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[1][TOP]
>UniRef100_Q9BBS7 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Lotus japonicus
RepID=RPOC2_LOTJA
Length = 1332
Score = 388 bits (997), Expect = e-106
Identities = 193/193 (100%), Positives = 193/193 (100%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVRLCPDHCHFMHPTISPDTSNLLAKKRRNR 401
SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVRLCPDHCHFMHPTISPDTSNLLAKKRRNR
Sbjct: 490 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVRLCPDHCHFMHPTISPDTSNLLAKKRRNR 549
Query: 400 FIIPFLFRSIRERNNELMPDISVEIPIDGIIHKNSILAYFDDPQYRTQSSGIAKYKTIGI 221
FIIPFLFRSIRERNNELMPDISVEIPIDGIIHKNSILAYFDDPQYRTQSSGIAKYKTIGI
Sbjct: 550 FIIPFLFRSIRERNNELMPDISVEIPIDGIIHKNSILAYFDDPQYRTQSSGIAKYKTIGI 609
Query: 220 HSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEVHILSESSSIMVRNNSIIGVNTPIT 41
HSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEVHILSESSSIMVRNNSIIGVNTPIT
Sbjct: 610 HSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEVHILSESSSIMVRNNSIIGVNTPIT 669
Query: 40 LNKKSRVGGLVRV 2
LNKKSRVGGLVRV
Sbjct: 670 LNKKSRVGGLVRV 682
[2][TOP]
>UniRef100_UPI00017E10C5 RNA polymerase beta'''' subunit n=1 Tax=Medicago truncatula
RepID=UPI00017E10C5
Length = 1374
Score = 264 bits (674), Expect = 4e-69
Identities = 137/219 (62%), Positives = 162/219 (73%), Gaps = 27/219 (12%)
Frame = -2
Query: 577 LLKDQDQMSTHSLPTAKRNTSNFLVSNNQVRL-------------------------CPD 473
L KDQDQ++ SL T KRN SN LVSN++V+L C D
Sbjct: 495 LRKDQDQINIDSLSTGKRNISNLLVSNDEVKLKLLSLKTFGTKEKGISNYSILNQMICTD 554
Query: 472 HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHKN 299
H H M+P I DT LLAK+RRNRF+IPF +SI+ER NELM +S+EIPI+GI H+N
Sbjct: 555 HSHLMYPAIFHDTFYLLAKRRRNRFLIPF--QSIQERKNELMRPFGVSIEIPINGIFHRN 612
Query: 298 SILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQ 119
SI AYFDDPQYR Q+SGI KY+T+GIHS+FQKED IEYRGI+E KPKYQIKVDRFFFIP+
Sbjct: 613 SIFAYFDDPQYRRQNSGITKYRTVGIHSVFQKEDFIEYRGIKELKPKYQIKVDRFFFIPE 672
Query: 118 EVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
EVHIL ESSSIMVRNNS++G+ TPIT N +SRVGGLVR+
Sbjct: 673 EVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGLVRL 711
[3][TOP]
>UniRef100_A1XK46 RNA polymerase beta chain (Fragment) n=1 Tax=Cercis canadensis
RepID=A1XK46_CERCN
Length = 864
Score = 255 bits (652), Expect = 2e-66
Identities = 138/220 (62%), Positives = 161/220 (73%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL R SN LVSN+QVR +C
Sbjct: 43 SLHKDQDQMNIHSLSAGGRYISNLLVSNDQVRHKFFSSNSSGKKERRIPDYSGLNRIICM 102
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
C+F++ I D S+LLAK+RRNRFIIPF +SI ER EL+P IS+EIPI+GI +
Sbjct: 103 GRCNFIYAAILHDNSDLLAKRRRNRFIIPF--QSIPEREKELIPPSGISIEIPINGIFRR 160
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDPQYR +SSGI KY+TIG+HSI + EDLIEYRG++EFKPKYQ+KVDRFFFIP
Sbjct: 161 NSILAYFDDPQYRKKSSGITKYRTIGVHSIVKNEDLIEYRGVKEFKPKYQMKVDRFFFIP 220
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL ESSSIMVRNNSIIGV+TPIT N +SRVGGLVRV
Sbjct: 221 EEVHILPESSSIMVRNNSIIGVDTPITFNIRSRVGGLVRV 260
[4][TOP]
>UniRef100_Q8HVY3 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Glycine max
RepID=RPOC2_SOYBN
Length = 1386
Score = 251 bits (642), Expect = 2e-65
Identities = 136/221 (61%), Positives = 163/221 (73%), Gaps = 28/221 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
S+ KDQDQM+ H L T +R+ N L S +VR +
Sbjct: 490 SIRKDQDQMNIHYLSTGERDFCNLLASKKKVRHKLFRFNPSDKKERRISDYSIFNQIISI 549
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELM--PDISVEIPIDGIIHK 302
DHCHF HPTI DT++LLAK+RRNR IIPF F+SI+ER+ ELM IS+EIPI+GI +
Sbjct: 550 DHCHFTHPTIFHDTTDLLAKRRRNRLIIPFQFQSIQERDKELMLASSISIEIPINGIFRR 609
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKED-LIEYRGIREFKPKYQIKVDRFFFI 125
NSILAYFDDPQYRTQSSGI KY+TIGI+SIF+KED LIEY+G++EFK KYQIKVD+FFFI
Sbjct: 610 NSILAYFDDPQYRTQSSGITKYRTIGINSIFKKEDFLIEYQGVKEFKTKYQIKVDQFFFI 669
Query: 124 PQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
P+EVHIL ESSSIMVRNNSI+ V+T ITLN +SRV GLVR+
Sbjct: 670 PEEVHILPESSSIMVRNNSIVEVDTLITLNIRSRVRGLVRL 710
[5][TOP]
>UniRef100_A9XW63 DNA-directed RNA polymerase (Fragment) n=1 Tax=Connarus conchocarpus
RepID=A9XW63_9ROSI
Length = 1277
Score = 247 bits (631), Expect = 4e-64
Identities = 133/220 (60%), Positives = 159/220 (72%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R S V+N+QVR +C
Sbjct: 463 SLPKDQDQMNLHSLSVERRCISILSVNNDQVRHKFFSSDLSGKKESTIPHYSELNRVICT 522
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
HC+ + P I + S+L+AK+RRN+FIIPF +SI+ER ELMP DIS+EIPI GI +
Sbjct: 523 GHCNLIDPAILHENSDLVAKRRRNKFIIPF--QSIQEREKELMPRSDISIEIPISGIFRR 580
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSI AYFDDPQYR +SSGI KY TIG+HSI +KEDLIEYRG++EFKPKYQIKVDRFFFIP
Sbjct: 581 NSIFAYFDDPQYRRKSSGITKYGTIGVHSIVKKEDLIEYRGVKEFKPKYQIKVDRFFFIP 640
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EV+I ESSSIMVRNNSIIGV+T ITLN ++RVGGLVRV
Sbjct: 641 EEVYIFPESSSIMVRNNSIIGVDTRITLNTRNRVGGLVRV 680
[6][TOP]
>UniRef100_A9XWB0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Quillaja saponaria
RepID=A9XWB0_9FABA
Length = 1313
Score = 246 bits (628), Expect = 9e-64
Identities = 134/220 (60%), Positives = 160/220 (72%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL R+ SN V+N+QVR LC
Sbjct: 458 SLHKDQDQMNIHSLSAGGRSISNLSVNNDQVRHKFFSSNLSGKKEKRISDYSGLNRILCA 517
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
H +F++ I + S+LLAK+RRNRFIIPF +SI+ER+ E MP IS+EIPIDGI
Sbjct: 518 GHSNFLYSAILHENSDLLAKRRRNRFIIPF--QSIQERDKEQMPRSGISIEIPIDGIFRI 575
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDPQYR +SSGI KY+TIG+HSI +KEDLIEYRG++EFKPKYQ+KVD+FFFIP
Sbjct: 576 NSILAYFDDPQYRKKSSGITKYRTIGVHSILKKEDLIEYRGVKEFKPKYQMKVDQFFFIP 635
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL ESS IMVRNNSIIGV+T ITLN +S+V GLVRV
Sbjct: 636 EEVHILPESSFIMVRNNSIIGVDTSITLNIRSQVAGLVRV 675
[7][TOP]
>UniRef100_A9XWB9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Stylobasium
spathulatum RepID=A9XWB9_9FABA
Length = 1266
Score = 244 bits (624), Expect = 3e-63
Identities = 135/222 (60%), Positives = 162/222 (72%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL +DQDQM+ +SL R SN VSN+QVR +C
Sbjct: 460 SLHRDQDQMNINSLSAGGRYISNLSVSNDQVRPKFFSSNLSGKKESGILDYSGLNRIICL 519
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
HCHF++P I + S+LLAK+RRNRFIIPF +SI+E++ ELMP IS+EIPI+GI +
Sbjct: 520 GHCHFIYPDILHENSDLLAKRRRNRFIIPF--QSIQEQDKELMPGSGISMEIPINGIFRR 577
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDPQYR +S GI KY TIG HSI +KEDLIEYRG++EFK KYQ+KVD+FFFIP
Sbjct: 578 NSILAYFDDPQYRKKSLGITKYSTIGAHSILKKEDLIEYRGVKEFKLKYQMKVDQFFFIP 637
Query: 121 QEVHIL--SESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL S SSSIMVRNNS+IGV+TPITLN +SRVGGLVRV
Sbjct: 638 EEVHILPESSSSSIMVRNNSLIGVDTPITLNIRSRVGGLVRV 679
[8][TOP]
>UniRef100_A9XW42 DNA-directed RNA polymerase (Fragment) n=1 Tax=Albizia julibrissin
RepID=A9XW42_ALBJU
Length = 1321
Score = 244 bits (623), Expect = 4e-63
Identities = 132/223 (59%), Positives = 162/223 (72%), Gaps = 30/223 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR---------------------------L 482
SL KDQDQM+ HSL R SN +VSN+QV+ L
Sbjct: 460 SLHKDQDQMNIHSLSAGGRYISNLVVSNDQVQVRHKFFSSNPSDKKKSGIPDYSGLNRIL 519
Query: 481 CPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELM---PDISVEIPIDGI 311
C H + ++P I + S+LLAK+RRNR IIPF +SI+ER+ EL+ IS+EIP++GI
Sbjct: 520 CMGHFNLIYPAILHENSDLLAKRRRNRLIIPF--QSIQERDKELLMPPSGISIEIPLNGI 577
Query: 310 IHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFF 131
+NSILAYFDDPQYR +SSGI KY+TIG+HSIF+KEDLIEYRG++E KPKYQ+K+DRFF
Sbjct: 578 FCRNSILAYFDDPQYRKKSSGITKYRTIGVHSIFKKEDLIEYRGVKELKPKYQMKMDRFF 637
Query: 130 FIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
FIP+EVHIL ESSSIMVRNNSIIGV+TPIT+N +SRVGGLV V
Sbjct: 638 FIPEEVHILPESSSIMVRNNSIIGVDTPITVNIRSRVGGLVXV 680
[9][TOP]
>UniRef100_A9XW40 DNA-directed RNA polymerase n=1 Tax=Berberidopsis corallina
RepID=A9XW40_9MAGN
Length = 1389
Score = 244 bits (623), Expect = 4e-63
Identities = 134/220 (60%), Positives = 161/220 (73%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------LCPDH--------- 470
SL KDQDQM+ HSL +R SN V+N+QVR PD+
Sbjct: 494 SLHKDQDQMNVHSLSVERRYISNLSVTNDQVRHKFFSSYFSGKKEGRIPDYSELNRIIGT 553
Query: 469 --CHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
C+ ++P I + S+LLAK+R+NRFIIPF +SI+ER ELMP IS+EIPI+GI +
Sbjct: 554 SRCNLIYPAILYENSDLLAKRRKNRFIIPF--QSIQEREKELMPRSGISIEIPINGIFRR 611
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR +SSGI KY TI +HSI +KEDLIEYRG++EF+PKYQ+KVDRFFFIP
Sbjct: 612 NSILAYFDDPRYRRKSSGITKYGTIEVHSIVKKEDLIEYRGVKEFRPKYQMKVDRFFFIP 671
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSSIMVRNNSIIGVNT ITLN +SRVGGLVRV
Sbjct: 672 EEVHILPGSSSIMVRNNSIIGVNTQITLNTRSRVGGLVRV 711
[10][TOP]
>UniRef100_A6YAK7 RNA polymerase beta' subunit (Fragment) n=1 Tax=Hamamelis japonica
RepID=A6YAK7_HAMJA
Length = 860
Score = 244 bits (623), Expect = 4e-63
Identities = 134/222 (60%), Positives = 158/222 (71%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQMS HSL +R SN V+N+QVR +C
Sbjct: 42 SLHKDQDQMSVHSLSVERRYISNLSVTNDQVRHKFFSSDLSGKKEGRIPDYSELNRIICT 101
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD----ISVEIPIDGII 308
HC+ ++P I + S+LLAK+RRNRFIIPF + I+ER E MP IS+EIPI+GI
Sbjct: 102 GHCNPIYPAILRENSDLLAKRRRNRFIIPF--QPIQEREKEQMPHSDSGISIEIPINGIF 159
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+NSILAYFDDP+YR SSGI KY TI +HSI +KEDLIEYRG++EFKPKYQ+KVDRFFF
Sbjct: 160 RRNSILAYFDDPRYRRNSSGITKYGTIEVHSIVKKEDLIEYRGVKEFKPKYQMKVDRFFF 219
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHIL SSSIMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 220 IPEEVHILPGSSSIMVRNNSIIGVDTRITLNIRSRVGGLVRV 261
[11][TOP]
>UniRef100_A6YAK0 RNA polymerase beta' subunit (Fragment) n=1 Tax=Cercidiphyllum
japonicum RepID=A6YAK0_CERJA
Length = 798
Score = 244 bits (623), Expect = 4e-63
Identities = 133/222 (59%), Positives = 158/222 (71%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQMS HSL +R SN V+N+QVR +C
Sbjct: 42 SLHKDQDQMSVHSLSVERRYISNLSVTNDQVRHKLFSSDLSGKKEGGIPNYSELNRIICT 101
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD----ISVEIPIDGII 308
HC+ ++P I + S+LLAK+RRNRFIIPF +SI+ER E M IS+EIPI+GI
Sbjct: 102 GHCNLIYPAILRENSDLLAKRRRNRFIIPF--QSIQEREKEQMSHSDSGISIEIPINGIF 159
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+NSILAYFDDP+YR SSGI KY TI +HSI +KEDLIEYRG++EFKP+YQ+KVDRFFF
Sbjct: 160 RRNSILAYFDDPRYRRNSSGITKYGTIEVHSIVKKEDLIEYRGVKEFKPRYQMKVDRFFF 219
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHIL SSSIMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 220 IPEEVHILPGSSSIMVRNNSIIGVDTRITLNTRSRVGGLVRV 261
[12][TOP]
>UniRef100_A1XKF0 RNA polymerase beta chain (Fragment) n=1 Tax=Berberidopsis beckleri
RepID=A1XKF0_9MAGN
Length = 829
Score = 244 bits (623), Expect = 4e-63
Identities = 134/220 (60%), Positives = 161/220 (73%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------LCPDH--------- 470
SL KDQDQM+ HSL +R SN V+N+QVR PD+
Sbjct: 11 SLHKDQDQMNVHSLSVERRYISNLSVTNDQVRHKFFSSYFSGKKEGRIPDYSELNRIIGT 70
Query: 469 --CHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
C+ ++P I + S+LLAK+R+NRFIIPF +SI+ER ELMP IS+EIPI+GI +
Sbjct: 71 SRCNLIYPAILYENSDLLAKRRKNRFIIPF--QSIQEREKELMPRSGISIEIPINGIFRR 128
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR +SSGI KY TI +HSI +KEDLIEYRG++EF+PKYQ+KVDRFFFIP
Sbjct: 129 NSILAYFDDPRYRRKSSGITKYGTIEVHSIVKKEDLIEYRGVKEFRPKYQMKVDRFFFIP 188
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSSIMVRNNSIIGVNT ITLN +SRVGGLVRV
Sbjct: 189 EEVHILPGSSSIMVRNNSIIGVNTQITLNTRSRVGGLVRV 228
[13][TOP]
>UniRef100_A1XK98 RNA polymerase beta chain (Fragment) n=1 Tax=Hamamelis mollis
RepID=A1XK98_HAMMO
Length = 863
Score = 244 bits (623), Expect = 4e-63
Identities = 134/222 (60%), Positives = 158/222 (71%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQMS HSL +R SN V+N+QVR +C
Sbjct: 45 SLHKDQDQMSVHSLSVERRYISNLSVTNDQVRHKFFSSDLSGKKEGRIPDYSELNRIICT 104
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD----ISVEIPIDGII 308
HC+ ++P I + S+LLAK+RRNRFIIPF + I+ER E MP IS+EIPI+GI
Sbjct: 105 GHCNPIYPAILRENSDLLAKRRRNRFIIPF--QPIQEREKEQMPHSDSGISIEIPINGIF 162
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+NSILAYFDDP+YR SSGI KY TI +HSI +KEDLIEYRG++EFKPKYQ+KVDRFFF
Sbjct: 163 RRNSILAYFDDPRYRRNSSGITKYGTIEVHSIVKKEDLIEYRGVKEFKPKYQMKVDRFFF 222
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHIL SSSIMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 223 IPEEVHILPGSSSIMVRNNSIIGVDTRITLNIRSRVGGLVRV 264
[14][TOP]
>UniRef100_A1XK16 RNA polymerase beta chain (Fragment) n=1 Tax=Platanus occidentalis
RepID=A1XK16_PLAOC
Length = 863
Score = 244 bits (622), Expect = 5e-63
Identities = 132/220 (60%), Positives = 160/220 (72%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R SNF V+N+QVR +C
Sbjct: 45 SLHKDQDQMNVHSLSVERRYISNFSVTNDQVRHKLFNSYPSSKKGERILDYSGTDRIICN 104
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
HC+F++P+I + S+LLAK+RRNRFIIPF +S +ER ELM DIS+EIPI+GI +
Sbjct: 105 GHCNFIYPSILHENSDLLAKRRRNRFIIPF--QSNQEREKELMSRSDISIEIPINGIFRR 162
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR +SGI KY TI +H+I +KEDLIEYR +EF+PKYQ+KVDRFFFIP
Sbjct: 163 NSILAYFDDPRYRRNNSGITKYGTIEVHAIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIP 222
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSSIMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 223 EEVHILPGSSSIMVRNNSIIGVDTRITLNARSRVGGLVRV 262
[15][TOP]
>UniRef100_Q09G56 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Platanus
occidentalis RepID=RPOC2_PLAOC
Length = 1387
Score = 244 bits (622), Expect = 5e-63
Identities = 132/220 (60%), Positives = 160/220 (72%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R SNF V+N+QVR +C
Sbjct: 494 SLHKDQDQMNVHSLSVERRYISNFSVTNDQVRHKLFNSYPSSKKGERILDYSGTDRIICN 553
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
HC+F++P+I + S+LLAK+RRNRFIIPF +S +ER ELM DIS+EIPI+GI +
Sbjct: 554 GHCNFIYPSILHENSDLLAKRRRNRFIIPF--QSNQEREKELMSRSDISIEIPINGIFRR 611
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR +SGI KY TI +H+I +KEDLIEYR +EF+PKYQ+KVDRFFFIP
Sbjct: 612 NSILAYFDDPRYRRNNSGITKYGTIEVHAIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIP 671
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSSIMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 672 EEVHILPGSSSIMVRNNSIIGVDTRITLNARSRVGGLVRV 711
[16][TOP]
>UniRef100_A9XW88 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixonanthes icosandra x
Ixonanthes cuneata RepID=A9XW88_9ROSI
Length = 1262
Score = 243 bits (621), Expect = 6e-63
Identities = 131/220 (59%), Positives = 159/220 (72%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQMS SL +R S+ V+N+QV+ +C
Sbjct: 461 SLHKDQDQMSVRSLSVERRYISSPSVNNDQVKHKFLSSDLSGKKDSRIPDYSELNRIICT 520
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
HC+ ++P I + S+LLAK+RRNRFIIPF +SI+E+ ELMP DIS+EIPI+GI H+
Sbjct: 521 GHCNLIYPAILHENSDLLAKRRRNRFIIPF--QSIQEQEKELMPCSDISLEIPINGIFHR 578
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSI AYF DPQYR SSGI KY IG+HSI +KEDLIEYRG++EFKPKYQ+KVDRFFFIP
Sbjct: 579 NSIFAYFGDPQYRRNSSGITKYGAIGVHSIVKKEDLIEYRGVKEFKPKYQMKVDRFFFIP 638
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EV+IL E SS+MVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 639 EEVYILPEFSSLMVRNNSIIGVDTQITLNTRSRVGGLVRV 678
[17][TOP]
>UniRef100_A9XW80 DNA-directed RNA polymerase n=2 Tax=Heuchera RepID=A9XW80_HEUSA
Length = 1376
Score = 243 bits (619), Expect = 1e-62
Identities = 129/219 (58%), Positives = 160/219 (73%), Gaps = 26/219 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR----------------------LCPDHC 467
SL KDQDQ++ HSL ++ SNF V+N+QVR +C DHC
Sbjct: 494 SLHKDQDQLNVHSLSVERKYISNFSVTNDQVRHKLFSSDRSGKRIPDYSELNRIICTDHC 553
Query: 466 HFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD----ISVEIPIDGIIHKN 299
+F++P I + +LL+K+R+NR IIPF +SI+ER E MP IS+EIPI+GI KN
Sbjct: 554 NFIYPAILHENYDLLSKRRKNRLIIPF--QSIQEREKEQMPHSDSGISIEIPINGIFRKN 611
Query: 298 SILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQ 119
SI+AYFDDP+YR SSGI KY TI +HSI +KEDLIEYRG +EFKP+YQ++VDRFFFIP+
Sbjct: 612 SIMAYFDDPRYRRNSSGITKYGTIEVHSIVKKEDLIEYRGGKEFKPRYQMQVDRFFFIPE 671
Query: 118 EVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
EVHIL SSSIMVRNNSIIGV+T ITLNK+SRVGGLVR+
Sbjct: 672 EVHILPGSSSIMVRNNSIIGVSTRITLNKRSRVGGLVRM 710
[18][TOP]
>UniRef100_A6YAL4 RNA polymerase beta' subunit (Fragment) n=1 Tax=Penthorum sedoides
RepID=A6YAL4_9MAGN
Length = 842
Score = 243 bits (619), Expect = 1e-62
Identities = 132/222 (59%), Positives = 155/222 (69%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R SN V+N+Q R +C
Sbjct: 42 SLHKDQDQMNVHSLSVERRYISNLSVTNDQARDKICSSDLSGKKEGRIPDYSEFNRIICT 101
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD----ISVEIPIDGII 308
HC+ M PTI + S+LLAK+RRNRFIIPF +SI+ER E +P IS+EIPI+GI
Sbjct: 102 GHCNLMDPTILHENSDLLAKRRRNRFIIPF--QSIQEREKEQIPHLDSGISIEIPINGIF 159
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+NSILAYFDDPQYR SSGI KY TI +HSI +KED IEYRG++EF P+YQ+KVDRFFF
Sbjct: 160 RRNSILAYFDDPQYRRNSSGITKYGTIEVHSIVKKEDFIEYRGVKEFXPRYQMKVDRFFF 219
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHIL SSSIMVRNNSIIGV T ITLN +SRVGGLVRV
Sbjct: 220 IPEEVHILPGSSSIMVRNNSIIGVGTRITLNTRSRVGGLVRV 261
[19][TOP]
>UniRef100_A9XW73 DNA-directed RNA polymerase (Fragment) n=1 Tax=Eucryphia lucida
RepID=A9XW73_EUCLU
Length = 1280
Score = 242 bits (618), Expect = 1e-62
Identities = 130/220 (59%), Positives = 158/220 (71%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R S+ V+N+QVR +C
Sbjct: 463 SLHKDQDQMNVHSLSVERRYISSLSVNNDQVRHKFFSSDLSGKKESRIPHYSEFNLIICT 522
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
HC+ ++P I + S+LLAK+R N+FIIPF +S +ER ELMP IS+EIPI GI +
Sbjct: 523 GHCNLIYPAILHENSDLLAKRRINKFIIPF--QSTQEREKELMPRSGISIEIPISGIFRR 580
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSI AYFDDPQYR +SSGI KY TIG+HSI +KEDLIEYRG++EFKPKYQ+KVDRFFFIP
Sbjct: 581 NSIFAYFDDPQYRRKSSGITKYGTIGVHSIVKKEDLIEYRGVKEFKPKYQMKVDRFFFIP 640
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EV+IL E SSIMVRNNSIIGV+T ITLN +SRVGGLV+V
Sbjct: 641 EEVYILPEYSSIMVRNNSIIGVDTQITLNTRSRVGGLVQV 680
[20][TOP]
>UniRef100_A6YAK2 RNA polymerase beta' subunit (Fragment) n=1 Tax=Corylopsis
pauciflora RepID=A6YAK2_9MAGN
Length = 821
Score = 242 bits (618), Expect = 1e-62
Identities = 133/222 (59%), Positives = 156/222 (70%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQMS HSL +R SN V+N+QVR +C
Sbjct: 24 SLHKDQDQMSVHSLSVERRYISNLSVTNDQVRHKLFSSDLSGKKEGRIPDYSELNRIICT 83
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD----ISVEIPIDGII 308
HC+ ++ I + S LLAK+RRNRFIIPF + I+ER E MP IS+EIPI+GI
Sbjct: 84 GHCNLIYXAILRENSYLLAKRRRNRFIIPF--QPIQEREKEQMPHSDSGISIEIPINGIF 141
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+NSILAYFDDP+YR SSGI KY TI +HSI +KEDLIEYRG++EFKPKYQ+KVDRFFF
Sbjct: 142 RRNSILAYFDDPRYRRNSSGITKYGTIEVHSIVKKEDLIEYRGVKEFKPKYQMKVDRFFF 201
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHIL SSSIMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 202 IPEEVHILPGSSSIMVRNNSIIGVDTRITLNTRSRVGGLVRV 243
[21][TOP]
>UniRef100_A9XW93 DNA-directed RNA polymerase n=1 Tax=Liquidambar styraciflua
RepID=A9XW93_LIQST
Length = 1390
Score = 242 bits (617), Expect = 2e-62
Identities = 131/222 (59%), Positives = 158/222 (71%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R SN V+N+QVR +C
Sbjct: 494 SLHKDQDQMNVHSLSVERRYISNLSVTNDQVRHKLFSSDISGKKEGRIPDYSELNRIICS 553
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD----ISVEIPIDGII 308
HC+ ++P I + S+LLAK+RRNRFIIPF +SI+ER E MP IS+EIPI+GI
Sbjct: 554 GHCNLIYPAILRENSDLLAKRRRNRFIIPF--QSIQEREKEQMPHSNSGISIEIPINGIF 611
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+NSILAYFDDP+YR +SSGI KY TI +HSI +KEDLIE RG++EFKP+YQ+KVDRFFF
Sbjct: 612 RRNSILAYFDDPRYRRKSSGITKYGTIEVHSIVKKEDLIECRGVKEFKPRYQMKVDRFFF 671
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+E HIL SSSIMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 672 IPEEAHILPGSSSIMVRNNSIIGVDTQITLNTRSRVGGLVRV 713
[22][TOP]
>UniRef100_A6YAL1 RNA polymerase beta' subunit (Fragment) n=1 Tax=Liquidambar
styraciflua RepID=A6YAL1_LIQST
Length = 830
Score = 242 bits (617), Expect = 2e-62
Identities = 131/222 (59%), Positives = 158/222 (71%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R SN V+N+QVR +C
Sbjct: 27 SLHKDQDQMNVHSLSVERRYISNLSVTNDQVRHKLFSSDISGKKEGRIPDYSELNRIICS 86
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD----ISVEIPIDGII 308
HC+ ++P I + S+LLAK+RRNRFIIPF +SI+ER E MP IS+EIPI+GI
Sbjct: 87 GHCNLIYPAILRENSDLLAKRRRNRFIIPF--QSIQEREKEQMPHSNSGISIEIPINGIF 144
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+NSILAYFDDP+YR +SSGI KY TI +HSI +KEDLIE RG++EFKP+YQ+KVDRFFF
Sbjct: 145 RRNSILAYFDDPRYRRKSSGITKYGTIEVHSIVKKEDLIECRGVKEFKPRYQMKVDRFFF 204
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+E HIL SSSIMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 205 IPEEAHILPGSSSIMVRNNSIIGVDTQITLNTRSRVGGLVRV 246
[23][TOP]
>UniRef100_A4GGA7 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Phaseolus vulgaris
RepID=RPOC2_PHAVU
Length = 1366
Score = 242 bits (617), Expect = 2e-62
Identities = 127/221 (57%), Positives = 160/221 (72%), Gaps = 28/221 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
S KDQDQ++ HSL T +R+ N L SNN++R +C
Sbjct: 490 STRKDQDQLNIHSLSTGERDICNHLASNNKIRHKLFHFNPSEKKERRISDYSIINQIICI 549
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELM--PDISVEIPIDGIIHK 302
DHCHF HP I DT++LLAK+RRNRFIIPF F+SI+ER+ LM IS+EIPI+G+ +
Sbjct: 550 DHCHFTHPAIFHDTTDLLAKRRRNRFIIPFQFQSIQERDKALMLASSISIEIPINGLFRR 609
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKED-LIEYRGIREFKPKYQIKVDRFFFI 125
NSI AYFDDPQYRTQSSGI KY+TI I+ I +KED +IEY G++EFK KYQ+KVD+FFFI
Sbjct: 610 NSIFAYFDDPQYRTQSSGITKYRTIDINYILKKEDFVIEYPGVKEFKTKYQMKVDQFFFI 669
Query: 124 PQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
P+EV+IL E SSIMVRNNSI+ V+TPIT+N +S+V GLVR+
Sbjct: 670 PEEVYILPEFSSIMVRNNSIVEVDTPITVNIRSQVSGLVRL 710
[24][TOP]
>UniRef100_A6YAK5 RNA polymerase beta' subunit (Fragment) n=1 Tax=Exbucklandia
populnea RepID=A6YAK5_9MAGN
Length = 802
Score = 241 bits (616), Expect = 2e-62
Identities = 131/224 (58%), Positives = 158/224 (70%), Gaps = 31/224 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR---------------------------L 482
SL KDQDQM+ HSL +R SN V+N+QVR +
Sbjct: 2 SLHKDQDQMNVHSLSVERRFISNLSVTNDQVRHKLFSFSSDLSGKKEGGIPDYSELNRMI 61
Query: 481 CPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD----ISVEIPIDG 314
C HC+ ++P I + S+LLAK+RRNRFIIPF +SI+ER E MP IS+EIPI+G
Sbjct: 62 CTGHCNLIYPAILRENSDLLAKRRRNRFIIPF--QSIQEREKEQMPHSDSGISIEIPING 119
Query: 313 IIHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRF 134
I +NSILAYFDDP+YR SSGI KY TI +HSI +K+DLIEYRG++EFKP+YQ+KVDRF
Sbjct: 120 IFRRNSILAYFDDPRYRRNSSGITKYGTIEVHSIVKKQDLIEYRGVKEFKPRYQMKVDRF 179
Query: 133 FFIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
FFIP+EVHIL SS IMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 180 FFIPEEVHILPGSSFIMVRNNSIIGVDTRITLNTRSRVGGLVRV 223
[25][TOP]
>UniRef100_A1XK53 RNA polymerase beta chain (Fragment) n=1 Tax=Ilex sp. Qiu 94038
RepID=A1XK53_9AQUA
Length = 866
Score = 241 bits (615), Expect = 3e-62
Identities = 130/220 (59%), Positives = 157/220 (71%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ +SL +R SN V+NNQVR +C
Sbjct: 45 SLHKDQDQMNAYSLSVKRRYISNLSVTNNQVRHKFFRSDFSGKKEDRIPDYSELNRIICT 104
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
C+ ++P I P+ S+LLAK RRNRFIIP +SI+ER NELMP DIS+EIPI+GI +
Sbjct: 105 GRCNLIYPAILPENSDLLAKSRRNRFIIPL--QSIQERENELMPRSDISIEIPINGIFRR 162
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
SILAYFDDP+YR +S GI KY TI +HSI +KEDLIEYRG++E +PKYQ+KVDRFFFIP
Sbjct: 163 KSILAYFDDPRYRRKSLGITKYGTIEVHSIVKKEDLIEYRGVKEVRPKYQMKVDRFFFIP 222
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSSIMVR+ SIIGV+T ITLN +SRVGGLVRV
Sbjct: 223 EEVHILPGSSSIMVRBXSIIGVDTQITLNTRSRVGGLVRV 262
[26][TOP]
>UniRef100_A9XWB6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Stachyurus praecox
RepID=A9XWB6_9ROSI
Length = 1280
Score = 241 bits (614), Expect = 4e-62
Identities = 130/220 (59%), Positives = 158/220 (71%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
+L KDQDQM HS+ +R S+ V+N+QVR +C
Sbjct: 463 ALHKDQDQMYLHSISVERRYGSSLSVNNDQVRHKFLNSDLYGKKKVRISGYSELSRIICI 522
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
HC+F++P I + S+LLAK+RRNR IIPF +SI+E+ ELM IS+EIPI+GI +
Sbjct: 523 GHCNFIYPAILHENSDLLAKRRRNRLIIPF--QSIQEQEKELMSHSGISIEIPINGIFRR 580
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+Y SSGI KY TIG+HSI +KEDLIEYRG++EFKPKYQ+KVDRFFFIP
Sbjct: 581 NSILAYFDDPRYTRNSSGITKYGTIGVHSIVKKEDLIEYRGVKEFKPKYQMKVDRFFFIP 640
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL ESSSIMVRNNSIIGV+T I LN +SRVGGLVRV
Sbjct: 641 EEVHILPESSSIMVRNNSIIGVDTRIALNTRSRVGGLVRV 680
[27][TOP]
>UniRef100_A6YAJ8 RNA polymerase beta' subunit (Fragment) n=1 Tax=Altingia excelsa
RepID=A6YAJ8_9MAGN
Length = 840
Score = 241 bits (614), Expect = 4e-62
Identities = 131/222 (59%), Positives = 158/222 (71%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R SN V+N+QVR +C
Sbjct: 42 SLHKDQDQMNVHSLSVERRYISNLSVTNDQVRHKLFSSDISGKKEGRIPDYSELNRIICS 101
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD----ISVEIPIDGII 308
HC+ ++P I + S+LLAK+RRNRFIIPF +SI+ER E MP IS+EIPI+GI
Sbjct: 102 GHCNLIYPAILRENSDLLAKRRRNRFIIPF--QSIQEREKEQMPHSNSGISIEIPINGIF 159
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+NSILAYFDDP+YR +SSGI KY TI +HSI +KEDLIE RG++EFKP+YQ+KVD FFF
Sbjct: 160 RRNSILAYFDDPRYRRKSSGITKYGTIEVHSIVKKEDLIECRGVKEFKPRYQMKVDLFFF 219
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHIL SSSIMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 220 IPEEVHILPGSSSIMVRNNSIIGVDTQITLNTRSRVGGLVRV 261
[28][TOP]
>UniRef100_P12227 DNA-directed RNA polymerase subunit beta'' (Fragment) n=1 Tax=Pisum
sativum RepID=RPOC2_PEA
Length = 1163
Score = 241 bits (614), Expect = 4e-62
Identities = 128/219 (58%), Positives = 153/219 (69%), Gaps = 27/219 (12%)
Frame = -2
Query: 577 LLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCPD 473
L KDQDQ++ SL K N SN L N+QV+ +C D
Sbjct: 287 LRKDQDQITMDSLSNGKTNISNLLERNDQVKHKLFRFNTFGTKEKGISDYSIFNEIICTD 346
Query: 472 HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHKN 299
H + P I DT LAK+RRNRF+IPF F+SI+ER NE M +S+EIPI+GI H+N
Sbjct: 347 HSY---PAIFHDTFYFLAKRRRNRFLIPFPFQSIQERKNERMSPSGVSIEIPINGIFHRN 403
Query: 298 SILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQ 119
SI AYFDDPQYR SSGI KY+TIGIHSIFQKED IEYRGI+E KPK QI+VDRFFFIP+
Sbjct: 404 SIFAYFDDPQYRRHSSGITKYRTIGIHSIFQKEDFIEYRGIKELKPKSQIQVDRFFFIPE 463
Query: 118 EVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
EVHIL +SSS+MVRNNS++G+ TPIT N +SRVGGLVR+
Sbjct: 464 EVHILPKSSSLMVRNNSLVGIGTPITFNIRSRVGGLVRL 502
[29][TOP]
>UniRef100_A9XWB7 DNA-directed RNA polymerase n=1 Tax=Staphylea colchica
RepID=A9XWB7_9ROSI
Length = 1390
Score = 240 bits (613), Expect = 5e-62
Identities = 128/220 (58%), Positives = 159/220 (72%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
+L KDQDQM HS+ +R +S+ +N+QVR +C
Sbjct: 494 ALHKDQDQMYLHSVSVERRESSSLSANNDQVRHKFLNSDPYGKKKVRISGYSELNRIICI 553
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
HC+F++P I + S+LLAK+RRNR IIPF +SI+E+ EL+ IS+EIPI+GI +
Sbjct: 554 GHCNFIYPAILHENSDLLAKRRRNRLIIPF--QSIQEQEKELLSHSGISIEIPINGIFRR 611
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR SSGI KY TIG+HSI +KEDLIEYRG++EFKPKY++KVDRFFFIP
Sbjct: 612 NSILAYFDDPRYRRNSSGITKYGTIGVHSIVKKEDLIEYRGVKEFKPKYKMKVDRFFFIP 671
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL ESSSIMVRNNSIIGV+T I LN +SRVGGLVRV
Sbjct: 672 EEVHILPESSSIMVRNNSIIGVDTRIALNTRSRVGGLVRV 711
[30][TOP]
>UniRef100_A1XK17 RNA polymerase beta chain (Fragment) n=1 Tax=Nelumbo nucifera
RepID=A1XK17_NELNU
Length = 866
Score = 240 bits (613), Expect = 5e-62
Identities = 133/221 (60%), Positives = 156/221 (70%), Gaps = 28/221 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------------------LC 479
SL KDQDQMS HSL R SN V+N+QVR +C
Sbjct: 45 SLHKDQDQMSVHSLSVEGRYISNLSVTNDQVRHKLFSSDPSSCKKGERILDFSGPDRIIC 104
Query: 478 PDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIH 305
HC+F++P I + S+LLAK+RRNRFIIPF +S +ER ELMP IS+EIPI+GI
Sbjct: 105 NGHCNFIYPAILHENSDLLAKRRRNRFIIPF--QSNQEREKELMPRAGISIEIPINGIFR 162
Query: 304 KNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFI 125
+NSILAYFDDP+YR SSGI KY TI +HSI +KEDLIEYR +EF+PKYQ KVDRFFFI
Sbjct: 163 RNSILAYFDDPRYRRNSSGITKYGTIEVHSIVKKEDLIEYRRAKEFRPKYQKKVDRFFFI 222
Query: 124 PQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
P+EVHIL SSSI+VRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 223 PEEVHILPGSSSILVRNNSIIGVDTRITLNTRSRVGGLVRV 263
[31][TOP]
>UniRef100_A1XK13 RNA polymerase beta chain (Fragment) n=1 Tax=Meliosma squamulata
RepID=A1XK13_9MAGN
Length = 861
Score = 240 bits (613), Expect = 5e-62
Identities = 126/218 (57%), Positives = 154/218 (70%), Gaps = 25/218 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQ++ HSL +R+ SN V+N+QVR +C
Sbjct: 45 SLHKDQDQINLHSLSVERRSISNLSVTNDQVRHKLFSSDLSGKKRGRILDYSGPDRIICN 104
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISVEIPIDGIIHKNS 296
DHC+F +P + S+LLAK+RRNRFIIPF RE+ L IS+EIPI+G+ +NS
Sbjct: 105 DHCNFRYPATLHENSDLLAKRRRNRFIIPFQSNQEREKELMLCSGISIEIPINGLFRRNS 164
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQE 116
ILAYFDDP+YR SSGI KY TI +HSI +KEDLIEYR ++EF+PKYQ+KVDRFFFIP+E
Sbjct: 165 ILAYFDDPRYRRNSSGITKYGTIEVHSILKKEDLIEYRRVKEFRPKYQMKVDRFFFIPEE 224
Query: 115 VHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
VHIL SSSIMV+NNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 225 VHILPGSSSIMVQNNSIIGVDTRITLNTRSRVGGLVRV 262
[32][TOP]
>UniRef100_A9XW97 DNA-directed RNA polymerase (Fragment) n=1 Tax=Morella cerifera
RepID=A9XW97_MYRCE
Length = 1274
Score = 240 bits (612), Expect = 7e-62
Identities = 128/222 (57%), Positives = 159/222 (71%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR---------------------------L 482
SL KDQDQ++ HSL R++S+ +N++VR +
Sbjct: 459 SLQKDQDQINVHSLSVKGRSSSSLSGNNDKVRQKFFSSDLFGKKKKESRIPDYLELNRII 518
Query: 481 CPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGII 308
C HC+ ++P I + S+LLAK+RRNRFIIPF SI+ER ELM IS+EIP++GI
Sbjct: 519 CIGHCNLIYPAILYENSDLLAKRRRNRFIIPF--HSIQEREKELMSPSGISIEIPVNGIF 576
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
KNSILAYFDDPQYR ++SGI KY TIG+HSI +KEDLIEYRG++EFKPKYQ+K+DRFFF
Sbjct: 577 RKNSILAYFDDPQYRRKNSGITKYGTIGVHSILKKEDLIEYRGVQEFKPKYQMKIDRFFF 636
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHIL ES SIMV+NNSIIGV+T ITLN +SR GGLVRV
Sbjct: 637 IPEEVHILPESCSIMVQNNSIIGVDTRITLNTRSRAGGLVRV 678
[33][TOP]
>UniRef100_A9XW87 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixerba brexioides
RepID=A9XW87_IXEBR
Length = 1283
Score = 240 bits (612), Expect = 7e-62
Identities = 129/219 (58%), Positives = 156/219 (71%), Gaps = 29/219 (13%)
Frame = -2
Query: 571 KDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCPDHC 467
KDQDQMS HS+ +R S+ V N+QVR +C HC
Sbjct: 464 KDQDQMSIHSISVERRYISSLSVDNDQVRHKFFSSYLSGKKEVRIPDYSELNRIICTGHC 523
Query: 466 HFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHKNSI 293
HF++P I + +LLAK+RRNRF+IPF +SI+E+ EL+P IS+EIPI+GI +NSI
Sbjct: 524 HFIYPAILHENFDLLAKRRRNRFLIPF--QSIQEQEKELLPHSGISIEIPINGIFRRNSI 581
Query: 292 LAYFDDPQYRTQSSGIAKYKTIGIHSIF--QKEDLIEYRGIREFKPKYQIKVDRFFFIPQ 119
LAYFDDPQYR SSGI KY T+G+HSI +KEDLIEYRG++EFKPK Q+KVD FFFIP+
Sbjct: 582 LAYFDDPQYRRNSSGITKYGTLGVHSIIKKEKEDLIEYRGVKEFKPKCQMKVDLFFFIPE 641
Query: 118 EVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
EVHIL ESSSIMVRNNSIIGV+T ITLN +SR GGLVRV
Sbjct: 642 EVHILPESSSIMVRNNSIIGVDTRITLNTRSRAGGLVRV 680
[34][TOP]
>UniRef100_A9XW78 DNA-directed RNA polymerase n=1 Tax=Gunnera manicata
RepID=A9XW78_9MAGN
Length = 1386
Score = 240 bits (612), Expect = 7e-62
Identities = 131/220 (59%), Positives = 154/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R SNF NNQVR +C
Sbjct: 494 SLHKDQDQMNVHSLSVEQRYISNFSAINNQVRHKLFSSDLYGKKEGSIPDYSELNRIICT 553
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
HC+F++P I + LLAK+RRNRFIIPF +SI+ER ELMP IS+EIPI+GI +
