), Expect = 5e-22
Identities = 52/74 (70%), Positives = 61/74 (82%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1619 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPTSPQYSPTS 1678
Query: 365 TGYSPSQPGYSPSS 324
YSP+ P YSP+S
Sbjct: 1679 PQYSPTSPQYSPTS 1692
Score = 107 bits (266), Expect = 7e-22
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1528 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1587
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1588 PAYSPTSPAYSPTSPA-YSP 1606
Score = 107 bits (266), Expect = 7e-22
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1549 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1608
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1609 PAYSPTSPAYSPTSPA-YSP 1627
Score = 107 bits (266), Expect = 7e-22
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1570 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1629
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1630 PAYSPTSPAYSPTSPA-YSP 1648
Score = 103 bits (256), Expect = 1e-20
Identities = 50/77 (64%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S Y
Sbjct: 1524 SPGYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1583
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S + Y+P
Sbjct: 1584 SPTSPAYSPTSPA-YSP 1599
Score = 102 bits (254), Expect = 2e-20
Identities = 53/89 (59%), Positives = 65/89 (73%), Gaps = 9/89 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SPQ+SP S
Sbjct: 1626 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPTSPQYSPTSPQYSPTS 1685
Query: 365 TGYSPSQPGYSPS-------STSQYTPQT 300
YSP+ G S + ++ QY+P T
Sbjct: 1686 PQYSPTSLGLSDADAPTRSPTSPQYSPST 1714
Score = 95.9 bits (237), Expect = 2e-18
Identities = 54/87 (62%), Positives = 64/87 (73%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTS-------PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTS P YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+S
Sbjct: 1598 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1657
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P +SP S YSP+ P YSP+S QY+P
Sbjct: 1658 PAYSPTSPQYSPTSPQYSPTS-PQYSP 1683
[120][TOP]
>UniRef100_A8IRZ2 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IRZ2_CHLRE
Length = 1789
Score = 107 bits (268), Expect = 4e-22
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1551 SPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1610
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1611 PAYSPTSPAYSPTSPA-YSP 1629
Score = 107 bits (266), Expect = 7e-22
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1572 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1631
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1632 PAYSPTSPAYSPTSPA-YSP 1650
Score = 105 bits (263), Expect = 2e-21
Identities = 53/83 (63%), Positives = 64/83 (77%), Gaps = 5/83 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1579 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1638
Query: 365 TGYSPSQPGYSPSS---TSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1639 PAYSPTSPAYSPTSPAYSPAYSP 1661
Score = 105 bits (261), Expect = 3e-21
Identities = 51/75 (68%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 1600 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPA- 1658
Query: 362 GYSPSQPGYSPSSTS 318
YSP+ P YSP+S S
Sbjct: 1659 -YSPTSPQYSPTSPS 1672
Score = 104 bits (260), Expect = 3e-21
Identities = 52/79 (65%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
P SP YSPTSP YSPTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1545 PMSPGYSPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1604
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1605 AYSPTSPAYSPTSPA-YSP 1622
Score = 100 bits (248), Expect = 9e-20
Identities = 52/85 (61%), Positives = 63/85 (74%), Gaps = 2/85 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+ S SP YSP+SP SP S
Sbjct: 1621 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPA---YSPTSPQYSPTSPSMSPTS 1677
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDK 291
YSP+ P YSP+S + Y+P T +
Sbjct: 1678 PRYSPTSPNYSPTSPN-YSPSTRQR 1701
Score = 81.3 bits (199), Expect = 4e-14
Identities = 46/83 (55%), Positives = 54/83 (65%), Gaps = 5/83 (6%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSP----TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 375
SP+SP YSPTSP YSP TSP YSPTSPS SP+SP YSP+SP S SP+YSPS+ Q
Sbjct: 1642 SPTSPAYSPTSPAYSPAYSPTSPQYSPTSPSMSPTSPRYSPTSPNYSPTSPNYSPSTRQR 1701
Query: 374 SPSTGYSPSQPGYSPSSTSQYTP 306
ST P+ G ++ Q P
Sbjct: 1702 RRSTRPRPTSLGRRRAARVQAAP 1724
Score = 72.0 bits (175), Expect = 3e-11
Identities = 46/123 (37%), Positives = 58/123 (47%), Gaps = 53/123 (43%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSP----TSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 375
SP+SP YSPTSP YSPTSP+YSP TSP YSP+SP+ SP+SP S SP+YSP+SP +
Sbjct: 1635 SPTSPAYSPTSPAYSPTSPAYSPAYSPTSPQYSPTSPSMSPTSPRYSPTSPNYSPTSPNY 1694
Query: 374 SPST------------------------------------------------GYSPSQPG 339
SPST + P++P
Sbjct: 1695 SPSTRQRRRSTRPRPTSLGRRRAARVQAAPTPAPPTAPPRMSAPSTHLAPPSAHPPTRPR 1754
Query: 338 YSP 330
+P
Sbjct: 1755 RAP 1757
[121][TOP]
>UniRef100_Q9C428 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monoblepharis
macrandra RepID=Q9C428_9FUNG
Length = 1603
Score = 107 bits (268), Expect = 4e-22
Identities = 51/72 (70%), Positives = 60/72 (83%), Gaps = 2/72 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSPSY+PTSPSYSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1532 SPTSPGYSPTSPSYSPTSPSYTPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1591
Query: 365 TGYSPSQPGYSP 330
YSP+ P YSP
Sbjct: 1592 PSYSPTSPSYSP 1603
Score = 92.4 bits (228), Expect = 2e-17
Identities = 48/76 (63%), Positives = 57/76 (75%), Gaps = 4/76 (5%)
Frame = -2
Query: 521 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQP 342
SPTSP YSPTSPSYSPTSPSY+P+SP+YSP+SP S SP YSP+SP +SP+ SPS
Sbjct: 1532 SPTSPGYSPTSPSYSPTSPSYTPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT---SPSYS 1588
Query: 341 ----GYSPSSTSQYTP 306
YSP+S S Y+P
Sbjct: 1589 PTSPSYSPTSPS-YSP 1603
[122][TOP]
>UniRef100_A9TK89 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TK89_PHYPA
Length = 1646
Score = 107 bits (267), Expect = 5e-22
Identities = 55/98 (56%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP+YSPTSP YSPTSP YSP+SP+YSP+SP + SP YSP+SP +SP S
Sbjct: 1557 SPTSPGYSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTS 1616
Query: 365 TGYSPSQPGYSPSSTSQYTPQTNDKDERGKD*WRRSMR 252
YSP+ P YSP+S + + K W R MR
Sbjct: 1617 PSYSPTSPSYSPTSPAY----------KHKPTWLRGMR 1644
Score = 106 bits (265), Expect = 9e-22
Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP SP YSPTSP YSPTSP YSPTSP YSP+SP+YSP+SP S SP YSP+SP +SP S
Sbjct: 1536 SPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPTS 1595
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S S Y+P
Sbjct: 1596 PSYAPTSPSYSPTSPS-YSP 1614
Score = 105 bits (261), Expect = 3e-21
Identities = 50/77 (64%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S P+SP+SP YSP+SP YSP SP YSP+SP YSP+SP S SP YSP+SP +SP S GY
Sbjct: 1518 SMPFSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGY 1577
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ PGYSP+S S Y+P
Sbjct: 1578 SPTSPGYSPTSPS-YSP 1593
Score = 105 bits (261), Expect = 3e-21
Identities = 53/80 (66%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSP SP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1529 SPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPTS 1588
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P Y+P+S S Y+P
Sbjct: 1589 PSYSPTSPSYAPTSPS-YSP 1607
Score = 78.2 bits (191), Expect = 3e-13
Identities = 46/82 (56%), Positives = 54/82 (65%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSPYSPTSP-NYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SPS SP S +SP S +SP+SP YSPSSP YSP SP S SP YSP+SP +SP
Sbjct: 1499 SPSLRASPLSEAQFSPYVGSMPFSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSP 1558
Query: 368 -STGYSPSQPGYSPSSTSQYTP 306
S GYSP+ P YSP+S Y+P
Sbjct: 1559 TSPGYSPTSPSYSPTSPG-YSP 1579
[123][TOP]
>UniRef100_O00820 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acanthamoeba
castellanii RepID=O00820_ACACA
Length = 1569
Score = 107 bits (267), Expect = 5e-22
Identities = 54/80 (67%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSP+SP YSP+SP YSP SP YSPSSP YSP+SP S SP YSP+SP +SP S
Sbjct: 1483 SPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSPASPSYSPTSPAYSPTS 1542
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSPS P YSP+S S Y+P
Sbjct: 1543 PSYSPSSPSYSPTSPS-YSP 1561
Score = 106 bits (264), Expect = 1e-21
Identities = 51/73 (69%), Positives = 58/73 (79%), Gaps = 2/73 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSP SP YSP+SP+YSPTSP YSP+SP+YSP+SP S SP YSPSSP +SP S
Sbjct: 1497 SPSSPGYSPASPGYSPSSPAYSPTSPKYSPASPSYSPTSPAYSPTSPSYSPSSPSYSPTS 1556
Query: 365 TGYSPSQPGYSPS 327
YSP+ P YSPS
Sbjct: 1557 PSYSPTSPSYSPS 1569
Score = 105 bits (262), Expect = 2e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SPSSP YSP+SP YSP SP YSP+SP+YSP+SP YSP+SP S SP YSP+SP +SPS+
Sbjct: 1490 SPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSPASPSYSPTSPAYSPTSPSYSPSS 1549
Query: 362 -GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 1550 PSYSPTSPSYSPTSPS-YSP 1568
Score = 103 bits (256), Expect = 1e-20
Identities = 53/87 (60%), Positives = 62/87 (71%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSP+SP YSP+SP YSP+SP YSP+SP YSPSSP S SP YSP+S
Sbjct: 1469 SPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSPAS 1528
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P +SP S YSP+ P YSPSS S Y+P
Sbjct: 1529 PSYSPTSPAYSPTSPSYSPSSPS-YSP 1554
Score = 100 bits (248), Expect = 9e-20
Identities = 52/80 (65%), Positives = 58/80 (72%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP YSP SP YSP YSP+SP YSPSSP YSPSSP S SP YSPSSP +SP S
Sbjct: 1462 SPSSPSYSPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTS 1521
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1522 PKYSPASPSYSPTSPA-YSP 1540
Score = 79.7 bits (195), Expect = 1e-13
Identities = 45/83 (54%), Positives = 58/83 (69%), Gaps = 5/83 (6%)
Frame = -2
Query: 539 SPSSPYSPTSP--NYSPTSPSYSPT--SPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 372
+P++ YSP +SP S+SP+ SPSYSP+SP YSP+ S SP YSPSSP +S
Sbjct: 1438 TPAASYSPYVDFGEFSPGRGSFSPSPSSPSYSPASPGYSPAGAGYSPSSPGYSPSSPGYS 1497
Query: 371 PST-GYSPSQPGYSPSSTSQYTP 306
PS+ GYSP+ PGYSPSS + Y+P
Sbjct: 1498 PSSPGYSPASPGYSPSSPA-YSP 1519
[124][TOP]
>UniRef100_O96452 DNA-directed RNA polymerase n=1 Tax=Antonospora locustae
RepID=O96452_ANTLO
Length = 1553
Score = 107 bits (267), Expect = 5e-22
Identities = 56/100 (56%), Positives = 67/100 (67%), Gaps = 15/100 (15%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1440 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1499
Query: 365 TGYSPSQPGYSPSSTSQ-------------YTPQTNDKDE 285
YSP+ P YSP+S + Y P T KD+
Sbjct: 1500 PAYSPTSPAYSPTSPAYSPTSPAYSPTSPVYRPSTRAKDQ 1539
Score = 103 bits (257), Expect = 8e-21
Identities = 50/76 (65%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYS 354
S YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S YS
Sbjct: 1437 SVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYS 1496
Query: 353 PSQPGYSPSSTSQYTP 306
P+ P YSP+S + Y+P
Sbjct: 1497 PTSPAYSPTSPA-YSP 1511
Score = 93.2 bits (230), Expect = 1e-17
Identities = 44/70 (62%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP + PST
Sbjct: 1475 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPVYRPST 1534
Query: 362 GYSPSQPGYS 333
G++
Sbjct: 1535 RAKDQDQGFN 1544
Score = 82.8 bits (203), Expect = 1e-14
Identities = 45/82 (54%), Positives = 59/82 (71%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSPYSPTSPN--YSPTSPS-YSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
S S P+SP + + + T+PS YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP
Sbjct: 1417 SSSVPFSPIAAHGYAAGTTPSVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1476
Query: 368 -STGYSPSQPGYSPSSTSQYTP 306
S YSP+ P YSP+S + Y+P
Sbjct: 1477 TSPAYSPTSPAYSPTSPA-YSP 1497
Score = 82.4 bits (202), Expect = 2e-14
Identities = 45/91 (49%), Positives = 56/91 (61%), Gaps = 18/91 (19%)
Frame = -2
Query: 524 YSPTSPN-----------------YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDY 396
Y +S YSPTSP+YSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 1415 YGSSSVPFSPIAAHGYAAGTTPSVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1474
Query: 395 SPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
SP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1475 SPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1504
[125][TOP]
>UniRef100_Q58EF0 Polr2a protein (Fragment) n=2 Tax=Danio rerio RepID=Q58EF0_DANRE
Length = 161
Score = 107 bits (266), Expect = 7e-22
Identities = 55/99 (55%), Positives = 71/99 (71%), Gaps = 14/99 (14%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPTSP YSPT+P YSPTSP+YSP+SPTY+P+SP S SP YSP+SP++SP+
Sbjct: 61 SPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSPTS 120
Query: 365 ----------TGYSPSQPGYSPSSTSQYTP--QTNDKDE 285
+ YSP+ PGYSP+S + Y+P +D DE
Sbjct: 121 PTYSPTSPKGSTYSPTSPGYSPTSPT-YSPAISPDDSDE 158
Score = 106 bits (264), Expect = 1e-21
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 54 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTS 113
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 114 PKYSPTSPTYSPTSPKGSTYSP 135
Score = 105 bits (262), Expect = 2e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 40 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTS 99
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 100 PKYSPTSPTYSPTS-PKYSP 118
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 12 TPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTS 71
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 72 PTYSPTTPKYSPTSPT-YSP 90
Score = 102 bits (254), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 5 TPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS 64
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP +T +Y+P
Sbjct: 65 PKYSPTSPTYSP-TTPKYSP 83
Score = 99.4 bits (246), Expect = 1e-19
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 33 TPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS 92
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S + Y+P
Sbjct: 93 PTYTPTSPKYSPTSPT-YSP 111
Score = 97.1 bits (240), Expect = 7e-19
Identities = 45/76 (59%), Positives = 61/76 (80%), Gaps = 1/76 (1%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 348
Y+P SP Y+P+SPSYSP+SPSYSP+SP Y+P+SP S SP+Y+P+SP++SP S YSP+
Sbjct: 4 YTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 63
Query: 347 QPGYSPSSTSQYTPQT 300
P YSP+S + Y+P T
Sbjct: 64 SPKYSPTSPT-YSPTT 78
Score = 89.0 bits (219), Expect = 2e-16
Identities = 41/69 (59%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Frame = -2
Query: 509 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 333
P Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S YSP+ P YS
Sbjct: 2 PRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYS 61
Query: 332 PSSTSQYTP 306
P+S +Y+P
Sbjct: 62 PTS-PKYSP 69
[126][TOP]
>UniRef100_UPI00006A20E2 DNA-directed RNA polymerase II subunit RPB1 (EC 2.7.7.6) (RNA
polymerase II subunit B1) (DNA-directed RNA polymerase
II subunit A) (DNA-directed RNA polymerase III largest
subunit). n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI00006A20E2
Length = 162
Score = 106 bits (265), Expect = 9e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+SP +SP S
Sbjct: 53 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 112
Query: 365 TGYSPSQPGYSPSST--SQYTP 306
YSP+ P YSP+S S Y+P
Sbjct: 113 PKYSPTSPTYSPTSPKGSTYSP 134
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+PSSP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP+SP++SP S
Sbjct: 11 TPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTS 70
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 71 PTYSPTTPKYSPTSPT-YSP 89
Score = 105 bits (261), Expect = 3e-21
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S SP YSP+SP ++P S
Sbjct: 39 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 98
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S +Y+P
Sbjct: 99 PKYSPTSPTYSPTS-PKYSP 117
Score = 103 bits (258), Expect = 6e-21
Identities = 52/95 (54%), Positives = 68/95 (71%), Gaps = 11/95 (11%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 67 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 126
Query: 365 ---TGYSPSQPGYSPSS------TSQYTPQTNDKD 288
+ YSP+ PGYSP+S + +P +D+D
Sbjct: 127 PKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDED 161
Score = 102 bits (254), Expect = 2e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S
Sbjct: 4 TPQSPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS 63
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP +T +Y+P
Sbjct: 64 PKYSPTSPTYSP-TTPKYSP 82
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP+SP +SP S
Sbjct: 32 TPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS 91
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ P YSP+S + Y+P
Sbjct: 92 PVYTPTSPKYSPTSPT-YSP 110
Score = 97.4 bits (241), Expect = 6e-19
Identities = 45/76 (59%), Positives = 62/76 (81%), Gaps = 1/76 (1%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 348
Y+P SP+Y+P+SPSYSP+SPSYSP+SP Y+P+SP S SP+Y+P+SP++SP S YSP+
Sbjct: 3 YTPQSPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 62
Query: 347 QPGYSPSSTSQYTPQT 300
P YSP+S + Y+P T
Sbjct: 63 SPKYSPTSPT-YSPTT 77
Score = 90.1 bits (222), Expect = 9e-17
Identities = 42/69 (60%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Frame = -2
Query: 509 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYS 333
P Y+P SPSY+P+SPSYSPSSP+YSP+SP + SP YSPSSP+++P S YSP+ P YS
Sbjct: 1 PRYTPQSPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYS 60
Query: 332 PSSTSQYTP 306
P+S +Y+P
Sbjct: 61 PTS-PKYSP 68
[127][TOP]
>UniRef100_C1MI48 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MI48_9CHLO
Length = 1694
Score = 105 bits (263), Expect = 2e-21
Identities = 52/80 (65%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
+P+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1562 APTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1621
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1622 PAYSPTSPAYSPTSPA-YSP 1640
Score = 105 bits (261), Expect = 3e-21
Identities = 51/74 (68%), Positives = 60/74 (81%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1583 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1642
Query: 365 TGYSPSQPGYSPSS 324
YSP+ P YSP+S
Sbjct: 1643 PAYSPTSPQYSPTS 1656
Score = 102 bits (254), Expect = 2e-20
Identities = 52/96 (54%), Positives = 67/96 (69%), Gaps = 11/96 (11%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SPQ+SP++
Sbjct: 1597 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPTS 1656
Query: 362 ----------GYSPSQPGYSPSSTSQYTPQTNDKDE 285
SP+ P YSP+ + +T +K+E
Sbjct: 1657 VGLSDVENAPTRSPTSPQYSPTEGAFSPMETTEKEE 1692
Score = 100 bits (250), Expect = 5e-20
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS-----PSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SP+SP YSPTSP YSPTSP+YSPTSP+YS P+SP YSP+SP S SP YSP+SP
Sbjct: 1529 SPTSPGYSPTSPAYSPTSPAYSPTSPAYSPTSPAPTSPAYSPTSPAYSPTSPAYSPTSPA 1588
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTP 306
+SP S YSP+ P YSP+S + Y+P
Sbjct: 1589 YSPTSPAYSPTSPAYSPTSPA-YSP 1612
Score = 100 bits (250), Expect = 5e-20
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPS-----YSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SP+SP YSPTSP YSPTSP+YSPTSP+ YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1536 SPTSPAYSPTSPAYSPTSPAYSPTSPAPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA 1595
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTP 306
+SP S YSP+ P YSP+S + Y+P
Sbjct: 1596 YSPTSPAYSPTSPAYSPTSPA-YSP 1619
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/74 (63%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 348
+SPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP + SP YSP+SP +SP S YSP+
Sbjct: 1528 FSPTSPGYSPTSPAYSPTSPAYSPTSPAYSPTSP--APTSPAYSPTSPAYSPTSPAYSPT 1585
Query: 347 QPGYSPSSTSQYTP 306
P YSP+S + Y+P
Sbjct: 1586 SPAYSPTSPA-YSP 1598
Score = 89.7 bits (221), Expect = 1e-16
Identities = 53/92 (57%), Positives = 64/92 (69%), Gaps = 14/92 (15%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPS-----YSPTSPSYS-------PSSPTYSPSSPYNSGVSPD 399
SP+SP YSPTSP YSPTSP+ YSPTSP+YS P+SP YSP+SP S SP
Sbjct: 1543 SPTSPAYSPTSPAYSPTSPAPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA 1602
Query: 398 YSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1603 YSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1633
[128][TOP]
>UniRef100_B4R347 RNA polymerase II 215kD subunit n=1 Tax=Drosophila simulans
RepID=B4R347_DROSI
Length = 552
Score = 105 bits (262), Expect = 2e-21
Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
SP + YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P T
Sbjct: 331 SPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTP 390
Query: 362 GYSPSQPGYSPSSTSQYTPQTNDKDERG 279
YSP+ P YS S QY+P + + G
Sbjct: 391 SYSPTSPNYSAS--PQYSPASPAYSQTG 416
Score = 104 bits (259), Expect = 5e-21
Identities = 49/79 (62%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSP+SPSYSPTSP YSP+SP+YSP+SP + V+P YSP+SP +S S
Sbjct: 344 SPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASP 403
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YS + +Y+P
Sbjct: 404 QYSPASPAYSQTGV-KYSP 421
Score = 96.7 bits (239), Expect = 9e-19
Identities = 55/95 (57%), Positives = 66/95 (69%), Gaps = 17/95 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P S SP+YS +SPQ+SP+
Sbjct: 351 SPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPQYSPAS 409
Query: 365 -----TG--YSPSQPGYSPSSTS--------QYTP 306
TG YSP+ P YSP S S QYTP
Sbjct: 410 PAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 444
Score = 89.7 bits (221), Expect = 1e-16
Identities = 53/109 (48%), Positives = 66/109 (60%), Gaps = 31/109 (28%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSP 423
SP+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 372 SPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPSP 431
Query: 422 YNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 306
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 432 SYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 478
Score = 84.0 bits (206), Expect = 6e-15
Identities = 49/96 (51%), Positives = 59/96 (61%), Gaps = 20/96 (20%)
Frame = -2
Query: 533 SSPYSPTSPNYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSPYNSG 411
SS YSPTSP YSPT SPS YSP+S +YSP+SP+YSP+SP S
Sbjct: 300 SSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSP 359
Query: 410 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
SP YSP+SP +SP S YSP+ P Y+P T Y+P
Sbjct: 360 SSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 394
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/108 (42%), Positives = 58/108 (53%), Gaps = 28/108 (25%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN-------------SGVSPD 399
SPS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S SP
Sbjct: 430 SPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 489
Query: 398 YSPSSPQFSPST---------------GYSPSQPGYSPSSTSQYTPQT 300
YSP+ +SPS+ YSP+ P YSP++ S Y+P++
Sbjct: 490 YSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPKS 537
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/89 (55%), Positives = 60/89 (67%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP YSP SP+Y SP SP Y+P SP YSP+SP YSP+SP S SP +SPS+ Q+SP
Sbjct: 420 SPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSP 478
Query: 368 --------STGYSPSQPGYSPSSTSQYTP 306
S YSP+ YSPSST +Y+P
Sbjct: 479 TGSTYSATSPRYSPNMSIYSPSST-KYSP 506
Score = 78.2 bits (191), Expect = 3e-13
Identities = 50/97 (51%), Positives = 59/97 (60%), Gaps = 19/97 (19%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPT-----SPSYSPS-----SP--TYSPSSPYNSGVSPDYSP 390
S+ YSP+S YSPTSP YSPT SPS++ S SP YSPSS S SP YSP
Sbjct: 293 STGYSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSP 352
Query: 389 SSPQFSPST-GYSPSQPGYSPSSTS------QYTPQT 300
+SP +SPS+ YSP+ P YSP+S S YTP T
Sbjct: 353 TSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 389
Score = 76.6 bits (187), Expect = 1e-12
Identities = 49/98 (50%), Positives = 55/98 (56%), Gaps = 20/98 (20%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 369
SPSSP SP Y P SPS SPSYSP+SP Y+ SSP G SP+YSPSSP +SP
Sbjct: 222 SPSSPGPSMSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSP 275
Query: 368 -----------------STGYSPSQPGYSPSSTSQYTP 306
STGYSPS GYSP+S Y+P
Sbjct: 276 LYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPG-YSP 312
Score = 73.6 bits (179), Expect = 9e-12
Identities = 44/95 (46%), Positives = 57/95 (60%), Gaps = 23/95 (24%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPT-----------------SPSYS---PSSPTYSPSSP 423
SP+SP YSPTSP YSP+SP +SP+ SP+ S PSS YSP+SP
Sbjct: 450 SPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSP 509
Query: 422 YNSGVSPDYSPSSPQFSPS--TGYSPSQPGYSPSS 324
+ + +YSP+SP +SP+ + YSP P YSPSS
Sbjct: 510 TYTPTARNYSPTSPMYSPTAPSHYSPKSPAYSPSS 544
Score = 70.9 bits (172), Expect = 6e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 366
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 495 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPKSPAYSPSSPTFEES 550
Score = 66.2 bits (160), Expect = 1e-09
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 16/92 (17%)
Frame = -2
Query: 530 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 381
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 190 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSP 249
Query: 380 QFSPST------GYSPSQPGYSPSSTSQYTPQ 303
++ S+ YSPS P YSP+S +P+
Sbjct: 250 NYTASSPGGASPNYSPSSPNYSPTSPLYASPR 281
Score = 63.9 bits (154), Expect = 7e-09
Identities = 31/41 (75%), Positives = 35/41 (85%), Gaps = 2/41 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 423
SP+SP Y+PT+ NYSPTSP YSPT+PS YSP SP YSPSSP
Sbjct: 505 SPTSPTYTPTARNYSPTSPMYSPTAPSHYSPKSPAYSPSSP 545
[129][TOP]
>UniRef100_B4IK28 DNA-directed RNA polymerase n=1 Tax=Drosophila sechellia
RepID=B4IK28_DROSE
Length = 1887
Score = 105 bits (262), Expect = 2e-21
Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
SP + YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P T
Sbjct: 1666 SPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTP 1725
Query: 362 GYSPSQPGYSPSSTSQYTPQTNDKDERG 279
YSP+ P YS S QY+P + + G
Sbjct: 1726 SYSPTSPNYSAS--PQYSPASPAYSQTG 1751
Score = 104 bits (259), Expect = 5e-21
Identities = 49/79 (62%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSP+SPSYSPTSP YSP+SP+YSP+SP + V+P YSP+SP +S S
Sbjct: 1679 SPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASP 1738
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YS + +Y+P
Sbjct: 1739 QYSPASPAYSQTGV-KYSP 1756
Score = 96.7 bits (239), Expect = 9e-19
Identities = 55/95 (57%), Positives = 66/95 (69%), Gaps = 17/95 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P S SP+YS +SPQ+SP+
Sbjct: 1686 SPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPQYSPAS 1744
Query: 365 -----TG--YSPSQPGYSPSSTS--------QYTP 306
TG YSP+ P YSP S S QYTP
Sbjct: 1745 PAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1779
Score = 89.7 bits (221), Expect = 1e-16
Identities = 53/109 (48%), Positives = 66/109 (60%), Gaps = 31/109 (28%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSP 423
SP+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1707 SPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPSP 1766
Query: 422 YNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 306
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1767 SYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1813
Score = 87.0 bits (214), Expect = 8e-16
Identities = 48/100 (48%), Positives = 60/100 (60%), Gaps = 22/100 (22%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP------- 402
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1771 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1830
Query: 401 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 306
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1831 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1870
Score = 84.7 bits (208), Expect = 4e-15
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 366
SPS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+
Sbjct: 1806 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1865
Query: 365 TGYSPSQPGYSPSS 324
+ YSP+ P YSPSS
Sbjct: 1866 SHYSPTSPAYSPSS 1879
Score = 84.0 bits (206), Expect = 6e-15
Identities = 49/96 (51%), Positives = 59/96 (61%), Gaps = 20/96 (20%)
Frame = -2
Query: 533 SSPYSPTSPNYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSPYNSG 411
SS YSPTSP YSPT SPS YSP+S +YSP+SP+YSP+SP S
Sbjct: 1635 SSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSP 1694
Query: 410 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
SP YSP+SP +SP S YSP+ P Y+P T Y+P
Sbjct: 1695 SSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 1729
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/89 (55%), Positives = 60/89 (67%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP YSP SP+Y SP SP Y+P SP YSP+SP YSP+SP S SP +SPS+ Q+SP
Sbjct: 1755 SPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSP 1813
Query: 368 --------STGYSPSQPGYSPSSTSQYTP 306
S YSP+ YSPSST +Y+P
Sbjct: 1814 TGSTYSATSPRYSPNMSIYSPSST-KYSP 1841
Score = 82.0 bits (201), Expect = 2e-14
Identities = 45/85 (52%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQ 378
SPS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP+
Sbjct: 1765 SPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 1824
Query: 377 FSPSTG-YSPSQPGYSPSSTSQYTP 306
+SP+ YSPS YSP+S + YTP
Sbjct: 1825 YSPNMSIYSPSSTKYSPTSPT-YTP 1848
Score = 78.2 bits (191), Expect = 3e-13
Identities = 50/97 (51%), Positives = 59/97 (60%), Gaps = 19/97 (19%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPT-----SPSYSPS-----SP--TYSPSSPYNSGVSPDYSP 390
S+ YSP+S YSPTSP YSPT SPS++ S SP YSPSS S SP YSP
Sbjct: 1628 STGYSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSP 1687
Query: 389 SSPQFSPST-GYSPSQPGYSPSSTS------QYTPQT 300
+SP +SPS+ YSP+ P YSP+S S YTP T
Sbjct: 1688 TSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1724
Score = 76.6 bits (187), Expect = 1e-12
Identities = 49/98 (50%), Positives = 55/98 (56%), Gaps = 20/98 (20%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 369
SPSSP SP Y P SPS SPSYSP+SP Y+ SSP G SP+YSPSSP +SP
Sbjct: 1557 SPSSPGPSMSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSP 1610
Query: 368 -----------------STGYSPSQPGYSPSSTSQYTP 306
STGYSPS GYSP+S Y+P
Sbjct: 1611 LYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPG-YSP 1647
Score = 71.6 bits (174), Expect = 3e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 366
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1830 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1885
Score = 66.2 bits (160), Expect = 1e-09
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 16/92 (17%)
Frame = -2
Query: 530 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 381
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSP 1584
Query: 380 QFSPST------GYSPSQPGYSPSSTSQYTPQ 303
++ S+ YSPS P YSP+S +P+
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTSPLYASPR 1616
Score = 64.3 bits (155), Expect = 5e-09
Identities = 31/41 (75%), Positives = 36/41 (87%), Gaps = 2/41 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 423
SP+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1840 SPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1880
[130][TOP]
>UniRef100_A9UNH9 DNA-directed RNA polymerase n=1 Tax=Drosophila melanogaster
RepID=A9UNH9_DROME
Length = 1887
Score = 105 bits (262), Expect = 2e-21
Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
SP + YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P T
Sbjct: 1666 SPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTP 1725
Query: 362 GYSPSQPGYSPSSTSQYTPQTNDKDERG 279
YSP+ P YS S QY+P + + G
Sbjct: 1726 SYSPTSPNYSAS--PQYSPASPAYSQTG 1751
Score = 104 bits (259), Expect = 5e-21
Identities = 49/79 (62%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSP+SPSYSPTSP YSP+SP+YSP+SP + V+P YSP+SP +S S
Sbjct: 1679 SPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASP 1738
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YS + +Y+P
Sbjct: 1739 QYSPASPAYSQTGV-KYSP 1756
Score = 96.7 bits (239), Expect = 9e-19
Identities = 55/95 (57%), Positives = 66/95 (69%), Gaps = 17/95 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P S SP+YS +SPQ+SP+
Sbjct: 1686 SPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPQYSPAS 1744
Query: 365 -----TG--YSPSQPGYSPSSTS--------QYTP 306
TG YSP+ P YSP S S QYTP
Sbjct: 1745 PAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1779
Score = 89.7 bits (221), Expect = 1e-16
Identities = 53/109 (48%), Positives = 66/109 (60%), Gaps = 31/109 (28%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSP 423
SP+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1707 SPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPSP 1766
Query: 422 YNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 306
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1767 SYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1813
Score = 86.7 bits (213), Expect = 1e-15
Identities = 48/100 (48%), Positives = 60/100 (60%), Gaps = 22/100 (22%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP------- 402
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1771 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1830
Query: 401 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 306
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1831 IYSPSSTKYSPTSPTYTPTARNYSPTPPMYSPTAPSHYSP 1870
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/96 (51%), Positives = 59/96 (61%), Gaps = 20/96 (20%)
Frame = -2
Query: 533 SSPYSPTSPNYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSPYNSG 411
SS YSPTSP YSPT SPS YSP+S +YSP+SP+YSP+SP S
Sbjct: 1635 SSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSP 1694
Query: 410 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
SP YSP+SP +SP S YSP+ P Y+P T Y+P
Sbjct: 1695 SSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 1729
Score = 82.8 bits (203), Expect = 1e-14
Identities = 40/74 (54%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 366
SPS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+ P +SP+
Sbjct: 1806 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTPPMYSPTAP 1865
Query: 365 TGYSPSQPGYSPSS 324
+ YSP+ P YSPSS
Sbjct: 1866 SHYSPTSPAYSPSS 1879
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/89 (55%), Positives = 60/89 (67%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP YSP SP+Y SP SP Y+P SP YSP+SP YSP+SP S SP +SPS+ Q+SP
Sbjct: 1755 SPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSP 1813
Query: 368 --------STGYSPSQPGYSPSSTSQYTP 306
S YSP+ YSPSST +Y+P
Sbjct: 1814 TGSTYSATSPRYSPNMSIYSPSST-KYSP 1841
Score = 82.0 bits (201), Expect = 2e-14
Identities = 45/85 (52%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQ 378
SPS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP+
Sbjct: 1765 SPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 1824
Query: 377 FSPSTG-YSPSQPGYSPSSTSQYTP 306
+SP+ YSPS YSP+S + YTP
Sbjct: 1825 YSPNMSIYSPSSTKYSPTSPT-YTP 1848
Score = 77.4 bits (189), Expect = 6e-13
Identities = 50/97 (51%), Positives = 59/97 (60%), Gaps = 19/97 (19%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPT-----SPSYSPS-----SP--TYSPSSPYNSGVSPDYSP 390
S+ YSP+S YSPTSP YSPT SPS++ S SP YSPSS S SP YSP
Sbjct: 1628 STGYSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSP 1687
Query: 389 SSPQFSPST-GYSPSQPGYSPSSTS------QYTPQT 300
+SP +SPS+ YSP+ P YSP+S S YTP T
Sbjct: 1688 TSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1724
Score = 75.9 bits (185), Expect = 2e-12
Identities = 47/92 (51%), Positives = 52/92 (56%), Gaps = 20/92 (21%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 369
SPSSP SP Y P SPS SPSYSP+SP Y+ SSP G SP+YSPSSP +SP
Sbjct: 1557 SPSSPGPSMSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSP 1610
Query: 368 -----------------STGYSPSQPGYSPSS 324
STGYSPS GYSP+S
Sbjct: 1611 LYASPRYASTTPNFNPQSTGYSPSSSGYSPTS 1642
Score = 69.7 bits (169), Expect = 1e-10
Identities = 33/56 (58%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 366
S YSP+S YSPTSP+Y+PT+ +YSP+ P YSP++P + S SP YSPSSP F S
Sbjct: 1830 SIYSPSSTKYSPTSPTYTPTARNYSPTPPMYSPTAPSHYSPTSPAYSPSSPTFEES 1885
Score = 66.2 bits (160), Expect = 1e-09
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 16/92 (17%)
Frame = -2
Query: 530 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 381
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSP 1584
Query: 380 QFSPST------GYSPSQPGYSPSSTSQYTPQ 303
++ S+ YSPS P YSP+S +P+
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTSPLYASPR 1616
Score = 62.4 bits (150), Expect = 2e-08
Identities = 30/41 (73%), Positives = 35/41 (85%), Gaps = 2/41 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 423
SP+SP Y+PT+ NYSPT P YSPT+PS YSP+SP YSPSSP
Sbjct: 1840 SPTSPTYTPTARNYSPTPPMYSPTAPSHYSPTSPAYSPSSP 1880
[131][TOP]
>UniRef100_A7AWJ0 DNA-directed RNA polymerase n=1 Tax=Babesia bovis RepID=A7AWJ0_BABBO
Length = 1746
Score = 105 bits (262), Expect = 2e-21
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1603 SPASPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1662
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1663 PAYSPTSPAYSPTSPA-YSP 1681
Score = 105 bits (262), Expect = 2e-21
Identities = 51/74 (68%), Positives = 60/74 (81%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1610 SPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1669
Query: 365 TGYSPSQPGYSPSS 324
YSP+ P YSP+S
Sbjct: 1670 PAYSPTSPAYSPTS 1683
Score = 103 bits (258), Expect = 6e-21
Identities = 51/82 (62%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP++
Sbjct: 1624 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1683
Query: 362 ---GYSPSQPGYSPSSTSQYTP 306
GY P+ P Y P+S + Y+P
Sbjct: 1684 PNLGYLPTSPAYRPTSPA-YSP 1704
Score = 101 bits (251), Expect = 4e-20
Identities = 53/82 (64%), Positives = 63/82 (76%), Gaps = 4/82 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1617 SPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1676
Query: 365 TGYSPSQP--GYSPSSTSQYTP 306
YSP+ P GY P+S + Y P
Sbjct: 1677 PAYSPTSPNLGYLPTSPA-YRP 1697
Score = 100 bits (248), Expect = 9e-20
Identities = 52/87 (59%), Positives = 61/87 (70%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSP SP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+S
Sbjct: 1589 SPTSPVYGQAGGVYSPASPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTS 1648
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P +SP S YSP+ P YSP+S + Y+P
Sbjct: 1649 PAYSPTSPAYSPTSPAYSPTSPA-YSP 1674
Score = 99.4 bits (246), Expect = 1e-19
Identities = 53/90 (58%), Positives = 66/90 (73%), Gaps = 11/90 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG---VSPDYSPSSPQFS 372
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP N G SP Y P+SP +S
Sbjct: 1645 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP-NLGYLPTSPAYRPTSPAYS 1703
Query: 371 P-STGYSPSQPGYSPSS------TSQYTPQ 303
P S YSP+ P YSP+S + +Y+P+
Sbjct: 1704 PTSPAYSPTSPAYSPTSPVYSPTSPEYSPE 1733
Score = 94.0 bits (232), Expect = 6e-18
Identities = 49/89 (55%), Positives = 64/89 (71%), Gaps = 4/89 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPS--YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP YSPTSP YSPTSP+YSPTSP+ Y P+SP Y P+SP S SP YSP+SP +SP
Sbjct: 1659 SPTSPAYSPTSPAYSPTSPAYSPTSPNLGYLPTSPAYRPTSPAYSPTSPAYSPTSPAYSP 1718
Query: 368 STG-YSPSQPGYSPSSTSQYTPQTNDKDE 285
++ YSP+ P YSP ++P +++E
Sbjct: 1719 TSPVYSPTSPEYSPE--DPFSPNPFEEEE 1745
Score = 92.0 bits (227), Expect = 2e-17
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP Y YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1582 SPTSPVYSPTSPVYGQAGGVYSPASPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTS 1641
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1642 PAYSPTSPAYSPTSPA-YSP 1660
Score = 84.0 bits (206), Expect = 6e-15
Identities = 51/100 (51%), Positives = 60/100 (60%), Gaps = 22/100 (22%)
Frame = -2
Query: 539 SPSSP-YSPTSPN-------------YSPTSPSYSPTSP-------SYSPSSPTYSPSSP 423
SP SP Y+P SPN SPTSP YSPTSP YSP+SP YSP+SP
Sbjct: 1555 SPVSPSYAPLSPNPLSPNPLSPSMGMMSPTSPVYSPTSPVYGQAGGVYSPASPAYSPTSP 1614
Query: 422 YNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1615 LYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1653
Score = 53.9 bits (128), Expect = 7e-06
Identities = 37/73 (50%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Frame = -2
Query: 524 YSPT--SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN---SGVSPDYSPSSPQFSPSTG 360
+SPT SP SP SPSY+P SP+ P SP +P SP S SP YSP+SP + + G
Sbjct: 1546 FSPTIMSPQ-SPVSPSYAPLSPN--PLSP--NPLSPSMGMMSPTSPVYSPTSPVYGQAGG 1600
Query: 359 -YSPSQPGYSPSS 324
YSP+ P YSP+S
Sbjct: 1601 VYSPASPAYSPTS 1613
[132][TOP]
>UniRef100_P04052 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Drosophila
melanogaster RepID=RPB1_DROME
Length = 1887
Score = 105 bits (262), Expect = 2e-21
Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
SP + YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P T
Sbjct: 1666 SPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTP 1725
Query: 362 GYSPSQPGYSPSSTSQYTPQTNDKDERG 279
YSP+ P YS S QY+P + + G
Sbjct: 1726 SYSPTSPNYSAS--PQYSPASPAYSQTG 1751
Score = 104 bits (259), Expect = 5e-21
Identities = 49/79 (62%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSP+SPSYSPTSP YSP+SP+YSP+SP + V+P YSP+SP +S S
Sbjct: 1679 SPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASP 1738
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YS + +Y+P
Sbjct: 1739 QYSPASPAYSQTGV-KYSP 1756
Score = 96.7 bits (239), Expect = 9e-19
Identities = 55/95 (57%), Positives = 66/95 (69%), Gaps = 17/95 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
SP+SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P S SP+YS +SPQ+SP+
Sbjct: 1686 SPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPQYSPAS 1744
Query: 365 -----TG--YSPSQPGYSPSSTS--------QYTP 306
TG YSP+ P YSP S S QYTP
Sbjct: 1745 PAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1779
Score = 89.7 bits (221), Expect = 1e-16
Identities = 53/109 (48%), Positives = 66/109 (60%), Gaps = 31/109 (28%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSP 423
SP+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1707 SPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPSP 1766
Query: 422 YNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 306
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1767 SYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1813
Score = 87.0 bits (214), Expect = 8e-16
Identities = 48/100 (48%), Positives = 60/100 (60%), Gaps = 22/100 (22%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP------- 402