Sbjct: 554 GHCNFIYPAILHENFYLLAKRRRNRFIIPF--QSIQEREKELMPRSGISIEIPINGIFRR 611
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDD +YR SGI KY TI +HSI +KEDLIEYRG++EF+PKYQIKVDRFFFIP
Sbjct: 612 NSILAYFDDFRYRRTGSGITKYGTIEMHSIIKKEDLIEYRGVKEFRPKYQIKVDRFFFIP 671
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SS +MVRNNSIIGV+T IT N +SRVGGLVRV
Sbjct: 672 EEVHILPGSSYVMVRNNSIIGVDTQITFNTRSRVGGLVRV 711
[35][TOP]
>UniRef100_A6YAL9 RNA polymerase beta' subunit (Fragment) n=1 Tax=Saxifraga
integrifolia RepID=A6YAL9_SAXIN
Length = 812
Score = 239 bits (610), Expect = 1e-61
Identities = 128/219 (58%), Positives = 160/219 (73%), Gaps = 26/219 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR----------------------LCPDHC 467
SL KDQDQ++ HSL ++ SN V+N+QVR +C DHC
Sbjct: 22 SLHKDQDQINVHSLSVEQKYISNLSVTNDQVRHKLFRLDRSGKRITDYSELNGIICTDHC 81
Query: 466 HFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD----ISVEIPIDGIIHKN 299
+ ++P I + S+LL+K+R+NRF+IPF +SI+ER E MP IS+EIPI+GI+ K
Sbjct: 82 NTIYPAIHYENSDLLSKRRKNRFMIPF--QSIQEREKEKMPHLDSGISIEIPINGILRKK 139
Query: 298 SILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQ 119
SILAYFDDP+YR SSGI KY TI +HSI +KEDLIEYRG +EFKP+YQ++VDRFFFIP+
Sbjct: 140 SILAYFDDPRYRRNSSGITKYGTIEVHSIVKKEDLIEYRGGKEFKPRYQMQVDRFFFIPE 199
Query: 118 EVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
EVHIL SSSIMVRNNSIIGV+T ITLNK+SRVGGLVR+
Sbjct: 200 EVHILPGSSSIMVRNNSIIGVSTRITLNKRSRVGGLVRM 238
[36][TOP]
>UniRef100_A9XWB8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Strasburgeria robusta
RepID=A9XWB8_9ROSI
Length = 1281
Score = 239 bits (609), Expect = 1e-61
Identities = 130/219 (59%), Positives = 155/219 (70%), Gaps = 29/219 (13%)
Frame = -2
Query: 571 KDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCPDHC 467
KDQDQMS HS+ + S+ V N+QVR +C HC
Sbjct: 463 KDQDQMSIHSISVERGYISSLSVDNDQVRHKFFSSYLSGKKEVRIPDYSELNRIICTAHC 522
Query: 466 HFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHKNSI 293
HF++P I + +LLAK+RRNRFIIPF +SI+E+ EL+P IS+EIPI+GI +NSI
Sbjct: 523 HFIYPAILHENFDLLAKRRRNRFIIPF--QSIQEQEKELLPHSGISIEIPINGIFRRNSI 580
Query: 292 LAYFDDPQYRTQSSGIAKYKTIGIHSIF--QKEDLIEYRGIREFKPKYQIKVDRFFFIPQ 119
LAYFDDPQYR SSGI KY T+G+HSI +KEDLIEYRG++EFKPK Q KVDRFFFIP+
Sbjct: 581 LAYFDDPQYRRNSSGITKYGTLGVHSIIKKEKEDLIEYRGVKEFKPKCQTKVDRFFFIPE 640
Query: 118 EVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
EVHIL ESSSIMVRNNSIIGV+T ITLN +SR GGLVRV
Sbjct: 641 EVHILPESSSIMVRNNSIIGVDTRITLNTRSRSGGLVRV 679
[37][TOP]
>UniRef100_A6YAJ9 RNA polymerase beta' subunit (Fragment) n=1 Tax=Aphanopetalum
resinosum RepID=A6YAJ9_9MAGN
Length = 811
Score = 239 bits (609), Expect = 1e-61
Identities = 129/222 (58%), Positives = 158/222 (71%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL + SN V+N+QVR +C
Sbjct: 41 SLHKDQDQMNVHSLSVERGYISNPSVTNDQVRHKNLSSNFSGKKEGRIPDYSEFNRLICT 100
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDI----SVEIPIDGII 308
HC+ ++PTI + S+LLAK+RRNRFIIPF+ S++ER E +P + S+EIPI+GI
Sbjct: 101 SHCNLIYPTILHENSDLLAKRRRNRFIIPFI--SLQEREKEQIPYLESGSSIEIPINGIF 158
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+NSI AYFDDP+YR +SSGI KY TI +HSI +KEDLIEYRG++EFKP+YQ+KVDRFFF
Sbjct: 159 RRNSIFAYFDDPKYRRKSSGITKYGTIELHSIVKKEDLIEYRGVKEFKPRYQMKVDRFFF 218
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHIL SSSIMVRNNSIIGV T ITLN +SRVGGLVRV
Sbjct: 219 IPEEVHILPGSSSIMVRNNSIIGVGTRITLNTRSRVGGLVRV 260
[38][TOP]
>UniRef100_A9XWC5 DNA-directed RNA polymerase n=2 Tax=Trochodendron aralioides
RepID=A9XWC5_TROAR
Length = 1381
Score = 238 bits (608), Expect = 2e-61
Identities = 130/220 (59%), Positives = 158/220 (71%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ SL + SN V+N+QV+ +C
Sbjct: 494 SLHKDQDQMNVQSLSVERTYISNLSVTNDQVKHKLFSFDPSGKKGGRILDYSGPNRIICN 553
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
HC+F++P I + S+LLAK+RRNRFIIPF +S +ER ELMP IS+EIPI+GI +
Sbjct: 554 GHCNFIYPAILHENSDLLAKRRRNRFIIPF--QSNQEREKELMPRSGISIEIPINGIFRR 611
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR +SSGI KY TI +HSI +KEDLIEYRG +EF+PKYQ+KVDRFFFIP
Sbjct: 612 NSILAYFDDPRYRRKSSGITKYGTIEVHSIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIP 671
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EV+IL SSSIMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 672 EEVYILPGSSSIMVRNNSIIGVDTRITLNTRSRVGGLVRV 711
[39][TOP]
>UniRef100_A6YAL5 RNA polymerase beta' subunit (Fragment) n=1 Tax=Peridiscus lucidus
RepID=A6YAL5_9MAGN
Length = 828
Score = 238 bits (608), Expect = 2e-61
Identities = 131/224 (58%), Positives = 160/224 (71%), Gaps = 31/224 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R SN V+N+QVR +C
Sbjct: 29 SLHKDQDQMNVHSLSVERRYISNLSVTNDQVRHKLFSSNLSGKKEGRIPDYSELNRIICT 88
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD----ISVEIPIDGII 308
HC+ ++P I + S+LLAK RRNRFIIPF +SI+ER E MP IS+EIPI+GI
Sbjct: 89 GHCNLIYPAILHENSDLLAKGRRNRFIIPF--QSIQEREKEQMPHSDSGISIEIPINGIF 146
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIE--YRGIREFKPKYQIKVDRF 134
+NSILAYFDDP+YR +SSGI KY+TI +HSI +K+DLIE YRG++EFKP+YQ+KV+RF
Sbjct: 147 RRNSILAYFDDPRYRRKSSGITKYETIEVHSIVKKKDLIEFEYRGVKEFKPRYQMKVNRF 206
Query: 133 FFIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
FFIP+EVHIL+ SSSIMVRNNSIIGVNT I LN +SRVGGLVRV
Sbjct: 207 FFIPEEVHILTGSSSIMVRNNSIIGVNTRIALNTRSRVGGLVRV 250
[40][TOP]
>UniRef100_A1XK93 RNA polymerase beta chain (Fragment) n=1 Tax=Staphylea trifolia
RepID=A1XK93_STATR
Length = 866
Score = 238 bits (608), Expect = 2e-61
Identities = 127/220 (57%), Positives = 159/220 (72%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
+L KDQDQM HS+ +R +S+ +N+QVR +C
Sbjct: 45 ALHKDQDQMYLHSVSVERRESSSLSANNDQVRHKFLNSDPYGKKKVRISGYSELNRIICI 104
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
HC+F++P I + S+LLAK+RRNR IIPF +SI+E+ EL+ IS+EIPI+GI +
Sbjct: 105 GHCNFIYPAILHENSDLLAKRRRNRLIIPF--QSIQEQEKELLSHSGISIEIPINGIFRR 162
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR SSGI KY TIG+HSI +KEDLIEYRG++E+KPKY++KVDRFFFIP
Sbjct: 163 NSILAYFDDPRYRRNSSGITKYGTIGVHSIVKKEDLIEYRGVKEWKPKYKMKVDRFFFIP 222
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL ESSSIMVRNNSIIGV+T I LN +SRVGGLVRV
Sbjct: 223 EEVHILHESSSIMVRNNSIIGVDTRIALNTRSRVGGLVRV 262
[41][TOP]
>UniRef100_A9XW95 DNA-directed RNA polymerase (Fragment) n=1 Tax=Manihot esculenta
RepID=A9XW95_MANES
Length = 1281
Score = 238 bits (606), Expect = 3e-61
Identities = 128/220 (58%), Positives = 157/220 (71%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R S+ V+N+QV+ +C
Sbjct: 464 SLHKDQDQMNVHSLSVKRRYISSPSVNNDQVKHKFFSSDFSGKKESGIPDYSELNRSICT 523
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
HC+ ++ TI S+LLAK+RRN+FIIPF +SI+ER ELM IS+EIPI+GI +
Sbjct: 524 GHCNLIYSTILYKNSDLLAKRRRNKFIIPF--QSIQEREKELMTQSAISIEIPINGIFRR 581
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NS+ AYFDDPQYR +SSGI KY IG+HSI +KEDLIEYRG++EFKPKYQ KVDRFFFIP
Sbjct: 582 NSVFAYFDDPQYRKKSSGITKYGAIGVHSIVKKEDLIEYRGVKEFKPKYQTKVDRFFFIP 641
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EV+IL ESSS+MVRNNSIIGV+T I LN +SRVGGLVRV
Sbjct: 642 EEVYILPESSSLMVRNNSIIGVDTQIALNTRSRVGGLVRV 681
[42][TOP]
>UniRef100_A9XW69 DNA-directed RNA polymerase (Fragment) n=1 Tax=Datisca cannabina
RepID=A9XW69_9ROSI
Length = 1280
Score = 238 bits (606), Expect = 3e-61
Identities = 129/224 (57%), Positives = 158/224 (70%), Gaps = 31/224 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAK----RNTSNFLVSNNQVR------------------------ 485
SL KDQDQ++ HS+ + R S+ V+N+QVR
Sbjct: 459 SLYKDQDQINVHSISVEESVEERYISSLSVNNDQVRQKFFSSDLSGKKESTIPDYSELNG 518
Query: 484 -LCPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDG 314
+C HC+ ++P I S+LLAK+RRNRF+I F S++ER EL+P IS+EIPI+G
Sbjct: 519 IICTGHCNLLYPAIFKGNSDLLAKRRRNRFLIQF--ESLQEREKELLPRSGISIEIPING 576
Query: 313 IIHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRF 134
I +NSILAYFDDPQYR SSGI KY TIG+HSI +KEDLIEYRG++E KPKYQ+KVDRF
Sbjct: 577 IFRRNSILAYFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKELKPKYQMKVDRF 636
Query: 133 FFIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
FFIP+EVHIL ESSSIMVRNNSIIGV+T ITL+ +SRVGGLVRV
Sbjct: 637 FFIPEEVHILPESSSIMVRNNSIIGVDTRITLSTRSRVGGLVRV 680
[43][TOP]
>UniRef100_A6YAL7 RNA polymerase beta' subunit (Fragment) n=1 Tax=Rhodoleia
championii RepID=A6YAL7_9MAGN
Length = 813
Score = 238 bits (606), Expect = 3e-61
Identities = 129/224 (57%), Positives = 157/224 (70%), Gaps = 31/224 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR---------------------------L 482
SL KDQDQM+ HSL +R SN V+N+QVR +
Sbjct: 17 SLHKDQDQMNVHSLSVERRFISNLSVTNDQVRQKLFSFSSDLSGKKESRIPDYSELNRII 76
Query: 481 CPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP----DISVEIPIDG 314
C HC+ ++P I + S+LLAK+RRNRFIIPF +SI+ER E P IS+EIPI+G
Sbjct: 77 CTGHCNLIYPAILRENSDLLAKRRRNRFIIPF--QSIQEREKEQTPYSDSGISIEIPING 134
Query: 313 IIHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRF 134
I +NSILAYFDDP+YR SSGI KY TI +HSI +K+DLIEYRG++EFKP+YQ+KVDRF
Sbjct: 135 IFRRNSILAYFDDPRYRRNSSGITKYGTIEVHSIVKKQDLIEYRGVKEFKPRYQMKVDRF 194
Query: 133 FFIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
FFIP+EVHIL SS IMVRNNSIIGV+T ITLN +S+VGGLVRV
Sbjct: 195 FFIPEEVHILPGSSFIMVRNNSIIGVDTRITLNTRSQVGGLVRV 238
[44][TOP]
>UniRef100_B1NWE0 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Manihot esculenta
RepID=RPOC2_MANES
Length = 1393
Score = 238 bits (606), Expect = 3e-61
Identities = 128/220 (58%), Positives = 157/220 (71%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R S+ V+N+QV+ +C
Sbjct: 494 SLHKDQDQMNVHSLSVKRRYISSPSVNNDQVKHKFFSSDFSGKKESGIPDYSELNRSICT 553
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
HC+ ++ TI S+LLAK+RRN+FIIPF +SI+ER ELM IS+EIPI+GI +
Sbjct: 554 GHCNLIYSTILYKNSDLLAKRRRNKFIIPF--QSIQEREKELMTQSAISIEIPINGIFRR 611
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NS+ AYFDDPQYR +SSGI KY IG+HSI +KEDLIEYRG++EFKPKYQ KVDRFFFIP
Sbjct: 612 NSVFAYFDDPQYRKKSSGITKYGAIGVHSIVKKEDLIEYRGVKEFKPKYQTKVDRFFFIP 671
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EV+IL ESSS+MVRNNSIIGV+T I LN +SRVGGLVRV
Sbjct: 672 EEVYILPESSSLMVRNNSIIGVDTQIALNTRSRVGGLVRV 711
[45][TOP]
>UniRef100_A9XWA8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Qualea parviflora
RepID=A9XWA8_9MYRT
Length = 1272
Score = 237 bits (605), Expect = 4e-61
Identities = 129/221 (58%), Positives = 159/221 (71%), Gaps = 28/221 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVRL---------------CPD--------- 473
SL KDQDQM+ S +RN S+ LV+N+Q+R PD
Sbjct: 460 SLHKDQDQMNLRSTERERRNISSLLVNNDQMRYKLLSSDFYDKIKGDKIPDYSELNRIIS 519
Query: 472 --HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIH 305
HC+ + T + S+LLAK+RRNRF+IP +SI ER ELMP IS+E+P++GI+
Sbjct: 520 TVHCNLKYLTTLHENSDLLAKRRRNRFLIPL--QSIEERKKELMPHLGISIELPLNGILR 577
Query: 304 KNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFI 125
+NSILAYFDDP+YR +SSGI KY TIG+HSI +KEDLIEYRGI+EFKPKYQ+K+DRFFFI
Sbjct: 578 RNSILAYFDDPRYRRKSSGITKYGTIGVHSIVKKEDLIEYRGIKEFKPKYQMKIDRFFFI 637
Query: 124 PQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
P+EVHIL ESSSIMVRNNS+IGV+T I LN +SRVGGLVRV
Sbjct: 638 PEEVHILPESSSIMVRNNSLIGVDTSIALNIRSRVGGLVRV 678
[46][TOP]
>UniRef100_A1XK09 RNA polymerase beta chain (Fragment) n=1 Tax=Pachysandra procumbens
RepID=A1XK09_PACPR
Length = 866
Score = 237 bits (604), Expect = 6e-61
Identities = 129/220 (58%), Positives = 154/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R SN +N+QVR +C
Sbjct: 45 SLHKDQDQMNGHSLSAERRYISNLSATNDQVRHKLFSSDPSDKKGGRILDYSGPNRIICN 104
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
H +F++PTI + S+LLAK+RRNRFIIP F +ER ELMP IS+EIPI+GI +
Sbjct: 105 SHLNFIYPTILHENSDLLAKRRRNRFIIPLQFN--QEREKELMPCSGISIEIPINGIFRR 162
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR +SSGI KY TI +HSI +KED IEYRG +EF+PKYQ+KVDRFFFIP
Sbjct: 163 NSILAYFDDPRYRRKSSGITKYGTIEVHSIVKKEDFIEYRGAKEFRPKYQMKVDRFFFIP 222
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHI SSSIMVRNNSIIGV+T ITLN +SRVGGL RV
Sbjct: 223 EEVHIFPGSSSIMVRNNSIIGVDTQITLNIRSRVGGLARV 262
[47][TOP]
>UniRef100_A6YAK8 RNA polymerase beta' subunit (Fragment) n=1 Tax=Heuchera micrantha
RepID=A6YAK8_HEUMI
Length = 802
Score = 236 bits (603), Expect = 7e-61
Identities = 127/219 (57%), Positives = 157/219 (71%), Gaps = 26/219 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR----------------------LCPDHC 467
SL KDQDQ++ HSL ++ SN V+N+QVR +C HC
Sbjct: 5 SLHKDQDQLNVHSLSVERKYISNLSVTNDQVRHKLFSSDRSGKRIPYYSELNRIICTXHC 64
Query: 466 HFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD----ISVEIPIDGIIHKN 299
+F++P I + +LL+K+R+NR IIPF +SI+ER E MP IS+EIPI+GI KN
Sbjct: 65 NFIYPAILHENYDLLSKRRKNRLIIPF--QSIQEREKEQMPHSDSGISIEIPINGIFRKN 122
Query: 298 SILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQ 119
SI AYFDDP+YR SSGI KY TI +HSI +KEDLIEYRG +EFKP+YQ++VDRFFFIP+
Sbjct: 123 SIXAYFDDPRYRRNSSGITKYGTIEVHSIVKKEDLIEYRGGKEFKPRYQMQVDRFFFIPE 182
Query: 118 EVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
EVHIL SSSIMVRNNSIIGV+T ITLNK+SRVGGLVR+
Sbjct: 183 EVHILPGSSSIMVRNNSIIGVSTRITLNKRSRVGGLVRM 221
[48][TOP]
>UniRef100_A9XWC0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Suriana maritima
RepID=A9XWC0_9FABA
Length = 1274
Score = 236 bits (602), Expect = 1e-60
Identities = 130/222 (58%), Positives = 159/222 (71%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ +SL R SN V+N+ +R +C
Sbjct: 461 SLHKDQDQMNINSLSAGGRYISNLSVNNDPLRHEFFSSNLSGKKESGIPDYSGLNRIICL 520
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISV--EIPIDGIIHK 302
HC+F++P I + S+LLAK+RRNRFIIPF +SI+E++ ELMP ++ EIPI+GI +
Sbjct: 521 GHCNFIYPDILHENSDLLAKRRRNRFIIPF--QSIQEQDKELMPGSAIWMEIPINGIFRR 578
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
SILAYFDDPQYR +SSGI KY TIG+HSI +KEDLIEYRG++EFK KYQ+KVDRFFFIP
Sbjct: 579 KSILAYFDDPQYRKKSSGITKYSTIGVHSILKKEDLIEYRGVKEFKLKYQMKVDRFFFIP 638
Query: 121 QEVHIL--SESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHI S SSSIMVRNNS+I VNTPITLN +SRVGGLVRV
Sbjct: 639 EEVHIFPESSSSSIMVRNNSLIEVNTPITLNIRSRVGGLVRV 680
[49][TOP]
>UniRef100_A9XW92 DNA-directed RNA polymerase (Fragment) n=1 Tax=Leonia glycycarpa
RepID=A9XW92_9ROSI
Length = 1274
Score = 236 bits (602), Expect = 1e-60
Identities = 128/220 (58%), Positives = 153/220 (69%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL K S+ + N+QV+ LC
Sbjct: 461 SLHKDQDQMNIHSLSVEKSYISSPSIKNDQVKHKFFNLDLSGKKERGIPDYSELNRILCT 520
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
HC+ ++P I +LLAKKRRNRFI+PF + I ER NELMP DIS+EIPI+G+
Sbjct: 521 GHCNLIYPAIPHKNFDLLAKKRRNRFIMPF--QPIHERENELMPHSDISIEIPINGMFRG 578
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSI AYFDDPQYR SGI KY IG HSI +KEDLIEYRG++EFKPKYQ+KVDRFFFIP
Sbjct: 579 NSIFAYFDDPQYRRNCSGITKYGAIGAHSIVKKEDLIEYRGVKEFKPKYQMKVDRFFFIP 638
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EV+IL ESSS+MV+NNSIIGV+T ITLN +SRVGGLVR+
Sbjct: 639 EEVYILPESSSLMVQNNSIIGVDTQITLNTRSRVGGLVRL 678
[50][TOP]
>UniRef100_A9XW94 DNA-directed RNA polymerase (Fragment) n=1 Tax=Lythrum flagellare
RepID=A9XW94_9MYRT
Length = 1283
Score = 236 bits (601), Expect = 1e-60
Identities = 129/221 (58%), Positives = 158/221 (71%), Gaps = 28/221 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------------------LC 479
SL KDQDQM+ SL +R S+ V+N+Q+R +C
Sbjct: 461 SLHKDQDQMNLRSLSVKQRYLSSLSVNNDQIRYKLGSSYFSGKKKEDRSPYYSEINRIIC 520
Query: 478 PDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIH 305
HC+ ++P I + S+LLAK+RRNRF+IPF +SI+ER ELMP ISVE+PI GI
Sbjct: 521 TGHCNLIYPAILHENSDLLAKRRRNRFVIPF--QSIQERETELMPHAGISVELPIRGIFR 578
Query: 304 KNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFI 125
+NSILAYFDDP+YR SSGI KY TIG+HS+ +KEDLIEYRGI+EFK KYQ K+DRFFFI
Sbjct: 579 RNSILAYFDDPRYRRNSSGITKYGTIGMHSMVKKEDLIEYRGIKEFKQKYQ-KIDRFFFI 637
Query: 124 PQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
P+EVHIL ESSS+MVRNNS+IGV+T ITLN +SRVGGLVRV
Sbjct: 638 PEEVHILPESSSMMVRNNSLIGVDTRITLNTRSRVGGLVRV 678
[51][TOP]
>UniRef100_A9XWC2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tapiscia sinensis
RepID=A9XWC2_9ROSI
Length = 1280
Score = 235 bits (599), Expect = 2e-60
Identities = 129/220 (58%), Positives = 157/220 (71%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R S+ V+N+QVR L
Sbjct: 461 SLHKDQDQMNIHSLSVERRYISSLAVNNDQVRHGLFSSDFSDKKEGRIPDYSELNRILGT 520
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
HC+ ++ I + +LLAK+RRNRFIIPF +SI+E+ ELMP IS+EIPI+GI +
Sbjct: 521 GHCNLIYSAILHENYDLLAKRRRNRFIIPF--QSIQEQEKELMPRSGISIEIPINGIFRR 578
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILA+FDDPQYR SSGI KY TIG HSI +KED+IEYRG+++FKPKYQ+KVDRFFFIP
Sbjct: 579 NSILAFFDDPQYRRNSSGITKYGTIGAHSIVKKEDVIEYRGVKKFKPKYQMKVDRFFFIP 638
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL ESSSIMVRNNSIIGV+T ITLN +S+V GLVRV
Sbjct: 639 EEVHILPESSSIMVRNNSIIGVDTRITLNTRSQVDGLVRV 678
[52][TOP]
>UniRef100_A9XW43 DNA-directed RNA polymerase (Fragment) n=1 Tax=Alnus viridis subsp.
sinuata RepID=A9XW43_ALNVI
Length = 1273
Score = 235 bits (599), Expect = 2e-60
Identities = 130/217 (59%), Positives = 158/217 (72%), Gaps = 25/217 (11%)
Frame = -2
Query: 577 LLKDQDQMSTHSLPTAK--RNTSNFLVSNNQVRL----------------CPDH-----C 467
L KDQDQ++ HSL + R S+ NNQVR PD+ C
Sbjct: 461 LQKDQDQINVHSLSLSVEGRFLSSLSGKNNQVRQKFFSSDLFGKKKKESGIPDYSKLSRC 520
Query: 466 HFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHKNSI 293
+ ++P I + S+LLAK+RRNRFIIPF +SI+ER ELMP IS+EIP++GI KNSI
Sbjct: 521 NLIYPAILYENSDLLAKRRRNRFIIPF--QSIQEREKELMPPSGISIEIPVNGIFRKNSI 578
Query: 292 LAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEV 113
LAYFDDPQYR ++SGI KY TIG+HSI +KEDLIEYRG++E KPKYQ+K+DRFFFIP+EV
Sbjct: 579 LAYFDDPQYRRKNSGITKYGTIGVHSILKKEDLIEYRGVKEIKPKYQMKIDRFFFIPEEV 638
Query: 112 HILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
HIL ESSSIMV+NNSIIGV+T ITLN +SR GGLVRV
Sbjct: 639 HILPESSSIMVQNNSIIGVDTRITLNTRSRAGGLVRV 675
[53][TOP]
>UniRef100_A1XK08 RNA polymerase beta chain (Fragment) n=1 Tax=Gunnera monoica
RepID=A1XK08_9MAGN
Length = 866
Score = 235 bits (599), Expect = 2e-60
Identities = 128/220 (58%), Positives = 155/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ H+L +R SNF +NNQVR +C
Sbjct: 45 SLHKDQDQMNVHALSVEQRYISNFSATNNQVRHKLFSSDLYGKKEGSIPDYSELNRIICT 104
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
HC+F++P I + LLAK+RRNRFIIPF +SI+ER ELM IS+EIPI+GI+ +
Sbjct: 105 GHCNFIYPAILHENFYLLAKRRRNRFIIPF--QSIQEREKELMSRSVISIEIPINGILRR 162
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDD +YR SGI KY+TI +HSI +KEDLIEYRG++EF PKYQ+KVDRFFFIP
Sbjct: 163 NSILAYFDDFRYRRTGSGITKYETIEMHSIIKKEDLIEYRGVKEFWPKYQMKVDRFFFIP 222
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVH L SS +MVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 223 EEVHTLPGSSYVMVRNNSIIGVDTQITLNTRSRVGGLVRV 262
[54][TOP]
>UniRef100_A1XK23 RNA polymerase beta chain (Fragment) n=1 Tax=Euptelea polyandra
RepID=A1XK23_9MAGN
Length = 796
Score = 234 bits (598), Expect = 3e-60
Identities = 127/220 (57%), Positives = 154/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R SN V+N++ R +C
Sbjct: 45 SLHKDQDQMNVHSLSADRRYISNLPVTNDKARHKLFSSDSSGKKKGGVLDYSIPDRIICN 104
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
HC+F++P + S+ LAK+RRNRFIIPF +S +ER EL+P IS+EIPI+GI +
Sbjct: 105 GHCNFIYPASLHENSDFLAKRRRNRFIIPF--QSNQEREKELIPRSGISIEIPINGIFRR 162
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR SSGI KY TI +HSI +KEDLIEYRG +EF+PKYQ+KVDRFFFIP
Sbjct: 163 NSILAYFDDPRYRRNSSGITKYGTIEVHSIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIP 222
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHI SSSIMVRNNSIIGV+T IT N +SRVGGLVRV
Sbjct: 223 EEVHIFPGSSSIMVRNNSIIGVDTRITFNTRSRVGGLVRV 262
[55][TOP]
>UniRef100_A9XW71 DNA-directed RNA polymerase (Fragment) n=1 Tax=Elaeocarpus
angustifolius RepID=A9XW71_9ROSI
Length = 1263
Score = 234 bits (597), Expect = 4e-60
Identities = 128/219 (58%), Positives = 157/219 (71%), Gaps = 27/219 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R S+ V+N+QVR +C
Sbjct: 463 SLHKDQDQMNFHSLSVERRYISSLSVNNDQVRHKFFSSDLSGKKESRIPHYSELSRIICT 522
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
HC+ ++P I + S+LLAK+RRN+FIIPF +SI+E LMP IS+EIPI GI +
Sbjct: 523 GHCNLIYPAILHENSDLLAKRRRNKFIIPF--QSIQE----LMPRSGISIEIPISGIFRR 576
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSI AYFDDPQYR +SSGI KY TIG+HSI +KEDLIEYRG++EFKPKYQ+K++ FFFIP
Sbjct: 577 NSIFAYFDDPQYRRKSSGITKYGTIGVHSIVKKEDLIEYRGVKEFKPKYQMKINLFFFIP 636
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVR 5
+EV+IL ESSSIMVRNNSIIGV+T ITLN +SRVGGLVR
Sbjct: 637 EEVYILPESSSIMVRNNSIIGVDTQITLNTRSRVGGLVR 675
[56][TOP]
>UniRef100_A1XKC9 RNA polymerase beta chain (Fragment) n=1 Tax=Takhtajania perrieri
RepID=A1XKC9_9MAGN
Length = 746
Score = 234 bits (596), Expect = 5e-60
Identities = 128/220 (58%), Positives = 156/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R +S+ V+N++VR +
Sbjct: 5 SLHKDQDQMNIHSLSVEQRESSDLSVTNDRVRHKLFSSDPSGKKEGKILDYSGPARIISN 64
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
H +F++P I D S+LLAK+RRNRFIIPF + +ER ELMP IS+EIPI+GI+H+
Sbjct: 65 GHWNFIYPAILHDNSDLLAKRRRNRFIIPFQYD--QEREKELMPRSGISIEIPINGILHR 122
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR SSGI KY T+ + SI +KEDLIEYRG +EF PKYQ+KVDRFFFIP
Sbjct: 123 NSILAYFDDPRYRRSSSGITKYGTVEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIP 182
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSSIMVRNNSIIGV+T ITLN +S VGGLVRV
Sbjct: 183 EEVHILPGSSSIMVRNNSIIGVDTRITLNTRSHVGGLVRV 222
[57][TOP]
>UniRef100_A1XK54 RNA polymerase beta chain (Fragment) n=1 Tax=Hedera helix
RepID=A1XK54_HEDHE
Length = 863
Score = 234 bits (596), Expect = 5e-60
Identities = 130/217 (59%), Positives = 154/217 (70%), Gaps = 24/217 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------LCPD--------HC 467
S+ KDQDQM+ HSL +R SN V+N+Q R PD HC
Sbjct: 45 SIHKDQDQMNAHSLSVKRRYISNLSVTNDQARHKFFSSDFSGKKEDRIPDYSELNRIGHC 104
Query: 466 HFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHKNSI 293
+ + I +LLAK+RRNRFIIP +SI+E NELMP IS+EIPI+GI KNSI
Sbjct: 105 NLTYLAILHANYDLLAKRRRNRFIIPL--QSIQEHENELMPSSGISIEIPINGIFRKNSI 162
Query: 292 LAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEV 113
LAYFDDP+YR +SSGI KY TI +HSI +KEDLIEYRG++EF+PKYQ+KVDRFFFIP+EV
Sbjct: 163 LAYFDDPRYRRKSSGITKYGTIEVHSIVKKEDLIEYRGVKEFRPKYQMKVDRFFFIPEEV 222
Query: 112 HILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
HIL SSSIMVRNNSIIGV+T ITL +SRVGGLVRV
Sbjct: 223 HILPGSSSIMVRNNSIIGVDTQITLTTRSRVGGLVRV 259
[58][TOP]
>UniRef100_A9XW66 DNA-directed RNA polymerase (Fragment) n=1 Tax=Crossosoma
californicum RepID=A9XW66_CROCA
Length = 1266
Score = 233 bits (595), Expect = 6e-60
Identities = 127/220 (57%), Positives = 156/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
+L KDQDQ S+ +R +S+ V+N+QVR +C
Sbjct: 445 ALHKDQDQTYRQSISVDRRYSSSLSVNNDQVRHKSLNSDLYGKKKVRISDYSELNRIVCI 504
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
HC+F++P I + S+LLAK+RRNR IIPF +S++E+ N LM IS+EIPI+GI +
Sbjct: 505 GHCNFIYPAILHENSDLLAKRRRNRLIIPF--QSVQEQENGLMSHSGISIEIPINGIFRR 562
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+Y SSGI KY TIG HSI +KEDLIEYRG++EF PKYQ+KVDRFFFIP
Sbjct: 563 NSILAYFDDPRYTRNSSGITKYGTIGAHSIVKKEDLIEYRGVKEFNPKYQMKVDRFFFIP 622
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL ESSSIMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 623 EEVHILPESSSIMVRNNSIIGVDTRITLNTRSRVGGLVRV 662
[59][TOP]
>UniRef100_A6YAK9 RNA polymerase beta' subunit (Fragment) n=1 Tax=Itea virginica
RepID=A6YAK9_9MAGN
Length = 839
Score = 233 bits (595), Expect = 6e-60
Identities = 128/218 (58%), Positives = 156/218 (71%), Gaps = 26/218 (11%)
Frame = -2
Query: 577 LLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR----------------------LCPDHCH 464
L KDQDQ++ HSL ++ SN ++N+QVR +C DHC+
Sbjct: 42 LHKDQDQINLHSLSVERKYISNLSMTNDQVRHKLFSSYCSGKMIPDYSELTGIICTDHCN 101
Query: 463 FMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD----ISVEIPIDGIIHKNS 296
++P+I + +LL+K+RRNRFIIPF +SI+ER E P IS+EIPI GI +NS
Sbjct: 102 LIYPSILHENYDLLSKRRRNRFIIPF--KSIQEREKEQKPHSDSGISIEIPIKGIFRRNS 159
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQE 116
ILAYFDDP+YR +SSGI KY TI HSI +KEDLIEYRG++EFKPKYQ VDRFFFIP+E
Sbjct: 160 ILAYFDDPRYRRKSSGITKYGTIEAHSIVKKEDLIEYRGVKEFKPKYQ--VDRFFFIPEE 217
Query: 115 VHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
VHIL SSSIMVRNNSIIGV+T ITLNK+SRVGGLVRV
Sbjct: 218 VHILPVSSSIMVRNNSIIGVDTRITLNKRSRVGGLVRV 255
[60][TOP]
>UniRef100_A1XK10 RNA polymerase beta chain (Fragment) n=1 Tax=Buxus sempervirens
RepID=A1XK10_BUXSE
Length = 865
Score = 233 bits (595), Expect = 6e-60
Identities = 129/220 (58%), Positives = 155/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R SN +N+QVR +C
Sbjct: 45 SLHKDQDQMNVHSLSAERRYISNLSATNDQVRHKLFSSDPSGKRGGSILDYSGPNRIICN 104
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
H +F++PTI + S+LLAK+RRNRFI+P +S +ER ELMP IS+EIPI+GI +
Sbjct: 105 GHLNFIYPTILHENSDLLAKRRRNRFILPL--QSNQEREKELMPCSGISIEIPINGIFRR 162
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP YR +SSGI KY TI +HSI +KEDLIEYRG +EF+ KYQ+KVDRFFFIP
Sbjct: 163 NSILAYFDDPLYRRKSSGITKYGTIEVHSIVKKEDLIEYRGAKEFRSKYQMKVDRFFFIP 222
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SS IMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 223 EEVHILPGSSYIMVRNNSIIGVDTRITLNIRSRVGGLVRV 262
[61][TOP]
>UniRef100_A0A325 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Coffea arabica
RepID=RPOC2_COFAR
Length = 1391
Score = 233 bits (595), Expect = 6e-60
Identities = 124/218 (56%), Positives = 159/218 (72%), Gaps = 25/218 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+THSL +R T V+N++VR +C
Sbjct: 494 SLHKDQDQMNTHSLSVKRRYTYKLSVTNDRVRYKFFSSDFYGKKKNRIPDYLDLNRIICT 553
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISVEIPIDGIIHKNS 296
+C+ ++P I + S+LL+K+RRNRFI+P +SI+ER NE P IS+EIPI+GI +NS
Sbjct: 554 GYCNRIYPAILHENSDLLSKRRRNRFIMPL--QSIQERENE-SPGISIEIPINGIFRRNS 610
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQE 116
IL+YFDDP+YR +SSGI KY TI +HS+ +KEDLIEYRG++EF+PKYQ+KVDRFFFIP+E
Sbjct: 611 ILSYFDDPRYRRKSSGITKYGTIEMHSLVKKEDLIEYRGVKEFRPKYQMKVDRFFFIPEE 670
Query: 115 VHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
VHIL SSSIMV+NNSIIG++T ITLN +SRVGGLVRV
Sbjct: 671 VHILPGSSSIMVQNNSIIGIDTQITLNIRSRVGGLVRV 708
[62][TOP]
>UniRef100_A6MM26 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Buxus microphylla
RepID=RPOC2_BUXMI
Length = 1391
Score = 233 bits (595), Expect = 6e-60
Identities = 129/220 (58%), Positives = 155/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R SN +N+QVR +C
Sbjct: 494 SLHKDQDQMNVHSLSAERRYISNLSATNDQVRHKLFSSDPSGKRGGSILDYSGPNRIICN 553
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
H +F++PTI + S+LLAK+RRNRFI+P +S +ER ELMP IS+EIPI+GI +
Sbjct: 554 GHLNFIYPTILHENSDLLAKRRRNRFILPL--QSNQEREKELMPCSGISIEIPINGIFRR 611
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP YR +SSGI KY TI +HSI +KEDLIEYRG +EF+ KYQ+KVDRFFFIP
Sbjct: 612 NSILAYFDDPLYRRKSSGITKYGTIEVHSIVKKEDLIEYRGAKEFRSKYQMKVDRFFFIP 671
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SS IMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 672 EEVHILPGSSYIMVRNNSIIGVDTRITLNIRSRVGGLVRV 711
[63][TOP]
>UniRef100_A9XW65 DNA-directed RNA polymerase n=1 Tax=Cornus florida RepID=A9XW65_CORFO
Length = 1391
Score = 233 bits (593), Expect = 1e-59
Identities = 125/220 (56%), Positives = 154/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQD+M+ HSL +R SN V+N+Q R +C
Sbjct: 494 SLHKDQDKMNAHSLSVKRRYISNLSVTNDQARHKFFSSDFSGKQQDRIPDYSERNRIICT 553
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
HC+ +P I + S+LLAK+RRNRFIIP +SI+ER + +P IS+EIPI+GI +
Sbjct: 554 GHCNLTYPAIFHENSDLLAKRRRNRFIIPL--QSIQERKKKRIPRSGISIEIPINGIFRR 611
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR +SSGI KY TI HSI +KEDLIEYRG++EF+PKYQ+KVDRFFFIP
Sbjct: 612 NSILAYFDDPRYRRKSSGITKYGTIEAHSIVKKEDLIEYRGVKEFRPKYQMKVDRFFFIP 671
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSSIMVRNNS+IGV+T I N +SRVGGLVRV
Sbjct: 672 EEVHILPGSSSIMVRNNSLIGVDTQIAFNTRSRVGGLVRV 711
[64][TOP]
>UniRef100_A6YAL6 RNA polymerase beta' subunit (Fragment) n=1 Tax=Pterostemon
rotundifolius RepID=A6YAL6_9MAGN
Length = 811
Score = 232 bits (592), Expect = 1e-59
Identities = 124/218 (56%), Positives = 157/218 (72%), Gaps = 26/218 (11%)
Frame = -2
Query: 577 LLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR----------------------LCPDHCH 464
L KDQDQ++ HSL +++ SN ++N+QVR +C DHC+
Sbjct: 42 LHKDQDQLNIHSLSVERKHLSNLSMTNDQVRHKLFSSDRSGKKIPDYSELNRIICTDHCN 101
Query: 463 FMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD----ISVEIPIDGIIHKNS 296
++P I + +LL+K+RRNRFIIP +S +ER E M IS+EIPI+GI +NS
Sbjct: 102 LIYPAILHENYDLLSKRRRNRFIIPS--QSSQEREKEQMSHSDSGISIEIPINGIFRRNS 159
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQE 116
ILA FDDP+YR +SSGI KY TIG+ SI +KEDLIEYRG++EFKPKYQ++VDRFFFIP+E
Sbjct: 160 ILASFDDPRYRRKSSGITKYGTIGVQSIVKKEDLIEYRGVKEFKPKYQMQVDRFFFIPEE 219
Query: 115 VHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
VHIL SSSIMVRNNSIIGV+T ITLNK+SR+GGLVRV
Sbjct: 220 VHILPGSSSIMVRNNSIIGVDTRITLNKRSRIGGLVRV 257
[65][TOP]
>UniRef100_A9XW96 DNA-directed RNA polymerase (Fragment) n=1 Tax=Melianthus comosus
RepID=A9XW96_9ROSI
Length = 1267
Score = 232 bits (591), Expect = 2e-59
Identities = 124/222 (55%), Positives = 154/222 (69%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVRL--------------------------- 482
SL KDQDQM+ SL +R S+ V+ +QVR
Sbjct: 448 SLHKDQDQMNIPSLSVDRRYISSPSVNTDQVRYKFFRSDPYGKNKGRIPIPNYSEQKQIK 507
Query: 481 CPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGII 308
C DH + ++P I + L+AK+RRNRFI+PF +ER EL+P DIS+EIPI+GI
Sbjct: 508 CTDHLNLIYPVILHENFYLVAKRRRNRFIVPFQSIQEQEREKELLPRSDISIEIPINGIF 567
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+NSILAYFDDP+YR SSGI KY T+G+HSI +KEDLIEYRGI+EFKPKYQ+KVDRFFF
Sbjct: 568 RRNSILAYFDDPRYRRNSSGITKYGTLGVHSIIKKEDLIEYRGIKEFKPKYQMKVDRFFF 627
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHIL ESSSIM+RNNS+IGV+T +TLN +SRV GLVR+
Sbjct: 628 IPEEVHILPESSSIMIRNNSLIGVDTQLTLNTRSRVSGLVRM 669
[66][TOP]
>UniRef100_A9XW89 DNA-directed RNA polymerase (Fragment) n=1 Tax=Juglans nigra
RepID=A9XW89_JUGNI
Length = 1268
Score = 231 bits (590), Expect = 2e-59
Identities = 124/221 (56%), Positives = 157/221 (71%), Gaps = 28/221 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------------------LC 479
SL KDQD+++ +SL KR+ S+ N+QVR +C
Sbjct: 459 SLQKDQDKINVNSLSVEKRSISSLSGDNDQVRQKFFSSDLFEKKKESGIPDYSKLNRIIC 518
Query: 478 PDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIH 305
H + ++P I +LLAK+++N FIIPF +SI+ER ELMP IS+EIP++GI
Sbjct: 519 TGHFNLIYPAILYKNYDLLAKRQKNXFIIPF--QSIQEREKELMPPSGISIEIPVNGIFR 576
Query: 304 KNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFI 125
KNSILAYFDDPQYR ++SGI KY TIG+HSI +KEDLIEYRG++EFKPKYQ+K+DRFFFI
Sbjct: 577 KNSILAYFDDPQYRKKNSGITKYGTIGVHSILKKEDLIEYRGVKEFKPKYQMKIDRFFFI 636
Query: 124 PQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
P+EVHIL ESSSIMV+NNS+IGV+T ITLN +SR GGLVRV
Sbjct: 637 PEEVHILPESSSIMVQNNSLIGVDTRITLNIRSRAGGLVRV 677
[67][TOP]
>UniRef100_A9XWB5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Spiraea tomentosa
RepID=A9XWB5_9ROSA
Length = 1264
Score = 231 bits (589), Expect = 3e-59
Identities = 128/218 (58%), Positives = 156/218 (71%), Gaps = 25/218 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR------------LCPDHC---------H 464
SL KDQDQ + HSL R S+ V+N+QV+ PD+ H
Sbjct: 460 SLHKDQDQTNVHSLSAEGRYISSLSVNNDQVKHKSLNLSGKKESSIPDYSEFNRIIYTGH 519
Query: 463 FMHPTISPDTSN--LLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHKNS 296
+ P I D S+ LL K+RRNRFIIPF +SI+ER +LMP IS+EIPI+GI +NS
Sbjct: 520 LIFPAILHDNSDFFLLTKRRRNRFIIPF--QSIQEREKDLMPSPGISIEIPINGIFRRNS 577
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQE 116
ILAYFDDPQYR +SSGI KY T+G+HSI +KE LIEYRG++EFKPKYQ+KVDRFFFIP+E
Sbjct: 578 ILAYFDDPQYRRKSSGITKYGTVGLHSILKKEGLIEYRGVKEFKPKYQMKVDRFFFIPEE 637
Query: 115 VHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
VHI ESS+IMVRNNSIIG++T ITLN +SRVGGLVR+
Sbjct: 638 VHIFPESSAIMVRNNSIIGIDTRITLNTRSRVGGLVRM 675
[68][TOP]
>UniRef100_A6YAK4 RNA polymerase beta' subunit (Fragment) n=1 Tax=Daphniphyllum sp.