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1771 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1830
Query: 401 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 306
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1831 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1870
Score = 84.7 bits (208), Expect = 4e-15
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 366
SPS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+
Sbjct: 1806 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1865
Query: 365 TGYSPSQPGYSPSS 324
+ YSP+ P YSPSS
Sbjct: 1866 SHYSPTSPAYSPSS 1879
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/96 (51%), Positives = 59/96 (61%), Gaps = 20/96 (20%)
Frame = -2
Query: 533 SSPYSPTSPNYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSPYNSG 411
SS YSPTSP YSPT SPS YSP+S +YSP+SP+YSP+SP S
Sbjct: 1635 SSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSP 1694
Query: 410 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
SP YSP+SP +SP S YSP+ P Y+P T Y+P
Sbjct: 1695 SSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 1729
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/89 (55%), Positives = 60/89 (67%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP YSP SP+Y SP SP Y+P SP YSP+SP YSP+SP S SP +SPS+ Q+SP
Sbjct: 1755 SPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSP 1813
Query: 368 --------STGYSPSQPGYSPSSTSQYTP 306
S YSP+ YSPSST +Y+P
Sbjct: 1814 TGSTYSATSPRYSPNMSIYSPSST-KYSP 1841
Score = 82.0 bits (201), Expect = 2e-14
Identities = 45/85 (52%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQ 378
SPS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP+
Sbjct: 1765 SPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 1824
Query: 377 FSPSTG-YSPSQPGYSPSSTSQYTP 306
+SP+ YSPS YSP+S + YTP
Sbjct: 1825 YSPNMSIYSPSSTKYSPTSPT-YTP 1848
Score = 77.4 bits (189), Expect = 6e-13
Identities = 50/97 (51%), Positives = 59/97 (60%), Gaps = 19/97 (19%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPT-----SPSYSPS-----SP--TYSPSSPYNSGVSPDYSP 390
S+ YSP+S YSPTSP YSPT SPS++ S SP YSPSS S SP YSP
Sbjct: 1628 STGYSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSP 1687
Query: 389 SSPQFSPST-GYSPSQPGYSPSSTS------QYTPQT 300
+SP +SPS+ YSP+ P YSP+S S YTP T
Sbjct: 1688 TSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1724
Score = 75.9 bits (185), Expect = 2e-12
Identities = 47/92 (51%), Positives = 52/92 (56%), Gaps = 20/92 (21%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP--- 369
SPSSP SP Y P SPS SPSYSP+SP Y+ SSP G SP+YSPSSP +SP
Sbjct: 1557 SPSSPGPSMSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSP 1610
Query: 368 -----------------STGYSPSQPGYSPSS 324
STGYSPS GYSP+S
Sbjct: 1611 LYASPRYASTTPNFNPQSTGYSPSSSGYSPTS 1642
Score = 71.6 bits (174), Expect = 3e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 366
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1830 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1885
Score = 66.2 bits (160), Expect = 1e-09
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 16/92 (17%)
Frame = -2
Query: 530 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 381
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSP 1584
Query: 380 QFSPST------GYSPSQPGYSPSSTSQYTPQ 303
++ S+ YSPS P YSP+S +P+
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTSPLYASPR 1616
Score = 64.3 bits (155), Expect = 5e-09
Identities = 31/41 (75%), Positives = 36/41 (87%), Gaps = 2/41 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 423
SP+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1840 SPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1880
[133][TOP]
>UniRef100_C5Y387 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5Y387_SORBI
Length = 1874
Score = 105 bits (261), Expect = 3e-21
Identities = 54/87 (62%), Positives = 65/87 (74%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-- 369
SP+SP YSP S +YSPTSP YSPTSPSYSP+S +YSP+SP+ S SP YSPSSP +SP
Sbjct: 1674 SPTSPSYSPASLSYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPSSPSYSPTS 1733
Query: 368 ------STGYSPSQPGYSPSSTSQYTP 306
S GYSP+ PGYSP+S + Y+P
Sbjct: 1734 PTYSPTSLGYSPTSPGYSPTSPT-YSP 1759
Score = 98.2 bits (243), Expect = 3e-19
Identities = 52/89 (58%), Positives = 61/89 (68%), Gaps = 9/89 (10%)
Frame = -2
Query: 539 SPSSP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTSP YSPTSPSYSP+SPSYSP+SPTYSP+S S SP YSP+S
Sbjct: 1695 SPTSPSYSPASLSYSPTSPFYSPTSPSYSPSSPSYSPTSPTYSPTSLGYSPTSPGYSPTS 1754
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTPQT 300
P +SP S YSP+ P Y+ S T + T
Sbjct: 1755 PTYSPTSPNYSPTSPSYNLSYTEYNSSNT 1783
Score = 97.8 bits (242), Expect = 4e-19
Identities = 50/79 (63%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
S S YSP S +YSPTSP YSPTSPSYSP+S +YSP+SP+ S SP YSP+S +SP S
Sbjct: 1654 STSPSYSPASASYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPASLSYSPTSP 1713
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YSPSS S Y+P
Sbjct: 1714 FYSPTSPSYSPSSPS-YSP 1731
Score = 93.6 bits (231), Expect = 8e-18
Identities = 51/84 (60%), Positives = 63/84 (75%), Gaps = 4/84 (4%)
Frame = -2
Query: 539 SPSSP-YSPTS--PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
+PSSP +SPTS P+YSP S SYSPTSP YSP+SP+YSP+S S SP YSP+SP +SP
Sbjct: 1644 NPSSPSFSPTSTSPSYSPASASYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSP 1703
Query: 368 -STGYSPSQPGYSPSSTSQYTPQT 300
S YSP+ P YSP+S S Y+P +
Sbjct: 1704 ASLSYSPTSPFYSPTSPS-YSPSS 1726
Score = 92.0 bits (227), Expect = 2e-17
Identities = 53/106 (50%), Positives = 61/106 (57%), Gaps = 17/106 (16%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPD------------ 399
SPSSP YSPTSP YSPTS YSPTSP YSP+SPTYSP+SP S SP
Sbjct: 1723 SPSSPSYSPTSPTYSPTSLGYSPTSPGYSPTSPTYSPTSPNYSPTSPSYNLSYTEYNSSN 1782
Query: 398 -YSPSSPQF---SPSTGYSPSQPGYSPSSTSQYTPQTNDKDERGKD 273
YSP+ P+ S + YSP+ P YSP+S S P + R D
Sbjct: 1783 TYSPTRPRITLDSQAPDYSPTSPTYSPTSPSYSLPSLSYSPNRPTD 1828
Score = 84.7 bits (208), Expect = 4e-15
Identities = 44/75 (58%), Positives = 49/75 (65%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
S + YSPTSP YSPTSPSYS S SYSP+ PT P SPDYSP+SP FSP+
Sbjct: 1795 SQAPDYSPTSPTYSPTSPSYSLPSLSYSPNRPTDDSGRP-----SPDYSPTSPNFSPNRS 1849
Query: 359 YSPSQPGYSPSSTSQ 315
SP+ YSPSST Q
Sbjct: 1850 DSPTAADYSPSSTGQ 1864
Score = 82.4 bits (202), Expect = 2e-14
Identities = 51/124 (41%), Positives = 62/124 (50%), Gaps = 47/124 (37%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP--------YNSG-------- 411
SP+SP YSPTS YSPTSP YSPTSP+YSP+SP YSP+SP YNS
Sbjct: 1730 SPTSPTYSPTSLGYSPTSPGYSPTSPTYSPTSPNYSPTSPSYNLSYTEYNSSNTYSPTRP 1789
Query: 410 ------VSPDYSPSSPQFSP------------------------STGYSPSQPGYSPSST 321
+PDYSP+SP +SP S YSP+ P +SP+ +
Sbjct: 1790 RITLDSQAPDYSPTSPTYSPTSPSYSLPSLSYSPNRPTDDSGRPSPDYSPTSPNFSPNRS 1849
Query: 320 SQYT 309
T
Sbjct: 1850 DSPT 1853
Score = 79.3 bits (194), Expect = 2e-13
Identities = 45/97 (46%), Positives = 60/97 (61%), Gaps = 19/97 (19%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSP------TYSPSSPYNSGVSPD---YSPS 387
S S+ Y+P SP YSPT+P Y+P SP YSP++P +YS +SP + +SP+ Y+PS
Sbjct: 1587 STSTSYTPVSPVYSPTTPVYTPMSPVYSPTTPVSSQIQSYSSASPIYNPISPNSSRYNPS 1646
Query: 386 SPQFSP----------STGYSPSQPGYSPSSTSQYTP 306
SP FSP S YSP+ P YSP+S S Y+P
Sbjct: 1647 SPSFSPTSTSPSYSPASASYSPTSPFYSPTSPS-YSP 1682
Score = 71.6 bits (174), Expect = 3e-11
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 11/86 (12%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP------DYSPSSPQFSP 369
+PY+ SP + TS SY+P SP YSP++P Y+P SP S +P YS +SP ++P
Sbjct: 1576 TPYNAASPVNASTSTSYTPVSPVYSPTTPVYTPMSPVYSPTTPVSSQIQSYSSASPIYNP 1635
Query: 368 ----STGYSPSQPGYSPSSTS-QYTP 306
S+ Y+PS P +SP+STS Y+P
Sbjct: 1636 ISPNSSRYNPSSPSFSPTSTSPSYSP 1661
Score = 62.8 bits (151), Expect = 2e-08
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Frame = -2
Query: 524 YSPTSPNYSP---TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYS 354
Y SP Y+P SP + TS SY+P SP YSP++P + +SP YSP++P S YS
Sbjct: 1568 YMAVSPIYTPYNAASPVNASTSTSYTPVSPVYSPTTPVYTPMSPVYSPTTPVSSQIQSYS 1627
Query: 353 PSQPGYSPSS--TSQYTPQT 300
+ P Y+P S +S+Y P +
Sbjct: 1628 SASPIYNPISPNSSRYNPSS 1647
[134][TOP]
>UniRef100_Q9XZU8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Drosophila
pseudoobscura pseudoobscura RepID=Q9XZU8_DROPS
Length = 1811
Score = 104 bits (260), Expect = 3e-21
Identities = 51/88 (57%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
SP + YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P+T
Sbjct: 1590 SPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATP 1649
Query: 362 GYSPSQPGYSPSSTSQYTPQTNDKDERG 279
YSP+ P YS S Y+P + + G
Sbjct: 1650 SYSPTSPNYSAS--PHYSPASPAYSQTG 1675
Score = 103 bits (256), Expect = 1e-20
Identities = 48/79 (60%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S
Sbjct: 1603 SPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASP 1662
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YS + ++Y+P
Sbjct: 1663 HYSPASPAYSQTG-AKYSP 1680
Score = 95.9 bits (237), Expect = 2e-18
Identities = 52/94 (55%), Positives = 63/94 (67%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSP 381
SP+SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P++P N SP YSP+SP
Sbjct: 1610 SPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASP 1669
Query: 380 QFSPS-TGYSPSQPGYSPSSTS--------QYTP 306
+S + YSP+ P YSP S S QYTP
Sbjct: 1670 AYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTP 1703
Score = 89.7 bits (221), Expect = 1e-16
Identities = 48/88 (54%), Positives = 63/88 (71%), Gaps = 7/88 (7%)
Frame = -2
Query: 539 SPSSPYSPT-SPNYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SP P SP+ SP+YSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P
Sbjct: 1488 SPYYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAASPRYASTTPN 1547
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTPQTN 297
F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1548 FNPQSTGYSPSASGYSPTS-PVYSPTSN 1574
Score = 89.7 bits (221), Expect = 1e-16
Identities = 53/109 (48%), Positives = 66/109 (60%), Gaps = 31/109 (28%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSP 423
SP+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1631 SPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSP 1690
Query: 422 YNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 306
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1691 SYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1737
Score = 87.0 bits (214), Expect = 8e-16
Identities = 48/100 (48%), Positives = 60/100 (60%), Gaps = 22/100 (22%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP------- 402
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1695 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1754
Query: 401 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 306
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1755 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1794
Score = 84.7 bits (208), Expect = 4e-15
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 366
SPS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+
Sbjct: 1730 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1789
Query: 365 TGYSPSQPGYSPSS 324
+ YSP+ P YSPSS
Sbjct: 1790 SHYSPTSPAYSPSS 1803
Score = 84.3 bits (207), Expect = 5e-15
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 375
S S YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ +SP + +P+++P S +
Sbjct: 1496 SVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGY 1555
Query: 374 SPS-TGYSPSQPGYSPSSTSQYTP 306
SPS +GYSP+ P YSP+S +P
Sbjct: 1556 SPSASGYSPTSPVYSPTSNFPSSP 1579
Score = 83.6 bits (205), Expect = 8e-15
Identities = 51/99 (51%), Positives = 62/99 (62%), Gaps = 21/99 (21%)
Frame = -2
Query: 539 SPS-SPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSPY 420
SPS S YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP
Sbjct: 1556 SPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPS 1615
Query: 419 NSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P Y+P +T Y+P
Sbjct: 1616 YSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-ATPSYSP 1653
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/89 (55%), Positives = 60/89 (67%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP YSP SP+Y SP SP Y+P SP YSP+SP YSP+SP S SP +SPS+ Q+SP
Sbjct: 1679 SPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSP 1737
Query: 368 --------STGYSPSQPGYSPSSTSQYTP 306
S YSP+ YSPSST +Y+P
Sbjct: 1738 TGSTYSATSPRYSPNMSIYSPSST-KYSP 1765
Score = 82.0 bits (201), Expect = 2e-14
Identities = 45/85 (52%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQ 378
SPS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP+
Sbjct: 1689 SPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 1748
Query: 377 FSPSTG-YSPSQPGYSPSSTSQYTP 306
+SP+ YSPS YSP+S + YTP
Sbjct: 1749 YSPNMSIYSPSSTKYSPTSPT-YTP 1772
Score = 78.6 bits (192), Expect = 3e-13
Identities = 54/129 (41%), Positives = 62/129 (48%), Gaps = 49/129 (37%)
Frame = -2
Query: 539 SPSSP-YSPTSP---------------------NYSPTSPSYSPTSP------------- 465
SPSSP YSPTSP YSP++ YSPTSP
Sbjct: 1521 SPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPS 1580
Query: 464 -------------SYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPS 327
+YSPSS YSP+SP S SP YSPSSP +SP S YSP+ P YSP+
Sbjct: 1581 FAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPT 1640
Query: 326 STSQYTPQT 300
S + YTP T
Sbjct: 1641 SPN-YTPAT 1648
Score = 71.6 bits (174), Expect = 3e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 366
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1754 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1809
Score = 65.1 bits (157), Expect = 3e-09
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 16/85 (18%)
Frame = -2
Query: 530 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 381
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 1447 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPSYSPTSP 1506
Query: 380 QFSPST------GYSPSQPGYSPSS 324
++ S+ YSPS P YSP+S
Sbjct: 1507 NYTASSPGGASPNYSPSSPNYSPTS 1531
Score = 64.3 bits (155), Expect = 5e-09
Identities = 31/41 (75%), Positives = 36/41 (87%), Gaps = 2/41 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 423
SP+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1764 SPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1804
[135][TOP]
>UniRef100_Q9XZS1 DNA-directed RNA polymerase n=1 Tax=Drosophila guanche
RepID=Q9XZS1_DROGU
Length = 1889
Score = 104 bits (260), Expect = 3e-21
Identities = 51/88 (57%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
SP + YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P+T
Sbjct: 1668 SPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATP 1727
Query: 362 GYSPSQPGYSPSSTSQYTPQTNDKDERG 279
YSP+ P YS S Y+P + + G
Sbjct: 1728 SYSPTSPNYSAS--PHYSPASPAYSQTG 1753
Score = 103 bits (256), Expect = 1e-20
Identities = 48/79 (60%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S
Sbjct: 1681 SPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASP 1740
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YS + ++Y+P
Sbjct: 1741 HYSPASPAYSQTG-AKYSP 1758
Score = 95.9 bits (237), Expect = 2e-18
Identities = 52/94 (55%), Positives = 63/94 (67%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSP 381
SP+SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P++P N SP YSP+SP
Sbjct: 1688 SPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASP 1747
Query: 380 QFSPS-TGYSPSQPGYSPSSTS--------QYTP 306
+S + YSP+ P YSP S S QYTP
Sbjct: 1748 AYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 89.7 bits (221), Expect = 1e-16
Identities = 53/109 (48%), Positives = 66/109 (60%), Gaps = 31/109 (28%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSP 423
SP+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1709 SPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSP 1768
Query: 422 YNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 306
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1769 SYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 89.0 bits (219), Expect = 2e-16
Identities = 48/88 (54%), Positives = 63/88 (71%), Gaps = 7/88 (7%)
Frame = -2
Query: 539 SPSSPYSPT-SPNYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SP P SP+ SP+YSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P
Sbjct: 1566 SPYYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPN 1625
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTPQTN 297
F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1626 FNPQSTGYSPSASGYSPTS-PVYSPTSN 1652
Score = 87.0 bits (214), Expect = 8e-16
Identities = 48/100 (48%), Positives = 60/100 (60%), Gaps = 22/100 (22%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP------- 402
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 401 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 306
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 84.7 bits (208), Expect = 4e-15
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 366
SPS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867
Query: 365 TGYSPSQPGYSPSS 324
+ YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881
Score = 83.6 bits (205), Expect = 8e-15
Identities = 41/84 (48%), Positives = 58/84 (69%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 375
S S YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ SP + +P+++P S +
Sbjct: 1574 SVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGY 1633
Query: 374 SPS-TGYSPSQPGYSPSSTSQYTP 306
SPS +GYSP+ P YSP+S +P
Sbjct: 1634 SPSASGYSPTSPVYSPTSNFPSSP 1657
Score = 83.6 bits (205), Expect = 8e-15
Identities = 51/99 (51%), Positives = 62/99 (62%), Gaps = 21/99 (21%)
Frame = -2
Query: 539 SPS-SPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSPY 420
SPS S YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP
Sbjct: 1634 SPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPS 1693
Query: 419 NSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P Y+P +T Y+P
Sbjct: 1694 YSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-ATPSYSP 1731
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/89 (55%), Positives = 60/89 (67%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP YSP SP+Y SP SP Y+P SP YSP+SP YSP+SP S SP +SPS+ Q+SP
Sbjct: 1757 SPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSP 1815
Query: 368 --------STGYSPSQPGYSPSSTSQYTP 306
S YSP+ YSPSST +Y+P
Sbjct: 1816 TGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 82.0 bits (201), Expect = 2e-14
Identities = 45/85 (52%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQ 378
SPS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP+
Sbjct: 1767 SPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 1826
Query: 377 FSPSTG-YSPSQPGYSPSSTSQYTP 306
+SP+ YSPS YSP+S + YTP
Sbjct: 1827 YSPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 77.4 bits (189), Expect = 6e-13
Identities = 53/133 (39%), Positives = 60/133 (45%), Gaps = 55/133 (41%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSP----------------------------SYSPTSP--------- 465
S YSP+SPNYSPTSP YSPTSP
Sbjct: 1595 SPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFP 1654
Query: 464 -----------------SYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPG 339
+YSPSS YSP+SP S SP YSPSSP +SP S YSP+ P
Sbjct: 1655 SSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPS 1714
Query: 338 YSPSSTSQYTPQT 300
YSP+S + YTP T
Sbjct: 1715 YSPTSPN-YTPAT 1726
Score = 71.6 bits (174), Expect = 3e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 366
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1832 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 65.5 bits (158), Expect = 2e-09
Identities = 38/91 (41%), Positives = 50/91 (54%), Gaps = 16/91 (17%)
Frame = -2
Query: 530 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 381
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPSYSPTSP 1584
Query: 380 QFSPST------GYSPSQPGYSPSSTSQYTP 306
++ S+ YSPS P YSP+S P
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTSPLYAAP 1615
Score = 64.3 bits (155), Expect = 5e-09
Identities = 31/41 (75%), Positives = 36/41 (87%), Gaps = 2/41 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 423
SP+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1842 SPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
[136][TOP]
>UniRef100_Q29IN2 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura
pseudoobscura RepID=Q29IN2_DROPS
Length = 1889
Score = 104 bits (260), Expect = 3e-21
Identities = 51/88 (57%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
SP + YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P+T
Sbjct: 1668 SPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATP 1727
Query: 362 GYSPSQPGYSPSSTSQYTPQTNDKDERG 279
YSP+ P YS S Y+P + + G
Sbjct: 1728 SYSPTSPNYSAS--PHYSPASPAYSQTG 1753
Score = 103 bits (256), Expect = 1e-20
Identities = 48/79 (60%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S
Sbjct: 1681 SPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASP 1740
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YS + ++Y+P
Sbjct: 1741 HYSPASPAYSQTG-AKYSP 1758
Score = 95.9 bits (237), Expect = 2e-18
Identities = 52/94 (55%), Positives = 63/94 (67%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSP 381
SP+SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P++P N SP YSP+SP
Sbjct: 1688 SPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASP 1747
Query: 380 QFSPS-TGYSPSQPGYSPSSTS--------QYTP 306
+S + YSP+ P YSP S S QYTP
Sbjct: 1748 AYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 89.7 bits (221), Expect = 1e-16
Identities = 48/88 (54%), Positives = 63/88 (71%), Gaps = 7/88 (7%)
Frame = -2
Query: 539 SPSSPYSPT-SPNYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SP P SP+ SP+YSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P
Sbjct: 1566 SPYYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAASPRYASTTPN 1625
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTPQTN 297
F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1626 FNPQSTGYSPSASGYSPTS-PVYSPTSN 1652
Score = 89.7 bits (221), Expect = 1e-16
Identities = 53/109 (48%), Positives = 66/109 (60%), Gaps = 31/109 (28%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSP 423
SP+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1709 SPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSP 1768
Query: 422 YNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 306
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1769 SYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 87.0 bits (214), Expect = 8e-16
Identities = 48/100 (48%), Positives = 60/100 (60%), Gaps = 22/100 (22%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP------- 402
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 401 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 306
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 84.7 bits (208), Expect = 4e-15
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 366
SPS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867
Query: 365 TGYSPSQPGYSPSS 324
+ YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881
Score = 84.3 bits (207), Expect = 5e-15
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 375
S S YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ +SP + +P+++P S +
Sbjct: 1574 SVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGY 1633
Query: 374 SPS-TGYSPSQPGYSPSSTSQYTP 306
SPS +GYSP+ P YSP+S +P
Sbjct: 1634 SPSASGYSPTSPVYSPTSNFPSSP 1657
Score = 83.6 bits (205), Expect = 8e-15
Identities = 51/99 (51%), Positives = 62/99 (62%), Gaps = 21/99 (21%)
Frame = -2
Query: 539 SPS-SPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSPY 420
SPS S YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP
Sbjct: 1634 SPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPS 1693
Query: 419 NSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P Y+P +T Y+P
Sbjct: 1694 YSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-ATPSYSP 1731
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/89 (55%), Positives = 60/89 (67%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP YSP SP+Y SP SP Y+P SP YSP+SP YSP+SP S SP +SPS+ Q+SP
Sbjct: 1757 SPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSP 1815
Query: 368 --------STGYSPSQPGYSPSSTSQYTP 306
S YSP+ YSPSST +Y+P
Sbjct: 1816 TGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 82.0 bits (201), Expect = 2e-14
Identities = 45/85 (52%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQ 378
SPS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP+
Sbjct: 1767 SPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 1826
Query: 377 FSPSTG-YSPSQPGYSPSSTSQYTP 306
+SP+ YSPS YSP+S + YTP
Sbjct: 1827 YSPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 78.6 bits (192), Expect = 3e-13
Identities = 54/129 (41%), Positives = 62/129 (48%), Gaps = 49/129 (37%)
Frame = -2
Query: 539 SPSSP-YSPTSP---------------------NYSPTSPSYSPTSP------------- 465
SPSSP YSPTSP YSP++ YSPTSP
Sbjct: 1599 SPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPS 1658
Query: 464 -------------SYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPS 327
+YSPSS YSP+SP S SP YSPSSP +SP S YSP+ P YSP+
Sbjct: 1659 FAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPT 1718
Query: 326 STSQYTPQT 300
S + YTP T
Sbjct: 1719 SPN-YTPAT 1726
Score = 71.6 bits (174), Expect = 3e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 366
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1832 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 65.1 bits (157), Expect = 3e-09
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 16/85 (18%)
Frame = -2
Query: 530 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 381
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPSYSPTSP 1584
Query: 380 QFSPST------GYSPSQPGYSPSS 324
++ S+ YSPS P YSP+S
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTS 1609
Score = 64.3 bits (155), Expect = 5e-09
Identities = 31/41 (75%), Positives = 36/41 (87%), Gaps = 2/41 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 423
SP+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1842 SPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
[137][TOP]
>UniRef100_B4H2R8 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis
RepID=B4H2R8_DROPE
Length = 1804
Score = 104 bits (260), Expect = 3e-21
Identities = 51/88 (57%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
SP + YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P+T
Sbjct: 1602 SPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATP 1661
Query: 362 GYSPSQPGYSPSSTSQYTPQTNDKDERG 279
YSP+ P YS S Y+P + + G
Sbjct: 1662 SYSPTSPNYSAS--PHYSPASPAYSQTG 1687
Score = 103 bits (256), Expect = 1e-20
Identities = 48/79 (60%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S
Sbjct: 1615 SPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASP 1674
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YS + ++Y+P
Sbjct: 1675 HYSPASPAYSQTG-AKYSP 1692
Score = 95.9 bits (237), Expect = 2e-18
Identities = 52/94 (55%), Positives = 63/94 (67%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSP 381
SP+SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P++P N SP YSP+SP
Sbjct: 1622 SPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASP 1681
Query: 380 QFSPS-TGYSPSQPGYSPSSTS--------QYTP 306
+S + YSP+ P YSP S S QYTP
Sbjct: 1682 AYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTP 1715
Score = 89.7 bits (221), Expect = 1e-16
Identities = 53/109 (48%), Positives = 66/109 (60%), Gaps = 31/109 (28%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSP 423
SP+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1643 SPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSP 1702
Query: 422 YNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 306
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1703 SYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1749
Score = 84.7 bits (208), Expect = 4e-15
Identities = 42/85 (49%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
+P SP YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ +SP + +P+++P S
Sbjct: 1507 TPVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTG 1566
Query: 377 FSPS-TGYSPSQPGYSPSSTSQYTP 306
+SPS +GYSP+ P YSP+S +P
Sbjct: 1567 YSPSASGYSPTSPVYSPTSNFPSSP 1591
Score = 83.6 bits (205), Expect = 8e-15
Identities = 51/99 (51%), Positives = 62/99 (62%), Gaps = 21/99 (21%)
Frame = -2
Query: 539 SPS-SPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSPY 420
SPS S YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP
Sbjct: 1568 SPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPS 1627
Query: 419 NSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP S YSP+ P Y+P +T Y+P
Sbjct: 1628 YSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-ATPSYSP 1665
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/89 (55%), Positives = 60/89 (67%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP YSP SP+Y SP SP Y+P SP YSP+SP YSP+SP S SP +SPS+ Q+SP
Sbjct: 1691 SPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSP 1749
Query: 368 --------STGYSPSQPGYSPSSTSQYTP 306
S YSP+ YSPSST +Y+P
Sbjct: 1750 TGSTYSATSPRYSPNMSIYSPSST-KYSP 1777
Score = 82.0 bits (201), Expect = 2e-14
Identities = 45/85 (52%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQ 378
SPS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP+
Sbjct: 1701 SPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 1760
Query: 377 FSPSTG-YSPSQPGYSPSSTSQYTP 306
+SP+ YSPS YSP+S + YTP
Sbjct: 1761 YSPNMSIYSPSSTKYSPTSPT-YTP 1784
Score = 78.6 bits (192), Expect = 3e-13
Identities = 54/129 (41%), Positives = 62/129 (48%), Gaps = 49/129 (37%)
Frame = -2
Query: 539 SPSSP-YSPTSP---------------------NYSPTSPSYSPTSP------------- 465
SPSSP YSPTSP YSP++ YSPTSP
Sbjct: 1533 SPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPS 1592
Query: 464 -------------SYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPS 327
+YSPSS YSP+SP S SP YSPSSP +SP S YSP+ P YSP+
Sbjct: 1593 FAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPT 1652
Query: 326 STSQYTPQT 300
S + YTP T
Sbjct: 1653 SPN-YTPAT 1660
Score = 78.2 bits (191), Expect = 3e-13
Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 8/89 (8%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS---- 372
S + P +P SP+YSPTSP+Y+ +SP +SP YSPSSP S SP Y+ +SP+++
Sbjct: 1501 SMTPPMTPVSPSYSPTSPNYTASSPG--GASPNYSPSSPNYSPTSPLYAAASPRYASTTP 1558
Query: 371 ----PSTGYSPSQPGYSPSSTSQYTPQTN 297
STGYSPS GYSP+S Y+P +N
Sbjct: 1559 NFNPQSTGYSPSASGYSPTS-PVYSPTSN 1586
Score = 72.8 bits (177), Expect = 1e-11
Identities = 43/80 (53%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSPTSP YSP+SP +SP S YSP+ TYS +SP S YSPSS ++SP S
Sbjct: 1721 SPASPKYSPTSPLYSPSSPQHSP-SNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1779
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P+ YSP+S Y+P
Sbjct: 1780 PTYTPTARNYSPTSL-MYSP 1798
Score = 66.2 bits (160), Expect = 1e-09
Identities = 31/58 (53%), Positives = 39/58 (67%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 366
SPS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+S +SP+
Sbjct: 1742 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSLMYSPT 1799
[138][TOP]
>UniRef100_Q9XZU9 DNA-directed RNA polymerase n=1 Tax=Drosophila subobscura
RepID=Q9XZU9_DROSU
Length = 1889
Score = 104 bits (259), Expect = 5e-21
Identities = 49/79 (62%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSP+SPSYSPTSP YSPSSP+YSP+SP + +P YSP+SP +S S
Sbjct: 1681 SPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSASP 1740
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YS + ++Y+P
Sbjct: 1741 HYSPASPAYSQTG-AKYSP 1758
Score = 103 bits (258), Expect = 6e-21
Identities = 51/88 (57%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
SP + YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P+T
Sbjct: 1668 SPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATP 1727
Query: 362 GYSPSQPGYSPSSTSQYTPQTNDKDERG 279
YSP+ P YS S Y+P + + G
Sbjct: 1728 SYSPTSPNYSAS--PHYSPASPAYSQTG 1753
Score = 94.4 bits (233), Expect = 5e-18
Identities = 51/94 (54%), Positives = 63/94 (67%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSP 381
SP+SP YSP+SP+YSPTSP YSP+SPSYSP+SP Y+P++P N SP YSP+SP
Sbjct: 1688 SPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASP 1747
Query: 380 QFSPS-TGYSPSQPGYSPSSTS--------QYTP 306
+S + YSP+ P YSP S S QYTP
Sbjct: 1748 AYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 90.9 bits (224), Expect = 5e-17
Identities = 54/109 (49%), Positives = 66/109 (60%), Gaps = 31/109 (28%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSP 423
SPSSP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1709 SPSSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSP 1768
Query: 422 YNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 306
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1769 SYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 89.0 bits (219), Expect = 2e-16
Identities = 48/88 (54%), Positives = 63/88 (71%), Gaps = 7/88 (7%)
Frame = -2
Query: 539 SPSSPYSPT-SPNYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SP P SP+ SP+YSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P
Sbjct: 1566 SPFYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPN 1625
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTPQTN 297
F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1626 FNPQSTGYSPSASGYSPTS-PVYSPTSN 1652
Score = 87.0 bits (214), Expect = 8e-16
Identities = 48/100 (48%), Positives = 60/100 (60%), Gaps = 22/100 (22%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP------- 402
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 401 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 306
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 84.7 bits (208), Expect = 4e-15
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 366
SPS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867
Query: 365 TGYSPSQPGYSPSS 324
+ YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881
Score = 84.3 bits (207), Expect = 5e-15
Identities = 51/99 (51%), Positives = 63/99 (63%), Gaps = 21/99 (21%)
Frame = -2
Query: 539 SPS-SPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSPY 420
SPS S YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP
Sbjct: 1634 SPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPS 1693
Query: 419 NSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SPS+ YSP+ P Y+P +T Y+P
Sbjct: 1694 YSPSSPSYSPTSPCYSPSSPSYSPTSPNYTP-ATPSYSP 1731
Score = 83.6 bits (205), Expect = 8e-15
Identities = 41/84 (48%), Positives = 58/84 (69%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 375
S S YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ SP + +P+++P S +
Sbjct: 1574 SVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGY 1633
Query: 374 SPS-TGYSPSQPGYSPSSTSQYTP 306
SPS +GYSP+ P YSP+S +P
Sbjct: 1634 SPSASGYSPTSPVYSPTSNFPSSP 1657
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/89 (55%), Positives = 60/89 (67%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP YSP SP+Y SP SP Y+P SP YSP+SP YSP+SP S SP +SPS+ Q+SP
Sbjct: 1757 SPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSP 1815
Query: 368 --------STGYSPSQPGYSPSSTSQYTP 306
S YSP+ YSPSST +Y+P
Sbjct: 1816 TGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 82.0 bits (201), Expect = 2e-14
Identities = 45/85 (52%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQ 378
SPS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP+
Sbjct: 1767 SPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 1826
Query: 377 FSPSTG-YSPSQPGYSPSSTSQYTP 306
+SP+ YSPS YSP+S + YTP
Sbjct: 1827 YSPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 78.6 bits (192), Expect = 3e-13
Identities = 54/133 (40%), Positives = 60/133 (45%), Gaps = 55/133 (41%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSP----------------------------SYSPTSP--------- 465
S YSP+SPNYSPTSP YSPTSP
Sbjct: 1595 SPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFP 1654
Query: 464 -----------------SYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPG 339
+YSPSS YSP+SP S SP YSPSSP +SP S YSPS P
Sbjct: 1655 SSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPS 1714
Query: 338 YSPSSTSQYTPQT 300
YSP+S + YTP T
Sbjct: 1715 YSPTSPN-YTPAT 1726
Score = 71.6 bits (174), Expect = 3e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 366
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1832 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 65.5 bits (158), Expect = 2e-09
Identities = 38/91 (41%), Positives = 50/91 (54%), Gaps = 16/91 (17%)
Frame = -2
Query: 530 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 381
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSPSYSPTSP 1584
Query: 380 QFSPST------GYSPSQPGYSPSSTSQYTP 306
++ S+ YSPS P YSP+S P
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTSPLYAAP 1615
Score = 64.3 bits (155), Expect = 5e-09
Identities = 31/41 (75%), Positives = 36/41 (87%), Gaps = 2/41 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 423
SP+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1842 SPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
[139][TOP]
>UniRef100_Q9XZS2 DNA-directed RNA polymerase n=1 Tax=Drosophila madeirensis
RepID=Q9XZS2_DROMD
Length = 1889
Score = 104 bits (259), Expect = 5e-21
Identities = 49/79 (62%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSP+SPSYSPTSP YSPSSP+YSP+SP + +P YSP+SP +S S
Sbjct: 1681 SPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSASP 1740
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YS + ++Y+P
Sbjct: 1741 HYSPASPAYSQTG-AKYSP 1758
Score = 103 bits (258), Expect = 6e-21
Identities = 51/88 (57%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
SP + YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P+T
Sbjct: 1668 SPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATP 1727
Query: 362 GYSPSQPGYSPSSTSQYTPQTNDKDERG 279
YSP+ P YS S Y+P + + G
Sbjct: 1728 SYSPTSPNYSAS--PHYSPASPAYSQTG 1753
Score = 94.4 bits (233), Expect = 5e-18
Identities = 51/94 (54%), Positives = 63/94 (67%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSP 381
SP+SP YSP+SP+YSPTSP YSP+SPSYSP+SP Y+P++P N SP YSP+SP
Sbjct: 1688 SPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASP 1747
Query: 380 QFSPS-TGYSPSQPGYSPSSTS--------QYTP 306
+S + YSP+ P YSP S S QYTP
Sbjct: 1748 AYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 90.9 bits (224), Expect = 5e-17
Identities = 54/109 (49%), Positives = 66/109 (60%), Gaps = 31/109 (28%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSP 423
SPSSP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1709 SPSSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSP 1768
Query: 422 YNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 306
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1769 SYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 89.0 bits (219), Expect = 2e-16
Identities = 48/88 (54%), Positives = 63/88 (71%), Gaps = 7/88 (7%)
Frame = -2
Query: 539 SPSSPYSPT-SPNYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SP P SP+ SP+YSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P
Sbjct: 1566 SPFYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPN 1625
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTPQTN 297
F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1626 FNPQSTGYSPSASGYSPTS-PVYSPTSN 1652
Score = 87.0 bits (214), Expect = 8e-16
Identities = 48/100 (48%), Positives = 60/100 (60%), Gaps = 22/100 (22%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP------- 402
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 401 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 306
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 84.7 bits (208), Expect = 4e-15
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 366
SPS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867
Query: 365 TGYSPSQPGYSPSS 324
+ YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881
Score = 84.3 bits (207), Expect = 5e-15
Identities = 51/99 (51%), Positives = 63/99 (63%), Gaps = 21/99 (21%)
Frame = -2
Query: 539 SPS-SPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSPY 420
SPS S YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP
Sbjct: 1634 SPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPS 1693
Query: 419 NSGVSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SPS+ YSP+ P Y+P +T Y+P
Sbjct: 1694 YSPSSPSYSPTSPCYSPSSPSYSPTSPNYTP-ATPSYSP 1731
Score = 83.6 bits (205), Expect = 8e-15
Identities = 41/84 (48%), Positives = 58/84 (69%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 375
S S YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ SP + +P+++P S +
Sbjct: 1574 SVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGY 1633
Query: 374 SPS-TGYSPSQPGYSPSSTSQYTP 306
SPS +GYSP+ P YSP+S +P
Sbjct: 1634 SPSASGYSPTSPVYSPTSNFPSSP 1657
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/89 (55%), Positives = 60/89 (67%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP YSP SP+Y SP SP Y+P SP YSP+SP YSP+SP S SP +SPS+ Q+SP
Sbjct: 1757 SPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSP 1815
Query: 368 --------STGYSPSQPGYSPSSTSQYTP 306
S YSP+ YSPSST +Y+P
Sbjct: 1816 TGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 82.0 bits (201), Expect = 2e-14
Identities = 45/85 (52%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQ 378
SPS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP+
Sbjct: 1767 SPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 1826
Query: 377 FSPSTG-YSPSQPGYSPSSTSQYTP 306
+SP+ YSPS YSP+S + YTP
Sbjct: 1827 YSPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 78.6 bits (192), Expect = 3e-13
Identities = 54/133 (40%), Positives = 60/133 (45%), Gaps = 55/133 (41%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSP----------------------------SYSPTSP--------- 465
S YSP+SPNYSPTSP YSPTSP
Sbjct: 1595 SPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFP 1654
Query: 464 -----------------SYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPG 339
+YSPSS YSP+SP S SP YSPSSP +SP S YSPS P
Sbjct: 1655 SSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPS 1714
Query: 338 YSPSSTSQYTPQT 300
YSP+S + YTP T
Sbjct: 1715 YSPTSPN-YTPAT 1726
Score = 71.6 bits (174), Expect = 3e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 366
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1832 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 65.5 bits (158), Expect = 2e-09
Identities = 38/91 (41%), Positives = 50/91 (54%), Gaps = 16/91 (17%)
Frame = -2
Query: 530 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 381
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSPSYSPTSP 1584
Query: 380 QFSPST------GYSPSQPGYSPSSTSQYTP 306
++ S+ YSPS P YSP+S P
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTSPLYAAP 1615
Score = 64.3 bits (155), Expect = 5e-09
Identities = 31/41 (75%), Positives = 36/41 (87%), Gaps = 2/41 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 423
SP+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1842 SPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