205-82 RepID=A6YAK4_9MAGN
Length = 793
Score = 231 bits (589), Expect = 3e-59
Identities = 128/222 (57%), Positives = 155/222 (69%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------LCPD---------- 473
SL KDQDQM+ HSL +R SN V+++QVR PD
Sbjct: 29 SLHKDQDQMNVHSLSVERRYISNLSVTDDQVRHKLFSSYLSGKKEGRIPDYSELNRIIGT 88
Query: 472 -HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD----ISVEIPIDGII 308
HC+ ++P I P+ S+LLAK+RRNRFIIPF +SI+ER E MP I +EIPI+GI
Sbjct: 89 SHCNLIYPAILPENSDLLAKRRRNRFIIPF--QSIQEREKEQMPHSDSGILIEIPINGIF 146
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
NSILAYFDDP+YR S G+ KY TI +HSI +KED IEYRG++EFKP+YQ+KVDRFFF
Sbjct: 147 RINSILAYFDDPRYRRNSLGLTKYGTIEVHSIVKKEDFIEYRGVKEFKPRYQMKVDRFFF 206
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHIL S SIMVRNNSIIGV+T ITLN +S+VGGLVRV
Sbjct: 207 IPEEVHILPGSCSIMVRNNSIIGVDTLITLNTRSQVGGLVRV 248
[69][TOP]
>UniRef100_A9XW77 DNA-directed RNA polymerase (Fragment) n=1 Tax=Guaiacum officinale
RepID=A9XW77_9ROSI
Length = 1110
Score = 231 bits (588), Expect = 4e-59
Identities = 127/221 (57%), Positives = 159/221 (71%), Gaps = 28/221 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------LCP----------- 476
SL KDQDQMS +S +++ SN ++N+QVR L P
Sbjct: 459 SLHKDQDQMSLNSSSVEEKDLSNLSLNNDQVRRQLLSSDFFGKKKTLLPYSSVLNPSIGI 518
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNEL-MPD--ISVEIPIDGIIH 305
HC F++P I + S+LLAK+RRNRF+IPF F E+NNEL MP IS+EIP +GI H
Sbjct: 519 GHCDFIYPAILQENSDLLAKRRRNRFLIPFQFSP--EQNNELRMPRSRISIEIPPNGIFH 576
Query: 304 KNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFI 125
+NSI+AY DDPQYR +SSGI KY+TIG HSI +KED IEY+G++EF+PKYQ+KVDRFFFI
Sbjct: 577 RNSIIAYLDDPQYRRKSSGITKYRTIGAHSIAKKEDWIEYKGVKEFQPKYQMKVDRFFFI 636
Query: 124 PQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
P+EVHIL ESS IMVR+NS+IGV+T ITLN +SR+GGLVRV
Sbjct: 637 PEEVHILPESSPIMVRDNSLIGVDTQITLNTRSRMGGLVRV 677
[70][TOP]
>UniRef100_B5LMM6 DNA-directed RNA polymerase n=1 Tax=Cicer arietinum
RepID=B5LMM6_CICAR
Length = 1376
Score = 230 bits (587), Expect = 5e-59
Identities = 116/186 (62%), Positives = 147/186 (79%), Gaps = 2/186 (1%)
Frame = -2
Query: 553 STHSLPTAKRNTSNFLVSNNQVRLCPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRS 374
S + T +R +++ + N + C D+ H M+ I + LLAK+RRNRF+IPF +
Sbjct: 527 SFETFGTKERGITDYSIFNQII--CTDYSHLMYSAIFNNIFYLLAKRRRNRFVIPFQW-- 582
Query: 373 IRERNNELMPD--ISVEIPIDGIIHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKE 200
I+E+ N+LM +S+EIPI+GI H+NSILAYFDDPQYR Q+SGI KY+TIGIHS+FQKE
Sbjct: 583 IQEQKNKLMSPSGVSIEIPINGIFHRNSILAYFDDPQYRRQNSGITKYRTIGIHSLFQKE 642
Query: 199 DLIEYRGIREFKPKYQIKVDRFFFIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRV 20
DLIEYRGI+E KPKYQ KVDRFFFIP+EVHIL ESSSIM+RNNS++G+ TPITLN +SRV
Sbjct: 643 DLIEYRGIKELKPKYQNKVDRFFFIPEEVHILPESSSIMIRNNSLVGIGTPITLNIRSRV 702
Query: 19 GGLVRV 2
GGLVR+
Sbjct: 703 GGLVRL 708
[71][TOP]
>UniRef100_A1XKA9 RNA polymerase beta chain (Fragment) n=1 Tax=Guaiacum officinale
RepID=A1XKA9_9ROSI
Length = 879
Score = 230 bits (587), Expect = 5e-59
Identities = 127/221 (57%), Positives = 160/221 (72%), Gaps = 28/221 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------LCP----------- 476
SL KDQDQMS +S +++ SN ++N+QVR L P
Sbjct: 45 SLHKDQDQMSLNSSSVEEKDLSNLSLNNDQVRRQLLSSDFFGKKKTLLPYSSVLNPSIGI 104
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNEL-MPD--ISVEIPIDGIIH 305
HC F++P I + S+LLAK+RRNRF+IPF +S E+NNEL MP IS+EIP +GI H
Sbjct: 105 GHCDFIYPAILQENSDLLAKRRRNRFLIPF--QSSPEQNNELRMPRSRISIEIPPNGIFH 162
Query: 304 KNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFI 125
+NSI+AY DDPQYR +SSGI KY+TIG HSI +KED IEY+G++EF+PKYQ+KVDRFFFI
Sbjct: 163 RNSIIAYLDDPQYRRKSSGITKYRTIGAHSIAKKEDWIEYKGVKEFQPKYQMKVDRFFFI 222
Query: 124 PQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
P+EVHIL ESS IMVR+NS+IGV+T ITLN +SR+GGLVRV
Sbjct: 223 PEEVHILPESSPIMVRDNSLIGVDTQITLNTRSRMGGLVRV 263
[72][TOP]
>UniRef100_A1XK48 RNA polymerase beta chain (Fragment) n=1 Tax=Camellia japonica
RepID=A1XK48_9ERIC
Length = 863
Score = 230 bits (587), Expect = 5e-59
Identities = 126/220 (57%), Positives = 154/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQ + HSL + SN ++N+QVR +C
Sbjct: 45 SLHKDQDQTNAHSLSVKRIYISNPSLTNDQVRHKFFSSDFSGKKKDRIPDYSELNRIVCT 104
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
H + ++P+I D S+LLAK+RRNRFIIP SI+ER ELMP IS+EIPI+GI +
Sbjct: 105 GHYNLIYPSILHDNSDLLAKRRRNRFIIPL--HSIQEREKELMPPSGISIEIPINGIFRR 162
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
SILAYFDDP+YR + SGI KY TI +HS +KEDLIEYRG++EF+PKYQ+KVDRFFFIP
Sbjct: 163 KSILAYFDDPRYRRKRSGITKYGTIDVHSFVKKEDLIEYRGVKEFRPKYQMKVDRFFFIP 222
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVH+L SSSIMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 223 EEVHLLPGSSSIMVRNNSIIGVDTQITLNTRSRVGGLVRV 262
[73][TOP]
>UniRef100_A1XK42 RNA polymerase beta chain (Fragment) n=1 Tax=Magnolia tripetala
RepID=A1XK42_MAGTR
Length = 859
Score = 230 bits (586), Expect = 7e-59
Identities = 127/220 (57%), Positives = 155/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R S+ V+N++VR +
Sbjct: 45 SLHKDQDQMNVHSLSVERRYISDLSVTNDRVRHKLFSSDPSSKKGKGILDYSGPDRIISN 104
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
H +F++P I + S+LLAK+RRNRFIIPF + +ER ELMP IS+EIPI+GI+ +
Sbjct: 105 GHWNFLYPAILHENSDLLAKRRRNRFIIPFQYD--QEREKELMPRSGISIEIPINGILRR 162
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR SSGI KY TI + SI +KEDLIEYRG +EF+PKYQ+KVDRFFFIP
Sbjct: 163 NSILAYFDDPRYRRSSSGITKYGTIEVDSIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIP 222
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSSIMVRNNSIIGV+T I LN +SRVGGLVRV
Sbjct: 223 EEVHILPGSSSIMVRNNSIIGVDTRIALNTRSRVGGLVRV 262
[74][TOP]
>UniRef100_C0LE64 DNA-directed RNA polymerase n=1 Tax=Jatropha curcas
RepID=C0LE64_9ROSI
Length = 1394
Score = 229 bits (585), Expect = 9e-59
Identities = 125/225 (55%), Positives = 157/225 (69%), Gaps = 32/225 (14%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HS+ +R S+ V+N+QV+ +C
Sbjct: 494 SLHKDQDQMNVHSISVKRRYISSLSVNNDQVKHKFISSDFSGKKESKIPDYSELNRIICT 553
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
HC+ ++ I + S+LLAK+RRN+FIIPF +SI+ER ELM IS+EIP +GI +
Sbjct: 554 GHCNLIYSAILYENSDLLAKRRRNKFIIPF--QSIQEREKELMTHSAISIEIPRNGIFRR 611
Query: 301 NSILAYFDDPQYRTQSSGIAK-----YKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDR 137
NS+ AYFDDPQYR +SSGI K Y TIG+HSI +KEDLIEYRG++EFKPKYQ+KVDR
Sbjct: 612 NSVFAYFDDPQYRRKSSGITKSGITKYGTIGVHSIVKKEDLIEYRGVKEFKPKYQMKVDR 671
Query: 136 FFFIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
FFFIP+EV+I ESSS+MVRNNSIIGV+T I LN +SRVGGLVRV
Sbjct: 672 FFFIPEEVYIFPESSSLMVRNNSIIGVDTQIALNTRSRVGGLVRV 716
[75][TOP]
>UniRef100_A1XKD9 RNA polymerase beta chain (Fragment) n=1 Tax=Nothofagus moorei
RepID=A1XKD9_9ROSI
Length = 777
Score = 229 bits (585), Expect = 9e-59
Identities = 122/194 (62%), Positives = 148/194 (76%), Gaps = 5/194 (2%)
Frame = -2
Query: 568 DQDQMSTHSLPT--AKRNTSNFLVSNNQVRLCPDHCHFMHPTISPDTSNLLAKKRRNRFI 395
DQDQ++ HSL K+ F S +C HC+ ++P I S LLAK+RRN+FI
Sbjct: 1 DQDQINVHSLSDLFGKKENGIFDYSELNRIICTGHCNLIYPPIIHANSYLLAKRRRNKFI 60
Query: 394 IPFLFRSIRERNNELMP--DISVEIPI-DGIIHKNSILAYFDDPQYRTQSSGIAKYKTIG 224
IPF +SI+ER+ ELMP IS+EIPI +GI H+NSILAYFDDPQYR ++SGI KY T+
Sbjct: 61 IPF--QSIQERDKELMPYFGISIEIPIINGIFHRNSILAYFDDPQYRRKNSGITKYGTVE 118
Query: 223 IHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEVHILSESSSIMVRNNSIIGVNTPI 44
+HSI +KEDLIEYRG +E KPKYQ+KVDRFFFIP+EVHIL ESSSIMV+NNS+IGVNT I
Sbjct: 119 VHSILKKEDLIEYRGAKELKPKYQMKVDRFFFIPEEVHILPESSSIMVQNNSLIGVNTRI 178
Query: 43 TLNKKSRVGGLVRV 2
LN +SR GGLVRV
Sbjct: 179 ALNTRSRAGGLVRV 192
[76][TOP]
>UniRef100_A1XK66 RNA polymerase beta chain (Fragment) n=1 Tax=Calycanthus floridus
RepID=A1XK66_CALFL
Length = 861
Score = 229 bits (585), Expect = 9e-59
Identities = 129/220 (58%), Positives = 155/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------LCPD---------- 473
SL KDQDQM+ HSL +R S+ V+N +VR PD
Sbjct: 45 SLHKDQDQMNVHSLSVEQRYISDLSVTNVRVRHKLFSSDSSGKKGGRAPDYSGPDRIISN 104
Query: 472 -HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
H +F++P I + S+LLAK+RRNRFIIPF +S +ER ELMP IS+EIPI+GI+ +
Sbjct: 105 GHWNFIYPAILHENSDLLAKRRRNRFIIPF--QSDQEREKELMPRSGISIEIPINGILRR 162
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR SSGI KY TIG+ SI +KEDLIEYR +EF+PKYQ+KVDRFFFIP
Sbjct: 163 NSILAYFDDPRYRRSSSGITKYGTIGVDSIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIP 222
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SS +MVRNNSIIGVNT I LN +SRVGGLVRV
Sbjct: 223 EEVHILPASSPVMVRNNSIIGVNTRIALNTRSRVGGLVRV 262
[77][TOP]
>UniRef100_Q68S16 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Panax ginseng
RepID=RPOC2_PANGI
Length = 1387
Score = 229 bits (585), Expect = 9e-59
Identities = 128/217 (58%), Positives = 152/217 (70%), Gaps = 24/217 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR---LCPD-------------------HC 467
S+ KDQDQM+ HSL +R SN V+N+Q R D HC
Sbjct: 494 SIHKDQDQMNAHSLSVKRRYISNLSVTNDQARHKFFSSDFSGKKEDRITDYSELNRIGHC 553
Query: 466 HFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHKNSI 293
+ + I S+LLAK+RRNRFIIP +SI+E NELMP IS+EIPI GI K SI
Sbjct: 554 NLPYLAILHANSDLLAKRRRNRFIIPL--QSIQEHENELMPSSGISIEIPIHGIFRKKSI 611
Query: 292 LAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEV 113
+AYFDDP+YR +SSGI KY TI +HSI +KEDLIEYRG++EF+PKYQ+KVDRFFFIP+EV
Sbjct: 612 IAYFDDPRYRRKSSGITKYGTIEVHSIVKKEDLIEYRGVKEFRPKYQMKVDRFFFIPEEV 671
Query: 112 HILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
HIL SSSIMVRNNSIIGV+T ITL +SRVGGLVRV
Sbjct: 672 HILPGSSSIMVRNNSIIGVDTQITLTTRSRVGGLVRV 708
[78][TOP]
>UniRef100_Q7YJY0 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Calycanthus
floridus var. glaucus RepID=RPOC2_CALFG
Length = 1377
Score = 229 bits (585), Expect = 9e-59
Identities = 129/220 (58%), Positives = 155/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------LCPD---------- 473
SL KDQDQM+ HSL +R S+ V+N +VR PD
Sbjct: 495 SLHKDQDQMNVHSLSVEQRYISDLSVTNVRVRHKLFSSDSSGKKGGRAPDYSGPDRIISN 554
Query: 472 -HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
H +F++P I + S+LLAK+RRNRFIIPF +S +ER ELMP IS+EIPI+GI+ +
Sbjct: 555 GHWNFIYPAILHENSDLLAKRRRNRFIIPF--QSDQEREKELMPRSGISIEIPINGILRR 612
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR SSGI KY TIG+ SI +KEDLIEYR +EF+PKYQ+KVDRFFFIP
Sbjct: 613 NSILAYFDDPRYRRSSSGITKYGTIGVDSIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIP 672
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SS +MVRNNSIIGVNT I LN +SRVGGLVRV
Sbjct: 673 EEVHILPASSPVMVRNNSIIGVNTRIALNTRSRVGGLVRV 712
[79][TOP]
>UniRef100_Q8S8Y1 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Atropa belladonna
RepID=RPOC2_ATRBE
Length = 1389
Score = 229 bits (585), Expect = 9e-59
Identities = 124/220 (56%), Positives = 155/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
S+ KDQDQM+ HSL +R TSN V+N+Q R +C
Sbjct: 494 SIHKDQDQMNAHSLSGKQRYTSNLSVTNDQARQKLFSSGFSGKKEDRIPDYSDLNRIICT 553
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
+ ++ I + S+LL+K+RRN+FIIP SI+E NELMP IS+EIP++GI +
Sbjct: 554 GQYNLVYSPILHENSDLLSKRRRNKFIIPL--HSIQELENELMPCSGISIEIPVNGIFRR 611
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR +SSGI KY TI HS+ +KEDLIEYRG++EF+PKYQ+KVDRFFFIP
Sbjct: 612 NSILAYFDDPRYRRKSSGIIKYGTIETHSVIKKEDLIEYRGVKEFRPKYQMKVDRFFFIP 671
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSSIMVRNNSI+GV+T ITLN +SRVGGLVRV
Sbjct: 672 EEVHILPGSSSIMVRNNSIVGVDTQITLNLRSRVGGLVRV 711
[80][TOP]
>UniRef100_A1XK34 RNA polymerase beta chain (Fragment) n=1 Tax=Hedyosmum arborescens
RepID=A1XK34_9MAGN
Length = 869
Score = 229 bits (584), Expect = 1e-58
Identities = 129/223 (57%), Positives = 156/223 (69%), Gaps = 30/223 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------------LCPD---- 473
SL KDQDQM+ HSL +R+ S+ V+N++VR PD
Sbjct: 45 SLHKDQDQMNAHSLSVERRSISDLSVTNDRVRHKLFSSDLSGKKRGGILDYSAGPDRIIS 104
Query: 472 ----HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGI 311
H +F++P I + S+LL K+RRNRFIIPF + +ER ELMP IS+EIPI+GI
Sbjct: 105 NGRGHWNFVNPAILHENSDLLTKRRRNRFIIPFQY--YQEREKELMPRSGISIEIPINGI 162
Query: 310 IHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFF 131
+ + SILAYFDDP+YR SSGI KY TI + SI +KEDLIEYRG +EF+PKYQIKVDRFF
Sbjct: 163 LRRKSILAYFDDPRYRRSSSGITKYGTIEVDSIIKKEDLIEYRGTKEFRPKYQIKVDRFF 222
Query: 130 FIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
FIP+EVHIL SSSIMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 223 FIPEEVHILPGSSSIMVRNNSIIGVDTRITLNTRSRVGGLVRV 265
[81][TOP]
>UniRef100_Q2VEI6 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Solanum tuberosum
RepID=RPOC2_SOLTU
Length = 1392
Score = 229 bits (583), Expect = 2e-58
Identities = 124/220 (56%), Positives = 154/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
S+ KDQDQM+ HSL +R TSN V+N+Q R +C
Sbjct: 494 SIHKDQDQMNAHSLSGKRRYTSNLSVTNDQARQKLFSSDFYGQKEDRIPDYSDLNRIICT 553
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
+ ++ I S+LL+K+RRN+FIIP SI+E NELMP IS+EIP++GI +
Sbjct: 554 GQYNLVYSPILHGNSDLLSKRRRNKFIIPL--HSIQELENELMPCSGISIEIPVNGIFRR 611
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR +SSGI KY TI HS+ +KEDLIEYRG++EF+PKYQ+KVDRFFFIP
Sbjct: 612 NSILAYFDDPRYRRKSSGIIKYGTIETHSVIKKEDLIEYRGVKEFRPKYQMKVDRFFFIP 671
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSSIMVRNNSI+GV+T ITLN +SRVGGLVRV
Sbjct: 672 EEVHILPGSSSIMVRNNSIVGVDTQITLNLRSRVGGLVRV 711
[82][TOP]
>UniRef100_A6YAL8 RNA polymerase beta' subunit (Fragment) n=1 Tax=Ribes americanum
RepID=A6YAL8_RIBAM
Length = 808
Score = 228 bits (582), Expect = 2e-58
Identities = 126/221 (57%), Positives = 155/221 (70%), Gaps = 28/221 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR------------------------LCPD 473
SL KDQDQ++ HSL +++ SN V+N QVR + D
Sbjct: 41 SLHKDQDQLNVHSLSVERKSISNLSVTNEQVRHKLSSSDRSGKKIPNYSELNRNRIIGID 100
Query: 472 HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELM----PDISVEIPIDGIIH 305
HC+ ++P I + +LL+K+RRNRFIIPF +SI+ER E M I +EIP +GI
Sbjct: 101 HCNLIYPAILHENYDLLSKRRRNRFIIPF--QSIQEREKEQMRHSDSGILIEIPRNGIFR 158
Query: 304 KNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFI 125
KNSILAYFDDP+YR SSGI KY TI +HSI +KEDLIEYRG +EFKP+YQ++VD+FFFI
Sbjct: 159 KNSILAYFDDPRYRRNSSGITKYGTIEVHSIVKKEDLIEYRGGKEFKPRYQMQVDQFFFI 218
Query: 124 PQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
P+EVHIL SSSIMVRNNSIIGV+T ITLNK+SRVGGLVRV
Sbjct: 219 PEEVHILPGSSSIMVRNNSIIGVSTRITLNKRSRVGGLVRV 259
[83][TOP]
>UniRef100_A1XK37 RNA polymerase beta chain (Fragment) n=1 Tax=Drimys winteri
RepID=A1XK37_DRIWI
Length = 840
Score = 228 bits (581), Expect = 3e-58
Identities = 125/220 (56%), Positives = 154/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R +S+ V+N++ R +
Sbjct: 21 SLHKDQDQMNIHSLSVEQRESSDLSVTNDRARHKLFSSDPSGKKEGKILDYSGPARIISN 80
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
H +F++P I + S LLAK+RRNRFIIPF + +ER ELMP IS+EIPI+GI+ +
Sbjct: 81 GHWNFIYPAILHENSYLLAKRRRNRFIIPFQYD--QEREKELMPRSGISIEIPINGILRR 138
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR SSGI KY T+ + SI +KEDLIEYRG +EF PKYQ+KVDRFFFIP
Sbjct: 139 NSILAYFDDPRYRRSSSGITKYGTVEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIP 198
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSSIMVRNNSIIGV+T ITLN +SR+GGLVRV
Sbjct: 199 EEVHILPGSSSIMVRNNSIIGVDTRITLNTRSRIGGLVRV 238
[84][TOP]
>UniRef100_Q06H07 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Drimys granadensis
RepID=RPOC2_DRIGR
Length = 1381
Score = 228 bits (581), Expect = 3e-58
Identities = 125/220 (56%), Positives = 154/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R +S+ V+N++ R +
Sbjct: 495 SLHKDQDQMNIHSLSVEQRESSDLSVTNDRARHKLFSSDPSGKKEGKILDYSGPARIISN 554
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
H +F++P I + S LLAK+RRNRFIIPF + +ER ELMP IS+EIPI+GI+ +
Sbjct: 555 GHWNFIYPAILHENSYLLAKRRRNRFIIPFQYD--QEREKELMPRSGISIEIPINGILRR 612
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR SSGI KY T+ + SI +KEDLIEYRG +EF PKYQ+KVDRFFFIP
Sbjct: 613 NSILAYFDDPRYRRSSSGITKYGTVEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIP 672
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSSIMVRNNSIIGV+T ITLN +SR+GGLVRV
Sbjct: 673 EEVHILPGSSSIMVRNNSIIGVDTRITLNTRSRIGGLVRV 712
[85][TOP]
>UniRef100_B5AGZ9 DNA-directed RNA polymerase n=1 Tax=Gonystylus bancanus
RepID=B5AGZ9_9ROSI
Length = 1370
Score = 228 bits (580), Expect = 3e-58
Identities = 127/224 (56%), Positives = 157/224 (70%), Gaps = 31/224 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQ++ HS+ +R S+ V+N+Q R +
Sbjct: 490 SLHKDQDQINIHSISAERRYISSLSVNNDQERHKFFSSDFFDKKEGRISDYSELNRIVGT 549
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD----ISVEIPIDGII 308
H HF++ T+ + S LLAK+RRNRFIIP +SI+E+ ELMP IS+EIPI+GI
Sbjct: 550 GHYHFIYSTLLRENSYLLAKRRRNRFIIPV--QSIQEQEKELMPHSGSGISIEIPINGIF 607
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+NSILA+FDDPQYR SSGI KY T+G HSI +KED+IEY G+++FKPKYQ+KVDRFFF
Sbjct: 608 RRNSILAFFDDPQYRRNSSGITKYGTVGAHSIIKKEDVIEYGGVKKFKPKYQMKVDRFFF 667
Query: 127 IPQEVHILSESSSI--MVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHILSESSSI MVRNNSIIGVNT ITLN +S+VGGLVRV
Sbjct: 668 IPEEVHILSESSSIIRMVRNNSIIGVNTQITLNTRSQVGGLVRV 711
[86][TOP]
>UniRef100_A9XW74 DNA-directed RNA polymerase n=1 Tax=Euonymus americanus
RepID=A9XW74_9ROSI
Length = 1395
Score = 228 bits (580), Expect = 3e-58
Identities = 125/220 (56%), Positives = 154/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
S+ KDQDQ+ + S+ R S+F +N+QVR +C
Sbjct: 494 SIHKDQDQVHSLSVSAEGRYISSFSGNNDQVRSRFFSSDLSGKNQSKITEYSEHNRIICT 553
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
HC+ ++P I ++ +LLAK+RRNRFIIPF +SI ER ELM DIS+EIPI+GI +
Sbjct: 554 GHCNLIYPPILHESYDLLAKRRRNRFIIPF--QSIPEREKELMSPADISIEIPINGIFRR 611
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
SI AYFDD QYR SSGI KY TIG+HSI +KEDLIEYRG++EFKPKY++K+DRFFFIP
Sbjct: 612 KSIFAYFDDLQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKEFKPKYKMKIDRFFFIP 671
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL ESSSIMVRNNSII V+T I LN +SRVGGLVRV
Sbjct: 672 EEVHILPESSSIMVRNNSIIRVDTRIALNTRSRVGGLVRV 711
[87][TOP]
>UniRef100_A9XW64 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coriaria nepalensis
RepID=A9XW64_9ROSI
Length = 1283
Score = 228 bits (580), Expect = 3e-58
Identities = 122/220 (55%), Positives = 153/220 (69%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQ++ HSL R S+ V+N+QVR +C
Sbjct: 465 SLYKDQDQINVHSLSVEGRYISSLSVNNDQVRHKFFSSDSSGKKESGIPDYSELNRIICT 524
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
HC+ ++P+I S L AK+RRNRFII F S++ER EL+P IS+EIPI+ I +
Sbjct: 525 GHCNLIYPSIFHGNSYLFAKRRRNRFIIQF--ESLQEREKELLPRSSISIEIPINHIFRR 582
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
N+ILAYFDDPQYR + SGI KY TIG+H + +KED IEYRG+ EFKPKY+++VDRFFFIP
Sbjct: 583 NTILAYFDDPQYRRKGSGITKYGTIGVHPVLKKEDFIEYRGVTEFKPKYKMEVDRFFFIP 642
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL ESSSIMVRNNSIIGV+T ITL+ +S+VGGLVRV
Sbjct: 643 EEVHILPESSSIMVRNNSIIGVDTRITLSIRSQVGGLVRV 682
[88][TOP]
>UniRef100_A9XW53 DNA-directed RNA polymerase (Fragment) n=1 Tax=Bursera simaruba
RepID=A9XW53_9ROSI
Length = 1274
Score = 228 bits (580), Expect = 3e-58
Identities = 125/220 (56%), Positives = 155/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVRL--------------CPD---------- 473
S+ KDQDQM+ HSL + S+ V+N+QVR PD
Sbjct: 463 SIHKDQDQMNIHSLSVERNYISSLSVNNDQVRHKLLSSDFSDKKEGGIPDYSGFNRIIGT 522
Query: 472 -HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
HC+ +HP I S+LLAK+RRNRF+IPF +SI+E+ ELMP IS+EIPI GI +
Sbjct: 523 GHCNCIHPAILDKNSDLLAKRRRNRFLIPF--QSIQEQEKELMPPSGISIEIPIKGIFRR 580
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR +SSGI KY TIG HSI +KEDLIEYRG+++ KPK+Q K+D FFFIP
Sbjct: 581 NSILAYFDDPRYRRKSSGITKYGTIGAHSIVKKEDLIEYRGVKKIKPKHQTKIDHFFFIP 640
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EV+ L ESSS+MVRNNSIIGV+T ITLN +S+VGGLVRV
Sbjct: 641 EEVYTLPESSSVMVRNNSIIGVDTRITLNIRSQVGGLVRV 680
[89][TOP]
>UniRef100_Q2MIJ7 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Solanum
bulbocastanum RepID=RPOC2_SOLBU
Length = 1392
Score = 228 bits (580), Expect = 3e-58
Identities = 124/220 (56%), Positives = 153/220 (69%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
S+ KDQDQM+ HSL R TSN V+N+Q R +C
Sbjct: 494 SIHKDQDQMNAHSLSGKPRYTSNLSVTNDQARQKLFSSDFYGQKEDRIPDYSDLNRIICT 553
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
+ ++ I S+LL+K+RRN+FIIP SI+E NELMP IS+EIP++GI +
Sbjct: 554 GQYNLVYSPILHGNSDLLSKRRRNKFIIPL--HSIQELENELMPCSGISIEIPVNGIFRR 611
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR +SSGI KY TI HS+ +KEDLIEYRG++EF+PKYQ+KVDRFFFIP
Sbjct: 612 NSILAYFDDPRYRRKSSGIIKYGTIETHSVIKKEDLIEYRGVKEFRPKYQMKVDRFFFIP 671
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSSIMVRNNSI+GV+T ITLN +SRVGGLVRV
Sbjct: 672 EEVHILPGSSSIMVRNNSIVGVDTQITLNLRSRVGGLVRV 711
[90][TOP]
>UniRef100_Q2L8Z5 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Gossypium hirsutum
RepID=RPOC2_GOSHI
Length = 1393
Score = 228 bits (580), Expect = 3e-58
Identities = 124/222 (55%), Positives = 157/222 (70%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQ+S H L +R S F V+N+QVR +
Sbjct: 490 SLHKDQDQISIHYLSAERRYISRFSVNNDQVRHNLFSSDFSDKKEERIYDYSELNRIIGT 549
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELM----PDISVEIPIDGII 308
HC F++ I + ++LLAK+RRNRFIIPF + I+++ ELM IS+EIPI+GI
Sbjct: 550 GHCDFIYSAILHENADLLAKRRRNRFIIPF--QLIQDQEKELMLHSHSGISMEIPINGIF 607
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+ SILA+FDDP+YR +SSGI KY T+G HSI ++ED+IEYRG+++ KPKYQ+KVDRFFF
Sbjct: 608 RRKSILAFFDDPRYRRKSSGITKYGTLGAHSIVKREDVIEYRGVKKVKPKYQMKVDRFFF 667
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHILSESSSIMVRNNSIIGV+TPITLN +S+VGGLVRV
Sbjct: 668 IPEEVHILSESSSIMVRNNSIIGVDTPITLNTRSQVGGLVRV 709
[91][TOP]
>UniRef100_A9XWA4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phyllanthus calycinus
RepID=A9XWA4_PHYCY
Length = 1271
Score = 227 bits (579), Expect = 4e-58
Identities = 124/220 (56%), Positives = 154/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQ++ HSL K SN V+ ++V+ +C
Sbjct: 459 SLHKDQDQINVHSLSIKKGYISNPSVNKDRVKHKFFSSELLGKKESRNLDYSELNRTICT 518
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
HC+ ++P + + S+LLAK+RRNR IIPF +SI+ER ELMP IS+EIPI+GI K
Sbjct: 519 VHCNLIYPAMLHENSDLLAKRRRNRLIIPF--QSIQEREKELMPRSGISIEIPINGIFRK 576
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILA+FDDP+YR SSGI KY IG+HSI +KEDLIEYRG++EFK KYQ KVD FFFIP
Sbjct: 577 NSILAFFDDPKYRRNSSGITKYGVIGVHSIVKKEDLIEYRGVKEFKTKYQTKVDCFFFIP 636
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EV+IL ESS +MVRNNSIIGV+T ITLN +SRVGGL+RV
Sbjct: 637 EEVYILPESSLLMVRNNSIIGVDTQITLNTRSRVGGLIRV 676
[92][TOP]
>UniRef100_A9XW57 DNA-directed RNA polymerase (Fragment) n=1 Tax=Carica papaya
RepID=A9XW57_CARPA
Length = 1163
Score = 227 bits (579), Expect = 4e-58
Identities = 126/220 (57%), Positives = 157/220 (71%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL + + S+ V+N+Q R L
Sbjct: 464 SLHKDQDQMNIHSLSVEQESISSLAVNNDQGRHKFFSSNFSDKKKCGIPDYSEFHRILDT 523
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
HC+ ++ + S+LLAK+RRNRFIIPF +SI+E+ ELMP IS+EIPI+GI +
Sbjct: 524 GHCNLIYFASLHENSDLLAKRRRNRFIIPF--QSIQEQEKELMPRSGISIEIPINGIFRR 581
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILA+FDDP+YR +SSGI KY TIG HSI +KED+IEYRG+++FK KYQ+KVDRFFFIP
Sbjct: 582 NSILAFFDDPRYRRKSSGILKYGTIGAHSIVKKEDVIEYRGVKKFKTKYQMKVDRFFFIP 641
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL ESSSIMVRNNSIIGV+T ITLN +S+VGGLVRV
Sbjct: 642 EEVHILPESSSIMVRNNSIIGVDTRITLNIRSQVGGLVRV 681
[93][TOP]
>UniRef100_A1XKD0 RNA polymerase beta chain (Fragment) n=1 Tax=Oxalis sp. Qiu 94028
RepID=A1XKD0_9ROSI
Length = 827
Score = 227 bits (579), Expect = 4e-58
Identities = 123/220 (55%), Positives = 151/220 (68%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HS +R S ++N+QVR LC
Sbjct: 45 SLHKDQDQMNVHSSSVERRCNSRLSINNDQVRHKFFSSNLFGKKESRIPHYSELNRVLCI 104
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
HC+ + P + + S L+AK+RRN+FIIP +SI+E EL P DIS+EIPI GI +
Sbjct: 105 GHCNLIDPALLHENSYLMAKRRRNKFIIPL--QSIQEHEKELKPRSDISIEIPISGIFRR 162
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSI +YFDDPQYR +SSGI KY TIG+HSI +KEDLIEYRG++EFK KYQ KVD+F FIP
Sbjct: 163 NSIFSYFDDPQYRRRSSGITKYGTIGVHSIVKKEDLIEYRGVKEFKQKYQKKVDQFCFIP 222
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EV+I ESSSIMVRNNSIIGV+T ITLN ++RVGGLVRV
Sbjct: 223 EEVYIFPESSSIMVRNNSIIGVDTQITLNTRNRVGGLVRV 262
[94][TOP]
>UniRef100_A1XK44 RNA polymerase beta chain (Fragment) n=1 Tax=Phytolacca americana
RepID=A1XK44_PHYAM
Length = 862
Score = 227 bits (579), Expect = 4e-58
Identities = 125/215 (58%), Positives = 156/215 (72%), Gaps = 22/215 (10%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR------------LCPD--------HCHF 461
SL KDQDQ + HSL +R SN V+N+QV+ PD HC+
Sbjct: 45 SLHKDQDQTNVHSLSFEQRYISNSSVTNDQVKDKLLDPSSKKEARIPDYSEINRMGHCNL 104
Query: 460 MHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKNSILA 287
++P S+LLAK+RRNRFIIPF +S +E+ ELMP IS+E+PI+GI +NSI A
Sbjct: 105 IYPA---KNSDLLAKRRRNRFIIPF--QSSQEQEKELMPLSAISIEVPINGIFRRNSIFA 159
Query: 286 YFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEVHI 107
YFDDP+YR +SSGI KY T+ +HS+ +KEDLIEYRG++EF+PKYQ+KVDRFFFIP+EVHI
Sbjct: 160 YFDDPRYRRKSSGITKYGTVEMHSVVKKEDLIEYRGVKEFRPKYQMKVDRFFFIPEEVHI 219
Query: 106 LSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
L SSSIMVRNNSIIGV+T ITLN +SRVGG+VRV
Sbjct: 220 LPGSSSIMVRNNSIIGVDTQITLNTRSRVGGVVRV 254
[95][TOP]
>UniRef100_B1A925 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Carica papaya
RepID=RPOC2_CARPA
Length = 1387
Score = 227 bits (579), Expect = 4e-58
Identities = 126/220 (57%), Positives = 157/220 (71%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL + + S+ V+N+Q R L
Sbjct: 490 SLHKDQDQMNIHSLSVEQESISSLAVNNDQGRHKFFSSNFSDKKKCGIPDYSEFHRILDT 549
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
HC+ ++ + S+LLAK+RRNRFIIPF +SI+E+ ELMP IS+EIPI+GI +
Sbjct: 550 GHCNLIYFASLHENSDLLAKRRRNRFIIPF--QSIQEQEKELMPRSGISIEIPINGIFRR 607
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILA+FDDP+YR +SSGI KY TIG HSI +KED+IEYRG+++FK KYQ+KVDRFFFIP
Sbjct: 608 NSILAFFDDPRYRRKSSGILKYGTIGAHSIVKKEDVIEYRGVKKFKTKYQMKVDRFFFIP 667
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL ESSSIMVRNNSIIGV+T ITLN +S+VGGLVRV
Sbjct: 668 EEVHILPESSSIMVRNNSIIGVDTRITLNIRSQVGGLVRV 707
[96][TOP]
>UniRef100_A1XKE3 RNA polymerase beta chain (Fragment) n=1 Tax=Chloranthus
multistachys RepID=A1XKE3_CHLMT
Length = 827
Score = 227 bits (578), Expect = 6e-58
Identities = 128/222 (57%), Positives = 156/222 (70%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------LCPD----- 473
SL KDQDQM+ HSL + + S+ V+N++VR PD
Sbjct: 19 SLHKDQDQMNVHSLSVERGSISDLSVTNDRVRHKLFSSDLSGKKRGEILDYSGPDRIISN 78
Query: 472 ---HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGII 308
H +F++P I D S+LLAK+RRNRFIIPF + +ER ELMP IS+EIPI+GI+
Sbjct: 79 GHGHWNFIYPAILHDNSDLLAKRRRNRFIIPFQYD--QEREKELMPRSGISIEIPINGIL 136
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+ SILAYFDDP+YR SSGI KY TI + SI +KEDLIEYRG +EF+PKYQ+KVDRFFF
Sbjct: 137 RRKSILAYFDDPRYRRSSSGITKYGTIEVDSIVKKEDLIEYRGAKEFRPKYQMKVDRFFF 196
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHIL+ SSSIMVRNNSIIGV+T I LN +SRVGGLVRV
Sbjct: 197 IPEEVHILTGSSSIMVRNNSIIGVDTRIALNTRSRVGGLVRV 238
[97][TOP]
>UniRef100_A1XK68 RNA polymerase beta chain (Fragment) n=1 Tax=Idiospermum
australiense RepID=A1XK68_IDIAU
Length = 851
Score = 227 bits (578), Expect = 6e-58
Identities = 127/220 (57%), Positives = 154/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R S+ V+N +VR +
Sbjct: 37 SLHKDQDQMNVHSLSVEQRYISDLSVTNVRVRHKFFSSDSSGKKRGRVLDYSEPDRIISN 96
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
H +F++P I + S+LLAK+RRNRFIIPF +S +ER ELMP IS+EIPI+GI+ +
Sbjct: 97 GHWNFIYPAILHENSDLLAKRRRNRFIIPF--QSDQEREKELMPRSGISIEIPINGILRR 154
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR SSGI KY TIG+ SI +KEDLIEYR +EF+PKYQ+KVDRFFFIP
Sbjct: 155 NSILAYFDDPRYRRSSSGITKYGTIGVDSIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIP 214
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SS IMVRNNSIIGV+T I LN +SRVGGLVRV
Sbjct: 215 EEVHILPGSSPIMVRNNSIIGVDTRIALNTRSRVGGLVRV 254
[98][TOP]
>UniRef100_A1XK65 RNA polymerase beta chain (Fragment) n=1 Tax=Lardizabala biternata
RepID=A1XK65_9MAGN
Length = 861
Score = 227 bits (578), Expect = 6e-58
Identities = 126/220 (57%), Positives = 152/220 (69%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HS +R SN V+N+QVR +C
Sbjct: 45 SLHKDQDQMNVHSFSLERRYISNLSVTNDQVRHKLFRSDPSGKKEKRILDYSGSDRIICN 104
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
HC+F +P I + S L+AK+RRNRFIIPF + +ER EL+P IS+EIPI+GI +
Sbjct: 105 GHCNFTYPAILHENSYLVAKRRRNRFIIPF--QPNQEREKELIPCSGISIEIPINGIFRR 162
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR SSGI KY TI + SI +KEDLIEYRG +EF+ K Q+K+DRFFFIP
Sbjct: 163 NSILAYFDDPRYRRNSSGITKYGTIEVDSIVKKEDLIEYRGTKEFRSKDQLKIDRFFFIP 222
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSSIMVR+NSIIGV+T ITLN KSRVGGLVRV
Sbjct: 223 EEVHILPGSSSIMVRDNSIIGVDTQITLNIKSRVGGLVRV 262
[99][TOP]
>UniRef100_Q2MIB0 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Solanum
lycopersicum RepID=RPOC2_SOLLC
Length = 1392
Score = 227 bits (578), Expect = 6e-58
Identities = 123/220 (55%), Positives = 153/220 (69%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
S+ KDQDQM+ HSL +R TSN V+N+Q R +C