[140][TOP]
>UniRef100_B4PY98 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4PY98_DROYA
Length = 1889
Score = 104 bits (259), Expect = 5e-21
Identities = 49/79 (62%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSP+SPSYSPTSP YSP+SP+YSP+SP + V+P YSP+SP +S S
Sbjct: 1681 SPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASP 1740
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YS + +Y+P
Sbjct: 1741 HYSPASPAYSQTGV-KYSP 1758
Score = 103 bits (257), Expect = 8e-21
Identities = 51/88 (57%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
SP + YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P T
Sbjct: 1668 SPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTP 1727
Query: 362 GYSPSQPGYSPSSTSQYTPQTNDKDERG 279
YSP+ P YS S Y+P + + G
Sbjct: 1728 SYSPTSPNYSAS--PHYSPASPAYSQTG 1753
Score = 94.7 bits (234), Expect = 4e-18
Identities = 52/94 (55%), Positives = 62/94 (65%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSP 381
SP+SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P N SP YSP+SP
Sbjct: 1688 SPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASP 1747
Query: 380 QFSPS-TGYSPSQPGYSPSSTS--------QYTP 306
+S + YSP+ P YSP S S QYTP
Sbjct: 1748 AYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 89.7 bits (221), Expect = 1e-16
Identities = 53/109 (48%), Positives = 66/109 (60%), Gaps = 31/109 (28%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSP 423
SP+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1709 SPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSP 1768
Query: 422 YNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 306
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1769 SYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 89.4 bits (220), Expect = 2e-16
Identities = 48/88 (54%), Positives = 62/88 (70%), Gaps = 7/88 (7%)
Frame = -2
Query: 539 SPSSPYSPT-SPNYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SP P SP+ SP+YSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P
Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTPN 1625
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTPQTN 297
F+P STGYSPS GYSP+S Y+P N
Sbjct: 1626 FNPQSTGYSPSSSGYSPTS-PVYSPTPN 1652
Score = 87.0 bits (214), Expect = 8e-16
Identities = 48/100 (48%), Positives = 60/100 (60%), Gaps = 22/100 (22%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP------- 402
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 401 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 306
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 84.7 bits (208), Expect = 4e-15
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 375
S S YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ +SP + +P+++P S +
Sbjct: 1574 SVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTPNFNPQSTGY 1633
Query: 374 SP-STGYSPSQPGYSPSSTSQYTP 306
SP S+GYSP+ P YSP+ Q +P
Sbjct: 1634 SPSSSGYSPTSPVYSPTPNFQSSP 1657
Score = 84.7 bits (208), Expect = 4e-15
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 366
SPS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867
Query: 365 TGYSPSQPGYSPSS 324
+ YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/96 (51%), Positives = 59/96 (61%), Gaps = 20/96 (20%)
Frame = -2
Query: 533 SSPYSPTSPNYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSPYNSG 411
SS YSPTSP YSPT SPS YSP+S +YSP+SP+YSP+SP S
Sbjct: 1637 SSGYSPTSPVYSPTPNFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSP 1696
Query: 410 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
SP YSP+SP +SP S YSP+ P Y+P T Y+P
Sbjct: 1697 SSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 1731
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/89 (55%), Positives = 60/89 (67%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP YSP SP+Y SP SP Y+P SP YSP+SP YSP+SP S SP +SPS+ Q+SP
Sbjct: 1757 SPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSP 1815
Query: 368 --------STGYSPSQPGYSPSSTSQYTP 306
S YSP+ YSPSST +Y+P
Sbjct: 1816 TGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 82.0 bits (201), Expect = 2e-14
Identities = 45/85 (52%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQ 378
SPS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP+
Sbjct: 1767 SPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 1826
Query: 377 FSPSTG-YSPSQPGYSPSSTSQYTP 306
+SP+ YSPS YSP+S + YTP
Sbjct: 1827 YSPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 77.4 bits (189), Expect = 6e-13
Identities = 50/97 (51%), Positives = 59/97 (60%), Gaps = 19/97 (19%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPT-----SPSYSPS-----SP--TYSPSSPYNSGVSPDYSP 390
S+ YSP+S YSPTSP YSPT SPS++ S SP YSPSS S SP YSP
Sbjct: 1630 STGYSPSSSGYSPTSPVYSPTPNFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSP 1689
Query: 389 SSPQFSPST-GYSPSQPGYSPSSTS------QYTPQT 300
+SP +SPS+ YSP+ P YSP+S S YTP T
Sbjct: 1690 TSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1726
Score = 71.6 bits (174), Expect = 3e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 366
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1832 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 65.1 bits (157), Expect = 3e-09
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 16/85 (18%)
Frame = -2
Query: 530 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 381
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSP 1584
Query: 380 QFSPST------GYSPSQPGYSPSS 324
++ S+ YSPS P YSP+S
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTS 1609
Score = 64.3 bits (155), Expect = 5e-09
Identities = 31/41 (75%), Positives = 36/41 (87%), Gaps = 2/41 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 423
SP+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1842 SPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
[141][TOP]
>UniRef100_B3NUC1 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3NUC1_DROER
Length = 1889
Score = 104 bits (259), Expect = 5e-21
Identities = 49/79 (62%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSP+SPSYSPTSP YSP+SP+YSP+SP + V+P YSP+SP +S S
Sbjct: 1681 SPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASP 1740
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YS + +Y+P
Sbjct: 1741 HYSPASPAYSQTGV-KYSP 1758
Score = 103 bits (258), Expect = 6e-21
Identities = 51/88 (57%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
SP++ YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P T
Sbjct: 1668 SPANAYSPSSANYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTP 1727
Query: 362 GYSPSQPGYSPSSTSQYTPQTNDKDERG 279
YSP+ P YS S Y+P + + G
Sbjct: 1728 SYSPTSPNYSAS--PHYSPASPAYSQTG 1753
Score = 94.7 bits (234), Expect = 4e-18
Identities = 52/94 (55%), Positives = 62/94 (65%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSP 381
SP+SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P N SP YSP+SP
Sbjct: 1688 SPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASP 1747
Query: 380 QFSPS-TGYSPSQPGYSPSSTS--------QYTP 306
+S + YSP+ P YSP S S QYTP
Sbjct: 1748 AYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 89.7 bits (221), Expect = 1e-16
Identities = 53/109 (48%), Positives = 66/109 (60%), Gaps = 31/109 (28%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSP 423
SP+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1709 SPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSP 1768
Query: 422 YNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 306
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1769 SYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 87.8 bits (216), Expect = 4e-16
Identities = 45/79 (56%), Positives = 58/79 (73%), Gaps = 7/79 (8%)
Frame = -2
Query: 539 SPSSPYSPT-SPNYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SP P SP+ SP+YSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P
Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTPN 1625
Query: 377 FSP-STGYSPSQPGYSPSS 324
F+P STGYSPS GYSP+S
Sbjct: 1626 FNPQSTGYSPSSSGYSPTS 1644
Score = 87.0 bits (214), Expect = 8e-16
Identities = 48/100 (48%), Positives = 60/100 (60%), Gaps = 22/100 (22%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP------- 402
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 401 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 306
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 84.7 bits (208), Expect = 4e-15
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 366
SPS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867
Query: 365 TGYSPSQPGYSPSS 324
+ YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881
Score = 84.0 bits (206), Expect = 6e-15
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 375
S S YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ +SP + +P+++P S +
Sbjct: 1574 SVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTPNFNPQSTGY 1633
Query: 374 SP-STGYSPSQPGYSPSSTSQYTP 306
SP S+GYSP+ P YSP+ Q +P
Sbjct: 1634 SPSSSGYSPTSPVYSPTPHFQSSP 1657
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/96 (51%), Positives = 59/96 (61%), Gaps = 20/96 (20%)
Frame = -2
Query: 533 SSPYSPTSPNYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSPYNSG 411
SS YSPTSP YSPT SPS YSP+S +YSP+SP+YSP+SP S
Sbjct: 1637 SSGYSPTSPVYSPTPHFQSSPSFAGSGSNIYSPANAYSPSSANYSPNSPSYSPTSPSYSP 1696
Query: 410 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
SP YSP+SP +SP S YSP+ P Y+P T Y+P
Sbjct: 1697 SSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 1731
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/89 (55%), Positives = 60/89 (67%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP YSP SP+Y SP SP Y+P SP YSP+SP YSP+SP S SP +SPS+ Q+SP
Sbjct: 1757 SPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSP 1815
Query: 368 --------STGYSPSQPGYSPSSTSQYTP 306
S YSP+ YSPSST +Y+P
Sbjct: 1816 TGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 82.0 bits (201), Expect = 2e-14
Identities = 45/85 (52%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQ 378
SPS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP+
Sbjct: 1767 SPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 1826
Query: 377 FSPSTG-YSPSQPGYSPSSTSQYTP 306
+SP+ YSPS YSP+S + YTP
Sbjct: 1827 YSPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 77.8 bits (190), Expect = 5e-13
Identities = 50/98 (51%), Positives = 59/98 (60%), Gaps = 20/98 (20%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPT-----SPS--------YSPSSPTYSPSSPYNSGVSPDYS 393
S+ YSP+S YSPTSP YSPT SPS YSP++ YSPSS S SP YS
Sbjct: 1630 STGYSPSSSGYSPTSPVYSPTPHFQSSPSFAGSGSNIYSPAN-AYSPSSANYSPNSPSYS 1688
Query: 392 PSSPQFSPST-GYSPSQPGYSPSSTS------QYTPQT 300
P+SP +SPS+ YSP+ P YSP+S S YTP T
Sbjct: 1689 PTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1726
Score = 71.6 bits (174), Expect = 3e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 366
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1832 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 65.1 bits (157), Expect = 3e-09
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 16/85 (18%)
Frame = -2
Query: 530 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 381
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSP 1584
Query: 380 QFSPST------GYSPSQPGYSPSS 324
++ S+ YSPS P YSP+S
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTS 1609
Score = 64.3 bits (155), Expect = 5e-09
Identities = 31/41 (75%), Positives = 36/41 (87%), Gaps = 2/41 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 423
SP+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1842 SPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
[142][TOP]
>UniRef100_B3MQ29 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3MQ29_DROAN
Length = 1889
Score = 104 bits (259), Expect = 5e-21
Identities = 49/79 (62%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP+YSP+SPSYSPTSP YSP+SP+YSP+SP + V+P YSP+SP +S S
Sbjct: 1681 SPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASP 1740
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YS + +Y+P
Sbjct: 1741 HYSPASPAYSQTGV-KYSP 1758
Score = 103 bits (257), Expect = 8e-21
Identities = 51/88 (57%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
SP + YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P T
Sbjct: 1668 SPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTP 1727
Query: 362 GYSPSQPGYSPSSTSQYTPQTNDKDERG 279
YSP+ P YS S Y+P + + G
Sbjct: 1728 SYSPTSPNYSAS--PHYSPASPAYSQTG 1753
Score = 94.7 bits (234), Expect = 4e-18
Identities = 52/94 (55%), Positives = 62/94 (65%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSP 381
SP+SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P N SP YSP+SP
Sbjct: 1688 SPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASP 1747
Query: 380 QFSPS-TGYSPSQPGYSPSSTS--------QYTP 306
+S + YSP+ P YSP S S QYTP
Sbjct: 1748 AYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 89.7 bits (221), Expect = 1e-16
Identities = 53/109 (48%), Positives = 66/109 (60%), Gaps = 31/109 (28%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSP 423
SP+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1709 SPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSP 1768
Query: 422 YNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 306
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1769 SYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 89.4 bits (220), Expect = 2e-16
Identities = 48/88 (54%), Positives = 63/88 (71%), Gaps = 7/88 (7%)
Frame = -2
Query: 539 SPSSPYSPT-SPNYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SP P SP+ SP+YSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P
Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYATTSPRYASTTPN 1625
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTPQTN 297
F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1626 FNPQSTGYSPSSSGYSPTS-PVYSPTSN 1652
Score = 87.0 bits (214), Expect = 8e-16
Identities = 48/100 (48%), Positives = 60/100 (60%), Gaps = 22/100 (22%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP------- 402
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 401 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 306
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 86.7 bits (213), Expect = 1e-15
Identities = 42/84 (50%), Positives = 60/84 (71%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 375
S S YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ +SP + +P+++P S +
Sbjct: 1574 SVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYATTSPRYASTTPNFNPQSTGY 1633
Query: 374 SP-STGYSPSQPGYSPSSTSQYTP 306
SP S+GYSP+ P YSP+S Q +P
Sbjct: 1634 SPSSSGYSPTSPVYSPTSNYQSSP 1657
Score = 84.7 bits (208), Expect = 4e-15
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 366
SPS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867
Query: 365 TGYSPSQPGYSPSS 324
+ YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/96 (51%), Positives = 59/96 (61%), Gaps = 20/96 (20%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSPYNSG 411
SS YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP S
Sbjct: 1637 SSGYSPTSPVYSPTSNYQSSPSFAGSGSNMYSPGNAYSPSSSNYSPNSPSYSPTSPSYSP 1696
Query: 410 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
SP YSP+SP +SP S YSP+ P Y+P T Y+P
Sbjct: 1697 SSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 1731
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/89 (55%), Positives = 60/89 (67%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP YSP SP+Y SP SP Y+P SP YSP+SP YSP+SP S SP +SPS+ Q+SP
Sbjct: 1757 SPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSP 1815
Query: 368 --------STGYSPSQPGYSPSSTSQYTP 306
S YSP+ YSPSST +Y+P
Sbjct: 1816 TGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 82.0 bits (201), Expect = 2e-14
Identities = 45/85 (52%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQ 378
SPS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP+
Sbjct: 1767 SPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 1826
Query: 377 FSPSTG-YSPSQPGYSPSSTSQYTP 306
+SP+ YSPS YSP+S + YTP
Sbjct: 1827 YSPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 80.1 bits (196), Expect = 9e-14
Identities = 58/129 (44%), Positives = 63/129 (48%), Gaps = 49/129 (37%)
Frame = -2
Query: 539 SPSSP-YSPTSP----------------------------NYSPTSPSYSPT-----SPS 462
SPSSP YSPTSP YSPTSP YSPT SPS
Sbjct: 1599 SPSSPNYSPTSPLYATTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSNYQSSPS 1658
Query: 461 --------------YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPS 327
YSPSS YSP+SP S SP YSPSSP +SP S YSP+ P YSP+
Sbjct: 1659 FAGSGSNMYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPT 1718
Query: 326 STSQYTPQT 300
S + YTP T
Sbjct: 1719 SPN-YTPVT 1726
Score = 78.2 bits (191), Expect = 3e-13
Identities = 36/76 (47%), Positives = 52/76 (68%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYS 354
S YSP+SPNYSPTSP Y+ TSP Y+ ++P ++P S S S YSP+SP +SP++ Y
Sbjct: 1595 SPNYSPSSPNYSPTSPLYATTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSNYQ 1654
Query: 353 PSQPGYSPSSTSQYTP 306
S P ++ S ++ Y+P
Sbjct: 1655 -SSPSFAGSGSNMYSP 1669
Score = 71.6 bits (174), Expect = 3e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 366
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1832 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 65.1 bits (157), Expect = 3e-09
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 16/85 (18%)
Frame = -2
Query: 530 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 381
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSP 1584
Query: 380 QFSPST------GYSPSQPGYSPSS 324
++ S+ YSPS P YSP+S
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTS 1609
Score = 64.3 bits (155), Expect = 5e-09
Identities = 31/41 (75%), Positives = 36/41 (87%), Gaps = 2/41 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 423
SP+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1842 SPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
[143][TOP]
>UniRef100_B4NDK9 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4NDK9_DROWI
Length = 1890
Score = 103 bits (256), Expect = 1e-20
Identities = 48/79 (60%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
+P+SP YSPTSP+YSP+SPSYSPTSP YSP+SP+YSP+SP + V+P YSP+SP +S S
Sbjct: 1682 TPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASP 1741
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YS + +Y+P
Sbjct: 1742 HYSPASPAYSQTGV-KYSP 1759
Score = 102 bits (254), Expect = 2e-20
Identities = 50/88 (56%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
SP + YSP+S NY+P SPSYSPTSPSYSPSSP+YSP+SP S SP YSP+SP ++P T
Sbjct: 1669 SPGNAYSPSSSNYTPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTP 1728
Query: 362 GYSPSQPGYSPSSTSQYTPQTNDKDERG 279
YSP+ P YS S Y+P + + G
Sbjct: 1729 SYSPTSPNYSAS--PHYSPASPAYSQTG 1754
Score = 94.7 bits (234), Expect = 4e-18
Identities = 52/94 (55%), Positives = 62/94 (65%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSP 381
SP+SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P N SP YSP+SP
Sbjct: 1689 SPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASP 1748
Query: 380 QFSPS-TGYSPSQPGYSPSSTS--------QYTP 306
+S + YSP+ P YSP S S QYTP
Sbjct: 1749 AYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1782
Score = 89.7 bits (221), Expect = 1e-16
Identities = 53/109 (48%), Positives = 66/109 (60%), Gaps = 31/109 (28%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSP 423
SP+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1710 SPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSP 1769
Query: 422 YNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 306
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1770 SYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1816
Score = 87.0 bits (214), Expect = 8e-16
Identities = 48/100 (48%), Positives = 60/100 (60%), Gaps = 22/100 (22%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP------- 402
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1774 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1833
Query: 401 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 306
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1834 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1873
Score = 84.7 bits (208), Expect = 4e-15
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 366
SPS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+
Sbjct: 1809 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1868
Query: 365 TGYSPSQPGYSPSS 324
+ YSP+ P YSPSS
Sbjct: 1869 SHYSPTSPAYSPSS 1882
Score = 83.6 bits (205), Expect = 8e-15
Identities = 42/85 (49%), Positives = 59/85 (69%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPS------YSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
S S YSPTSPNY+ +SPS YSP+SP+YSP+SP Y+ +SP + +P+++ S
Sbjct: 1574 SVSPSYSPTSPNYTASSPSGGASPNYSPSSPNYSPTSPLYAATSPRYASTTPNFNLQSTG 1633
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTP 306
+SP S+GYSP+ P YSP+S Q +P
Sbjct: 1634 YSPSSSGYSPTSPVYSPTSNFQSSP 1658
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 58/92 (63%), Gaps = 14/92 (15%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPT-------------SPSYSPSSPTYSPSSPYNSGVSPDYSP 390
SPY PTSP+ SPSYSPT SP+YSPSSP YSP+SP + SP Y+
Sbjct: 1566 SPYFPTSPS---VSPSYSPTSPNYTASSPSGGASPNYSPSSPNYSPTSPLYAATSPRYAS 1622
Query: 389 SSPQFS-PSTGYSPSQPGYSPSSTSQYTPQTN 297
++P F+ STGYSPS GYSP+S Y+P +N
Sbjct: 1623 TTPNFNLQSTGYSPSSSGYSPTS-PVYSPTSN 1653
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/89 (55%), Positives = 60/89 (67%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP YSP SP+Y SP SP Y+P SP YSP+SP YSP+SP S SP +SPS+ Q+SP
Sbjct: 1758 SPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSP 1816
Query: 368 --------STGYSPSQPGYSPSSTSQYTP 306
S YSP+ YSPSST +Y+P
Sbjct: 1817 TGSTYSATSPRYSPNMSIYSPSST-KYSP 1844
Score = 82.0 bits (201), Expect = 2e-14
Identities = 45/85 (52%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQ 378
SPS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP+
Sbjct: 1768 SPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 1827
Query: 377 FSPSTG-YSPSQPGYSPSSTSQYTP 306
+SP+ YSPS YSP+S + YTP
Sbjct: 1828 YSPNMSIYSPSSTKYSPTSPT-YTP 1851
Score = 81.6 bits (200), Expect = 3e-14
Identities = 48/96 (50%), Positives = 59/96 (61%), Gaps = 20/96 (20%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSPYNSG 411
SS YSPTSP YSPTS PS YSP+S +Y+P+SP+YSP+SP S
Sbjct: 1638 SSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYTPNSPSYSPTSPSYSP 1697
Query: 410 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
SP YSP+SP +SP S YSP+ P Y+P T Y+P
Sbjct: 1698 SSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 1732
Score = 78.2 bits (191), Expect = 3e-13
Identities = 54/129 (41%), Positives = 62/129 (48%), Gaps = 49/129 (37%)
Frame = -2
Query: 539 SPSSP-YSPTSP---------------------NYSPTSPSYSPTSP------------- 465
SPSSP YSPTSP YSP+S YSPTSP
Sbjct: 1600 SPSSPNYSPTSPLYAATSPRYASTTPNFNLQSTGYSPSSSGYSPTSPVYSPTSNFQSSPS 1659
Query: 464 -------------SYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPS 327
+YSPSS Y+P+SP S SP YSPSSP +SP S YSP+ P YSP+
Sbjct: 1660 FAGSGSNMYSPGNAYSPSSSNYTPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPT 1719
Query: 326 STSQYTPQT 300
S + YTP T
Sbjct: 1720 SPN-YTPVT 1727
Score = 71.6 bits (174), Expect = 3e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 366
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1833 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1888
Score = 65.9 bits (159), Expect = 2e-09
Identities = 40/87 (45%), Positives = 50/87 (57%), Gaps = 17/87 (19%)
Frame = -2
Query: 533 SSPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSS 384
+S +P P++SP SPS+SP P SPSSP + SP P + VSP YSP+S
Sbjct: 1524 ASSMTPGGPSFSPAAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPTSPSVSPSYSPTS 1583
Query: 383 PQF---SPSTG----YSPSQPGYSPSS 324
P + SPS G YSPS P YSP+S
Sbjct: 1584 PNYTASSPSGGASPNYSPSSPNYSPTS 1610
Score = 64.3 bits (155), Expect = 5e-09
Identities = 31/41 (75%), Positives = 36/41 (87%), Gaps = 2/41 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 423
SP+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1843 SPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1883
[144][TOP]
>UniRef100_Q5EXZ8 RNA polymerase II largest subunit (Fragment) n=1 Tax=Periplaneta
americana RepID=Q5EXZ8_PERAM
Length = 97
Score = 102 bits (255), Expect = 1e-20
Identities = 48/73 (65%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
S S+ YSP+SP+YSPTSP+YSPTSP YSPSS YSP+SP + SP+YSPSSP +SP+
Sbjct: 18 SASTRYSPSSPSYSPTSPTYSPTSPQYSPSSSKYSPTSPTYTPTSPNYSPSSPTYSPAVP 77
Query: 362 GYSPSQPGYSPSS 324
GYSP+ P YSP+S
Sbjct: 78 GYSPTSPTYSPTS 90
Score = 97.4 bits (241), Expect = 6e-19
Identities = 52/88 (59%), Positives = 65/88 (73%), Gaps = 10/88 (11%)
Frame = -2
Query: 539 SPSSP-YSPTSP--------NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 387
SP+SP YSP+SP YSP+SPSYSPTSP+YSP+SP YSPSS S SP Y+P+
Sbjct: 2 SPTSPSYSPSSPQHTPSASTRYSPSSPSYSPTSPTYSPTSPQYSPSSSKYSPTSPTYTPT 61
Query: 386 SPQFSPST-GYSPSQPGYSPSSTSQYTP 306
SP +SPS+ YSP+ PGYSP+S + Y+P
Sbjct: 62 SPNYSPSSPTYSPAVPGYSPTSPT-YSP 88
Score = 84.0 bits (206), Expect = 6e-15
Identities = 42/70 (60%), Positives = 55/70 (78%), Gaps = 2/70 (2%)
Frame = -2
Query: 503 YSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSGVSPDYSPSSPQFSPSTG-YSPSQPGYSP 330
YSPTSPSYSP+SP ++PS+ T YSPSSP S SP YSP+SPQ+SPS+ YSP+ P Y+P
Sbjct: 1 YSPTSPSYSPSSPQHTPSASTRYSPSSPSYSPTSPTYSPTSPQYSPSSSKYSPTSPTYTP 60
Query: 329 SSTSQYTPQT 300
+S + Y+P +
Sbjct: 61 TSPN-YSPSS 69
Score = 82.0 bits (201), Expect = 2e-14
Identities = 38/56 (67%), Positives = 46/56 (82%), Gaps = 1/56 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 375
SP+SP YSP+S YSPTSP+Y+PTSP+YSPSSPTYSP+ P S SP YSP+SP +
Sbjct: 38 SPTSPQYSPSSSKYSPTSPTYTPTSPNYSPSSPTYSPAVPGYSPTSPTYSPTSPAY 93
[145][TOP]
>UniRef100_C6F0A2 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0A2_PLAFA
Length = 223
Score = 102 bits (255), Expect = 1e-20
Identities = 50/77 (64%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 44 SPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 103
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S +Y+P
Sbjct: 104 SPTSPKYSPTS-PKYSP 119
Score = 99.0 bits (245), Expect = 2e-19
Identities = 49/77 (63%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 37 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 96
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S +Y+P
Sbjct: 97 SPTSPKYSPTS-PKYSP 112
Score = 96.7 bits (239), Expect = 9e-19
Identities = 47/75 (62%), Positives = 57/75 (76%), Gaps = 3/75 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP++
Sbjct: 62 SPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 121
Query: 362 --GYSPSQPGYSPSS 324
+ + P YSP S
Sbjct: 122 PVAQNIASPNYSPYS 136
Score = 92.0 bits (227), Expect = 2e-17
Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
+S Y+ SP YS TSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 30 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 89
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S +Y+P
Sbjct: 90 SPTSPKYSPTS-PKYSP 105
Score = 88.6 bits (218), Expect = 3e-16
Identities = 49/87 (56%), Positives = 59/87 (67%), Gaps = 9/87 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP YSPTSP YSPTSP YSPTSP YS P+SP YSP+SP S SP YSP+S
Sbjct: 48 SPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 107
Query: 383 PQFSP-STGYSPSQPGYSPSSTSQYTP 306
P++SP S YSP+ P ++ Y+P
Sbjct: 108 PKYSPTSPKYSPTSPVAQNIASPNYSP 134
Score = 76.3 bits (186), Expect = 1e-12
Identities = 46/97 (47%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGVSPDY 396
SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YS +SP S SP Y
Sbjct: 90 SPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAY 149
Query: 395 SPSSPQFSPS---TGYSPSQPGYSPSSTSQYTPQTND 294
S SSP + S + P P Y S Q D
Sbjct: 150 SISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 186
[146][TOP]
>UniRef100_B4JXA6 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4JXA6_DROGR
Length = 1889
Score = 102 bits (255), Expect = 1e-20
Identities = 48/79 (60%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSP SP+YSP+SPSYSPTSP YSP+SP+YSP+SP + V+P YSP+SP +S S
Sbjct: 1681 SPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVTPSYSPTSPNYSASP 1740
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YS + +Y+P
Sbjct: 1741 HYSPASPAYSQTGV-KYSP 1758
Score = 98.6 bits (244), Expect = 2e-19
Identities = 49/88 (55%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
SP + YSP+S NYSP SPSYSP SPSYSPSSP+YSP+SP S SP YSP+SP+++ T
Sbjct: 1668 SPGNAYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVTP 1727
Query: 362 GYSPSQPGYSPSSTSQYTPQTNDKDERG 279
YSP+ P YS S Y+P + + G
Sbjct: 1728 SYSPTSPNYSAS--PHYSPASPAYSQTG 1753
Score = 93.6 bits (231), Expect = 8e-18
Identities = 54/95 (56%), Positives = 63/95 (66%), Gaps = 17/95 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSS-------PTYSPSSPYNSGVSPDYSPSS 384
SP SP YSP+SP+YSPTSP YSPTSPSYSP+S P+YSP+SP N SP YSP+S
Sbjct: 1688 SPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVTPSYSPTSP-NYSASPHYSPAS 1746
Query: 383 PQFSPS-TGYSPSQPGYSPSSTS--------QYTP 306
P +S + YSP+ P YSP S S QYTP
Sbjct: 1747 PAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 87.0 bits (214), Expect = 8e-16
Identities = 47/88 (53%), Positives = 62/88 (70%), Gaps = 7/88 (7%)
Frame = -2
Query: 539 SPSSPYSPT-SPNYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SP P SP+ SP+YSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P
Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYTATSPRYASATPN 1625
Query: 377 F-SPSTGYSPSQPGYSPSSTSQYTPQTN 297
F + STGYSPS GYSP+S Y+P +N
Sbjct: 1626 FNAQSTGYSPSSSGYSPTS-PVYSPTSN 1652
Score = 87.0 bits (214), Expect = 8e-16
Identities = 48/88 (54%), Positives = 60/88 (68%), Gaps = 10/88 (11%)
Frame = -2
Query: 539 SPSSP-------YSPTSPNYSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGVSPDYSPS 387
SP+SP YSP SP YS T YSPTSP+YSP SP+Y SP SP + SP YSP+
Sbjct: 1730 SPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPA 1789
Query: 386 SPQFSPSTG-YSPSQPGYSPSSTSQYTP 306
SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1790 SPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 87.0 bits (214), Expect = 8e-16
Identities = 48/100 (48%), Positives = 60/100 (60%), Gaps = 22/100 (22%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP------- 402
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 401 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 306
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 84.7 bits (208), Expect = 4e-15
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 366
SPS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867
Query: 365 TGYSPSQPGYSPSS 324
+ YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881
Score = 83.6 bits (205), Expect = 8e-15
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 375
S S YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ +SP + +P+++ S +
Sbjct: 1574 SVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYTATSPRYASATPNFNAQSTGY 1633
Query: 374 SP-STGYSPSQPGYSPSSTSQYTP 306
SP S+GYSP+ P YSP+S Q +P
Sbjct: 1634 SPSSSGYSPTSPVYSPTSNFQSSP 1657
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/89 (55%), Positives = 60/89 (67%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP YSP SP+Y SP SP Y+P SP YSP+SP YSP+SP S SP +SPS+ Q+SP
Sbjct: 1757 SPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSP 1815
Query: 368 --------STGYSPSQPGYSPSSTSQYTP 306
S YSP+ YSPSST +Y+P
Sbjct: 1816 TGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 82.0 bits (201), Expect = 2e-14
Identities = 45/85 (52%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQ 378
SPS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP+
Sbjct: 1767 SPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 1826
Query: 377 FSPSTG-YSPSQPGYSPSSTSQYTP 306
+SP+ YSPS YSP+S + YTP
Sbjct: 1827 YSPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 79.0 bits (193), Expect = 2e-13
Identities = 48/96 (50%), Positives = 58/96 (60%), Gaps = 20/96 (20%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSPYNSG 411
SS YSPTSP YSPTS PS YSP+S +YSP+SP+YSP SP S
Sbjct: 1637 SSGYSPTSPVYSPTSNFQSSPSFAGSGSNLYSPGNAYSPSSSNYSPNSPSYSPMSPSYSP 1696
Query: 410 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
SP YSP+SP +SP S YSP+ P Y+ + T Y+P
Sbjct: 1697 SSPSYSPTSPCYSPTSPSYSPTSPKYT-AVTPSYSP 1731
Score = 75.9 bits (185), Expect = 2e-12
Identities = 47/98 (47%), Positives = 55/98 (56%), Gaps = 20/98 (20%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPT-------YSPSSPYNSGVSPDYSP----- 390
S YSP+SPNYSPTSP Y+ TSP Y+ ++P YSPSS S SP YSP
Sbjct: 1595 SPNYSPSSPNYSPTSPLYTATSPRYASATPNFNAQSTGYSPSSSGYSPTSPVYSPTSNFQ 1654
Query: 389 SSPQF--------SPSTGYSPSQPGYSPSSTSQYTPQT 300
SSP F SP YSPS YSP+S S Y+P +
Sbjct: 1655 SSPSFAGSGSNLYSPGNAYSPSSSNYSPNSPS-YSPMS 1691
Score = 71.6 bits (174), Expect = 3e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 366
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1832 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 65.1 bits (157), Expect = 3e-09
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 16/85 (18%)
Frame = -2
Query: 530 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 381
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSP 1584
Query: 380 QFSPST------GYSPSQPGYSPSS 324
++ S+ YSPS P YSP+S
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTS 1609
Score = 64.3 bits (155), Expect = 5e-09
Identities = 31/41 (75%), Positives = 36/41 (87%), Gaps = 2/41 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 423
SP+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1842 SPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
[147][TOP]
>UniRef100_C6F1E9 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1E9_PLAVI
Length = 225
Score = 102 bits (253), Expect = 2e-20
Identities = 50/73 (68%), Positives = 57/73 (78%), Gaps = 3/73 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SPS+
Sbjct: 64 SPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSS 123
Query: 362 GY--SPSQPGYSP 330
+PS P YSP
Sbjct: 124 PVPNNPSSPHYSP 136
Score = 99.8 bits (247), Expect = 1e-19
Identities = 49/79 (62%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 112
Query: 356 SPSQPGYSPSSTSQYTPQT 300
SP+ P YSPSS P +
Sbjct: 113 SPTSPQYSPSSPVPNNPSS 131
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/77 (62%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 60 SPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQY 119
Query: 356 SPSQPGYSPSSTSQYTP 306
SPS P + S+ Y+P
Sbjct: 120 SPSSPVPNNPSSPHYSP 136
Score = 92.0 bits (227), Expect = 2e-17
Identities = 46/76 (60%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 348
+S SP YS TSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S YSP+
Sbjct: 49 HSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 108
Query: 347 QPGYSPSSTSQYTPQT 300
P YSP+S QY+P +
Sbjct: 109 SPKYSPTS-PQYSPSS 123
Score = 57.0 bits (136), Expect = 8e-07
Identities = 44/118 (37%), Positives = 52/118 (44%), Gaps = 29/118 (24%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSP-------------------------SSPTY 438
SP+SP YSPTSP YSPTSP YSPTSP YSP +SP Y
Sbjct: 92 SPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSPYAIASPKFSPTSPAY 151
Query: 437 SPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP--QTNDKDERGKD 273
S SSP S S SP+ SP Q S ++P Q N ++ + D
Sbjct: 152 SISSPVYDQSGNARSKSQHPLSPAYILQSPVQVKQHIQDVSVFSPIQQANAEEVQNDD 209
[148][TOP]
>UniRef100_B4L732 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4L732_DROMO
Length = 1889
Score = 102 bits (253), Expect = 2e-20
Identities = 48/79 (60%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSP SP+YSP+SPSYSPTSP YSP+SP+YSP+SP + V+P YSP+SP +S S
Sbjct: 1681 SPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASP 1740
Query: 362 GYSPSQPGYSPSSTSQYTP 306
YSP+ P YS + +Y+P
Sbjct: 1741 HYSPASPAYSQTGV-KYSP 1758
Score = 101 bits (251), Expect = 4e-20
Identities = 50/88 (56%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
SP + YSP+S NYSP SPSYSP SPSYSPSSP+YSP+SP S SP YSP+SP ++P T
Sbjct: 1668 SPGNAYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTP 1727
Query: 362 GYSPSQPGYSPSSTSQYTPQTNDKDERG 279
YSP+ P YS S Y+P + + G
Sbjct: 1728 SYSPTSPNYSAS--PHYSPASPAYSQTG 1753
Score = 94.0 bits (232), Expect = 6e-18
Identities = 52/94 (55%), Positives = 61/94 (64%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSP 381
SP SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P N SP YSP+SP
Sbjct: 1688 SPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASP 1747
Query: 380 QFSPS-TGYSPSQPGYSPSSTS--------QYTP 306
+S + YSP+ P YSP S S QYTP
Sbjct: 1748 AYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 90.1 bits (222), Expect = 9e-17
Identities = 48/88 (54%), Positives = 63/88 (71%), Gaps = 7/88 (7%)
Frame = -2
Query: 539 SPSSPYSPT-SPNYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SP P SP+ SP+YSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P
Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASTSPRYASTTPN 1625
Query: 377 FSP-STGYSPSQPGYSPSSTSQYTPQTN 297
F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1626 FNPQSTGYSPSSSGYSPTS-PVYSPTSN 1652
Score = 89.7 bits (221), Expect = 1e-16
Identities = 53/109 (48%), Positives = 66/109 (60%), Gaps = 31/109 (28%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSP 423
SP+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1709 SPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSP 1768
Query: 422 YNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 306
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1769 SYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 87.0 bits (214), Expect = 8e-16
Identities = 48/100 (48%), Positives = 60/100 (60%), Gaps = 22/100 (22%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP------- 402
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 401 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 306
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 86.7 bits (213), Expect = 1e-15
Identities = 42/84 (50%), Positives = 60/84 (71%), Gaps = 6/84 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 375
S S YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ +SP + +P+++P S +
Sbjct: 1574 SVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASTSPRYASTTPNFNPQSTGY 1633
Query: 374 SP-STGYSPSQPGYSPSSTSQYTP 306
SP S+GYSP+ P YSP+S Q +P
Sbjct: 1634 SPSSSGYSPTSPVYSPTSNFQSSP 1657
Score = 84.7 bits (208), Expect = 4e-15
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 366
SPS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867
Query: 365 TGYSPSQPGYSPSS 324
+ YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/96 (51%), Positives = 58/96 (60%), Gaps = 20/96 (20%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSPYNSG 411
SS YSPTSP YSPTS PS YSP+S +YSP+SP+YSP SP S
Sbjct: 1637 SSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYSPNSPSYSPMSPSYSP 1696
Query: 410 VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
SP YSP+SP +SP S YSP+ P Y+P T Y+P
Sbjct: 1697 SSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 1731
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/89 (55%), Positives = 60/89 (67%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP YSP SP+Y SP SP Y+P SP YSP+SP YSP+SP S SP +SPS+ Q+SP
Sbjct: 1757 SPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSP 1815
Query: 368 --------STGYSPSQPGYSPSSTSQYTP 306
S YSP+ YSPSST +Y+P
Sbjct: 1816 TGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 82.0 bits (201), Expect = 2e-14
Identities = 45/85 (52%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQ 378
SPS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S YS +SP+
Sbjct: 1767 SPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 1826
Query: 377 FSPSTG-YSPSQPGYSPSSTSQYTP 306
+SP+ YSPS YSP+S + YTP
Sbjct: 1827 YSPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 77.4 bits (189), Expect = 6e-13
Identities = 53/133 (39%), Positives = 61/133 (45%), Gaps = 55/133 (41%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSP----------------------------SYSPTSP--------- 465
S YSP+SPNYSPTSP YSPTSP
Sbjct: 1595 SPNYSPSSPNYSPTSPLYASTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSNFQ 1654
Query: 464 -----------------SYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPG 339
+YSPSS YSP+SP S +SP YSPSSP +SP S YSP+ P
Sbjct: 1655 SSPSFAGSGSNMYSPGNAYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPS 1714
Query: 338 YSPSSTSQYTPQT 300
YSP+S + YTP T
Sbjct: 1715 YSPTSPN-YTPVT 1726
Score = 71.6 bits (174), Expect = 3e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 366
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1832 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 65.5 bits (158), Expect = 2e-09
Identities = 40/91 (43%), Positives = 52/91 (57%), Gaps = 19/91 (20%)
Frame = -2
Query: 539 SPS---SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPD 399
SPS S +P P++SP+ SPS+SP P SPSSP + SP P + VSP
Sbjct: 1519 SPSGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPS 1578
Query: 398 YSPSSPQFSPST------GYSPSQPGYSPSS 324
YSP+SP ++ S+ YSPS P YSP+S
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1609
Score = 64.3 bits (155), Expect = 5e-09
Identities = 31/41 (75%), Positives = 36/41 (87%), Gaps = 2/41 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 423
SP+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1842 SPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
[149][TOP]
>UniRef100_O77165 DNA-directed RNA polymerase (Fragment) n=1 Tax=Breviata anathema
RepID=O77165_9EUKA
Length = 1690
Score = 101 bits (251), Expect = 4e-20
Identities = 50/80 (62%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP SP YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1507 SPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPAS 1566
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1567 PAYSPASPAYSPASPA-YSP 1585
Score = 101 bits (251), Expect = 4e-20
Identities = 50/80 (62%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP SP YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1528 SPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPAS 1587
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1588 PAYSPASPAYSPASPA-YSP 1606
Score = 101 bits (251), Expect = 4e-20
Identities = 50/80 (62%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP SP YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1549 SPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPAS 1608
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1609 PAYSPASPAYSPASPA-YSP 1627
Score = 101 bits (251), Expect = 4e-20
Identities = 50/80 (62%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP SP YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1570 SPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPAS 1629
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y+P
Sbjct: 1630 PAYSPASPAYSPASPA-YSP 1648
Score = 99.8 bits (247), Expect = 1e-19
Identities = 49/80 (61%), Positives = 60/80 (75%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP SP YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP S