Sbjct: 494 SIHKDQDQMNAHSLSGKRRYTSNLSVTNDQARQKLFSSDFYGQKEDRIPDYSDLNRIICT 553
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
+ ++ I S LL+K+RRN+FIIP SI+E NELMP IS+EIP++GI +
Sbjct: 554 GQYNLVYSPILHGNSALLSKRRRNKFIIPL--HSIQELENELMPCSGISIEIPVNGIFRR 611
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR +SSGI KY TI HS+ +KEDLIEYRG++EF+PKYQ+KVDRFFFIP
Sbjct: 612 NSILAYFDDPRYRRKSSGIIKYGTIETHSVIKKEDLIEYRGVKEFRPKYQMKVDRFFFIP 671
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSS+MVRNNSI+GV+T ITLN +SRVGGLVRV
Sbjct: 672 EEVHILPGSSSLMVRNNSIVGVDTQITLNLRSRVGGLVRV 711
[100][TOP]
>UniRef100_Q09FX1 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Nandina domestica
RepID=RPOC2_NANDO
Length = 1377
Score = 227 bits (578), Expect = 6e-58
Identities = 123/218 (56%), Positives = 147/218 (67%), Gaps = 25/218 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +++ SN LV+NNQVR +C
Sbjct: 490 SLHKDQDQMNVHSLSAEQKSISNLLVTNNQVRHKFLSSEPSGKKGERILDYSGPNRIICN 549
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISVEIPIDGIIHKNS 296
HC+F++P I + S LLAK+RRNRFIIPF + +E+ IS+EIPI+GI +NS
Sbjct: 550 GHCNFIYPAILHENSYLLAKRRRNRFIIPFQYNQEQEKELITRSGISIEIPINGIFRRNS 609
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQE 116
ILAYFDDP+YR SSGI KY TI HSI +KEDLIEYR +PKYQ K+DRFFFIP+E
Sbjct: 610 ILAYFDDPRYRRNSSGITKYGTIEAHSIVKKEDLIEYRK----RPKYQTKIDRFFFIPEE 665
Query: 115 VHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
VHIL SSS+MVRNNSIIGVNT IT +SRVGGLVRV
Sbjct: 666 VHILPGSSSVMVRNNSIIGVNTRITFKTRSRVGGLVRV 703
[101][TOP]
>UniRef100_Q49L08 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Eucalyptus
globulus subsp. globulus RepID=RPOC2_EUCGG
Length = 1392
Score = 227 bits (578), Expect = 6e-58
Identities = 125/221 (56%), Positives = 157/221 (71%), Gaps = 28/221 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--LC-------------PD--------- 473
SL KDQDQM+ S +R S+ V+N+Q+R LC PD
Sbjct: 494 SLYKDQDQMNLRSTERERRYISSLSVNNDQMRYELCSSDFSGKIKEDRIPDYSELNRIIS 553
Query: 472 --HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIH 305
HC+ +PT + S+LLAK+RRNRF+IP +SI+ER ELMP IS+E+PI+GI+
Sbjct: 554 IVHCNLKYPTTFDENSDLLAKRRRNRFLIPL--QSIQERKKELMPHSGISIELPINGILR 611
Query: 304 KNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFI 125
+NSILAYFDDP+YR +SSGI KY T+G+HS+ +KEDLIEYRGI+EFK K Q+K+D FFFI
Sbjct: 612 RNSILAYFDDPRYRRKSSGIIKYGTLGVHSVVKKEDLIEYRGIKEFKQKCQMKLDPFFFI 671
Query: 124 PQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
P+EVHI ESSSIMVRNNS+IGV+T I LN +SRVGGLVRV
Sbjct: 672 PEEVHIFPESSSIMVRNNSLIGVDTRIALNTRSRVGGLVRV 712
[102][TOP]
>UniRef100_A1XKA7 RNA polymerase beta chain (Fragment) n=1 Tax=Coffea arabica
RepID=A1XKA7_COFAR
Length = 850
Score = 226 bits (577), Expect = 8e-58
Identities = 121/218 (55%), Positives = 156/218 (71%), Gaps = 25/218 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+TH L +R T V+N++VR +C
Sbjct: 28 SLHKDQDQMNTHFLSVKRRYTYKLSVTNDRVRYKFFSSDFYGKKKNRIPDYLDLNRIICT 87
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISVEIPIDGIIHKNS 296
+C+ ++P I + S+LL+K+RRNRFI+P +SI+ER NE P IS+EIPI+GI +NS
Sbjct: 88 GYCNRIYPAILHENSDLLSKRRRNRFIMPL--QSIQERENE-SPGISIEIPINGIFRRNS 144
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQE 116
IL+YFDDP+YR +SSGI KY TI +HS+ +KEDLIEYRG++EF+PKYQ+KVDRFFFIP+E
Sbjct: 145 ILSYFDDPRYRRKSSGITKYGTIEMHSLVKKEDLIEYRGVKEFRPKYQMKVDRFFFIPEE 204
Query: 115 VHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
VHIL SIMV+NNSIIG++T ITLN +SRVGGLVRV
Sbjct: 205 VHILPGFFSIMVQNNSIIGIDTQITLNIRSRVGGLVRV 242
[103][TOP]
>UniRef100_Q3C1G9 DNA-directed RNA polymerase subunit beta'' n=3 Tax=Nicotiana
RepID=RPOC2_NICSY
Length = 1392
Score = 226 bits (577), Expect = 8e-58
Identities = 121/220 (55%), Positives = 154/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
S+ KDQDQM+ H L +R TSN V+N+Q R +C
Sbjct: 494 SIHKDQDQMNAHFLSGKRRYTSNLSVTNDQARQKLFSSDFSGKKEDRIPDYSDLNRIICA 553
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
+ ++ I + S+LL+K+RRN+FIIP SI+E NELMP IS+EIP++GI +
Sbjct: 554 GQYNLVYSPILHENSDLLSKRRRNKFIIPL--HSIQELENELMPCSGISIEIPVNGIFRR 611
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR +SSGI KY T+ HS+ +KEDL+EYRG++EF+PKYQ+KVDRFFFIP
Sbjct: 612 NSILAYFDDPRYRRKSSGIIKYGTVETHSVIKKEDLLEYRGVKEFRPKYQMKVDRFFFIP 671
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSSIMVRNNSI+GV+T ITLN +SRVGGLVRV
Sbjct: 672 EEVHILPGSSSIMVRNNSIVGVDTQITLNLRSRVGGLVRV 711
[104][TOP]
>UniRef100_A1XK36 RNA polymerase beta chain (Fragment) n=1 Tax=Tasmannia insipida
RepID=A1XK36_TASIN
Length = 825
Score = 226 bits (576), Expect = 1e-57
Identities = 125/220 (56%), Positives = 154/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R +S+ V+N++VR +
Sbjct: 7 SLHKDQDQMNIHSLSVEQRESSDLSVTNDRVRHKLFSSDPSGKKEGKILDYSGPARIISN 66
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
+F++P I + S+LLAK+RRNRFIIPF + +ER ELMP IS+EIPI+GI+ +
Sbjct: 67 GRWNFIYPAILHENSDLLAKRRRNRFIIPFQYD--QEREKELMPRSGISIEIPINGILRR 124
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR SSGI KY T+ + SI +KEDLIEYRG +EF PKYQ+KVDRFFFIP
Sbjct: 125 NSILAYFDDPRYRRSSSGITKYGTVEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIP 184
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSSIMVRNNSIIGV+T ITLN +S VGGLVRV
Sbjct: 185 EEVHILPGSSSIMVRNNSIIGVDTRITLNTRSHVGGLVRV 224
[105][TOP]
>UniRef100_A1XK67 RNA polymerase beta chain (Fragment) n=1 Tax=Chimonanthus praecox
RepID=A1XK67_9MAGN
Length = 857
Score = 226 bits (575), Expect = 1e-57
Identities = 127/220 (57%), Positives = 154/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------LCPD---------- 473
SL KDQDQM+ HSL +R S+ V+N +VR PD
Sbjct: 45 SLHKDQDQMNVHSLSVEQRYISDLSVTNVRVRHKLFSSDSSGKKGGRAPDYSGPDRIISN 104
Query: 472 -HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
H +F++P I + S+LLAK+RRNRFIIPF +S +ER ELMP IS+EIPI+GI+ +
Sbjct: 105 GHWNFIYPAILHENSDLLAKRRRNRFIIPF--QSDQEREKELMPRSGISIEIPINGILRR 162
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR SSGI KY T G+ SI +KEDLIEYR +EF+PKYQ+KVDRFFFIP
Sbjct: 163 NSILAYFDDPRYRRSSSGITKYGTTGVDSIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIP 222
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SS +MVRNNSIIGV+T I LN +SRVGGLVRV
Sbjct: 223 EEVHILPASSPVMVRNNSIIGVDTRIALNTRSRVGGLVRV 262
[106][TOP]
>UniRef100_A1XK22 RNA polymerase beta chain (Fragment) n=1 Tax=Akebia quinata
RepID=A1XK22_AKEQU
Length = 861
Score = 226 bits (575), Expect = 1e-57
Identities = 126/220 (57%), Positives = 152/220 (69%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ +S +R SN V+N+QVR +C
Sbjct: 45 SLHKDQDQMNVNSFSLERRYISNLSVTNDQVRHKLFRSDPSGKKAKRILDYSGPDRIICK 104
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
HC+F +P I + S+L+AK+RRNRFIIPF + +ER EL+P IS+EIPI+GI
Sbjct: 105 GHCNFTYPAILHENSDLVAKRRRNRFIIPF--QPNQEREKELIPCSGISIEIPINGIFRI 162
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR SSGI KY TI + SI +KEDLIEYRG +EF+ K Q+K+DRFFFIP
Sbjct: 163 NSILAYFDDPRYRRNSSGITKYGTIEVDSIVKKEDLIEYRGTKEFRSKDQLKIDRFFFIP 222
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSSIMVRNNSIIGV+T ITLN KSRVGGLVRV
Sbjct: 223 EEVHILPGSSSIMVRNNSIIGVDTQITLNIKSRVGGLVRV 262
[107][TOP]
>UniRef100_A1XK18 RNA polymerase beta chain (Fragment) n=1 Tax=Sargentodoxa cuneata
RepID=A1XK18_9MAGN
Length = 861
Score = 225 bits (573), Expect = 2e-57
Identities = 124/219 (56%), Positives = 153/219 (69%), Gaps = 27/219 (12%)
Frame = -2
Query: 577 LLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCPD 473
L KDQDQM+ +SL +R SN V+N+QVR +C
Sbjct: 46 LHKDQDQMNVNSLSPERRYISNPSVTNDQVRHKLFRSDPSGKKGKGILDYSVPDRIICNG 105
Query: 472 HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKN 299
HC+F +P I + S L+AK+RRNRFIIPF + +ER EL+P IS+ IPI+GI +N
Sbjct: 106 HCNFTYPAILHENSALVAKRRRNRFIIPF--QPNQEREKELIPYSGISIAIPINGIFRRN 163
Query: 298 SILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQ 119
SILAYFDD QYR SSGI KY TI +HSI +K+DLIEYRG +EF+ KYQ+K+DRFFFIP+
Sbjct: 164 SILAYFDDLQYRRNSSGITKYGTIEMHSIVKKDDLIEYRGTKEFRSKYQMKIDRFFFIPE 223
Query: 118 EVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
EVHIL S+SIMVRNNS+IGV+T ITLN+KSRVGGLVRV
Sbjct: 224 EVHILPGSASIMVRNNSLIGVDTQITLNRKSRVGGLVRV 262
[108][TOP]
>UniRef100_A0ZZ25 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Gossypium
barbadense RepID=RPOC2_GOSBA
Length = 1391
Score = 225 bits (573), Expect = 2e-57
Identities = 122/222 (54%), Positives = 156/222 (70%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQ++ H L +R S F V+N+QVR +
Sbjct: 490 SLHKDQDQINIHYLSAERRYISRFSVNNDQVRHNLFSSDFSDEKEERIYDYSELNRIIGT 549
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELM----PDISVEIPIDGII 308
HC F++ I + ++LLAK+RRNRFIIPF + I+++ ELM IS+EIPI+GI
Sbjct: 550 GHCDFIYSAILHENADLLAKRRRNRFIIPF--QLIQDQEKELMLHSHSGISMEIPINGIF 607
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+ ILA+FDDP+YR +SSGI KY T+G HSI ++ED+IEYRG+++ KPKYQ+KVDRFFF
Sbjct: 608 RRKGILAFFDDPRYRRKSSGITKYGTLGAHSIVKREDVIEYRGVKKVKPKYQMKVDRFFF 667
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHILSESSSIMVRNNSIIGV+TPITLN +S+VGGLVRV
Sbjct: 668 IPEEVHILSESSSIMVRNNSIIGVDTPITLNTRSQVGGLVRV 709
[109][TOP]
>UniRef100_A9XWA5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Picramnia polyantha
RepID=A9XWA5_9ROSI
Length = 1275
Score = 224 bits (572), Expect = 3e-57
Identities = 126/225 (56%), Positives = 154/225 (68%), Gaps = 32/225 (14%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQ + HS +R SN V+N++VR +C
Sbjct: 450 SLHKDQDQTNIHSPSGEQRYISNLSVNNDRVRYKFFSSDFLDKKEGGILDYSELNQIVCT 509
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP-------DISVEIPID 317
C+ P I + S+LLAK+RRNRFIIPF +SI+E+ NE MP IS+E+PI+
Sbjct: 510 GRCNLTSPAILYENSDLLAKRRRNRFIIPF--QSIQEQENEPMPRSGISISGISIEMPIN 567
Query: 316 GIIHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDR 137
GI +NSILAYFDDP YR +SSGI KY TIG+ SI +KEDLIEYRG++EFKPKYQ++VD
Sbjct: 568 GIFRRNSILAYFDDPCYRKKSSGITKYGTIGMQSIVKKEDLIEYRGVKEFKPKYQMRVDP 627
Query: 136 FFFIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
FFFIP+EVHIL ESSSIMVRNNSIIGV+T I+L +SRVGGLVRV
Sbjct: 628 FFFIPEEVHILPESSSIMVRNNSIIGVDTRISLRTRSRVGGLVRV 672
[110][TOP]
>UniRef100_A9XW60 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cephalotus
follicularis RepID=A9XW60_CEPFO
Length = 1257
Score = 224 bits (572), Expect = 3e-57
Identities = 123/220 (55%), Positives = 153/220 (69%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R + V+N+QVR C
Sbjct: 460 SLQKDQDQMNVHSLSVERRYIFSLSVNNDQVRHKFLSSDLSGKKESRIPHYSELNRIKCT 519
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
D+ + ++P I + S+LLAK+R+N+ IIPF +SI+ER ELM IS+EIPI GI +
Sbjct: 520 DYSNLIYPAILQENSDLLAKRRKNKLIIPF--QSIQEREKELMARSGISIEIPISGIFRR 577
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFD PQYR +SSGI KY TIG+HSI +KEDLIEY G++EFKPKYQ+K+D+FFFIP
Sbjct: 578 NSILAYFDAPQYRRKSSGITKYGTIGMHSIVKKEDLIEYPGVKEFKPKYQMKIDQFFFIP 637
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EV+IL ESS I VRNNSIIGV+T I LN KS+VGGLVRV
Sbjct: 638 EEVYILPESSPIRVRNNSIIGVDTKIALNTKSQVGGLVRV 677
[111][TOP]
>UniRef100_A1XKD7 RNA polymerase beta chain (Fragment) n=1 Tax=Persoonia katerae
RepID=A1XKD7_9MAGN
Length = 827
Score = 224 bits (572), Expect = 3e-57
Identities = 128/222 (57%), Positives = 154/222 (69%), Gaps = 30/222 (13%)
Frame = -2
Query: 577 LLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------------------LCP 476
L KDQDQ+ HSL +R SNF V+N+QVR LC
Sbjct: 1 LHKDQDQIKVHSLSGERRYISNFSVTNDQVRHKLFSSYPSSKKRGERILYYSGPDRILCN 60
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
C+F +P I + S+LLAK+RRNRFIIPF +S +ER +E+M IS+EIPI+GI +
Sbjct: 61 SRCNFAYPAILRENSDLLAKRRRNRFIIPF--QSNQERESEVMSGSSISIEIPINGIFRR 118
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKP--KYQIKVDRFFF 128
NSILAYFDDP+YR +SSGI K TI +HSI +KEDLIEYR +EF+P K Q KVDRFFF
Sbjct: 119 NSILAYFDDPRYRRKSSGITKPGTIEVHSIVKKEDLIEYRRAKEFRPKCKMQTKVDRFFF 178
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHIL ESSSIMVRNNSIIG++T ITLN +SRVGGLVRV
Sbjct: 179 IPEEVHILPESSSIMVRNNSIIGIDTRITLNIRSRVGGLVRV 220
[112][TOP]
>UniRef100_A1XK89 RNA polymerase beta chain (Fragment) n=1 Tax=Saruma henryi
RepID=A1XK89_SARHE
Length = 799
Score = 224 bits (572), Expect = 3e-57
Identities = 126/220 (57%), Positives = 151/220 (68%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R S+ V+N++VR +
Sbjct: 18 SLHKDQDQMNVHSLSVEQRYISDLSVTNDRVRHKLFSSYPSGKKGDRSFYYSRPDRIIST 77
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
H +F++ I + S+LLAK+RRNRFIIPF + +E+ EL+P IS+EIPI GI K
Sbjct: 78 GHWNFIYSAILHENSDLLAKRRRNRFIIPFQYD--QEQEKELIPRSGISIEIPITGIFRK 135
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR SSGI KY TI + SI +KEDLIEYRG +EF PKYQ+KVDRFFFIP
Sbjct: 136 NSILAYFDDPRYRRSSSGITKYGTIEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIP 195
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSSIMVRNNSIIGVNT I LN +SRVGGLVRV
Sbjct: 196 EEVHILPGSSSIMVRNNSIIGVNTQIALNTRSRVGGLVRV 235
[113][TOP]
>UniRef100_A1XK41 RNA polymerase beta chain (Fragment) n=1 Tax=Liriodendron chinense
RepID=A1XK41_LIRCH
Length = 839
Score = 224 bits (572), Expect = 3e-57
Identities = 126/220 (57%), Positives = 154/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------LCPD---------- 473
SL KDQDQM+ HSL +R S V+N++VR PD
Sbjct: 25 SLHKDQDQMNVHSLSVERRFISGLSVTNDRVRHKLFSSDPSGKKKERIPDYSGPDRIISN 84
Query: 472 -HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
H +F++P I + S+LLAK+RRNRFIIPF + +ER ELMP IS+EIPI+GI+ +
Sbjct: 85 GHWNFLYPAILHENSDLLAKRRRNRFIIPFQYD--QEREKELMPRSGISIEIPINGILRR 142
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
++ILAYFDDP+YR SSGI KY TI + SI +KEDLIEYRG +EF+PKYQ+KVDRFFFIP
Sbjct: 143 DTILAYFDDPRYRRSSSGITKYGTIEVDSIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIP 202
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SS IMVRNNSIIGV+T I LN +SRVGGLVRV
Sbjct: 203 EEVHILPGSSPIMVRNNSIIGVDTRIALNTRSRVGGLVRV 242
[114][TOP]
>UniRef100_Q0G9M9 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Liriodendron
tulipifera RepID=RPOC2_LIRTU
Length = 1382
Score = 224 bits (572), Expect = 3e-57
Identities = 124/220 (56%), Positives = 154/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R S+ V+N++VR +
Sbjct: 493 SLHKDQDQMNVHSLSVERRYISDLSVTNDRVRHKLFSSDPSGKKKERILDYSGPDRIVSN 552
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
H +F++P I + S+LLAK+RRNRFIIPF + +ER ELMP IS+EIPI+GI+ +
Sbjct: 553 GHWNFLYPAILHENSDLLAKRRRNRFIIPFQYD--QEREKELMPRSGISIEIPINGILRR 610
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
++ILAYFDDP+YR SSGI KY TI + SI +KEDLIEYRG +EF+PKYQ+KVDRFFFIP
Sbjct: 611 DTILAYFDDPRYRRSSSGITKYGTIEVDSIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIP 670
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SS IMVRNNSIIGV+T I LN +SRVGGLVRV
Sbjct: 671 EEVHILPGSSPIMVRNNSIIGVDTRIALNTRSRVGGLVRV 710
[115][TOP]
>UniRef100_A6MMB2 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Chloranthus
spicatus RepID=RPOC2_CHLSC
Length = 1389
Score = 224 bits (572), Expect = 3e-57
Identities = 127/222 (57%), Positives = 155/222 (69%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------LCPD----- 473
SL KDQDQM+ HSL + + S+ V+N++VR PD
Sbjct: 489 SLHKDQDQMNVHSLSVERGSISDLSVTNDRVRHKLFSSDLSGKKRGGILDYSGPDRIISN 548
Query: 472 ---HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGII 308
H +F++P I + S+LLAK+RRNRFIIPF + +ER ELMP IS+EIPI+GI
Sbjct: 549 GHGHWNFIYPAILHENSDLLAKRRRNRFIIPFQYD--QEREKELMPRSGISIEIPINGIF 606
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+ SILAYFDDP+YR SSGI KY TI + SI +KEDLIEYRG +EF+PKYQ+KVDRFFF
Sbjct: 607 RRKSILAYFDDPRYRKSSSGITKYGTIEVDSIVKKEDLIEYRGAKEFRPKYQMKVDRFFF 666
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHIL+ SSSIMVRNNSIIGV+T I LN +SRVGGLVRV
Sbjct: 667 IPEEVHILTGSSSIMVRNNSIIGVDTRIALNTRSRVGGLVRV 708
[116][TOP]
>UniRef100_A9XWC1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Swietenia macrophylla
RepID=A9XWC1_9ROSI
Length = 1291
Score = 224 bits (571), Expect = 4e-57
Identities = 125/227 (55%), Positives = 157/227 (69%), Gaps = 34/227 (14%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTS--NFLVSNNQVRL-------------------CPD--- 473
SL KDQDQM+ HSL +R+ S + V+N+Q R PD
Sbjct: 463 SLHKDQDQMNIHSLSVERRDISSLSLSVNNDQARARHKLFSSYFSAKKEGGIFEIPDYSG 522
Query: 472 --------HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIP 323
HC+ +HP I S+LLAK+RRNRF+IP F+SI+E+ ELMP IS+EIP
Sbjct: 523 FNRIIGTGHCNLIHPPIRHANSDLLAKRRRNRFLIP--FQSIQEQEKELMPHSGISIEIP 580
Query: 322 IDGIIHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKV 143
I GI+ +NSILAYFDDP+YR +SSGI KY T+G HSI +KE+LIEYRG+++ KPKYQ+K+
Sbjct: 581 IKGILRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKENLIEYRGLKKMKPKYQMKI 640
Query: 142 DRFFFIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
DRFFFIP+EVH L E S IMVRNNSI+GV+T ITLN +SRVGGLVR+
Sbjct: 641 DRFFFIPEEVHTLPEFSYIMVRNNSIVGVDTRITLNIRSRVGGLVRM 687
[117][TOP]
>UniRef100_A1XK33 RNA polymerase beta chain (Fragment) n=1 Tax=Sarcandra
chloranthoides RepID=A1XK33_9MAGN
Length = 849
Score = 224 bits (571), Expect = 4e-57
Identities = 127/222 (57%), Positives = 155/222 (69%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------LCPD----- 473
SL KDQDQM+ HSL + + S+ V+N++VR PD
Sbjct: 26 SLHKDQDQMNVHSLSVERGSISDLSVTNDRVRHKLFSSGLSGKKRGGVLDYSGPDRIISN 85
Query: 472 ---HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGII 308
H +F++P I + S+LLAK+RRNRFIIPF + +ER ELMP IS+EIPI+GI+
Sbjct: 86 GHGHWNFIYPAILHENSDLLAKRRRNRFIIPFQYD--QEREKELMPRSVISIEIPINGIL 143
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+ SILAYFDDP+YR SSGI KY TI + SI +KEDLIEYRG +EF+PKYQ+KVDRFFF
Sbjct: 144 RRKSILAYFDDPRYRRSSSGITKYGTIEVDSIVKKEDLIEYRGAKEFRPKYQMKVDRFFF 203
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHIL SSSIMVRNNSIIGV+T I LN +SRVGGLVRV
Sbjct: 204 IPEEVHILPGSSSIMVRNNSIIGVDTRIALNTRSRVGGLVRV 245
[118][TOP]
>UniRef100_A4GYP8 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Populus
trichocarpa RepID=RPOC2_POPTR
Length = 1390
Score = 224 bits (571), Expect = 4e-57
Identities = 121/220 (55%), Positives = 155/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR---------------------------L 482
SL KDQDQ++ HSL + SN V+N++V+ +
Sbjct: 490 SLHKDQDQINVHSLSVERGYISNPSVNNDKVKHKFFSSYLSSKSKKKSRILDYSDLNRMI 549
Query: 481 CPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISVEIPIDGIIHK 302
C F++PTI + S+LLAK+R+NRFIIPF +SI+E+ DI +EIPI+GI +
Sbjct: 550 CTG---FIYPTILHENSDLLAKRRKNRFIIPF--QSIQEKELMSHSDILIEIPINGIFRR 604
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSI AYFDDPQYR +SSGI KY IG+HSI +KEDL+EYRG++EF+PKYQ+KVDRFFFIP
Sbjct: 605 NSIFAYFDDPQYRRKSSGITKYVAIGVHSIVKKEDLVEYRGVKEFQPKYQMKVDRFFFIP 664
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EV+IL ESSS+MVRNNSIIGV+T ITLN KSRVGGL+R+
Sbjct: 665 EEVYILPESSSLMVRNNSIIGVDTQITLNTKSRVGGLIRI 704
[119][TOP]
>UniRef100_A9XW58 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ceanothus prostratus
RepID=A9XW58_9ROSA
Length = 1281
Score = 224 bits (570), Expect = 5e-57
Identities = 130/226 (57%), Positives = 160/226 (70%), Gaps = 33/226 (14%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFL----VSNNQVR------------------------ 485
SL KDQDQ + H L +A+ N + L V+N+QV+
Sbjct: 463 SLHKDQDQTNVHFL-SAEGNFFSSLSGNPVNNDQVKHKFFSFGLSGKKESIISDYSEFNR 521
Query: 484 -LCPDHCHFMHPTISPDTSNL--LAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPI 320
+ HC+F+ P+I + S+L LAK+RRNRFIIPF + I++R ELMP IS+EIPI
Sbjct: 522 IIYKGHCNFIFPSILHENSDLFLLAKRRRNRFIIPFQW--IQKREKELMPHSTISIEIPI 579
Query: 319 DGIIHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVD 140
+GI +N I AYFDDPQYR +SSGI KY TIG++SI +KEDLIEYRG++EFKPKYQ+KVD
Sbjct: 580 NGIFRRNIIFAYFDDPQYRRKSSGITKYGTIGLYSILKKEDLIEYRGVKEFKPKYQMKVD 639
Query: 139 RFFFIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
RFFFIP+EVHIL ESSSIMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 640 RFFFIPEEVHILPESSSIMVRNNSIIGVDTRITLNTRSRVGGLVRV 685
[120][TOP]
>UniRef100_A1XKA8 RNA polymerase beta chain (Fragment) n=1 Tax=Cinnamomum camphora
RepID=A1XKA8_CINCA
Length = 777
Score = 224 bits (570), Expect = 5e-57
Identities = 126/219 (57%), Positives = 156/219 (71%), Gaps = 26/219 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR------------------------LCPD 473
SL KDQDQM+ HS+ +R+ S+ V+N+QVR +
Sbjct: 2 SLHKDQDQMNVHSVE--RRSISDLSVTNDQVRHKLFSSNPYGKKGGVLDYSGPDRIISNG 59
Query: 472 HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKN 299
H +F++PTI + S+LLAK+RRNRFIIPF +S +ER ELMP IS+EIPI+G++ +N
Sbjct: 60 HWNFIYPTILHENSDLLAKRRRNRFIIPF--QSDQEREKELMPRSGISIEIPINGVLPRN 117
Query: 298 SILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQ 119
SILAYFDDP YR SSGI KY TIG+ SI +KEDLIEYR +EF+PKYQ+KVDRFFFIP+
Sbjct: 118 SILAYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPE 177
Query: 118 EVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
EVHIL SS IMVRNNSIIGV+T I LN +S+VGGLVRV
Sbjct: 178 EVHILPGSSPIMVRNNSIIGVDTRIALNTRSQVGGLVRV 216
[121][TOP]
>UniRef100_A1XK60 RNA polymerase beta chain (Fragment) n=1 Tax=Nepenthes sp. 'Kosobe'
RepID=A1XK60_9CARY
Length = 856
Score = 224 bits (570), Expect = 5e-57
Identities = 124/220 (56%), Positives = 156/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------LCPD---------- 473
SL KDQDQ S HS+ +R SN V+N+ +R PD
Sbjct: 45 SLHKDQDQTSIHSISVEQRYISNSSVTNDPMRHKFFSSDLSSNKENRIPDYSELNRIVST 104
Query: 472 -HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
HC+ ++P S+LLAK+RRN+FIIPF +SI+ER EL+P D+S+EIPI+GI +
Sbjct: 105 GHCNLIYPA---KNSDLLAKRRRNKFIIPF--QSIQEREKELIPPSDLSIEIPINGIFRR 159
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR +SSGI +Y+TI HSI +KE LIEYRG++EF+PKYQ+KVDRFFFIP
Sbjct: 160 NSILAYFDDPRYRRKSSGITQYRTIEAHSIVKKEGLIEYRGVKEFRPKYQMKVDRFFFIP 219
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+E+HIL SS IMVRNNS+IGV+T ITLN +SRVGGLVRV
Sbjct: 220 EEMHILPASSYIMVRNNSLIGVDTQITLNTRSRVGGLVRV 259
[122][TOP]
>UniRef100_A1XK05 RNA polymerase beta chain (Fragment) n=1 Tax=Spinacia oleracea
RepID=A1XK05_SPIOL
Length = 839
Score = 224 bits (570), Expect = 5e-57
Identities = 128/215 (59%), Positives = 155/215 (72%), Gaps = 22/215 (10%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR------------LCPD--------HCHF 461
SL KDQDQM+THSL + SN V+N+QV+ D HC+
Sbjct: 32 SLSKDQDQMNTHSLSFEQIYISNPSVTNDQVKDKLSDSFSKKEDRITDYSELNRIGHCNL 91
Query: 460 MHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKNSILA 287
++P + D LLAKKRRNRFIIPF + +ER ELM IS+EIPI+GI KNSI A
Sbjct: 92 IYPAKNLD---LLAKKRRNRFIIPF--QGSQERKKELMSLSGISIEIPINGIFRKNSIFA 146
Query: 286 YFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEVHI 107
YFDDP+YR +SSGI KY TI +HSI +KEDLIEYRG++EF+PKYQ+KVDRFFFIP+EVHI
Sbjct: 147 YFDDPRYRRKSSGITKYGTIEMHSIVKKEDLIEYRGVKEFRPKYQMKVDRFFFIPEEVHI 206
Query: 106 LSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
L+ SSSIMVRNNSIIGV+T ITLN +SR+GG+VRV
Sbjct: 207 LAGSSSIMVRNNSIIGVDTWITLNTRSRIGGVVRV 241
[123][TOP]
>UniRef100_P11704 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Spinacia oleracea
RepID=RPOC2_SPIOL
Length = 1361
Score = 224 bits (570), Expect = 5e-57
Identities = 128/215 (59%), Positives = 155/215 (72%), Gaps = 22/215 (10%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR------------LCPD--------HCHF 461
SL KDQDQM+THSL + SN V+N+QV+ D HC+
Sbjct: 494 SLSKDQDQMNTHSLSFEQIYISNPSVTNDQVKDKLSDSFSKKEDRITDYSELNRIGHCNL 553
Query: 460 MHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKNSILA 287
++P + D LLAKKRRNRFIIPF + +ER ELM IS+EIPI+GI KNSI A
Sbjct: 554 IYPAKNLD---LLAKKRRNRFIIPF--QGSQERKKELMSLSGISIEIPINGIFRKNSIFA 608
Query: 286 YFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEVHI 107
YFDDP+YR +SSGI KY TI +HSI +KEDLIEYRG++EF+PKYQ+KVDRFFFIP+EVHI
Sbjct: 609 YFDDPRYRRKSSGITKYGTIEMHSIVKKEDLIEYRGVKEFRPKYQMKVDRFFFIPEEVHI 668
Query: 106 LSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
L+ SSSIMVRNNSIIGV+T ITLN +SR+GG+VRV
Sbjct: 669 LAGSSSIMVRNNSIIGVDTWITLNTRSRIGGVVRV 703
[124][TOP]
>UniRef100_A9XWA2 DNA-directed RNA polymerase n=1 Tax=Oxalis latifolia
RepID=A9XWA2_9ROSI
Length = 1370
Score = 223 bits (569), Expect = 6e-57
Identities = 122/220 (55%), Positives = 149/220 (67%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HS +R S ++N+QVR LC
Sbjct: 488 SLHKDQDQMNVHSSSVERRCNSRLSINNDQVRHKFFSSNLFGKKESRIPHYSELNRVLCI 547
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
C+ + P + + S L+AK+RR +FIIP +SI+E EL P DIS+EIPI GI +
Sbjct: 548 GRCNLIDPALLHENSYLMAKRRRKKFIIPL--QSIQEHEKELKPRSDISIEIPISGIFRR 605
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSI +YFDDPQYR +SSGI KY TIG+HSI +KEDLIEYRG++EFK KYQ KVDRF FIP
Sbjct: 606 NSIFSYFDDPQYRRRSSGITKYGTIGVHSIVKKEDLIEYRGVKEFKQKYQKKVDRFCFIP 665
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EV+I ESSSIMVRNNSIIGV+T ITLN ++RVGGLVRV
Sbjct: 666 EEVYIFPESSSIMVRNNSIIGVDTQITLNTRNRVGGLVRV 705
[125][TOP]
>UniRef100_A6YAL3 RNA polymerase beta' subunit (Fragment) n=1 Tax=Paeonia brownii
RepID=A6YAL3_9MAGN
Length = 862
Score = 223 bits (569), Expect = 6e-57
Identities = 121/226 (53%), Positives = 153/226 (67%), Gaps = 33/226 (14%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR---------------------------L 482
SL KDQDQ++ HS+ +++ S+ ++N+QVR +
Sbjct: 42 SLHKDQDQINAHSISVEQKSISSLSLTNDQVRHKLFRSDLSLSDKKEGGIPNYSELNRII 101
Query: 481 CPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP------DISVEIPI 320
HC+ ++P I + S LLAK+RRNRFIIPF +SIRER E P I + IPI
Sbjct: 102 WTGHCNLIYPAILLENSYLLAKRRRNRFIIPF--QSIREREKEQPPHSDSGSSIEIPIPI 159
Query: 319 DGIIHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVD 140
+GI +NSILAYFDDP+YR SSGI KY T+ HS+ +KEDL+EYRG++EFKPKYQ+KVD
Sbjct: 160 NGIFRRNSILAYFDDPRYRRNSSGITKYGTVEAHSLVKKEDLVEYRGVKEFKPKYQMKVD 219
Query: 139 RFFFIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
RFFFIP+EVHIL SSSIMVRNNSIIG++T I LN +SRVGGLVRV
Sbjct: 220 RFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNIRSRVGGLVRV 265
[126][TOP]
>UniRef100_A1XKB7 RNA polymerase beta chain (Fragment) n=1 Tax=Galbulimima
belgraveana RepID=A1XKB7_GALBE
Length = 811
Score = 223 bits (569), Expect = 6e-57
Identities = 124/220 (56%), Positives = 154/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R ++ V+N++VR +
Sbjct: 5 SLHKDQDQMNVHSLSVERRYIADPSVTNDRVRHKLFSSDPSGKKGGDILDYSGPDRIISN 64
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
H +F++P I + S+LLAK+ RNRFIIPF R +ER ELMP IS+EIPI+GI+ +
Sbjct: 65 GHWNFLYPAILHENSDLLAKRPRNRFIIPF--RYDQEREKELMPRSGISIEIPINGILRR 122
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR +SSGI KY T+ + SI +KEDLIEYRG +EF+PKYQ+KVDRFFFIP
Sbjct: 123 NSILAYFDDPRYRRRSSGITKYGTVEVDSIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIP 182
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SS IMVRNNSIIGV T ITLN ++RVGGLVRV
Sbjct: 183 EEVHILPGSSPIMVRNNSIIGVGTRITLNTRNRVGGLVRV 222
[127][TOP]
>UniRef100_C3UNW2 DNA-directed RNA polymerase n=1 Tax=Megaleranthis saniculifolia
RepID=C3UNW2_9MAGN
Length = 1383
Score = 223 bits (568), Expect = 8e-57
Identities = 122/218 (55%), Positives = 152/218 (69%), Gaps = 25/218 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQ++ HSL + ++ SN V+N+QVR +
Sbjct: 490 SLHKDQDQINIHSLSSERKYISNLSVTNDQVRHKLFRSDPSGKKRERVLYYSEPDRIIWN 549
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISVEIPIDGIIHKNS 296
HC+F++P I D S+LLAK+RRNRFIIPF +S +E+ IS+EIPI+G+ +NS
Sbjct: 550 GHCNFIYPAILDDNSDLLAKRRRNRFIIPF--QSNQEKEPIPRSGISIEIPINGLFRRNS 607
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQE 116
ILAYFDDP+YR +SSGI KY TI + SI +KEDLIEYR +EF+PKYQ+K+DRFFFIP+E
Sbjct: 608 ILAYFDDPRYRRKSSGITKYGTIEVDSIVKKEDLIEYRRTKEFRPKYQMKIDRFFFIPEE 667
Query: 115 VHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
VHIL SSSIMVRNNSIIGV T IT N +SRVGGLVRV
Sbjct: 668 VHILPGSSSIMVRNNSIIGVATRITFNIRSRVGGLVRV 705
[128][TOP]
>UniRef100_A9XWA0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nitraria retusa
RepID=A9XWA0_9ROSI
Length = 1272
Score = 223 bits (568), Expect = 8e-57
Identities = 123/222 (55%), Positives = 158/222 (71%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVRL--------------CPDH--------- 470
SL KDQDQM+ HSL +R+ S+ V+N+QVR PD+
Sbjct: 449 SLHKDQDQMNIHSLSAERRSISSLSVNNDQVRQKFFSSDFSEKKEGGIPDYSEFNRIIGT 508
Query: 469 --CHFMHPTISPDTSN--LLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGII 308
C+ ++P I + S+ LLAK+RRNRF+IP +S +E+ ELMP I++EIPI GI
Sbjct: 509 GYCNLIYPAILHENSDFYLLAKRRRNRFLIPL--QSSQEQEKELMPHSGIAMEIPIKGIF 566
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
H+NSILAYFDDP+YR + SG+ KY TIG HSI +K+DLIEYRG+++ KPKYQ+K+DRFFF
Sbjct: 567 HRNSILAYFDDPRYRRKGSGMTKYGTIGAHSIVKKDDLIEYRGVKKIKPKYQMKIDRFFF 626
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHIL ESS +MVRNNSIIGV+T ITLN +S+VGGLVRV
Sbjct: 627 IPEEVHILPESSYVMVRNNSIIGVDTRITLNIRSQVGGLVRV 668
[129][TOP]
>UniRef100_A9XW46 DNA-directed RNA polymerase (Fragment) n=1 Tax=Aphloia theiformis
RepID=A9XW46_9ROSI
Length = 1273
Score = 223 bits (568), Expect = 8e-57
Identities = 126/221 (57%), Positives = 152/221 (68%), Gaps = 31/221 (14%)
Frame = -2
Query: 571 KDQDQMSTHSLPTAKRNTSNFLVSNNQV-------------------------RLCPDHC 467
KDQDQMS HS+ +R S+ V N+QV +C H
Sbjct: 462 KDQDQMSIHSISVERRYISSLSVDNDQVIHKFCSSDFSGKKEVRIHDYSELNRMICTGHS 521
Query: 466 HFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHKNSI 293
+F++P I D +LLAK+RRNRF+IPF +SI+E+ ELMP IS++IPI+ I KNSI
Sbjct: 522 NFIYPAILHDNLDLLAKRRRNRFLIPF--QSIQEQEKELMPHSGISIKIPINAIFLKNSI 579
Query: 292 LAYFDDPQYRTQSSGIAKYKTIGIHSIF--QKEDLIEYRGIREFKPK--YQIKVDRFFFI 125
LAYFDDPQYR +SSGI KY TIG+H +KEDLIEYRGI+EFKPK Q+KVDR FFI
Sbjct: 580 LAYFDDPQYRRKSSGITKYGTIGVHPTVKKEKEDLIEYRGIKEFKPKCQMQMKVDRLFFI 639