Sbjct: 1591 SPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPAS 1650
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y P+ P YSP+S + Y+P
Sbjct: 1651 PAYGPASPAYSPASPA-YSP 1669
Score = 99.0 bits (245), Expect = 2e-19
Identities = 49/80 (61%), Positives = 59/80 (73%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP SP YSP SP+YSP SP+YSP+SP YSP+SP S SP Y P+SP +SP S
Sbjct: 1605 SPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYGPASPAYSPAS 1664
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
YSP+ P YSP+S + Y P
Sbjct: 1665 PAYSPASPAYSPASPA-YDP 1683
Score = 98.2 bits (243), Expect = 3e-19
Identities = 49/82 (59%), Positives = 59/82 (71%), Gaps = 5/82 (6%)
Frame = -2
Query: 536 PSSP----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
P SP YSP SP YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP
Sbjct: 1498 PGSPAAAGYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSP 1557
Query: 368 -STGYSPSQPGYSPSSTSQYTP 306
S YSP+ P YSP+S + Y+P
Sbjct: 1558 ASPAYSPASPAYSPASPA-YSP 1578
Score = 95.5 bits (236), Expect = 2e-18
Identities = 45/73 (61%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
SP+SP YSP SP YSP SP+YSP SP+YSP+SP YSP+SP SP YSP+SP +SP S
Sbjct: 1612 SPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYGPASPAYSPASPAYSPAS 1671
Query: 365 TGYSPSQPGYSPS 327
YSP+ P Y P+
Sbjct: 1672 PAYSPASPAYDPA 1684
Score = 83.6 bits (205), Expect = 8e-15
Identities = 38/62 (61%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSP SP YSP SP+YSP SP+Y P+SP YSP+SP S SP YSP+SP + P+
Sbjct: 1626 SPASPAYSPASPAYSPASPAYSPASPAYGPASPAYSPASPAYSPASPAYSPASPAYDPAE 1685
Query: 362 GY 357
Y
Sbjct: 1686 PY 1687
Score = 63.9 bits (154), Expect = 7e-09
Identities = 27/42 (64%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN 417
SP+SP Y P SP YSP SP+YSP SP+YSP+SP Y P+ PY+
Sbjct: 1647 SPASPAYGPASPAYSPASPAYSPASPAYSPASPAYDPAEPYD 1688
[150][TOP]
>UniRef100_C6HNU4 DNA-directed RNA polymerase II n=1 Tax=Ajellomyces capsulatus H143
RepID=C6HNU4_AJECH
Length = 668
Score = 101 bits (251), Expect = 4e-20
Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 12/90 (13%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SPS SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP+SP STG
Sbjct: 545 SPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTG 604
Query: 359 ------------YSPSQPGYSPSSTSQYTP 306
Y+P+ PG+SP+S Y+P
Sbjct: 605 RHLSPTSPTSPKYTPTSPGWSPTSPETYSP 634
Score = 87.4 bits (215), Expect = 6e-16
Identities = 47/94 (50%), Positives = 63/94 (67%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSPYSPTSPN-------------YSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGVS 405
SPSS YSPTSP +SP SP+++PTSP+YSP+SP+Y SP+SP S S
Sbjct: 502 SPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTS 561
Query: 404 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
P +SP+SP +SP S +SP+ P +SP+S S Y+P
Sbjct: 562 PGFSPTSPSYSPTSPSFSPASPAFSPTSPS-YSP 594
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/111 (42%), Positives = 62/111 (55%), Gaps = 36/111 (32%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY-----------NSGVSPDY 396
SP+SP +SPTSP+YSPTSPS+SP SP++SP+SP+YSP+SP S SP Y
Sbjct: 558 SPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKY 617
Query: 395 SPSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 315
+P+SP +SP S GYSP+ P ++P S Q
Sbjct: 618 TPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISPRQ 668
Score = 66.6 bits (161), Expect = 1e-09
Identities = 45/100 (45%), Positives = 57/100 (57%), Gaps = 25/100 (25%)
Frame = -2
Query: 530 SPYSPTSPN--YSPTSP-SYSPTSPSYSP-------------------SSPTYSPSSPYN 417
SP+ SP YSP+SP + SPTSP YSP SSP +SP+SP
Sbjct: 475 SPHGARSPGGGYSPSSPFNTSPTSPRYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPAF 534
Query: 416 SGVSPDYSPSSPQF--SP-STGYSPSQPGYSPSSTSQYTP 306
+ SP YSP+SP + SP S YSP+ PG+SP+S S Y+P
Sbjct: 535 APTSPAYSPTSPSYQQSPTSPSYSPTSPGFSPTSPS-YSP 573
Score = 65.5 bits (158), Expect = 2e-09
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = -2
Query: 539 SPSSPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP YSP+SP N SPTSP YSP+S YSP+SP S +SP SP +SP+SP F+P++
Sbjct: 481 SPGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMS-SPGFSPASPAFAPTS 538
Query: 362 GYSPSQPGYSPSSTSQYTPQTN 297
P YSP+S S T+
Sbjct: 539 ------PAYSPTSPSYQQSPTS 554
[151][TOP]
>UniRef100_C0NEY2 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
RepID=C0NEY2_AJECG
Length = 1234
Score = 101 bits (251), Expect = 4e-20
Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 12/90 (13%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SPS SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP+SP STG
Sbjct: 1111 SPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTG 1170
Query: 359 ------------YSPSQPGYSPSSTSQYTP 306
Y+P+ PG+SP+S Y+P
Sbjct: 1171 RHLSPTSPTSPKYTPTSPGWSPTSPETYSP 1200
Score = 87.4 bits (215), Expect = 6e-16
Identities = 47/94 (50%), Positives = 63/94 (67%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSPYSPTSPN-------------YSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGVS 405
SPSS YSPTSP +SP SP+++PTSP+YSP+SP+Y SP+SP S S
Sbjct: 1068 SPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTS 1127
Query: 404 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
P +SP+SP +SP S +SP+ P +SP+S S Y+P
Sbjct: 1128 PGFSPTSPSYSPTSPSFSPASPAFSPTSPS-YSP 1160
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/111 (42%), Positives = 62/111 (55%), Gaps = 36/111 (32%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY-----------NSGVSPDY 396
SP+SP +SPTSP+YSPTSPS+SP SP++SP+SP+YSP+SP S SP Y
Sbjct: 1124 SPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKY 1183
Query: 395 SPSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 315
+P+SP +SP S GYSP+ P ++P S Q
Sbjct: 1184 TPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISPRQ 1234
Score = 66.6 bits (161), Expect = 1e-09
Identities = 45/100 (45%), Positives = 57/100 (57%), Gaps = 25/100 (25%)
Frame = -2
Query: 530 SPYSPTSPN--YSPTSP-SYSPTSPSYSP-------------------SSPTYSPSSPYN 417
SP+ SP YSP+SP + SPTSP YSP SSP +SP+SP
Sbjct: 1041 SPHGARSPGGGYSPSSPFNTSPTSPRYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPAF 1100
Query: 416 SGVSPDYSPSSPQF--SP-STGYSPSQPGYSPSSTSQYTP 306
+ SP YSP+SP + SP S YSP+ PG+SP+S S Y+P
Sbjct: 1101 APTSPAYSPTSPSYQQSPTSPSYSPTSPGFSPTSPS-YSP 1139
Score = 65.5 bits (158), Expect = 2e-09
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = -2
Query: 539 SPSSPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP YSP+SP N SPTSP YSP+S YSP+SP S +SP SP +SP+SP F+P++
Sbjct: 1047 SPGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMS-SPGFSPASPAFAPTS 1104
Query: 362 GYSPSQPGYSPSSTSQYTPQTN 297
P YSP+S S T+
Sbjct: 1105 ------PAYSPTSPSYQQSPTS 1120
[152][TOP]
>UniRef100_A6QYA7 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
RepID=A6QYA7_AJECN
Length = 1747
Score = 101 bits (251), Expect = 4e-20
Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 12/90 (13%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SPS SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP+SP STG
Sbjct: 1624 SPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTG 1683
Query: 359 ------------YSPSQPGYSPSSTSQYTP 306
Y+P+ PG+SP+S Y+P
Sbjct: 1684 RHLSPTSPTSPKYTPTSPGWSPTSPETYSP 1713
Score = 87.4 bits (215), Expect = 6e-16
Identities = 47/94 (50%), Positives = 63/94 (67%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSPYSPTSPN-------------YSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGVS 405
SPSS YSPTSP +SP SP+++PTSP+YSP+SP+Y SP+SP S S
Sbjct: 1581 SPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTS 1640
Query: 404 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
P +SP+SP +SP S +SP+ P +SP+S S Y+P
Sbjct: 1641 PGFSPTSPSYSPTSPSFSPASPAFSPTSPS-YSP 1673
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/111 (42%), Positives = 62/111 (55%), Gaps = 36/111 (32%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY-----------NSGVSPDY 396
SP+SP +SPTSP+YSPTSPS+SP SP++SP+SP+YSP+SP S SP Y
Sbjct: 1637 SPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKY 1696
Query: 395 SPSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 315
+P+SP +SP S GYSP+ P ++P S Q
Sbjct: 1697 TPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISPRQ 1747
Score = 66.6 bits (161), Expect = 1e-09
Identities = 45/100 (45%), Positives = 57/100 (57%), Gaps = 25/100 (25%)
Frame = -2
Query: 530 SPYSPTSPN--YSPTSP-SYSPTSPSYSP-------------------SSPTYSPSSPYN 417
SP+ SP YSP+SP + SPTSP YSP SSP +SP+SP
Sbjct: 1554 SPHGARSPGGGYSPSSPFNTSPTSPRYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPAF 1613
Query: 416 SGVSPDYSPSSPQF--SP-STGYSPSQPGYSPSSTSQYTP 306
+ SP YSP+SP + SP S YSP+ PG+SP+S S Y+P
Sbjct: 1614 APTSPAYSPTSPSYQQSPTSPSYSPTSPGFSPTSPS-YSP 1652
Score = 65.5 bits (158), Expect = 2e-09
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = -2
Query: 539 SPSSPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP YSP+SP N SPTSP YSP+S YSP+SP S +SP SP +SP+SP F+P++
Sbjct: 1560 SPGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMS-SPGFSPASPAFAPTS 1617
Query: 362 GYSPSQPGYSPSSTSQYTPQTN 297
P YSP+S S T+
Sbjct: 1618 ------PAYSPTSPSYQQSPTS 1633
[153][TOP]
>UniRef100_Q84KP6 DNA-directed RNA polymerase n=1 Tax=Cyanidioschyzon merolae
RepID=Q84KP6_CYAME
Length = 1819
Score = 100 bits (250), Expect = 5e-20
Identities = 54/88 (61%), Positives = 65/88 (73%), Gaps = 8/88 (9%)
Frame = -2
Query: 539 SPSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 366
SP+SP SPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+SP +SPS
Sbjct: 1637 SPTSPRLVSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPS 1696
Query: 365 T---GYSPSQP--GYSPSSTS-QYTPQT 300
+ YSPS P YSPSS + Y+P +
Sbjct: 1697 SPNVAYSPSSPNVAYSPSSPNVAYSPSS 1724
Score = 83.2 bits (204), Expect = 1e-14
Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 10/90 (11%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSY--------SPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SP+ + T +SP+SP+Y SPTSP+YSP+SP YSP+SP S SP YSP+S
Sbjct: 1617 SPAGGGTGTLGAFSPSSPAYSPTSPRLVSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1676
Query: 383 PQFSP-STGYSPSQPGYSPSSTS-QYTPQT 300
P +SP S YSP+ P YSPSS + Y+P +
Sbjct: 1677 PAYSPTSPAYSPTSPAYSPSSPNVAYSPSS 1706
Score = 81.3 bits (199), Expect = 4e-14
Identities = 56/115 (48%), Positives = 63/115 (54%), Gaps = 35/115 (30%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPS--------------------YSPSSP--TYSPS 429
SP+SP YSPTSP YSPTSP+YSP+SP+ YSPSSP YSPS
Sbjct: 1673 SPTSPAYSPTSPAYSPTSPAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPS 1732
Query: 428 SPYNSGVSPD-----YSPSSPQF-----SPSTGYSPSQP--GYSPSSTSQYTPQT 300
SP N SP YSPSSP SP+ YSPS P YSPSS Y+P +
Sbjct: 1733 SP-NVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPVAYSPSS 1786
Score = 73.6 bits (179), Expect = 9e-12
Identities = 54/94 (57%), Positives = 60/94 (63%), Gaps = 22/94 (23%)
Frame = -2
Query: 539 SPSSP---YSPTSPN--YSPTSPS--YSPTSPS--YSPSSPT--YSPSSPYNSGVSPD-- 399
SPSSP YSP+SPN YSP+SP+ YSP+SP+ YSPSSP YSPSSP N SP
Sbjct: 1712 SPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSP-NVAYSPSSP 1770
Query: 398 ---YSPSSP----QFSPSTGYSPSQP--GYSPSS 324
YSPSSP SP+ YSPS P YSPSS
Sbjct: 1771 NVAYSPSSPVAYSPSSPNVAYSPSSPNVAYSPSS 1804
Score = 70.5 bits (171), Expect = 7e-11
Identities = 50/87 (57%), Positives = 57/87 (65%), Gaps = 15/87 (17%)
Frame = -2
Query: 539 SPSSP---YSPTSPN--YSPTSPS--YSPTSPS--YSPSSPT-YSPSSPYNSGVSPD--- 399
SPSSP YSP+SPN YSP+SP+ YSP+SP+ YSPSSP YSPSSP N SP
Sbjct: 1739 SPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPVAYSPSSP-NVAYSPSSPN 1797
Query: 398 --YSPSSPQFSPSTGYSPSQPGYSPSS 324
YSPSSP FSPS+ P YSP +
Sbjct: 1798 VAYSPSSPAFSPSS------PVYSPKN 1818
[154][TOP]
>UniRef100_UPI00017B0A92 UPI00017B0A92 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B0A92
Length = 1714
Score = 100 bits (249), Expect = 7e-20
Identities = 53/86 (61%), Positives = 62/86 (72%), Gaps = 9/86 (10%)
Frame = -2
Query: 536 PSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS------GVSPDYSPSSP 381
P SP Y+P SP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP
Sbjct: 1579 PRSPGGYTPQSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSGPTSPSYSPTSP 1638
Query: 380 QFSP-STGYSPSQPGYSPSSTSQYTP 306
+SP S YSP+ P YSP+S + YTP
Sbjct: 1639 SYSPTSPSYSPTSPSYSPTSPN-YTP 1663
Score = 97.4 bits (241), Expect = 6e-19
Identities = 52/98 (53%), Positives = 64/98 (65%), Gaps = 20/98 (20%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP--------------------Y 420
SP+SP PTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP Y
Sbjct: 1621 SPTSPSGPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPPHQLVPTSPYTPHISVY 1680
Query: 419 NSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 306
+ SP YSP+SP+ S YSP+ PGYSP+S + Y+P
Sbjct: 1681 SPPTSPTYSPTSPKGST---YSPTSPGYSPTSPT-YSP 1714
Score = 94.4 bits (233), Expect = 5e-18
Identities = 51/97 (52%), Positives = 61/97 (62%), Gaps = 20/97 (20%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPTSPS---------------YSPTSPSYSPSSPTYSPSSPYN 417
P+SPY P+ SPNYSPTSP+ YSPTSPSYSP+SP+YSP+SP
Sbjct: 1554 PASPYIPSPGGAMSPNYSPTSPAYEPRSPGGYTPQSPGYSPTSPSYSPTSPSYSPTSPSY 1613
Query: 416 SGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP S YSP+ P YSP+S S Y+P
Sbjct: 1614 SPTSPSYSPTSPSGPTSPSYSPTSPSYSPTSPS-YSP 1649
Score = 60.5 bits (145), Expect = 8e-08
Identities = 39/81 (48%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP- 369
+P SP SP P SP Y P+ SP+YSP+SP Y P SP Y+P SP +SP
Sbjct: 1545 TPGSPGSPG--PASP-YIPSPGGAMSPNYSPTSPAYEPRSPGG------YTPQSPGYSPT 1595
Query: 368 STGYSPSQPGYSPSSTSQYTP 306
S YSP+ P YSP+S S Y+P
Sbjct: 1596 SPSYSPTSPSYSPTSPS-YSP 1615
[155][TOP]
>UniRef100_C6F1F2 RNA polymerase II (Fragment) n=1 Tax=Plasmodium cynomolgi
RepID=C6F1F2_9APIC
Length = 232
Score = 100 bits (248), Expect = 9e-20
Identities = 48/79 (60%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YSPTSP YSPTSP Y PTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 60 SPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 119
Query: 356 SPSQPGYSPSSTSQYTPQT 300
SP+ P YSP+S P +
Sbjct: 120 SPTSPQYSPTSPVPNNPSS 138
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/73 (65%), Positives = 56/73 (76%), Gaps = 3/73 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP Y PTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SP++
Sbjct: 71 SPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTS 130
Query: 362 GY--SPSQPGYSP 330
+PS P YSP
Sbjct: 131 PVPNNPSSPHYSP 143
Score = 98.2 bits (243), Expect = 3e-19
Identities = 49/77 (63%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YS TSP YSPTSP YSPTSP Y P+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 112
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S QY+P
Sbjct: 113 SPTSPKYSPTS-PQYSP 128
Score = 87.8 bits (216), Expect = 4e-16
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 348
+S SP YS TSP YSPTSP YSP+SP Y P+SP S SP YSP+SP++SP S YSP+
Sbjct: 49 HSVVSPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 108
Query: 347 QPGYSPSSTSQYTP 306
P YSP+S +Y+P
Sbjct: 109 SPKYSPTS-PKYSP 121
Score = 75.5 bits (184), Expect = 2e-12
Identities = 48/106 (45%), Positives = 53/106 (50%), Gaps = 24/106 (22%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY-NSGVSPDYSP-------- 390
SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP N+ SP YSP
Sbjct: 92 SPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNNPSSPHYSPYAIASPKF 151
Query: 389 ---------SSPQFSPS-----TGYSPSQPGYSPSSTSQYTPQTND 294
SSP + S P P Y S Q D
Sbjct: 152 SPTSPAYSISSPVYDQSGNARNKSQHPLSPAYILQSPVQVKQHIQD 197
Score = 68.9 bits (167), Expect = 2e-10
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Frame = -2
Query: 539 SPSSPYSPTSPN----YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 372
SP + S +PN +S SP YS TSP YSP+SP YSP+SP Y P+SP++S
Sbjct: 33 SPKNQLSEMNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSP-------KYLPTSPKYS 85
Query: 371 P-STGYSPSQPGYSPSSTSQYTP 306
P S YSP+ P YSP+S +Y+P
Sbjct: 86 PTSPKYSPTSPKYSPTS-PKYSP 107
[156][TOP]
>UniRef100_C1GHL1 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb18 RepID=C1GHL1_PARBD
Length = 1746
Score = 100 bits (248), Expect = 9e-20
Identities = 50/93 (53%), Positives = 63/93 (67%), Gaps = 15/93 (16%)
Frame = -2
Query: 539 SPSSP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP+SP
Sbjct: 1621 SPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGG 1680
Query: 368 STG------------YSPSQPGYSPSSTSQYTP 306
STG Y+P+ PG+SP+S Y+P
Sbjct: 1681 STGRHLSPTSPTSPKYTPTSPGWSPTSPETYSP 1713
Score = 85.1 bits (209), Expect = 3e-15
Identities = 47/95 (49%), Positives = 58/95 (61%), Gaps = 23/95 (24%)
Frame = -2
Query: 539 SPSSPYSPTSPN-------------YSPTSPSYSPTSPSY---------SPSSPTYSPSS 426
SPSS YSPTSP +SP SP ++PTSP+Y SP+SP+YSP+S
Sbjct: 1581 SPSSGYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTS 1640
Query: 425 PYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 324
P S SP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1641 PGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1675
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/108 (43%), Positives = 62/108 (57%), Gaps = 36/108 (33%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------VSPDY 396
SP+SP +SPTSP+YSPTSPS+SP SP++SP+SP+YSP+SP G SP Y
Sbjct: 1637 SPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKY 1696
Query: 395 SPSSPQFSP------------------------STGYSPSQPGYSPSS 324
+P+SP +SP S GYSP+ P +SP+S
Sbjct: 1697 TPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPTS 1744
Score = 79.0 bits (193), Expect = 2e-13
Identities = 50/89 (56%), Positives = 60/89 (67%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSPY--SPTSPNYSPTSPSYSPTSPSYS------PSSPTYSPSSPYNSGVSPDYSPSS 384
SPSSP+ SPTSP YSP+S YSPTSP S SSP +SP+SP + SP YSP+S
Sbjct: 1566 SPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTS 1624
Query: 383 P--QFSP-STGYSPSQPGYSPSSTSQYTP 306
P Q SP S YSP+ PG+SP+S S Y+P
Sbjct: 1625 PGYQQSPTSPSYSPTSPGFSPTSPS-YSP 1652
Score = 67.8 bits (164), Expect = 5e-10
Identities = 45/86 (52%), Positives = 54/86 (62%), Gaps = 11/86 (12%)
Frame = -2
Query: 530 SPYSPTSPN--YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGV------SPDYSPSSPQ 378
SP+ SP YSP+SP + SPTSP YSPSS YSP+SP S SP +SP+SP
Sbjct: 1554 SPHGARSPGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPV 1612
Query: 377 FSP-STGYSPSQPGYSPSSTS-QYTP 306
F+P S YSP+ PGY S TS Y+P
Sbjct: 1613 FAPTSPAYSPTSPGYQQSPTSPSYSP 1638
Score = 63.5 bits (153), Expect = 9e-09
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = -2
Query: 539 SPSSPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP YSP+SP N SPTSP YSP+S YSP+SP S +SP SP +SP+SP F+P++
Sbjct: 1560 SPGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMS-SPGFSPASPVFAPTS 1617
Query: 362 GYSPSQPGYSPSS 324
P YSP+S
Sbjct: 1618 ------PAYSPTS 1624
Score = 58.9 bits (141), Expect = 2e-07
Identities = 30/44 (68%), Positives = 36/44 (81%), Gaps = 4/44 (9%)
Frame = -2
Query: 539 SPSSP--YSPTSPNYS--PTSPSYSPTSPSYSPSSPTYSPSSPY 420
SP+SP YSPTSPN+S PTSP PTSP YSP+SPT+SP+SP+
Sbjct: 1704 SPTSPETYSPTSPNFSGSPTSPG-GPTSPGYSPTSPTFSPTSPH 1746
Score = 57.8 bits (138), Expect = 5e-07
Identities = 32/56 (57%), Positives = 40/56 (71%), Gaps = 10/56 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSP-SYSPTSPSYS--------PSSPTYSPSSPYNSGVSP 402
SP+SP Y+PTSP +SPTSP +YSPTSP++S P+SP YSP+SP S SP
Sbjct: 1690 SPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPTSP 1745
[157][TOP]
>UniRef100_C0SE75 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb03 RepID=C0SE75_PARBP
Length = 2106
Score = 100 bits (248), Expect = 9e-20
Identities = 50/93 (53%), Positives = 63/93 (67%), Gaps = 15/93 (16%)
Frame = -2
Query: 539 SPSSP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP+SP
Sbjct: 1621 SPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGG 1680
Query: 368 STG------------YSPSQPGYSPSSTSQYTP 306
STG Y+P+ PG+SP+S Y+P
Sbjct: 1681 STGRHLSPTSPTSPKYTPTSPGWSPTSPETYSP 1713
Score = 85.1 bits (209), Expect = 3e-15
Identities = 47/95 (49%), Positives = 58/95 (61%), Gaps = 23/95 (24%)
Frame = -2
Query: 539 SPSSPYSPTSPN-------------YSPTSPSYSPTSPSY---------SPSSPTYSPSS 426
SPSS YSPTSP +SP SP ++PTSP+Y SP+SP+YSP+S
Sbjct: 1581 SPSSGYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTS 1640
Query: 425 PYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 324
P S SP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1641 PGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1675
Score = 82.4 bits (202), Expect = 2e-14
Identities = 46/107 (42%), Positives = 61/107 (57%), Gaps = 36/107 (33%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------VSPDY 396
SP+SP +SPTSP+YSPTSPS+SP SP++SP+SP+YSP+SP G SP Y
Sbjct: 1637 SPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKY 1696
Query: 395 SPSSPQFSP------------------------STGYSPSQPGYSPS 327
+P+SP +SP S GYSP+ P +SP+
Sbjct: 1697 TPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPT 1743
Score = 79.0 bits (193), Expect = 2e-13
Identities = 50/89 (56%), Positives = 60/89 (67%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSPY--SPTSPNYSPTSPSYSPTSPSYS------PSSPTYSPSSPYNSGVSPDYSPSS 384
SPSSP+ SPTSP YSP+S YSPTSP S SSP +SP+SP + SP YSP+S
Sbjct: 1566 SPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTS 1624
Query: 383 P--QFSP-STGYSPSQPGYSPSSTSQYTP 306
P Q SP S YSP+ PG+SP+S S Y+P
Sbjct: 1625 PGYQQSPTSPSYSPTSPGFSPTSPS-YSP 1652
Score = 71.2 bits (173), Expect = 4e-11
Identities = 36/61 (59%), Positives = 45/61 (73%), Gaps = 3/61 (4%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTY--SPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP SPTSP Y+PTSP +SPTSP +YSP+SP + SP+SP SP YSP+SP FSP+
Sbjct: 1687 SPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSP-GGPTSPGYSPTSPTFSPTCS 1745
Query: 359 Y 357
+
Sbjct: 1746 F 1746
Score = 67.8 bits (164), Expect = 5e-10
Identities = 45/86 (52%), Positives = 54/86 (62%), Gaps = 11/86 (12%)
Frame = -2
Query: 530 SPYSPTSPN--YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGV------SPDYSPSSPQ 378
SP+ SP YSP+SP + SPTSP YSPSS YSP+SP S SP +SP+SP
Sbjct: 1554 SPHGARSPGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPV 1612
Query: 377 FSP-STGYSPSQPGYSPSSTS-QYTP 306
F+P S YSP+ PGY S TS Y+P
Sbjct: 1613 FAPTSPAYSPTSPGYQQSPTSPSYSP 1638
Score = 63.5 bits (153), Expect = 9e-09
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = -2
Query: 539 SPSSPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP YSP+SP N SPTSP YSP+S YSP+SP S +SP SP +SP+SP F+P++
Sbjct: 1560 SPGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMS-SPGFSPASPVFAPTS 1617
Query: 362 GYSPSQPGYSPSS 324
P YSP+S
Sbjct: 1618 ------PAYSPTS 1624
[158][TOP]
>UniRef100_C5GKA7 DNA-directed RNA polymerase n=2 Tax=Ajellomyces dermatitidis
RepID=C5GKA7_AJEDR
Length = 1746
Score = 99.8 bits (247), Expect = 1e-19
Identities = 50/93 (53%), Positives = 63/93 (67%), Gaps = 15/93 (16%)
Frame = -2
Query: 539 SPSSP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP+SP
Sbjct: 1620 SPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGI 1679
Query: 368 STG------------YSPSQPGYSPSSTSQYTP 306
STG Y+P+ PG+SP+S Y+P
Sbjct: 1680 STGRHLSPTSPTSPKYTPTSPGWSPTSPETYSP 1712
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/95 (49%), Positives = 59/95 (62%), Gaps = 23/95 (24%)
Frame = -2
Query: 539 SPSSPYSPTSPN-------------YSPTSPSYSPTSPSY---------SPSSPTYSPSS 426
SPSS YSPTSP +SP SP+++PTSP+Y SP+SP+YSP+S
Sbjct: 1580 SPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPGYQQSPTSPSYSPTS 1639
Query: 425 PYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 324
P S SP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1640 PGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1674
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/111 (42%), Positives = 63/111 (56%), Gaps = 36/111 (32%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY-----------NSGVSPDY 396
SP+SP +SPTSP+YSPTSPS+SP SP++SP+SP+YSP+SP S SP Y
Sbjct: 1636 SPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGISTGRHLSPTSPTSPKY 1695
Query: 395 SPSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 315
+P+SP +SP S GYSP+ P ++P+S Q
Sbjct: 1696 TPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPTSPRQ 1746
Score = 77.4 bits (189), Expect = 6e-13
Identities = 49/89 (55%), Positives = 60/89 (67%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSPY--SPTSPNYSPTSPSYSPTSPSYS------PSSPTYSPSSPYNSGVSPDYSPSS 384
SP+SP+ SPTSP YSP+S YSPTSP S SSP +SP+SP + SP YSP+S
Sbjct: 1565 SPTSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTS 1623
Query: 383 P--QFSP-STGYSPSQPGYSPSSTSQYTP 306
P Q SP S YSP+ PG+SP+S S Y+P
Sbjct: 1624 PGYQQSPTSPSYSPTSPGFSPTSPS-YSP 1651
Score = 69.7 bits (169), Expect = 1e-10
Identities = 46/86 (53%), Positives = 54/86 (62%), Gaps = 11/86 (12%)
Frame = -2
Query: 530 SPYSPTSPN--YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGV------SPDYSPSSPQ 378
SP+ SP YSPTSP + SPTSP YSPSS YSP+SP S SP +SP+SP
Sbjct: 1553 SPHGARSPGGGYSPTSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPA 1611
Query: 377 FSP-STGYSPSQPGYSPSSTS-QYTP 306
F+P S YSP+ PGY S TS Y+P
Sbjct: 1612 FAPTSPAYSPTSPGYQQSPTSPSYSP 1637
Score = 65.5 bits (158), Expect = 2e-09
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = -2
Query: 539 SPSSPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP YSPTSP N SPTSP YSP+S YSP+SP S +SP SP +SP+SP F+P++
Sbjct: 1559 SPGGGYSPTSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMS-SPGFSPASPAFAPTS 1616
Query: 362 GYSPSQPGYSPSS 324
P YSP+S
Sbjct: 1617 ------PAYSPTS 1623
[159][TOP]
>UniRef100_B4MAN9 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
RepID=B4MAN9_DROVI
Length = 1889
Score = 99.4 bits (246), Expect = 1e-19
Identities = 49/88 (55%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST- 363
SP + YSP+S NYS SPSYSP SPSYSPSSP+YSP+SP S SP YSP+SP ++P+T
Sbjct: 1668 SPGNAYSPSSSNYSSNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATP 1727
Query: 362 GYSPSQPGYSPSSTSQYTPQTNDKDERG 279
YSP+ P YS S Y+P + + G
Sbjct: 1728 SYSPTSPNYSAS--PHYSPASPAYSQTG 1753
Score = 97.8 bits (242), Expect = 4e-19
Identities = 45/78 (57%), Positives = 58/78 (74%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
S S YSP SP+YSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S
Sbjct: 1682 SNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPH 1741
Query: 359 YSPSQPGYSPSSTSQYTP 306
YSP+ P YS + +Y+P
Sbjct: 1742 YSPASPAYSQTGV-KYSP 1758
Score = 95.1 bits (235), Expect = 3e-18
Identities = 52/94 (55%), Positives = 62/94 (65%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGVSPDYSPSSP 381
SP SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P++P N SP YSP+SP
Sbjct: 1688 SPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASP 1747
Query: 380 QFSPS-TGYSPSQPGYSPSSTS--------QYTP 306
+S + YSP+ P YSP S S QYTP
Sbjct: 1748 AYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 89.7 bits (221), Expect = 1e-16
Identities = 53/109 (48%), Positives = 66/109 (60%), Gaps = 31/109 (28%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS--------------------PSSPTYSPSSP 423
SP+SP YSPTSPNY+P +PSYSPTSP+YS P+SPTYSP SP
Sbjct: 1709 SPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSP 1768
Query: 422 YNSGV---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 306
G SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1769 SYDGSPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 89.0 bits (219), Expect = 2e-16
Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSP------- 402
SP SP Y+P SP YSPTSP YSPTSP YSPSSP +SPS+ Y+ S SP
Sbjct: 1773 SPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 401 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 306
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 85.1 bits (209), Expect = 3e-15
Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
S S YSPTSPNY+ +SP + SP+YSPSSP YSP+SP + S Y+ ++P F+P ST
Sbjct: 1574 SVSPSYSPTSPNYTASSPGGA--SPNYSPSSPNYSPTSPLYTATSLRYASATPNFNPQST 1631
Query: 362 GYSPSQPGYSPSSTSQYTPQTN 297
GYSPS GYSP+S Y+P +N
Sbjct: 1632 GYSPSSSGYSPTS-PVYSPTSN 1652
Score = 84.7 bits (208), Expect = 4e-15
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-- 366
SPS+ YSPT YS TSP YSP YSPSS YSP+SP + + +YSP+SP +SP+
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867
Query: 365 TGYSPSQPGYSPSS 324
+ YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881
Score = 84.0 bits (206), Expect = 6e-15
Identities = 46/85 (54%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGVSPDYSPSSPQ 378
SPS SP SP Y+P SP YSPTSP YSP+SP YSPSSP + S YS +SP+
Sbjct: 1767 SPSYDGSPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 1826
Query: 377 FSPSTG-YSPSQPGYSPSSTSQYTP 306
+SP+ YSPS YSP+S + YTP
Sbjct: 1827 YSPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/89 (55%), Positives = 60/89 (67%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP YSP SP+Y SP SP Y+P SP YSP+SP YSP+SP S SP +SPS+ Q+SP
Sbjct: 1757 SPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPSN-QYSP 1815
Query: 368 --------STGYSPSQPGYSPSSTSQYTP 306
S YSP+ YSPSST +Y+P
Sbjct: 1816 TGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 77.0 bits (188), Expect = 8e-13
Identities = 54/129 (41%), Positives = 62/129 (48%), Gaps = 49/129 (37%)
Frame = -2
Query: 539 SPSSP-YSPTSP---------------------NYSPTSPSYSPTSP------------- 465
SPSSP YSPTSP YSP+S YSPTSP
Sbjct: 1599 SPSSPNYSPTSPLYTATSLRYASATPNFNPQSTGYSPSSSGYSPTSPVYSPTSNFQSSPS 1658
Query: 464 -------------SYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPS 327
+YSPSS YS +SP S +SP YSPSSP +SP S YSP+ P YSP+
Sbjct: 1659 FAGSGSNMYSPGNAYSPSSSNYSSNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPT 1718
Query: 326 STSQYTPQT 300
S + YTP T
Sbjct: 1719 SPN-YTPAT 1726
Score = 71.6 bits (174), Expect = 3e-11
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGVSPDYSPSSPQFSPS 366
S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 1832 SIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 64.3 bits (155), Expect = 5e-09
Identities = 31/41 (75%), Positives = 36/41 (87%), Gaps = 2/41 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 423
SP+SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1842 SPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 62.4 bits (150), Expect = 2e-08
Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 19/91 (20%)
Frame = -2
Query: 539 SPS---SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPD 399
SPS S +P P++SP+ SPS+SP P SPSSP + SP + VSP
Sbjct: 1519 SPSGHVSGMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPHFSTSPSVSPS 1578
Query: 398 YSPSSPQFSPST------GYSPSQPGYSPSS 324
YSP+SP ++ S+ YSPS P YSP+S
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1609
[160][TOP]
>UniRef100_C1H3Q4 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb01 RepID=C1H3Q4_PARBA
Length = 1748
Score = 99.0 bits (245), Expect = 2e-19
Identities = 49/93 (52%), Positives = 63/93 (67%), Gaps = 15/93 (16%)
Frame = -2
Query: 539 SPSSP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP+SP SPTSP+YSPTSP +SPTSP+YSP+SP++SP+SP S SP YSP+SP
Sbjct: 1626 SPTSPGYQQSPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPALGG 1685
Query: 368 STG------------YSPSQPGYSPSSTSQYTP 306
STG Y+P+ PG+SP+S Y+P
Sbjct: 1686 STGRHLSPTSPTSPKYTPTSPGWSPTSPETYSP 1718
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/95 (49%), Positives = 59/95 (62%), Gaps = 23/95 (24%)
Frame = -2
Query: 539 SPSSPYSPTSPN-------------YSPTSPSYSPTSPSY---------SPSSPTYSPSS 426
SPSS YSPTSP +SP SP ++PTSP+Y SP+SP+YSP+S
Sbjct: 1586 SPSSGYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTS 1645
Query: 425 PYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 324
P S SP+YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1646 PGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1680
Score = 85.5 bits (210), Expect = 2e-15
Identities = 48/101 (47%), Positives = 63/101 (62%), Gaps = 29/101 (28%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------VSPDY 396
SP+SP +SPTSPNYSPTSPS+SP SP++SP+SP+YSP+SP G SP Y
Sbjct: 1642 SPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKY 1701
Query: 395 SPSSPQFSPSTG--YSPSQP---------------GYSPSS 324
+P+SP +SP++ YSP+ P GYSP+S
Sbjct: 1702 TPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 1742
Score = 70.5 bits (171), Expect = 7e-11
Identities = 36/58 (62%), Positives = 44/58 (75%), Gaps = 3/58 (5%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTY--SPSSPYNSGVSPDYSPSSPQFSPS 366
SP SPTSP Y+PTSP +SPTSP +YSP+SP + SP+SP SP YSP+SP FSP+
Sbjct: 1692 SPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSP-GGPTSPGYSPTSPTFSPT 1748
Score = 67.8 bits (164), Expect = 5e-10
Identities = 45/86 (52%), Positives = 54/86 (62%), Gaps = 11/86 (12%)
Frame = -2
Query: 530 SPYSPTSPN--YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGV------SPDYSPSSPQ 378
SP+ SP YSP+SP + SPTSP YSPSS YSP+SP S SP +SP+SP
Sbjct: 1559 SPHGARSPGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPV 1617
Query: 377 FSP-STGYSPSQPGYSPSSTS-QYTP 306
F+P S YSP+ PGY S TS Y+P
Sbjct: 1618 FAPTSPAYSPTSPGYQQSPTSPSYSP 1643
Score = 63.5 bits (153), Expect = 9e-09
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = -2
Query: 539 SPSSPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP YSP+SP N SPTSP YSP+S YSP+SP S +SP SP +SP+SP F+P++
Sbjct: 1565 SPGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMS-SPGFSPASPVFAPTS 1622
Query: 362 GYSPSQPGYSPSS 324
P YSP+S
Sbjct: 1623 ------PAYSPTS 1629
[161][TOP]
>UniRef100_C6F1F3 RNA polymerase II (Fragment) n=1 Tax=Plasmodium cynomolgi
RepID=C6F1F3_9APIC
Length = 225
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/73 (65%), Positives = 56/73 (76%), Gaps = 3/73 (4%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP Y PTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SP++
Sbjct: 64 SPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTS 123
Query: 362 GY--SPSQPGYSP 330
+PS P YSP
Sbjct: 124 PVPNNPSSPHYSP 136
Score = 96.3 bits (238), Expect = 1e-18
Identities = 47/79 (59%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YS TSP YSPTSP YSPTSP Y P+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 112
Query: 356 SPSQPGYSPSSTSQYTPQT 300
SP+ P YSP+S P +
Sbjct: 113 SPTSPQYSPTSPVPNNPSS 131
Score = 95.5 bits (236), Expect = 2e-18
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YSPTSP YSPTSP Y PTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 60 SPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQY 119
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P + S+ Y+P
Sbjct: 120 SPTSPVPNNPSSPHYSP 136
Score = 89.4 bits (220), Expect = 2e-16
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 348
+S SP YS TSP YSPTSP YSP+SP Y P+SP S SP YSP+SP++SP S YSP+
Sbjct: 49 HSVVSPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 108
Query: 347 QPGYSPSSTSQYTP 306
P YSP+S QY+P
Sbjct: 109 SPKYSPTS-PQYSP 121
Score = 75.5 bits (184), Expect = 2e-12
Identities = 48/106 (45%), Positives = 53/106 (50%), Gaps = 24/106 (22%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY-NSGVSPDYSP-------- 390
SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP N+ SP YSP
Sbjct: 85 SPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNNPSSPHYSPYAIASPKF 144
Query: 389 ---------SSPQFSPS-----TGYSPSQPGYSPSSTSQYTPQTND 294
SSP + S P P Y S Q D
Sbjct: 145 SPTSPAYSISSPVYDQSGNARNKSQHPLSPAYILQSPVQVKQHIQD 190
Score = 68.9 bits (167), Expect = 2e-10
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Frame = -2
Query: 539 SPSSPYSPTSPN----YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 372
SP + S +PN +S SP YS TSP YSP+SP YSP+SP Y P+SP++S
Sbjct: 33 SPKNQLSEMNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSP-------KYLPTSPKYS 85
Query: 371 P-STGYSPSQPGYSPSSTSQYTP 306
P S YSP+ P YSP+S +Y+P
Sbjct: 86 PTSPKYSPTSPKYSPTS-PKYSP 107
[162][TOP]
>UniRef100_C6F1F0 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F0_PLAVI
Length = 218
Score = 98.6 bits (244), Expect = 2e-19
Identities = 47/70 (67%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY- 357
S YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SPS+
Sbjct: 60 SPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVP 119
Query: 356 -SPSQPGYSP 330
+PS P YSP
Sbjct: 120 NNPSSPHYSP 129
Score = 95.1 bits (235), Expect = 3e-18
Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQY 112
Query: 356 SPSQPGYSPSSTSQYTP 306
SPS P + S+ Y+P
Sbjct: 113 SPSSPVPNNPSSPHYSP 129
Score = 90.9 bits (224), Expect = 5e-17
Identities = 45/76 (59%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 348
+S SP YS TSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S YSP+
Sbjct: 49 HSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 108
Query: 347 QPGYSPSSTSQYTPQT 300
P YSPSS P +
Sbjct: 109 SPQYSPSSPVPNNPSS 124
Score = 78.2 bits (191), Expect = 3e-13
Identities = 46/99 (46%), Positives = 57/99 (57%), Gaps = 21/99 (21%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPS--------------------YSPTSPSYSPSSPTYSPSSPYNS 414
SS + T YSPTSP+ YS TSP YSP+SP YSP+SP S
Sbjct: 19 SSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYS 78
Query: 413 GVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 300
SP YSP+SP++SP S YSP+ P YSP+S QY+P +
Sbjct: 79 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PQYSPSS 116
Score = 57.0 bits (136), Expect = 8e-07
Identities = 44/118 (37%), Positives = 52/118 (44%), Gaps = 29/118 (24%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSP-------------------------SSPTY 438
SP+SP YSPTSP YSPTSP YSPTSP YSP +SP Y
Sbjct: 85 SPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSPYAIASPKFSPTSPAY 144
Query: 437 SPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP--QTNDKDERGKD 273
S SSP S S SP+ SP Q S ++P Q N ++ + D
Sbjct: 145 SISSPVYDQSGNARSKSQHPLSPAYILQSPVQVKQHIQDVSVFSPIQQANAEEVQNDD 202
[163][TOP]
>UniRef100_Q5KGG3 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q5KGG3_CRYNE
Length = 1786
Score = 98.6 bits (244), Expect = 2e-19
Identities = 51/82 (62%), Positives = 61/82 (74%), Gaps = 10/82 (12%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPS--------YSPSSPTYSPSSPYNSGVSPDYSPS 387
SP+SP YSPTSP +SPTSPSYSPTSP+ YSP+SP +SP+SP S SP YSP+
Sbjct: 1667 SPTSPRYSPTSPAFSPTSPSYSPTSPAPFQATSPRYSPTSPQFSPTSPTYSPASPAYSPT 1726
Query: 386 SPQFSP-STGYSPSQPGYSPSS 324
SPQ+SP S YSP+ P YSP+S
Sbjct: 1727 SPQYSPTSPAYSPTSPAYSPTS 1748
Score = 96.3 bits (238), Expect = 1e-18
Identities = 53/91 (58%), Positives = 62/91 (68%), Gaps = 13/91 (14%)
Frame = -2
Query: 539 SPSSPYSP-----------TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN-SGVSPDY 396
SP SP SP TSP YSPTSP YSPTSP++SP+SP+YSP+SP SP Y
Sbjct: 1643 SPYSPTSPAYSPTSPMGGITSPQYSPTSPRYSPTSPAFSPTSPSYSPTSPAPFQATSPRY 1702
Query: 395 SPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
SP+SPQFSP S YSP+ P YSP+S QY+P
Sbjct: 1703 SPTSPQFSPTSPTYSPASPAYSPTS-PQYSP 1732
Score = 95.1 bits (235), Expect = 3e-18
Identities = 50/96 (52%), Positives = 64/96 (66%), Gaps = 10/96 (10%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPS--------YSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 387
SP+SP +SPTSP+YSPTSP+ YSPTSP +SP+SPTYSP+SP S SP YSP+
Sbjct: 1674 SPTSPAFSPTSPSYSPTSPAPFQATSPRYSPTSPQFSPTSPTYSPASPAYSPTSPQYSPT 1733
Query: 386 SPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDKDER 282
SP +SP S YSP+ P Y ++ + T Q + R
Sbjct: 1734 SPAYSPTSPAYSPTSPAYGGAAPNGGTAQQQNGQAR 1769
Score = 92.0 bits (227), Expect = 2e-17
Identities = 48/101 (47%), Positives = 59/101 (58%), Gaps = 27/101 (26%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG------------------- 411
S YSPTSP YSPTSP +SPTSPS+SPSSPTYSP+SP G
Sbjct: 1595 SPAYSPTSPQYSPTSPQFSPTSPSFSPSSPTYSPASPAYGGAGAGNRASPYSPTSPAYSP 1654
Query: 410 -------VSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 312
SP YSP+SP++SP S +SP+ P YSP+S + +
Sbjct: 1655 TSPMGGITSPQYSPTSPRYSPTSPAFSPTSPSYSPTSPAPF 1695
Score = 84.3 bits (207), Expect = 5e-15
Identities = 48/113 (42%), Positives = 62/113 (54%), Gaps = 35/113 (30%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSP----------------SYSPTSPSYSPSSPTYSPSSPYNSGV 408
SP+SP++ TSP YSPTSP Y TSP+YSP+SP YSP+SP S
Sbjct: 1556 SPTSPFAVTSPAYSPTSPFAGAAAGAASPWVGRGGYGATSPAYSPTSPQYSPTSPQFSPT 1615
Query: 407 SPDYSPSSPQFSP-------------STGYSPSQPGYSPSS------TSQYTP 306
SP +SPSSP +SP ++ YSP+ P YSP+S + QY+P
Sbjct: 1616 SPSFSPSSPTYSPASPAYGGAGAGNRASPYSPTSPAYSPTSPMGGITSPQYSP 1668
Score = 82.0 bits (201), Expect = 2e-14
Identities = 44/87 (50%), Positives = 52/87 (59%), Gaps = 20/87 (22%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSP------------DYSPSSP 381
Y TSP YSPTSP YSPTSP +SP+SP++SPSSP S SP YSP+SP
Sbjct: 1591 YGATSPAYSPTSPQYSPTSPQFSPTSPSFSPSSPTYSPASPAYGGAGAGNRASPYSPTSP 1650
Query: 380 QFSP--------STGYSPSQPGYSPSS 324
+SP S YSP+ P YSP+S
Sbjct: 1651 AYSPTSPMGGITSPQYSPTSPRYSPTS 1677
Score = 72.4 bits (176), Expect = 2e-11
Identities = 43/85 (50%), Positives = 52/85 (61%), Gaps = 18/85 (21%)
Frame = -2
Query: 524 YSPTSP-NYSPTSPSYSPTSPSYSPSSP----------------TYSPSSPYNSGVSPDY 396
YSP+SP YSPTSP ++ TSP+YSP+SP Y +SP S SP Y
Sbjct: 1547 YSPSSPAGYSPTSP-FAVTSPAYSPTSPFAGAAAGAASPWVGRGGYGATSPAYSPTSPQY 1605
Query: 395 SPSSPQFSP-STGYSPSQPGYSPSS 324
SP+SPQFSP S +SPS P YSP+S
Sbjct: 1606 SPTSPQFSPTSPSFSPSSPTYSPAS 1630
Score = 70.1 bits (170), Expect = 1e-10
Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP Y ++P + P + +
Sbjct: 1717 SPASPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYGGAAPNGGTAQQQNGQARPGWGNTG 1776
Query: 362 GYSPS 348
GY S
Sbjct: 1777 GYGTS 1781
[164][TOP]
>UniRef100_Q1E2G9 DNA-directed RNA polymerase n=1 Tax=Coccidioides immitis
RepID=Q1E2G9_COCIM
Length = 1750
Score = 98.2 bits (243), Expect = 3e-19
Identities = 49/95 (51%), Positives = 63/95 (66%), Gaps = 17/95 (17%)
Frame = -2
Query: 539 SPSSP-----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 375
SP+SP SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP+SP
Sbjct: 1622 SPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPAL 1681
Query: 374 SPSTG------------YSPSQPGYSPSSTSQYTP 306
+TG Y+P+ PG+SP+S Y+P
Sbjct: 1682 GGATGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSP 1716
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 25/97 (25%)
Frame = -2
Query: 539 SPSSPYSPTSPN-------------YSPTSPSYSPTSPSY-----------SPSSPTYSP 432
SPSS YSPTSP +SP SP+++PTSP+Y SP+SP+YSP
Sbjct: 1582 SPSSGYSPTSPGMSITSPRYMTSPGFSPASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSP 1641
Query: 431 SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 324
+SP S SP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1642 TSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1678
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/111 (42%), Positives = 63/111 (56%), Gaps = 36/111 (32%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGV-----------SPDY 396
SP+SP +SPTSP+YSPTSPS+SP SP++SP+SP+YSP+SP G SP Y
Sbjct: 1640 SPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPKY 1699
Query: 395 SPSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 315
+P+SP +SP S GYSP+ P ++P+S Q
Sbjct: 1700 TPTSPGWSPTSPEAYSPTSPNFAGSPTSPGGPTSPGYSPTSPTFNPTSPRQ 1750
Score = 79.7 bits (195), Expect = 1e-13
Identities = 48/93 (51%), Positives = 59/93 (63%), Gaps = 19/93 (20%)
Frame = -2
Query: 539 SPSSPY--SPTSPNYSP------TSPSYSPTSPSY------SPSSPTYSPSSPYNSGVSP 402
SP+SP+ SPTSP YSP TSP S TSP Y SP+SPT++P+SP S SP
Sbjct: 1567 SPTSPFNTSPTSPGYSPSSGYSPTSPGMSITSPRYMTSPGFSPASPTFAPTSPAYSPTSP 1626
Query: 401 DY----SPSSPQFSP-STGYSPSQPGYSPSSTS 318
Y SP+SP +SP S G+SP+ P YSP+S S
Sbjct: 1627 GYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPS 1659
Score = 63.2 bits (152), Expect = 1e-08
Identities = 41/72 (56%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Frame = -2
Query: 530 SPYSPTSPN-YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 360
SP SP YSPTSP + SPTSP YSPSS YSP+SP S SP Y +SP FSP S
Sbjct: 1556 SPAGARSPGGYSPTSPFNTSPTSPGYSPSSG-YSPTSPGMSITSPRYM-TSPGFSPASPT 1613
Query: 359 YSPSQPGYSPSS 324
++P+ P YSP+S
Sbjct: 1614 FAPTSPAYSPTS 1625
Score = 53.5 bits (127), Expect = 9e-06
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTS--------PSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 381
P S +SP S T P + SP+ + S YSP+SP+N+ SP+SP
Sbjct: 1526 PDSQFSPIGQTGSETPAGFTEYQPPGFGGFSPAGARSPGGYSPTSPFNT------SPTSP 1579
Query: 380 QFSPSTGYSPSQPGYSPSSTSQYT 309
+SPS+GYSP+ PG S +S T
Sbjct: 1580 GYSPSSGYSPTSPGMSITSPRYMT 1603
[165][TOP]
>UniRef100_C5PAJ4 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735 delta
SOWgp RepID=C5PAJ4_COCP7
Length = 1746
Score = 98.2 bits (243), Expect = 3e-19
Identities = 49/95 (51%), Positives = 63/95 (66%), Gaps = 17/95 (17%)
Frame = -2
Query: 539 SPSSP-----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 375
SP+SP SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP+SP
Sbjct: 1622 SPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPAL 1681
Query: 374 SPSTG------------YSPSQPGYSPSSTSQYTP 306
+TG Y+P+ PG+SP+S Y+P
Sbjct: 1682 GGATGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSP 1716
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 25/97 (25%)
Frame = -2
Query: 539 SPSSPYSPTSPN-------------YSPTSPSYSPTSPSY-----------SPSSPTYSP 432
SPSS YSPTSP +SP SP+++PTSP+Y SP+SP+YSP
Sbjct: 1582 SPSSGYSPTSPGMSITSPRYMTSPGFSPASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSP 1641
Query: 431 SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 324
+SP S SP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1642 TSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1678
Score = 81.3 bits (199), Expect = 4e-14
Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 36/107 (33%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGV-----------SPDY 396
SP+SP +SPTSP+YSPTSPS+SP SP++SP+SP+YSP+SP G SP Y
Sbjct: 1640 SPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPKY 1699
Query: 395 SPSSPQFSP------------------------STGYSPSQPGYSPS 327
+P+SP +SP S GYSP+ P ++P+
Sbjct: 1700 TPTSPGWSPTSPEAYSPTSPNFAGSPTSPGGPTSPGYSPTSPTFNPT 1746
Score = 81.3 bits (199), Expect = 4e-14
Identities = 48/94 (51%), Positives = 62/94 (65%), Gaps = 22/94 (23%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYS---------------PSSPT---YSPSSPYN 417
SP+SP YSPTSP++SP SP++SPTSPSYS P+SPT Y+P+SP
Sbjct: 1647 SPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPKYTPTSPGW 1706
Query: 416 SGVSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 324
S SP+ YSP+SP F SP++ P+ PGYSP+S
Sbjct: 1707 SPTSPEAYSPTSPNFAGSPTSPGGPTSPGYSPTS 1740
Score = 79.7 bits (195), Expect = 1e-13
Identities = 48/93 (51%), Positives = 59/93 (63%), Gaps = 19/93 (20%)
Frame = -2
Query: 539 SPSSPY--SPTSPNYSP------TSPSYSPTSPSY------SPSSPTYSPSSPYNSGVSP 402
SP+SP+ SPTSP YSP TSP S TSP Y SP+SPT++P+SP S SP
Sbjct: 1567 SPTSPFNTSPTSPGYSPSSGYSPTSPGMSITSPRYMTSPGFSPASPTFAPTSPAYSPTSP 1626
Query: 401 DY----SPSSPQFSP-STGYSPSQPGYSPSSTS 318
Y SP+SP +SP S G+SP+ P YSP+S S
Sbjct: 1627 GYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPS 1659
Score = 63.2 bits (152), Expect = 1e-08
Identities = 41/72 (56%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Frame = -2
Query: 530 SPYSPTSPN-YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 360
SP SP YSPTSP + SPTSP YSPSS YSP+SP S SP Y +SP FSP S
Sbjct: 1556 SPAGARSPGGYSPTSPFNTSPTSPGYSPSSG-YSPTSPGMSITSPRYM-TSPGFSPASPT 1613
Query: 359 YSPSQPGYSPSS 324
++P+ P YSP+S
Sbjct: 1614 FAPTSPAYSPTS 1625
Score = 53.5 bits (127), Expect = 9e-06
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTS--------PSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 381
P S +SP S T P + SP+ + S YSP+SP+N+ SP+SP
Sbjct: 1526 PDSQFSPIGQTGSETPAGFTEYQPPGFGGFSPAGARSPGGYSPTSPFNT------SPTSP 1579
Query: 380 QFSPSTGYSPSQPGYSPSSTSQYT 309
+SPS+GYSP+ PG S +S T
Sbjct: 1580 GYSPSSGYSPTSPGMSITSPRYMT 1603
[166][TOP]
>UniRef100_O77375 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7
RepID=O77375_PLAF7
Length = 2457
Score = 97.8 bits (242), Expect = 4e-19
Identities = 47/71 (66%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 2285 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2344
Query: 356 SPSQPGYSPSS 324
SP+ P YSP+S
Sbjct: 2345 SPTSPKYSPTS 2355
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 2292 SPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2351
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P ++ Y+P
Sbjct: 2352 SPTSPVAQNIASPNYSP 2368
Score = 92.0 bits (227), Expect = 2e-17
Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
+S Y+ SP YS TSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 2278 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2337
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S +Y+P
Sbjct: 2338 SPTSPKYSPTS-PKYSP 2353
Score = 76.3 bits (186), Expect = 1e-12
Identities = 46/97 (47%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGVSPDY 396
SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YS +SP S SP Y
Sbjct: 2324 SPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAY 2383
Query: 395 SPSSPQFSPS---TGYSPSQPGYSPSSTSQYTPQTND 294
S SSP + S + P P Y S Q D
Sbjct: 2384 SISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 2420
Score = 74.7 bits (182), Expect = 4e-12
Identities = 42/88 (47%), Positives = 53/88 (60%), Gaps = 12/88 (13%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPS-----------YSPSSPTYSPSSPYNSGVSPDYSPS 387
S YSPTSP Y+ + YSPTSP Y+ SP YS +SP S SP YSP+
Sbjct: 2246 SPSYSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPT 2305
Query: 386 SPQFSP-STGYSPSQPGYSPSSTSQYTP 306
SP++SP S YSP+ P YSP+S +Y+P
Sbjct: 2306 SPKYSPTSPKYSPTSPKYSPTS-PKYSP 2332
Score = 66.2 bits (160), Expect = 1e-09
Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 19/86 (22%)
Frame = -2
Query: 506 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------------------SGVSPDYSPSSP 381
N++ SPSYSPTSP+Y+ ++ YSP+SP N S SP YSP+SP
Sbjct: 2241 NHNIYSPSYSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSP 2300
Query: 380 QFSP-STGYSPSQPGYSPSSTSQYTP 306
++SP S YSP+ P YSP+S +Y+P
Sbjct: 2301 KYSPTSPKYSPTSPKYSPTS-PKYSP 2325
[167][TOP]
>UniRef100_Q7SDN0 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
RepID=Q7SDN0_NEUCR
Length = 1752
Score = 97.1 bits (240), Expect = 7e-19
Identities = 51/91 (56%), Positives = 66/91 (72%), Gaps = 4/91 (4%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPD-YSPSSPQF--SP 369
SP+ +SPTSP+YSPTSPSYSP SP++ +SP+YSP+SP S SPD YSP+SP F SP
Sbjct: 1658 SPAQQFSPTSPSYSPTSPSYSPASPAFQATSPSYSPASPTWSPTSPDAYSPTSPSFQRSP 1717
Query: 368 STGYSPSQP-GYSPSSTSQYTPQTNDKDERG 279
SP+ P GYSP+S QY+P+T ++ G
Sbjct: 1718 GQQLSPTSPTGYSPTS-PQYSPRTPGRNNSG 1747
Score = 72.0 bits (175), Expect = 3e-11
Identities = 45/95 (47%), Positives = 58/95 (61%), Gaps = 17/95 (17%)
Frame = -2
Query: 539 SPSSP---YSPTSPNYSP-----TSPSYSPTSPSYSPSSPTY---SPSSPYNSGVSPDYS 393
SPSSP YSP+SP +SP +SP+SPS+SP+SP SP+SP S SP YS
Sbjct: 1586 SPSSPAAGYSPSSPLLDSAGRFASSPQFSPSSPSFSPTSPMLRPGSPTSPSYSPTSPSYS 1645
Query: 392 PSSP------QFSPSTGYSPSQPGYSPSSTSQYTP 306
P+SP SP+ +SP+ P YSP+S S Y+P
Sbjct: 1646 PASPAAARYSPTSPAQQFSPTSPSYSPTSPS-YSP 1679
Score = 61.2 bits (147), Expect = 4e-08
Identities = 46/102 (45%), Positives = 55/102 (53%), Gaps = 24/102 (23%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSP----SYSPSSPT--YSPSSPYNSGV-----SPDYS 393
S +S S TSP TSP ++PTSP YSPSSP YSPSSP SP +S
Sbjct: 1558 SGTSYSSATSPR--ATSP-FTPTSPFSYGGYSPSSPAAGYSPSSPLLDSAGRFASSPQFS 1614
Query: 392 PSSPQFSP-----------STGYSPSQPGYSPSS--TSQYTP 306
PSSP FSP S YSP+ P YSP+S ++Y+P
Sbjct: 1615 PSSPSFSPTSPMLRPGSPTSPSYSPTSPSYSPASPAAARYSP 1656
[168][TOP]
>UniRef100_C4JY44 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704
RepID=C4JY44_UNCRE
Length = 1747
Score = 97.1 bits (240), Expect = 7e-19
Identities = 49/95 (51%), Positives = 62/95 (65%), Gaps = 17/95 (17%)
Frame = -2
Query: 539 SPSSP-----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 375
SP+SP SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP+SP
Sbjct: 1574 SPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPAL 1633
Query: 374 SPSTG------------YSPSQPGYSPSSTSQYTP 306
TG Y+P+ PG+SP+S Y+P
Sbjct: 1634 GGVTGRHLSPTSPTSPKYTPTSPGWSPTSPDAYSP 1668
Score = 86.7 bits (213), Expect = 1e-15
Identities = 48/97 (49%), Positives = 59/97 (60%), Gaps = 25/97 (25%)
Frame = -2
Query: 539 SPSSPYSPTSPN-------------YSPTSPSYSPTSPSY-----------SPSSPTYSP 432
SPSS YSPTSP +SP SPS++PTSP+Y SP+SP+YSP
Sbjct: 1534 SPSSGYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPGYGQAQSPTSPSYSP 1593
Query: 431 SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 324
+SP S SP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1594 TSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1630
Score = 86.3 bits (212), Expect = 1e-15
Identities = 50/108 (46%), Positives = 67/108 (62%), Gaps = 30/108 (27%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGV-----------SPDY 396
SP+SP +SPTSP+YSPTSPS+SP SP++SP+SP+YSP+SP GV SP Y
Sbjct: 1592 SPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGVTGRHLSPTSPTSPKY 1651
Query: 395 SPSSPQFSPST--GYSPSQ----------------PGYSPSSTSQYTP 306
+P+SP +SP++ YSP+ PGYSP+S + Y P
Sbjct: 1652 TPTSPGWSPTSPDAYSPTSPNFAGSPTSPGWSLLPPGYSPTSPT-YNP 1698
Score = 69.3 bits (168), Expect = 2e-10
Identities = 34/58 (58%), Positives = 45/58 (77%), Gaps = 3/58 (5%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTY--SPSSPYNSGVSPDYSPSSPQFSPS 366
SP SPTSP Y+PTSP +SPTSP +YSP+SP + SP+SP S + P YSP+SP ++P+
Sbjct: 1642 SPTSPTSPKYTPTSPGWSPTSPDAYSPTSPNFAGSPTSPGWSLLPPGYSPTSPTYNPN 1699
Score = 66.6 bits (161), Expect = 1e-09
Identities = 47/91 (51%), Positives = 57/91 (62%), Gaps = 13/91 (14%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGV-------SPDYSPSS 384
SP+ SP YSPTSP + SPTSP YSPSS YSP+SP G+ SP +SP+S
Sbjct: 1507 SPAGARSPGG-GYSPTSPFNTSPTSPGYSPSS-GYSPTSP-GMGITSPRFMTSPGFSPAS 1563
Query: 383 PQFSP-STGYSPSQPGY----SPSSTSQYTP 306
P F+P S YSP+ PGY SP+S S Y+P
Sbjct: 1564 PSFAPTSPAYSPTSPGYGQAQSPTSPS-YSP 1593
[169][TOP]
>UniRef100_B3L428 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H
RepID=B3L428_PLAKH
Length = 2353
Score = 96.7 bits (239), Expect = 9e-19
Identities = 46/70 (65%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY- 357
S YSPTSP YSPTSP Y PTSP YSP+SP YSP+SP S SP YSP+SPQ+SP++
Sbjct: 2195 SPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPVP 2254
Query: 356 -SPSQPGYSP 330
SPS P YSP
Sbjct: 2255 NSPSSPHYSP 2264
Score = 91.7 bits (226), Expect = 3e-17
Identities = 44/77 (57%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S Y+ TSP YSPTSP YSPTSP Y P+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 2188 SPAYAVTSPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQY 2247
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P + S+ Y+P
Sbjct: 2248 SPTSPVPNSPSSPHYSP 2264
Score = 87.0 bits (214), Expect = 8e-16
Identities = 42/76 (55%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 348
+S SP Y+ TSP YSPTSP YSP+SP Y P+SP S SP YSP+SP++SP S YSP+
Sbjct: 2184 HSVLSPAYAVTSPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 2243
Query: 347 QPGYSPSSTSQYTPQT 300
P YSP+S +P +
Sbjct: 2244 SPQYSPTSPVPNSPSS 2259
Score = 82.0 bits (201), Expect = 2e-14
Identities = 47/78 (60%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSGVSPDYSPSSPQFSP- 369
SP+SP YSPTSP YSPTSP YSPTSP YSP+SP SPSSP+ S Y+ +SP+FSP
Sbjct: 2220 SPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNSPSSPHYS----PYAIASPKFSPT 2275
Query: 368 STGYSPSQPGYSPSSTSQ 315
S YS S P Y SS ++
Sbjct: 2276 SPAYSISSPVYDQSSNAR 2293
[170][TOP]
>UniRef100_Q54LJ4 Type A von Willebrand factor domain-containing protein n=1
Tax=Dictyostelium discoideum RepID=Q54LJ4_DICDI
Length = 2563
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/70 (65%), Positives = 51/70 (72%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYS 354
S PYSPTSP Y PTSPSYSPTSPSYSP+SP+YSP+SP S SP YS S S S YS
Sbjct: 1843 SQPYSPTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLYASTSQSYS 1902
Query: 353 PSQPGYSPSS 324
P P Y+P+S
Sbjct: 1903 PVSPSYTPTS 1912
Score = 94.7 bits (234), Expect = 4e-18
Identities = 53/91 (58%), Positives = 62/91 (68%), Gaps = 8/91 (8%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS------GVSPDYSPSSP 381
SP+SP Y PTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S S YSP SP
Sbjct: 1847 SPTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLYASTSQSYSPVSP 1906
Query: 380 QFSP-STGYSPSQPGYSPSSTSQYTPQTNDK 291
++P S Y+P+ P YSP S S Y P K
Sbjct: 1907 SYTPTSLLYAPTIPSYSPVSPS-YAPTKPSK 1936
Score = 87.0 bits (214), Expect = 8e-16
Identities = 44/77 (57%), Positives = 52/77 (67%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
P S + S YSPTSP Y PTSPSYSP+SP+YSP+SP S SP YSP+SP +S S Y
Sbjct: 1835 PPSLFFQASQPYSPTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLY 1894
Query: 356 SPSQPGYSPSSTSQYTP 306
+ + YSP S S YTP
Sbjct: 1895 ASTSQSYSPVSPS-YTP 1910
Score = 81.6 bits (200), Expect = 3e-14
Identities = 45/90 (50%), Positives = 55/90 (61%), Gaps = 15/90 (16%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYS-------------PTSPSYSPSSPTYSPSSPYNSGVSP 402
SP+SP YSPTSP+YSPTSPSYS P SPSY+P+S Y+P+ P S VSP
Sbjct: 1868 SPTSPSYSPTSPSYSPTSPSYSTSPLYASTSQSYSPVSPSYTPTSLLYAPTIPSYSPVSP 1927
Query: 401 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 315
Y+P+ P P T YSPS P +S S +
Sbjct: 1928 SYAPTKPSKLPVLTSYSPSSPSFSKSKAKE 1957
Score = 75.1 bits (183), Expect = 3e-12
Identities = 42/89 (47%), Positives = 51/89 (57%), Gaps = 12/89 (13%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
S S YSP SP+Y+PTS Y+PT PSYSP SP+Y+P+ P V YSPSSP FS S
Sbjct: 1896 STSQSYSPVSPSYTPTSLLYAPTIPSYSPVSPSYAPTKPSKLPVLTSYSPSSPSFSKSKA 1955
Query: 359 YS---------PSQP---GYSPSSTSQYT 309
PS+P GYS ST ++
Sbjct: 1956 KEESTLSEINLPSKPMVAGYSRMSTVSFS 1984
[171][TOP]
>UniRef100_B6QAY2 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC 18224
RepID=B6QAY2_PENMQ
Length = 1744
Score = 96.3 bits (238), Expect = 1e-18
Identities = 52/102 (50%), Positives = 61/102 (59%), Gaps = 24/102 (23%)
Frame = -2
Query: 539 SPSSP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SP SP YSPTSP++ TSPSYSPTSP +SPSSP YSPSSP S SP +SPSS
Sbjct: 1608 SPQSPAFAITSPAYSPTSPSFQATSPSYSPTSPRFSPSSPNYSPSSPNFSPASPAFSPSS 1667
Query: 383 PQFSP----------------STGYSPSQPGYSPSSTSQYTP 306
P +SP S YSP+ PG+SP+S Y+P
Sbjct: 1668 PTYSPTSPAIGGRQFSPSSPSSPKYSPASPGWSPTSPEIYSP 1709
Score = 90.5 bits (223), Expect = 7e-17
Identities = 46/85 (54%), Positives = 61/85 (71%), Gaps = 5/85 (5%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
S S +SP SP ++ TSP+YSPTSPS+ +SP+YSP+SP S SP+YSPSSP FSP S
Sbjct: 1602 STSPGFSPQSPAFAITSPAYSPTSPSFQATSPSYSPTSPRFSPSSPNYSPSSPNFSPASP 1661
Query: 362 GYSPSQPGYSPSSTS----QYTPQT 300
+SPS P YSP+S + Q++P +
Sbjct: 1662 AFSPSSPTYSPTSPAIGGRQFSPSS 1686
Score = 85.1 bits (209), Expect = 3e-15
Identities = 50/105 (47%), Positives = 65/105 (61%), Gaps = 27/105 (25%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG--------VSPDYSPS 387
SP+SP +SP+SPNYSP+SP++SP SP++SPSSPTYSP+SP G SP YSP+
Sbjct: 1636 SPTSPRFSPSSPNYSPSSPNFSPASPAFSPSSPTYSPTSPAIGGRQFSPSSPSSPKYSPA 1695
Query: 386 SPQFSPSTG--YSPSQPG----------------YSPSSTSQYTP 306
SP +SP++ YSP+ P YSP+S QY P
Sbjct: 1696 SPGWSPTSPEIYSPTSPNIHGSPTSPARGATSPSYSPTS-PQYNP 1739
Score = 71.6 bits (174), Expect = 3e-11
Identities = 34/59 (57%), Positives = 43/59 (72%), Gaps = 3/59 (5%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPS-YSPSSPTY--SPSSPYNSGVSPDYSPSSPQFSPST 363
SP SP+SP YSP SP +SPTSP YSP+SP SP+SP SP YSP+SPQ++P++
Sbjct: 1683 SPSSPSSPKYSPASPGWSPTSPEIYSPTSPNIHGSPTSPARGATSPSYSPTSPQYNPTS 1741
Score = 57.4 bits (137), Expect = 6e-07
Identities = 29/43 (67%), Positives = 34/43 (79%), Gaps = 4/43 (9%)
Frame = -2
Query: 539 SPSSP--YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSP 423
SP+SP YSPTSPN SPTSP+ TSPSYSP+SP Y+P+SP
Sbjct: 1700 SPTSPEIYSPTSPNIHGSPTSPARGATSPSYSPTSPQYNPTSP 1742
Score = 53.9 bits (128), Expect = 7e-06
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 11/65 (16%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYNSGVSPDYS 393
SPSSP YSP SP +SPTSP SPTSP+ +SP+YSP+ SP Y+
Sbjct: 1686 SPSSPKYSPASPGWSPTSPEIYSPTSPNIHGSPTSPARGATSPSYSPT-------SPQYN 1738
Query: 392 PSSPQ 378
P+SP+
Sbjct: 1739 PTSPR 1743
[172][TOP]
>UniRef100_A2QAT7 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2QAT7_ASPNC
Length = 1747
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/79 (58%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP +SPTSPNYSPTSPS+SP SP++SP+SP+YSP+SP GV SP+SP S
Sbjct: 1638 SPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAVGGVGRHLSPTSP---TSP 1694
Query: 362 GYSPSQPGYSPSSTSQYTP 306
Y+P+ PG+SP+S Y+P
Sbjct: 1695 KYTPTSPGWSPTSPQTYSP 1713
Score = 89.0 bits (219), Expect = 2e-16
Identities = 48/97 (49%), Positives = 62/97 (63%), Gaps = 25/97 (25%)
Frame = -2
Query: 539 SPSSPYSPT---------------------SPNYSPTSPSYSPTSPSY---SPSSPTYSP 432
SP+S YSPT SP+++PTSP+YSPTSP+Y SP+SP+YSP
Sbjct: 1580 SPTSSYSPTSPGMAITSPRFMSTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSP 1639
Query: 431 SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 324
+SP S SP+YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1640 TSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1676
Score = 80.1 bits (196), Expect = 9e-14
Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 14/89 (15%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGVSPDY 396
SP+SP +SPTSP+YSPTSP+ SPTSP Y+P+SP +SP+SP S SP++
Sbjct: 1659 SPASPAFSPTSPSYSPTSPAVGGVGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNF 1718
Query: 395 --SPSSPQFSPSTGYSPSQPGYSPSSTSQ 315
SP+SP S GYSP+ P +SP+S Q
Sbjct: 1719 AGSPTSPGGPTSPGYSPTSPAFSPTSPRQ 1747
Score = 79.0 bits (193), Expect = 2e-13
Identities = 49/91 (53%), Positives = 61/91 (67%), Gaps = 13/91 (14%)
Frame = -2
Query: 539 SPSSPYS--PTSPNYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYNSGVSPDYSPS 387
SPSSP+S PTSP YSPTS SYSPTSP + +SP +SP+SP + SP YSP+
Sbjct: 1565 SPSSPFSANPTSPGYSPTS-SYSPTSPGMAITSPRFMSTSPGFSPASPSFAPTSPAYSPT 1623
Query: 386 SP---QFSP-STGYSPSQPGYSPSSTSQYTP 306
SP Q SP S YSP+ PG+SP+S + Y+P
Sbjct: 1624 SPAYGQASPTSPSYSPTSPGFSPTSPN-YSP 1653
Score = 71.2 bits (173), Expect = 4e-11
Identities = 42/78 (53%), Positives = 54/78 (69%), Gaps = 5/78 (6%)
Frame = -2
Query: 524 YSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSP 351
YSP+SP + +PTSP YSPTS SYSP+SP + +SP SP +SP+SP F+P S YSP
Sbjct: 1564 YSPSSPFSANPTSPGYSPTS-SYSPTSPGMAITSPRFMSTSPGFSPASPSFAPTSPAYSP 1622
Query: 350 SQPGY---SPSSTSQYTP 306
+ P Y SP+S S Y+P
Sbjct: 1623 TSPAYGQASPTSPS-YSP 1639
Score = 64.7 bits (156), Expect = 4e-09
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
SP + + YSP+SP S +PTSP YSP+S +YSP+SP + SP + +SP FSP S +
Sbjct: 1555 SPAATSPAGYSPSSPFSANPTSPGYSPTS-SYSPTSPGMAITSPRFMSTSPGFSPASPSF 1613
Query: 356 SPSQPGYSPSS 324
+P+ P YSP+S
Sbjct: 1614 APTSPAYSPTS 1624
[173][TOP]
>UniRef100_C5FCL2 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
RepID=C5FCL2_NANOT
Length = 1748
Score = 95.9 bits (237), Expect = 2e-18
Identities = 50/94 (53%), Positives = 63/94 (67%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSP-----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP-- 381
SP+SP SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP+SP
Sbjct: 1621 SPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPVFSPTSPSYSPTSPAL 1680
Query: 380 -----QFSP----STGYSPSQPGYSPSSTSQYTP 306
SP S Y+P+ PG+SP+S Y+P
Sbjct: 1681 GGTGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSP 1714
Score = 90.9 bits (224), Expect = 5e-17
Identities = 46/76 (60%), Positives = 58/76 (76%), Gaps = 6/76 (7%)
Frame = -2
Query: 533 SSP-YSPTSPNYSPTSPSYSPTSPSY----SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SSP +SP SP+++PTSP+YSPTSP Y SP+SP+YSP+SP S SP YSP+SP FSP
Sbjct: 1602 SSPAFSPASPSFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSP 1661
Query: 368 -STGYSPSQPGYSPSS 324
S +SP+ P YSP+S
Sbjct: 1662 ASPVFSPTSPSYSPTS 1677
Score = 85.5 bits (210), Expect = 2e-15
Identities = 46/83 (55%), Positives = 56/83 (67%), Gaps = 11/83 (13%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSP------SYSPTSPSYSPSSPTYSPSSP----YNSGVSPDYSP 390
SPSS YSPTSP S TSP ++SP SPS++P+SP YSP+SP S SP YSP
Sbjct: 1581 SPSSGYSPTSPGMSITSPRFISSPAFSPASPSFAPTSPAYSPTSPGYGQAQSPTSPSYSP 1640
Query: 389 SSPQFSP-STGYSPSQPGYSPSS 324
+SP FSP S YSP+ P +SP+S
Sbjct: 1641 TSPGFSPTSPSYSPTSPSFSPAS 1663
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 25/99 (25%)
Frame = -2
Query: 539 SPSSPYSPTSP-NYSPTSPSYSP-------------------TSPSYSPSSPTYSPSSPY 420
SP YSP+SP N SPTSP+YSP +SP++SP+SP+++P+SP
Sbjct: 1560 SPGGGYSPSSPFNTSPTSPAYSPSSGYSPTSPGMSITSPRFISSPAFSPASPSFAPTSPA 1619
Query: 419 NSGVSPDY----SPSSPQFSP-STGYSPSQPGYSPSSTS 318
S SP Y SP+SP +SP S G+SP+ P YSP+S S
Sbjct: 1620 YSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPS 1658
Score = 77.0 bits (188), Expect = 8e-13
Identities = 44/89 (49%), Positives = 59/89 (66%), Gaps = 14/89 (15%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSY----------SPTSPSYSPSSPTYSPSSP-YNSGVSPDY 396
SP+SP +SPTSP+YSPTSP+ SPTSP Y+P+SP +SP+SP S SP++
Sbjct: 1660 SPASPVFSPTSPSYSPTSPALGGTGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPNF 1719
Query: 395 --SPSSPQFSPSTGYSPSQPGYSPSSTSQ 315
SP+SP S GYSP+ P ++P+S Q
Sbjct: 1720 SGSPTSPGGPTSPGYSPTSPTFNPTSPRQ 1748
Score = 69.7 bits (169), Expect = 1e-10
Identities = 45/102 (44%), Positives = 57/102 (55%), Gaps = 27/102 (26%)
Frame = -2
Query: 530 SPYSPTSPN--YSPTSP-SYSPTSPSYSP-------------------SSPTYSPSSPYN 417
SP+ P SP YSP+SP + SPTSP+YSP SSP +SP+SP
Sbjct: 1554 SPHEPRSPGGGYSPSSPFNTSPTSPAYSPSSGYSPTSPGMSITSPRFISSPAFSPASPSF 1613
Query: 416 SGVSPDYSPSSP-----QFSPSTGYSPSQPGYSPSSTSQYTP 306
+ SP YSP+SP Q S YSP+ PG+SP+S S Y+P
Sbjct: 1614 APTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPS-YSP 1654
Score = 54.7 bits (130), Expect = 4e-06
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 12/83 (14%)
Frame = -2
Query: 536 PSSPYSPTSP----------NYSPTSPSYSPTSPSYSPSSPT--YSPSSPYNSGVSPDYS 393
P S +SP +Y P PSY SP + P SP YSPSSP+N+ S
Sbjct: 1524 PDSQFSPVRQAGSENAVGFADYQP--PSYGGFSP-HEPRSPGGGYSPSSPFNT------S 1574
Query: 392 PSSPQFSPSTGYSPSQPGYSPSS 324
P+SP +SPS+GYSP+ PG S +S
Sbjct: 1575 PTSPAYSPSSGYSPTSPGMSITS 1597
[174][TOP]
>UniRef100_Q9HGZ5 DNA-directed RNA polymerase n=2 Tax=Aspergillus RepID=Q9HGZ5_ASPOR
Length = 1748
Score = 95.1 bits (235), Expect = 3e-18
Identities = 45/79 (56%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP +SPTSPNYSPTSPS+SP SP++SP+SP+YSP+SP G + SP+SP S
Sbjct: 1639 SPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAARHLSPTSP---TSP 1695
Query: 362 GYSPSQPGYSPSSTSQYTP 306
Y+P+ PG+SP+S Y+P
Sbjct: 1696 KYTPTSPGWSPTSPQTYSP 1714
Score = 90.1 bits (222), Expect = 9e-17
Identities = 49/97 (50%), Positives = 62/97 (63%), Gaps = 25/97 (25%)
Frame = -2
Query: 539 SPSSPYSPT---------------------SPNYSPTSPSYSPTSPSY---SPSSPTYSP 432
SPSS YSPT SP+++PTSP+YSPTSP+Y SP+SP+YSP
Sbjct: 1581 SPSSSYSPTSPGMAMTSPRFSMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSP 1640
Query: 431 SSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 324
+SP S SP+YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1641 TSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1677
Score = 81.3 bits (199), Expect = 4e-14
Identities = 46/89 (51%), Positives = 59/89 (66%), Gaps = 14/89 (15%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGVSPDY 396
SP+SP +SPTSP+YSPTSP+ SPTSP Y+P+SP +SP+SP S SP++
Sbjct: 1660 SPASPAFSPTSPSYSPTSPAIGGAARHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNF 1719
Query: 395 --SPSSPQFSPSTGYSPSQPGYSPSSTSQ 315
SP+SP S GYSP+ P +SPSS Q
Sbjct: 1720 AGSPTSPGGPTSPGYSPTSPAFSPSSPRQ 1748
Score = 79.0 bits (193), Expect = 2e-13
Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 13/91 (14%)
Frame = -2
Query: 539 SPSSPYS--PTSPNYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYNSGVSPDYSPS 387
SPSSP+S PTSP YSP+S SYSPTSP +S +SP +SP+SP + SP YSP+
Sbjct: 1566 SPSSPFSANPTSPGYSPSS-SYSPTSPGMAMTSPRFSMTSPGFSPASPSFAPTSPAYSPT 1624
Query: 386 SP---QFSP-STGYSPSQPGYSPSSTSQYTP 306
SP Q SP S YSP+ PG+SP+S + Y+P
Sbjct: 1625 SPAYGQASPTSPSYSPTSPGFSPTSPN-YSP 1654
Score = 70.9 bits (172), Expect = 6e-11
Identities = 42/78 (53%), Positives = 55/78 (70%), Gaps = 5/78 (6%)
Frame = -2
Query: 524 YSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSP 351
YSP+SP + +PTSP YSP+S SYSP+SP + +SP S SP +SP+SP F+P S YSP
Sbjct: 1565 YSPSSPFSANPTSPGYSPSS-SYSPTSPGMAMTSPRFSMTSPGFSPASPSFAPTSPAYSP 1623
Query: 350 SQPGY---SPSSTSQYTP 306
+ P Y SP+S S Y+P
Sbjct: 1624 TSPAYGQASPTSPS-YSP 1640
Score = 67.8 bits (164), Expect = 5e-10
Identities = 37/71 (52%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
SP + + YSP+SP S +PTSP YSPSS +YSP+SP + SP +S +SP FSP S +
Sbjct: 1556 SPAATSPAGYSPSSPFSANPTSPGYSPSS-SYSPTSPGMAMTSPRFSMTSPGFSPASPSF 1614
Query: 356 SPSQPGYSPSS 324
+P+ P YSP+S
Sbjct: 1615 APTSPAYSPTS 1625
[175][TOP]
>UniRef100_B6H9U6 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6H9U6_PENCW
Length = 1733
Score = 95.1 bits (235), Expect = 3e-18
Identities = 49/92 (53%), Positives = 63/92 (68%), Gaps = 14/92 (15%)
Frame = -2
Query: 539 SPSSPY----SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP--- 381
SP+SP SPTSP+YSPTSP +SPTSP+YSP+SP++SP+SP S SP YSP+SP
Sbjct: 1611 SPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIG 1670
Query: 380 ---QFSP----STGYSPSQPGYSPSSTSQYTP 306
SP S Y+P+ PG+SP+S Y+P
Sbjct: 1671 GARHLSPTSPTSPKYTPTSPGWSPTSPQSYSP 1702
Score = 92.4 bits (228), Expect = 2e-17
Identities = 47/85 (55%), Positives = 60/85 (70%), Gaps = 13/85 (15%)
Frame = -2
Query: 539 SPSSP---------YSPTSPNYSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGVSPDY 396
SP+SP +SP SP + PTSP+YSPTSP+Y SP+SP+YSP+SP S SP+Y
Sbjct: 1582 SPTSPGIGMMTSPGFSPASPTFQPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNY 1641
Query: 395 SPSSPQFSP-STGYSPSQPGYSPSS 324
SP+SP FSP S +SP+ P YSP+S
Sbjct: 1642 SPTSPSFSPASPAFSPTSPSYSPTS 1666
Score = 83.6 bits (205), Expect = 8e-15
Identities = 48/88 (54%), Positives = 60/88 (68%), Gaps = 14/88 (15%)
Frame = -2
Query: 539 SPSSPY--SPTSPNYSPTSPSYSPTSPS--------YSPSSPTYSPSSPYNSGVSPDY-- 396
SP+SP+ SPTSP YSP+S SYSPTSP +SP+SPT+ P+SP S SP Y
Sbjct: 1561 SPTSPFNTSPTSPGYSPSS-SYSPTSPGIGMMTSPGFSPASPTFQPTSPAYSPTSPAYGQ 1619
Query: 395 -SPSSPQFSP-STGYSPSQPGYSPSSTS 318
SP+SP +SP S G+SP+ P YSP+S S
Sbjct: 1620 ASPTSPSYSPTSPGFSPTSPNYSPTSPS 1647
Score = 79.0 bits (193), Expect = 2e-13
Identities = 45/91 (49%), Positives = 57/91 (62%), Gaps = 16/91 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSY---------SPTSPSYSPSSPTYSPSSPYNSGVSPDYSP 390
SP+SP +SPTSP+YSPTSP+ SPTSP Y+P+SP +SP+SP + YSP
Sbjct: 1649 SPASPAFSPTSPSYSPTSPAIGGARHLSPTSPTSPKYTPTSPGWSPTSPQS------YSP 1702
Query: 389 SSPQFS------PSTGYSPSQPGYSPSSTSQ 315
+SP FS S YSP+ P YSP+S Q
Sbjct: 1703 TSPNFSGSPTSPTSPAYSPTSPAYSPTSPRQ 1733
Score = 61.6 bits (148), Expect = 3e-08
Identities = 42/84 (50%), Positives = 54/84 (64%), Gaps = 9/84 (10%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGV----SPDYSPSSPQFSP- 369
SP + + YSPTSP + SPTSP YSPSS +YSP+ + G+ SP +SP+SP F P
Sbjct: 1551 SPAARSPGGYSPTSPFNTSPTSPGYSPSS-SYSPT---SPGIGMMTSPGFSPASPTFQPT 1606
Query: 368 STGYSPSQPGY---SPSSTSQYTP 306
S YSP+ P Y SP+S S Y+P
Sbjct: 1607 SPAYSPTSPAYGQASPTSPS-YSP 1629
[176][TOP]
>UniRef100_B2AA31 DNA-directed RNA polymerase n=1 Tax=Podospora anserina
RepID=B2AA31_PODAN
Length = 1748
Score = 95.1 bits (235), Expect = 3e-18
Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 6/86 (6%)
Frame = -2
Query: 539 SPSSP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPD-YSPSSPQF- 375
SP+SP SPTSP+YSPTSPSYSP SP++ +SP+YSP+SP S SPD YSP+SP F
Sbjct: 1653 SPTSPAQFQSPTSPSYSPTSPSYSPASPAFQATSPSYSPASPNWSPTSPDAYSPTSPTFQ 1712
Query: 374 -SPSTGYSPSQPGYSPSSTSQYTPQT 300
SP SP+ PGYSP+S S ++P+T
Sbjct: 1713 RSPGQQMSPTSPGYSPTSPS-FSPRT 1737
Score = 88.6 bits (218), Expect = 3e-16
Identities = 47/94 (50%), Positives = 60/94 (63%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPS-------------YSPTSPSYSPSSPTYSPSSPYNSGVSP 402
SP+SP YSPTSP+YSP SP+ SPTSPSYSP+SP+YSP+SP SP
Sbjct: 1628 SPTSPSYSPTSPSYSPASPAATRHYSPTSPAQFQSPTSPSYSPTSPSYSPASPAFQATSP 1687
Query: 401 DYSPSSPQFSPST--GYSPSQPGYSPSSTSQYTP 306
YSP+SP +SP++ YSP+ P + S Q +P
Sbjct: 1688 SYSPASPNWSPTSPDAYSPTSPTFQRSPGQQMSP 1721
Score = 86.7 bits (213), Expect = 1e-15
Identities = 48/101 (47%), Positives = 62/101 (61%), Gaps = 25/101 (24%)
Frame = -2
Query: 533 SSP-YSPTSPNYSPTSPSY---SPTSPSYSPSSPTYSPSSP-------------YNSGVS 405
SSP +SP+SP++SPTSP SPTSPSYSP+SP+YSP+SP + S S
Sbjct: 1606 SSPQFSPSSPSFSPTSPMLRPGSPTSPSYSPTSPSYSPASPAATRHYSPTSPAQFQSPTS 1665
Query: 404 PDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTP 306
P YSP+SP +SP S YSP+ P +SP+S Y+P
Sbjct: 1666 PSYSPTSPSYSPASPAFQATSPSYSPASPNWSPTSPDAYSP 1706
Score = 72.0 bits (175), Expect = 3e-11
Identities = 49/113 (43%), Positives = 63/113 (55%), Gaps = 36/113 (31%)
Frame = -2
Query: 536 PSSPY--SPTSP---NYSPTSPS--YSPT------------SPSYSPSSPTYSPSSPY-- 420
P+SP+ SPTSP YSPTSP+ YSPT SP +SPSSP++SP+SP
Sbjct: 1566 PTSPFTTSPTSPFSYGYSPTSPAAGYSPTSPLIDAGGRFASSPQFSPSSPSFSPTSPMLR 1625
Query: 419 -NSGVSPDYSPSSPQFSPSTG--------------YSPSQPGYSPSSTSQYTP 306
S SP YSP+SP +SP++ SP+ P YSP+S S Y+P
Sbjct: 1626 PGSPTSPSYSPTSPSYSPASPAATRHYSPTSPAQFQSPTSPSYSPTSPS-YSP 1677
Score = 63.2 bits (152), Expect = 1e-08
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 24/84 (28%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP--YN---------------- 417
SP+SP YSPTSP+YSP SP++ TSPSYSP+SP +SP+SP Y+
Sbjct: 1662 SPTSPSYSPTSPSYSPASPAFQATSPSYSPASPNWSPTSPDAYSPTSPTFQRSPGQQMSP 1721
Query: 416 -----SGVSPDYSPSSPQFSPSTG 360
S SP +SP +P + +G
Sbjct: 1722 TSPGYSPTSPSFSPRTPGRAAGSG 1745
[177][TOP]
>UniRef100_C6F1F1 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F1_PLAVI
Length = 211
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/70 (65%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY- 357
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SPS+
Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVP 112
Query: 356 -SPSQPGYSP 330
+PS P YSP
Sbjct: 113 NNPSSPHYSP 122
Score = 86.3 bits (212), Expect = 1e-15
Identities = 43/74 (58%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 348
+S SP YS TSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S YSPS
Sbjct: 49 HSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPS 108
Query: 347 QPGYSPSSTSQYTP 306
P + S+ Y+P
Sbjct: 109 SPVPNNPSSPHYSP 122
Score = 77.0 bits (188), Expect = 8e-13
Identities = 45/99 (45%), Positives = 54/99 (54%), Gaps = 21/99 (21%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPS--------------------YSPTSPSYSPSSPTYSPSSPYNS 414
SS + T YSPTSP+ YS TSP YSP+SP YSP+SP S
Sbjct: 19 SSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYS 78
Query: 413 GVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 300
SP YSP+SP++SP S YSP+ P YSPSS P +
Sbjct: 79 PTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSS 117
Score = 57.0 bits (136), Expect = 8e-07
Identities = 44/118 (37%), Positives = 52/118 (44%), Gaps = 29/118 (24%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSP-------------------------SSPTY 438
SP+SP YSPTSP YSPTSP YSPTSP YSP +SP Y
Sbjct: 78 SPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSPYAIASPKFSPTSPAY 137
Query: 437 SPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP--QTNDKDERGKD 273
S SSP S S SP+ SP Q S ++P Q N ++ + D
Sbjct: 138 SISSPVYDQSGNARSKSQHPLSPAYILQSPVQVKQHIQDVSVFSPIQQANAEEVQNDD 195
[178][TOP]
>UniRef100_A5K7P4 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax
RepID=A5K7P4_PLAVI
Length = 2379
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/70 (65%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY- 357
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SPS+
Sbjct: 2221 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVP 2280
Query: 356 -SPSQPGYSP 330
+PS P YSP
Sbjct: 2281 NNPSSPHYSP 2290
Score = 86.3 bits (212), Expect = 1e-15
Identities = 43/74 (58%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 348
+S SP YS TSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S YSPS
Sbjct: 2217 HSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPS 2276
Query: 347 QPGYSPSSTSQYTP 306
P + S+ Y+P
Sbjct: 2277 SPVPNNPSSPHYSP 2290
Score = 60.1 bits (144), Expect = 1e-07
Identities = 49/139 (35%), Positives = 61/139 (43%), Gaps = 59/139 (42%)
Frame = -2
Query: 539 SPSSPYSPTSPN--YSPT--------SPSYSPTSPS---------------------YSP 453
SP+ YSP +SP SPSYSPTSP+ YSP
Sbjct: 2140 SPAMLYSPNRALDLFSPKQQTQNNIYSPSYSPTSPTYHLTNPASGGGSSGLNGTKAYYSP 2199
Query: 452 SSPT---------------------------YSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
+SPT YSP+SP S SP YSP+SP++SP S Y
Sbjct: 2200 TSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2259
Query: 356 SPSQPGYSPSSTSQYTPQT 300
SP+ P YSP+S QY+P +
Sbjct: 2260 SPTSPKYSPTS-PQYSPSS 2277
Score = 57.0 bits (136), Expect = 8e-07
Identities = 44/118 (37%), Positives = 52/118 (44%), Gaps = 29/118 (24%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSP-------------------------SSPTY 438
SP+SP YSPTSP YSPTSP YSPTSP YSP +SP Y
Sbjct: 2246 SPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSPYAIASPKFSPTSPAY 2305
Query: 437 SPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP--QTNDKDERGKD 273
S SSP S S SP+ SP Q S ++P Q N ++ + D
Sbjct: 2306 SISSPVYDQSGNARSKSQHPLSPAYILQSPVQVKQHIQDVSVFSPIQQANAEEVQNDD 2363
[179][TOP]
>UniRef100_C8VQG7 DNA-directed RNA polymerase (EC 2.7.7.6)
[Source:UniProtKB/TrEMBL;Acc:Q873Q6] n=2 Tax=Emericella
nidulans RepID=C8VQG7_EMENI
Length = 1745
Score = 94.7 bits (234), Expect = 4e-18
Identities = 49/92 (53%), Positives = 63/92 (68%), Gaps = 14/92 (15%)
Frame = -2
Query: 539 SPSSPY----SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP--- 381
SP+SP SPTSP+YSPTSP +SPTSP+YSP+SP++SP+SP S SP YSP+SP
Sbjct: 1620 SPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPSYSPTSPAIG 1679
Query: 380 ---QFSP----STGYSPSQPGYSPSSTSQYTP 306
SP S Y+P+ PG+SP+S Y+P
Sbjct: 1680 GARHLSPTSPTSPKYTPTSPGWSPTSPQTYSP 1711
Score = 90.5 bits (223), Expect = 7e-17
Identities = 50/109 (45%), Positives = 64/109 (58%), Gaps = 34/109 (31%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGV---------SPDYSP 390
SP+SP +SPTSPNYSPTSPS+SPTSP++SP+SP+YSP+SP G SP Y+P
Sbjct: 1637 SPTSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPSYSPTSPAIGGARHLSPTSPTSPKYTP 1696
Query: 389 SSPQFSP------------------------STGYSPSQPGYSPSSTSQ 315
+SP +SP S GYSP+ P +SP+S Q
Sbjct: 1697 TSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSPAFSPTSPRQ 1745
Score = 87.0 bits (214), Expect = 8e-16
Identities = 47/95 (49%), Positives = 62/95 (65%), Gaps = 17/95 (17%)
Frame = -2
Query: 539 SPSSPYSPTSPN-------------YSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSGV 408
SP+S YSPTSP +SP SPS++PTSP+YSP+SP Y SP+SP S
Sbjct: 1580 SPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPT 1639
Query: 407 SPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
SP +SP+SP +SP S +SP+ P +SP+S S Y+P
Sbjct: 1640 SPGFSPTSPNYSPTSPSFSPTSPAFSPTSPS-YSP 1673
Score = 80.5 bits (197), Expect = 7e-14
Identities = 51/111 (45%), Positives = 63/111 (56%), Gaps = 39/111 (35%)
Frame = -2
Query: 539 SPSSPYS--PTSP------NYSPTSP---------------------------SYSPTSP 465
SPSSP+S PTSP +YSPTSP +YSPTSP
Sbjct: 1565 SPSSPFSANPTSPGYSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSP 1624
Query: 464 SY---SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 324
+Y SP+SP+YSP+SP S SP+YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1625 AYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPSYSPTS 1675
[180][TOP]
>UniRef100_B0XMU6 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus
RepID=B0XMU6_ASPFC
Length = 1750
Score = 94.7 bits (234), Expect = 4e-18
Identities = 45/79 (56%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP +SPTSPNYSPTSPS+SP SP++SP+SP+YSP+SP G SP+SP S
Sbjct: 1638 SPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSP---TSP 1694
Query: 362 GYSPSQPGYSPSSTSQYTP 306
Y+P+ PG+SP+S Y+P
Sbjct: 1695 KYTPTSPGWSPTSPQTYSP 1713
Score = 87.0 bits (214), Expect = 8e-16
Identities = 47/95 (49%), Positives = 62/95 (65%), Gaps = 17/95 (17%)
Frame = -2
Query: 539 SPSSPYSPTSPN-------------YSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSGV 408
SP+S YSPTSP +SP SPS++PTSP+YSP+SP Y SP+SP S
Sbjct: 1581 SPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPT 1640
Query: 407 SPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
SP +SP+SP +SP S +SP+ P +SP+S S Y+P
Sbjct: 1641 SPGFSPTSPNYSPTSPSFSPASPAFSPTSPS-YSP 1674
Score = 80.5 bits (197), Expect = 7e-14
Identities = 51/111 (45%), Positives = 63/111 (56%), Gaps = 39/111 (35%)
Frame = -2
Query: 539 SPSSPYS--PTSP------NYSPTSP---------------------------SYSPTSP 465
SPSSP+S PTSP +YSPTSP +YSPTSP
Sbjct: 1566 SPSSPFSANPTSPGYSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSP 1625
Query: 464 SY---SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 324
+Y SP+SP+YSP+SP S SP+YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1626 AYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1676
Score = 79.0 bits (193), Expect = 2e-13
Identities = 46/95 (48%), Positives = 61/95 (64%), Gaps = 14/95 (14%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGVSPDY 396
SP+SP +SPTSP+YSPTSP+ SPTSP Y+P+SP +SP+SP S SP++
Sbjct: 1659 SPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNF 1718
Query: 395 --SPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTN 297
SP+SP S GYSP+ P +SPS Y P ++
Sbjct: 1719 AGSPTSPGGPTSPGYSPTSPAFSPS----YVPSSS 1749
[181][TOP]
>UniRef100_A1D1U9 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1D1U9_NEOFI
Length = 1750
Score = 94.7 bits (234), Expect = 4e-18
Identities = 45/79 (56%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP +SPTSPNYSPTSPS+SP SP++SP+SP+YSP+SP G SP+SP S
Sbjct: 1638 SPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSP---TSP 1694
Query: 362 GYSPSQPGYSPSSTSQYTP 306
Y+P+ PG+SP+S Y+P
Sbjct: 1695 KYTPTSPGWSPTSPQTYSP 1713
Score = 87.0 bits (214), Expect = 8e-16
Identities = 47/95 (49%), Positives = 62/95 (65%), Gaps = 17/95 (17%)
Frame = -2
Query: 539 SPSSPYSPTSPN-------------YSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSGV 408
SP+S YSPTSP +SP SPS++PTSP+YSP+SP Y SP+SP S
Sbjct: 1581 SPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPT 1640
Query: 407 SPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
SP +SP+SP +SP S +SP+ P +SP+S S Y+P
Sbjct: 1641 SPGFSPTSPNYSPTSPSFSPASPAFSPTSPS-YSP 1674
Score = 80.5 bits (197), Expect = 7e-14
Identities = 51/111 (45%), Positives = 63/111 (56%), Gaps = 39/111 (35%)
Frame = -2
Query: 539 SPSSPYS--PTSP------NYSPTSP---------------------------SYSPTSP 465
SPSSP+S PTSP +YSPTSP +YSPTSP
Sbjct: 1566 SPSSPFSANPTSPGYSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSP 1625
Query: 464 SY---SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 324
+Y SP+SP+YSP+SP S SP+YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1626 AYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1676
Score = 79.0 bits (193), Expect = 2e-13
Identities = 46/95 (48%), Positives = 61/95 (64%), Gaps = 14/95 (14%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGVSPDY 396
SP+SP +SPTSP+YSPTSP+ SPTSP Y+P+SP +SP+SP S SP++
Sbjct: 1659 SPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNF 1718
Query: 395 --SPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTN 297
SP+SP S GYSP+ P +SPS Y P ++
Sbjct: 1719 AGSPTSPGGPTSPGYSPTSPAFSPS----YVPSSS 1749
[182][TOP]
>UniRef100_A1CNZ4 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
RepID=A1CNZ4_ASPCL
Length = 1765
Score = 94.7 bits (234), Expect = 4e-18
Identities = 45/79 (56%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP +SPTSPNYSPTSPS+SP SP++SP+SP+YSP+SP G SP+SP S
Sbjct: 1645 SPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSP---TSP 1701
Query: 362 GYSPSQPGYSPSSTSQYTP 306
Y+P+ PG+SP+S Y+P
Sbjct: 1702 KYTPTSPGWSPTSPQTYSP 1720
Score = 85.5 bits (210), Expect = 2e-15
Identities = 43/80 (53%), Positives = 58/80 (72%), Gaps = 4/80 (5%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSGVSPDYSPSSPQFSP-S 366
+SP TSP +SP SPS++PTSP+YSP+SP Y SP+SP S SP +SP+SP +SP S
Sbjct: 1603 TSPGFMTSPGFSPVSPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTS 1662
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
+SP+ P +SP+S S Y+P
Sbjct: 1663 PSFSPASPAFSPTSPS-YSP 1681
Score = 78.6 bits (192), Expect = 3e-13
Identities = 44/85 (51%), Positives = 57/85 (67%), Gaps = 14/85 (16%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGVSPDY 396
SP+SP +SPTSP+YSPTSP+ SPTSP Y+P+SP +SP+SP S SP++
Sbjct: 1666 SPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNF 1725
Query: 395 --SPSSPQFSPSTGYSPSQPGYSPS 327
SP+SP S GYSP+ P +SPS
Sbjct: 1726 AGSPTSPGGPTSPGYSPTSPAFSPS 1750
Score = 78.2 bits (191), Expect = 3e-13
Identities = 47/97 (48%), Positives = 60/97 (61%), Gaps = 23/97 (23%)
Frame = -2
Query: 539 SPSSPYS--PTSPNYSPTSPSYSP-----------------TSPSYSPSSPTYSPSSPYN 417
SP+SP+S PTSP YSPT+ SYSP TSP +SP SP+++P+SP
Sbjct: 1569 SPTSPFSANPTSPGYSPTT-SYSPIAPGITSPRFNTSPGFMTSPGFSPVSPSFAPTSPAY 1627
Query: 416 SGVSPDY---SPSSPQFSP-STGYSPSQPGYSPSSTS 318
S SP Y SP+SP +SP S G+SP+ P YSP+S S
Sbjct: 1628 SPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPS 1664
Score = 58.5 bits (140), Expect = 3e-07
Identities = 33/63 (52%), Positives = 42/63 (66%), Gaps = 10/63 (15%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSP-SYSPTSPSYS--------PSSPTYSPSSPYNSGVSPDYSP 390
SP+SP Y+PTSP +SPTSP +YSPTSP+++ P+SP YSP+SP SP Y P
Sbjct: 1697 SPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSP---AFSPSYVP 1753
Query: 389 SSP 381
P
Sbjct: 1754 PPP 1756
Score = 57.8 bits (138), Expect = 5e-07
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYS 354
SP + + YSPTSP S +PTSP YSP++ +YSP +P G++ +SP F S G+S
Sbjct: 1559 SPAATSPAGYSPTSPFSANPTSPGYSPTT-SYSPIAP---GITSPRFNTSPGFMTSPGFS 1614
Query: 353 PSQPGYSPSSTSQYTP 306
P P ++P+S + Y+P
Sbjct: 1615 PVSPSFAPTSPA-YSP 1629
[183][TOP]
>UniRef100_Q2HDK0 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
RepID=Q2HDK0_CHAGB
Length = 1756
Score = 94.4 bits (233), Expect = 5e-18
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 6/93 (6%)
Frame = -2
Query: 539 SPSSPY---SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPD-YSPSSPQF- 375
SP+SP SPTSP+YSPTSPSYSP SP+ +SP+YSP+SP S SPD YSP+SP F
Sbjct: 1651 SPTSPQQFNSPTSPSYSPTSPSYSPASPNLHATSPSYSPASPTWSPTSPDAYSPTSPSFH 1710
Query: 374 -SPSTGYSPSQPGYSPSSTSQYTPQTNDKDERG 279
SP SP+ PGYSP+S S ++P+T + G