Query: 124 PQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
P+EVHIL ESSSIMVRNNSI+GV+T ITLN +SR GGLVRV
Sbjct: 640 PEEVHILPESSSIMVRNNSIVGVDTQITLNTRSRAGGLVRV 680
[130][TOP]
>UniRef100_A9QAX6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anethum graveolens
RepID=A9QAX6_9APIA
Length = 1386
Score = 223 bits (568), Expect = 8e-57
Identities = 124/217 (57%), Positives = 154/217 (70%), Gaps = 24/217 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------LCPDH--------C 467
S+ KDQDQ + S KR+ SN V+N+Q R PD+ C
Sbjct: 494 SIHKDQDQTNARSFSVNKRSISNLSVTNDQARHQFFSSDFSGKKEQKRPDYSELNRIVRC 553
Query: 466 HFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKNSI 293
+ +PTI +LLAK+RR RFIIP +SI+ER NELMP IS+EIPI+GI +NSI
Sbjct: 554 NLRYPTILYADYDLLAKRRRKRFIIPL--QSIQERENELMPLSGISIEIPINGIFRRNSI 611
Query: 292 LAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEV 113
LA+FDDP+YR +SSGI KY TI ++ I +KEDLIEYRG++EF+PKYQIKVDRFFFIP+EV
Sbjct: 612 LAFFDDPRYRRKSSGITKYGTIEVYPIAKKEDLIEYRGVKEFRPKYQIKVDRFFFIPEEV 671
Query: 112 HILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
HIL +SSSIMVRNNSIIG++T I+L +SRVGGLVRV
Sbjct: 672 HILPKSSSIMVRNNSIIGIDTQISLTTRSRVGGLVRV 708
[131][TOP]
>UniRef100_A1XK92 RNA polymerase beta chain (Fragment) n=1 Tax=Atherosperma moschatum
RepID=A1XK92_9MAGN
Length = 857
Score = 223 bits (568), Expect = 8e-57
Identities = 126/219 (57%), Positives = 154/219 (70%), Gaps = 27/219 (12%)
Frame = -2
Query: 577 LLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCPD 473
L KDQDQM+ HS+ +R S+ V+N++VR L
Sbjct: 46 LHKDQDQMNVHSVE--RRYISDLSVTNDRVRHKLVSSDPYGKRGGRVLDYSGPDRILSNG 103
Query: 472 HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKN 299
H +F++P I D S+LLAK+RRNRFIIPF +S +ER L+P IS+EIPI+GI+ +N
Sbjct: 104 HWNFIYPAILHDNSDLLAKRRRNRFIIPF--QSDQEREKALIPCSGISIEIPINGILRRN 161
Query: 298 SILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQ 119
SILAYFDDP+YR SSGI KY TIG+ SI +KEDLIEYRG +EF+PKYQ+KVDRFFFIP+
Sbjct: 162 SILAYFDDPRYRRSSSGITKYGTIGVDSIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIPE 221
Query: 118 EVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
EVHIL SS IMVRNNSIIGV+T I LN +SRVGGLVRV
Sbjct: 222 EVHILPGSSPIMVRNNSIIGVDTRIALNTRSRVGGLVRV 260
[132][TOP]
>UniRef100_A1XK71 RNA polymerase beta chain (Fragment) n=1 Tax=Carludovica palmata
RepID=A1XK71_9LILI
Length = 844
Score = 223 bits (568), Expect = 8e-57
Identities = 121/218 (55%), Positives = 153/218 (70%), Gaps = 25/218 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-----------------------LCPDH 470
SL KDQDQM+ HS +R S+F ++NN+VR + H
Sbjct: 30 SLHKDQDQMNVHSFSVEERYISDFSMTNNRVRQKLLGTYGKKDREIREYSRPDRIISNGH 89
Query: 469 CHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKNS 296
+F++P+ + S+ LAK+RRNRFIIP + +ER EL+P IS+EIPI+GI+ +NS
Sbjct: 90 WNFIYPSTLHENSDFLAKRRRNRFIIPLQYD--QEREKELIPCFGISIEIPINGILRRNS 147
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQE 116
ILAYFDDP+YR SSGI KY TIG+ S+ +KEDLIEYRG +EF+ KYQ+KVDRFFFIP+E
Sbjct: 148 ILAYFDDPRYRRSSSGITKYGTIGVDSMIKKEDLIEYRGAKEFRTKYQMKVDRFFFIPEE 207
Query: 115 VHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
VHIL SSSIMVRNNSIIGV+T + LN +SRVGGLVRV
Sbjct: 208 VHILPGSSSIMVRNNSIIGVDTRLALNTRSRVGGLVRV 245
[133][TOP]
>UniRef100_Q33C48 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Nicotiana
tomentosiformis RepID=RPOC2_NICTO
Length = 1392
Score = 223 bits (568), Expect = 8e-57
Identities = 120/220 (54%), Positives = 152/220 (69%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
S+ KDQDQM+ H L +R TSN V+N+Q R +C
Sbjct: 494 SIHKDQDQMNAHFLSGKRRYTSNLSVTNDQARQKLFSSDFSVKKEDRIPDYSDLNRIICA 553
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
+ ++ I + S+LL+K+RRN+FIIP SI+E NELMP IS+EIP++GI +
Sbjct: 554 GQYNLVYSPILHENSDLLSKRRRNKFIIPL--HSIQELENELMPCSGISIEIPVNGIFRR 611
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR +SSGI KY T+ HS+ +KEDL+EYRG++EF PKYQ+KVD FFFIP
Sbjct: 612 NSILAYFDDPRYRRKSSGIIKYGTVETHSVIKKEDLLEYRGVKEFSPKYQMKVDLFFFIP 671
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSSIMVRNNSI+GV+T ITLN +SRVGGLVRV
Sbjct: 672 EEVHILPGSSSIMVRNNSIVGVDTQITLNLRSRVGGLVRV 711
[134][TOP]
>UniRef100_A9XWA1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ochna mossambicensis
RepID=A9XWA1_9ROSI
Length = 1268
Score = 223 bits (567), Expect = 1e-56
Identities = 125/220 (56%), Positives = 155/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------LCPD---------- 473
SL KDQDQM+ HSL + ++ + V+N+Q++ + PD
Sbjct: 462 SLHKDQDQMNVHSLSVERISSPS--VNNDQLKHKFFSSDLSGKKQSVIPDSSELNQIIWT 519
Query: 472 -HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
HC+ ++P I + S+LLAK+RRNRFIIPF +SI+ER ELM IS+EIPI+GI +
Sbjct: 520 GHCNLIYPAIPHENSDLLAKRRRNRFIIPF--QSIQERAKELMSHSGISIEIPINGIFRR 577
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSI AYFDDPQYR +SSGI KY IG HSI +KEDL+EY ++EFKPKYQ+KVD FFFIP
Sbjct: 578 NSIFAYFDDPQYRRRSSGITKYGGIGAHSIVKKEDLVEYGRVKEFKPKYQMKVDHFFFIP 637
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EV I SE SS+MVRNNSIIGVNT ITLN +SRVGGLVRV
Sbjct: 638 EEVFIFSEFSSLMVRNNSIIGVNTQITLNTRSRVGGLVRV 677
[135][TOP]
>UniRef100_A6YAM1 RNA polymerase beta' subunit (Fragment) n=1 Tax=Sedum rubrotinctum
RepID=A6YAM1_SEDRU
Length = 854
Score = 223 bits (567), Expect = 1e-56
Identities = 123/222 (55%), Positives = 149/222 (67%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVRLCP------------------------- 476
SL KDQDQ++ HS +R SN V+N QV+ P
Sbjct: 41 SLHKDQDQLNIHSRSVERRYNSNRSVTNEQVKSKPFRWDISGKNEGTLPVYSELNKIIYT 100
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELM----PDISVEIPIDGII 308
HC+ +P I + S LL+K+R NR IIPF +SI+ER E+M DI VEIPI+GI
Sbjct: 101 GHCNIRYPAILYENSTLLSKRRSNRLIIPF--QSIQERKKEIMLDSDSDILVEIPINGIF 158
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+NSI AYFDDPQYR SSGI KY T +HSI +KEDL++YRG +EFKPKYQ+KVDRFFF
Sbjct: 159 RRNSIFAYFDDPQYRRNSSGITKYGTTEVHSIVKKEDLVDYRGAKEFKPKYQMKVDRFFF 218
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHIL SSSIMVRNNSIIG +T ITLN++SRVGGLVR+
Sbjct: 219 IPEEVHILPGSSSIMVRNNSIIGGDTLITLNRRSRVGGLVRI 260
[136][TOP]
>UniRef100_A1XKB1 RNA polymerase beta chain (Fragment) n=1 Tax=Daphnandra micrantha
RepID=A1XKB1_9MAGN
Length = 824
Score = 223 bits (567), Expect = 1e-56
Identities = 126/220 (57%), Positives = 154/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
S+ KDQDQM+ HS +R S+ V+N++VR L
Sbjct: 18 SIHKDQDQMNVHS--AERRYISDLSVTNDRVRHKLFSSDLYGKKKGGVLDYSGPDRILSN 75
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
H +F++P I D S+LLAK+RRNRFIIPF +S +ER EL+P IS+EIPI+GI+ +
Sbjct: 76 GHWNFIYPAILHDNSDLLAKRRRNRFIIPF--QSDQEREKELIPCSGISIEIPINGILRR 133
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR SSGI KY TIG+ SI +KEDLIEYR +EF+PKYQ+KVDRFFFIP
Sbjct: 134 NSILAYFDDPRYRRSSSGITKYGTIGVDSIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIP 193
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SS IMVRNNSIIGV+T I LN +SRVGGLVRV
Sbjct: 194 EEVHILPGSSPIMVRNNSIIGVDTRIALNTRSRVGGLVRV 233
[137][TOP]
>UniRef100_A1XK06 RNA polymerase beta chain (Fragment) n=1 Tax=Vitis sp. Qiu 94046
RepID=A1XK06_9MAGN
Length = 844
Score = 223 bits (567), Expect = 1e-56
Identities = 127/220 (57%), Positives = 151/220 (68%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
S+ KDQDQMS SL +R SN V+N+QV +
Sbjct: 21 SIHKDQDQMSVRSLSVERRYISNPSVTNDQVIHEFFSSDLSGKKEGRIPAYSELNRIIYT 80
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
+ + P I + S+LLAK+RRNRFIIPF +SI+E ELMP IS+EIPI+GI +
Sbjct: 81 GRYNLIDPAILHENSDLLAKRRRNRFIIPF--QSIQEGEKELMPPSGISIEIPINGIFRR 138
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR SSGI KY TI HSI +KEDLIEYRG++EFKPKYQ+KVDRFFFIP
Sbjct: 139 NSILAYFDDPRYRRNSSGITKYGTIEAHSIVKKEDLIEYRGVKEFKPKYQMKVDRFFFIP 198
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL S+SIMVRNNSIIGV+T ITLN +SRV GLVRV
Sbjct: 199 EEVHILPGSASIMVRNNSIIGVDTRITLNTRSRVSGLVRV 238
[138][TOP]
>UniRef100_Q0ZJ30 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Vitis vinifera
RepID=RPOC2_VITVI
Length = 1394
Score = 223 bits (567), Expect = 1e-56
Identities = 127/220 (57%), Positives = 151/220 (68%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
S+ KDQDQMS SL +R SN V+N+QV +
Sbjct: 494 SIHKDQDQMSVRSLSVERRYISNPSVTNDQVIHEFFSSDLSGKKEGRIPAYSELNRIIYT 553
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
+ + P I + S+LLAK+RRNRFIIPF +SI+E ELMP IS+EIPI+GI +
Sbjct: 554 GRYNLIDPAILHENSDLLAKRRRNRFIIPF--QSIQEGEKELMPPSGISIEIPINGIFRR 611
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR SSGI KY TI HSI +KEDLIEYRG++EFKPKYQ+KVDRFFFIP
Sbjct: 612 NSILAYFDDPRYRRNSSGITKYGTIEAHSIVKKEDLIEYRGVKEFKPKYQMKVDRFFFIP 671
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL S+SIMVRNNSIIGV+T ITLN +SRV GLVRV
Sbjct: 672 EEVHILPGSASIMVRNNSIIGVDTRITLNTRSRVSGLVRV 711
[139][TOP]
>UniRef100_Q0G9X2 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Daucus carota
RepID=RPOC2_DAUCA
Length = 1390
Score = 223 bits (567), Expect = 1e-56
Identities = 126/217 (58%), Positives = 152/217 (70%), Gaps = 24/217 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVRLC--------------PDH--------C 467
S+ KDQDQM+ S KR+ SN V+N+QVR PD+ C
Sbjct: 494 SIHKDQDQMNARSFSVKKRSISNLSVTNDQVRHKFFSSDFFGKKEEEHPDYSELNRIVRC 553
Query: 466 HFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHKNSI 293
+ +PTI +LLAK+RR RFIIP +SI+ER NELMP IS+EIPI+GI NSI
Sbjct: 554 NLRYPTIPYADYDLLAKRRRKRFIIPL--QSIQERENELMPPSGISIEIPINGIFRINSI 611
Query: 292 LAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEV 113
LA+FDDP+YR +SSGI KY TI + I +KEDLIEYRG++EFKPKYQIKVDRFFFIP+E+
Sbjct: 612 LAFFDDPRYRRKSSGITKYGTIEVDPIAKKEDLIEYRGVKEFKPKYQIKVDRFFFIPEEM 671
Query: 112 HILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
HIL SSSIMVRNNSIIG++T I L +SRVGGLVRV
Sbjct: 672 HILPGSSSIMVRNNSIIGIDTQIALTTRSRVGGLVRV 708
[140][TOP]
>UniRef100_A1XKA0 RNA polymerase beta chain (Fragment) n=1 Tax=Canella winterana
RepID=A1XKA0_CANWI
Length = 762
Score = 222 bits (566), Expect = 1e-56
Identities = 120/218 (55%), Positives = 149/218 (68%), Gaps = 25/218 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSN---------------NQVRLCPD--------- 473
S+ KDQDQM+ HSL +R++S+ V+N N VR+ D
Sbjct: 14 SIHKDQDQMNVHSLSVEQRDSSDLSVTNDRLRHKLFSSDPSSKNGVRILDDFGPASIISN 73
Query: 472 -HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISVEIPIDGIIHKNS 296
H +FM P I + S+ LAK+RRNRF+IPF + RE+ IS+EIPI+GI+ +NS
Sbjct: 74 GHSNFMDPAIIYENSDFLAKRRRNRFVIPFQYDQEREKELMFPSAISIEIPINGILRRNS 133
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQE 116
ILAY DDP+YR SSGI KY T+ + SI +KEDLIEYRG +E PKYQ+KVDRFFFIP+E
Sbjct: 134 ILAYLDDPRYRRSSSGITKYGTVEVDSIVKKEDLIEYRGAKELSPKYQMKVDRFFFIPEE 193
Query: 115 VHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
VHIL SSS+MVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 194 VHILPASSSVMVRNNSIIGVDTRITLNTRSRVGGLVRV 231
[141][TOP]
>UniRef100_A1XK21 RNA polymerase beta chain (Fragment) n=1 Tax=Cocculus trilobus
RepID=A1XK21_9MAGN
Length = 865
Score = 222 bits (566), Expect = 1e-56
Identities = 122/219 (55%), Positives = 151/219 (68%), Gaps = 27/219 (12%)
Frame = -2
Query: 577 LLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCPD 473
L KDQDQM+ HSL + SN V+N+QVR +C
Sbjct: 46 LHKDQDQMNVHSLSAERSYISNLSVTNDQVRHKLFSSDPSGKKAGRILDYSGSDQIICKG 105
Query: 472 HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKN 299
HC+F++P S+LLAK+RRNRFIIPF RS +E+ EL+P IS+EIPI+GI +N
Sbjct: 106 HCNFIYPATLHADSDLLAKRRRNRFIIPF--RSNQEQEKELIPRSGISMEIPINGIFRRN 163
Query: 298 SILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQ 119
SILAYFDDP+YR SSG+ KY T G+HSI +K+ LIEYRG +EF+ KYQ K+DRFFFIP+
Sbjct: 164 SILAYFDDPRYRRNSSGVTKYGTRGVHSIVKKQYLIEYRGTKEFRSKYQKKIDRFFFIPE 223
Query: 118 EVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
EVHIL SSSIMV+NNSIIGV+T IT N +S+VGGLVRV
Sbjct: 224 EVHILPGSSSIMVQNNSIIGVDTRITFNIRSQVGGLVRV 262
[142][TOP]
>UniRef100_A1XK12 RNA polymerase beta chain (Fragment) n=1 Tax=Tetracentron sinense
RepID=A1XK12_9MAGN
Length = 792
Score = 222 bits (566), Expect = 1e-56
Identities = 113/163 (69%), Positives = 136/163 (83%), Gaps = 2/163 (1%)
Frame = -2
Query: 484 LCPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGI 311
+C HC+F++P I + S+LLAK+RRNRFIIPF +S +ER ELMP IS+EIPI+GI
Sbjct: 32 ICNGHCNFIYPAILHENSDLLAKRRRNRFIIPF--QSNQEREKELMPRSGISIEIPINGI 89
Query: 310 IHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFF 131
+NSILAYFDDP+YR +SSGI KY TI +HSI +KEDLIEYRG +EF+PKYQ+KVDRFF
Sbjct: 90 FRRNSILAYFDDPRYRRKSSGITKYGTIEVHSIVKKEDLIEYRGAKEFRPKYQMKVDRFF 149
Query: 130 FIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
FIP+EV+IL SSSIMVRNNSIIGV+T I LN +SRVGGLVRV
Sbjct: 150 FIPEEVYILPGSSSIMVRNNSIIGVDTRIALNTRSRVGGLVRV 192
[143][TOP]
>UniRef100_A9XW90 DNA-directed RNA polymerase (Fragment) n=1 Tax=Krameria lanceolata
RepID=A9XW90_9ROSI
Length = 1027
Score = 222 bits (565), Expect = 2e-56
Identities = 126/224 (56%), Positives = 158/224 (70%), Gaps = 31/224 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNF-LVSNNQVR--------------------------- 485
SL KDQDQMS +SL +R +S +V+N+QVR
Sbjct: 457 SLHKDQDQMSXNSLSVEERYSSRLSVVNNDQVRYQFFSSDFYGKKESSISIPDYSGLKKI 516
Query: 484 LCPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGI 311
+C HC+ ++ I + S+LLAK+RR RFIIPF +SI ER+ ELM IS+EIP +GI
Sbjct: 517 ICIGHCNLIYSAIIHENSHLLAKRRRKRFIIPF--QSIPERDKELMTRSGISIEIPPNGI 574
Query: 310 IHKNSILAYFDDPQYRTQSSGIAKY-KTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRF 134
+NSILAYFDDPQYR +SSGI+KY TIG+HSI +KED IEYRG++EF+PKYQ++VD+F
Sbjct: 575 FCRNSILAYFDDPQYRRKSSGISKYGATIGVHSIVKKEDWIEYRGVKEFQPKYQMEVDKF 634
Query: 133 FFIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
FFIP+EV+IL ESSSIMVRNNS+IGVNT I NK+SRVGG VRV
Sbjct: 635 FFIPEEVYILPESSSIMVRNNSLIGVNTRIAFNKRSRVGGFVRV 678
[144][TOP]
>UniRef100_A1XKF7 RNA polymerase beta chain (Fragment) n=1 Tax=Laurus nobilis
RepID=A1XKF7_9MAGN
Length = 760
Score = 222 bits (565), Expect = 2e-56
Identities = 124/216 (57%), Positives = 154/216 (71%), Gaps = 26/216 (12%)
Frame = -2
Query: 571 KDQDQMSTHSLPTAKRNTSNFLVSNNQVR------------------------LCPDHCH 464
KDQDQM+ HS+ +R+ S+ V+N+QVR + H +
Sbjct: 2 KDQDQMNVHSVE--RRSISDLSVTNDQVRHKLFSSNPYGKKGGVLDYSGPDRIISNGHWN 59
Query: 463 FMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKNSIL 290
F++PTI + S+LLAK+RRNRFIIPF +S +ER ELMP IS+EIPI+G++ +NSIL
Sbjct: 60 FIYPTILHENSDLLAKRRRNRFIIPF--QSDQEREKELMPRSGISIEIPINGVLPRNSIL 117
Query: 289 AYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEVH 110
AYFDDP YR SSGI KY TIG+ SI +KEDLIEYR +EF+PKYQ+KVDRFFFIP+EVH
Sbjct: 118 AYFDDPLYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVH 177
Query: 109 ILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IL SS IMVRNNSIIGV+T I LN +S+VGGLVRV
Sbjct: 178 ILPGSSPIMVRNNSIIGVDTRIALNTRSQVGGLVRV 213
[145][TOP]
>UniRef100_A1XKE4 RNA polymerase beta chain (Fragment) n=1 Tax=Sanguinaria canadensis
RepID=A1XKE4_SANCA
Length = 853
Score = 222 bits (565), Expect = 2e-56
Identities = 123/220 (55%), Positives = 154/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HS +R S+ V+ +QV+ +C
Sbjct: 41 SLRKDQDQMNVHSFFAERRYMSSLSVTKDQVKDKLFSSESSGKSGRGVLDYSGPDRIICN 100
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
HC+F++P + S LLAK+RRNRFIIP +S +ER+ EL+P IS+EIP++GI +
Sbjct: 101 GHCNFIYPATLHENSYLLAKRRRNRFIIPL--QSNQERDKELIPRSGISIEIPLNGIFRR 158
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDD +YR +SSGI KY+TI +HSI +KEDLIEYR +EF+ KYQ KVDRFFFIP
Sbjct: 159 NSILAYFDDLRYRRKSSGITKYETIEMHSIVKKEDLIEYRRAKEFRQKYQKKVDRFFFIP 218
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHILSESSSIMV+NNSIIGV+T IT N +SRVGGLVRV
Sbjct: 219 EEVHILSESSSIMVQNNSIIGVDTRITFNIRSRVGGLVRV 258
[146][TOP]
>UniRef100_Q14FG7 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Populus alba
RepID=RPOC2_POPAL
Length = 1390
Score = 222 bits (565), Expect = 2e-56
Identities = 120/220 (54%), Positives = 154/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR---------------------------L 482
SL KDQDQ++ HSL + SN +N++V+ +
Sbjct: 490 SLHKDQDQINVHSLSVERGYISNPSENNDKVKHKFFSSYLSSKSKKKSRILDYSDLNRII 549
Query: 481 CPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISVEIPIDGIIHK 302
C F++PTI + S+LLAK+R+NRFIIPF +SI+E+ DI +EIPI+GI +
Sbjct: 550 CTG---FIYPTILHENSDLLAKRRKNRFIIPF--QSIQEKELMSHSDILIEIPINGIFRR 604
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSI AYFDDPQYR +SSGI KY IG+HSI +KEDL+EYRG++EF+PKYQ+KVDRFFFIP
Sbjct: 605 NSIFAYFDDPQYRRKSSGITKYVAIGVHSIVKKEDLVEYRGVKEFQPKYQMKVDRFFFIP 664
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EV+IL ESSS+MVRNNSIIGV+T ITLN KSRVGGL+R+
Sbjct: 665 EEVYILPESSSLMVRNNSIIGVDTQITLNTKSRVGGLIRI 704
[147][TOP]
>UniRef100_UPI0001985CBF PREDICTED: similar to RNA polymerase beta subunit, partial n=1
Tax=Vitis vinifera RepID=UPI0001985CBF
Length = 650
Score = 221 bits (564), Expect = 2e-56
Identities = 126/220 (57%), Positives = 151/220 (68%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
S+ KDQDQMS SL +R SN V+N+QV +
Sbjct: 20 SIHKDQDQMSVRSLSVERRYISNPSVTNDQVIHEFFSSDLSGKKEGRIPAYSELNRIIYT 79
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
+ + P I + S+LLAK+RRNRFIIPF +SI+E ELMP IS+EIPI+GI +
Sbjct: 80 GRYNLIDPAILHENSDLLAKRRRNRFIIPF--QSIQEGEKELMPPSGISIEIPINGIFRR 137
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR SSGI KY TI HSI +KEDLIEYRG++EFKPKYQ+KVDRFFFIP
Sbjct: 138 NSILAYFDDPRYRRNSSGITKYGTIEAHSIVKKEDLIEYRGVKEFKPKYQMKVDRFFFIP 197
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL S+SIM+RNNSIIGV+T ITLN +SRV GLVRV
Sbjct: 198 EEVHILPGSASIMLRNNSIIGVDTRITLNTRSRVSGLVRV 237
[148][TOP]
>UniRef100_A6YAK6 RNA polymerase beta' subunit (Fragment) n=1 Tax=Haloragis aspera
RepID=A6YAK6_9MAGN
Length = 841
Score = 221 bits (564), Expect = 2e-56
Identities = 120/222 (54%), Positives = 152/222 (68%), Gaps = 30/222 (13%)
Frame = -2
Query: 577 LLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------------------LCP 476
L KDQDQ++ HS+ +R+ SN V+N+QVR +C
Sbjct: 42 LHKDQDQINVHSVSVERRSISNISVTNDQVRHKIYSSVLSSGKKEGRIPDYSELNRIICT 101
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDI----SVEIPIDGII 308
+C+ + P+I + LAK+RRNRFIIPF +SI+ER+ E +P I S+EIP +GI+
Sbjct: 102 SNCNLIDPSILHHNYDFLAKRRRNRFIIPF--QSIQERDKEQIPHIDSGISIEIPRNGIL 159
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+NSILA+FDDPQYR SSGI KY T+ +HSI +KE IEYRG++EF P+YQ+KVDRFFF
Sbjct: 160 RRNSILAFFDDPQYRRNSSGITKYGTLEVHSIVKKEYFIEYRGVKEFPPRYQMKVDRFFF 219
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVH LS SSSIMVRNNSII V T ITLN +SRVGGLVRV
Sbjct: 220 IPEEVHFLSGSSSIMVRNNSIIAVGTQITLNTRSRVGGLVRV 261
[149][TOP]
>UniRef100_A1XK82 RNA polymerase beta chain (Fragment) n=1 Tax=Blandfordia
grandiflora RepID=A1XK82_9ASPA
Length = 856
Score = 221 bits (564), Expect = 2e-56
Identities = 120/218 (55%), Positives = 151/218 (69%), Gaps = 25/218 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-----------------------LCPDH 470
SL KDQDQM+ HS +R S+ ++NN+VR + H
Sbjct: 40 SLHKDQDQMNVHSFSVEERYISDLSMTNNRVRNKFLDTSSKKDGEILDYSRPDRIISNGH 99
Query: 469 CHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKNS 296
+F++P+I + S L+K+RRNRFIIP + +ER EL+P IS+EIPI+GI+ +NS
Sbjct: 100 WNFIYPSIFQENSYFLSKRRRNRFIIPLQYD--QEREKELIPCFGISIEIPINGILRRNS 157
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQE 116
ILAYFDDP+YR SSGI KY T+ + SI +KEDLIEYRG +EF PKYQ+KVDRFFFIP+E
Sbjct: 158 ILAYFDDPRYRRSSSGITKYGTVEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEE 217
Query: 115 VHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
VHIL SSSIMV+NNSIIG+NT + LN KSRVGGLVRV
Sbjct: 218 VHILPGSSSIMVQNNSIIGINTRLALNTKSRVGGLVRV 255
[150][TOP]
>UniRef100_B0Z545 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Oenothera
glazioviana RepID=RPOC2_OENGL
Length = 1383
Score = 221 bits (564), Expect = 2e-56
Identities = 117/221 (52%), Positives = 154/221 (69%), Gaps = 28/221 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------------------LC 479
SL KDQDQM+ S +R S+ +N+Q+R +C
Sbjct: 490 SLHKDQDQMNPRSTERERRYLSSLSANNDQIRYKFFSSSFSGKKKDDRSPGYSEMNRIIC 549
Query: 478 PDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIH 305
HC+ ++P+I + S+LLAK+RRNR +IP +S +ER EL+P IS+E+PI+GI
Sbjct: 550 TLHCNLIYPSILRENSDLLAKRRRNRLVIPV--QSSQEREKELIPHSGISIELPINGIFR 607
Query: 304 KNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFI 125
K SILA+FDDP+YRT+SSGI +Y+T+G+HSI +KE L++YRGI EFKPKYQ+ +DRFFFI
Sbjct: 608 KKSILAFFDDPRYRTKSSGITQYETMGMHSIVKKEGLVDYRGINEFKPKYQMTIDRFFFI 667
Query: 124 PQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
P+EVHIL ESSSIMVRNNS+IGV+T I LN +SR GGLVRV
Sbjct: 668 PEEVHILPESSSIMVRNNSLIGVDTRIALNTRSRAGGLVRV 708
[151][TOP]
>UniRef100_Q9MTM3 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Oenothera elata
subsp. hookeri RepID=RPOC2_OENEH
Length = 1383
Score = 221 bits (564), Expect = 2e-56
Identities = 117/221 (52%), Positives = 154/221 (69%), Gaps = 28/221 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------------------LC 479
SL KDQDQM+ S +R S+ +N+Q+R +C
Sbjct: 490 SLHKDQDQMNPRSTERERRYLSSLSANNDQIRYKFFSSSFSGKKKDDRSPGYSEMNRIIC 549
Query: 478 PDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIH 305
HC+ ++P+I + S+LLAK+RRNR +IP +S +ER EL+P IS+E+PI+GI
Sbjct: 550 TLHCNLIYPSILRENSDLLAKRRRNRLVIPV--QSSQEREKELIPHSGISIELPINGIFR 607
Query: 304 KNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFI 125
K SILA+FDDP+YRT+SSGI +Y+T+G+HSI +KE L++YRGI EFKPKYQ+ +DRFFFI
Sbjct: 608 KKSILAFFDDPRYRTKSSGITQYETMGMHSIVKKEGLVDYRGINEFKPKYQMTIDRFFFI 667
Query: 124 PQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
P+EVHIL ESSSIMVRNNS+IGV+T I LN +SR GGLVRV
Sbjct: 668 PEEVHILPESSSIMVRNNSLIGVDTRIALNTRSRAGGLVRV 708
[152][TOP]
>UniRef100_B0Z4W1 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Oenothera biennis
RepID=RPOC2_OENBI
Length = 1383
Score = 221 bits (564), Expect = 2e-56
Identities = 117/221 (52%), Positives = 154/221 (69%), Gaps = 28/221 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------------------LC 479
SL KDQDQM+ S +R S+ +N+Q+R +C
Sbjct: 490 SLHKDQDQMNPRSTERERRYLSSLSANNDQIRYKFFSSSFSGKKKDDRSPGYSEMNRIIC 549
Query: 478 PDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIH 305
HC+ ++P+I + S+LLAK+RRNR +IP +S +ER EL+P IS+E+PI+GI
Sbjct: 550 TLHCNLIYPSILRENSDLLAKRRRNRLVIPV--QSSQEREKELIPHSGISIELPINGIFR 607
Query: 304 KNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFI 125
K SILA+FDDP+YRT+SSGI +Y+T+G+HSI +KE L++YRGI EFKPKYQ+ +DRFFFI
Sbjct: 608 KKSILAFFDDPRYRTKSSGITQYETMGMHSIVKKEGLVDYRGINEFKPKYQMTIDRFFFI 667
Query: 124 PQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
P+EVHIL ESSSIMVRNNS+IGV+T I LN +SR GGLVRV
Sbjct: 668 PEEVHILPESSSIMVRNNSLIGVDTRIALNTRSRAGGLVRV 708
[153][TOP]
>UniRef100_A9XW91 DNA-directed RNA polymerase (Fragment) n=1 Tax=Leea guineensis
RepID=A9XW91_LEEGU
Length = 1260
Score = 221 bits (563), Expect = 3e-56
Identities = 126/222 (56%), Positives = 151/222 (68%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQV---------------------------RL 482
S+ KDQDQMS SL +R TS V+N+QV
Sbjct: 445 SIHKDQDQMSVRSLSVERRYTS---VTNDQVIHGFFSSDLSGKKEGRIPAYSELNRIIYT 501
Query: 481 CPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGII 308
C+ + P I + S+LLAK+RRNRFIIPF +SI+ER ELMP IS+EIPI+GI
Sbjct: 502 YTGRCNLIDPAILHENSDLLAKRRRNRFIIPF--QSIQEREKELMPPSGISIEIPINGIF 559
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+NSILAYFDD +YR SSGI KY TI +HSI +KEDLIEYRG++EFKPKYQ+KVDRFFF
Sbjct: 560 RRNSILAYFDDARYRRNSSGITKYGTIEVHSIVKKEDLIEYRGVKEFKPKYQMKVDRFFF 619
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHIL S+SIMVR NSIIGV+T I LN +SR+GGLVRV
Sbjct: 620 IPEEVHILPGSASIMVRTNSIIGVDTRIALNTRSRIGGLVRV 661
[154][TOP]
>UniRef100_A1XKB0 RNA polymerase beta chain (Fragment) n=1 Tax=Euphorbia milii var.
splendens RepID=A1XKB0_EUPMI
Length = 814
Score = 221 bits (563), Expect = 3e-56
Identities = 119/225 (52%), Positives = 156/225 (69%), Gaps = 32/225 (14%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTS-----NFLVSNNQVR----------------------- 485
SL KDQDQM+ HSL +R S N + N+QV+
Sbjct: 15 SLHKDQDQMNLHSLSVKRRENSSPSLNNDPLKNDQVKHQFFSSDLVAKKESRIPDYSGLN 74
Query: 484 --LCPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPID 317
+C HC+ ++P I + S+LLAK+RRN+FIIPF +SI+ER E M IS+EIPI+
Sbjct: 75 RIICTGHCNLIYPPILYENSDLLAKRRRNKFIIPF--QSIQEREKEQMTYSTISIEIPIN 132
Query: 316 GIIHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDR 137
GI +NS+ +YFDDPQY+ +SSGI KY IG+HSI +KEDLI Y+G++EFKPKYQ++VDR
Sbjct: 133 GIFRRNSVFSYFDDPQYQRKSSGITKYGAIGVHSIVKKEDLIAYQGVKEFKPKYQMQVDR 192
Query: 136 FFFIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
FFFIP+EV+IL ESSS+MVRNNS++GV+T I+LN +SR GGLVRV
Sbjct: 193 FFFIPEEVYILPESSSLMVRNNSLVGVDTQISLNTRSRGGGLVRV 237
[155][TOP]
>UniRef100_A1XK64 RNA polymerase beta chain (Fragment) n=1 Tax=Spathiphyllum wallisii
RepID=A1XK64_SPAWA
Length = 856
Score = 221 bits (563), Expect = 3e-56
Identities = 118/220 (53%), Positives = 149/220 (67%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQ++ HS +R S+ V+N+ R +
Sbjct: 38 SLHKDQDQINVHSFSLEERYISDLSVTNDPARHKFFSSDSSSKKKGGTLYYSRPDRSISN 97
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
DH +F +P+I + S+ LAK+RRNR IIP + RER E +P +S+EIPI+GI+ +
Sbjct: 98 DHWNFKYPSILHENSDFLAKRRRNRLIIPLQYDQEREREKEPIPRFGVSIEIPINGILRR 157
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR SSGI KY T+ + SI +KEDLIEYRG +EF PKYQ+KVDRFFFIP
Sbjct: 158 NSILAYFDDPRYRRNSSGITKYGTVEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIP 217
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVH+L SS IMVRNNSIIGV+TP+TLN +SRVGGLVRV
Sbjct: 218 EEVHVLPGSSLIMVRNNSIIGVDTPLTLNTRSRVGGLVRV 257
[156][TOP]
>UniRef100_A1XKC8 RNA polymerase beta chain (Fragment) n=1 Tax=Ascarina sp. Thien 500
RepID=A1XKC8_9MAGN
Length = 804
Score = 221 bits (562), Expect = 4e-56
Identities = 124/222 (55%), Positives = 154/222 (69%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ H L +R+ S+ V+N++VR +
Sbjct: 19 SLHKDQDQMNAHFLSVERRSISDLSVTNDRVRHKLFSSYLSGKKRRGIIDYSGPDRIISN 78
Query: 475 DHCHF--MHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGII 308
HCH+ ++P I + S+LLAK+RRNRFIIPF + +ER EL+P IS+EIPI+GI+
Sbjct: 79 GHCHWNLIYPAILHENSDLLAKRRRNRFIIPFEYD--QEREKELVPRSGISIEIPINGIL 136
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+ SILAYFDDP+YR SSGI KY TI + SI +KEDLIEYRG +EF+ KYQ+KVDRFFF
Sbjct: 137 RRKSILAYFDDPRYRGSSSGITKYGTIEVDSIVKKEDLIEYRGTKEFRSKYQMKVDRFFF 196
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHIL SSSIMVRNNSIIGV+T I LN +SRVGGLVRV
Sbjct: 197 IPEEVHILPGSSSIMVRNNSIIGVDTRIALNTRSRVGGLVRV 238
[157][TOP]
>UniRef100_Q4VZP3 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Cucumis sativus
RepID=RPOC2_CUCSA
Length = 1394
Score = 221 bits (562), Expect = 4e-56
Identities = 125/222 (56%), Positives = 152/222 (68%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQ++ HSL +R S+ V+N++V LC
Sbjct: 494 SLYKDQDQINVHSLCVERRYISSLSVNNDKVGQKFYGPDLSGKNENGIPDYSELNPILCT 553
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
+ +P I S+LLAK+RRN FII F S++ER EL P IS+EIPI+GI +
Sbjct: 554 GQSNLTYPAIFHGNSDLLAKRRRNGFIIQF--ESLQEREKELRPPSGISIEIPINGIFRR 611
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKY--QIKVDRFFF 128
NSILA+FDDPQYR SSGI KY TIG+HSI +KEDLIEYRG+++FKPKY Q+KVDRFFF
Sbjct: 612 NSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFF 671
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHIL ESSSIMVRNNSIIGV T +TL+ +SRVGGLVRV
Sbjct: 672 IPEEVHILPESSSIMVRNNSIIGVATRLTLSIRSRVGGLVRV 713
[158][TOP]
>UniRef100_A9XWB3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Schinus
terebinthifolius RepID=A9XWB3_9ROSI
Length = 1281
Score = 220 bits (561), Expect = 5e-56
Identities = 121/220 (55%), Positives = 154/220 (70%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVRL--------------CPDH--------- 470
SL DQD+++ SL +R SN V+N+Q R PD+
Sbjct: 461 SLHTDQDEINIDSLSVERRFFSNLSVNNDQARHKLFSSDFSDKKEGGIPDYSGFNRTIGT 520
Query: 469 --CHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
C+ +HP I S+LLAK+RRNRF+IPF +SI+E+ EL+P IS++IPI GI +
Sbjct: 521 GPCNLLHPAIFHKHSDLLAKRRRNRFLIPF--QSIQEQEKELLPLSGISIDIPIKGIFRR 578
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR +SSGI KY TIG HSI +KEDLIEYRG+++ KPKYQ+K+DRFFFIP
Sbjct: 579 NSILAYFDDPRYRRKSSGITKYGTIGAHSIVKKEDLIEYRGVKKIKPKYQMKIDRFFFIP 638
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EV+ L ESS +MVRNNSIIGV+TPITL +S+VGGLVRV
Sbjct: 639 EEVYTLPESSYVMVRNNSIIGVDTPITLTIRSQVGGLVRV 678
[159][TOP]
>UniRef100_A9XW99 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neurada procumbens
RepID=A9XW99_9ROSI
Length = 1265
Score = 220 bits (561), Expect = 5e-56
Identities = 118/221 (53%), Positives = 156/221 (70%), Gaps = 28/221 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------------------LC 479
SL KDQDQ++ +SL +R S+ V+N+QVR +
Sbjct: 460 SLHKDQDQLNINSLSVERRYISSLSVNNDQVRYKLFRSVFSEKKEGGISYYSELNRIIIG 519
Query: 478 PDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIH 305
H + + IS + S+LLAK+RRNRFIIPF +SI+E++ EL+P IS+EIP +GI
Sbjct: 520 TGHSNLTYSAISYENSDLLAKRRRNRFIIPFQSKSIQEQDKELIPHSGISIEIPTNGIFR 579
Query: 304 KNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFI 125
+NSILA+FDD +YR SSGI KY IG HSI +KED++EYRG+++FKPKYQ+KVDRFFFI
Sbjct: 580 RNSILAFFDDSRYRRNSSGITKYGAIGTHSIVKKEDVLEYRGVKKFKPKYQMKVDRFFFI 639
Query: 124 PQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
P+EVHIL ESSSIMV++NS+IGV+T +TLN +S+VGGLVRV
Sbjct: 640 PEEVHILPESSSIMVQSNSLIGVDTRLTLNTRSQVGGLVRV 680
[160][TOP]
>UniRef100_A6YAL2 RNA polymerase beta' subunit (Fragment) n=1 Tax=Myriophyllum sp.
Broch s.n. RepID=A6YAL2_9MAGN
Length = 805
Score = 220 bits (561), Expect = 5e-56
Identities = 120/221 (54%), Positives = 152/221 (68%), Gaps = 29/221 (13%)
Frame = -2
Query: 577 LLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCPD 473
L KDQDQ+++HS+ R+ SN V+N+QVR +C
Sbjct: 42 LAKDQDQINSHSVSLELRSISNISVTNDQVRQKICSSVLSGKKEGRIPDYSELNRIICTS 101
Query: 472 HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDI----SVEIPIDGIIH 305
+C+ + P+I S+ LAK+RRNRFIIPF +SI+ER+ E + DI S+EIPI+GI
Sbjct: 102 NCNLIDPSILHHNSDFLAKRRRNRFIIPF--QSIQERDKEQILDIDSGISIEIPINGIFG 159
Query: 304 KNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFI 125
+NSILA+FDDPQYR SSGI KY T+ +HSI +KE IEYRG++EF P+YQ+KVD+FFFI
Sbjct: 160 RNSILAFFDDPQYRRNSSGITKYGTLEVHSIVKKEYFIEYRGVKEFPPRYQMKVDQFFFI 219
Query: 124 PQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
P+EVH S SSSIMVRNNSII V T ITLN +SRVGGLVRV
Sbjct: 220 PEEVHFFSGSSSIMVRNNSIIAVGTQITLNTRSRVGGLVRV 260
[161][TOP]
>UniRef100_A1XKC2 RNA polymerase beta chain (Fragment) n=1 Tax=Austrobaileya scandens
RepID=A1XKC2_9MAGN
Length = 835
Score = 220 bits (561), Expect = 5e-56
Identities = 124/220 (56%), Positives = 150/220 (68%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ SL +R SN V+N++VR +
Sbjct: 21 SLHKDQDQMNVQSLSVEQRYISNLSVNNDRVRHKLFDSDPSGKKVGRLFGYSGPDRIISN 80
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
H F++P I + SNLLAK+RRNRFIIPF + +ER EL P I++EIPI+GI+
Sbjct: 81 RHWDFIYPAILHENSNLLAKRRRNRFIIPF--QHDQEREKELTPRSGIAIEIPINGILRI 138
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR SSGI KY TI + SI +KEDLIEYRG +E +PKYQ+KVDRFFFIP
Sbjct: 139 NSILAYFDDPRYRRSSSGITKYGTIEVDSIVKKEDLIEYRGAKELRPKYQMKVDRFFFIP 198
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SS+IMVRNNSIIGV+T I LN KSR+GGLVRV
Sbjct: 199 EEVHILPGSSTIMVRNNSIIGVDTQIALNTKSRIGGLVRV 238
[162][TOP]
>UniRef100_A9XW51 DNA-directed RNA polymerase (Fragment) n=1 Tax=Brexia
madagascariensis RepID=A9XW51_BREMA
Length = 1268
Score = 220 bits (560), Expect = 7e-56
Identities = 121/220 (55%), Positives = 153/220 (69%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
S+ KDQDQ+ + S R S+F +N+QVR +C
Sbjct: 459 SIHKDQDQVHSLSGSGKGRYISSFSGNNDQVRYRFFSSDLSGKNQSKITDYSEHNRIICT 518
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
HC+ ++P I ++S+LLAK+RRNRFIIPF +SI ER ELM DIS+EIPI+GI +
Sbjct: 519 GHCNLIYPPILHESSDLLAKRRRNRFIIPF--QSIPEREKELMSPADISIEIPINGIFRR 576
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
S+ +YFDD +YR + SGI KY TIG+HSI +KEDLIEYRG++EFKPKY++K+DRFFFIP
Sbjct: 577 KSLFSYFDDLKYRRKCSGITKYGTIGVHSILKKEDLIEYRGVKEFKPKYKMKIDRFFFIP 636
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL ESS IMVRNNSII V+T I LN +SRVGGLVRV
Sbjct: 637 EEVHILPESSYIMVRNNSIIRVDTRIALNTRSRVGGLVRV 676
[163][TOP]
>UniRef100_A1XKE1 RNA polymerase beta chain (Fragment) n=1 Tax=Didymeles perrieri
RepID=A1XKE1_9MAGN
Length = 818
Score = 220 bits (560), Expect = 7e-56
Identities = 123/217 (56%), Positives = 151/217 (69%), Gaps = 27/217 (12%)
Frame = -2
Query: 571 KDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCPDHC 467
+DQDQM+ HSL + + N V+NNQVR +C
Sbjct: 3 QDQDQMNLHSLSAER--SYNLSVTNNQVRHKLFSSDPSFKKRSRILDYSGPNQIICNGRL 60
Query: 466 HFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKNSI 293
+F++PT+ D +LLAKKR+NRFIIP +S +ER ELMP IS+EIPI+GI +NSI
Sbjct: 61 NFIYPTMLHDNYDLLAKKRKNRFIIPL--QSNQEREKELMPCSGISIEIPINGIFRRNSI 118
Query: 292 LAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEV 113
LAYFDDP+Y+ SSGI KY T +HSI +KEDLIEY+G +EF PKYQ+KVDRFFFIP+EV
Sbjct: 119 LAYFDDPRYKRNSSGITKYGTREVHSILKKEDLIEYQGKKEFSPKYQMKVDRFFFIPEEV 178
Query: 112 HILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
HIL +SSIMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 179 HILPGASSIMVRNNSIIGVDTQITLNIRSRVGGLVRV 215
[164][TOP]
>UniRef100_A1XK62 RNA polymerase beta chain (Fragment) n=1 Tax=Dillenia indica
RepID=A1XK62_DILIN
Length = 854
Score = 219 bits (559), Expect = 9e-56
Identities = 123/220 (55%), Positives = 151/220 (68%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL ++ SN ++N++VR C
Sbjct: 28 SLHKDQDQMNIHSLSVEQKYISNSSLTNDKVRHKIGNSGFSDKKEGGIPDYSEINRIRCT 87
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
H + ++P I SNLLAK+RRN FIIPF +SI++R EL+P IS+EIPI+ I
Sbjct: 88 SHSNLIYPAILYGNSNLLAKRRRNGFIIPF--QSIQKREKELIPPSGISIEIPINSIFCI 145
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSI AYFDDP+YR +SSGI KY T+ +HSI +KEDLIEYRG++EF+PKYQ K DRFFFIP
Sbjct: 146 NSIYAYFDDPRYRRRSSGITKYGTVEVHSIVKKEDLIEYRGVKEFRPKYQRKGDRFFFIP 205
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SS IMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 206 EEVHILPGSSFIMVRNNSIIGVDTRITLNTRSRVGGLVRV 245
[165][TOP]
>UniRef100_A1XK56 RNA polymerase beta chain (Fragment) n=1 Tax=Orontium aquaticum
RepID=A1XK56_OROAQ
Length = 835
Score = 219 bits (559), Expect = 9e-56
Identities = 119/218 (54%), Positives = 146/218 (66%), Gaps = 25/218 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM HS + +R S+ ++N+ R +
Sbjct: 22 SLHKDQDQMHVHSFSSEERYISDLSMTNDSARHKLFSSDHSSKKRGGITDYSRPDRSISN 81
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISVEIPIDGIIHKNS 296
H + ++P+I + S+ LAK+RRNRFIIP F RE+ IS+EIPI+GI+ KN
Sbjct: 82 GHWNCIYPSILRENSDFLAKRRRNRFIIPLQFDQEREKELISRFGISIEIPINGILRKNG 141
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQE 116
ILAYFDDPQYR SSGI KY T+ + SI +KEDLIEYRG +EF PKYQ+KVDRFFFIP+E
Sbjct: 142 ILAYFDDPQYRRSSSGITKYGTVEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEE 201
Query: 115 VHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
VHIL SSSIMVRNNSIIGV+TP+TLN +SRVGGLVRV
Sbjct: 202 VHILPGSSSIMVRNNSIIGVDTPLTLNTRSRVGGLVRV 239
[166][TOP]
>UniRef100_A1XK47 RNA polymerase beta chain (Fragment) n=1 Tax=Cornus florida
RepID=A1XK47_CORFO
Length = 812
Score = 219 bits (559), Expect = 9e-56
Identities = 118/209 (56%), Positives = 145/209 (69%), Gaps = 27/209 (12%)
Frame = -2
Query: 547 HSLPTAKRNTSNFLVSNNQVR-------------------------LCPDHCHFMHPTIS 443
HSL +R SN V+N+Q R +C HC+ +P I
Sbjct: 2 HSLSVXRRYISNLSVTNDQARHKFFSSDFSGKQQDRIPDYSERNRIICTGHCNLTYPAIF 61
Query: 442 PDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKNSILAYFDDPQ 269
+ S+LLAK+RRNRFIIP +SI+ER + +P IS+EIPI+GI +NSILAYFDDP+
Sbjct: 62 HENSDLLAKRRRNRFIIPL--QSIQERKKKRIPRSGISIEIPINGIFRRNSILAYFDDPR 119
Query: 268 YRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEVHILSESSS 89
YR +SSGI KY TI HSI +KEDLIEYRG++EF+PKYQ+KVDRFFFIP+EVHIL SSS
Sbjct: 120 YRRKSSGITKYGTIEAHSIVKKEDLIEYRGVKEFRPKYQMKVDRFFFIPEEVHILPGSSS 179
Query: 88 IMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IMVRNNS+IGV+T I N +SRVGGLVRV
Sbjct: 180 IMVRNNSLIGVDTQIAFNTRSRVGGLVRV 208
[167][TOP]
>UniRef100_A1XK14 RNA polymerase beta chain (Fragment) n=1 Tax=Sabia sp. Qiu 91025
RepID=A1XK14_9MAGN
Length = 863
Score = 219 bits (559), Expect = 9e-56
Identities = 123/220 (55%), Positives = 148/220 (67%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL DQDQM+ HS +R SN V+ +Q R +C
Sbjct: 45 SLHTDQDQMNIHSFSVEQRYISNPSVTTDQARHKLFSSDPSGKKGGRFLYYSGPDRIICN 104
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELM--PDISVEIPIDGIIHK 302
HC+F++P + S LLAK+RRN FIIPF +S +ER ELM IS+EIPI+GI +
Sbjct: 105 GHCNFIYPPTLHENSYLLAKRRRNGFIIPF--QSTQEREKELMLRSGISIEIPINGIFRR 162
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR SSGI KY TI +HSI +KED IEYR ++EF PKYQ+KVDRFF IP
Sbjct: 163 NSILAYFDDPRYRRNSSGITKYDTIEVHSIAKKEDWIEYRRVKEFSPKYQMKVDRFFCIP 222
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSSIMVRNNS+IGV+T ITLN +SRVGGLVRV
Sbjct: 223 EEVHILLGSSSIMVRNNSLIGVDTRITLNTRSRVGGLVRV 262
[168][TOP]
>UniRef100_A6YAL0 RNA polymerase beta' subunit (Fragment) n=1 Tax=Kalanchoe
daigremontiana RepID=A6YAL0_KALDA
Length = 815
Score = 219 bits (558), Expect = 1e-55
Identities = 121/222 (54%), Positives = 152/222 (68%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQ++ HSL +R + N V++ QV +
Sbjct: 11 SLHKDQDQLNIHSLSVERRYSFNRSVTDEQVEHKFFRSDIYGKKEGNIPVYSEFNQIIYT 70
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD----ISVEIPIDGII 308
C+ ++P I + SNLL+K+R NRFIIPF +SI ER E M D ISVEIPI+GI
Sbjct: 71 GRCNILYPAILYENSNLLSKRRSNRFIIPF--QSINERKKETMLDSDSGISVEIPINGIF 128
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+NSILAYFDDPQYR +SSGI KY T+ +HSI +KEDL++YRG +EFKP+YQ++VDR FF
Sbjct: 129 RRNSILAYFDDPQYRRKSSGITKYGTMEVHSIVKKEDLVDYRGAKEFKPRYQMEVDRLFF 188
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHIL SSSIMVRNNS+IG +T ITLN++SRVGGLVRV
Sbjct: 189 IPEEVHILPGSSSIMVRNNSLIGGDTLITLNRRSRVGGLVRV 230
[169][TOP]
>UniRef100_A1XK20 RNA polymerase beta chain (Fragment) n=1 Tax=Ranunculus sp. Qiu
95024 RepID=A1XK20_9MAGN
Length = 862
Score = 219 bits (558), Expect = 1e-55
Identities = 115/218 (52%), Positives = 148/218 (67%), Gaps = 25/218 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQ++ HS+ ++ SN V+N+QVR LC
Sbjct: 45 SLHKDQDQINIHSISAKPKSISNLSVTNDQVRNKLFRSDPSVKKGGWVLDYSGPAEILCN 104
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISVEIPIDGIIHKNS 296
HC+ ++P I + S+LLAK+RRNRF IP +E+ + IS+EIPI+G+ NS
Sbjct: 105 GHCNLIYPAILDENSDLLAKRRRNRFTIPLQSNQEQEKEQKPHSGISIEIPINGLFRINS 164
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQE 116
ILAYF+DP+YR +SSGI KY T+ + SI +KEDLIEYR +EF+PKYQ+K+DRFFFIP+E
Sbjct: 165 ILAYFEDPRYRRKSSGITKYGTLEVDSIVKKEDLIEYRRTKEFRPKYQMKIDRFFFIPEE 224
Query: 115 VHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
VHIL SSSIM+RNNSIIGV+T IT N +SRVGGLVRV
Sbjct: 225 VHILPGSSSIMIRNNSIIGVDTQITFNIRSRVGGLVRV 262
[170][TOP]
>UniRef100_A1XK07 RNA polymerase beta chain (Fragment) n=1 Tax=Leea guineensis
RepID=A1XK07_LEEGU
Length = 829
Score = 219 bits (558), Expect = 1e-55
Identities = 125/221 (56%), Positives = 150/221 (67%), Gaps = 29/221 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQV---------------------------RL 482
S+ KDQDQMS SL +R TS V+N+QV
Sbjct: 19 SIHKDQDQMSVRSLSVDRRYTS---VTNDQVIHGFFSSDLSGKKEGRIPAYSELNRIIYT 75
Query: 481 CPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGII 308
C+ + P I + S+LLAK+RRNRFIIPF +SI+ER ELMP IS+EIPI+GI
Sbjct: 76 YTGRCNLIDPAILHENSDLLAKRRRNRFIIPF--QSIQEREKELMPPSGISIEIPINGIF 133
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+NSILAYFDD +YR SSGI KY TI +HSI +KEDLIEYRG++EFKPKYQ+KVDRFFF
Sbjct: 134 RRNSILAYFDDARYRRNSSGITKYGTIEVHSIVKKEDLIEYRGVKEFKPKYQMKVDRFFF 193
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVR 5
IP+EVHIL S+SIMVR NSIIGV+T I LN +SR+GGLVR
Sbjct: 194 IPEEVHILPGSASIMVRTNSIIGVDTRIALNTRSRIGGLVR 234
[171][TOP]
>UniRef100_A1XK70 RNA polymerase beta chain (Fragment) n=1 Tax=Croomia pauciflora
RepID=A1XK70_9LILI
Length = 849
Score = 219 bits (557), Expect = 2e-55
Identities = 118/218 (54%), Positives = 151/218 (69%), Gaps = 25/218 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-----------------------LCPDH 470
SL KDQDQM+ HS +R S+F ++NN+VR + H
Sbjct: 31 SLHKDQDQMNVHSFSVEERYISDFSMTNNRVRQKLLDTSGKKDREILEYSRSDRIISNGH 90
Query: 469 CHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKNS 296
+F++P+ + S+ LAK RRNRFIIP + +ER EL+P IS+EIPI+GI+ +NS
Sbjct: 91 WNFIYPSTLQENSDFLAKGRRNRFIIPLQYD--QEREKELIPCFGISIEIPINGILRRNS 148
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQE 116
ILAYFDDP+YR SSGI KY +G+ SI +KEDL+EY+G +EF+PKYQI+VDRFFFIP+E
Sbjct: 149 ILAYFDDPRYRRSSSGITKYGIVGVDSIIKKEDLLEYQGTKEFRPKYQIQVDRFFFIPEE 208
Query: 115 VHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
VHIL SS IMVRNNSIIGV+T + LN +SRVGGLVRV
Sbjct: 209 VHILPGSSPIMVRNNSIIGVDTRLALNTRSRVGGLVRV 246
[172][TOP]
>UniRef100_A9XW68 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cupaniopsis
anacardioides RepID=A9XW68_CUPAN
Length = 1266
Score = 218 bits (556), Expect = 2e-55
Identities = 121/222 (54%), Positives = 151/222 (68%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQ+S H +R SN V+N+QVR +
Sbjct: 459 SLYKDQDQLSIHYHSVERRYISNLSVNNDQVRHQLVSSDFSDKKEDGISDYSGFNRIIGI 518
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
HC+ +H I + S+LLAK+RRNRF+IPF +SI+E+ ELMP IS+EIP G+ K
Sbjct: 519 GHCNLIHAAILHENSDLLAKRRRNRFLIPF--QSIQEQEKELMPHLGISIEIPTKGVFRK 576
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGI--REFKPKYQIKVDRFFF 128
NSI AYFDDP+YR ++SGI KY TIG HSI +KEDLIEYRG ++ KPKYQ+K DRFFF
Sbjct: 577 NSIFAYFDDPRYRRKNSGITKYGTIGAHSIVKKEDLIEYRGRGGKKIKPKYQMKFDRFFF 636
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVH L ESS +MVRNNS+IGV+T ITLN++S+VGGLVRV
Sbjct: 637 IPEEVHTLPESSYVMVRNNSLIGVDTRITLNRRSQVGGLVRV 678
[173][TOP]
>UniRef100_A1XKE0 RNA polymerase beta chain (Fragment) n=1 Tax=Petrophile canescens
RepID=A1XKE0_9MAGN
Length = 789
Score = 218 bits (556), Expect = 2e-55
Identities = 127/221 (57%), Positives = 150/221 (67%), Gaps = 29/221 (13%)
Frame = -2
Query: 577 LLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCPD 473
L KDQDQ++ HSL +R SN V+N QVR L
Sbjct: 1 LHKDQDQINVHSLSVERRYISNLSVTNEQVRHKLFSPYPSSKRGEGILDYSGPDRILFNS 60
Query: 472 HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELM--PDISVEIPIDGIIHKN 299
C+F++P I + S+LLAKKRRNRFIIP F+S +ER NELM IS+EIPI+GI +N
Sbjct: 61 RCNFVYPAILHENSDLLAKKRRNRFIIP--FQSSQERENELMSGSGISIEIPINGIFRRN 118
Query: 298 SILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKP--KYQIKVDRFFFI 125
SILAYFDDP+YR SSGI K TI +HSI +KEDLIEYR +EF+P K Q KVDRFFFI
Sbjct: 119 SILAYFDDPRYRRNSSGITKSGTIEVHSIIKKEDLIEYRRAKEFRPKCKMQTKVDRFFFI 178
Query: 124 PQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
P+EV+IL SSSIMVRNNSIIGV+T ITLN +SRV GLVRV
Sbjct: 179 PEEVYILPGSSSIMVRNNSIIGVDTRITLNTRSRVAGLVRV 219
[174][TOP]
>UniRef100_A1XK87 RNA polymerase beta chain (Fragment) n=1 Tax=Aristolochia
macrophylla RepID=A1XK87_ARIMA
Length = 832
Score = 218 bits (556), Expect = 2e-55
Identities = 118/215 (54%), Positives = 144/215 (66%), Gaps = 25/215 (11%)
Frame = -2
Query: 571 KDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCPDHC 467
+DQDQM+ HSLP +R S V+N++VR + H
Sbjct: 21 RDQDQMNVHSLPVEQRYISGLSVTNDRVRHKLFSSDPFGKKVDRGFYYSRPDRIISNGHW 80
Query: 466 HFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISVEIPIDGIIHKNSILA 287
+F++P I + S+LL K+RRNRFI+PF + RE+ IS+EI I GI+ KNSILA
Sbjct: 81 NFIYPAILYENSDLLGKRRRNRFILPFQYDQEREKELMSCSGISIEILITGILRKNSILA 140
Query: 286 YFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEVHI 107
YFDDPQYR +SGI KY TI + I +KEDLIEYRG +EF+PKYQ+KVDRFFFIP+EVHI
Sbjct: 141 YFDDPQYRRSNSGITKYGTIEVDFILKKEDLIEYRGAKEFRPKYQMKVDRFFFIPEEVHI 200
Query: 106 LSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
L SSSIMVRNNSIIGV T I LN +SRVGGLVRV
Sbjct: 201 LPGSSSIMVRNNSIIGVGTRIALNTRSRVGGLVRV 235
[175][TOP]
>UniRef100_A9XW55 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cannabis sativa
RepID=A9XW55_CANSA
Length = 1275
Score = 218 bits (554), Expect = 4e-55
Identities = 127/225 (56%), Positives = 153/225 (68%), Gaps = 32/225 (14%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNF---LVSNNQVR------------------------- 485
S+ KDQDQ + + L +N S+ V+N+Q +
Sbjct: 463 SIHKDQDQTNVYFLSAEGKNISSRSVNTVNNDQGKGKFFSSDFSGKKESTIPDYSEFNRI 522
Query: 484 LCPDHCHFMHPTISPDTSNL--LAKKRRNRFIIPFLFRSIRERNNELM--PDISVEIPID 317
+ DH + + P+I +L LAK+RRNRFIIPF + I+ER NELM IS+EIPI+
Sbjct: 523 IDRDHWNLIFPSILHKNYDLFLLAKRRRNRFIIPFQW--IQERENELMLRSSISIEIPIN 580
Query: 316 GIIHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDR 137
G+ KNSILAYFDDPQYR +SSGI KY IG+HSIF+KEDLIEY GI+E KPKYQ KVDR
Sbjct: 581 GVFRKNSILAYFDDPQYRRKSSGITKYGAIGLHSIFKKEDLIEYVGIKELKPKYQTKVDR 640
Query: 136 FFFIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
FFFIP+EVHIL ESSSIMVRNNSIIG+NT ITLN +SRVGGLVRV
Sbjct: 641 FFFIPEEVHILPESSSIMVRNNSIIGINTQITLNTRSRVGGLVRV 685
[176][TOP]
>UniRef100_A1XK40 RNA polymerase beta chain (Fragment) n=1 Tax=Eupomatia bennettii
RepID=A1XK40_9MAGN
Length = 859
Score = 218 bits (554), Expect = 4e-55
Identities = 122/220 (55%), Positives = 150/220 (68%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
S KDQDQM+ HSL +R S+ V+N++VR +
Sbjct: 43 SFHKDQDQMNVHSLSVERRYISDLSVTNDRVRHKLFSSDPFVKKRGGIFDYSGPDRIISN 102
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
H +F++P I + S+LLAK+RRNRFIIPF + +ER ELMP IS+EIPI+GI+ +
Sbjct: 103 GHWNFLYPHILHENSDLLAKRRRNRFIIPFQYD--QEREKELMPHSGISIEIPINGILRR 160
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDD +YR SSGI KY TI + SI +KEDLIEYRG +EF KYQ+KVDRFFFIP
Sbjct: 161 NSILAYFDDLRYRRSSSGITKYGTIEVDSIVKKEDLIEYRGAKEFSSKYQMKVDRFFFIP 220
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SS IMVRNNSI+GV+T I LN +SRVGGLVRV
Sbjct: 221 EEVHILPGSSPIMVRNNSIVGVDTRIALNTRSRVGGLVRV 260
[177][TOP]
>UniRef100_B0Z5C9 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Oenothera
parviflora RepID=RPOC2_OENPA
Length = 1383
Score = 218 bits (554), Expect = 4e-55
Identities = 116/221 (52%), Positives = 153/221 (69%), Gaps = 28/221 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------------------LC 479
SL KDQDQM+ S +R S+ +N+Q+R +C
Sbjct: 490 SLHKDQDQMNPRSTERERRYLSSLSANNDQIRYKFFSSSFSGKKKDDRSPGYSEMNRIIC 549
Query: 478 PDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIH 305
C+ ++P+I + S+LLAK+RRNR +IP +S +ER EL+P IS+E+PI+GI
Sbjct: 550 TLPCNLIYPSILRENSDLLAKRRRNRLVIPV--QSSQEREKELIPHSGISIELPINGIFR 607
Query: 304 KNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFI 125
K SILA+FDDP+YRT+SSGI +Y+T+G+HSI +KE L++YRGI EFKPKYQ+ +DRFFFI
Sbjct: 608 KKSILAFFDDPRYRTKSSGITQYETMGMHSIVKKEGLVDYRGINEFKPKYQMTIDRFFFI 667
Query: 124 PQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
P+EVHIL ESSSIMVRNNS+IGV+T I LN +SR GGLVRV
Sbjct: 668 PEEVHILPESSSIMVRNNSLIGVDTRIALNTRSRAGGLVRV 708
[178][TOP]
>UniRef100_B0Z4M7 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Oenothera
argillicola RepID=RPOC2_OENAR
Length = 1383
Score = 218 bits (554), Expect = 4e-55
Identities = 116/221 (52%), Positives = 153/221 (69%), Gaps = 28/221 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------------------LC 479
SL KDQDQM+ S +R S+ +N+Q+R +C
Sbjct: 490 SLHKDQDQMNPRSTERERRYLSSLSANNDQIRYKFFSSSFSGKKKDDRSPGYSEMNRIIC 549
Query: 478 PDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIH 305
C+ ++P+I + S+LLAK+RRNR +IP +S +ER EL+P IS+E+PI+GI
Sbjct: 550 TLPCNLIYPSILRENSDLLAKRRRNRLVIPV--QSSQEREKELIPHSGISIELPINGIFR 607
Query: 304 KNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFI 125
K SILA+FDDP+YRT+SSGI +Y+T+G+HSI +KE L++YRGI EFKPKYQ+ +DRFFFI
Sbjct: 608 KKSILAFFDDPRYRTKSSGITQYETMGMHSIVKKEGLVDYRGINEFKPKYQMTIDRFFFI 667
Query: 124 PQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
P+EVHIL ESSSIMVRNNS+IGV+T I LN +SR GGLVRV
Sbjct: 668 PEEVHILPESSSIMVRNNSLIGVDTRIALNTRSRAGGLVRV 708
[179][TOP]
>UniRef100_A9XWC3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Terminalia catappa
RepID=A9XWC3_TERCT
Length = 1274
Score = 217 bits (552), Expect = 6e-55
Identities = 119/221 (53%), Positives = 153/221 (69%), Gaps = 28/221 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------------------LC 479
SL KDQDQM+ S +R+ S+ V+N+Q+R +C
Sbjct: 459 SLHKDQDQMNLRSSYVERRSLSSLSVNNDQIRYKLFSSNFSGKKKEDRIPDYSELNRIIC 518
Query: 478 PDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIH 305
+ ++P I + S+LLAK+RRNRF+IPF +SI+E L+P+ IS+E+PI+GI
Sbjct: 519 IGQWNLIYPAILHENSDLLAKRRRNRFLIPF--QSIQEGEKALIPNSGISMELPINGIFR 576
Query: 304 KNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFI 125
+NSILAYFDDP+YR +SGI KY TIG+H I + E LIEYRGI+EF KY +K+DRFFFI
Sbjct: 577 RNSILAYFDDPRYRRNTSGITKYGTIGVHLIVKTEALIEYRGIKEFNAKYPMKIDRFFFI 636
Query: 124 PQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
P+EVHILSESSSIMVRNNS+IGV+T ITLN +SRVGGLVRV
Sbjct: 637 PEEVHILSESSSIMVRNNSLIGVDTRITLNTRSRVGGLVRV 677
[180][TOP]
>UniRef100_A1XK49 RNA polymerase beta chain (Fragment) n=1 Tax=Impatiens pallida
RepID=A1XK49_9ERIC
Length = 815
Score = 217 bits (552), Expect = 6e-55
Identities = 119/218 (54%), Positives = 153/218 (70%), Gaps = 29/218 (13%)
Frame = -2
Query: 568 DQDQMSTHSLPTAKRNTSNFLVSNNQVRL----------------CPDHC---------- 467
DQDQ +THSL +R SN LV+N+QVRL PD+
Sbjct: 1 DQDQTNTHSLSVKQRYISNLLVTNDQVRLKLFSSDLSSKGKKEDRIPDYSELHRIISTGY 60
Query: 466 -HFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHKNS 296
+ ++P+I D S+ LAK+RRNR IIP +SI+E+ ELMP I++EIPI+GI +NS
Sbjct: 61 YNLIYPSILHDNSDFLAKRRRNRLIIPL--QSIQEQEKELMPPLGIAIEIPINGIPRRNS 118
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQE 116
I+AY DDP+YR +SSGI KY TI +HSI +KE LIEYRG++E +PKY++K+DRFFFIP+E
Sbjct: 119 IIAYIDDPRYRRKSSGITKYGTIEVHSIVKKEGLIEYRGVKEVRPKYEMKIDRFFFIPEE 178
Query: 115 VHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
VH+L S SIMV+NNSIIGV+T ITLN K+RVGGLVRV
Sbjct: 179 VHLLPGSCSIMVQNNSIIGVDTQITLNTKNRVGGLVRV 216
[181][TOP]
>UniRef100_A1XK15 RNA polymerase beta chain (Fragment) n=1 Tax=Grevillea robusta
RepID=A1XK15_9MAGN
Length = 854
Score = 217 bits (552), Expect = 6e-55
Identities = 127/222 (57%), Positives = 149/222 (67%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQ++ HSL +R S V+N QVR LC
Sbjct: 45 SLHKDQDQINVHSLSVERRYISKLSVTNEQVRHNLFSSYPSSKRGERILNYSGPDRILCN 104
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
C+F +P I + S+LLAK+RRNRFIIPF +S +ER NE M IS+EIPI+GI +
Sbjct: 105 SRCNFAYPAILHENSDLLAKRRRNRFIIPF--QSNQERENEPMSGSGISIEIPINGIFRR 162
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREF--KPKYQIKVDRFFF 128
NSILAYFDDP+YR SSGI K TI +HSI +KEDLIEYR +EF K K Q KVDRFFF
Sbjct: 163 NSILAYFDDPRYRRNSSGITKSGTIEVHSIVKKEDLIEYRRAKEFRSKCKMQTKVDRFFF 222
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHIL SSSIMV+NNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 223 IPEEVHILPGSSSIMVQNNSIIGVDTRITLNTRSRVGGLVRV 264
[182][TOP]
>UniRef100_A9XW70 DNA-directed RNA polymerase (Fragment) n=1 Tax=Elaeagnus sp. Nickrent
2898 RepID=A9XW70_9ROSA
Length = 1260
Score = 216 bits (551), Expect = 8e-55
Identities = 108/159 (67%), Positives = 132/159 (83%), Gaps = 2/159 (1%)
Frame = -2
Query: 472 HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKN 299
H + + P+I S+LLAK+RRNRFIIPF + R E+MP +IS+EIPI+GI +N
Sbjct: 525 HSNLLFPSILHKNSDLLAKRRRNRFIIPFQWIQERGTEMEIMPCSNISIEIPINGIFRRN 584
Query: 298 SILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQ 119
SILAYFDDPQYR +SSGIAKY TIG+HSI +K DLIEYRG++EF PK+Q+K+DRFFFIP+
Sbjct: 585 SILAYFDDPQYRRESSGIAKYGTIGLHSILKKVDLIEYRGVKEFTPKHQMKIDRFFFIPE 644
Query: 118 EVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
EVHIL ES+S+MVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 645 EVHILPESASVMVRNNSIIGVDTQITLNTRSRVGGLVRV 683
[183][TOP]
>UniRef100_A1XKC7 RNA polymerase beta chain (Fragment) n=1 Tax=Xanthorrhoea
quadrangulata RepID=A1XKC7_XANQU
Length = 811
Score = 216 bits (551), Expect = 8e-55
Identities = 115/214 (53%), Positives = 151/214 (70%), Gaps = 25/214 (11%)
Frame = -2
Query: 568 DQDQMSTHSLPTAKRNTSNFLVSNNQVR-----------------------LCPDHCHFM 458
DQDQM+ S A+R S+ ++N++VR + H +F+
Sbjct: 1 DQDQMNVRSFSVAERYISDLSITNDRVRHKLLDPSGKKDREILDYSRLDRIISNGHWNFI 60
Query: 457 HPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHKNSILAY 284
+P+I + S+ LAK+RRNRF+IP + +ER EL+P IS+EIPI+GI+ +NSILAY
Sbjct: 61 YPSILQENSDFLAKRRRNRFLIPLQYD--QEREKELIPPFGISIEIPINGILRRNSILAY 118
Query: 283 FDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEVHIL 104
FDDP+YR +SSGI KY T+G+ SI +KEDLIEY+G +EF PKYQ+KVDRFFFIP+EVHIL
Sbjct: 119 FDDPRYRRKSSGITKYGTVGVDSIVKKEDLIEYQGAKEFSPKYQMKVDRFFFIPEEVHIL 178
Query: 103 SESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
SSSIMV+NNSIIGV+T + LN +SRVGGLVRV
Sbjct: 179 PGSSSIMVQNNSIIGVDTQLALNTRSRVGGLVRV 212
[184][TOP]
>UniRef100_A1XKC1 RNA polymerase beta chain (Fragment) n=1 Tax=Schisandra
sphenanthera RepID=A1XKC1_SCHSP
Length = 816
Score = 216 bits (551), Expect = 8e-55
Identities = 120/217 (55%), Positives = 147/217 (67%), Gaps = 27/217 (12%)
Frame = -2
Query: 571 KDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCPDHC 467
KDQDQM+ SL +R+ SN V+N+QVR L H
Sbjct: 1 KDQDQMNLQSLSVEQRSISNLSVNNDQVRHKLFDSDPSGKKGERFFGYSGPDRILSKGHW 60
Query: 466 HFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKNSI 293
F +P I D SN LAK+RRNRFII F + +ER EL P I+++IPI+GI+ +NSI
Sbjct: 61 DFRYPAILHDNSNFLAKRRRNRFIIAF--QHAQEREKELSPRSGIAIQIPINGILRRNSI 118
Query: 292 LAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEV 113
LAYFDDP+YR SSGI KY TI + SI +K+DLIEYRG +E +PKYQ+KV+RFFFIP+EV
Sbjct: 119 LAYFDDPRYRRSSSGITKYGTIEVDSIVKKDDLIEYRGAKELRPKYQMKVNRFFFIPEEV 178
Query: 112 HILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
HIL SS IMVRNNSIIGV+T ITLN +SR+GGLVRV
Sbjct: 179 HILPGSSPIMVRNNSIIGVDTRITLNTRSRIGGLVRV 215
[185][TOP]
>UniRef100_A1XK19 RNA polymerase beta chain (Fragment) n=1 Tax=Xanthorhiza
simplicissima RepID=A1XK19_XANSI
Length = 861
Score = 216 bits (551), Expect = 8e-55
Identities = 120/220 (54%), Positives = 150/220 (68%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQ++ +SL ++ SN V+N+QVR +C
Sbjct: 45 SLHKDQDQINIYSLSAERKYISNLSVTNDQVRHKLFRSDPSGKKKGGALDYSGPDRSICN 104
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
DHC+F++P I D S L AK+RRNRFIIP +S +E+ E +P IS+EIPI+G+
Sbjct: 105 DHCNFIYPAILDDNSYLFAKRRRNRFIIPL--QSNQEQEKEAIPRSGISIEIPINGLFRI 162
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR +SSGI KY TI +HSI +KEDLIEYR +EF+ K Q+K+D FFIP
Sbjct: 163 NSILAYFDDPRYRRKSSGITKYGTIEVHSIVKKEDLIEYRRTKEFRLKSQMKIDLLFFIP 222
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSSIMVRNNSIIGV+T IT N +SRVGGLVRV
Sbjct: 223 EEVHILPGSSSIMVRNNSIIGVDTRITFNTRSRVGGLVRV 262
[186][TOP]
>UniRef100_Q09MI8 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Citrus sinensis
RepID=RPOC2_CITSI
Length = 1403
Score = 216 bits (551), Expect = 8e-55
Identities = 118/225 (52%), Positives = 150/225 (66%), Gaps = 32/225 (14%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR---------------------------- 485
SL KDQDQM+ HSL +R S+ +S N +
Sbjct: 492 SLHKDQDQMNIHSLSVERREISSLSLSVNNDQTGHKFFSSDFSAKKKGRILEMSDYSGFN 551
Query: 484 --LCPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPID 317
+ HC+ +HP I S+LLAK++RN F+IPF SI+E+ ELMP IS+EIP+
Sbjct: 552 RIISTGHCNLIHPAILHANSDLLAKRQRNGFLIPF--HSIQEQEKELMPHSGISIEIPVR 609
Query: 316 GIIHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDR 137
GI +NSILAYFDDP+YR +SSGI K+ T+G HSI +KEDLIEYRG+++ KPKYQ+K+DR
Sbjct: 610 GIFRRNSILAYFDDPRYRRKSSGITKWGTLGAHSIVKKEDLIEYRGLKKIKPKYQMKIDR 669
Query: 136 FFFIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
FFIP+EVHI ESS +MVRNNSIIGV+T ITLN +SRVGGLVR+
Sbjct: 670 LFFIPEEVHIFPESSYLMVRNNSIIGVDTQITLNIRSRVGGLVRM 714
[187][TOP]
>UniRef100_A6YAM0 RNA polymerase beta' subunit (Fragment) n=1 Tax=Saxifraga
stolonifera RepID=A6YAM0_9MAGN
Length = 830
Score = 216 bits (550), Expect = 1e-54
Identities = 120/219 (54%), Positives = 150/219 (68%), Gaps = 29/219 (13%)
Frame = -2
Query: 571 KDQDQMSTHSLPTAKRNTSNFLVSNNQVR----------------------LCPDHCHFM 458
+DQDQM HSL ++ SN ++N+ VR +C DH + +
Sbjct: 33 EDQDQMGVHSLSLERKYISNLSMTNDHVRHKLFSSHRSGKRIPYSSELNRIICTDHSNLI 92
Query: 457 HPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD----ISVEIPIDGIIHKNSIL 290
+ I + +LL+K+R+NR IIPF +SI+ER E +P IS+EIPI+GI HKNSIL
Sbjct: 93 YLAILHENYDLLSKRRKNRLIIPF--QSIQEREREQIPHSDSGISIEIPINGIFHKNSIL 150
Query: 289 AYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRG---IREFKPKYQIKVDRFFFIPQ 119
AYFDDP+YR SSGI KY TI +HSI +K DLIEYRG +EFK +YQ+KVDRFFFIP+
Sbjct: 151 AYFDDPRYRRNSSGITKYGTIEVHSIVKKGDLIEYRGGQEFKEFKSRYQMKVDRFFFIPE 210
Query: 118 EVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
EVHIL SSSIMVRNNSIIGV+T ITL K+SRVGGLVR+
Sbjct: 211 EVHILPGSSSIMVRNNSIIGVSTRITLTKRSRVGGLVRM 249
[188][TOP]
>UniRef100_A1XK99 RNA polymerase beta chain (Fragment) n=1 Tax=Sterculia balanghas
RepID=A1XK99_9ROSI
Length = 869
Score = 216 bits (550), Expect = 1e-54
Identities = 122/222 (54%), Positives = 154/222 (69%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQ++ + L +R S F V+N+QVR +
Sbjct: 45 SLHKDQDQINIYYLSAERRYISRFSVNNDQVRHKLFSSDFLDKKEDRISYYSEFHRIIGT 104
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELM----PDISVEIPIDGII 308
HC F++ I + ++LLAK+RRNRFIIPF + I+++ ELM IS+EIPI+GI
Sbjct: 105 GHCDFIYSAILHENADLLAKRRRNRFIIPF--QLIQDQEKELMLHSHSGISMEIPINGIF 162
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+ SILA+FDDP+YR +SSGI KY TIG HSI +KED EYRG+++ KPKYQ+KVDRFFF
Sbjct: 163 RRKSILAFFDDPRYRRKSSGITKYGTIGAHSIVKKED--EYRGVKKVKPKYQMKVDRFFF 220
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHILSESSSIMVRNNSIIGV+T ITLN +S+VGGLVRV
Sbjct: 221 IPEEVHILSESSSIMVRNNSIIGVDTQITLNTRSQVGGLVRV 262
[189][TOP]
>UniRef100_C3KEF7 DNA-directed RNA polymerase n=1 Tax=Ceratophyllum demersum
RepID=C3KEF7_CERDE
Length = 1390
Score = 215 bits (548), Expect = 2e-54
Identities = 120/217 (55%), Positives = 150/217 (69%), Gaps = 24/217 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------------LCPD---- 473
S+ KDQDQ++ +SL +R S+ V+N++VR PD
Sbjct: 493 SIQKDQDQINVNSLFVEQRYISDLSVTNDRVRHKIFSSDPSGQKGGRIFDYDSGPDRIVS 552
Query: 472 HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISVEIPIDGIIHKNSI 293
+ F++P I + S+LLAK+RRNRF+IPF + +E+ IS EIPI+GI+ +NSI
Sbjct: 553 NSQFLYPAIPHENSDLLAKRRRNRFLIPFQYDQEQEKELMCPYGISTEIPINGILRRNSI 612
Query: 292 LAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEV 113
LAYFDDP+YR SSGI KY TI + SI +KEDLIEYRG +EF+PKYQ KVDRFFFIP+EV
Sbjct: 613 LAYFDDPRYRRSSSGITKYATIEVDSIVKKEDLIEYRGSKEFRPKYQTKVDRFFFIPEEV 672
Query: 112 HILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
HIL SSSIMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 673 HILPGSSSIMVRNNSIIGVDTRITLNIRSRVGGLVRV 709
[190][TOP]
>UniRef100_A9XW45 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anisoptera marginata
RepID=A9XW45_9ROSI
Length = 1259
Score = 215 bits (548), Expect = 2e-54