Sbjct: 1711 RSPGQQMSPTSPGYSPTSPS-FSPRTPGRGPSG 1742
Score = 87.0 bits (214), Expect = 8e-16
Identities = 48/101 (47%), Positives = 63/101 (62%), Gaps = 25/101 (24%)
Frame = -2
Query: 533 SSP-YSPTSPNYSPTSPSY---SPTSPSYSPSSPTYSPSSP-------------YNSGVS 405
SSP +SP+SP++SPTSP SPTSP+YSP+SP+YSP+SP +NS S
Sbjct: 1604 SSPQFSPSSPSFSPTSPMLRPGSPTSPNYSPTSPSYSPASPAATRHYSPTSPQQFNSPTS 1663
Query: 404 PDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTP 306
P YSP+SP +SP S YSP+ P +SP+S Y+P
Sbjct: 1664 PSYSPTSPSYSPASPNLHATSPSYSPASPTWSPTSPDAYSP 1704
Score = 69.3 bits (168), Expect = 2e-10
Identities = 46/108 (42%), Positives = 61/108 (56%), Gaps = 30/108 (27%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPS-YSPT------------SPSYSPSSPTYSPSSPY---NSGV 408
SP+SP+S YSPTSP+ YSPT SP +SPSSP++SP+SP S
Sbjct: 1570 SPTSPFS-YGGGYSPTSPAGYSPTSPLLDAGGRYASSPQFSPSSPSFSPTSPMLRPGSPT 1628
Query: 407 SPDYSPSSPQFSPSTG--------------YSPSQPGYSPSSTSQYTP 306
SP+YSP+SP +SP++ SP+ P YSP+S S Y+P
Sbjct: 1629 SPNYSPTSPSYSPASPAATRHYSPTSPQQFNSPTSPSYSPTSPS-YSP 1675
Score = 61.6 bits (148), Expect = 3e-08
Identities = 40/87 (45%), Positives = 49/87 (56%), Gaps = 21/87 (24%)
Frame = -2
Query: 539 SPSSP--------YSPTSPNYSPTSP-SYSPTSPSY--------SPSSPTYSPSSPYNSG 411
SP+SP YSP SP +SPTSP +YSPTSPS+ SP+SP YSP+
Sbjct: 1674 SPASPNLHATSPSYSPASPTWSPTSPDAYSPTSPSFHRSPGQQMSPTSPGYSPT------ 1727
Query: 410 VSPDYSPSSPQFSPSTG----YSPSQP 342
SP +SP +P PS G YSP+ P
Sbjct: 1728 -SPSFSPRTPGRGPSGGSGDQYSPTSP 1753
[184][TOP]
>UniRef100_Q0D054 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
RepID=Q0D054_ASPTN
Length = 1742
Score = 94.0 bits (232), Expect = 6e-18
Identities = 50/98 (51%), Positives = 62/98 (63%), Gaps = 21/98 (21%)
Frame = -2
Query: 536 PSSP-YSPTSPNY---SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
P+SP YSPTSP Y SPTSPSYSPTSP +SP+SP YSP+SP S SP +SP+SP +SP
Sbjct: 1615 PTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPNLSPASPVFSPTSPSYSP 1674
Query: 368 -----------------STGYSPSQPGYSPSSTSQYTP 306
S Y+P+ PG+SP+S Y+P
Sbjct: 1675 TSPALGAGRNMSPTSPTSPKYTPTSPGWSPTSPQSYSP 1712
Score = 87.4 bits (215), Expect = 6e-16
Identities = 43/74 (58%), Positives = 55/74 (74%), Gaps = 4/74 (5%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-S 366
S +SP SP + PTSP+YSPTSP+Y SP+SP+YSP+SP S SP+YSP+SP SP S
Sbjct: 1603 SPGFSPASPAFGPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPNLSPAS 1662
Query: 365 TGYSPSQPGYSPSS 324
+SP+ P YSP+S
Sbjct: 1663 PVFSPTSPSYSPTS 1676
Score = 84.3 bits (207), Expect = 5e-15
Identities = 47/94 (50%), Positives = 60/94 (63%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSPYSPTSPN------------YSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSGVS 405
SPSS YSPTSP +SP SP++ PTSP+YSP+SP Y SP+SP S S
Sbjct: 1582 SPSSSYSPTSPGMGITSPRMTSPGFSPASPAFGPTSPAYSPTSPAYGQASPTSPSYSPTS 1641
Query: 404 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
P +SP+SP +SP S SP+ P +SP+S S Y+P
Sbjct: 1642 PGFSPTSPNYSPTSPNLSPASPVFSPTSPS-YSP 1674
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/105 (44%), Positives = 61/105 (58%), Gaps = 30/105 (28%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY---------NSGVSPDYSP 390
SP+SP +SPTSPNYSPTSP+ SP SP +SP+SP+YSP+SP S SP Y+P
Sbjct: 1638 SPTSPGFSPTSPNYSPTSPNLSPASPVFSPTSPSYSPTSPALGAGRNMSPTSPTSPKYTP 1697
Query: 389 SSPQFSPST--------------------GYSPSQPGYSPSSTSQ 315
+SP +SP++ YSP+ P YSP+S Q
Sbjct: 1698 TSPGWSPTSPQSYSPTSPNIGGSPTSPGGAYSPTSPTYSPTSPRQ 1742
Score = 84.0 bits (206), Expect = 6e-15
Identities = 50/94 (53%), Positives = 62/94 (65%), Gaps = 16/94 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTY---------SPSSPYNSGVSPDYSP 390
SP+SP YSPTSPN SP SP +SPTSPSYSP+SP SP+SP + SP +SP
Sbjct: 1645 SPTSPNYSPTSPNLSPASPVFSPTSPSYSPTSPALGAGRNMSPTSPTSPKYTPTSPGWSP 1704
Query: 389 SSPQF----SPSTGYSPSQPG--YSPSSTSQYTP 306
+SPQ SP+ G SP+ PG YSP+S + Y+P
Sbjct: 1705 TSPQSYSPTSPNIGGSPTSPGGAYSPTSPT-YSP 1737
[185][TOP]
>UniRef100_C6F0A4 RNA polymerase II (Fragment) n=2 Tax=Plasmodium (Laverania)
RepID=C6F0A4_PLAFA
Length = 202
Score = 93.2 bits (230), Expect = 1e-17
Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST--G 360
S YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP++
Sbjct: 44 SPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVA 103
Query: 359 YSPSQPGYSPSS 324
+ + P YSP S
Sbjct: 104 QNIASPNYSPYS 115
Score = 92.4 bits (228), Expect = 2e-17
Identities = 45/77 (58%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 37 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 96
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P ++ Y+P
Sbjct: 97 SPTSPVAQNIASPNYSP 113
Score = 90.9 bits (224), Expect = 5e-17
Identities = 44/71 (61%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
+S Y+ SP YS TSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 30 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 89
Query: 356 SPSQPGYSPSS 324
SP+ P YSP+S
Sbjct: 90 SPTSPKYSPTS 100
Score = 80.5 bits (197), Expect = 7e-14
Identities = 48/99 (48%), Positives = 57/99 (57%), Gaps = 26/99 (26%)
Frame = -2
Query: 524 YSPTSPNY-------SPTSPS------------------YSPTSPSYSPSSPTYSPSSPY 420
YSPTSP Y SPTSP YS TSP YSP+SP YSP+SP
Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60
Query: 419 NSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
S SP YSP+SP++SP S YSP+ P YSP+S +Y+P
Sbjct: 61 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 98
Score = 76.3 bits (186), Expect = 1e-12
Identities = 46/97 (47%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGVSPDY 396
SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YS +SP S SP Y
Sbjct: 69 SPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAY 128
Query: 395 SPSSPQFSPS---TGYSPSQPGYSPSSTSQYTPQTND 294
S SSP + S + P P Y S Q D
Sbjct: 129 SISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 165
[186][TOP]
>UniRef100_B8M2Y2 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC 10500
RepID=B8M2Y2_TALSN
Length = 1755
Score = 93.2 bits (230), Expect = 1e-17
Identities = 51/101 (50%), Positives = 60/101 (59%), Gaps = 23/101 (22%)
Frame = -2
Query: 539 SPSSP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SPSSP YSPTSP+Y SPSYSPTSP +SPSSP YSPSSP S SP +SP+S
Sbjct: 1607 SPSSPNFQTTSPAYSPTSPSYQQASPSYSPTSPRFSPSSPNYSPSSPNMSLSSPAFSPTS 1666
Query: 383 PQFSP---------------STGYSPSQPGYSPSSTSQYTP 306
P +SP S YSP+ P +SP+S Y+P
Sbjct: 1667 PTYSPTSPAIGGTRQFSSPTSPKYSPASPAWSPTSPEIYSP 1707
Score = 90.1 bits (222), Expect = 9e-17
Identities = 47/95 (49%), Positives = 61/95 (64%), Gaps = 6/95 (6%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS-PSTGY 357
S +SP+SPN+ TSP+YSPTSPSY +SP+YSP+SP S SP+YSPSSP S S +
Sbjct: 1603 SPGFSPSSPNFQTTSPAYSPTSPSYQQASPSYSPTSPRFSPSSPNYSPSSPNMSLSSPAF 1662
Query: 356 SPSQPGYSPSS-----TSQYTPQTNDKDERGKD*W 267
SP+ P YSP+S T Q++ T+ K W
Sbjct: 1663 SPTSPTYSPTSPAIGGTRQFSSPTSPKYSPASPAW 1697
Score = 79.0 bits (193), Expect = 2e-13
Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 25/103 (24%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-------YNSGVSPDYSPSS 384
SP+SP +SP+SPNYSP+SP+ S +SP++SP+SPTYSP+SP ++S SP YSP+S
Sbjct: 1635 SPTSPRFSPSSPNYSPSSPNMSLSSPAFSPTSPTYSPTSPAIGGTRQFSSPTSPKYSPAS 1694
Query: 383 PQFSPSTGY-----------SPSQP---GYSPS---STSQYTP 306
P +SP++ SP+ P G SPS ++ QY P
Sbjct: 1695 PAWSPTSPEIYSPTSPNIHGSPTSPARGGTSPSYSPTSPQYNP 1737
Score = 75.5 bits (184), Expect = 2e-12
Identities = 42/82 (51%), Positives = 53/82 (64%), Gaps = 11/82 (13%)
Frame = -2
Query: 539 SPSSPY--------SPTSPNYSPTSPSYSPTSPS-YSPSSPTY--SPSSPYNSGVSPDYS 393
SP+SP SPTSP YSP SP++SPTSP YSP+SP SP+SP G SP YS
Sbjct: 1670 SPTSPAIGGTRQFSSPTSPKYSPASPAWSPTSPEIYSPTSPNIHGSPTSPARGGTSPSYS 1729
Query: 392 PSSPQFSPSTGYSPSQPGYSPS 327
P+SPQ++P+ Y + PG P+
Sbjct: 1730 PTSPQYNPT--YVYTNPGEVPA 1749
Score = 75.1 bits (183), Expect = 3e-12
Identities = 48/97 (49%), Positives = 60/97 (61%), Gaps = 26/97 (26%)
Frame = -2
Query: 539 SPSSP-YSPTSPN-------YSPTSPSYSPTSPSY-------SPSSPTYSPSSPYNSGVS 405
SPSSP YSP+SPN +SPTSP+YSPTSP+ SP+SP YSP+SP S S
Sbjct: 1642 SPSSPNYSPSSPNMSLSSPAFSPTSPTYSPTSPAIGGTRQFSSPTSPKYSPASPAWSPTS 1701
Query: 404 PD-YSPSSPQF-----SPSTG-----YSPSQPGYSPS 327
P+ YSP+SP SP+ G YSP+ P Y+P+
Sbjct: 1702 PEIYSPTSPNIHGSPTSPARGGTSPSYSPTSPQYNPT 1738
Score = 63.9 bits (154), Expect = 7e-09
Identities = 41/77 (53%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
Frame = -2
Query: 539 SPSSP--YSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
+P SP YSPTSP N SP SP YSP+S SYSP+SP S +SP SP +SPSSP F
Sbjct: 1558 APQSPGGYSPTSPFNTSPVSPGYSPSS-SYSPASPGMSITSP-RFVTSPGFSPSSPNFQT 1615
Query: 368 STGYSPSQPGYSPSSTS 318
++ P YSP+S S
Sbjct: 1616 TS------PAYSPTSPS 1626
[187][TOP]
>UniRef100_P14248 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Plasmodium
falciparum CDC/Honduras RepID=RPB1_PLAFD
Length = 2452
Score = 93.2 bits (230), Expect = 1e-17
Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST--G 360
S YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP++
Sbjct: 2294 SPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVA 2353
Query: 359 YSPSQPGYSPSS 324
+ + P YSP S
Sbjct: 2354 QNIASPNYSPYS 2365
Score = 92.4 bits (228), Expect = 2e-17
Identities = 45/77 (58%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 2287 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2346
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P ++ Y+P
Sbjct: 2347 SPTSPVAQNIASPNYSP 2363
Score = 90.9 bits (224), Expect = 5e-17
Identities = 44/71 (61%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
+S Y+ SP YS TSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 2280 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2339
Query: 356 SPSQPGYSPSS 324
SP+ P YSP+S
Sbjct: 2340 SPTSPKYSPTS 2350
Score = 76.3 bits (186), Expect = 1e-12
Identities = 46/97 (47%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGVSPDY 396
SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YS +SP S SP Y
Sbjct: 2319 SPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAY 2378
Query: 395 SPSSPQFSPS---TGYSPSQPGYSPSSTSQYTPQTND 294
S SSP + S + P P Y S Q D
Sbjct: 2379 SISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 2415
Score = 74.7 bits (182), Expect = 4e-12
Identities = 42/88 (47%), Positives = 53/88 (60%), Gaps = 12/88 (13%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPS-----------YSPSSPTYSPSSPYNSGVSPDYSPS 387
S YSPTSP Y+ + YSPTSP Y+ SP YS +SP S SP YSP+
Sbjct: 2248 SPSYSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPT 2307
Query: 386 SPQFSP-STGYSPSQPGYSPSSTSQYTP 306
SP++SP S YSP+ P YSP+S +Y+P
Sbjct: 2308 SPKYSPTSPKYSPTSPKYSPTS-PKYSP 2334
Score = 74.3 bits (181), Expect = 5e-12
Identities = 45/110 (40%), Positives = 58/110 (52%), Gaps = 33/110 (30%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPS--------------------------------YSPTSPSYSP 453
P ++ SP+YSPTSP+ YS TSP YSP
Sbjct: 2240 PQINHNIYSPSYSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSP 2299
Query: 452 SSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
+SP YSP+SP S SP YSP+SP++SP S YSP+ P YSP+S +Y+P
Sbjct: 2300 TSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 2348
[188][TOP]
>UniRef100_B2W4S0 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2W4S0_PYRTR
Length = 1742
Score = 92.8 bits (229), Expect = 1e-17
Identities = 51/83 (61%), Positives = 60/83 (72%), Gaps = 5/83 (6%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSY-SPTSPSYSPSSPT-YSPSSPYNSGVSPDYSPSSPQF--- 375
SP SPTSP+YSPTSP Y SPTSPSYSP+SP YSP+SP S SP+YSP+SP F
Sbjct: 1600 SPGYMASPTSPHYSPTSPRYGSPTSPSYSPTSPAGYSPTSPQYSPTSPNYSPTSPTFMGG 1659
Query: 374 SPSTGYSPSQPGYSPSSTSQYTP 306
+ S YSP+ P YSP+S QY+P
Sbjct: 1660 ATSPAYSPTSPQYSPTS-PQYSP 1681
Score = 89.0 bits (219), Expect = 2e-16
Identities = 49/87 (56%), Positives = 59/87 (67%), Gaps = 15/87 (17%)
Frame = -2
Query: 539 SPSSP--YSPTSPNYSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGVSPDYSPSSPQF- 375
SP+SP YSPTSP YSPTSP+YSPTSP++ +SP YSP+SP S SP YSP+SPQ+
Sbjct: 1628 SPTSPAGYSPTSPQYSPTSPNYSPTSPTFMGGATSPAYSPTSPQYSPTSPQYSPTSPQYQ 1687
Query: 374 ------SP----STGYSPSQPGYSPSS 324
SP S YSP+ P YSP+S
Sbjct: 1688 ATSDRRSPTSPTSPQYSPTSPRYSPTS 1714
Score = 87.0 bits (214), Expect = 8e-16
Identities = 48/77 (62%), Positives = 56/77 (72%), Gaps = 5/77 (6%)
Frame = -2
Query: 539 SPSSPY--SPTSPNYSPTSPS-YSPTSPSYSPSSPTYSPSSPYNSG--VSPDYSPSSPQF 375
SP+SP SPTSP+YSPTSP+ YSPTSP YSP+SP YSP+SP G SP YSP+SPQ
Sbjct: 1613 SPTSPRYGSPTSPSYSPTSPAGYSPTSPQYSPTSPNYSPTSPTFMGGATSPAYSPTSPQ- 1671
Query: 374 SPSTGYSPSQPGYSPSS 324
YSP+ P YSP+S
Sbjct: 1672 -----YSPTSPQYSPTS 1683
Score = 84.7 bits (208), Expect = 4e-15
Identities = 54/100 (54%), Positives = 60/100 (60%), Gaps = 25/100 (25%)
Frame = -2
Query: 539 SPSSP-YSPTSPN---------YSPTSPSYSPTSPSYSPSSPTY----------SPSSPY 420
SP+SP YSPTSP YSPTSP YSPTSP YSP+SP Y SP+SP
Sbjct: 1643 SPTSPNYSPTSPTFMGGATSPAYSPTSPQYSPTSPQYSPTSPQYQATSDRRSPTSPTSPQ 1702
Query: 419 NSGVSPDYSPSSP--QFSP-STGYSPSQPG--YSPSSTSQ 315
S SP YSP+SP FSP S YSP+ PG YSP+S Q
Sbjct: 1703 YSPTSPRYSPTSPAGSFSPTSPRYSPTSPGPAYSPTSPKQ 1742
Score = 84.7 bits (208), Expect = 4e-15
Identities = 43/84 (51%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST--- 363
S YSPTSP YSPTSP YSPTSP Y +S SP+SP SP YSP+SP++SP++
Sbjct: 1662 SPAYSPTSPQYSPTSPQYSPTSPQYQATSDRRSPTSP----TSPQYSPTSPRYSPTSPAG 1717
Query: 362 GYSPSQPGYSPSSTSQYTPQTNDK 291
+SP+ P YSP+S T+ K
Sbjct: 1718 SFSPTSPRYSPTSPGPAYSPTSPK 1741
Score = 77.0 bits (188), Expect = 8e-13
Identities = 44/87 (50%), Positives = 52/87 (59%), Gaps = 15/87 (17%)
Frame = -2
Query: 521 SPTSPNYSPTSPSYSPTSPS--------------YSPSSPTYSPSSP-YNSGVSPDYSPS 387
SP SP +SPTSP YSPTSP SP+SP YSP+SP Y S SP YSP+
Sbjct: 1571 SPVSPGFSPTSPGYSPTSPGTASPRFAATSPGYMASPTSPHYSPTSPRYGSPTSPSYSPT 1630
Query: 386 SPQFSPSTGYSPSQPGYSPSSTSQYTP 306
SP GYSP+ P YSP+S + Y+P
Sbjct: 1631 SP-----AGYSPTSPQYSPTSPN-YSP 1651
[189][TOP]
>UniRef100_A7EKT1 DNA-directed RNA polymerase n=2 Tax=Sclerotinia sclerotiorum
RepID=A7EKT1_SCLS1
Length = 1746
Score = 92.8 bits (229), Expect = 1e-17
Identities = 54/103 (52%), Positives = 63/103 (61%), Gaps = 31/103 (30%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSP---------SYSPTSPSYSPSSPTYSPSSPYNSG------- 411
SP+SP YSPTSPNYSPTSP SYSPTSPSYSP+SP YSP+SP +G
Sbjct: 1631 SPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGS 1690
Query: 410 ----VSPDYSPSSPQFSPST----------GYSPSQPGYSPSS 324
SP YSP+SP +SPS+ YSP+ P YSP+S
Sbjct: 1691 GLSPTSPVYSPTSPNWSPSSPQHQGNNTSPKYSPTSPSYSPTS 1733
Score = 91.3 bits (225), Expect = 4e-17
Identities = 51/99 (51%), Positives = 65/99 (65%), Gaps = 16/99 (16%)
Frame = -2
Query: 539 SPSSP--YSPTSPNYSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGVSPDYSPSSPQF- 375
SP+SP SPTSP+YSPTSP+YSPTSP+ SP+SP+YSP+SP S SP+YSP+SP +
Sbjct: 1623 SPTSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYA 1682
Query: 374 ----SPSTG-------YSPSQPGYSPSSTSQYTPQTNDK 291
SP +G YSP+ P +SPSS T+ K
Sbjct: 1683 GNKVSPGSGLSPTSPVYSPTSPNWSPSSPQHQGNNTSPK 1721
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/87 (54%), Positives = 61/87 (70%), Gaps = 15/87 (17%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSY-----------SPSSPTYSPSSPYNSGVSPDY 396
SP+SP YSPTSP+YSPTSP+YSPTSP+Y SP+SP YSP+SP S SP +
Sbjct: 1654 SPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTSPVYSPTSPNWSPSSPQH 1713
Query: 395 --SPSSPQFSP-STGYSPSQPGYSPSS 324
+ +SP++SP S YSP+ P +SP+S
Sbjct: 1714 QGNNTSPKYSPTSPSYSPTSPNFSPTS 1740
Score = 82.0 bits (201), Expect = 2e-14
Identities = 48/112 (42%), Positives = 64/112 (57%), Gaps = 34/112 (30%)
Frame = -2
Query: 539 SPSSPY--SPTSPNYSPTSPSYSPT---------------------SPSYSPSSPTYSPS 429
SP+SP+ SPTSP +SP+SP YSPT SP+++P+SP YSP+
Sbjct: 1566 SPTSPFNASPTSPQFSPSSPGYSPTSPMMGGGASPGYSVSPRFSPVSPAFTPTSPAYSPT 1625
Query: 428 SP-YNSGVSPDYSPSSPQFSP----------STGYSPSQPGYSPSSTSQYTP 306
SP + S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1626 SPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPN-YSP 1676
Score = 79.3 bits (194), Expect = 2e-13
Identities = 47/98 (47%), Positives = 58/98 (59%), Gaps = 17/98 (17%)
Frame = -2
Query: 539 SPSSPYSPTSP-NYSPTSPSYSPTSPSYSPS--------------SPTYSPSSPYNSGVS 405
SP YSPTSP N SPTSP +SP+SP YSP+ SP +SP SP + S
Sbjct: 1560 SPGGGYSPTSPFNASPTSPQFSPSSPGYSPTSPMMGGGASPGYSVSPRFSPVSPAFTPTS 1619
Query: 404 PDYSPSSPQF-SP-STGYSPSQPGYSPSSTSQYTPQTN 297
P YSP+SP F SP S YSP+ P YSP+S + + T+
Sbjct: 1620 PAYSPTSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTS 1657
Score = 70.1 bits (170), Expect = 1e-10
Identities = 40/75 (53%), Positives = 48/75 (64%), Gaps = 21/75 (28%)
Frame = -2
Query: 539 SPSSP-YSPTSPNY-----------SPTSPSYSPTSPSYSPSSPT---------YSPSSP 423
SP+SP YSPTSPNY SPTSP YSPTSP++SPSSP YSP+SP
Sbjct: 1668 SPTSPNYSPTSPNYAGNKVSPGSGLSPTSPVYSPTSPNWSPSSPQHQGNNTSPKYSPTSP 1727
Query: 422 YNSGVSPDYSPSSPQ 378
S SP++SP+SP+
Sbjct: 1728 SYSPTSPNFSPTSPR 1742
[190][TOP]
>UniRef100_A6SI63 DNA-directed RNA polymerase n=1 Tax=Botryotinia fuckeliana B05.10
RepID=A6SI63_BOTFB
Length = 1742
Score = 92.8 bits (229), Expect = 1e-17
Identities = 54/103 (52%), Positives = 63/103 (61%), Gaps = 31/103 (30%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSP---------SYSPTSPSYSPSSPTYSPSSPYNSG------- 411
SP+SP YSPTSPNYSPTSP SYSPTSPSYSP+SP YSP+SP +G
Sbjct: 1627 SPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGS 1686
Query: 410 ----VSPDYSPSSPQFSPST----------GYSPSQPGYSPSS 324
SP YSP+SP +SPS+ YSP+ P YSP+S
Sbjct: 1687 GLSPTSPVYSPTSPNWSPSSPQHQGNSTSPKYSPTSPSYSPTS 1729
Score = 91.3 bits (225), Expect = 4e-17
Identities = 51/99 (51%), Positives = 65/99 (65%), Gaps = 16/99 (16%)
Frame = -2
Query: 539 SPSSP--YSPTSPNYSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGVSPDYSPSSPQF- 375
SP+SP SPTSP+YSPTSP+YSPTSP+ SP+SP+YSP+SP S SP+YSP+SP +
Sbjct: 1619 SPTSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYA 1678
Query: 374 ----SPSTG-------YSPSQPGYSPSSTSQYTPQTNDK 291
SP +G YSP+ P +SPSS T+ K
Sbjct: 1679 GNKVSPGSGLSPTSPVYSPTSPNWSPSSPQHQGNSTSPK 1717
Score = 82.8 bits (203), Expect = 1e-14
Identities = 48/112 (42%), Positives = 65/112 (58%), Gaps = 34/112 (30%)
Frame = -2
Query: 539 SPSSPY--SPTSPNYSPTSPSYSPT---------------------SPSYSPSSPTYSPS 429
SP+SP+ SP+SPN+SP+SP YSPT SP+++P+SP YSP+
Sbjct: 1562 SPTSPFNASPSSPNFSPSSPGYSPTSPMMGGGASPGYAVSPRFSPVSPAFTPTSPAYSPT 1621
Query: 428 SP-YNSGVSPDYSPSSPQFSP----------STGYSPSQPGYSPSSTSQYTP 306
SP + S SP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1622 SPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPN-YSP 1672
Score = 76.6 bits (187), Expect = 1e-12
Identities = 43/79 (54%), Positives = 52/79 (65%), Gaps = 7/79 (8%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPS----YSPTSPSYSPSSPTYSPSSPYNSG--VSPDYSPSSP 381
SP+SP YSPTSPNY+ S SPTSP YSP+SP +SPSSP + G SP YSP+SP
Sbjct: 1664 SPTSPNYSPTSPNYAGNKVSPGSGLSPTSPVYSPTSPNWSPSSPQHQGNSTSPKYSPTSP 1723
Query: 380 QFSPSTGYSPSQPGYSPSS 324
YSP+ P +SP+S
Sbjct: 1724 ------SYSPTSPNFSPTS 1736
Score = 63.9 bits (154), Expect = 7e-09
Identities = 32/49 (65%), Positives = 37/49 (75%), Gaps = 10/49 (20%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSP---------TSPSYSPTSPSYSPSSPTYSPSSP 423
SP+SP YSPTSPN+SP TSP YSPTSPSYSP+SP +SP+SP
Sbjct: 1689 SPTSPVYSPTSPNWSPSSPQHQGNSTSPKYSPTSPSYSPTSPNFSPTSP 1737
[191][TOP]
>UniRef100_C6F1F6 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F6_PLAVI
Length = 211
Score = 91.7 bits (226), Expect = 3e-17
Identities = 45/70 (64%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY- 357
S YS TSP SPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SPQ+SPS+
Sbjct: 53 SPVYSVTSPKXSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVP 112
Query: 356 -SPSQPGYSP 330
+PS P YSP
Sbjct: 113 NNPSSPHYSP 122
Score = 83.2 bits (204), Expect = 1e-14
Identities = 42/74 (56%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 348
+S SP YS TSP SPTSP YSP+SP YSP+SP S SP YSP+SP++SP S YSPS
Sbjct: 49 HSVVSPVYSVTSPKXSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPS 108
Query: 347 QPGYSPSSTSQYTP 306
P + S+ Y+P
Sbjct: 109 SPVPNNPSSPHYSP 122
Score = 73.9 bits (180), Expect = 7e-12
Identities = 44/99 (44%), Positives = 53/99 (53%), Gaps = 21/99 (21%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPS--------------------YSPTSPSYSPSSPTYSPSSPYNS 414
SS + T YSPTSP+ YS TSP SP+SP YSP+SP S
Sbjct: 19 SSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKXSPTSPKYSPTSPKYS 78
Query: 413 GVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 300
SP YSP+SP++SP S YSP+ P YSPSS P +
Sbjct: 79 PTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSS 117
Score = 57.0 bits (136), Expect = 8e-07
Identities = 44/118 (37%), Positives = 52/118 (44%), Gaps = 29/118 (24%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSP-------------------------SSPTY 438
SP+SP YSPTSP YSPTSP YSPTSP YSP +SP Y
Sbjct: 78 SPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSPYAIASPKFSPTSPAY 137
Query: 437 SPSSPYNSGVSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTP--QTNDKDERGKD 273
S SSP S S SP+ SP Q S ++P Q N ++ + D
Sbjct: 138 SISSPVYDQSGNARSKSQHPLSPAYILQSPVQVKQHIQDVSVFSPIQQANAEEVQNDD 195
[192][TOP]
>UniRef100_C6F1F5 RNA polymerase II (Fragment) n=1 Tax=Plasmodium fragile
RepID=C6F1F5_PLAFR
Length = 210
Score = 91.7 bits (226), Expect = 3e-17
Identities = 44/70 (62%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY- 357
S YS TSP YSPTSP YSPTSP Y P+SP YSP+SP S SP YSP+SPQ+SP++
Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPIP 112
Query: 356 -SPSQPGYSP 330
+PS P YSP
Sbjct: 113 NNPSSPHYSP 122
Score = 89.4 bits (220), Expect = 2e-16
Identities = 49/81 (60%), Positives = 58/81 (71%), Gaps = 6/81 (7%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY-NSGVSPDYSP---SSPQF 375
SP+SP Y PTSP YSPTSP YSPTSP YSP+SP YSP+SP N+ SP YSP +SP+F
Sbjct: 71 SPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPIPNNPSSPHYSPYAIASPKF 130
Query: 374 SP-STGYSPSQPGYSPSSTSQ 315
SP S YS S P Y S+ ++
Sbjct: 131 SPTSPAYSISSPVYDRSANAR 151
Score = 82.8 bits (203), Expect = 1e-14
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 348
+S SP YS TSP YSPTSP YSP+SP Y P+SP S SP YSP+SP++SP S YSP+
Sbjct: 49 HSVVSPVYSVTSPKYSPTSPKYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPT 108
Query: 347 QPGYSPSSTSQYTP 306
P + S+ Y+P
Sbjct: 109 SPIPNNPSSPHYSP 122
Score = 72.8 bits (177), Expect = 1e-11
Identities = 46/117 (39%), Positives = 55/117 (47%), Gaps = 42/117 (35%)
Frame = -2
Query: 524 YSPTSPN---------------------YSPTSPS--------------------YSPTS 468
YSPTSP YSPTSP+ YS TS
Sbjct: 1 YSPTSPTYHLSNNANAGGSAGLNDPKSFYSPTSPTNQLGEMNPNMMKYHSVVSPVYSVTS 60
Query: 467 PSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQT 300
P YSP+SP YSP+SP SP YSP+SP++SP S YSP+ P YSP+S P +
Sbjct: 61 PKYSPTSPKYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPIPNNPSS 117
[193][TOP]
>UniRef100_C9SR21 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Verticillium
albo-atrum VaMs.102 RepID=C9SR21_9PEZI
Length = 1756
Score = 91.3 bits (225), Expect = 4e-17
Identities = 51/88 (57%), Positives = 63/88 (71%), Gaps = 14/88 (15%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPS---YSPTSPSYSPSSPT----YSPSSP--YNSGVSPDYSP 390
SPSSP +SPTSP + PTSP+ YSPTSPSYSP+SPT YSP+SP +NS SP YSP
Sbjct: 1608 SPSSPSFSPTSPVHRPTSPASPNYSPTSPSYSPTSPTSPRHYSPTSPAQFNSPTSPSYSP 1667
Query: 389 SSPQFSPST----GYSPSQPGYSPSSTS 318
+SP +SP++ G P+ P YSP+S S
Sbjct: 1668 ASPSYSPTSPNLHGAGPTSPSYSPASPS 1695
Score = 85.9 bits (211), Expect = 2e-15
Identities = 54/122 (44%), Positives = 69/122 (56%), Gaps = 34/122 (27%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSY-------------SPTSPSYSPSSPTYSPSSPYNSG--- 411
SP+SP YSPTSP+YSPTSP+ SPTSPSYSP+SP+YSP+SP G
Sbjct: 1625 SPASPNYSPTSPSYSPTSPTSPRHYSPTSPAQFNSPTSPSYSPASPSYSPTSPNLHGAGP 1684
Query: 410 VSPDYSPSSPQFSPST-----------------GYSPSQPGYSPSSTSQYTPQTNDKDER 282
SP YSP+SP +SP++ SP+ P YSP+S S ++P+T
Sbjct: 1685 TSPSYSPASPSWSPTSPEHSYSPTSPSFQRPAMQQSPTSPNYSPTSPS-FSPRTPGPSGS 1743
Query: 281 GK 276
GK
Sbjct: 1744 GK 1745
Score = 58.9 bits (141), Expect = 2e-07
Identities = 40/85 (47%), Positives = 51/85 (60%), Gaps = 9/85 (10%)
Frame = -2
Query: 533 SSPY--SPTSPNYS-PTSPSYSPTSPS--YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
+SP+ SPTSP S + YSPTSP YSP+SP + Y SP +SPSSP FSP
Sbjct: 1559 TSPFTTSPTSPFSSFAGAGGYSPTSPGGGYSPTSPLMDGGARY--ATSPQFSPSSPSFSP 1616
Query: 368 STGY----SPSQPGYSPSSTSQYTP 306
++ SP+ P YSP+S S Y+P
Sbjct: 1617 TSPVHRPTSPASPNYSPTSPS-YSP 1640
[194][TOP]
>UniRef100_Q4P7Q0 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis
RepID=Q4P7Q0_USTMA
Length = 1774
Score = 90.9 bits (224), Expect = 5e-17
Identities = 52/101 (51%), Positives = 61/101 (60%), Gaps = 16/101 (15%)
Frame = -2
Query: 533 SSPYSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSP-------------YNSGVSPD 399
S YSPTSP TSPSYSPTSPSYSP+SP YSPSSP Y + SP
Sbjct: 1591 SPAYSPTSPRIFGGATSPSYSPTSPSYSPASPNYSPSSPAGAGYSPSSPAGRYGAATSPQ 1650
Query: 398 YSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPQTNDKDERG 279
YSP+SP+FSP S YSP+ P Y+P+S Y+P + RG
Sbjct: 1651 YSPASPKFSPTSPNYSPASPAYTPTS-PVYSPTSPAMAGRG 1690
Score = 87.8 bits (216), Expect = 4e-16
Identities = 47/92 (51%), Positives = 61/92 (66%), Gaps = 14/92 (15%)
Frame = -2
Query: 539 SPSSP-----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVS--PD 399
SPSSP YSP SP +SPTSP+YSP SP+Y+P+SP YSP+SP +G
Sbjct: 1635 SPSSPAGRYGAATSPQYSPASPKFSPTSPNYSPASPAYTPTSPVYSPTSPAMAGRGGGKG 1694
Query: 398 YSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
+SP+SP +SP S YSP+ P +SP+S QY+P
Sbjct: 1695 FSPTSPAYSPTSPQYSPASPAFSPTS-PQYSP 1725
Score = 84.7 bits (208), Expect = 4e-15
Identities = 48/102 (47%), Positives = 59/102 (57%), Gaps = 24/102 (23%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSP--------------------TSPSYSPTSPSYSPSSPTYSPSSP 423
SP+SP YSP SPNYSP TSP YSP SP +SP+SP YSP+SP
Sbjct: 1611 SPTSPSYSPASPNYSPSSPAGAGYSPSSPAGRYGAATSPQYSPASPKFSPTSPNYSPASP 1670
Query: 422 YNSGVSPDYSPSSPQFS---PSTGYSPSQPGYSPSSTSQYTP 306
+ SP YSP+SP + G+SP+ P YSP+S QY+P
Sbjct: 1671 AYTPTSPVYSPTSPAMAGRGGGKGFSPTSPAYSPTS-PQYSP 1711
Score = 79.7 bits (195), Expect = 1e-13
Identities = 42/82 (51%), Positives = 51/82 (62%), Gaps = 10/82 (12%)
Frame = -2
Query: 539 SPSSP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSP 390
SP+SP +SPTSP YSPTSP YSP SP++SP+SP YSP+SP S SP YSP
Sbjct: 1680 SPTSPAMAGRGGGKGFSPTSPAYSPTSPQYSPASPAFSPTSPQYSPASPQYSPTSPQYSP 1739
Query: 389 SSPQFSPSTGYSPSQPGYSPSS 324
+SP G S PG + +S
Sbjct: 1740 TSPAMGMG-GASAGGPGAAAAS 1760
Score = 70.5 bits (171), Expect = 7e-11
Identities = 42/96 (43%), Positives = 49/96 (51%), Gaps = 24/96 (25%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPS------------------SPTYSPSSP--Y 420
+P SP +SP SP Y PTSP Y+ S SP YSP+SP +
Sbjct: 1543 TPLGAQSPAGYGFSPVSPGYVPTSPGYATSPAGALGGMSPWTGNMGATSPAYSPTSPRIF 1602
Query: 419 NSGVSPDYSPSSPQFSP-STGYSPSQP---GYSPSS 324
SP YSP+SP +SP S YSPS P GYSPSS
Sbjct: 1603 GGATSPSYSPTSPSYSPASPNYSPSSPAGAGYSPSS 1638
[195][TOP]
>UniRef100_UPI000023F34A hypothetical protein FG00916.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023F34A
Length = 1758
Score = 90.1 bits (222), Expect = 9e-17
Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 20/98 (20%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSY-------------SPTSPSYSPSSPTYSPSSPYNSG--- 411
SP+SP YSPTSP+YSPTSPS SPTSPSYSP+SP YSP+SP G
Sbjct: 1627 SPASPSYSPTSPSYSPTSPSSPRHYSPTSPAQFNSPTSPSYSPASPNYSPTSPNVHGAGG 1686
Query: 410 -VSPDYSPSSPQFSPST--GYSPSQPGYSPSSTSQYTP 306
SP YSP+SP +SP++ YSP+ P + S T+Q +P
Sbjct: 1687 PTSPSYSPASPSWSPTSPEAYSPTSPTFQRSPTTQQSP 1724
Score = 88.2 bits (217), Expect = 3e-16
Identities = 51/122 (41%), Positives = 66/122 (54%), Gaps = 44/122 (36%)
Frame = -2
Query: 539 SPSSP---------YSPTSPNYSPTSPSYSPTSP----------SYSPSSPTYSPSSP-- 423
SP+SP Y PTSP++SP+SPS+SPTSP SYSP+SP+YSP+SP
Sbjct: 1588 SPTSPLIDGGGMGRYGPTSPSFSPSSPSFSPTSPMLRPTSPASPSYSPTSPSYSPTSPSS 1647
Query: 422 -----------YNSGVSPDYSPSSPQFSP------------STGYSPSQPGYSPSSTSQY 312
+NS SP YSP+SP +SP S YSP+ P +SP+S Y
Sbjct: 1648 PRHYSPTSPAQFNSPTSPSYSPASPNYSPTSPNVHGAGGPTSPSYSPASPSWSPTSPEAY 1707
Query: 311 TP 306
+P
Sbjct: 1708 SP 1709
Score = 79.7 bits (195), Expect = 1e-13
Identities = 50/89 (56%), Positives = 56/89 (62%), Gaps = 15/89 (16%)
Frame = -2
Query: 539 SPSSP-YSPTSPNY----SPTSPSYSPTSPSYSPSSP-TYSPSSP--------YNSGVSP 402
SP+SP YSPTSPN PTSPSYSP SPS+SP+SP YSP+SP S SP
Sbjct: 1668 SPASPNYSPTSPNVHGAGGPTSPSYSPASPSWSPTSPEAYSPTSPTFQRSPTTQQSPTSP 1727
Query: 401 DYSPSSPQFSPST-GYSPSQPGYSPSSTS 318
YSP+SP FSP T G S YSP+S S
Sbjct: 1728 SYSPTSPAFSPRTPGPGTSGNQYSPNSPS 1756
Score = 77.0 bits (188), Expect = 8e-13
Identities = 50/103 (48%), Positives = 63/103 (61%), Gaps = 22/103 (21%)
Frame = -2
Query: 539 SPSSPYSPTSP-NYSPTSPS--YS---------------PTSPSYSPSSPTYSPSSPY-- 420
SP S SPTSP +YSPTSP+ YS PTSPS+SPSSP++SP+SP
Sbjct: 1565 SPFSSTSPTSPFSYSPTSPNMGYSPTSPLIDGGGMGRYGPTSPSFSPSSPSFSPTSPMLR 1624
Query: 419 -NSGVSPDYSPSSPQFSPSTGYSPSQP-GYSPSSTSQYTPQTN 297
S SP YSP+SP +SP+ SPS P YSP+S +Q+ T+
Sbjct: 1625 PTSPASPSYSPTSPSYSPT---SPSSPRHYSPTSPAQFNSPTS 1664
Score = 63.2 bits (152), Expect = 1e-08
Identities = 43/101 (42%), Positives = 53/101 (52%), Gaps = 25/101 (24%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSP-SYSPSSPT--YSPSSPYNSG--------VSPDYSPS 387
++P SP + + S SPTSP SYSP+SP YSP+SP G SP +SPS
Sbjct: 1553 TTPMSPYNRGAASPFSSTSPTSPFSYSPTSPNMGYSPTSPLIDGGGMGRYGPTSPSFSPS 1612
Query: 386 SPQFSP-----------STGYSPSQPGYSPSSTS---QYTP 306
SP FSP S YSP+ P YSP+S S Y+P
Sbjct: 1613 SPSFSPTSPMLRPTSPASPSYSPTSPSYSPTSPSSPRHYSP 1653
[196][TOP]
>UniRef100_C6F0A3 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0A3_PLAFA
Length = 195
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/72 (59%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST--G 360
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP++
Sbjct: 37 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVA 96
Query: 359 YSPSQPGYSPSS 324
+ + P YSP S
Sbjct: 97 QNIASPNYSPYS 108
Score = 85.5 bits (210), Expect = 2e-15
Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGY 357
+S Y+ SP YS TSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP S Y
Sbjct: 30 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 89
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P ++ Y+P
Sbjct: 90 SPTSPVAQNIASPNYSP 106
Score = 79.3 bits (194), Expect = 2e-13
Identities = 46/93 (49%), Positives = 53/93 (56%), Gaps = 26/93 (27%)
Frame = -2
Query: 524 YSPTSPNY-------SPTSPS------------------YSPTSPSYSPSSPTYSPSSPY 420
YSPTSP Y SPTSP YS TSP YSP+SP YSP+SP
Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60
Query: 419 NSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSS 324
S SP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 61 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 93
Score = 76.3 bits (186), Expect = 1e-12
Identities = 46/97 (47%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGVSPDY 396
SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YS +SP S SP Y
Sbjct: 62 SPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAY 121
Query: 395 SPSSPQFSPS---TGYSPSQPGYSPSSTSQYTPQTND 294
S SSP + S + P P Y S Q D
Sbjct: 122 SISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 158
[197][TOP]
>UniRef100_B0DB45 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0DB45_LACBS
Length = 1742
Score = 89.0 bits (219), Expect = 2e-16
Identities = 45/77 (58%), Positives = 54/77 (70%), Gaps = 7/77 (9%)
Frame = -2
Query: 533 SSPY------SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 372
+SPY +PTSP YSPTSP+ + TSP YSP+SP YSP+SP S SP YSP SP FS
Sbjct: 1586 ASPYYDPSARNPTSPTYSPTSPALNLTSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFS 1645
Query: 371 P-STGYSPSQPGYSPSS 324
P S YSP+ P +SP+S
Sbjct: 1646 PTSPRYSPTSPSFSPAS 1662
Score = 83.2 bits (204), Expect = 1e-14
Identities = 40/60 (66%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP+SP + TSP YSPTSP YSPTSPS+SP+SP YSP SP S SP YSP+SP FSP++
Sbjct: 1603 SPTSPALNLTSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPSFSPAS 1662
Score = 76.3 bits (186), Expect = 1e-12
Identities = 46/106 (43%), Positives = 60/106 (56%), Gaps = 32/106 (30%)
Frame = -2
Query: 539 SPSSP--YSPTSPNYSPTSP----------------------SYSPTSPSYSPSSPT--- 441
SPSSP YSPTSP++ P SP + +PTSP+YSP+SP
Sbjct: 1552 SPSSPNVYSPTSPSFVPQSPFGGATSPFGTSPYAASPYYDPSARNPTSPTYSPTSPALNL 1611
Query: 440 ----YSPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 318
YSP+SP S SP +SP+SP++SP S +SP+ P YSP+S S
Sbjct: 1612 TSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPS 1657
Score = 70.5 bits (171), Expect = 7e-11
Identities = 34/55 (61%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SP+SP YSPTSP++SPTSP YSP SPS+SP+SP YSP+ SP +SP+SP+
Sbjct: 1617 SPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPT-------SPSFSPASPR 1664
Score = 67.8 bits (164), Expect = 5e-10
Identities = 32/51 (62%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSP 390
SP+SP +SPTSP YSP SPS+SPTSP YSP+SP++SP+SP +S Y P
Sbjct: 1624 SPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPSFSPASPRCKFLSIIYEP 1674
[198][TOP]
>UniRef100_Q8MX30 DNA-directed RNA polymerase (Fragment) n=1 Tax=Naegleria gruberi
RepID=Q8MX30_NAEGR
Length = 1590
Score = 88.2 bits (217), Expect = 3e-16
Identities = 41/58 (70%), Positives = 49/58 (84%), Gaps = 2/58 (3%)
Frame = -2
Query: 539 SPSSP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS 372
SPSSP YSPTSP YSP+SP+YSPTSP+YSP+SP YSP+SP S SP+YSP+SP +S
Sbjct: 1533 SPSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSPNYSPTSPAYSPTSPNYSPTSPAYS 1590
Score = 87.0 bits (214), Expect = 8e-16
Identities = 45/75 (60%), Positives = 54/75 (72%), Gaps = 6/75 (8%)
Frame = -2
Query: 539 SPSSP-----YSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
SP+SP YSP+SP NYSPTSP+YSP+SP+YSP+SP YSP+SP S SP YSP+SP
Sbjct: 1522 SPTSPGHQGGYSPSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSPNYSPTSPAYSPTSP- 1580
Query: 377 FSPSTGYSPSQPGYS 333
YSP+ P YS
Sbjct: 1581 -----NYSPTSPAYS 1590
Score = 71.6 bits (174), Expect = 3e-11
Identities = 42/77 (54%), Positives = 51/77 (66%), Gaps = 5/77 (6%)
Frame = -2
Query: 521 SPTSPN----YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
SPTSP YSP+SP +YSPTSP+YSPSSP YSP+SP YSP+SP Y
Sbjct: 1522 SPTSPGHQGGYSPSSPGNYSPTSPAYSPSSPNYSPTSPA-------YSPTSPN------Y 1568
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+S + Y+P
Sbjct: 1569 SPTSPAYSPTSPN-YSP 1584
Score = 61.2 bits (147), Expect = 4e-08
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN-SGVSPDYSPSSPQFSP-STGYSP 351
+SP+ N + + + SPTSP + YSPSSP N S SP YSPSSP +SP S YSP
Sbjct: 1507 FSPSPYNSAFSPVASSPTSPGHQGG---YSPSSPGNYSPTSPAYSPSSPNYSPTSPAYSP 1563
Query: 350 SQPGYSPSSTSQYTP 306
+ P YSP+S + Y+P
Sbjct: 1564 TSPNYSPTSPA-YSP 1577
[199][TOP]
>UniRef100_A5DCV1 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
RepID=A5DCV1_PICGU
Length = 224
Score = 88.2 bits (217), Expect = 3e-16
Identities = 45/81 (55%), Positives = 55/81 (67%), Gaps = 7/81 (8%)
Frame = -2
Query: 527 PYSPT---SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
P+ PT SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+SP +SP+
Sbjct: 124 PHHPTHLLSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPNVAQ 183
Query: 356 ----SPSQPGYSPSSTSQYTP 306
P+ Y PS + TP
Sbjct: 184 LLTNFPTVLTYFPSLLTHVTP 204
Score = 70.9 bits (172), Expect = 6e-11
Identities = 32/38 (84%), Positives = 37/38 (97%), Gaps = 1/38 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS 429
SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+
Sbjct: 143 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPN 180
[200][TOP]
>UniRef100_UPI000151A8B4 hypothetical protein PGUG_01106 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151A8B4
Length = 224
Score = 87.4 bits (215), Expect = 6e-16
Identities = 45/81 (55%), Positives = 54/81 (66%), Gaps = 7/81 (8%)
Frame = -2
Query: 527 PYSPT---SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
P+ PT SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP+SP +SP+
Sbjct: 124 PHHPTHLLSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPNVAQ 183
Query: 356 ----SPSQPGYSPSSTSQYTP 306
P+ Y PS + TP
Sbjct: 184 LLTNFPTVLTYFPSLLTHVTP 204
Score = 69.3 bits (168), Expect = 2e-10
Identities = 32/38 (84%), Positives = 36/38 (94%), Gaps = 1/38 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS 429
SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+
Sbjct: 143 SPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPN 180
[201][TOP]
>UniRef100_C6F0B0 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0B0_PLAFA
Length = 188
Score = 85.5 bits (210), Expect = 2e-15
Identities = 46/82 (56%), Positives = 52/82 (63%), Gaps = 12/82 (14%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSP--------SSPQ 378
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP +SP
Sbjct: 37 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPN 96
Query: 377 FSP----STGYSPSQPGYSPSS 324
+SP S +SP+ P YS SS
Sbjct: 97 YSPYSITSPKFSPTSPAYSISS 118
Score = 82.4 bits (202), Expect = 2e-14
Identities = 40/72 (55%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST--G 360
+S Y+ SP YS TSP YSPTSP YSP+SP YSP+SP S SP YSP+SP++SP++
Sbjct: 30 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVA 89
Query: 359 YSPSQPGYSPSS 324
+ + P YSP S
Sbjct: 90 QNIASPNYSPYS 101
Score = 79.0 bits (193), Expect = 2e-13
Identities = 47/104 (45%), Positives = 54/104 (51%), Gaps = 22/104 (21%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGV-SPDYSP-------- 390
SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP + SP+YSP
Sbjct: 48 SPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKF 107
Query: 389 ---------SSPQFSPS---TGYSPSQPGYSPSSTSQYTPQTND 294
SSP + S + P P Y S Q D
Sbjct: 108 SPTSPAYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 151
Score = 74.3 bits (181), Expect = 5e-12
Identities = 43/86 (50%), Positives = 51/86 (59%), Gaps = 19/86 (22%)
Frame = -2
Query: 524 YSPTSPNY-------SPTSP-----------SYSPTSPSYSPSSPTYSPSSPYNSGVSPD 399
YSPTSP Y SPTSP Y+ SP YS +SP YSP+SP S SP
Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60
Query: 398 YSPSSPQFSP-STGYSPSQPGYSPSS 324
YSP+SP++SP S YSP+ P YSP+S
Sbjct: 61 YSPTSPKYSPTSPKYSPTSPKYSPTS 86
[202][TOP]
>UniRef100_C7YI77 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7YI77_NECH7
Length = 1750
Score = 84.7 bits (208), Expect = 4e-15
Identities = 46/103 (44%), Positives = 60/103 (58%), Gaps = 27/103 (26%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPS---YSPSSPTYSPSSP-------------YNSGVSP 402
S +SP+SP++SPTSP PTSP+ YSPSSP YSP+SP +NS SP
Sbjct: 1600 SPSFSPSSPSFSPTSPMVRPTSPASPNYSPSSPNYSPASPSSPRHYSPTSPAQFNSPTSP 1659
Query: 401 DYSPSSPQFSP-----------STGYSPSQPGYSPSSTSQYTP 306
+YSP+SP +SP S YSP+ P +SP+S Y+P
Sbjct: 1660 NYSPASPNYSPASPNLHAGGTTSPSYSPASPTWSPTSPEAYSP 1702
Score = 82.4 bits (202), Expect = 2e-14
Identities = 49/94 (52%), Positives = 61/94 (64%), Gaps = 14/94 (14%)
Frame = -2
Query: 539 SPSSPY---SPTSPNYSPTSPSYSP----------TSPSYSPSSPTYSPSSPYNSGVSPD 399
SP+SP SPTSPNYSP SP+YSP TSPSYSP+SPT+SP+SP
Sbjct: 1646 SPTSPAQFNSPTSPNYSPASPNYSPASPNLHAGGTTSPSYSPASPTWSPTSP------EA 1699
Query: 398 YSPSSP-QFSPSTGYSPSQPGYSPSSTSQYTPQT 300
YSP+SP Q SP SP+ P YSP+S + ++P+T
Sbjct: 1700 YSPTSPYQRSPGAQQSPTSPSYSPTSPA-FSPRT 1732
Score = 80.9 bits (198), Expect = 5e-14
Identities = 48/97 (49%), Positives = 60/97 (61%), Gaps = 19/97 (19%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSY-------------SPTSPSYSPSSPTYSPSSP---YNSG 411
SP+SP YSP+SPNYSP SPS SPTSP+YSP+SP YSP+SP
Sbjct: 1621 SPASPNYSPSSPNYSPASPSSPRHYSPTSPAQFNSPTSPNYSPASPNYSPASPNLHAGGT 1680
Query: 410 VSPDYSPSSPQFSPST--GYSPSQPGYSPSSTSQYTP 306
SP YSP+SP +SP++ YSP+ P Y S +Q +P
Sbjct: 1681 TSPSYSPASPTWSPTSPEAYSPTSP-YQRSPGAQQSP 1716
Score = 79.7 bits (195), Expect = 1e-13
Identities = 45/86 (52%), Positives = 60/86 (69%), Gaps = 14/86 (16%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPS---YSPTSPSYSPSSPT----YSPSSP--YNSGVSPDYSP 390
SPSSP +SPTSP PTSP+ YSP+SP+YSP+SP+ YSP+SP +NS SP+YSP
Sbjct: 1604 SPSSPSFSPTSPMVRPTSPASPNYSPSSPNYSPASPSSPRHYSPTSPAQFNSPTSPNYSP 1663
Query: 389 SSPQFSPST----GYSPSQPGYSPSS 324
+SP +SP++ + P YSP+S
Sbjct: 1664 ASPNYSPASPNLHAGGTTSPSYSPAS 1689
Score = 67.8 bits (164), Expect = 5e-10
Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPS-YSPTSPSYS-------PSSPTYSPSSPY----------NS 414
SP+SP+ P YSPTSP+ YSPTSP +SP++SPSSP S
Sbjct: 1563 SPTSPFGPGG-GYSPTSPNAYSPTSPLVDGGMGGRYATSPSFSPSSPSFSPTSPMVRPTS 1621
Query: 413 GVSPDYSPSSPQFSPSTGYSPSQP-GYSPSSTSQYTPQTN 297
SP+YSPSSP +SP+ SPS P YSP+S +Q+ T+
Sbjct: 1622 PASPNYSPSSPNYSPA---SPSSPRHYSPTSPAQFNSPTS 1658
Score = 60.8 bits (146), Expect = 6e-08
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 9/62 (14%)
Frame = -2
Query: 539 SPSSP-YSPTSPN-YSPTSP-------SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS 387
SP+SP +SPTSP YSPTSP SPTSPSYSP+SP +SP +P YSP+
Sbjct: 1686 SPASPTWSPTSPEAYSPTSPYQRSPGAQQSPTSPSYSPTSPAFSPRTPGPGSSGNQYSPN 1745
Query: 386 SP 381
SP
Sbjct: 1746 SP 1747
Score = 59.7 bits (143), Expect = 1e-07
Identities = 45/101 (44%), Positives = 52/101 (51%), Gaps = 23/101 (22%)
Frame = -2
Query: 539 SPSSPYSPTSP-NYSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSG-------VSPDYSPS 387
SP + TSP SPTSP + P YSP+SP YSP+SP G SP +SPS
Sbjct: 1549 SPYAMRGGTSPFTTSPTSP-FGPGG-GYSPTSPNAYSPTSPLVDGGMGGRYATSPSFSPS 1606
Query: 386 SPQFSP-----------STGYSPSQPGYSPSSTS---QYTP 306
SP FSP S YSPS P YSP+S S Y+P
Sbjct: 1607 SPSFSPTSPMVRPTSPASPNYSPSSPNYSPASPSSPRHYSP 1647
Score = 57.8 bits (138), Expect = 5e-07
Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSP-SYSPTSP-------SYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
S YSP SP +SPTSP +YSPTSP SP+SP+YSP+SP S +P S Q
Sbjct: 1682 SPSYSPASPTWSPTSPEAYSPTSPYQRSPGAQQSPTSPSYSPTSPAFSPRTPGPGSSGNQ 1741
Query: 377 FSPST 363
+SP++
Sbjct: 1742 YSPNS 1746
[203][TOP]
>UniRef100_Q9FI54 Genomic DNA, chromosome 5, TAC clone:K3K7 n=1 Tax=Arabidopsis
thaliana RepID=Q9FI54_ARATH
Length = 314
Score = 82.0 bits (201), Expect = 2e-14
Identities = 53/140 (37%), Positives = 69/140 (49%), Gaps = 3/140 (2%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYS 354
S YSPTSP+YSPTSPSY P S S SP S +YSP SP +S VSP YSP+S SP
Sbjct: 110 SPTYSPTSPSYSPTSPSYRPNSSSDSPDSHSYSPVSPDHSLVSPQYSPTSTHHSPILSSP 169
Query: 353 PSQPGYSPSSTSQYTPQTNDKDERGKD*WR---RSMRQFEARRSILRFCREGTLRCSWSI 183
P GY P +T+ E G R+ + E R+I C + L +
Sbjct: 170 PEDYGYGPDDIEAGKMKTDQLKEIGDGSSHVDGRNYHKAETTRTIHVSCPKVDLLVGAAA 229
Query: 182 SLLCINHLISKTLFDIKFEE 123
+L + H + + +K E
Sbjct: 230 TLRFLQHNLCAQIRILKDSE 249
[204][TOP]
>UniRef100_B9PMD7 DNA-directed RNA polymerase n=2 Tax=Toxoplasma gondii
RepID=B9PMD7_TOXGO
Length = 1892
Score = 80.1 bits (196), Expect = 9e-14
Identities = 47/106 (44%), Positives = 62/106 (58%), Gaps = 6/106 (5%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSG---VSPDYSPSSPQFS 372
+P+SP SP SP YSPTSP YSPTSP YSP+ YSP SP Y +G +SP ++ SP++S
Sbjct: 1750 NPTSPTSPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQGPLSPSFTVQSPRYS 1809
Query: 371 PST--GYSPSQPGYSPSSTSQYTPQTNDKDERGKD*WRRSMRQFEA 240
PS+ YSP+ SP +P D G D + + +EA
Sbjct: 1810 PSSPAAYSPT----SPMPNVAGSPSYEDSHAPGGDTYSPTSPMYEA 1851
Score = 67.0 bits (162), Expect = 8e-10
Identities = 41/90 (45%), Positives = 49/90 (54%), Gaps = 17/90 (18%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYN----------------SGVSPDY 396
YSPTSP SP SYSP+SP SYSP+SP YSP+S + S SP
Sbjct: 1671 YSPTSPTLSP---SYSPSSPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPFSPSN 1727
Query: 395 SPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 306
+P SP FS ST YSP+ P + TS +P
Sbjct: 1728 NPMSPHFSASTSYSPTSPVQQSNPTSPTSP 1757
Score = 66.2 bits (160), Expect = 1e-09
Identities = 50/111 (45%), Positives = 57/111 (51%), Gaps = 37/111 (33%)
Frame = -2
Query: 539 SPSSP--YSPTSPNYSPTS-----------------------PSYSPTSP------SYSP 453
SPSSP YSPTSP YSPTS PS +P SP SYSP
Sbjct: 1683 SPSSPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPFSPSNNPMSPHFSASTSYSP 1742
Query: 452 SSPTY-----SPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 318
+SP SP+SPY SP YSP+SP++SP S YSP+ YSP S S
Sbjct: 1743 TSPVQQSNPTSPTSPY----SPAYSPTSPRYSPTSPMYSPTFAPYSPQSPS 1789
Score = 60.1 bits (144), Expect = 1e-07
Identities = 43/102 (42%), Positives = 48/102 (47%), Gaps = 39/102 (38%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPT-------------------------SPSYSPSSPT- 441
SP SP YSPTSP YSPTSP YSPT SP YSPSSP
Sbjct: 1756 SPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQGPLSPSFTVQSPRYSPSSPAA 1815
Query: 440 YSPSSPY-NSGVSPDY-----------SPSSPQFSPSTGYSP 351
YSP+SP N SP Y SP+SP + + +SP
Sbjct: 1816 YSPTSPMPNVAGSPSYEDSHAPGGDTYSPTSPMYEANDPFSP 1857
Score = 57.0 bits (136), Expect = 8e-07
Identities = 41/107 (38%), Positives = 51/107 (47%), Gaps = 35/107 (32%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSP----SYSPSSPTYSPSSPYNS-------------- 414
SP +P SP SP+ P +SPTSP + SSP+YSPSSP ++
Sbjct: 1596 SPRNPLSPLSPS-GPPGGVFSPTSPILGSALETSSPSYSPSSPQSAYFQNDGSSSAVDMV 1654
Query: 413 ----GVSPD-------YSPSSPQFSPS------TGYSPSQPGYSPSS 324
GV D YSP+SP SPS YSP+ P YSP+S
Sbjct: 1655 ISPGGVGSDGRGRGGSYSPTSPTLSPSYSPSSPPSYSPTSPAYSPTS 1701
[205][TOP]
>UniRef100_B6KEC6 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii ME49
RepID=B6KEC6_TOXGO
Length = 1892
Score = 80.1 bits (196), Expect = 9e-14
Identities = 47/106 (44%), Positives = 62/106 (58%), Gaps = 6/106 (5%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSG---VSPDYSPSSPQFS 372
+P+SP SP SP YSPTSP YSPTSP YSP+ YSP SP Y +G +SP ++ SP++S
Sbjct: 1750 NPTSPTSPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQGPLSPSFTVQSPRYS 1809
Query: 371 PST--GYSPSQPGYSPSSTSQYTPQTNDKDERGKD*WRRSMRQFEA 240
PS+ YSP+ SP +P D G D + + +EA
Sbjct: 1810 PSSPAAYSPT----SPMPNVAGSPSYEDSHAPGGDTYSPTSPMYEA 1851
Score = 65.9 bits (159), Expect = 2e-09
Identities = 40/90 (44%), Positives = 49/90 (54%), Gaps = 17/90 (18%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYN----------------SGVSPDY 396
YSPTSP SP SYSP++P SYSP+SP YSP+S + S SP
Sbjct: 1671 YSPTSPTLSP---SYSPSAPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPFSPSN 1727
Query: 395 SPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 306
+P SP FS ST YSP+ P + TS +P
Sbjct: 1728 NPMSPHFSASTSYSPTSPVQQSNPTSPTSP 1757
Score = 65.1 bits (157), Expect = 3e-09
Identities = 49/111 (44%), Positives = 57/111 (51%), Gaps = 37/111 (33%)
Frame = -2
Query: 539 SPSSP--YSPTSPNYSPTS-----------------------PSYSPTSP------SYSP 453
SPS+P YSPTSP YSPTS PS +P SP SYSP
Sbjct: 1683 SPSAPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPFSPSNNPMSPHFSASTSYSP 1742
Query: 452 SSPTY-----SPSSPYNSGVSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 318
+SP SP+SPY SP YSP+SP++SP S YSP+ YSP S S
Sbjct: 1743 TSPVQQSNPTSPTSPY----SPAYSPTSPRYSPTSPMYSPTFAPYSPQSPS 1789
Score = 60.1 bits (144), Expect = 1e-07
Identities = 43/102 (42%), Positives = 48/102 (47%), Gaps = 39/102 (38%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPT-------------------------SPSYSPSSPT- 441
SP SP YSPTSP YSPTSP YSPT SP YSPSSP
Sbjct: 1756 SPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQGPLSPSFTVQSPRYSPSSPAA 1815
Query: 440 YSPSSPY-NSGVSPDY-----------SPSSPQFSPSTGYSP 351
YSP+SP N SP Y SP+SP + + +SP
Sbjct: 1816 YSPTSPMPNVAGSPSYEDSHAPGGDTYSPTSPMYEANDPFSP 1857
Score = 57.0 bits (136), Expect = 8e-07
Identities = 41/107 (38%), Positives = 51/107 (47%), Gaps = 35/107 (32%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSP----SYSPSSPTYSPSSPYNS-------------- 414
SP +P SP SP+ P +SPTSP + SSP+YSPSSP ++
Sbjct: 1596 SPRNPLSPLSPS-GPPGGVFSPTSPILGSALETSSPSYSPSSPQSAYFQNDGSSSAVDMV 1654
Query: 413 ----GVSPD-------YSPSSPQFSPS------TGYSPSQPGYSPSS 324
GV D YSP+SP SPS YSP+ P YSP+S
Sbjct: 1655 ISPGGVGSDGRGRGGSYSPTSPTLSPSYSPSAPPSYSPTSPAYSPTS 1701
[206][TOP]
>UniRef100_A8N128 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea okayama7#130
RepID=A8N128_COPC7
Length = 1642
Score = 79.3 bits (194), Expect = 2e-13
Identities = 47/98 (47%), Positives = 59/98 (60%), Gaps = 26/98 (26%)
Frame = -2
Query: 539 SPSSPYS--------------PTSPNYSP-------TSPSYSPTSPSYSPSSPT-YSPSS 426
+P+SP+S TSP YSP TSP+YSPTSP +SP+SP YSP S
Sbjct: 1521 APTSPFSNQYATSPFYDSRRQATSPTYSPTSPIAGLTSPAYSPTSPGFSPTSPNGYSPQS 1580
Query: 425 P-YNSGVSPDYSPSSPQFSP---STGYSPSQPGYSPSS 324
P + S SP+YSP+SP +SP S YSPS P +SP+S
Sbjct: 1581 PNFGSPASPNYSPASPSYSPAPASPNYSPSSPTWSPTS 1618
Score = 76.3 bits (186), Expect = 1e-12
Identities = 45/95 (47%), Positives = 56/95 (58%), Gaps = 17/95 (17%)
Frame = -2
Query: 539 SPSSP--YSPTSPNYSPTSPSYSPTSP-----SYSP--------SSPTYSPSSPYNSGVS 405
SPSSP YSPTSP P SP +PTSP + SP +SPTYSP+SP S
Sbjct: 1499 SPSSPNAYSPTSPGMVPRSPYGAPTSPFSNQYATSPFYDSRRQATSPTYSPTSPIAGLTS 1558
Query: 404 PDYSPSSPQFSPST--GYSPSQPGYSPSSTSQYTP 306
P YSP+SP FSP++ GYSP P + ++ Y+P
Sbjct: 1559 PAYSPTSPGFSPTSPNGYSPQSPNFGSPASPNYSP 1593
Score = 69.3 bits (168), Expect = 2e-10
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 19/98 (19%)
Frame = -2
Query: 536 PSSPYSP----TSPNYSPTSPS-YSPTSPSYSPSSPTYSPSSPYNS-------------G 411
P SP+ P YSP+SP+ YSPTSP P SP +P+SP+++
Sbjct: 1483 PQSPHGAGGMSPGPGYSPSSPNAYSPTSPGMVPRSPYGAPTSPFSNQYATSPFYDSRRQA 1542
Query: 410 VSPDYSPSSPQFS-PSTGYSPSQPGYSPSSTSQYTPQT 300
SP YSP+SP S YSP+ PG+SP+S + Y+PQ+
Sbjct: 1543 TSPTYSPTSPIAGLTSPAYSPTSPGFSPTSPNGYSPQS 1580
Score = 68.2 bits (165), Expect = 4e-10
Identities = 38/69 (55%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
Frame = -2
Query: 539 SPSSP--YSPTSPNY-SPTSPSYSPTSPSYSPS--SPTYSPSSPYNSGVSPDYSPSSPQF 375
SP+SP YSP SPN+ SP SP+YSP SPSYSP+ SP YSPSSP S SP + + P
Sbjct: 1569 SPTSPNGYSPQSPNFGSPASPNYSPASPSYSPAPASPNYSPSSPTWSPTSPAHDQNGPTN 1628
Query: 374 SPSTGYSPS 348
+ S+ Y S
Sbjct: 1629 NRSSAYQQS 1637
Score = 54.3 bits (129), Expect = 5e-06
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 4/55 (7%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGVSP-DYSPS 387
SP+SP YSP SP+YSP SP+YSP+SP++SP+SP + + P N+ S SPS
Sbjct: 1585 SPASPNYSPASPSYSPAPASPNYSPSSPTWSPTSPAHDQNGPTNNRSSAYQQSPS 1639
[207][TOP]
>UniRef100_A7TTU2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Vanderwaltozyma
polyspora DSM 70294 RepID=A7TTU2_VANPO
Length = 1311
Score = 78.2 bits (191), Expect = 3e-13
Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Frame = -2
Query: 539 SPSSPY--SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 366
SPSSP +SP +SPTSP+YSPTSPSYSP+SP+YSP+S S S YSP+SP +S +
Sbjct: 1211 SPSSPGFGGVSSPGFSPTSPAYSPTSPSYSPTSPSYSPTSTSYSQTSSSYSPTSPSYSQN 1270
Query: 365 TGYSPSQP 342
++P P
Sbjct: 1271 LHHTPKIP 1278
Score = 61.6 bits (148), Expect = 3e-08
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Frame = -2
Query: 539 SPSSPY--SPTSPNYSP-TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SP + Y SP+SP + +SP +SPTSP+YSP+SP+YSP+SP YSP+S
Sbjct: 1203 SPFTAYGESPSSPGFGGVSSPGFSPTSPAYSPTSPSYSPTSP-------SYSPTS----- 1250
Query: 368 STGYSPSQPGYSPSSTS 318
T YS + YSP+S S
Sbjct: 1251 -TSYSQTSSSYSPTSPS 1266
[208][TOP]
>UniRef100_UPI0000F3065A UPI0000F3065A related cluster n=1 Tax=Bos taurus
RepID=UPI0000F3065A
Length = 540
Score = 77.0 bits (188), Expect = 8e-13
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
P SP + P SP + P SP + SP + P SP ++P SP + SPD+ P SP++ P S
Sbjct: 67 PQSPEFEPQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDSQSPDFEPQSPRYEPQSP 126
Query: 362 GYSPSQPGYSPSSTSQYTPQTNDKDERGKD*WRRSMRQFEARRS 231
GY P PGY P S Y Q+ + + + + ++ +FEA S
Sbjct: 127 GYEPKSPGYEPRSPG-YGTQSPEYEPQNPE-FKTQSPEFEAESS 168
Score = 57.0 bits (136), Expect = 8e-07
Identities = 31/88 (35%), Positives = 37/88 (42%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
S S + P SP ++P SP SP + P SP Y P SP SP Y P SP G
Sbjct: 88 SRSPGFVPPSPEFAPRSPESDSQSPDFEPQSPRYEPQSPGYEPKSPGYEPRSP------G 141
Query: 359 YSPSQPGYSPSSTSQYTPQTNDKDERGK 276
Y P Y P + T + E K
Sbjct: 142 YGTQSPEYEPQNPEFKTQSPEFEAESSK 169
Score = 56.2 bits (134), Expect = 1e-06
Identities = 26/75 (34%), Positives = 36/75 (48%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
PS ++P SP SP + P SP Y P SP Y P SP SP Y SP++ P
Sbjct: 96 PSPEFAPRSPESDSQSPDFEPQSPRYEPQSPGYEPKSPGYEPRSPGYGTQSPEYEPQNPE 155
Query: 356 SPSQPGYSPSSTSQY 312
+Q + +S++
Sbjct: 156 FKTQSPEFEAESSKF 170
[209][TOP]
>UniRef100_A9SW33 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SW33_PHYPA
Length = 284
Score = 73.9 bits (180), Expect = 7e-12
Identities = 42/77 (54%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS-------SPQF 375
S PYSP+ SP SP+YSP+ SP SPTYSPS Y S SP YSPS SP +
Sbjct: 158 SPPYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTY 217
Query: 374 SPSTGY-SPSQPGYSPS 327
SPS Y SP P YSPS
Sbjct: 218 SPSPVYKSPPSPSYSPS 234
Score = 67.8 bits (164), Expect = 5e-10
Identities = 42/84 (50%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS-------SPQF 375
S PY+ SP Y SP YSP+ SP SPTYSPS Y S SP YSPS SP +
Sbjct: 146 SPPYASPSPVYE--SPPYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTY 203
Query: 374 SPSTGY-SPSQPGYSPSSTSQYTP 306
SPS Y SP P YSPS + P
Sbjct: 204 SPSPVYKSPPSPTYSPSPVYKSPP 227
Score = 61.6 bits (148), Expect = 3e-08
Identities = 41/85 (48%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS-------SPQ 378
PS P P SP Y SP Y+ SP Y SP YSPS Y S SP YSPS SP
Sbjct: 133 PSCPPPPESPVYE--SPPYASPSPVYE--SPPYSPSPVYKSPPSPTYSPSPVYKSPPSPT 188
Query: 377 FSPSTGY-SPSQPGYSPSSTSQYTP 306
+SPS Y SP P YSPS + P
Sbjct: 189 YSPSPVYKSPPSPTYSPSPVYKSPP 213
Score = 58.9 bits (141), Expect = 2e-07
Identities = 34/59 (57%), Positives = 36/59 (61%), Gaps = 8/59 (13%)
Frame = -2
Query: 539 SPSSPY-SPTSPNYSPTSPSYSPTSPSYSPS-------SPTYSPSSPYNSGVSPDYSPS 387
SPS Y SP SP YSP+ SP SP+YSPS SPTYSPS Y S SP YSPS
Sbjct: 176 SPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPSYSPS 234
[210][TOP]
>UniRef100_Q9AXN1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Botryocladia
uvarioides RepID=Q9AXN1_9FLOR
Length = 1712
Score = 72.4 bits (176), Expect = 2e-11
Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 19/95 (20%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSP--------------SYSPTSPSY-SPSSPTYSPSSPYNSGVS 405
SP + YSPTSP ++PTSP +YSPT PSY + +SP Y Y+ G
Sbjct: 1598 SPGAQYSPTSPAFTPTSPGYSSATGPGRPGTGAYSPTGPSYNAAASPGYQSGINYSPGSP 1657
Query: 404 PDYSPSSPQFSPST----GYSPSQPGYSPSSTSQY 312
YSP+SP F+P + GYSPS P Y+P ++ Y
Sbjct: 1658 HTYSPNSPVFTPRSPAAHGYSPSTPQYNPQGSNPY 1692
[211][TOP]
>UniRef100_Q01K81 H0525C06.3 protein n=2 Tax=Oryza sativa RepID=Q01K81_ORYSA
Length = 350
Score = 72.4 bits (176), Expect = 2e-11
Identities = 42/95 (44%), Positives = 55/95 (57%), Gaps = 15/95 (15%)
Frame = -2
Query: 539 SPSSPYSPT----SPNYSPTSPSYSPTSPSYSPS-------SPTYSPSSPYNSGVSPDYS 393
+PS P+SP+ SP+YSP++P SP YSPS SP Y+PS+P+ SPDY+
Sbjct: 162 APSPPWSPSRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYTPSTPWRRAASPDYA 221
Query: 392 PSSPQFSP----STGYSPSQPGYSPSSTSQYTPQT 300
PS+P P S YSPS P +S + YTP T
Sbjct: 222 PSTPWSPPRRASSPDYSPSTPPRRAASPN-YTPST 255
Score = 65.9 bits (159), Expect = 2e-09
Identities = 41/98 (41%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP---QFSPS-T 363
+P +P SP +SP YSP++P +SP Y+PS+P SPDYSPSSP SP T
Sbjct: 221 APSTPWSPPRRASSPDYSPSTPPRRAASPNYTPSTPPRRAASPDYSPSSPPRRAASPEYT 280
Query: 362 GYSP----SQPGYSPSSTSQYTPQTNDKDERGKD*WRR 261
SP + P Y+P ST +P +D R WRR
Sbjct: 281 QLSPPRRAASPDYNP-STPPPSPVPSDAGSRTSPPWRR 317
Score = 60.8 bits (146), Expect = 6e-08
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 19/91 (20%)
Frame = -2
Query: 539 SPSSP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN---SGVSPDYS 393
SPS+P YSP++P SP Y+P++P +SP Y+PS+P++ SPDYS
Sbjct: 179 SPSTPPRRAASPDYSPSTPPRRAASPDYTPSTPWRRAASPDYAPSTPWSPPRRASSPDYS 238
Query: 392 PSS-PQFSPSTGYSPS-------QPGYSPSS 324
PS+ P+ + S Y+PS P YSPSS
Sbjct: 239 PSTPPRRAASPNYTPSTPPRRAASPDYSPSS 269
Score = 57.8 bits (138), Expect = 5e-07
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 17/90 (18%)
Frame = -2
Query: 518 PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS----------SPQFSP 369
P P + SP Y+P++P +SP Y+PS+P+ SPD++PS SP +SP
Sbjct: 121 PPPPPRTAASPEYTPSTPWRRAASPDYTPSTPWRRAASPDHAPSPPWSPSRRAASPDYSP 180
Query: 368 ST-GYSPSQPGYSPS------STSQYTPQT 300
ST + P YSPS ++ YTP T
Sbjct: 181 STPPRRAASPDYSPSTPPRRAASPDYTPST 210
Score = 55.1 bits (131), Expect = 3e-06
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 8/65 (12%)
Frame = -2
Query: 539 SPSSP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SPS+P Y+P++P SP YSP+SP +SP Y+ SP SPDY+PS+
Sbjct: 238 SPSTPPRRAASPNYTPSTPPRRAASPDYSPSSPPRRAASPEYTQLSPPRRAASPDYNPST 297
Query: 383 PQFSP 369
P SP
Sbjct: 298 PPPSP 302
[212][TOP]
>UniRef100_UPI00004C0623 PREDICTED: similar to zinc finger protein 239 (predicted) isoform 1
n=1 Tax=Canis lupus familiaris RepID=UPI00004C0623
Length = 554
Score = 71.2 bits (173), Expect = 4e-11
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
P SP + SP + P SP + SP + P SP ++P SP + SP++ P SP++ P S
Sbjct: 67 PQSPGFESQSPRFEPESPGFESRSPGFVPPSPEFAPRSPDSDSQSPEFEPQSPRYEPQSP 126
Query: 362 GYSPSQPGYSPSSTSQYTPQTNDKDER 282
GY P PGY P S Y P++ + R
Sbjct: 127 GYEPRSPGYEPKSPG-YEPKSPGYEPR 152
Score = 69.7 bits (169), Expect = 1e-10
Identities = 32/72 (44%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STG 360
PS ++P SP+ SP + P SP Y P SP Y P SP SP Y P SP + P S G
Sbjct: 96 PSPEFAPRSPDSDSQSPEFEPQSPRYEPQSPGYEPRSPGYEPKSPGYEPKSPGYEPRSPG 155
Query: 359 YSPSQPGYSPSS 324
Y PGY P +
Sbjct: 156 YESQSPGYEPQN 167
Score = 68.6 bits (166), Expect = 3e-10
Identities = 39/104 (37%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
S S + P SP ++P SP SP + P SP Y P SP SP Y P SP + P S
Sbjct: 88 SRSPGFVPPSPEFAPRSPDSDSQSPEFEPQSPRYEPQSPGYEPRSPGYEPKSPGYEPKSP 147
Query: 362 GYSPSQPGYSPSSTSQYTPQTNDKDERGKD*WRRSMRQFEARRS 231
GY P PGY S + Y PQ + ++ +FEA+ S
Sbjct: 148 GYEPRSPGYE-SQSPGYEPQNPE--------FKTQSPEFEAQSS 182
Score = 54.7 bits (130), Expect = 4e-06
Identities = 25/55 (45%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF 375
P SP Y P SP Y P SP Y P SP Y SP Y P +P SP++ S +F
Sbjct: 130 PRSPGYEPKSPGYEPKSPGYEPRSPGYESQSPGYEPQNPEFKTQSPEFEAQSSKF 184
[213][TOP]
>UniRef100_Q4UCP5 DNA-directed RNA polymerase n=1 Tax=Theileria annulata
RepID=Q4UCP5_THEAN
Length = 1678
Score = 71.2 bits (173), Expect = 4e-11
Identities = 46/97 (47%), Positives = 57/97 (58%), Gaps = 17/97 (17%)
Frame = -2
Query: 539 SPSSPYSPTS-------PNYSPTSP--------SYSPTSPSYSPSSPTYSPSSPYN--SG 411
SP+SP SPTS P YSPTSP + SPTSP YSP+ YSP+SP + S
Sbjct: 1556 SPTSPMSPTSAISPVYSPAYSPTSPMSPTSPTSALSPTSPVYSPA---YSPTSPTSAMSP 1612
Query: 410 VSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQT 300
SP YSP+ SP+ GY+P+ P YSP+ Y+P T
Sbjct: 1613 TSPVYSPAYSPTSPNLGYAPTSPVYSPA----YSPTT 1645
Score = 70.5 bits (171), Expect = 7e-11
Identities = 45/88 (51%), Positives = 56/88 (63%), Gaps = 10/88 (11%)
Frame = -2
Query: 539 SPSSPYSPTSPN--YSPTSPSYSPTSPSYSPSSPT--YSPSSP-YNSGVSPD-----YSP 390
SP+SP SPTSP SPTSP YSP +YSP+SPT SP+SP Y+ SP Y+P
Sbjct: 1576 SPTSPMSPTSPTSALSPTSPVYSP---AYSPTSPTSAMSPTSPVYSPAYSPTSPNLGYAP 1632
Query: 389 SSPQFSPSTGYSPSQPGYSPSSTSQYTP 306
+SP +SP+ YSP+ P Y S TS +P
Sbjct: 1633 TSPVYSPA--YSPTTPNYGYSPTSPLSP 1658
Score = 62.0 bits (149), Expect = 3e-08
Identities = 38/71 (53%), Positives = 49/71 (69%), Gaps = 7/71 (9%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPS--YSPSSPTYSPS-SPY--NSGVSPD--YSPSSP 381
SP+S SPTSP YSP +YSPTSP+ Y+P+SP YSP+ SP N G SP SP+SP
Sbjct: 1605 SPTSAMSPTSPVYSP---AYSPTSPNLGYAPTSPVYSPAYSPTTPNYGYSPTSPLSPTSP 1661
Query: 380 QFSPSTGYSPS 348
+SP+ +SP+
Sbjct: 1662 AYSPTDPFSPN 1672
[214][TOP]
>UniRef100_UPI0001792AA2 PREDICTED: hypothetical protein n=1 Tax=Acyrthosiphon pisum
RepID=UPI0001792AA2
Length = 649
Score = 70.1 bits (170), Expect = 1e-10
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = -2
Query: 533 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
SSP Y +SP+Y +SPSY +SPSY SS +Y SSP G SP Y SSP + S+ Y
Sbjct: 463 SSPSYGGSSPSYGGSSPSYGGSSPSYGGSSSSYGGSSPSYGGSSPSYGGSSPSYGSSSLY 522
Query: 356 SPSQPGYSPSSTSQYTP 306
+ + P YS SS+S +P
Sbjct: 523 AGNSPSYSGSSSSYGSP 539
Score = 63.5 bits (153), Expect = 9e-09
Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GY 357
SS Y +SP+Y +SPSY +SPSY SSP+Y +SP G S Y SSP + S+ Y
Sbjct: 380 SSSYGSSSPSYGGSSPSYGGSSPSYGGSSPSYGGNSPSYGGSSHSYGGSSPSYGGSSHSY 439
Query: 356 SPSQPGYSPSSTS 318
S P Y SS S
Sbjct: 440 GGSSPSYGGSSHS 452
Score = 63.2 bits (152), Expect = 1e-08
Identities = 34/73 (46%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF-SPSTGY 357
S Y +SP+Y +S SY +SPSY SSP+Y SSP G SP Y SSP + S+ Y
Sbjct: 436 SHSYGGSSPSYGGSSHSYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSSSY 495
Query: 356 SPSQPGYSPSSTS 318
S P Y SS S
Sbjct: 496 GGSSPSYGGSSPS 508
Score = 60.8 bits (146), Expect = 6e-08
Identities = 33/73 (45%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GY 357
SS Y +S +Y +S SY +SPSY SSP+Y SSP G SP Y +SP + S+ Y
Sbjct: 366 SSSYGGSSSSYGGSSSSYGSSSPSYGGSSPSYGGSSPSYGGSSPSYGGNSPSYGGSSHSY 425
Query: 356 SPSQPGYSPSSTS 318
S P Y SS S
Sbjct: 426 GGSSPSYGGSSHS 438
Score = 60.1 bits (144), Expect = 1e-07
Identities = 33/73 (45%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GY 357
S Y +SP+Y +S SY +SPSY SS +Y SSP G SP Y SSP + S+ Y
Sbjct: 422 SHSYGGSSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSPSYGGSSPSYGGSSPSY 481
Query: 356 SPSQPGYSPSSTS 318
S P Y SS+S
Sbjct: 482 GGSSPSYGGSSSS 494
Score = 58.9 bits (141), Expect = 2e-07
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Frame = -2
Query: 533 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
SSP Y +S +Y +SPSY +SPSY SSP+Y SS Y +G SP YS SS + + Y
Sbjct: 484 SSPSYGGSSSSYGGSSPSYGGSSPSYGGSSPSYGSSSLY-AGNSPSYSGSSSSYGSPSPY 542
Query: 356 SPSQPGYSP--SSTSQYTPQTN 297
PS SP SS+S P ++
Sbjct: 543 KPSYGSPSPYKSSSSYKAPYSS 564
Score = 58.5 bits (140), Expect = 3e-07
Identities = 36/82 (43%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF---SP 369
S S Y +SP+Y +SPSY +SPSY +SP+Y SS G SP Y SS + SP
Sbjct: 385 SSSPSYGGSSPSYGGSSPSYGGSSPSYGGNSPSYGGSSHSYGGSSPSYGGSSHSYGGSSP 444
Query: 368 STG-----YSPSQPGYSPSSTS 318
S G Y S P Y SS S
Sbjct: 445 SYGGSSHSYGGSSPSYGGSSPS 466
Score = 56.6 bits (135), Expect = 1e-06
Identities = 36/81 (44%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST--- 363
S Y +S +Y +SPSY +S SY SSP+Y SS G SP Y SSP + S+
Sbjct: 415 SPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSPSYGGSSPSY 474
Query: 362 -GYSPSQPGYSPS---STSQY 312
G SPS G SPS S+S Y
Sbjct: 475 GGSSPSYGGSSPSYGGSSSSY 495
Score = 55.5 bits (132), Expect = 2e-06
Identities = 37/74 (50%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Frame = -2
Query: 533 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF---SPS 366
SSP Y SP+Y +S SY +SPSY SS +Y SSP G S Y SSP + SPS
Sbjct: 407 SSPSYGGNSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSPS 466
Query: 365 -TGYSPSQPGYSPS 327
G SPS G SPS
Sbjct: 467 YGGSSPSYGGSSPS 480
Score = 54.3 bits (129), Expect = 5e-06
Identities = 33/71 (46%), Positives = 39/71 (54%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP YS +SP++ S SY +S SY SS +Y SSP G SP Y SSP + G
Sbjct: 351 SPPQKYS-SSPSFGGGSSSYGGSSSSYGGSSSSYGSSSPSYGGSSPSYGGSSPSYG---G 406
Query: 359 YSPSQPGYSPS 327
SPS G SPS
Sbjct: 407 SSPSYGGNSPS 417
[215][TOP]
>UniRef100_Q4N0F9 DNA-directed RNA polymerase n=1 Tax=Theileria parva
RepID=Q4N0F9_THEPA
Length = 1681
Score = 70.1 bits (170), Expect = 1e-10
Identities = 45/88 (51%), Positives = 56/88 (63%), Gaps = 10/88 (11%)
Frame = -2
Query: 539 SPSSPYSPTSPN--YSPTSPSYSPTSPSYSPSSPT--YSPSSP-YNSGVSPD-----YSP 390
SP+SP SPTSP SPTSP YSP +YSP+SPT SP+SP Y+ SP Y+P
Sbjct: 1579 SPTSPMSPTSPANALSPTSPVYSP---AYSPTSPTSAMSPTSPVYSPAYSPTSPNLGYAP 1635
Query: 389 SSPQFSPSTGYSPSQPGYSPSSTSQYTP 306
+SP +SP+ YSP+ P Y S TS +P
Sbjct: 1636 TSPVYSPA--YSPTSPNYGYSPTSPLSP 1661
Score = 68.9 bits (167), Expect = 2e-10
Identities = 43/88 (48%), Positives = 52/88 (59%), Gaps = 17/88 (19%)
Frame = -2
Query: 539 SPSSPYSPTS-------PNYSPTSP--------SYSPTSPSYSPSSPTYSPSSPYN--SG 411
SP SP SPTS P YSPTSP + SPTSP YSP+ YSP+SP + S
Sbjct: 1559 SPMSPMSPTSAMSPVYSPAYSPTSPMSPTSPANALSPTSPVYSPA---YSPTSPTSAMSP 1615
Query: 410 VSPDYSPSSPQFSPSTGYSPSQPGYSPS 327
SP YSP+ SP+ GY+P+ P YSP+
Sbjct: 1616 TSPVYSPAYSPTSPNLGYAPTSPVYSPA 1643
Score = 63.2 bits (152), Expect = 1e-08
Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 8/72 (11%)
Frame = -2
Query: 539 SPSSPYSPTSP----NYSPTSPS--YSPTSPSYSPSSPTYSPSSPYNSGVSP--DYSPSS 384
SP+S SPTSP YSPTSP+ Y+PTSP YSP+ YSP+SP N G SP SP+S
Sbjct: 1608 SPTSAMSPTSPVYSPAYSPTSPNLGYAPTSPVYSPA---YSPTSP-NYGYSPTSPLSPTS 1663
Query: 383 PQFSPSTGYSPS 348
P +SP+ +SP+
Sbjct: 1664 PAYSPTDPFSPN 1675
Score = 62.8 bits (151), Expect = 2e-08
Identities = 42/84 (50%), Positives = 51/84 (60%), Gaps = 13/84 (15%)
Frame = -2
Query: 539 SPSSPYSPTSPN--YSPTSP--SYSPT-------SPSYSPSSPTYSPSSPYN--SGVSPD 399
SP+SP SP SP SPTSP SPT SP+YSP+SP SP+SP N S SP
Sbjct: 1541 SPTSPTSPMSPTSPMSPTSPMSPMSPTSAMSPVYSPAYSPTSP-MSPTSPANALSPTSPV 1599
Query: 398 YSPSSPQFSPSTGYSPSQPGYSPS 327
YSP+ SP++ SP+ P YSP+
Sbjct: 1600 YSPAYSPTSPTSAMSPTSPVYSPA 1623
Score = 55.5 bits (132), Expect = 2e-06
Identities = 43/82 (52%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF--SPSTGY 357
SP SPTSP SPTSP SPTSP SP SPT + S Y SP YSP+SP SP+
Sbjct: 1541 SPTSPTSP-MSPTSPM-SPTSPM-SPMSPTSAMSPVY----SPAYSPTSPMSPTSPANAL 1593
Query: 356 SPSQP----GYSPSS-TSQYTP 306
SP+ P YSP+S TS +P
Sbjct: 1594 SPTSPVYSPAYSPTSPTSAMSP 1615
[216][TOP]
>UniRef100_UPI0000E241DC PREDICTED: hypothetical protein n=1 Tax=Pan troglodytes
RepID=UPI0000E241DC
Length = 1156
Score = 69.3 bits (168), Expect = 2e-10
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
P SP + P SP + P SP + SP P SP ++P SP + SP++ SP++ P S
Sbjct: 676 PQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSP 735
Query: 362 GYSPSQPGYSPSSTSQYTPQT 300
GY P PGY P S Y P++
Sbjct: 736 GYEPRSPGYEPRSPG-YEPRS 755
Score = 57.8 bits (138), Expect = 5e-07
Identities = 30/75 (40%), Positives = 36/75 (48%)
Frame = -2
Query: 518 PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPG 339
P SP ++P SP SP + SP Y P SP SP Y P SP GY P PG
Sbjct: 704 PPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPRSP------GYEPRSPG 757
Query: 338 YSPSSTSQYTPQTND 294
Y S +S+Y Q +
Sbjct: 758 YE-SESSRYESQNTE 771
Score = 56.2 bits (134), Expect = 1e-06
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = -2
Query: 497 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTS 318
P SP + P SP + P SP + P SP SP P SP+F+P + S SQ S +
Sbjct: 669 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 728
Query: 317 QYTPQTNDKDER 282
+Y PQ+ + R
Sbjct: 729 RYEPQSPGYEPR 740
[217][TOP]
>UniRef100_B4MT78 GK20106 n=1 Tax=Drosophila willistoni RepID=B4MT78_DROWI
Length = 175
Score = 69.3 bits (168), Expect = 2e-10
Identities = 42/108 (38%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
+P+SP +PT+P SPT+P+ PTSP+ P+SPT +P++P S SP +P++P SP+T
Sbjct: 25 TPTSPTTPTTPPTSPTTPTTPPTSPTTPPTSPT-TPTTPPTSPTSPT-TPTTPPTSPTT- 81
Query: 359 YSPSQPGYSPSSTSQYTPQTNDKDERGK--D*WRRSMRQFEARRSILR 222
P+ P SP++ ++ TP T + R R+F RR I R
Sbjct: 82 --PTTPPTSPTTPAETTPTTTQATPKASTLSPAERRRRRFRRRRRIER 127
[218][TOP]
>UniRef100_B7Z2Y7 cDNA FLJ59521, moderately similar to Zinc finger and SCAN
domain-containing protein 2 n=1 Tax=Homo sapiens
RepID=B7Z2Y7_HUMAN
Length = 453
Score = 69.3 bits (168), Expect = 2e-10
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
P SP + P SP + P SP + SP P SP ++P SP + SP++ SP++ P S
Sbjct: 36 PQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSP 95
Query: 362 GYSPSQPGYSP------SSTSQYTPQTND 294
GY P PGY P S +S+Y Q +
Sbjct: 96 GYEPRSPGYEPRSPGYESESSRYESQNTE 124
Score = 56.2 bits (134), Expect = 1e-06
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = -2
Query: 497 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTS 318
P SP + P SP + P SP + P SP SP P SP+F+P + S SQ S +
Sbjct: 29 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 88
Query: 317 QYTPQTNDKDER 282
+Y PQ+ + R
Sbjct: 89 RYEPQSPGYEPR 100
[219][TOP]
>UniRef100_B2RD90 cDNA, FLJ96507 n=1 Tax=Homo sapiens RepID=B2RD90_HUMAN
Length = 520
Score = 69.3 bits (168), Expect = 2e-10
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
P SP + P SP + P SP + SP P SP ++P SP + SP++ SP++ P S
Sbjct: 47 PQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSP 106
Query: 362 GYSPSQPGYSP------SSTSQYTPQTND 294
GY P PGY P S +S+Y Q +
Sbjct: 107 GYEPRSPGYEPRSPGYESESSRYESQNTE 135
Score = 56.2 bits (134), Expect = 1e-06
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = -2
Query: 497 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTS 318
P SP + P SP + P SP + P SP SP P SP+F+P + S SQ S +
Sbjct: 40 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 99
Query: 317 QYTPQTNDKDER 282
+Y PQ+ + R
Sbjct: 100 RYEPQSPGYEPR 111
[220][TOP]
>UniRef100_Q9H5H4 Zinc finger protein 768 n=1 Tax=Homo sapiens RepID=ZN768_HUMAN
Length = 540
Score = 69.3 bits (168), Expect = 2e-10
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
P SP + P SP + P SP + SP P SP ++P SP + SP++ SP++ P S
Sbjct: 67 PQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSP 126
Query: 362 GYSPSQPGYSP------SSTSQYTPQTND 294
GY P PGY P S +S+Y Q +
Sbjct: 127 GYEPRSPGYEPRSPGYESESSRYESQNTE 155
Score = 56.2 bits (134), Expect = 1e-06
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = -2
Query: 497 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTS 318
P SP + P SP + P SP + P SP SP P SP+F+P + S SQ S +
Sbjct: 60 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 119
Query: 317 QYTPQTNDKDER 282
+Y PQ+ + R
Sbjct: 120 RYEPQSPGYEPR 131
[221][TOP]
>UniRef100_Q3JTV6 Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei
1710b RepID=Q3JTV6_BURP1
Length = 364
Score = 68.9 bits (167), Expect = 2e-10
Identities = 52/107 (48%), Positives = 66/107 (61%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 246 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 298
Query: 359 YSPSQPGYSPSSTSQYTPQTNDKDERGKD*WRRSMRQFEARRSILRF 219
SP+ P S TS +P + R RR + + RR+ LRF
Sbjct: 299 TSPTSPTSPTSPTSPTSPTSPTSPGRSDQYDRRGRQVLQGRRNRLRF 345
Score = 60.1 bits (144), Expect = 1e-07
Identities = 44/78 (56%), Positives = 54/78 (69%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 183 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 235
Query: 359 YSPSQPGYSPSSTSQYTP 306
SP+ P S TS +P
Sbjct: 236 TSPTSPTSPTSPTSPTSP 253
Score = 60.1 bits (144), Expect = 1e-07
Identities = 44/78 (56%), Positives = 54/78 (69%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 186 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 238
Query: 359 YSPSQPGYSPSSTSQYTP 306
SP+ P S TS +P
Sbjct: 239 TSPTSPTSPTSPTSPTSP 256
Score = 60.1 bits (144), Expect = 1e-07
Identities = 44/78 (56%), Positives = 54/78 (69%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 189 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 241
Query: 359 YSPSQPGYSPSSTSQYTP 306
SP+ P S TS +P
Sbjct: 242 TSPTSPTSPTSPTSPTSP 259
Score = 60.1 bits (144), Expect = 1e-07
Identities = 44/78 (56%), Positives = 54/78 (69%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 192 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 244
Query: 359 YSPSQPGYSPSSTSQYTP 306
SP+ P S TS +P
Sbjct: 245 TSPTSPTSPTSPTSPTSP 262
Score = 60.1 bits (144), Expect = 1e-07
Identities = 44/78 (56%), Positives = 54/78 (69%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 195 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 247
Query: 359 YSPSQPGYSPSSTSQYTP 306
SP+ P S TS +P
Sbjct: 248 TSPTSPTSPTSPTSPTSP 265
Score = 60.1 bits (144), Expect = 1e-07
Identities = 44/78 (56%), Positives = 54/78 (69%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 198 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 250
Query: 359 YSPSQPGYSPSSTSQYTP 306
SP+ P S TS +P
Sbjct: 251 TSPTSPTSPTSPTSPTSP 268
Score = 60.1 bits (144), Expect = 1e-07
Identities = 44/78 (56%), Positives = 54/78 (69%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 201 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 253
Query: 359 YSPSQPGYSPSSTSQYTP 306
SP+ P S TS +P
Sbjct: 254 TSPTSPTSPTSPTSPTSP 271
Score = 60.1 bits (144), Expect = 1e-07
Identities = 44/78 (56%), Positives = 54/78 (69%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 204 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 256
Query: 359 YSPSQPGYSPSSTSQYTP 306
SP+ P S TS +P
Sbjct: 257 TSPTSPTSPTSPTSPTSP 274
Score = 60.1 bits (144), Expect = 1e-07
Identities = 44/78 (56%), Positives = 54/78 (69%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 207 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 259
Query: 359 YSPSQPGYSPSSTSQYTP 306
SP+ P S TS +P
Sbjct: 260 TSPTSPTSPTSPTSPTSP 277
Score = 60.1 bits (144), Expect = 1e-07
Identities = 44/78 (56%), Positives = 54/78 (69%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 210 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 262
Query: 359 YSPSQPGYSPSSTSQYTP 306
SP+ P S TS +P
Sbjct: 263 TSPTSPTSPTSPTSPTSP 280
Score = 60.1 bits (144), Expect = 1e-07
Identities = 44/78 (56%), Positives = 54/78 (69%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 213 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 265
Query: 359 YSPSQPGYSPSSTSQYTP 306
SP+ P S TS +P
Sbjct: 266 TSPTSPTSPTSPTSPTSP 283
Score = 60.1 bits (144), Expect = 1e-07
Identities = 44/78 (56%), Positives = 54/78 (69%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 216 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 268
Query: 359 YSPSQPGYSPSSTSQYTP 306
SP+ P S TS +P
Sbjct: 269 TSPTSPTSPTSPTSPTSP 286
Score = 60.1 bits (144), Expect = 1e-07
Identities = 44/78 (56%), Positives = 54/78 (69%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 219 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 271
Query: 359 YSPSQPGYSPSSTSQYTP 306
SP+ P S TS +P
Sbjct: 272 TSPTSPTSPTSPTSPTSP 289
Score = 60.1 bits (144), Expect = 1e-07
Identities = 44/78 (56%), Positives = 54/78 (69%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 222 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 274
Query: 359 YSPSQPGYSPSSTSQYTP 306
SP+ P S TS +P
Sbjct: 275 TSPTSPTSPTSPTSPTSP 292
Score = 57.4 bits (137), Expect = 6e-07
Identities = 43/77 (55%), Positives = 52/77 (67%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
P SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 181 PVSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 233
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P S TS +P
Sbjct: 234 SPTSPTSPTSPTSPTSP 250
Score = 56.2 bits (134), Expect = 1e-06
Identities = 42/77 (54%), Positives = 51/77 (66%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
P P SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 178 PRRPVSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 230
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P S TS +P
Sbjct: 231 SPTSPTSPTSPTSPTSP 247
[222][TOP]
>UniRef100_B1HHT1 Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei
S13 RepID=B1HHT1_BURPS
Length = 282
Score = 68.9 bits (167), Expect = 2e-10
Identities = 52/107 (48%), Positives = 66/107 (61%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 164 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 216
Query: 359 YSPSQPGYSPSSTSQYTPQTNDKDERGKD*WRRSMRQFEARRSILRF 219
SP+ P S TS +P + R RR + + RR+ LRF
Sbjct: 217 TSPTSPTSPTSPTSPTSPTSPTSPGRSDQYDRRGRQVLQGRRNRLRF 263
Score = 60.1 bits (144), Expect = 1e-07
Identities = 44/78 (56%), Positives = 54/78 (69%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 128 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 180
Query: 359 YSPSQPGYSPSSTSQYTP 306
SP+ P S TS +P
Sbjct: 181 TSPTSPTSPTSPTSPTSP 198
Score = 60.1 bits (144), Expect = 1e-07
Identities = 44/78 (56%), Positives = 54/78 (69%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 131 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 183
Query: 359 YSPSQPGYSPSSTSQYTP 306
SP+ P S TS +P
Sbjct: 184 TSPTSPTSPTSPTSPTSP 201
Score = 60.1 bits (144), Expect = 1e-07
Identities = 44/78 (56%), Positives = 54/78 (69%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 134 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 186
Query: 359 YSPSQPGYSPSSTSQYTP 306
SP+ P S TS +P
Sbjct: 187 TSPTSPTSPTSPTSPTSP 204
Score = 60.1 bits (144), Expect = 1e-07
Identities = 44/78 (56%), Positives = 54/78 (69%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 137 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 189
Query: 359 YSPSQPGYSPSSTSQYTP 306
SP+ P S TS +P
Sbjct: 190 TSPTSPTSPTSPTSPTSP 207
Score = 60.1 bits (144), Expect = 1e-07
Identities = 44/78 (56%), Positives = 54/78 (69%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 140 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 192
Query: 359 YSPSQPGYSPSSTSQYTP 306
SP+ P S TS +P
Sbjct: 193 TSPTSPTSPTSPTSPTSP 210
Score = 60.1 bits (144), Expect = 1e-07
Identities = 44/78 (56%), Positives = 54/78 (69%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SP+SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 146 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 198
Query: 359 YSPSQPGYSPSSTSQYTP 306
SP+ P S TS +P
Sbjct: 199 TSPTSPTSPTSPTSPTSP 216
Score = 57.4 bits (137), Expect = 6e-07
Identities = 43/77 (55%), Positives = 52/77 (67%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
P SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 126 PVSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 178
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P S TS +P
Sbjct: 179 SPTSPTSPTSPTSPTSP 195
Score = 56.2 bits (134), Expect = 1e-06
Identities = 42/77 (54%), Positives = 51/77 (66%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
P P SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S SP SP+SP SP++
Sbjct: 123 PRRPVSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 175
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P S TS +P
Sbjct: 176 SPTSPTSPTSPTSPTSP 192
[223][TOP]
>UniRef100_Q25655 RNA polymerase largest subunit (Fragment) n=1 Tax=Plasmodium
berghei RepID=Q25655_PLABE
Length = 204
Score = 67.8 bits (164), Expect = 5e-10
Identities = 42/80 (52%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGVSPDYSPSSPQFSPS 366
S YS TSP YSPTSP YSPTSP +PSSP YSP +SP S SP YS SSP + +
Sbjct: 82 SPVYSVTSPKYSPTSPKYSPTSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKN 141
Query: 365 ---TGYSPSQPGYSPSSTSQ 315
TG +P P Y S Q
Sbjct: 142 ENMTGKNPLSPAYMLQSRVQ 161
Score = 65.5 bits (158), Expect = 2e-09
Identities = 43/97 (44%), Positives = 52/97 (53%), Gaps = 25/97 (25%)
Frame = -2
Query: 539 SPSSP---------YSPTSPN------------YSPTSPSYSPTSPSYSPSSPTYSPSSP 423
SP+SP YSPTSP Y+ SP YS TSP YSP+SP YSP+SP
Sbjct: 45 SPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPKYSPTSP 104
Query: 422 YNSGVSPDYSPSSPQFSP----STGYSPSQPGYSPSS 324
+ +PSSPQ+SP S +SP+ P YS SS
Sbjct: 105 VPN------NPSSPQYSPYSITSPKFSPTSPAYSISS 135
Score = 63.9 bits (154), Expect = 7e-09
Identities = 45/98 (45%), Positives = 50/98 (51%), Gaps = 32/98 (32%)
Frame = -2
Query: 533 SSPYSPTSPN--------YSPTSPS-------------------YSPTSPSYSPSSPTYS 435
S YSPTSP YSPTSP YS TSP YSP+SP YS
Sbjct: 41 SPSYSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPKYS 100
Query: 434 PSSPY-NSGVSPDYSP---SSPQFSP-STGYSPSQPGY 336
P+SP N+ SP YSP +SP+FSP S YS S P Y
Sbjct: 101 PTSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 138
Score = 55.5 bits (132), Expect = 2e-06
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 14/76 (18%)
Frame = -2
Query: 491 SPSYSPTSPSYSPSSPT-YSPSSPYNSG------------VSPDYSPSSPQFSP-STGYS 354
SPSYSPTSP+Y+ ++ YSP+SP N +SP YS +SP++SP S YS
Sbjct: 41 SPSYSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPKYS 100
Query: 353 PSQPGYSPSSTSQYTP 306
P+ P + S+ QY+P
Sbjct: 101 PTSPVPNNPSSPQYSP 116
[224][TOP]
>UniRef100_A4RMP1 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
RepID=A4RMP1_MAGGR
Length = 1757
Score = 67.4 bits (163), Expect = 6e-10
Identities = 43/107 (40%), Positives = 57/107 (53%), Gaps = 33/107 (30%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSP--SYSPT------------SPSYSPSSPTYSPSSP---YNSG 411
SP+SP+S +YSPTSP YSPT SPS+SPSSP++ P+SP + +G
Sbjct: 1569 SPTSPFSAGYGSYSPTSPMAGYSPTSPMMDGGRYGASSPSFSPSSPSFQPTSPIMRHGAG 1628
Query: 410 VSPDYSPSSPQFSPST----------------GYSPSQPGYSPSSTS 318
S YSP+SP + P + G SP+ P YSP+S S
Sbjct: 1629 DSMGYSPTSPTYQPGSPTGGDNHYSPTSPAQFGASPTSPLYSPASPS 1675
Score = 66.2 bits (160), Expect = 1e-09
Identities = 48/102 (47%), Positives = 61/102 (59%), Gaps = 17/102 (16%)
Frame = -2
Query: 536 PSSP------YSPTSP---NYSPTSPSYSPTSPSYSP---SSPTYSPSSP-YNSGVSPD- 399
P SP YSPTSP SPTSP YSP SPS+SP +SP Y SP + S SP+
Sbjct: 1642 PGSPTGGDNHYSPTSPAQFGASPTSPLYSPASPSFSPGGATSPMYYVGSPQHASPTSPNA 1701
Query: 398 -YSPSSPQFSPSTGY-SPSQPG-YSPSSTSQYTPQTNDKDER 282
YSP+SP F S SP+ PG YSP+S S ++P++ ++ R
Sbjct: 1702 HYSPTSPSFQRSPAQASPTSPGPYSPTSPS-FSPRSPGRNNR 1742
Score = 63.2 bits (152), Expect = 1e-08
Identities = 44/93 (47%), Positives = 54/93 (58%), Gaps = 19/93 (20%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSP---TSPSY--------SPTSPS--YSPSSPTYSPSSPYNSGVSP 402
SP+SP YSP SP++SP TSP Y SPTSP+ YSP+SP++ S S SP
Sbjct: 1663 SPTSPLYSPASPSFSPGGATSPMYYVGSPQHASPTSPNAHYSPTSPSFQRSPAQASPTSP 1722
Query: 401 -DYSPSSPQFSPST----GYSPSQPGYSPSSTS 318
YSP+SP FSP + S Q YSP+S S
Sbjct: 1723 GPYSPTSPSFSPRSPGRNNRSGGQDSYSPTSPS 1755
Score = 61.6 bits (148), Expect = 3e-08
Identities = 46/95 (48%), Positives = 51/95 (53%), Gaps = 26/95 (27%)
Frame = -2
Query: 530 SPY-SPTSPNYSPTSP-SYSPTSP------SYSPSSPT--YSPSSPYNSG-----VSPDY 396
+PY S TSP PTSP S SPTSP SYSP+SP YSP+SP G SP +
Sbjct: 1552 NPYGSGTSPR--PTSPFSTSPTSPFSAGYGSYSPTSPMAGYSPTSPMMDGGRYGASSPSF 1609
Query: 395 SPSSPQFSP-----------STGYSPSQPGYSPSS 324
SPSSP F P S GYSP+ P Y P S
Sbjct: 1610 SPSSPSFQPTSPIMRHGAGDSMGYSPTSPTYQPGS 1644
[225][TOP]
>UniRef100_P13983 Extensin n=1 Tax=Nicotiana tabacum RepID=EXTN_TOBAC
Length = 620
Score = 67.4 bits (163), Expect = 6e-10
Identities = 41/87 (47%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPS--YSPTSPSYSPS-----SPTYSPSSPYNSGVSPDYSPSSPQ 378
PS YSP P YSP PS YSP P+YSPS +PT+SP P S P YSP P
Sbjct: 278 PSPTYSPPPPTYSPPPPSPIYSPPPPAYSPSPPPTPTPTFSPPPPAYS-PPPTYSPPPPT 336
Query: 377 FSP---STGYSPSQPGYSPSSTSQYTP 306
+ P S YSP P YSP Y+P
Sbjct: 337 YLPLPSSPIYSPPPPVYSPPPPPSYSP 363
Score = 65.5 bits (158), Expect = 2e-09
Identities = 38/84 (45%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYSPT---SPSYSPSSPTYSPS--SPYNSGVSPDYSPSSPQFS 372
PS P P YSP P+Y+ + SP+YSP PTYSP SP S P YSPS P +
Sbjct: 254 PSPRRQPQPPTYSPPPPAYAQSPQPSPTYSPPPPTYSPPPPSPIYSPPPPAYSPSPPP-T 312
Query: 371 PSTGYSPSQPGYSPSSTSQYTPQT 300
P+ +SP P YSP T P T
Sbjct: 313 PTPTFSPPPPAYSPPPTYSPPPPT 336
Score = 65.1 bits (157), Expect = 3e-09
Identities = 38/81 (46%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Frame = -2
Query: 536 PSSPYSPT-SPNYSPTSPSYSPTSPS--YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 366
P+ SP SP YSP P+YSP PS YSP P YSPS P +P +SP P +SP
Sbjct: 270 PAYAQSPQPSPTYSPPPPTYSPPPPSPIYSPPPPAYSPSPPPTP--TPTFSPPPPAYSPP 327
Query: 365 TGYSPSQPGYSPSSTSQ-YTP 306
YSP P Y P +S Y+P
Sbjct: 328 PTYSPPPPTYLPLPSSPIYSP 348
Score = 62.4 bits (150), Expect = 2e-08
Identities = 38/91 (41%), Positives = 44/91 (48%), Gaps = 16/91 (17%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYS---PSSPTYSPSSP-YNSGVSPDYSPSSPQFS--- 372
SP P P YSP P+YSP P+Y+ P PTYSP P Y+ P YSP P +S
Sbjct: 400 SPPLPAPPTYSPPPPTYSPPPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPP 459
Query: 371 --------PSTGYSPSQPGYSPSSTSQ-YTP 306
P YSP P YSP S Y+P
Sbjct: 460 PAYAQPPPPPPTYSPPPPAYSPPPPSPIYSP 490
Score = 61.6 bits (148), Expect = 3e-08
Identities = 36/94 (38%), Positives = 39/94 (41%), Gaps = 17/94 (18%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVS------PDYSPSSPQF 375
P YSP P Y P P SP PS+SP PTY S P S P YSP P +
Sbjct: 357 PPPSYSPPPPTYLPPPPPSSPPPPSFSPPPPTYEQSPPPPPAYSPPLPAPPTYSPPPPTY 416
Query: 374 SP-----------STGYSPSQPGYSPSSTSQYTP 306
SP YSP P YSP Y+P
Sbjct: 417 SPPPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSP 450
Score = 58.9 bits (141), Expect = 2e-07
Identities = 36/78 (46%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPT-----SPSYSPTSPSYSPSSPTYSPSSPYNSGV--SPDYSPSSPQ 378
PS YSP P YSP+ +P++SP P+YSP PTYSP P + SP YSP P
Sbjct: 294 PSPIYSPPPPAYSPSPPPTPTPTFSPPPPAYSPP-PTYSPPPPTYLPLPSSPIYSPPPPV 352
Query: 377 FS--PSTGYSPSQPGYSP 330
+S P YSP P Y P
Sbjct: 353 YSPPPPPSYSPPPPTYLP 370
Score = 58.9 bits (141), Expect = 2e-07
Identities = 35/95 (36%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYS-------------PTSPSYSPSSPTYSPSSPYNS---GVS 405
P P SP P++SP P+Y P P+YSP PTYSP P + +
Sbjct: 371 PPPPSSPPPPSFSPPPPTYEQSPPPPPAYSPPLPAPPTYSPPPPTYSPPPPTYAQPPPLP 430
Query: 404 PDYSPSSPQFS--PSTGYSPSQPGYSPSSTSQYTP 306
P YSP P +S P YSP P YSP + P
Sbjct: 431 PTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQP 465
Score = 57.8 bits (138), Expect = 5e-07
Identities = 38/86 (44%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGVSPDYS---PSSPQFS 372
PSSP YSP P YSP P SYSP P+Y P P SP P S P Y P P +S
Sbjct: 341 PSSPIYSPPPPVYSPPPPPSYSPPPPTYLPPPPPSSPPPPSFSPPPPTYEQSPPPPPAYS 400
Query: 371 P----STGYSPSQPGYSPSSTSQYTP 306
P YSP P YSP + P
Sbjct: 401 PPLPAPPTYSPPPPTYSPPPPTYAQP 426
Score = 57.4 bits (137), Expect = 6e-07
Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSY--SPSSPTYSPSSP-YNSGVSPDYSPSSPQF-S 372
+P+ +SP P YSP P+YSP P+Y PSSP YSP P Y+ P YSP P +
Sbjct: 312 TPTPTFSPPPPAYSP-PPTYSPPPPTYLPLPSSPIYSPPPPVYSPPPPPSYSPPPPTYLP 370
Query: 371 PSTGYSPSQPGYSP 330
P SP P +SP
Sbjct: 371 PPPPSSPPPPSFSP 384
Score = 57.0 bits (136), Expect = 8e-07
Identities = 34/80 (42%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
Frame = -2
Query: 539 SPSSPYSPTSPNY--SPTSPSYS--------PTSPSYSPSSPTYSPSSPYNSGVSPDYSP 390
SP YSP P Y P+SP YS P PSYSP PTY P P +S P +SP
Sbjct: 325 SPPPTYSPPPPTYLPLPSSPIYSPPPPVYSPPPPPSYSPPPPTYLPPPPPSSPPPPSFSP 384
Query: 389 SSPQFSPSTGYSPSQPGYSP 330
P + S P P YSP
Sbjct: 385 PPPTYEQS---PPPPPAYSP 401
Score = 55.1 bits (131), Expect = 3e-06
Identities = 33/83 (39%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP---YNSGVSPDYSPSSPQFSP- 369
P+ ++P P + P+ + P SP P PTYSP P + SP YSP P +SP
Sbjct: 235 PTHRHAP--PTHQPSPLRHLPPSPRRQPQPPTYSPPPPAYAQSPQPSPTYSPPPPTYSPP 292
Query: 368 --STGYSPSQPGYSPSSTSQYTP 306
S YSP P YSPS TP
Sbjct: 293 PPSPIYSPPPPAYSPSPPPTPTP 315
Score = 55.1 bits (131), Expect = 3e-06
Identities = 32/70 (45%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Frame = -2
Query: 518 PTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYNS---GVSPDYSPSSPQFS---PSTG 360
P P YSP P+YSP P +YSP PTYSP P + P YSP P +S PS
Sbjct: 428 PLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYSPPPPSPI 487
Query: 359 YSPSQPGYSP 330
YSP P P
Sbjct: 488 YSPPPPQVQP 497
Score = 54.3 bits (129), Expect = 5e-06
Identities = 36/83 (43%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSY--SPTSPSYSPSSPTYSPSSPYN-SGVSPDYSPSSPQFS-P 369
P YSP P YSP P+Y P+SP YSP P YSP P + S P Y P P S P
Sbjct: 320 PPPAYSPP-PTYSPPPPTYLPLPSSPIYSPPPPVYSPPPPPSYSPPPPTYLPPPPPSSPP 378
Query: 368 STGYSPSQPGY--SPSSTSQYTP 306
+SP P Y SP Y+P
Sbjct: 379 PPSFSPPPPTYEQSPPPPPAYSP 401
[226][TOP]
>UniRef100_C6ZIW1 RNA polymerase II (Fragment) n=1 Tax=Plasmodium ovale
RepID=C6ZIW1_9APIC
Length = 168
Score = 67.0 bits (162), Expect = 8e-10
Identities = 38/69 (55%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSGVSPDYSPSSPQFSP-STGYSP 351
Y+ SP YS TSP YSPTSP YSP+SP +PSSP++ SP YS +SP+FSP S YS
Sbjct: 43 YNVMSPVYSVTSPKYSPTSPQYSPTSPVPNNPSSPHSPHYSP-YSITSPKFSPTSPAYSI 101
Query: 350 SQPGYSPSS 324
S P Y ++
Sbjct: 102 SSPVYDKNA 110
Score = 63.9 bits (154), Expect = 7e-09
Identities = 39/83 (46%), Positives = 46/83 (55%), Gaps = 16/83 (19%)
Frame = -2
Query: 524 YSPTSPN------------YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP 381
YSPTSP Y+ SP YS TSP YSP+SP YSP+SP + S SP SP
Sbjct: 24 YSPTSPKNHITGDVHTNMKYNVMSPVYSVTSPKYSPTSPQYSPTSPVPNNPS---SPHSP 80
Query: 380 QFSP----STGYSPSQPGYSPSS 324
+SP S +SP+ P YS SS
Sbjct: 81 HYSPYSITSPKFSPTSPAYSISS 103
Score = 61.6 bits (148), Expect = 3e-08
Identities = 41/89 (46%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSP----SYSPSSPTYSP---SSPYNSGVSPDYSPSSPQF 375
S YS TSP YSPTSP YSPTSP SP SP YSP +SP S SP YS SSP +
Sbjct: 47 SPVYSVTSPKYSPTSPQYSPTSPVPNNPSSPHSPHYSPYSITSPKFSPTSPAYSISSPVY 106
Query: 374 SPSTGYS--PSQPGYSPSSTSQYTPQTND 294
+ + P P Y S Q D
Sbjct: 107 DKNAPINKHPLSPAYILQSPVQVKQHIQD 135
Score = 57.8 bits (138), Expect = 5e-07
Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 4/56 (7%)
Frame = -2
Query: 536 PSSPYSPTSPNYSP---TSPSYSPTSPSYSPSSPTYSPSSPYNS-GVSPDYSPSSP 381
P++P SP SP+YSP TSP +SPTSP+YS SSP Y ++P N +SP Y SP
Sbjct: 71 PNNPSSPHSPHYSPYSITSPKFSPTSPAYSISSPVYDKNAPINKHPLSPAYILQSP 126
[227][TOP]
>UniRef100_UPI00005878B7 PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus
purpuratus RepID=UPI00005878B7
Length = 374
Score = 66.6 bits (161), Expect = 1e-09
Identities = 28/76 (36%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPS 348
Y+ T+P+Y+ ++PSY+ ++PSY+ S P+Y+ S PY + + Y+ S+P ++ ST Y+ +
Sbjct: 148 YTSTTPSYTASTPSYATSTPSYATSRPSYATSRPYFTSTTSSYTASTPSYTESTASYTTT 207
Query: 347 QPGYSPSSTSQYTPQT 300
QP +P +T +P+T
Sbjct: 208 QPSAAPPTTMTSSPRT 223
Score = 63.9 bits (154), Expect = 7e-09
Identities = 30/82 (36%), Positives = 51/82 (62%), Gaps = 7/82 (8%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYSPS 348
Y+ + P+Y+ + PSY+ ++PSY S+P Y ++PY + +P Y+ S+P ++ ST Y+ S
Sbjct: 113 YTESRPSYATSRPSYTTSTPSYPTSTPYYRTTTPYYTSTTPSYTASTPSYATSTPSYATS 172
Query: 347 QPGYS------PSSTSQYTPQT 300
+P Y+ S+TS YT T
Sbjct: 173 RPSYATSRPYFTSTTSSYTAST 194
Score = 63.5 bits (153), Expect = 9e-09
Identities = 33/78 (42%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Frame = -2
Query: 527 PYSPTS-PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-GYS 354
PY TS P Y+ ++PSY ++P Y+ S+P+Y S+PY + P Y+ S+P ++ ST Y+
Sbjct: 20 PYYTTSRPPYTTSTPSYPTSTPYYTTSTPSYPTSTPYYTTSRPPYTTSTPSYTASTPSYT 79
Query: 353 PSQPGYSPSSTSQYTPQT 300
S+P Y P+ST YT T
Sbjct: 80 ESRPSY-PTSTPYYTTST 96
Score = 62.4 bits (150), Expect = 2e-08
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Frame = -2
Query: 533 SSPYSPTS-PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST-G 360
S+P PTS P Y T+P Y+ T+PSY+ S+P+Y+ S+P + P Y+ S P F+ +T
Sbjct: 130 STPSYPTSTPYYRTTTPYYTSTTPSYTASTPSYATSTPSYATSRPSYATSRPYFTSTTSS 189
Query: 359 YSPSQPGYSPSSTSQYTPQ 303
Y+ S P Y+ S+ S T Q
Sbjct: 190 YTASTPSYTESTASYTTTQ 208
Score = 60.8 bits (146), Expect = 6e-08
Identities = 27/74 (36%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = -2
Query: 527 PYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYSP 351
PY+ ++P+Y+ ++PSY+ + PSY S+P Y+ S+PY + + Y+ S+P ++ S Y+
Sbjct: 63 PYTTSTPSYTASTPSYTESRPSYPTSTPYYTTSTPYYTLTTSSYTASTPSYTESRPSYAT 122
Query: 350 SQPGYSPSSTSQYT 309
S+P Y+ S+ S T
Sbjct: 123 SRPSYTTSTPSYPT 136
Score = 59.3 bits (142), Expect = 2e-07
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = -2
Query: 533 SSPYSPTS-PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
S+P PTS P Y+ ++PSY ++P Y+ S P Y+ S+P + +P Y+ S P + ST Y
Sbjct: 32 STPSYPTSTPYYTTSTPSYPTSTPYYTTSRPPYTTSTPSYTASTPSYTESRPSYPTSTPY 91
Query: 356 SPSQPGYSPSSTSQYTPQT 300
+ Y +TS YT T
Sbjct: 92 YTTSTPYYTLTTSSYTAST 110
Score = 57.8 bits (138), Expect = 5e-07
Identities = 26/77 (33%), Positives = 46/77 (59%)
Frame = -2
Query: 527 PYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPS 348
PY+ ++P+Y ++P Y+ ++PSY S+P Y+ S P + +P Y+ S+P ++ S P+
Sbjct: 28 PYTTSTPSYPTSTPYYTTSTPSYPTSTPYYTTSRPPYTTSTPSYTASTPSYTESRPSYPT 87
Query: 347 QPGYSPSSTSQYTPQTN 297
Y +ST YT T+
Sbjct: 88 STPYYTTSTPYYTLTTS 104
Score = 56.6 bits (135), Expect = 1e-06
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = -2
Query: 533 SSPYSPTS-PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
S P PTS P Y+ ++P Y+ T+ SY+ S+P+Y+ S P + P Y+ S+P + ST Y
Sbjct: 81 SRPSYPTSTPYYTTSTPYYTLTTSSYTASTPSYTESRPSYATSRPSYTTSTPSYPTSTPY 140
Query: 356 SPSQPGYSPSSTSQYTPQT 300
+ Y S+T YT T
Sbjct: 141 YRTTTPYYTSTTPSYTAST 159
Score = 54.3 bits (129), Expect = 5e-06
Identities = 24/75 (32%), Positives = 43/75 (57%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQ 345
Y+ ++P+Y ++P Y T+P Y+ ++P+Y+ S+P + +P Y+ S P ++ S Y S
Sbjct: 127 YTTSTPSYPTSTPYYRTTTPYYTSTTPSYTASTPSYATSTPSYATSRPSYATSRPYFTST 186
Query: 344 PGYSPSSTSQYTPQT 300
+ST YT T
Sbjct: 187 TSSYTASTPSYTEST 201
[228][TOP]
>UniRef100_B9G524 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9G524_ORYSJ
Length = 536
Score = 66.6 bits (161), Expect = 1e-09
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 363
PS P P+ P+Y P+ PSY P+ P Y+P P Y+P P P+YSP P + PS
Sbjct: 330 PSPPDIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPP 389
Query: 362 GYSPSQPGYSPSSTSQYTPQ 303
Y+P P Y P S +Y P+
Sbjct: 390 QYAPQPPSYVP-SPPEYAPE 408
Score = 65.9 bits (159), Expect = 2e-09
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
PS P Y+P P Y+P P P+ P YSP P+Y PS P + P Y PS P+++P
Sbjct: 351 PSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPEYAPEPP 410
Query: 359 -YSPSQPGYSPSSTSQYTPQ 303
Y+P PG +P S +Y P+
Sbjct: 411 VYAPYPPGITP-SPPEYAPE 429
Score = 61.6 bits (148), Expect = 3e-08
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
PS P YSP P+Y P+ P Y+P PSY PS P Y+P P + P +PS P+++P
Sbjct: 372 PSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPEYAPEPPVYAPYPPGITPSPPEYAPEP- 430
Query: 359 YSPSQPG 339
P PG
Sbjct: 431 -PPGPPG 436
Score = 58.9 bits (141), Expect = 2e-07
Identities = 35/82 (42%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSP--TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 366
PS P +P+ P +P + P P+ PSY PS P+Y PS P + P Y+P P PS
Sbjct: 314 PSPPEVTPSPPEITPYPSPPDIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPS 373
Query: 365 -TGYSPSQPGYSPSSTSQYTPQ 303
YSP P Y P S QY PQ
Sbjct: 374 PPEYSPEPPSYVP-SPPQYAPQ 394
Score = 55.5 bits (132), Expect = 2e-06
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPST 363
SP P Y P+ P Y+P PSY P+ P Y+P P Y+P P + P+Y+P P P
Sbjct: 378 SPEPPSYVPSPPQYAPQPPSYVPSPPEYAPEPPVYAPYPPGITPSPPEYAPEPPPGPPGR 437
Query: 362 GYSPSQPGYSPSS 324
+ G P++
Sbjct: 438 WWRVPAAGGVPAA 450
[229][TOP]
>UniRef100_Q7XRB2 OSJNBa0006B20.10 protein n=3 Tax=Oryza sativa RepID=Q7XRB2_ORYSJ
Length = 335
Score = 66.6 bits (161), Expect = 1e-09
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ---FSPST 363
S YSP SP SP Y+P SPS +SP Y+P SP SPDY+P+SP + S
Sbjct: 117 SPDYSPESPPRRAASPDYTPASPSRRAASPDYTPESPPRRAASPDYTPASPSRRAAASSP 176
Query: 362 GYSPSQPGYSPSSTSQYTPQT 300
Y+P P +++ Y+P T
Sbjct: 177 DYTPESPPRRRAASPDYSPST 197
Score = 64.7 bits (156), Expect = 4e-09
Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS-PQFSPSTGY 357
S Y+P SP SP YSP SP +SP Y+P SP SPDYSP S P+ + S Y
Sbjct: 75 SPDYTPESPPRRAASPDYSPASPPRRAASPDYTPESPPRRAASPDYSPESPPRRAASPDY 134
Query: 356 SPSQPGYSPSSTSQYTPQT 300
+P+ P +S YTP++
Sbjct: 135 TPASPSRRAAS-PDYTPES 152
Score = 64.7 bits (156), Expect = 4e-09
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 15/93 (16%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP--------- 381
S YSP++P SP YSP++P +SP YSPS+P SPDY+P SP
Sbjct: 190 SPDYSPSTPPRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYTPMSPPRRAASPDY 249
Query: 380 -QFSP-----STGYSPSQPGYSPSSTSQYTPQT 300
Q +P S Y+PS P +++ YTP T
Sbjct: 250 TQMTPPRRAASPDYTPSTPPPPRAASPDYTPST 282
Score = 64.3 bits (155), Expect = 5e-09
Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 16/94 (17%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSP-QFSPSTGY 357
S YSP SP SP Y+P SP +SP YSP SP SPDY+P+SP + + S Y
Sbjct: 89 SPDYSPASPPRRAASPDYTPESPPRRAASPDYSPESPPRRAASPDYTPASPSRRAASPDY 148
Query: 356 SP-------SQPGYSPSSTSQ--------YTPQT 300
+P + P Y+P+S S+ YTP++
Sbjct: 149 TPESPPRRAASPDYTPASPSRRAAASSPDYTPES 182
Score = 61.6 bits (148), Expect = 3e-08
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 12/91 (13%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSP--------TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
SPS + +SP+Y+P SP YSP++P +SP YSPS+P SPDYSPS+
Sbjct: 166 SPSRRAAASSPDYTPESPPRRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYSPST 225
Query: 383 -PQFSPSTGYSPSQP---GYSPSSTSQYTPQ 303
P+ + S Y+P P SP T P+
Sbjct: 226 PPRRAASPDYTPMSPPRRAASPDYTQMTPPR 256
Score = 59.3 bits (142), Expect = 2e-07
Identities = 38/89 (42%), Positives = 48/89 (53%), Gaps = 11/89 (12%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPS---------YSPTS-PSYSPSSPTYSPSSPYNSGVSPDYSPSS 384
S P SP+Y+P SPS Y+P S P +SP YSPS+P SPDYSPS+
Sbjct: 152 SPPRRAASPDYTPASPSRRAAASSPDYTPESPPRRRAASPDYSPSTPPRRAASPDYSPST 211
Query: 383 -PQFSPSTGYSPSQPGYSPSSTSQYTPQT 300
P+ + S YSPS P +S YTP +
Sbjct: 212 PPRRAASPDYSPSTPPRRAAS-PDYTPMS 239
Score = 58.5 bits (140), Expect = 3e-07
Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 24/102 (23%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSP-------SSPTYSPSSPYN--SGVSPDYSPSSP 381
S P SP+Y+P SPS SP Y+P +SP Y+P+SP + SPDY+P SP
Sbjct: 124 SPPRRAASPDYTPASPSRRAASPDYTPESPPRRAASPDYTPASPSRRAAASSPDYTPESP 183
Query: 380 --QFSPSTGYSPS-------QPGYSPS------STSQYTPQT 300
+ + S YSPS P YSPS ++ Y+P T
Sbjct: 184 PRRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYSPST 225
Score = 56.2 bits (134), Expect = 1e-06
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 16/93 (17%)
Frame = -2
Query: 539 SPSSP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPS- 387
SPS+P YSP++P SP Y+P SP +SP Y+ +P SPDY+PS
Sbjct: 208 SPSTPPRRAASPDYSPSTPPRRAASPDYTPMSPPRRAASPDYTQMTPPRRAASPDYTPST 267
Query: 386 -------SPQFSPSTGYSPSQPGYSPSSTSQYT 309
SP ++PST PS P PS+ +T
Sbjct: 268 PPPPRAASPDYTPST--PPSSP--LPSAAESFT 296
Score = 53.9 bits (128), Expect = 7e-06
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 14/101 (13%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSS-PQFSPSTGY 357
SS P SP+Y+P SP P +SP Y+P SP SPDYSP+S P+ + S Y
Sbjct: 53 SSCCPPPSPDYTPASP------PHRRAASPDYTPESPPRRAASPDYSPASPPRRAASPDY 106
Query: 356 SP-------SQPGYSPSS------TSQYTPQTNDKDERGKD 273
+P + P YSP S + YTP + + D
Sbjct: 107 TPESPPRRAASPDYSPESPPRRAASPDYTPASPSRRAASPD 147
[230][TOP]
>UniRef100_Q7RJS0 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii
RepID=Q7RJS0_PLAYO
Length = 2312
Score = 66.6 bits (161), Expect = 1e-09
Identities = 44/97 (45%), Positives = 52/97 (53%), Gaps = 25/97 (25%)
Frame = -2
Query: 539 SPSSP---------YSPTSPN------------YSPTSPSYSPTSPSYSPSSPTYSPSSP 423
SP+SP YSPTSP Y+ SP YS TSP YSP+SP YSPSSP
Sbjct: 2153 SPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSSP 2212
Query: 422 YNSGVSPDYSPSSPQFSP----STGYSPSQPGYSPSS 324
+ +PSSPQ+SP S +SP+ P YS SS
Sbjct: 2213 VPN------NPSSPQYSPYSITSPKFSPTSPAYSISS 2243
Score = 65.1 bits (157), Expect = 3e-09
Identities = 46/98 (46%), Positives = 50/98 (51%), Gaps = 32/98 (32%)
Frame = -2
Query: 533 SSPYSPTSPN--------YSPTSPS-------------------YSPTSPSYSPSSPTYS 435
S YSPTSP YSPTSP YS TSP YSP+SP YS
Sbjct: 2149 SPSYSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYS 2208
Query: 434 PSSPY-NSGVSPDYSP---SSPQFSP-STGYSPSQPGY 336
PSSP N+ SP YSP +SP+FSP S YS S P Y
Sbjct: 2209 PSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 2246
Score = 64.3 bits (155), Expect = 5e-09
Identities = 40/80 (50%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGVSPDYSPSSPQFSPS 366
S YS TSP YSPTSP YSP+SP +PSSP YSP +SP S SP YS SSP + +
Sbjct: 2190 SPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKN 2249
Query: 365 ---TGYSPSQPGYSPSSTSQ 315
G +P P Y S Q
Sbjct: 2250 ENMAGKNPLSPAYMLQSRVQ 2269
Score = 60.8 bits (146), Expect = 6e-08
Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 15/78 (19%)
Frame = -2
Query: 512 SPNYSPTSPSYSPTSPS-YSPSSP------------TYSPSSPYNSGVSPDYSPSSPQFS 372
SP+YSPTSP+Y+ + + YSP+SP Y+ SP S SP YSP+SPQ+S
Sbjct: 2149 SPSYSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYS 2208
Query: 371 PSTGY--SPSQPGYSPSS 324
PS+ +PS P YSP S
Sbjct: 2209 PSSPVPNNPSSPQYSPYS 2226
[231][TOP]
>UniRef100_Q1WKU0 Putative RNA polymerase II 215 kD subunit (Fragment) n=2
Tax=melanogaster subgroup RepID=Q1WKU0_DROYA
Length = 766
Score = 66.6 bits (161), Expect = 1e-09
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SPSSP SP Y P SPS SPSYSP+SP Y+ SSP G SP+YSPSSP +SP++
Sbjct: 699 SPSSPGPSMSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSP 752
Query: 359 -YSPSQPGYSPSS 324
Y+ + P Y+ ++
Sbjct: 753 LYASASPRYASTT 765
Score = 65.1 bits (157), Expect = 3e-09
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 16/85 (18%)
Frame = -2
Query: 530 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 381
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 667 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSP 726
Query: 380 QFSPST------GYSPSQPGYSPSS 324
++ S+ YSPS P YSP+S
Sbjct: 727 NYTASSPGGASPNYSPSSPNYSPTS 751
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 6/59 (10%)
Frame = -2
Query: 539 SPSSPYSPT-SPNYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGVSPDYSPSSP 381
SP P SP+ SP+YSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P
Sbjct: 708 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTP 766
[232][TOP]
>UniRef100_C6F098 RNA polymerase II (Fragment) n=2 Tax=Plasmodium vinckei
RepID=C6F098_PLAVN
Length = 161
Score = 66.6 bits (161), Expect = 1e-09
Identities = 44/97 (45%), Positives = 52/97 (53%), Gaps = 25/97 (25%)
Frame = -2
Query: 539 SPSSP---------YSPTSPN------------YSPTSPSYSPTSPSYSPSSPTYSPSSP 423
SP+SP YSPTSP Y+ SP YS TSP YSP+SP YSPSSP
Sbjct: 2 SPTSPTYNANNNAYYSPTSPKNQAGDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSSP 61
Query: 422 YNSGVSPDYSPSSPQFSP----STGYSPSQPGYSPSS 324
+ +PSSPQ+SP S +SP+ P YS SS
Sbjct: 62 VPN------NPSSPQYSPYSITSPKFSPTSPAYSISS 92
Score = 65.5 bits (158), Expect = 2e-09
Identities = 46/98 (46%), Positives = 50/98 (51%), Gaps = 32/98 (32%)
Frame = -2
Query: 524 YSPTSPN--------YSPTSPS-------------------YSPTSPSYSPSSPTYSPSS 426
YSPTSP YSPTSP YS TSP YSP+SP YSPSS
Sbjct: 1 YSPTSPTYNANNNAYYSPTSPKNQAGDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSS 60
Query: 425 PY-NSGVSPDYSP---SSPQFSP-STGYSPSQPGYSPS 327
P N+ SP YSP +SP+FSP S YS S P Y S
Sbjct: 61 PVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKS 98
Score = 65.5 bits (158), Expect = 2e-09
Identities = 41/80 (51%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGVSPDYSPSSPQFSPS 366
S YS TSP YSPTSP YSP+SP +PSSP YSP +SP S SP YS SSP + S
Sbjct: 39 SPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKS 98
Query: 365 ---TGYSPSQPGYSPSSTSQ 315
G +P P Y S Q
Sbjct: 99 ENMAGKNPLSPAYMLQSRVQ 118
[233][TOP]
>UniRef100_C6F093 RNA polymerase II (Fragment) n=2 Tax=Plasmodium yoelii
RepID=C6F093_PLAYO
Length = 161
Score = 66.6 bits (161), Expect = 1e-09
Identities = 44/97 (45%), Positives = 52/97 (53%), Gaps = 25/97 (25%)
Frame = -2
Query: 539 SPSSP---------YSPTSPN------------YSPTSPSYSPTSPSYSPSSPTYSPSSP 423
SP+SP YSPTSP Y+ SP YS TSP YSP+SP YSPSSP
Sbjct: 2 SPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSSP 61
Query: 422 YNSGVSPDYSPSSPQFSP----STGYSPSQPGYSPSS 324
+ +PSSPQ+SP S +SP+ P YS SS
Sbjct: 62 VPN------NPSSPQYSPYSITSPKFSPTSPAYSISS 92
Score = 64.3 bits (155), Expect = 5e-09
Identities = 45/95 (47%), Positives = 49/95 (51%), Gaps = 32/95 (33%)
Frame = -2
Query: 524 YSPTSPN--------YSPTSPS-------------------YSPTSPSYSPSSPTYSPSS 426
YSPTSP YSPTSP YS TSP YSP+SP YSPSS
Sbjct: 1 YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSS 60
Query: 425 PY-NSGVSPDYSP---SSPQFSP-STGYSPSQPGY 336
P N+ SP YSP +SP+FSP S YS S P Y
Sbjct: 61 PVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 95
Score = 64.3 bits (155), Expect = 5e-09
Identities = 40/80 (50%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGVSPDYSPSSPQFSPS 366
S YS TSP YSPTSP YSP+SP +PSSP YSP +SP S SP YS SSP + +
Sbjct: 39 SPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKN 98
Query: 365 ---TGYSPSQPGYSPSSTSQ 315
G +P P Y S Q
Sbjct: 99 ENMAGKNPLSPAYMLQSRVQ 118
[234][TOP]
>UniRef100_C6F091 RNA polymerase II (Fragment) n=1 Tax=Plasmodium berghei
RepID=C6F091_PLABE
Length = 161
Score = 66.6 bits (161), Expect = 1e-09
Identities = 44/97 (45%), Positives = 52/97 (53%), Gaps = 25/97 (25%)
Frame = -2
Query: 539 SPSSP---------YSPTSPN------------YSPTSPSYSPTSPSYSPSSPTYSPSSP 423
SP+SP YSPTSP Y+ SP YS TSP YSP+SP YSPSSP
Sbjct: 2 SPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSSP 61
Query: 422 YNSGVSPDYSPSSPQFSP----STGYSPSQPGYSPSS 324
+ +PSSPQ+SP S +SP+ P YS SS
Sbjct: 62 VPN------NPSSPQYSPYSITSPKFSPTSPAYSISS 92
Score = 66.2 bits (160), Expect = 1e-09
Identities = 41/80 (51%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGVSPDYSPSSPQFSPS 366
S YS TSP YSPTSP YSP+SP +PSSP YSP +SP S SP YS SSP + +
Sbjct: 39 SPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKN 98
Query: 365 ---TGYSPSQPGYSPSSTSQ 315
TG +P P Y S Q
Sbjct: 99 ENMTGKNPLSPAYMLQSRVQ 118
Score = 64.3 bits (155), Expect = 5e-09
Identities = 45/95 (47%), Positives = 49/95 (51%), Gaps = 32/95 (33%)
Frame = -2
Query: 524 YSPTSPN--------YSPTSPS-------------------YSPTSPSYSPSSPTYSPSS 426
YSPTSP YSPTSP YS TSP YSP+SP YSPSS
Sbjct: 1 YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSS 60
Query: 425 PY-NSGVSPDYSP---SSPQFSP-STGYSPSQPGY 336
P N+ SP YSP +SP+FSP S YS S P Y
Sbjct: 61 PVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 95
[235][TOP]
>UniRef100_A0E2M3 Chromosome undetermined scaffold_75, whole genome shotgun sequence
n=1 Tax=Paramecium tetraurelia RepID=A0E2M3_PARTE
Length = 288
Score = 66.2 bits (160), Expect = 1e-09
Identities = 34/88 (38%), Positives = 35/88 (39%), Gaps = 10/88 (11%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYSPT----------SPSYSPSSPTYSPSSPYNSGVSPDYSPS 387
P PY P P Y PT P Y P P Y P P Y P P P Y P
Sbjct: 156 PQQPYPPQQPGY-PTQPGYPPQPGYPAQPYPQQPGYPPQQPGYPPQQPGYPPQQPGYPPQ 214
Query: 386 SPQFSPSTGYSPSQPGYSPSSTSQYTPQ 303
P + P GY P QPGY P Y PQ
Sbjct: 215 QPGYPPQPGYPPQQPGYPPQQPG-YPPQ 241
Score = 61.2 bits (147), Expect = 4e-08
Identities = 33/80 (41%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
P P Y P P Y P P Y P P Y P P Y P P P Y P P + P
Sbjct: 192 PQQPGYPPQQPGYPPQQPGYPPQQPGYPPQ-PGYPPQQPGYPPQQPGYPPQQPGYPPQQP 250
Query: 362 GYSPSQPGYSPSSTSQYTPQ 303
GY P QPGY QY PQ
Sbjct: 251 GYPPQQPGY---PAQQYPPQ 267
Score = 55.5 bits (132), Expect = 2e-06
Identities = 27/67 (40%), Positives = 29/67 (43%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
P P P P Y P P Y P P Y P P Y P P P Y + Q+ P GY
Sbjct: 213 PQQPGYPPQPGYPPQQPGYPPQQPGYPPQQPGYPPQQPGYPPQQPGY--PAQQYPPQQGY 270
Query: 356 SPSQPGY 336
P QPGY
Sbjct: 271 -PPQPGY 276
[236][TOP]
>UniRef100_UPI0000D9F0D9 PREDICTED: similar to zinc finger protein 239 (predicted) n=1
Tax=Macaca mulatta RepID=UPI0000D9F0D9
Length = 650
Score = 65.5 bits (158), Expect = 2e-09
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
P SP + P SP + P SP + SP P SP ++P SP + SP++ SP++ P S
Sbjct: 184 PQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSP 243
Query: 362 GYSPSQPGYSPSSTSQYTPQ 303
GY P P Y S +S+Y Q
Sbjct: 244 GYEPRSPSYE-SESSRYESQ 262
Score = 58.9 bits (141), Expect = 2e-07
Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Frame = -2
Query: 518 PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF--------SPST 363
P SP + P SP + P SP + P SP + SP SP+++P SP+ S S
Sbjct: 177 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 236
Query: 362 GYSPSQPGYSPSSTS 318
Y P PGY P S S
Sbjct: 237 RYEPQSPGYEPRSPS 251
Score = 56.2 bits (134), Expect = 1e-06
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = -2
Query: 497 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTS 318
P SP + P SP + P SP + P SP SP P SP+F+P + S SQ S +
Sbjct: 177 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 236
Query: 317 QYTPQTNDKDER 282
+Y PQ+ + R
Sbjct: 237 RYEPQSPGYEPR 248
[237][TOP]
>UniRef100_Q4Y307 Putative uncharacterized protein n=1 Tax=Plasmodium chabaudi
RepID=Q4Y307_PLACH
Length = 133
Score = 65.5 bits (158), Expect = 2e-09
Identities = 41/80 (51%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGVSPDYSPSSPQFSPS 366
S YS TSP YSPTSP YSP+SP +PSSP YSP +SP S SP YS SSP + S
Sbjct: 11 SXVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKS 70
Query: 365 ---TGYSPSQPGYSPSSTSQ 315
G +P P Y S Q
Sbjct: 71 ENMAGKNPLSPAYMLQSRVQ 90
Score = 61.6 bits (148), Expect = 3e-08
Identities = 37/67 (55%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-STGYSPS 348
Y+ S YS TSP YSPTSP YSPSSP P++P + SP YS +SP+FSP S YS S
Sbjct: 7 YNIMSXVYSVTSPKYSPTSPQYSPSSPV--PNNPSSPQYSP-YSITSPKFSPTSPAYSIS 63
Query: 347 QPGYSPS 327
P Y S
Sbjct: 64 SPVYDKS 70
Score = 58.2 bits (139), Expect = 4e-07
Identities = 33/64 (51%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Frame = -2
Query: 503 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP----STGYSPSQPGY 336
Y+ S YS TSP YSP+SP YSPSSP + +PSSPQ+SP S +SP+ P Y
Sbjct: 7 YNIMSXVYSVTSPKYSPTSPQYSPSSPVPN------NPSSPQYSPYSITSPKFSPTSPAY 60
Query: 335 SPSS 324
S SS
Sbjct: 61 SISS 64
[238][TOP]
>UniRef100_UPI0000DD9478 Os08g0268000 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000DD9478
Length = 270
Score = 65.1 bits (157), Expect = 3e-09
Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 33/149 (22%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPT---------YSPSSPYNSGVSPDYSPS 387
+P+ P SP+Y+P++P SP Y+PS+PT Y+PS+P SPDY+PS
Sbjct: 107 TPTPPRRAASPDYTPSTPPPRAASPDYTPSTPTPPRRAASPNYTPSTPQRHAASPDYTPS 166
Query: 386 SP---------QFSPST--------GYSP-------SQPGYSPSSTSQYTPQTNDKDERG 279
+P ++PST Y+P + P YSP ST +P +D +
Sbjct: 167 TPTPPRRAASLDYTPSTPPPRAASPDYTPLSPPPRAASPEYSP-STPPPSPVPSDAESGT 225
Query: 278 KD*WRRSMRQFEARRSILRFCREGTLRCS 192
WRR R +R R ++ CS
Sbjct: 226 SPLWRRRRRHHPYQR------RGSSIACS 248
Score = 60.1 bits (144), Expect = 1e-07
Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 27/104 (25%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPT---------YSPSSPY--NSGVSPDYSPS- 387
SP SP+Y+P++P SP Y+PS+PT Y+PS+P SPDY+PS
Sbjct: 64 SPRRAASPDYTPSTPPRRAASPDYTPSTPTTPRRAASPDYTPSTPTPPRRAASPDYTPST 123
Query: 386 ------SPQFSPSTGYSP---SQPGYSPS------STSQYTPQT 300
SP ++PST P + P Y+PS ++ YTP T
Sbjct: 124 PPPRAASPDYTPSTPTPPRRAASPNYTPSTPQRHAASPDYTPST 167
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 13/93 (13%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPT---------SPSYSPTSPSYSPSSPTYSPSSPY--NSGVSPDYS 393
+P++P SP+Y+P+ SP Y+P++P +SP Y+PS+P SP+Y+
Sbjct: 91 TPTTPRRAASPDYTPSTPTPPRRAASPDYTPSTPPPRAASPDYTPSTPTPPRRAASPNYT 150
Query: 392 PSSPQ-FSPSTGYSPSQPGYSPSSTS-QYTPQT 300
PS+PQ + S Y+PS P + S YTP T
Sbjct: 151 PSTPQRHAASPDYTPSTPTPPRRAASLDYTPST 183
[239][TOP]
>UniRef100_B8BEN2 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8BEN2_ORYSI
Length = 519
Score = 65.1 bits (157), Expect = 3e-09
Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-TGYS 354
+PY P+ P P+ PSY P+ PSY PS P Y+P P + P PS P++SP Y
Sbjct: 290 TPY-PSPPEIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYV 348
Query: 353 PSQPGYSPSSTSQYTP 306
PS P Y+P S Y P
Sbjct: 349 PSPPQYAPQPPS-YVP 363
Score = 65.1 bits (157), Expect = 3e-09
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS-T 363
PS P P+ P+Y P+ PSY P+ P Y+P P Y+P P P+YSP P + PS
Sbjct: 293 PSPPEIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPP 352
Query: 362 GYSPSQPGYSPS 327
Y+P P Y PS
Sbjct: 353 QYAPQPPSYVPS 364
Score = 63.9 bits (154), Expect = 7e-09
Identities = 33/80 (41%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
PS P Y P+ P Y+P P Y+P P PS P YSP P P Y+P P + PS
Sbjct: 307 PSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPP 366
Query: 359 -YSPSQPGYSPSSTSQYTPQ 303
Y+P PG +P S +Y P+
Sbjct: 367 VYAPYPPGITP-SPPEYAPE 385
Score = 58.9 bits (141), Expect = 2e-07
Identities = 35/82 (42%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSP--TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 366
PS P +P+ P +P + P P+ PSY PS P+Y PS P + P Y+P P PS
Sbjct: 277 PSPPEVTPSPPEITPYPSPPEIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPS 336
Query: 365 -TGYSPSQPGYSPSSTSQYTPQ 303
YSP P Y P S QY PQ
Sbjct: 337 PPEYSPEPPSYVP-SPPQYAPQ 357
Score = 58.2 bits (139), Expect = 4e-07
Identities = 31/80 (38%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = -2
Query: 539 SPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS- 366
+P P Y+P P P+ P YSP PSY PS P Y+P P P Y+P P +PS
Sbjct: 320 APEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPVYAPYPPGITPSP 379
Query: 365 TGYSPSQPGYSPSSTSQYTP 306
Y+P P P Y P
Sbjct: 380 PEYAPEPPPGPPGGGGGYLP 399
[240][TOP]
>UniRef100_A9U3I4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9U3I4_PHYPA
Length = 291
Score = 65.1 bits (157), Expect = 3e-09
Identities = 46/90 (51%), Positives = 56/90 (62%), Gaps = 8/90 (8%)
Frame = -2
Query: 539 SPSSPYSPT--SPNYSPTSPSYSPTSPSY-SPSSPTYS--PSSPYNSGVSPDYSP--SSP 381
SP++P SPT SP YSP S SPT+PS SPSSPTYS P SP SG SP SP SSP
Sbjct: 120 SPTTPSSPTYSSPPYSPAPSSPSPTAPSGPSPSSPTYSSPPYSPTPSGSSPS-SPTYSSP 178
Query: 380 QFSPS-TGYSPSQPGYSPSSTSQYTPQTND 294
+SP+ + SP+ P S+ Y+P +D
Sbjct: 179 PYSPTPSSSSPTTPSSPSYSSPPYSPTPSD 208
Score = 64.3 bits (155), Expect = 5e-09
Identities = 45/80 (56%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPT----SPSYSPSSPTYS--PSSPYNSGVSPDYSPSSPQ 378
S SSP +P+SP+YS SP YSPT SPS +PSSPTYS P SP SG SP +PSSP
Sbjct: 185 SSSSPTTPSSPSYS--SPPYSPTPSDPSPS-TPSSPTYSSPPYSPTPSGPSPP-TPSSPT 240
Query: 377 FSPSTGYSPSQPGYSPSSTS 318
+S S YSP+ G SP++ S
Sbjct: 241 YS-SPPYSPTPSGSSPTTPS 259
Score = 63.5 bits (153), Expect = 9e-09
Identities = 45/84 (53%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYS--PTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
S PYSPT SP+SP+YS P SP+ S SSPT +PSSP S SP YSP+ SPST
Sbjct: 158 SPPYSPTPSGSSPSSPTYSSPPYSPTPSSSSPT-TPSSPSYS--SPPYSPTPSDPSPSTP 214
Query: 359 YSP--SQPGYSP--SSTSQYTPQT 300
SP S P YSP S S TP +
Sbjct: 215 SSPTYSSPPYSPTPSGPSPPTPSS 238
Score = 62.0 bits (149), Expect = 3e-08
Identities = 43/86 (50%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYS--PSSPTYSPSSPYN----SGVSPDYSPSSPQ 378
SPSSP + +SP YSPT SP+SP+YS P SPT S SSP S SP YSP+
Sbjct: 150 SPSSP-TYSSPPYSPTPSGSSPSSPTYSSPPYSPTPSSSSPTTPSSPSYSSPPYSPTPSD 208
Query: 377 FSPSTGYSP--SQPGYSPSSTSQYTP 306
SPST SP S P YSP+ + P
Sbjct: 209 PSPSTPSSPTYSSPPYSPTPSGPSPP 234
Score = 61.6 bits (148), Expect = 3e-08
Identities = 48/100 (48%), Positives = 54/100 (54%), Gaps = 20/100 (20%)
Frame = -2
Query: 539 SPSSPYSPTSPN-----YSPTSPSYSPTSPS-YSPSSPTYS--PSSPYNSGVSPD----- 399
S SSP +P+SP YSP S SPT+PS SPSSPTYS P SP SG SP
Sbjct: 117 SSSSPTTPSSPTYSSPPYSPAPSSPSPTAPSGPSPSSPTYSSPPYSPTPSGSSPSSPTYS 176
Query: 398 ---YSPSSPQFSPSTGYSP--SQPGYS--PSSTSQYTPQT 300
YSP+ SP+T SP S P YS PS S TP +
Sbjct: 177 SPPYSPTPSSSSPTTPSSPSYSSPPYSPTPSDPSPSTPSS 216
Score = 60.8 bits (146), Expect = 6e-08
Identities = 43/78 (55%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Frame = -2
Query: 539 SPSSPYSPT--SPNYSPTSPSYSPTSPSYSPSSPTYS--PSSPYNSGVSPDYSPSSPQFS 372
SPS+P SPT SP YSPT SP +PSSPTYS P SP SG SP +PSSP +S
Sbjct: 210 SPSTPSSPTYSSPPYSPTPSGPSPP----TPSSPTYSSPPYSPTPSGSSPT-TPSSPSYS 264
Query: 371 PSTGYSPSQPGYSPSSTS 318
S YSP+ G SPS S
Sbjct: 265 -SPPYSPTPSGGSPSGGS 281
Score = 60.1 bits (144), Expect = 1e-07
Identities = 44/89 (49%), Positives = 52/89 (58%), Gaps = 11/89 (12%)
Frame = -2
Query: 539 SPSSPY--SPTSPNYSPTSPSYSPTSPSYSP---SSPTYS--PSSPYNSGVSPDY----S 393
SP +P SP +P+ S +SP YSPT S SP SSPTYS P SP S SP S
Sbjct: 91 SPGTPSGGSPVTPSPSYSSPPYSPTPSSSSPTTPSSPTYSSPPYSPAPSSPSPTAPSGPS 150
Query: 392 PSSPQFSPSTGYSPSQPGYSPSSTSQYTP 306
PSSP +S S YSP+ G SPSS + +P
Sbjct: 151 PSSPTYS-SPPYSPTPSGSSPSSPTYSSP 178
Score = 54.7 bits (130), Expect = 4e-06
Identities = 44/100 (44%), Positives = 52/100 (52%), Gaps = 22/100 (22%)
Frame = -2
Query: 539 SPSSPYSPT----SPNYSPTSPSY-SPTSPSYSPSSPTYSP---SSPYNSGVSPDYS--- 393
S SP +PT SP YSP +PS SP +PS S SSP YSP SS + SP YS
Sbjct: 74 SDPSPVTPTPVYSSPPYSPGTPSGGSPVTPSPSYSSPPYSPTPSSSSPTTPSSPTYSSPP 133
Query: 392 ----PSSPQFSPSTGYSPSQPGYS-------PSSTSQYTP 306
PSSP + +G SPS P YS PS +S +P
Sbjct: 134 YSPAPSSPSPTAPSGPSPSSPTYSSPPYSPTPSGSSPSSP 173
Score = 54.3 bits (129), Expect = 5e-06
Identities = 41/78 (52%), Positives = 47/78 (60%), Gaps = 9/78 (11%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPT--SPSYSP-----SSPTYSPSSPYNSGVSPDYSPSSPQF 375
S PYSPT + SP++PS SPT SP YSP S PT PSSP S SP YSP+
Sbjct: 199 SPPYSPTPSDPSPSTPS-SPTYSSPPYSPTPSGPSPPT--PSSPTYS--SPPYSPTPSGS 253
Query: 374 SPSTGYSP--SQPGYSPS 327
SP+T SP S P YSP+
Sbjct: 254 SPTTPSSPSYSSPPYSPT 271
[241][TOP]
>UniRef100_Q1WKU4 Putative RNA polymerase II 215 kD subunit (Fragment) n=1
Tax=Drosophila erecta RepID=Q1WKU4_DROER
Length = 760
Score = 65.1 bits (157), Expect = 3e-09
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 16/85 (18%)
Frame = -2
Query: 530 SPYSPTSPNYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGVSPDYSPSSP 381
S +P P++SP+ SPS+SP P SPSSP + SP P + VSP YSP+SP
Sbjct: 667 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSP 726
Query: 380 QFSPST------GYSPSQPGYSPSS 324
++ S+ YSPS P YSP+S
Sbjct: 727 NYTASSPGGASPNYSPSSPNYSPTS 751
Score = 63.9 bits (154), Expect = 7e-09
Identities = 37/67 (55%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SPSSP SP Y P SPS SPSYSP+SP Y+ SSP G SP+YSPSSP +SP++
Sbjct: 699 SPSSPGPSMSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSP 752
Query: 359 -YSPSQP 342
Y+ + P
Sbjct: 753 LYASASP 759
Score = 56.6 bits (135), Expect = 1e-06
Identities = 31/56 (55%), Positives = 37/56 (66%), Gaps = 5/56 (8%)
Frame = -2
Query: 530 SPYSPTSPNYSPTSPSYSPTSPSYSPSSP-----TYSPSSPYNSGVSPDYSPSSPQ 378
SPY P SP+ SPSYSPTSP+Y+ SSP YSPSSP S SP Y+ +SP+
Sbjct: 708 SPYFPASPS---VSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPR 760
[242][TOP]
>UniRef100_UPI0001796FA8 PREDICTED: zinc finger protein 768 n=1 Tax=Equus caballus
RepID=UPI0001796FA8
Length = 547
Score = 64.7 bits (156), Expect = 4e-09
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Frame = -2
Query: 536 PSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP-ST 363
P +P + SP + P SP + SP + P SP ++P S + SP++ P SP++ P S
Sbjct: 67 PQNPEFESQSPRFEPESPGFESHSPGFVPPSPEFAPRSSESDSQSPEFEPQSPRYEPQSP 126
Query: 362 GYSPSQPGYSPSSTSQ------YTPQTNDKDERGKD*WRRSMRQFEARRS 231
GY P PGY S+ Y PQ N E ++ +FEA+ S
Sbjct: 127 GYEPKSPGYESQSSRYESKSPGYEPQ-NPVFEPQNPEFKTQSPEFEAQSS 175
Score = 56.6 bits (135), Expect = 1e-06
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSP-------SSPTYSPSSPYNSGVSPDYSPSSP 381
S S + P SP + SP + P SP ++P SP + P SP SP Y P SP
Sbjct: 74 SQSPRFEPESPGFESHSPGFVPPSPEFAPRSSESDSQSPEFEPQSPRYEPQSPGYEPKSP 133
Query: 380 QF-SPSTGYSPSQPGYSPSSTSQYTPQTNDKDERGKD*WRRSMRQFEARRSIL 225
+ S S+ Y PGY P + + PQ + + + +S R E IL
Sbjct: 134 GYESQSSRYESKSPGYEPQN-PVFEPQNPEFKTQSPEFEAQSSRFQEGAEMIL 185
[243][TOP]
>UniRef100_C6F1F7 DNA-directed RNA polymerase n=1 Tax=Plasmodium gallinaceum
RepID=C6F1F7_PLAGA
Length = 2200
Score = 64.7 bits (156), Expect = 4e-09
Identities = 46/106 (43%), Positives = 53/106 (50%), Gaps = 30/106 (28%)
Frame = -2
Query: 533 SSPYSPTSPN-------YSPTSPS------------------YSPTSPSYSPSSPTYSPS 429
S YSPTSP+ YSPTSP YS TSP YSP SP YSP+
Sbjct: 2040 SPSYSPTSPSYNADNVYYSPTSPKNQMDDVKSNIKYNVMSPVYSVTSPKYSPMSPQYSPT 2099
Query: 428 SPY-NSGVSPDYSP---SSPQFSP-STGYSPSQPGYSPSSTSQYTP 306
SP N+ SP YSP +SP+FSP S YS S P Y ++ P
Sbjct: 2100 SPVANNPGSPHYSPYSITSPKFSPTSPAYSISSPVYDKNAVLNNQP 2145
Score = 62.8 bits (151), Expect = 2e-08
Identities = 40/86 (46%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGVSPDYSPSSPQFSPS 366
S YS TSP YSP SP YSPTSP + +P SP YSP +SP S SP YS SSP + +
Sbjct: 2079 SPVYSVTSPKYSPMSPQYSPTSPVANNPGSPHYSPYSITSPKFSPTSPAYSISSPVYDKN 2138
Query: 365 T--GYSPSQPGYSPSSTSQYTPQTND 294
P P Y S Q T D
Sbjct: 2139 AVLNNQPLSPAYIIQSPVQVKQNTQD 2164
[244][TOP]
>UniRef100_C3XUY7 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3XUY7_BRAFL
Length = 1576
Score = 64.7 bits (156), Expect = 4e-09
Identities = 32/78 (41%), Positives = 33/78 (42%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
P PY P P Y P P Y P P Y P P Y P P P Y P P + P GY
Sbjct: 1477 PDQPYPPDQP-YPPPQPGYPPQQPGYPPQ-PGYPPQQPGYPPQQPGYPPQQPGYPPQPGY 1534
Query: 356 SPSQPGYSPSSTSQYTPQ 303
P QP Y P Y PQ
Sbjct: 1535 PPQQPAYPPQQPG-YPPQ 1551
[245][TOP]
>UniRef100_C6F096 RNA polymerase II (Fragment) n=1 Tax=Plasmodium yoelii nigeriensis
RepID=C6F096_9APIC
Length = 161
Score = 64.3 bits (155), Expect = 5e-09
Identities = 45/95 (47%), Positives = 49/95 (51%), Gaps = 32/95 (33%)
Frame = -2
Query: 524 YSPTSPN--------YSPTSPS-------------------YSPTSPSYSPSSPTYSPSS 426
YSPTSP YSPTSP YS TSP YSP+SP YSPSS
Sbjct: 1 YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSS 60
Query: 425 PY-NSGVSPDYSP---SSPQFSP-STGYSPSQPGY 336
P N+ SP YSP +SP+FSP S YS S P Y
Sbjct: 61 PVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 95
Score = 64.3 bits (155), Expect = 5e-09
Identities = 40/80 (50%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGVSPDYSPSSPQFSPS 366
S YS TSP YSPTSP YSP+SP +PSSP YSP +SP S SP YS SSP + +
Sbjct: 39 SPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKT 98
Query: 365 ---TGYSPSQPGYSPSSTSQ 315
G +P P Y S Q
Sbjct: 99 ENMAGKNPLSPAYMLQSRVQ 118
[246][TOP]
>UniRef100_Q0UCC9 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
RepID=Q0UCC9_PHANO
Length = 351
Score = 64.3 bits (155), Expect = 5e-09
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 18/83 (21%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSYS----PTSPSYSPSSPT------YSPSSPYNSGVSPDYSPSS 384
S YSP +P+++P SPSY+ PT+P+Y P++PT YSP+ P SP Y+P S
Sbjct: 138 SPRYSPPTPHFAPRSPSYAPGLPPTTPTYRPTTPTFIDLTYYSPTPPILMPESPTYTPPS 197
Query: 383 PQFSP--------STGYSPSQPG 339
P++ P S GY+P+ PG
Sbjct: 198 PRYYPASFEINLLSPGYAPTSPG 220
Score = 60.8 bits (146), Expect = 6e-08
Identities = 38/90 (42%), Positives = 50/90 (55%), Gaps = 14/90 (15%)
Frame = -2
Query: 533 SSPYSPTSPNYSPTSPSY-SP---------TSPSYSPSSPTYSPSSP-YNSGV---SPDY 396
+S Y+P SP YSP +P SP TSP YSP +P ++P SP Y G+ +P Y
Sbjct: 107 TSTYTPASPRYSPATPKIRSPRLTMLEDGATSPRYSPPTPHFAPRSPSYAPGLPPTTPTY 166
Query: 395 SPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 306
P++P F T YSP+ P P S + YTP
Sbjct: 167 RPTTPTFIDLTYYSPTPPILMPESPT-YTP 195
Score = 58.5 bits (140), Expect = 3e-07
Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 13/90 (14%)
Frame = -2
Query: 536 PSSP-YSPTSPN------YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQ 378
P++P Y PT+P YSPT P P SP+Y+P SP Y P+S + +SP Y+P+SP
Sbjct: 161 PTTPTYRPTTPTFIDLTYYSPTPPILMPESPTYTPPSPRYYPASFEINLLSPGYAPTSPG 220
Query: 377 FSPSTGYSPSQPGYSPSSTS------QYTP 306
T +PS P P+S+S YTP
Sbjct: 221 IRSPTYGAPS-PDLEPASSSLSLTSPTYTP 249
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 18/88 (20%)
Frame = -2
Query: 515 TSPNYSPTSPSYSPTSPSYS----PSSPTYSPSSP------YNSGVSPDYSPSSPQFS-P 369
TSP YSP +P ++P SPSY+ P++PTY P++P Y S P P SP ++ P
Sbjct: 137 TSPRYSPPTPHFAPRSPSYAPGLPPTTPTYRPTTPTFIDLTYYSPTPPILMPESPTYTPP 196
Query: 368 STGYSPS-------QPGYSPSSTSQYTP 306
S Y P+ PGY+P+S +P
Sbjct: 197 SPRYYPASFEINLLSPGYAPTSPGIRSP 224
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 14/84 (16%)
Frame = -2
Query: 533 SSPYSPTSPN-----YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
S Y+PTSP Y SP P S S S +SPTY+P+SP+ + S Y +SP F
Sbjct: 211 SPGYAPTSPGIRSPTYGAPSPDLEPASSSLSLTSPTYTPTSPHFTPTSTPYVRTSPSFYR 270
Query: 368 STG---------YSPSQPGYSPSS 324
+G Y P+ P YSP+S
Sbjct: 271 PSGSRSPSFYRPYGPASPTYSPTS 294
Score = 56.2 bits (134), Expect = 1e-06
Identities = 41/122 (33%), Positives = 55/122 (45%), Gaps = 20/122 (16%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSG------------VS 405
+PS P S + S TSP+Y+PTSP ++P+S Y SPS SG S
Sbjct: 228 APSPDLEPASSSLSLTSPTYTPTSPHFTPTSTPYVRTSPSFYRPSGSRSPSFYRPYGPAS 287
Query: 404 PDYSPSSPQFSPSTGYSP-----SQPGYSPSSTSQYTPQTNDKDERGKD*WRRSMRQFEA 240
P YSP+SP S G P P YSP S S+ ++ + RR + E+
Sbjct: 288 PTYSPTSPVIPTSIGSPPINFTLGSPTYSPPSPSRLPSARIQENRLFRRRQRREEHEMES 347
Query: 239 RR 234
R
Sbjct: 348 HR 349
Score = 53.9 bits (128), Expect = 7e-06
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Frame = -2
Query: 533 SSPY---SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP----------YNSGVSPDYS 393
S+P+ +P P SP PT+ +Y+P+SP YSP++P + SP YS
Sbjct: 83 SAPFFGVTPVRRYLDPISPGLRPTTSTYTPASPRYSPATPKIRSPRLTMLEDGATSPRYS 142
Query: 392 PSSPQFSPSTGYSPSQPGYSPSSTSQYTPQT 300
P +P F+P SPS P +T Y P T
Sbjct: 143 PPTPHFAPR---SPSYAPGLPPTTPTYRPTT 170
[247][TOP]
>UniRef100_UPI000179248D PREDICTED: similar to RR2 cuticle protein 3 n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179248D
Length = 299
Score = 63.9 bits (154), Expect = 7e-09
Identities = 36/78 (46%), Positives = 54/78 (69%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SPSSP +P++P+ +P++PSYSP +PSYSP+ P YSP+ Y+ +P Y P+ P +SP+
Sbjct: 29 SPSSPSAPSAPS-APSAPSYSP-APSYSPA-PLYSPAPSYSP--APAYKPA-PSYSPAPS 82
Query: 359 YSPSQPGYSPSSTSQYTP 306
YSP+ P Y P+ + P
Sbjct: 83 YSPA-PAYKPAPAYKPAP 99
Score = 60.8 bits (146), Expect = 6e-08
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVS----PDYSPS----- 387
+PS+P +P++P+YSP +PSYSP +P YSP+ P+YSP+ Y S P YSP+
Sbjct: 35 APSAPSAPSAPSYSP-APSYSP-APLYSPA-PSYSPAPAYKPAPSYSPAPSYSPAPAYKP 91
Query: 386 SPQFSPSTGYSPSQPGYSPSSTS 318
+P + P+ Y PS P YS S S
Sbjct: 92 APAYKPAPSYKPS-PSYSAPSYS 113
Score = 60.5 bits (145), Expect = 8e-08
Identities = 36/81 (44%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Frame = -2
Query: 539 SPSSPY---SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SPS+P +P++P+YSP +PSYSP +P YSP +P+YSP+ Y +P YSP +P +SP
Sbjct: 32 SPSAPSAPSAPSAPSYSP-APSYSP-APLYSP-APSYSPAPAYKP--APSYSP-APSYSP 85
Query: 368 STGYSPSQPGYSPSSTSQYTP 306
+ Y P+ P Y P+ + + +P
Sbjct: 86 APAYKPA-PAYKPAPSYKPSP 105
Score = 57.0 bits (136), Expect = 8e-07
Identities = 35/77 (45%), Positives = 54/77 (70%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
PS P SP+SP+ +P++PS +P++PSYSP +P+YSP+ Y+ +P YSP +P + P+ Y
Sbjct: 25 PSYP-SPSSPS-APSAPS-APSAPSYSP-APSYSPAPLYSP--APSYSP-APAYKPAPSY 77
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+ + P
Sbjct: 78 SPA-PSYSPAPAYKPAP 93
[248][TOP]
>UniRef100_UPI00016E658E UPI00016E658E related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E658E
Length = 1628
Score = 63.9 bits (154), Expect = 7e-09
Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 6/54 (11%)
Frame = -2
Query: 536 PSSPYSPT-----SPNYSPTSPSYSPTSPS-YSPSSPTYSPSSPYNSGVSPDYS 393
P+SPY P+ SPNYSPTSP+Y P SP Y+P SP YSP+SP S SP YS
Sbjct: 1575 PASPYIPSPGGAMSPNYSPTSPAYEPRSPGGYTPQSPGYSPTSPSYSPTSPSYS 1628
Score = 57.0 bits (136), Expect = 8e-07
Identities = 38/87 (43%), Positives = 48/87 (55%), Gaps = 13/87 (14%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGVSPDYSPSSPQFS 372
S +S S SP YSP ++SPT S P SP P+SPY +SP+YSP+SP +
Sbjct: 1547 SAASDASGFSPGYSP---AWSPTPGS--PGSP--GPASPYIPSPGGAMSPNYSPTSPAYE 1599
Query: 371 P---------STGYSPSQPGYSPSSTS 318
P S GYSP+ P YSP+S S
Sbjct: 1600 PRSPGGYTPQSPGYSPTSPSYSPTSPS 1626
Score = 53.9 bits (128), Expect = 7e-06
Identities = 26/37 (70%), Positives = 30/37 (81%), Gaps = 2/37 (5%)
Frame = -2
Query: 539 SPSSP-YSPTSPN-YSPTSPSYSPTSPSYSPSSPTYS 435
SP+SP Y P SP Y+P SP YSPTSPSYSP+SP+YS
Sbjct: 1592 SPTSPAYEPRSPGGYTPQSPGYSPTSPSYSPTSPSYS 1628
[249][TOP]
>UniRef100_Q4DE19 Putative uncharacterized protein n=1 Tax=Trypanosoma cruzi
RepID=Q4DE19_TRYCR
Length = 292
Score = 63.9 bits (154), Expect = 7e-09
Identities = 28/75 (37%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = -2
Query: 524 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF-SPSTGYSPS 348
Y P P Y P P Y P P Y P P Y P P Y P + +P GY P
Sbjct: 12 YGPPQPGYGPPQPGYGPPQPGYGPPQPGYGSPQPGYGAPQPGYGAPQPGYGAPQPGYGPP 71
Query: 347 QPGYSPSSTSQYTPQ 303
QPGY P PQ
Sbjct: 72 QPGYGPPQPGYGAPQ 86
Score = 58.5 bits (140), Expect = 3e-07
Identities = 27/79 (34%), Positives = 28/79 (35%), Gaps = 1/79 (1%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFS-PSTG 360
P Y P P Y P P Y P P Y P Y P P Y P + P G
Sbjct: 15 PQPGYGPPQPGYGPPQPGYGPPQPGYGSPQPGYGAPQPGYGAPQPGYGAPQPGYGPPQPG 74
Query: 359 YSPSQPGYSPSSTSQYTPQ 303
Y P QPGY PQ
Sbjct: 75 YGPPQPGYGAPQPGYGPPQ 93
Score = 57.0 bits (136), Expect = 8e-07
Identities = 27/88 (30%), Positives = 31/88 (35%), Gaps = 8/88 (9%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQF------ 375
P Y P P Y P P Y P Y P Y P P Y P P +
Sbjct: 22 PQPGYGPPQPGYGPPQPGYGSPQPGYGAPQPGYGAPQPGYGAPQPGYGPPQPGYGPPQPG 81
Query: 374 --SPSTGYSPSQPGYSPSSTSQYTPQTN 297
+P GY P QP Y ++ P TN
Sbjct: 82 YGAPQPGYGPPQPEYGKPASGNALPYTN 109
[250][TOP]
>UniRef100_C4WTF5 ACYPI006712 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WTF5_ACYPI
Length = 304
Score = 63.9 bits (154), Expect = 7e-09
Identities = 36/78 (46%), Positives = 54/78 (69%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTG 360
SPSSP +P++P+ +P++PSYSP +PSYSP+ P YSP+ Y+ +P Y P+ P +SP+
Sbjct: 29 SPSSPSAPSAPS-APSAPSYSP-APSYSPA-PLYSPAPSYSP--APAYKPA-PSYSPAPS 82
Query: 359 YSPSQPGYSPSSTSQYTP 306
YSP+ P Y P+ + P
Sbjct: 83 YSPA-PAYKPAPAYKPAP 99
Score = 60.8 bits (146), Expect = 6e-08
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Frame = -2
Query: 539 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVS----PDYSPS----- 387
+PS+P +P++P+YSP +PSYSP +P YSP+ P+YSP+ Y S P YSP+
Sbjct: 35 APSAPSAPSAPSYSP-APSYSP-APLYSPA-PSYSPAPAYKPAPSYSPAPSYSPAPAYKP 91
Query: 386 SPQFSPSTGYSPSQPGYSPSSTS 318
+P + P+ Y PS P YS S S
Sbjct: 92 APAYKPAPSYKPS-PSYSAPSYS 113
Score = 60.5 bits (145), Expect = 8e-08
Identities = 36/81 (44%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Frame = -2
Query: 539 SPSSPY---SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 369
SPS+P +P++P+YSP +PSYSP +P YSP +P+YSP+ Y +P YSP +P +SP
Sbjct: 32 SPSAPSAPSAPSAPSYSP-APSYSP-APLYSP-APSYSPAPAYKP--APSYSP-APSYSP 85
Query: 368 STGYSPSQPGYSPSSTSQYTP 306
+ Y P+ P Y P+ + + +P
Sbjct: 86 APAYKPA-PAYKPAPSYKPSP 105
Score = 57.0 bits (136), Expect = 8e-07
Identities = 35/77 (45%), Positives = 54/77 (70%)
Frame = -2
Query: 536 PSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGY 357
PS P SP+SP+ +P++PS +P++PSYSP +P+YSP+ Y+ +P YSP +P + P+ Y
Sbjct: 25 PSYP-SPSSPS-APSAPS-APSAPSYSP-APSYSPAPLYSP--APSYSP-APAYKPAPSY 77
Query: 356 SPSQPGYSPSSTSQYTP 306
SP+ P YSP+ + P
Sbjct: 78 SPA-PSYSPAPAYKPAP 93