Identities = 117/217 (53%), Positives = 152/217 (70%), Gaps = 24/217 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR---LCPD-------------------HC 467
SL KDQDQ++ HSL +R+ S+ V+N+ VR PD
Sbjct: 461 SLHKDQDQINVHSLSAEQRSNSSLSVNNDNVRHKFFSPDFSDKKEGRISDYSELMGNEQS 520
Query: 466 HFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHKNSI 293
+F++ I + S+LL K+RRNRFIIPF SI+++ LMP IS+EIPI+GI +NSI
Sbjct: 521 NFIYSAILHENSDLLGKRRRNRFIIPF--HSIQDQEKALMPHSGISIEIPINGIFRRNSI 578
Query: 292 LAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEV 113
L++FDD +Y+ SSGI KY TIG+HSI + ED+IEYRG+++ PKYQ KVDRFFFIP+EV
Sbjct: 579 LSFFDDFRYKRNSSGITKYGTIGVHSIVKNEDVIEYRGVKKLNPKYQTKVDRFFFIPEEV 638
Query: 112 HILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
HIL ESSSIMVRNNSI+GV+T +TLN +S+VGGLVRV
Sbjct: 639 HILPESSSIMVRNNSIVGVDTQLTLNTRSQVGGLVRV 675
[191][TOP]
>UniRef100_A1XK88 RNA polymerase beta chain (Fragment) n=1 Tax=Asarum canadense
RepID=A1XK88_ASACA
Length = 822
Score = 215 bits (548), Expect = 2e-54
Identities = 122/220 (55%), Positives = 148/220 (67%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KD DQM+ +SL +R S+ V+N++VR +
Sbjct: 5 SLHKDPDQMNVNSLSVEQRYISDLSVTNDRVRHKLFSSYPSGKKGDRSFYYSRPDRIIST 64
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
H +F++ I + S+LLAK+RRN F+IPF + +E+ ELMP IS+EIPI GI K
Sbjct: 65 GHWNFIYSAILHENSDLLAKRRRNGFLIPFQYD--QEQEKELMPRSGISIEIPITGIFRK 122
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR SSGI KY TI + SI +KEDLIEYRG +E PKYQ+KVDRFFFIP
Sbjct: 123 NSILAYFDDPRYRRSSSGITKYGTIEVDSIVKKEDLIEYRGAKELSPKYQMKVDRFFFIP 182
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSSIMVRNNSIIGVNT I LN +SRVGGLVRV
Sbjct: 183 EEVHILPGSSSIMVRNNSIIGVNTQIALNTRSRVGGLVRV 222
[192][TOP]
>UniRef100_A8SE78 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Ceratophyllum
demersum RepID=RPOC2_CERDE
Length = 1390
Score = 215 bits (548), Expect = 2e-54
Identities = 120/217 (55%), Positives = 150/217 (69%), Gaps = 24/217 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------------LCPD---- 473
S+ KDQDQ++ +SL +R S+ V+N++VR PD
Sbjct: 493 SIQKDQDQINVNSLFVEQRYISDLSVTNDRVRHKIFSSDPSGQKGGRIFDYDSGPDRIVS 552
Query: 472 HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISVEIPIDGIIHKNSI 293
+ F++P I + S+LLAK+RRNRF+IPF + +E+ IS EIPI+GI+ +NSI
Sbjct: 553 NSQFLYPAIPHENSDLLAKRRRNRFLIPFQYDQEQEKELMCPYGISTEIPINGILRRNSI 612
Query: 292 LAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEV 113
LAYFDDP+YR SSGI KY TI + SI +KEDLIEYRG +EF+PKYQ KVDRFFFIP+EV
Sbjct: 613 LAYFDDPRYRRSSSGITKYATIEVDSIVKKEDLIEYRGSKEFRPKYQTKVDRFFFIPEEV 672
Query: 112 HILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
HIL SSSIMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 673 HILPGSSSIMVRNNSIIGVDTRITLNIRSRVGGLVRV 709
[193][TOP]
>UniRef100_A1XK94 RNA polymerase beta chain (Fragment) n=1 Tax=Hortonia floribunda
RepID=A1XK94_9MAGN
Length = 790
Score = 215 bits (547), Expect = 2e-54
Identities = 121/220 (55%), Positives = 152/220 (69%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HS+ +R S+ ++N+++R +
Sbjct: 14 SLHKDQDQMNVHSVE--RRYISDLSMANDRMRYKLFSSDPYGKKGGRVLDYSGPARIISN 71
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
H +F++P I + S+LLAK+RRNRF+IPF +ER ELMP IS+EIPI+GI+ +
Sbjct: 72 GHWNFIYPAILRENSDLLAKRRRNRFLIPFQLD--QEREKELMPRSGISIEIPINGILRR 129
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR SSGI KY TIG+ SI +KEDLIEYR +EF+PKYQ+KVDRFFFIP
Sbjct: 130 NSILAYFDDPRYRKNSSGITKYGTIGVGSIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIP 189
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL S IMVRNNSIIGV+T I LN +SRVGGLVRV
Sbjct: 190 EEVHILPGSLPIMVRNNSIIGVDTRIALNTRSRVGGLVRV 229
[194][TOP]
>UniRef100_A6MMT4 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Illicium
oligandrum RepID=RPOC2_ILLOL
Length = 1385
Score = 215 bits (547), Expect = 2e-54
Identities = 119/217 (54%), Positives = 144/217 (66%), Gaps = 24/217 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR------------------------LCPD 473
SL KDQDQM+ SL +R SN V+N++VR L
Sbjct: 495 SLHKDQDQMNLQSLSVEQRYISNLSVNNDRVRHKLFDLDPFWKKKGGVGYSGPDRILSNG 554
Query: 472 HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISVEIPIDGIIHKNSI 293
H F++P I + SNLLAK+RRNRFII F RE+ I +EIPI+GI+ +NSI
Sbjct: 555 HWDFIYPAILHENSNLLAKRRRNRFIISFQHDQEREKKLPPRSGIKIEIPINGILRRNSI 614
Query: 292 LAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEV 113
LAYFDDP+YR SSGI KY TI + SI +K+DLIEYRG +E +PKYQ+KVD FFFIP+EV
Sbjct: 615 LAYFDDPRYRRSSSGITKYGTIEVDSIVKKDDLIEYRGAKELRPKYQMKVDPFFFIPEEV 674
Query: 112 HILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
HIL SS IMVRNNSIIGV+T ITLN +SR+GGLVRV
Sbjct: 675 HILPGSSPIMVRNNSIIGVDTRITLNTRSRIGGLVRV 711
[195][TOP]
>UniRef100_B9NJ68 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NJ68_POPTR
Length = 279
Score = 214 bits (546), Expect = 3e-54
Identities = 105/154 (68%), Positives = 131/154 (85%)
Frame = -2
Query: 463 FMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISVEIPIDGIIHKNSILAY 284
F++PTI + S+LLAK+R+NRFIIPF +SI+E+ DI +EIPI+GI +NSI AY
Sbjct: 6 FIYPTILHENSDLLAKRRKNRFIIPF--QSIQEKELMSHSDILIEIPINGIFRRNSIFAY 63
Query: 283 FDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEVHIL 104
FDDPQYR +SSGI KY IG+HSI +KEDL+EYRG++EF+PKYQ+KVDRFFFIP+EV+IL
Sbjct: 64 FDDPQYRRKSSGITKYVAIGVHSIVKKEDLVEYRGVKEFQPKYQMKVDRFFFIPEEVYIL 123
Query: 103 SESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
ESSS+MVRNNSIIGV+T ITLN KSRVGGL+R+
Sbjct: 124 PESSSLMVRNNSIIGVDTQITLNTKSRVGGLIRI 157
[196][TOP]
>UniRef100_A1XKE6 RNA polymerase beta chain (Fragment) n=1 Tax=Degeneria vitiensis
RepID=A1XKE6_9MAGN
Length = 765
Score = 214 bits (545), Expect = 4e-54
Identities = 117/209 (55%), Positives = 146/209 (69%), Gaps = 27/209 (12%)
Frame = -2
Query: 547 HSLPTAKRNTSNFLVSNNQVR-------------------------LCPDHCHFMHPTIS 443
HSL +R+ S+ V+N++VR + H +F++P I
Sbjct: 3 HSLSVERRSISDLSVTNDRVRHKLFSSDPSGKKRGGILDYSGLDRIISNGHWNFLYPAIL 62
Query: 442 PDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKNSILAYFDDPQ 269
+ S+LLAK+RRNRFIIPF + +ER ELMP IS+EIPI+GI+ +NSILAYFDDP+
Sbjct: 63 HENSDLLAKRRRNRFIIPFQYD--QEREKELMPRFGISIEIPINGILRRNSILAYFDDPR 120
Query: 268 YRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEVHILSESSS 89
YR SSGI KY TI + SI +KEDLIEYRG +EF+PKYQ+KVDRFFFIP+EVHIL SS
Sbjct: 121 YRRSSSGITKYGTIEVDSIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSP 180
Query: 88 IMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IMVRNNSIIG++T I LN +SRVGGLVRV
Sbjct: 181 IMVRNNSIIGIDTRIALNTRSRVGGLVRV 209
[197][TOP]
>UniRef100_A1XKA6 RNA polymerase beta chain (Fragment) n=1 Tax=Oenothera organensis
RepID=A1XKA6_OENOR
Length = 796
Score = 214 bits (545), Expect = 4e-54
Identities = 104/163 (63%), Positives = 136/163 (83%), Gaps = 2/163 (1%)
Frame = -2
Query: 484 LCPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGI 311
+C HC+ ++P+I + S+LLAK+RRNR +IP +S +ER EL+P IS+E+PI+GI
Sbjct: 33 ICTLHCNLIYPSILRENSDLLAKRRRNRLVIPV--QSSQEREKELIPHSGISIELPINGI 90
Query: 310 IHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFF 131
K SILA+FDDP+YRT+SSGI +Y+T+G+HSI +KEDL++YRGI+EFKPKYQ+ +DRFF
Sbjct: 91 FRKKSILAFFDDPRYRTKSSGITQYETMGMHSIVKKEDLVDYRGIKEFKPKYQMTIDRFF 150
Query: 130 FIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
FIP+EVHIL ESSSIMVRNNS+IGV+T I LN +SR GGLVRV
Sbjct: 151 FIPEEVHILPESSSIMVRNNSLIGVDTRIALNTRSRAGGLVRV 193
[198][TOP]
>UniRef100_A1XK25 RNA polymerase beta chain (Fragment) n=1 Tax=Xanthosoma mafaffa
RepID=A1XK25_XANMF
Length = 843
Score = 214 bits (545), Expect = 4e-54
Identities = 116/220 (52%), Positives = 148/220 (67%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM HS ++ S+ V+N+ R +
Sbjct: 28 SLHKDQDQMDVHSFSLEEKYISDLSVTNDPTRHKLFSSDFSSKKKGGALDYSRPDRSISN 87
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
H +F +P+I + S+ LAK+RRNR IIP + +ER EL+P +S+EIPI+GI+ +
Sbjct: 88 GHWNFKYPSILHENSDFLAKRRRNRLIIPLQYD--QEREKELIPRFGVSIEIPINGILRR 145
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
SILAYFDDP+YR SSGI KY T+ + SI +KEDLIEYRG +EF+PKYQ+KVDRFFFIP
Sbjct: 146 KSILAYFDDPRYRRNSSGITKYGTVEVDSIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIP 205
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVH+L SS IMVRNNSIIGV+TP+TLN +SRVGGLVRV
Sbjct: 206 EEVHVLPGSSLIMVRNNSIIGVDTPLTLNTRSRVGGLVRV 245
[199][TOP]
>UniRef100_A9XWA9 DNA-directed RNA polymerase n=1 Tax=Quercus nigra RepID=A9XWA9_9ROSI
Length = 1396
Score = 214 bits (544), Expect = 5e-54
Identities = 121/220 (55%), Positives = 149/220 (67%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVRL-----------------CPD------- 473
SL KDQD++S HSL R+ S+ +N+QVR PD
Sbjct: 494 SLQKDQDKISVHSLSAEGRSISSLSGNNDQVRQKFFSSDIFXVKKKNKSEIPDYSELNRR 553
Query: 472 -HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
HC+ ++P I + LLAK+RRNRFIIP + I ER LMP +S+EIP +GI K
Sbjct: 554 GHCNLIYPVILYENFYLLAKRRRNRFIIPL--QLIPEREKGLMPPSGVSIEIPGNGIFRK 611
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
SILAYFDD QYR ++SGI KY T G HSI +KEDLIEYRG++E KPKYQ+K+DRFFFIP
Sbjct: 612 KSILAYFDDLQYRRKNSGITKYGTTGGHSILKKEDLIEYRGVKELKPKYQMKIDRFFFIP 671
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL ESSSIMV+NNS+IG++T ITLN +SR GGLVRV
Sbjct: 672 EEVHILPESSSIMVQNNSLIGLDTRITLNTRSRAGGLVRV 711
[200][TOP]
>UniRef100_A9XW41 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ailanthus altissima
RepID=A9XW41_AILAL
Length = 1279
Score = 214 bits (544), Expect = 5e-54
Identities = 122/225 (54%), Positives = 152/225 (67%), Gaps = 32/225 (14%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVS--NNQVRL-----------------CPD----- 473
SL KDQDQM+ HSL +R+ S+ +S N+Q R PD
Sbjct: 461 SLHKDQDQMNIHSLSVERRDISSLSLSVNNDQTRHKLFSSDFSAKKEGGILEIPDYSGLN 520
Query: 472 ------HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPID 317
H + +H I + S+LLAK+RRN+F IPF +SI E+ ELMP IS+EIPI
Sbjct: 521 RIIGTGHWNLIHTVILHENSDLLAKRRRNQFFIPF--QSIPEQEKELMPHSGISIEIPIK 578
Query: 316 GIIHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDR 137
GI +NSILAYFDDP+YR +SSGI KY T+G HSI +KEDLIEYRG+++ KPKYQ+K+DR
Sbjct: 579 GIFRRNSILAYFDDPRYRRKSSGITKYGTLGAHSIVKKEDLIEYRGLKKIKPKYQMKIDR 638
Query: 136 FFFIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
FF IP+EVH ESS +MVRNNSIIGV+T ITLN +SRVGGLVR+
Sbjct: 639 FFCIPEEVHTFPESSYVMVRNNSIIGVDTRITLNIRSRVGGLVRM 683
[201][TOP]
>UniRef100_A6YAK1 RNA polymerase beta' subunit (Fragment) n=1 Tax=Choristylis
rhamnoides RepID=A6YAK1_9MAGN
Length = 800
Score = 214 bits (544), Expect = 5e-54
Identities = 117/218 (53%), Positives = 145/218 (66%), Gaps = 26/218 (11%)
Frame = -2
Query: 577 LLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR----------------------LCPDHCH 464
L KDQDQ++ HSL ++ SN ++NNQVR +C D C+
Sbjct: 24 LHKDQDQINLHSLSVERKYISNLSMTNNQVRHKLFSSYRSGKKIPDYSELTVIICTDRCN 83
Query: 463 FMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD----ISVEIPIDGIIHKNS 296
++P I + +LL+K+RRNRFIIPF +SI+ER E MP IS+EIPI+GI +NS
Sbjct: 84 LIYPAILHENYDLLSKRRRNRFIIPF--QSIQEREKEEMPQSDSGISIEIPINGIFRRNS 141
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQE 116
ILAYFDDP+YR +SSGI KY TI HSI +KEDLIEYRG++EFKPKYQ++VDRFFFIP
Sbjct: 142 ILAYFDDPRYRRKSSGITKYGTIEAHSIVKKEDLIEYRGVKEFKPKYQMQVDRFFFIPXX 201
Query: 115 VHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
RNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 202 XXXXXXXXXXXXRNNSIIGVDTRITLNXRSRVGGLVRV 239
[202][TOP]
>UniRef100_A1XKF3 RNA polymerase beta chain (Fragment) n=1 Tax=Hedycarya arborea
RepID=A1XKF3_9MAGN
Length = 761
Score = 214 bits (544), Expect = 5e-54
Identities = 123/217 (56%), Positives = 152/217 (70%), Gaps = 27/217 (12%)
Frame = -2
Query: 571 KDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------LCPDHC------ 467
KDQDQM+ HS+ +R S+ ++N++VR PD
Sbjct: 2 KDQDQMNVHSVE--RRYISDLSMTNDRVRHKLFRSDPYGKKGGRVLDYSGPDRIISKGLW 59
Query: 466 HFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKNSI 293
+F++P I + S+LLAK+RRNRFIIPF +S +ER ELMP IS+EIPI+GI+ +NSI
Sbjct: 60 NFIYPAILHENSDLLAKRRRNRFIIPF--QSDQEREKELMPRSGISIEIPINGILRRNSI 117
Query: 292 LAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEV 113
LAYFDDP+YR SSGI KY TIG+ SI +KEDLIEYR + F+PKYQ+KVDRFFFIP+EV
Sbjct: 118 LAYFDDPRYRRSSSGITKYGTIGVGSIVKKEDLIEYRRAKGFRPKYQMKVDRFFFIPEEV 177
Query: 112 HILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
HIL SS IMVRNNSIIGV+T I LN +SRVGGLVRV
Sbjct: 178 HILPGSSPIMVRNNSIIGVDTRIALNTRSRVGGLVRV 214
[203][TOP]
>UniRef100_A9XWC4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Thymelaea sanamunda
RepID=A9XWC4_9ROSI
Length = 1285
Score = 213 bits (543), Expect = 7e-54
Identities = 119/222 (53%), Positives = 155/222 (69%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR---LCPD--------------------- 473
SL KDQDQ++ HS T +R S+F V+++Q R L D
Sbjct: 460 SLHKDQDQINIHSTSTERRYISSFSVNDDQERHKFLSSDFFDKKEDILFDYSKFNRIVGT 519
Query: 472 -HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP----DISVEIPIDGII 308
H HF++ TI + S LLAK+RR+RF+IP +SI+E+ E +P IS+EIPI+GI
Sbjct: 520 GHYHFLYSTILRENSYLLAKRRRHRFLIP--VQSIQEQEKEFIPYPGSGISIEIPINGIF 577
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+ SILA+FDD QYR +SGI KY T+G+HSI +KE++IEY G ++FK KYQ+KVD+FFF
Sbjct: 578 RRKSILAFFDDSQYRRNNSGITKYGTVGVHSIIKKENVIEYGGGKKFKQKYQMKVDQFFF 637
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHILSESSSIMVRNNS+IGVNT ITLN +S++GGLVRV
Sbjct: 638 IPEEVHILSESSSIMVRNNSLIGVNTQITLNTRSQMGGLVRV 679
[204][TOP]
>UniRef100_Q06RE1 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Jasminum
nudiflorum RepID=RPOC2_JASNU
Length = 1397
Score = 213 bits (542), Expect = 9e-54
Identities = 115/222 (51%), Positives = 147/222 (66%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR---------------------------L 482
S KDQDQM+ HS +R TSN +N+ R L
Sbjct: 494 SFHKDQDQMNAHSPSIKRRYTSNLSETNDPERQKLFSSYFYGKKKKKNRISDYSNLNQIL 553
Query: 481 CPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGII 308
C HC+F+ PT S+L +K+R+N+F+IP +SI+E N+LMP IS+EIP +G
Sbjct: 554 CTGHCNFISPTTLHQNSDLFSKRRKNKFLIPL--QSIQEPENKLMPRSSISIEIPQNGTF 611
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
NSILAYFDDP+YR + SGI +Y TI +HSI +KEDL+EYRG++ F+PKYQ+KVDR FF
Sbjct: 612 RGNSILAYFDDPRYRRKGSGIPQYGTIEMHSIVKKEDLVEYRGVKAFRPKYQMKVDRLFF 671
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHIL SSSIMVRNNS+IGV+T +TLN +SRVGG VRV
Sbjct: 672 IPEEVHILPRSSSIMVRNNSLIGVDTQLTLNIRSRVGGFVRV 713
[205][TOP]
>UniRef100_A1XKF2 RNA polymerase beta chain (Fragment) n=1 Tax=Mauloutchia chapelieri
RepID=A1XKF2_9MAGN
Length = 759
Score = 213 bits (541), Expect = 1e-53
Identities = 117/215 (54%), Positives = 144/215 (66%), Gaps = 25/215 (11%)
Frame = -2
Query: 571 KDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCPDHC 467
KDQDQM+ +SL +R S+ V N++VR + H
Sbjct: 2 KDQDQMNVYSLSVERRYISDLSVINDRVRHKLFSSDTSGKKGGRILDYSGPDGIISNGHW 61
Query: 466 HFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISVEIPIDGIIHKNSILA 287
+F++P I + S LLAK+RRNRFIIPF + RE+ IS+EIPIDGI+ +NSILA
Sbjct: 62 NFLYPAILQENSGLLAKRRRNRFIIPFQYDQEREKELMYRSGISIEIPIDGILRRNSILA 121
Query: 286 YFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEVHI 107
YFDDP+YR SSGI KY I + SI +KEDLIEYR +EF+PKYQ+KVDRFFFIP+EVHI
Sbjct: 122 YFDDPRYRRSSSGITKYGAIEVDSIVKKEDLIEYR--KEFRPKYQMKVDRFFFIPEEVHI 179
Query: 106 LSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
L SS IMV+NNSIIGV+T I LN +SRVGGLVRV
Sbjct: 180 LPGSSPIMVKNNSIIGVDTRIALNTRSRVGGLVRV 214
[206][TOP]
>UniRef100_A1XKC3 RNA polymerase beta chain (Fragment) n=1 Tax=Pleea tenuifolia
RepID=A1XKC3_9LILI
Length = 821
Score = 213 bits (541), Expect = 1e-53
Identities = 121/221 (54%), Positives = 150/221 (67%), Gaps = 29/221 (13%)
Frame = -2
Query: 577 LLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR---------------------LCPDHC-- 467
L KDQDQM+ HS +R S+ ++N++VR PD
Sbjct: 1 LHKDQDQMNVHSFSIEERYISDLSMTNDRVRHKLFSFSSGPSGKKSRGILDYSRPDRIIS 60
Query: 466 ----HFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDI--SVEIPIDGIIH 305
+F++ I + S+ LAK+RRNRFIIP + +ER EL+P S+EIPI+GI+H
Sbjct: 61 NGDWNFIYSYILHENSDFLAKRRRNRFIIPLQYD--QEREKELIPPFGSSIEIPINGILH 118
Query: 304 KNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFI 125
+NSILAYFDDP+YR SSGI KY TI + SI +KEDLIEY+G +EF PKYQ+KVDRFFFI
Sbjct: 119 RNSILAYFDDPRYRRSSSGITKYGTIEVDSIVKKEDLIEYQGAKEFSPKYQMKVDRFFFI 178
Query: 124 PQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
P+EVHIL SSSIMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 179 PEEVHILPGSSSIMVRNNSIIGVDTRITLNTRSRVGGLVRV 219
[207][TOP]
>UniRef100_A1XKC0 RNA polymerase beta chain (Fragment) n=1 Tax=Kadsura japonica
RepID=A1XKC0_9MAGN
Length = 787
Score = 213 bits (541), Expect = 1e-53
Identities = 119/216 (55%), Positives = 145/216 (67%), Gaps = 27/216 (12%)
Frame = -2
Query: 568 DQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCPDHCH 464
DQDQM+ SL +R+ SN V+N+ VR L H
Sbjct: 1 DQDQMNLQSLSVEQRSISNLSVNNDLVRHKLFDSDPSGKRRERIFGYSGPDRILSNGHWD 60
Query: 463 FMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKNSIL 290
F +P I D SNLLAK+RRNRFII F + +ER EL P I ++IPI+GI+ +NSIL
Sbjct: 61 FRYPAILHDNSNLLAKRRRNRFIIAF--QHAQEREKELSPRSGIEIQIPINGILRRNSIL 118
Query: 289 AYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEVH 110
AYFDDP+YR SSGI KY TI + SI +K+DLIEYRG +E +PKYQ+KV+RFFFIP+EVH
Sbjct: 119 AYFDDPRYRRSSSGITKYGTIEVDSIVKKDDLIEYRGAKELRPKYQMKVNRFFFIPEEVH 178
Query: 109 ILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IL SS IMVRNNSIIGV+T ITLN +SR+GGLVRV
Sbjct: 179 ILPGSSPIMVRNNSIIGVDTRITLNTRSRIGGLVRV 214
[208][TOP]
>UniRef100_A1XK86 RNA polymerase beta chain (Fragment) n=1 Tax=Saururus cernuus
RepID=A1XK86_SAUCE
Length = 827
Score = 213 bits (541), Expect = 1e-53
Identities = 117/218 (53%), Positives = 145/218 (66%), Gaps = 25/218 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R+ S+F V+N++VR +
Sbjct: 10 SLHKDQDQMNIHSLSLEQRSISDFSVTNDRVRHELFRSDPSSKGEDGILDYSGPDQSISN 69
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISVEIPIDGIIHKNS 296
+F++ I + S+LLAK+RRNRFIIPF + E+ IS+EIPI GI+ +NS
Sbjct: 70 GRWNFIYTAILHENSDLLAKRRRNRFIIPFQYSQEGEKEPMACSGISIEIPITGILRRNS 129
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQE 116
ILAYFDDP+YR SSGI KY T+ + SI +KEDLIEYRG +E + KYQ KVDRFFFIP+E
Sbjct: 130 ILAYFDDPRYRRSSSGITKYGTVEVDSIVKKEDLIEYRGAKELRSKYQTKVDRFFFIPEE 189
Query: 115 VHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
VHIL SS IMVRNNSIIGV+T I LN +SRVGGLVRV
Sbjct: 190 VHILPGSSPIMVRNNSIIGVDTRIALNTRSRVGGLVRV 227
[209][TOP]
>UniRef100_A1XK78 RNA polymerase beta chain (Fragment) n=1 Tax=Sparganium americanum
RepID=A1XK78_SPAAM
Length = 834
Score = 213 bits (541), Expect = 1e-53
Identities = 119/218 (54%), Positives = 150/218 (68%), Gaps = 25/218 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-----------------------LCPDH 470
SL KDQDQM+ S R S+F ++N+QVR + H
Sbjct: 20 SLHKDQDQMNVDSFSVEGRYISDFSMTNHQVRHKLLYTSDKKDREILDYSRPDRIISNGH 79
Query: 469 CHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKNS 296
+F++P+I + SNLLAKKRR+RFIIP + +ER EL+P IS+EIPI+GI+ + S
Sbjct: 80 WNFIYPSILQENSNLLAKKRRDRFIIPLQYD--QEREKELIPCFGISIEIPINGILRRKS 137
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQE 116
ILAYFDDP+YR SSGI K+ TI + SI +KEDLIEYRG +EF PKYQ+KVD+FFFI +E
Sbjct: 138 ILAYFDDPRYRRNSSGITKHGTIEVDSIIKKEDLIEYRGAKEFSPKYQMKVDQFFFILEE 197
Query: 115 VHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
VHIL SS IMVRNNSIIGV+T +T+N +SRVGGLVRV
Sbjct: 198 VHILPGSSFIMVRNNSIIGVDTRLTINTRSRVGGLVRV 235
[210][TOP]
>UniRef100_Q09X27 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Morus indica
RepID=RPOC2_MORIN
Length = 1389
Score = 213 bits (541), Expect = 1e-53
Identities = 126/225 (56%), Positives = 150/225 (66%), Gaps = 32/225 (14%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSN-FLVSNNQVR--------------------------- 485
S+ KDQDQ + + L AK N F V+N+Q +
Sbjct: 494 SIHKDQDQTNVYFLSAAKGKARNSFSVNNDQDQGKHKFFTSGLSGKKESGIPDYSEFNRI 553
Query: 484 LCPDHCHFMHPTISPDTSN--LLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPID 317
L DH + + P+I S+ LLAK+RRNRFIIPF + I+ER EL P IS+EIPI+
Sbjct: 554 LDTDHSNLIFPSILHKDSDLFLLAKRRRNRFIIPFQW--IQEREKELWPRSSISIEIPIN 611
Query: 316 GIIHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDR 137
GI KNSILAYFDD QYR + SGI KY IG+HSI +KEDLIEY G++EFKPKYQ KVD+
Sbjct: 612 GIFRKNSILAYFDDLQYRRKGSGITKYGAIGLHSILKKEDLIEYGGVKEFKPKYQTKVDQ 671
Query: 136 FFFIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
FFFIP+EVHIL ES SIMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 672 FFFIPEEVHILPESFSIMVRNNSIIGVDTRITLNTRSRVGGLVRV 716
[211][TOP]
>UniRef100_B9NFC6 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9NFC6_POPTR
Length = 286
Score = 212 bits (540), Expect = 1e-53
Identities = 115/207 (55%), Positives = 147/207 (71%), Gaps = 22/207 (10%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR----------------------LCPDHC 467
SL KDQDQ++ HSL + SN V+N++V+ +C
Sbjct: 85 SLHKDQDQINVHSLSVERGYISNPSVNNDKVKHKFFIKVKKKSRILDYSDLNRMICTG-- 142
Query: 466 HFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISVEIPIDGIIHKNSILA 287
F++PTI + S+LLAK+R+NRFIIPF +SI+E+ DI +EIPI+GI +NSI A
Sbjct: 143 -FIYPTILHENSDLLAKRRKNRFIIPF--QSIQEKELMSHSDILIEIPINGIFRRNSIFA 199
Query: 286 YFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEVHI 107
YFDDPQYR +SSGI KY IG+HSI +KEDL+EYRG++EF+PKYQ+KVDRFFFIP+EV+I
Sbjct: 200 YFDDPQYRRKSSGITKYVAIGVHSIVKKEDLVEYRGVKEFQPKYQMKVDRFFFIPEEVYI 259
Query: 106 LSESSSIMVRNNSIIGVNTPITLNKKS 26
L ESSS+MVRNNSIIGV+T ITLN KS
Sbjct: 260 LPESSSLMVRNNSIIGVDTQITLNTKS 286
[212][TOP]
>UniRef100_A1XKD4 RNA polymerase beta chain (Fragment) n=1 Tax=Myristica fragrans
RepID=A1XKD4_MYRFG
Length = 774
Score = 212 bits (540), Expect = 1e-53
Identities = 118/217 (54%), Positives = 144/217 (66%), Gaps = 25/217 (11%)
Frame = -2
Query: 577 LLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCPD 473
L KDQDQM+ HSL +R S+ V N++VR +
Sbjct: 1 LHKDQDQMNVHSLSVERRYISDLSVINDRVRHKLFSSDTSGKKGGRILDYSGPDGIISNG 60
Query: 472 HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISVEIPIDGIIHKNSI 293
H +F++P I + S LLAK+RRNRFIIPF + RE+ IS+EIPIDGI+ +NSI
Sbjct: 61 HWNFLYPAILQENSGLLAKRRRNRFIIPFQYDQEREKELMSRSGISIEIPIDGILRRNSI 120
Query: 292 LAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEV 113
LAYFDDP+YR SSGI KY I + SI +KEDLIEYR +EF+PKYQ+KVD FFFIP+EV
Sbjct: 121 LAYFDDPRYRRSSSGITKYGAIEVDSIVKKEDLIEYR--KEFRPKYQMKVDPFFFIPEEV 178
Query: 112 HILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
HIL SS IMV+NNSIIGV+T I LN +SRVGGLVRV
Sbjct: 179 HILPGSSPIMVKNNSIIGVDTRIALNTRSRVGGLVRV 215
[213][TOP]
>UniRef100_A1XK91 RNA polymerase beta chain (Fragment) n=1 Tax=Lomandra obliqua
RepID=A1XK91_9ASPA
Length = 862
Score = 212 bits (540), Expect = 1e-53
Identities = 119/222 (53%), Positives = 149/222 (67%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ H +R S+ ++N+QVR +
Sbjct: 45 SLHKDQDQMNVHYFSVDERYISDLSITNDQVRHKLLDLSGTSKKDREILDYSRLDRIVSN 104
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
H +F++P+I + + LAK+RRNRF+IP + +ER EL+P IS+EIPI+GI+ +
Sbjct: 105 SHWNFIYPSILQENYDFLAKRRRNRFLIPLQYD--QEREKELIPSFSISIEIPINGILRR 162
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR +SSGI KY TI SI +KEDLIEYRG +EF PKYQ+KVDRFFFIP
Sbjct: 163 NSILAYFDDPRYRRKSSGITKYSTIEADSIVKKEDLIEYRGTKEFSPKYQMKVDRFFFIP 222
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSR--VGGLVRV 2
+EVHIL SSSIMVRNNSIIGVNT + LN +R VGGLVRV
Sbjct: 223 EEVHILPGSSSIMVRNNSIIGVNTQLALNTNTRSLVGGLVRV 264
[214][TOP]
>UniRef100_A1XK79 RNA polymerase beta chain (Fragment) n=1 Tax=Vriesea splendens
RepID=A1XK79_9POAL
Length = 849
Score = 212 bits (540), Expect = 1e-53
Identities = 120/218 (55%), Positives = 148/218 (67%), Gaps = 25/218 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-----------------------LCPDH 470
SL KDQDQM+ +SL +R SN ++N+QVR + DH
Sbjct: 35 SLHKDQDQMNVYSLSVEERYISNPSMTNDQVRHKLLDTSGKKDREILDYSRLDRIIPNDH 94
Query: 469 CHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKNS 296
+ ++P+I + + LAKKRRNRFIIP + +ER EL+P IS+EIPI+GI+ NS
Sbjct: 95 WNLIYPSILQENPDFLAKKRRNRFIIPLQYD--QEREKELIPCFGISIEIPINGILRGNS 152
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQE 116
ILAYFDDP+YR SSGI KY TI + SI +KEDL EYRG +EF PKYQ+KVDRFFFI +E
Sbjct: 153 ILAYFDDPRYRRSSSGITKYGTIEVDSIIKKEDLFEYRGAKEFSPKYQMKVDRFFFILEE 212
Query: 115 VHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
VHIL SS IMVRNNSIIGV+T + LN +SRVGGLVRV
Sbjct: 213 VHILPGSSLIMVRNNSIIGVDTRLALNTRSRVGGLVRV 250
[215][TOP]
>UniRef100_Q4FFY5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Yucca schidigera
RepID=Q4FFY5_9ASPA
Length = 1384
Score = 212 bits (539), Expect = 2e-53
Identities = 118/220 (53%), Positives = 152/220 (69%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-----------------------LCPDH 470
SL KDQDQM+ H + + S+ ++N++VR + H
Sbjct: 493 SLHKDQDQMNVHFFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILDYSRLDRIISNGH 552
Query: 469 CHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKNS 296
+F++P+I + S+ LAKKRRNRF+IP + +ER EL+P +IS+EIPI+GI+ +NS
Sbjct: 553 WNFIYPSILQENSDFLAKKRRNRFLIPLQYD--QEREKELIPSFNISIEIPINGILRRNS 610
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQE 116
ILAYFDDP+YR +SSGI KY T+ SI +KEDLIEYRG +EF PKYQ+KVDRFFFIP+E
Sbjct: 611 ILAYFDDPRYRRKSSGIIKYGTVEADSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEE 670
Query: 115 VHILSESSSIMVRNNSIIGVNTPITL--NKKSRVGGLVRV 2
VHIL SSSIMVRNNSIIGV+T + L N +SRVGGLVRV
Sbjct: 671 VHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRV 710
[216][TOP]
>UniRef100_A9XW98 DNA-directed RNA polymerase (Fragment) n=1 Tax=Myrtus communis
RepID=A9XW98_9MYRT
Length = 1284
Score = 211 bits (538), Expect = 3e-53
Identities = 117/224 (52%), Positives = 149/224 (66%), Gaps = 31/224 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--LC-------------PD--------- 473
SL KDQDQM+ SL +R S+ ++N+Q+R LC PD
Sbjct: 464 SLYKDQDQMNLRSLSVKRRYISSLSMNNDQMRYELCSSSFSGKLKEDRIPDYSELNRILS 523
Query: 472 --HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD-----ISVEIPIDG 314
HC+ +PT + S+ LA++RRNRF+IP IS+E+PI+G
Sbjct: 524 IVHCNLKYPTTFHENSDFLAQRRRNRFLIPXXXXXXXXXXXXXXXXLPHSGISIELPING 583
Query: 313 IIHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRF 134
I+ +NSILAYFDDP+YR +SSGI KY T+G+HSI +KEDLIEYRGI+EF KYQ+K++RF
Sbjct: 584 ILRRNSILAYFDDPRYRRKSSGITKYGTLGVHSIVKKEDLIEYRGIKEFNQKYQMKLNRF 643
Query: 133 FFIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
FFIP+EVHIL ESSSIMVRNNS+IGV+T I LN +SRVGGLVRV
Sbjct: 644 FFIPEEVHILPESSSIMVRNNSLIGVDTRIALNTRSRVGGLVRV 687
[217][TOP]
>UniRef100_A9XW59 DNA-directed RNA polymerase (Fragment) n=1 Tax=Celtis occidentalis
RepID=A9XW59_9ROSA
Length = 1259
Score = 211 bits (538), Expect = 3e-53
Identities = 122/222 (54%), Positives = 154/222 (69%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------LCPD---------- 473
S+ KDQDQ + + +++S +V+N+Q + PD
Sbjct: 459 SIHKDQDQTNVYFRSAKGKSSSVNIVNNDQEKDKFFSSNLSGKKESSIPDYSELNQIIDR 518
Query: 472 -HCHFMHPTISPDTSN--LLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGII 308
H + + +I + S+ LLAK+RRNRFIIPF + I+ER EL+P +IS+EIPI+GI
Sbjct: 519 GHWNLILTSILHNNSDFFLLAKRRRNRFIIPFKW--IQEREKELIPRSNISIEIPINGIF 576
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+NSILAYFDDPQYR +SSGI KY IG+HSI +KEDLIEY G++E KPKYQ KVDRFFF
Sbjct: 577 RRNSILAYFDDPQYRRKSSGITKYGAIGLHSILKKEDLIEYVGVKELKPKYQTKVDRFFF 636
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHIL ESSSIMVRNNSIIG++T ITLN +SRVGGLVRV
Sbjct: 637 IPEEVHILPESSSIMVRNNSIIGIDTQITLNTRSRVGGLVRV 678
[218][TOP]
>UniRef100_A9XW50 DNA-directed RNA polymerase (Fragment) n=1 Tax=Bixa orellana
RepID=A9XW50_BIXOR
Length = 1266
Score = 211 bits (538), Expect = 3e-53
Identities = 115/223 (51%), Positives = 152/223 (68%), Gaps = 30/223 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR---------------------------- 485
S+ KDQDQ++ HSL +R S+ V+N+Q R
Sbjct: 460 SIHKDQDQINIHSLSAERRYISSLSVNNDQARHKLFSSGFSDKNDKKKGRISDYSEFNRI 519
Query: 484 LCPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGI 311
+ HC+ ++ I + S+LL K+RRNRFIIPF +SI+E++ EL+P IS+EIP++GI
Sbjct: 520 INTGHCNSLYSAIPHENSDLLGKRRRNRFIIPF--QSIQEQDKELIPQSGISIEIPMNGI 577
Query: 310 IHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFF 131
H+NSILA+FDD +YR +SSGI KY TIG HSI +KE ++EYRG+++ KPKYQ+KVDRFF
Sbjct: 578 FHRNSILAFFDDLRYRRKSSGIIKYGTIGAHSIVKKEGVVEYRGVKKVKPKYQMKVDRFF 637
Query: 130 FIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
FIP+EVHIL ESS IMVRNNSII +T I LN +S+VGGL RV
Sbjct: 638 FIPEEVHILPESSYIMVRNNSIIRADTQIALNIRSQVGGLARV 680
[219][TOP]
>UniRef100_Q4FFY8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nuphar advena
RepID=Q4FFY8_NUPAD
Length = 1390
Score = 211 bits (537), Expect = 3e-53
Identities = 121/223 (54%), Positives = 147/223 (65%), Gaps = 30/223 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------------------LC 479
SL KDQDQM+ SL +R S+F V+NN+VR +
Sbjct: 493 SLHKDQDQMNVQSLSVQERYISDFSVNNNRVRHKLFGSDPLAKRGQRISDYAAGFERVIS 552
Query: 478 PDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP----DISVEIPIDGI 311
H F++P I + S LLAK+RRNRFIIPF + ER EL P I+VEIP +GI
Sbjct: 553 NGHWDFIYPAILRENSYLLAKRRRNRFIIPFQYDP--EREKELTPRSSTSIAVEIPANGI 610
Query: 310 IHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFF 131
+ +NSILAYFDDP+YR SSGI KY TI + SI +KE LIEYRG +E +PKYQ+KVDRFF
Sbjct: 611 LRRNSILAYFDDPRYRRSSSGITKYGTIEVDSIVKKEGLIEYRGPKESRPKYQMKVDRFF 670
Query: 130 FIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHIL SSSIMVRNNSIIGV+T IT N +S++GGLVRV
Sbjct: 671 VIPEEVHILPGSSSIMVRNNSIIGVDTRITFNTRSQIGGLVRV 713
[220][TOP]
>UniRef100_A9XWC6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tropaeolum majus
RepID=A9XWC6_TROMA
Length = 1274
Score = 211 bits (537), Expect = 3e-53
Identities = 120/220 (54%), Positives = 153/220 (69%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ +SL +R S+ V+N+QVR +
Sbjct: 459 SLHKDQDQMNINSLSVERRYISSLSVNNDQVRHKFFSSGFSDKKKCRIADYLEFNRIIGI 518
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
HC+ ++ I + S+LLAK+RRNRFIIP F+SI+E+ ELMP IS+EI I+GI +
Sbjct: 519 GHCNLIYSAILHENSDLLAKRRRNRFIIP--FQSIQEQEKELMPRSGISIEIYINGIFRR 576
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILA+FDD +YR +SSGI KY TIG HSI +K+D+IEYR +++ K KYQ+KVD FFFIP
Sbjct: 577 NSILAFFDDLRYRRKSSGILKYGTIGAHSIVKKDDVIEYREVKKCKTKYQMKVDLFFFIP 636
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL ESSSIMVRNNSIIGV+T I LN +S+VGGLVRV
Sbjct: 637 EEVHILPESSSIMVRNNSIIGVDTRIALNTRSQVGGLVRV 676
[221][TOP]
>UniRef100_A1XK32 RNA polymerase beta chain (Fragment) n=1 Tax=Nuphar sp. YLQ-2003
RepID=A1XK32_9MAGN
Length = 839
Score = 211 bits (537), Expect = 3e-53
Identities = 121/223 (54%), Positives = 147/223 (65%), Gaps = 30/223 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR--------------------------LC 479
SL KDQDQM+ SL +R S+F V+NN+VR +
Sbjct: 16 SLHKDQDQMNVQSLSVQERYISDFSVNNNRVRHKLFGSDPLAKRGQRISDYAAGFERVIS 75
Query: 478 PDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP----DISVEIPIDGI 311
H F++P I + S LLAK+RRNRFIIPF + ER EL P I+VEIP +GI
Sbjct: 76 NGHWDFIYPAILRENSYLLAKRRRNRFIIPFQYDP--EREKELTPRSSTSIAVEIPANGI 133
Query: 310 IHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFF 131
+ +NSILAYFDDP+YR SSGI KY TI + SI +KE LIEYRG +E +PKYQ+KVDRFF
Sbjct: 134 LRRNSILAYFDDPRYRRSSSGITKYGTIEVDSIVKKEGLIEYRGPKESRPKYQMKVDRFF 193
Query: 130 FIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP+EVHIL SSSIMVRNNSIIGV+T IT N +S++GGLVRV
Sbjct: 194 VIPEEVHILPGSSSIMVRNNSIIGVDTRITFNTRSQIGGLVRV 236
[222][TOP]
>UniRef100_A1XK26 RNA polymerase beta chain (Fragment) n=1 Tax=Potamogeton
berchtoldii RepID=A1XK26_9LILI
Length = 863
Score = 211 bits (537), Expect = 3e-53
Identities = 120/219 (54%), Positives = 147/219 (67%), Gaps = 26/219 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQ++ S + +SNF +SN++VR +
Sbjct: 45 SLHKDQDQINVDSFSIKGKYSSNFSMSNDRVRNPFFSSKLLSKKKGEGLDYSRSDRIISK 104
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSI-RERNNELMPDISVEIPIDGIIHKN 299
H +F+ P+I + S+LLAK+RRNR IIP + RE+ L IS+EIPI+GI+ +N
Sbjct: 105 GHWNFLCPSILQENSSLLAKRRRNRLIIPLQYYDPKREKELLLHFGISIEIPINGILRRN 164
Query: 298 SILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQ 119
SILAYFDDP+YR SSGI KY TI S+F+KEDLIEYRG +EF KYQ+KVDRFFFIP+
Sbjct: 165 SILAYFDDPRYRRSSSGIIKYGTIEADSVFKKEDLIEYRGTKEFNSKYQMKVDRFFFIPE 224
Query: 118 EVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
EVHIL SS IMVRNNSIIGVNT ITLN +SRVGGLVRV
Sbjct: 225 EVHILPGSSFIMVRNNSIIGVNTQITLNIRSRVGGLVRV 263
[223][TOP]
>UniRef100_Q4FFY6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Typha latifolia
RepID=Q4FFY6_TYPLA
Length = 1387
Score = 211 bits (536), Expect = 4e-53
Identities = 118/218 (54%), Positives = 149/218 (68%), Gaps = 25/218 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-----------------------LCPDH 470
SL KDQDQM+ S R S+F ++N+QVR + H
Sbjct: 493 SLHKDQDQMNVDSFSVEGRYISDFSMTNDQVRHKLLYTSYKKDREILDYSRPDQIISNSH 552
Query: 469 CHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKNS 296
+F++P+I + S+ LAKKRR+RFIIP + +E+ EL+P IS+EIPI+GI+ + S
Sbjct: 553 WNFIYPSILQENSDFLAKKRRDRFIIPLQYD--QEQEKELIPCFGISIEIPINGILRRKS 610
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQE 116
ILAYFDDP+YR SSGI KY TI + SI +KEDLIEYRG +EF PKYQ+KVD+FFFI +E
Sbjct: 611 ILAYFDDPRYRRNSSGITKYGTIEVDSIIKKEDLIEYRGTKEFSPKYQMKVDQFFFILEE 670
Query: 115 VHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
VHIL SS IMVRNNSIIGV+T +TLN +SRVGGLVRV
Sbjct: 671 VHILPGSSFIMVRNNSIIGVDTRLTLNTRSRVGGLVRV 708
[224][TOP]
>UniRef100_Q589B8 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Silene latifolia
RepID=RPOC2_SILLA
Length = 1373
Score = 211 bits (536), Expect = 4e-53
Identities = 121/220 (55%), Positives = 153/220 (69%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR---LCP---------------------D 473
SL KDQDQ + +SL + ++ N ++N+QV+ L P
Sbjct: 490 SLHKDQDQTTGNSL-SFEQKIYNLSMTNDQVQNKFLDPYIKKSSKKEDRSPNYSELNGMS 548
Query: 472 HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP---DISVEIPIDGIIHK 302
HC+ ++P S+LLAK+R+NR IIPF F+ +ER ELM IS+EIPI+GI +
Sbjct: 549 HCNHIYPA---KNSDLLAKRRKNRLIIPFQFQLSQEREKELMSLSNGISIEIPINGIFRR 605
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSI AYF+DP+YRT+SSGI KY+TI HS +KEDLIEYRG++EF+PKYQ+KVDRFFFI
Sbjct: 606 NSIFAYFNDPRYRTKSSGITKYETIETHSSVKKEDLIEYRGVKEFRPKYQMKVDRFFFIS 665
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
QEVHIL SSSIMVRNNSIIGV+T ITLN +SRVGG+VRV
Sbjct: 666 QEVHILPGSSSIMVRNNSIIGVDTQITLNTRSRVGGVVRV 705
[225][TOP]
>UniRef100_A7Y3B4 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Ipomoea purpurea
RepID=RPOC2_IPOPU
Length = 1401
Score = 211 bits (536), Expect = 4e-53
Identities = 122/229 (53%), Positives = 153/229 (66%), Gaps = 36/229 (15%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
S+ +DQDQ S HSL +R+ SN +N++ R +C
Sbjct: 494 SIHRDQDQKSAHSLFVKRRSISNLSETNDRARQKIFSAHFSGQKEDRIADYSDLNRIICT 553
Query: 475 DHCHFMHPTISPDT-------SNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIP 323
DH + ++P I P SNLL+K+RRN+FIIP +SI+ER ELMP IS++IP
Sbjct: 554 DHSNLVYPAILPILAENSDFLSNLLSKRRRNQFIIPL--QSIQERKKELMPCSGISMKIP 611
Query: 322 IDGIIHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKV 143
+GI NSI+AYFDDP+YR SSG KY T+ +HSI +KEDLI+YRG+REF+PK+Q KV
Sbjct: 612 TNGIFCGNSIIAYFDDPRYRRMSSGSTKYGTLEMHSIVKKEDLIQYRGVREFRPKHQKKV 671
Query: 142 DRFFFIPQEVHIL--SESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
DRFFFIP+EVHIL S S SIMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 672 DRFFFIPEEVHILPGSSSISIMVRNNSIIGVDTQITLNIRSRVGGLVRV 720
[226][TOP]
>UniRef100_A1XK72 RNA polymerase beta chain (Fragment) n=1 Tax=Asparagus officinalis
RepID=A1XK72_ASPOF
Length = 860
Score = 210 bits (535), Expect = 6e-53
Identities = 117/222 (52%), Positives = 150/222 (67%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HS +R S+ ++N+QVR +
Sbjct: 39 SLHKDQDQMNVHSFSVDERYISDLSITNDQVRHKLLDLSGTLKKDREIIDYSRLDRIISN 98
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
H +F++P+I + S+ LAK+RRNRF+IP + +ER EL+P IS+EIP G++ +
Sbjct: 99 SHWNFIYPSILQENSDFLAKRRRNRFLIPLQYD--QEREKELIPSFGISIEIPNFGVLRR 156
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSI+AYFDDP+YR +SSGI KY T+ + SI +KEDLIEYRG +EF PKYQ+KVDRFFFIP
Sbjct: 157 NSIIAYFDDPRYRRKSSGITKYGTVEVDSIGKKEDLIEYRGAKEFSPKYQMKVDRFFFIP 216
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITL--NKKSRVGGLVRV 2
+EVHIL SS IMVRNNSIIGV+T + L N KSRVGGLVRV
Sbjct: 217 EEVHILPGSSFIMVRNNSIIGVDTQLALNTNTKSRVGGLVRV 258
[227][TOP]
>UniRef100_A1XK30 RNA polymerase beta chain (Fragment) n=1 Tax=Acorus calamus
RepID=A1XK30_ACOCL
Length = 838
Score = 210 bits (535), Expect = 6e-53
Identities = 117/220 (53%), Positives = 149/220 (67%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQ + HS +R S+ ++N++VR +
Sbjct: 21 SLHKDQDQTNAHSFSVERRYISDLSMTNDRVRHKLFSSDLSGKRGDRILDYSRPDQIISK 80
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
H +F++P+I + S+ LAK+R+NRFIIPF + +E EL+P IS+EIPI+GI+ +
Sbjct: 81 GHWNFIYPSILHENSDFLAKRRKNRFIIPFQYD--QEGEKELIPHSGISIEIPINGILRR 138
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDD +YR SSGI KY T+ I SI +KED IEYRG +EF KYQ+KVDRFFFIP
Sbjct: 139 NSILAYFDDTRYRRSSSGITKYGTVEIDSIVKKEDFIEYRGTKEFSSKYQMKVDRFFFIP 198
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSSIMVRNNS+IGV+T ITLN +SRVGGLVRV
Sbjct: 199 EEVHILPGSSSIMVRNNSLIGVDTRITLNIRSRVGGLVRV 238
[228][TOP]
>UniRef100_A1XKE8 RNA polymerase beta chain (Fragment) n=1 Tax=Cinnamodendron ekmanii
RepID=A1XKE8_9MAGN
Length = 745
Score = 210 bits (534), Expect = 7e-53
Identities = 104/157 (66%), Positives = 125/157 (79%)
Frame = -2
Query: 472 HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISVEIPIDGIIHKNSI 293
H +FM P I + SN LAK+RRNRF+IPF + RE+ IS+EIPI+GI+ +NSI
Sbjct: 47 HSNFMDPAILYENSNFLAKRRRNRFVIPFQYDQEREKELMSPSAISIEIPINGILRRNSI 106
Query: 292 LAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQEV 113
LAYFDDP+YR SSGI KY T+ + SI +KEDLIEYRG++E PKYQ+KVDRFFFIP+EV
Sbjct: 107 LAYFDDPRYRRSSSGITKYGTVEVDSIVKKEDLIEYRGVKELSPKYQMKVDRFFFIPEEV 166
Query: 112 HILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
HIL SSS+MVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 167 HILPGSSSVMVRNNSIIGVDTRITLNTRSRVGGLVRV 203
[229][TOP]
>UniRef100_A1XK90 RNA polymerase beta chain (Fragment) n=1 Tax=Tacca chantieri
RepID=A1XK90_TACCH
Length = 865
Score = 210 bits (534), Expect = 7e-53
Identities = 118/219 (53%), Positives = 149/219 (68%), Gaps = 26/219 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR----------------------LCPDHC 467
SL KDQDQM+ HS ++ S+ L++N++VR + +
Sbjct: 45 SLHKDQDQMNVHSFSVKEKYISDLLMTNHRVRHKLLDTSGKNNEILEYSIPDRIISNSYW 104
Query: 466 HFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKNSI 293
+F++P+I + S LAK+RRNRF+IP + +ER EL P IS+EIPI+GI+H+NSI
Sbjct: 105 NFIYPSILQENSYFLAKRRRNRFVIPLQYD--QEREKELKPCFGISIEIPINGILHRNSI 162
Query: 292 LAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQI--KVDRFFFIPQ 119
LAYFDDP YR SSGI K+ TI + SI +KEDLIEYRG EF KYQI KVDRFFFIP+
Sbjct: 163 LAYFDDPVYRRSSSGITKHGTIKVDSIVKKEDLIEYRGTEEFSSKYQIQTKVDRFFFIPE 222
Query: 118 EVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
EV+I SSSIMVRNNS+IGVNT +TLN +SRVGGLVRV
Sbjct: 223 EVYIFPGSSSIMVRNNSLIGVNTRLTLNTRSRVGGLVRV 261
[230][TOP]
>UniRef100_A9XW76 DNA-directed RNA polymerase (Fragment) n=1 Tax=Floerkea
proserpinacoides RepID=A9XW76_FLOPR
Length = 1257
Score = 209 bits (533), Expect = 1e-52
Identities = 117/220 (53%), Positives = 150/220 (68%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R S V NQVR +C
Sbjct: 459 SLHKDQDQMNIHSLSVEQRYISRLSV--NQVRNKFFSSDFSDKKNYRIPYYSKVNQIICT 516
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
H + ++ I + S+LLAK RRN F+IPF +S +E+ EL+P IS+EIP +GI +
Sbjct: 517 SHSNLIYSVILHENSDLLAKSRRNTFLIPF--QSSQEQEKELLPYSGISIEIPKNGIFRR 574
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILA+FD+P+YR +SSGI KY TIG S+ +KED+IEYRG+++ K KYQIKVD+FFFIP
Sbjct: 575 NSILAFFDNPRYRRKSSGILKYGTIGAQSVVKKEDMIEYRGVKKLKTKYQIKVDQFFFIP 634
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL ESSSIMVRNNS+IGV+T ITLN +S+VGGLVR+
Sbjct: 635 EEVHILPESSSIMVRNNSLIGVDTQITLNTRSQVGGLVRL 674
[231][TOP]
>UniRef100_A1XK85 RNA polymerase beta chain (Fragment) n=1 Tax=Houttuynia cordata
RepID=A1XK85_HOUCO
Length = 829
Score = 209 bits (533), Expect = 1e-52
Identities = 116/218 (53%), Positives = 144/218 (66%), Gaps = 25/218 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL +R+ S+F V N+++R +
Sbjct: 15 SLHKDQDQMNVHSLSLEQRSISDFSVINDRMRHKLFRSDLSSNRGDGILDYSGPDQSISN 74
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISVEIPIDGIIHKNS 296
+F++ I + S+LLAK+RRNRFIIPF + E+ IS+EIPI GI+ +NS
Sbjct: 75 SRWNFIYTAILHENSDLLAKRRRNRFIIPFQYSQEAEKEPMPCSGISIEIPITGILRRNS 134
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQE 116
ILAYFDD QYR SSGI KY T+ + SI +KEDLIEYRG +E + KYQ KVDRFFFIP+E
Sbjct: 135 ILAYFDDLQYRRSSSGITKYGTVEVDSIVKKEDLIEYRGAKELRSKYQTKVDRFFFIPEE 194
Query: 115 VHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
VHIL SS+IMVRNNSIIGV+T I LN +SRVGGLVRV
Sbjct: 195 VHILPGSSAIMVRNNSIIGVDTQIALNTRSRVGGLVRV 232
[232][TOP]
>UniRef100_A1XKE5 RNA polymerase beta chain (Fragment) n=1 Tax=Cissampelos pareira
RepID=A1XKE5_9MAGN
Length = 774
Score = 209 bits (531), Expect = 2e-52
Identities = 106/163 (65%), Positives = 131/163 (80%), Gaps = 2/163 (1%)
Frame = -2
Query: 484 LCPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGI 311
+C C+F++P I S+LLAK+RRNRFIIPF RS +E+ E++P IS+EIPI+GI
Sbjct: 16 ICKGRCNFIYPAILHGDSDLLAKRRRNRFIIPF--RSNQEQEEEIIPRSGISMEIPINGI 73
Query: 310 IHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFF 131
+NSILAYFDDP+YR SSGI KY T G+HSI +K+ LIEYRG +EF+ KYQ+K+DRFF
Sbjct: 74 FRRNSILAYFDDPRYRRNSSGITKYGTRGVHSIVKKQYLIEYRGTKEFRSKYQMKIDRFF 133
Query: 130 FIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
FIP+EVHIL SSSIMVRNNSIIG++T IT N +SRVGGLVRV
Sbjct: 134 FIPEEVHILPGSSSIMVRNNSIIGMDTQITFNTRSRVGGLVRV 176
[233][TOP]
>UniRef100_A1XKB8 RNA polymerase beta chain (Fragment) n=1 Tax=Lactoris fernandeziana
RepID=A1XKB8_LACFR
Length = 784
Score = 209 bits (531), Expect = 2e-52
Identities = 119/221 (53%), Positives = 148/221 (66%), Gaps = 29/221 (13%)
Frame = -2
Query: 577 LLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCPD 473
L KDQDQM+ HS +R S+ ++N +VR + D
Sbjct: 1 LHKDQDQMNVHSPSVEQRYISDLSLTNGRVRHKLFSSDPFDKKGDRILDYSRPDRIISND 60
Query: 472 HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKN 299
H +F++P I + S+ LAK+RRN FI+PF + +ER ELMP IS+EIPI GI+ KN
Sbjct: 61 HWNFLYPAILHENSDFLAKRRRNGFILPFQYD--QEREKELMPRSGISIEIPITGILRKN 118
Query: 298 SILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKY--QIKVDRFFFI 125
SILAYFDDP+YR SSGI KY TI + SI +KEDLIEY G ++F+P Y Q+KVDRFFFI
Sbjct: 119 SILAYFDDPRYRKSSSGITKYGTIEVDSILKKEDLIEYWGSKKFRPIYQMQMKVDRFFFI 178
Query: 124 PQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
P+EVHIL SSS+MVRNNSIIG+ T ITLN +SRVGGLVRV
Sbjct: 179 PEEVHILPGSSSLMVRNNSIIGIGTRITLNIRSRVGGLVRV 219
[234][TOP]
>UniRef100_A1XK52 RNA polymerase beta chain (Fragment) n=1 Tax=Lamium sp. Qiu 95019
RepID=A1XK52_9LAMI
Length = 866
Score = 209 bits (531), Expect = 2e-52
Identities = 119/220 (54%), Positives = 146/220 (66%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
S+ KDQDQMS +S N S +++Q+R +C
Sbjct: 45 SIHKDQDQMSANSRSVKSFNLSG---ADDQLREKFFTSDFSGKKEDRIPDYSDLSRIICT 101
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHK 302
C+ + PT+ S+L +K+RRNRFIIP +SI+ER N L P DI +EIPI+GI +
Sbjct: 102 GRCNLVDPTLLYHNSDLFSKRRRNRFIIPL--QSIQERENGLTPPSDILIEIPINGIFRR 159
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAY DDP+YR +SSGI KY T+ +HSI +KEDLIEYRG +EF PKYQ KVDRFFFIP
Sbjct: 160 NSILAYLDDPRYRRKSSGITKYGTLEMHSIVKKEDLIEYRGGKEFSPKYQTKVDRFFFIP 219
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSIMVRNNSIIGV+T ITLN +SRV GLVRV
Sbjct: 220 EEVHILPGXSSIMVRNNSIIGVDTKITLNMRSRVAGLVRV 259
[235][TOP]
>UniRef100_A1XK51 RNA polymerase beta chain (Fragment) n=1 Tax=Nicotiana tabacum
RepID=A1XK51_TOBAC
Length = 802
Score = 209 bits (531), Expect = 2e-52
Identities = 104/163 (63%), Positives = 132/163 (80%), Gaps = 2/163 (1%)
Frame = -2
Query: 484 LCPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGI 311
+C + ++ I + S+LL+K+RRN+FIIP SI+E NELMP IS+EIP++GI
Sbjct: 36 ICAGQYNLVYSPILHENSDLLSKRRRNKFIIPL--HSIQELENELMPCSGISIEIPVNGI 93
Query: 310 IHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFF 131
+NSILAYFDDP+YR +SSGI KY T+ HS+ +KEDL+EYRG++EF+PKYQ+KVDRFF
Sbjct: 94 FRRNSILAYFDDPRYRRKSSGIIKYGTVETHSVIKKEDLLEYRGVKEFRPKYQMKVDRFF 153
Query: 130 FIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
FIP+EVHIL SSSIMVRNNSI+GV+T ITLN +SRVGGLVRV
Sbjct: 154 FIPEEVHILPGSSSIMVRNNSIVGVDTQITLNLRSRVGGLVRV 196
[236][TOP]
>UniRef100_Q3V544 DNA-directed RNA polymerase subunit beta'' n=3 Tax=Acorus
RepID=RPOC2_ACOCL
Length = 1386
Score = 209 bits (531), Expect = 2e-52
Identities = 116/220 (52%), Positives = 148/220 (67%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQ + HS +R S+ ++N +VR +
Sbjct: 493 SLHKDQDQTNAHSFSVERRYISDLSMTNGRVRHKLFSSDLSGKRGDRILDYSRPDQIISK 552
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
H +F++P+I + S+ LAK+R+NRFIIPF + +E EL+P IS+EIPI+G++ +
Sbjct: 553 GHWNFIYPSILHENSDFLAKRRKNRFIIPFQYD--QEGEKELIPHSGISIEIPINGMLRR 610
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDD +YR SSGI KY T+ I SI +KED IEYRG +EF KYQ+KVDRFFFIP
Sbjct: 611 NSILAYFDDTRYRRSSSGITKYGTVEIDSIVKKEDFIEYRGTKEFSSKYQMKVDRFFFIP 670
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSSIMVRNNS+IGV+T ITLN +SRVGGLVRV
Sbjct: 671 EEVHILPGSSSIMVRNNSLIGVDTRITLNIRSRVGGLVRV 710
[237][TOP]
>UniRef100_A1XK96 RNA polymerase beta chain (Fragment) n=1 Tax=Beaucarnea recurvata
RepID=A1XK96_BEARE
Length = 830
Score = 208 bits (530), Expect = 2e-52
Identities = 116/222 (52%), Positives = 151/222 (68%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQ Q++ HS +R +S+ ++ ++VR +
Sbjct: 18 SLHKDQIQVNVHSFSVGERYSSDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISN 77
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
H +F++P+I + S+ LAK+RRNRF+IP + +ER EL+P IS+EIPI+GI+ +
Sbjct: 78 GHWNFIYPSILQENSDFLAKRRRNRFLIPLQYD--QEREKELIPSFGISIEIPINGILRR 135
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR +SSGI KY T + SI +KEDLIEYRG +EF PKYQ+KVDRFFFIP
Sbjct: 136 NSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIP 195
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITL--NKKSRVGGLVRV 2
+EVHIL SSSIMVRNNSIIGV+T + L N +SRVGGLVRV
Sbjct: 196 EEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRV 237
[238][TOP]
>UniRef100_A9QBM2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Musa acuminata
RepID=A9QBM2_MUSAC
Length = 1359
Score = 208 bits (529), Expect = 3e-52
Identities = 117/219 (53%), Positives = 147/219 (67%), Gaps = 26/219 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR------------------LCPD------ 473
SL KDQDQM+ +S +R S+ ++N ++R + PD
Sbjct: 489 SLHKDQDQMNVYSFSVEERYISDLSMTNGRIRHKLLDTSGKKDKKIIDYSIRPDQTMSNG 548
Query: 472 HCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKN 299
H +F++P+I S LAKKRRNRFIIP + +ER EL+P IS+EIP GI+ +N
Sbjct: 549 HLNFIYPSIIQGNSYFLAKKRRNRFIIPLQYN--QEREKELIPCFGISIEIPKQGILRRN 606
Query: 298 SILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQ 119
SILAYFDDP+YR +SGI KY T+ ++SI +KEDLIEYRG +EF PKYQ KVDRFFFI +
Sbjct: 607 SILAYFDDPRYRRSNSGITKYGTVEVNSIIKKEDLIEYRGPKEFSPKYQTKVDRFFFILE 666
Query: 118 EVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
EVHIL SS IMVRNNSIIGV+T + LN +SRVGGLVRV
Sbjct: 667 EVHILPGSSLIMVRNNSIIGVDTQLALNTRSRVGGLVRV 705
[239][TOP]
>UniRef100_A9L986 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Lemna minor
RepID=RPOC2_LEMMI
Length = 1366
Score = 207 bits (528), Expect = 4e-52
Identities = 114/220 (51%), Positives = 146/220 (66%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQ++ HSL +R S+ V+ + R +
Sbjct: 489 SLHKDQDQINAHSLSLEERYISDLSVTKDLARHQLFSSDSSSKKRGGTFDYARPDGSISN 548
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
H + +P I + S+ LAK+RRN+FIIP + +ER+ EL+P +S+EIPI+GI+ +
Sbjct: 549 GHWNLQYPFILHENSDFLAKRRRNKFIIPLQYD--QERDKELIPHFGVSIEIPINGILRR 606
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYFDDP+YR SSGI KY + + SI +KEDLIEYRG +E PKYQ KVDRFFFIP
Sbjct: 607 NSILAYFDDPRYRRNSSGITKYGAVEVDSILKKEDLIEYRGTKELSPKYQTKVDRFFFIP 666
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVH+L SS IMVRNNSIIGV+TP+TLN +SRVGGLVRV
Sbjct: 667 EEVHVLPGSSLIMVRNNSIIGVDTPLTLNIRSRVGGLVRV 706
[240][TOP]
>UniRef100_A4QK95 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Barbarea verna
RepID=RPOC2_BARVE
Length = 1379
Score = 207 bits (528), Expect = 4e-52
Identities = 114/220 (51%), Positives = 152/220 (69%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQV-------------------------RLCP 476
S+ KDQDQM+ L +++ S+ V+N+QV L
Sbjct: 492 SIHKDQDQMNIPFLSVERKSISSLSVNNDQVSQNFLSSDFADKKKSGIPHYSELNGNLGT 551
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
H +F++ I + S+LLAK+RRNRF+IPF +SI+E+ E +P IS+EIPI+GI +
Sbjct: 552 SHYNFIYSAIFHENSDLLAKRRRNRFLIPF--QSIQEQEKEFIPHSGISIEIPINGIFRR 609
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSI A+FDDP+YR +SSGI KY T+ SI QKED+IEYRG+++FK KY++KVDRFFFIP
Sbjct: 610 NSIFAFFDDPRYRRKSSGILKYGTLKADSIIQKEDMIEYRGVQKFKTKYEMKVDRFFFIP 669
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL ESS+IMV+N SIIGV+T ITLN +SRVGGL+RV
Sbjct: 670 EEVHILPESSAIMVQNYSIIGVDTRITLNLRSRVGGLIRV 709
[241][TOP]
>UniRef100_A1XK74 RNA polymerase beta chain (Fragment) n=1 Tax=Smilax sp. Qiu 95117
RepID=A1XK74_9LILI
Length = 856
Score = 207 bits (527), Expect = 5e-52
Identities = 115/218 (52%), Positives = 147/218 (67%), Gaps = 25/218 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-----------------------LCPDH 470
S+ KDQDQM+ HS R S+ ++N +VR +
Sbjct: 37 SIHKDQDQMNVHSFSVEDRYISDPKMTNGRVRHKLLDTSSKKDKEIIDYSISDRIISNGQ 96
Query: 469 CHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHKNS 296
C+F++P+I S+LLAK+RRNRFIIP + +E+ EL+P IS+EIPI+GI+ +NS
Sbjct: 97 CNFIYPSIPKKNSDLLAKRRRNRFIIPLQYD--KEQEKELIPSFGISIEIPINGILRRNS 154
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQE 116
ILA+FDDP+YR SSGI KY T+ SI +K+DLIEYRG +EF KYQ+KVDRFFFIP+E
Sbjct: 155 ILAFFDDPRYRRSSSGITKYGTVEADSIIKKKDLIEYRGTKEFSLKYQMKVDRFFFIPEE 214
Query: 115 VHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
VHIL SSSI VRNNSII V+T + LNK+SRVGGLVRV
Sbjct: 215 VHILPGSSSIRVRNNSIIRVDTRLALNKRSRVGGLVRV 252
[242][TOP]
>UniRef100_A4QLS3 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Nasturtium
officinale RepID=RPOC2_NASOF
Length = 1379
Score = 207 bits (527), Expect = 5e-52
Identities = 114/220 (51%), Positives = 153/220 (69%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQV-------------------------RLCP 476
S+ KDQDQM+ L +++ S+F V+N+QV L
Sbjct: 492 SIHKDQDQMNIPFLSVERKSISSFSVNNDQVSKKFVSSDFDDKKKSEIPHYSDLNGNLGT 551
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGIIHK 302
H +F++ I + S+LLAK+RRNRFIIPF +SI+E+ + +P IS+EIPI+GI +
Sbjct: 552 SHYNFIYSAIFHENSDLLAKRRRNRFIIPF--QSIQEQEKKFIPHSGISIEIPINGIFRR 609
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSI A+FDDP+YR +SSGI KY T+ SI QKED+IEYRG+++FK KY++KVDRFFFIP
Sbjct: 610 NSIFAFFDDPRYRRKSSGILKYGTLKADSIIQKEDMIEYRGVQKFKTKYEMKVDRFFFIP 669
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL ESS+IMV+N SIIGV+T ITLN +S+VGGL+RV
Sbjct: 670 EEVHILPESSAIMVQNYSIIGVDTRITLNIRSQVGGLIRV 709
[243][TOP]
>UniRef100_B2LMI2 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Guizotia
abyssinica RepID=RPOC2_GUIAB
Length = 1381
Score = 207 bits (527), Expect = 5e-52
Identities = 117/222 (52%), Positives = 150/222 (67%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR---------------------------L 482
S+ KDQDQM+ +SL +R SN V+NNQVR
Sbjct: 494 SIHKDQDQMNAYSLSVKRRYISNPSVTNNQVRHKFFSSYFSGKNQKGDRIPDYSELNRMT 553
Query: 481 CPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGII 308
C C+ +P I S+LLAK+RRNR IIP SI+E N+L+P IS+EIP +GI+
Sbjct: 554 CTGRCNLRYPGILDGNSDLLAKRRRNRVIIPL--DSIQEGENQLIPSSGISIEIPRNGIL 611
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+NSILAYFDDP+Y +SSG+ KY+T ++SI +EDLIEYRG++ F PKYQ +V+ FFF
Sbjct: 612 RRNSILAYFDDPRYIRKSSGLTKYETRELNSIVNEEDLIEYRGVKVFWPKYQKEVNPFFF 671
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP E+HIL+ESSSIMVR+NSIIGV+T ITLN++SRVGGLVRV
Sbjct: 672 IPVEIHILAESSSIMVRHNSIIGVDTQITLNRRSRVGGLVRV 713
[244][TOP]
>UniRef100_Q56P11 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Lactuca sativa
RepID=RPOC2_LACSA
Length = 1381
Score = 207 bits (526), Expect = 6e-52
Identities = 117/222 (52%), Positives = 149/222 (67%), Gaps = 29/222 (13%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR---------------------------L 482
S+ KDQDQM+ +SL R +N V+NNQVR
Sbjct: 494 SIHKDQDQMNAYSLSVKPRYIANPSVTNNQVRHKFFSSYFSGKNQKGDRIPDCSELNRMT 553
Query: 481 CPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGII 308
C DH + +P I S+LLAK+RRNRFIIP SI+E N+L+P IS+EIP +GI+
Sbjct: 554 CTDHSNLRYPAILDGNSDLLAKRRRNRFIIPL--ESIQEGENQLIPSSGISMEIPRNGIL 611
Query: 307 HKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFF 128
+NSILAYFDDP+Y +SSG+ KY+T ++SI +E+LIEYRG++ F PKYQ +V+ FFF
Sbjct: 612 RRNSILAYFDDPRYIRKSSGLTKYETRELNSIVNEENLIEYRGVKVFWPKYQKEVNPFFF 671
Query: 127 IPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
IP EVHILSESSSIMVR+NSIIG +T IT N++SRVGGLVRV
Sbjct: 672 IPVEVHILSESSSIMVRHNSIIGADTQITFNRRSRVGGLVRV 713
[245][TOP]
>UniRef100_A9QBC9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Elaeis oleifera
RepID=A9QBC9_ELAOL
Length = 1375
Score = 206 bits (524), Expect = 1e-51
Identities = 119/218 (54%), Positives = 148/218 (67%), Gaps = 25/218 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-----------------------LCPDH 470
SL KDQDQM+ HS +R + ++N++VR + H
Sbjct: 493 SLHKDQDQMNVHSFSFEERYIFDPSMTNHRVRHKLLDTSGKKDREILDYSRPDRIISNGH 552
Query: 469 CHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKNS 296
+F++P+I + S+ LAKKRRNRFIIP + +ER+ ELMP IS+EIPI+GI+ +NS
Sbjct: 553 WNFIYPSILQENSDFLAKKRRNRFIIPLQYD--QERDKELMPCFGISIEIPINGILRRNS 610
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQE 116
ILAYFDDP+YR SSGI KY TI + SI +KEDLIEYR +EF PKYQ KVDRFFFI +E
Sbjct: 611 ILAYFDDPRYRRNSSGITKYGTIEVDSIIKKEDLIEYRRAKEFSPKYQ-KVDRFFFILEE 669
Query: 115 VHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
VHIL SS IMVRNNSIIGV+T + LN +SRVGGLVRV
Sbjct: 670 VHILPGSSFIMVRNNSIIGVDTQLALNTRSRVGGLVRV 707
[246][TOP]
>UniRef100_A1XKA2 RNA polymerase beta chain (Fragment) n=1 Tax=Anemopsis californica
RepID=A1XKA2_9MAGN
Length = 825
Score = 206 bits (524), Expect = 1e-51
Identities = 117/219 (53%), Positives = 145/219 (66%), Gaps = 26/219 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-------------------------LCP 476
SL KDQDQM+ HSL + + S+F V+N++VR +
Sbjct: 45 SLHKDQDQMNVHSLSLEQGSISDFSVTNDRVRHKLFRSDPSSKGGDGILDYSGPDQSISN 104
Query: 475 DHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISVEIPIDGIIHKNS 296
+F++ I + S+LLAKKRRNRFIIPF + E+ IS+EIPI GI+ +NS
Sbjct: 105 GRWNFIYTAILHENSDLLAKKRRNRFIIPFQYSQEGEKEPMPCSGISIEIPITGILRRNS 164
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIK-VDRFFFIPQ 119
ILAYFDDP+YR SSGI KY TI + SI +KEDLIEYRG +E + KYQ + +DRFFFIP+
Sbjct: 165 ILAYFDDPRYRRSSSGITKYGTIEVDSIVKKEDLIEYRGAKELRSKYQTESLDRFFFIPE 224
Query: 118 EVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
EVHIL SSSIMVRNNSIIGV+T I LN +SRVGGLVRV
Sbjct: 225 EVHILPGSSSIMVRNNSIIGVDTQIALNTRSRVGGLVRV 263
[247][TOP]
>UniRef100_A1XK75 RNA polymerase beta chain (Fragment) n=1 Tax=Chamaedorea tenella
RepID=A1XK75_9LILI
Length = 847
Score = 206 bits (524), Expect = 1e-51
Identities = 118/218 (54%), Positives = 148/218 (67%), Gaps = 25/218 (11%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVSNNQVR-----------------------LCPDH 470
SL KDQDQM+ S +R + ++N++VR + H
Sbjct: 35 SLHKDQDQMNVRSFSFEERYIFDLSMTNHRVRHKLLDTSGKKDREILDYSRPDRIISNGH 94
Query: 469 CHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMP--DISVEIPIDGIIHKNS 296
+F++P+I + S+ LAKKRRNRFIIP + +ER+ ELMP IS+EIPI+GI+ +NS
Sbjct: 95 WNFIYPSILQENSDFLAKKRRNRFIIPLQYD--QERDKELMPCFGISIEIPINGILRRNS 152
Query: 295 ILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIPQE 116
ILAYFDDP+YR SSGI KY TI + SI +KEDLIEYRG +EF PKYQ KVDRFFFI +E
Sbjct: 153 ILAYFDDPRYRRNSSGITKYGTIEVDSIIKKEDLIEYRGAKEFSPKYQ-KVDRFFFILEE 211
Query: 115 VHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
VHIL SS IMV+NNSIIGV+T + LN +SRVGGLVRV
Sbjct: 212 VHILPGSSFIMVQNNSIIGVDTQLALNTRSRVGGLVRV 249
[248][TOP]
>UniRef100_Q4FFY7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ranunculus macranthus
RepID=Q4FFY7_RANMC
Length = 1376
Score = 206 bits (523), Expect = 1e-51
Identities = 115/220 (52%), Positives = 148/220 (67%), Gaps = 27/220 (12%)
Frame = -2
Query: 580 SLLKDQDQMSTHSLPTAKRNTSNFLVS--NNQVR-------------------------L 482
SL KDQDQ++ HSL ++ SN +S N+QV L
Sbjct: 493 SLHKDQDQINIHSLSAKQKFISNLSLSMTNDQVIKKLFRSDSSVKKGGWVLDYSGPAEVL 552
Query: 481 CPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISVEIPIDGIIHK 302
C HC+ ++ I + S+LLAK+RRNRF IP +S +E+ + IS+EIPI+G+
Sbjct: 553 CNGHCNLIYSAILDENSDLLAKRRRNRFTIPL--QSNQEKEQKPRSGISIEIPINGLFRI 610
Query: 301 NSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQIKVDRFFFIP 122
NSILAYF+DP+YR +SSGI KY TI + SI +KEDLIEYR +EF+PKYQ+K+DRFFFIP
Sbjct: 611 NSILAYFEDPRYRRKSSGITKYGTIEVDSIVKKEDLIEYRRTKEFRPKYQMKIDRFFFIP 670
Query: 121 QEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
+EVHIL SSSIM+RNNSIIGV+T IT N +S+VGGLVRV
Sbjct: 671 EEVHILPGSSSIMIRNNSIIGVDTRITFNIRSQVGGLVRV 710
[249][TOP]
>UniRef100_A1XKC6 RNA polymerase beta chain (Fragment) n=1 Tax=Ceratophyllum
submersum RepID=A1XKC6_CERSB
Length = 806
Score = 206 bits (523), Expect = 1e-51
Identities = 108/169 (63%), Positives = 130/169 (76%)
Frame = -2
Query: 508 LVSNNQVRLCPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISVE 329
+VSN+Q F++P I + S+LLAK+RRNRF+IPF + +E+ IS E
Sbjct: 45 IVSNSQ---------FLYPAIPHENSDLLAKRRRNRFLIPFQYDQEQEKELMCPYGISTE 95
Query: 328 IPIDGIIHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQI 149
IPI+GI+ +NSILAYFDDP+YR SSGI KY TI + SI +KEDLIEYRG +EF+PKYQ
Sbjct: 96 IPINGILRRNSILAYFDDPRYRRSSSGITKYATIEVDSIVKKEDLIEYRGSKEFRPKYQT 155
Query: 148 KVDRFFFIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
KVDRFFFIP+EVHIL SSSIMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 156 KVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRITLNIRSRVGGLVRV 204
[250][TOP]
>UniRef100_A1XKC5 RNA polymerase beta chain (Fragment) n=1 Tax=Ceratophyllum demersum
RepID=A1XKC5_CERDE
Length = 791
Score = 206 bits (523), Expect = 1e-51
Identities = 108/169 (63%), Positives = 130/169 (76%)
Frame = -2
Query: 508 LVSNNQVRLCPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPDISVE 329
+VSN+Q F++P I + S+LLAK+RRNRF+IPF + +E+ IS E
Sbjct: 30 IVSNSQ---------FLYPAIPHENSDLLAKRRRNRFLIPFQYDQEQEKELMCPYGISTE 80
Query: 328 IPIDGIIHKNSILAYFDDPQYRTQSSGIAKYKTIGIHSIFQKEDLIEYRGIREFKPKYQI 149
IPI+GI+ +NSILAYFDDP+YR SSGI KY TI + SI +KEDLIEYRG +EF+PKYQ
Sbjct: 81 IPINGILRRNSILAYFDDPRYRRSSSGITKYATIEVDSIVKKEDLIEYRGSKEFRPKYQT 140
Query: 148 KVDRFFFIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRVGGLVRV 2
KVDRFFFIP+EVHIL SSSIMVRNNSIIGV+T ITLN +SRVGGLVRV
Sbjct: 141 KVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRITLNIRSRVGGLVRV 189