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[1][TOP]
>UniRef100_Q9BBQ4 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lotus japonicus
RepID=RPOA_LOTJA
Length = 333
Score = 174 bits (442), Expect = 2e-42
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN
Sbjct: 179 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
FENNEHKVTLPLFTCHDLLAK KLK
Sbjct: 239 FENNEHKVTLPLFTCHDLLAKTKLK 263
[2][TOP]
>UniRef100_UPI0001596B8A RNA polymerase alpha subunit n=1 Tax=Medicago truncatula
RepID=UPI0001596B8A
Length = 333
Score = 162 bits (409), Expect = 1e-38
Identities = 78/85 (91%), Positives = 80/85 (94%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEE LN
Sbjct: 179 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLN 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
FENN+HKVTLPLFT HD L K KL+
Sbjct: 239 FENNQHKVTLPLFTFHDRLLKDKLR 263
[3][TOP]
>UniRef100_C6TK62 Putative uncharacterized protein (Fragment) n=1 Tax=Glycine max
RepID=C6TK62_SOYBN
Length = 269
Score = 159 bits (403), Expect = 7e-38
Identities = 75/85 (88%), Positives = 80/85 (94%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN NHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEE+ N
Sbjct: 179 VRNVNHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEDNFN 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
ENN+HKVTLPLFT HD+LAK+KL+
Sbjct: 239 LENNQHKVTLPLFTFHDILAKEKLR 263
[4][TOP]
>UniRef100_Q2PMQ3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Glycine max
RepID=RPOA_SOYBN
Length = 333
Score = 159 bits (403), Expect = 7e-38
Identities = 75/85 (88%), Positives = 80/85 (94%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN NHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEE+ N
Sbjct: 179 VRNVNHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEDNFN 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
ENN+HKVTLPLFT HD+LAK+KL+
Sbjct: 239 LENNQHKVTLPLFTFHDILAKEKLR 263
[5][TOP]
>UniRef100_P13911 DNA-directed RNA polymerase subunit alpha n=1 Tax=Pisum sativum
RepID=RPOA_PEA
Length = 334
Score = 153 bits (387), Expect = 5e-36
Identities = 72/77 (93%), Positives = 75/77 (97%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSYVNGN+KQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEE LN
Sbjct: 178 VRNANHSIHSYVNGNQKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLN 237
Query: 75 FENNEHKVTLPLFTCHD 25
FENN+HK+TLPLFT HD
Sbjct: 238 FENNQHKMTLPLFTFHD 254
[6][TOP]
>UniRef100_B5LMQ5 RNA polymerase alpha subunit n=1 Tax=Cicer arietinum
RepID=B5LMQ5_CICAR
Length = 333
Score = 152 bits (383), Expect = 1e-35
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEE+KLN
Sbjct: 179 VRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALFEASRNLIDLFIPFLHAEEDKLN 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
ENN+ KVTLPLFT HD K KL+
Sbjct: 239 LENNQQKVTLPLFTFHDRFVKDKLR 263
[7][TOP]
>UniRef100_Q8MC99 DNA-directed RNA polymerase subunit alpha n=1 Tax=Vigna angularis
RepID=RPOA_PHAAN
Length = 333
Score = 149 bits (377), Expect = 7e-35
Identities = 71/85 (83%), Positives = 76/85 (89%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEAS+NLIDLFIPFLHAEEE N
Sbjct: 179 VRNVNYSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASQNLIDLFIPFLHAEEENFN 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
E +HKVTLPLFT HD+L K KL+
Sbjct: 239 LEKKKHKVTLPLFTFHDILVKDKLR 263
[8][TOP]
>UniRef100_A4GGD7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Phaseolus
vulgaris RepID=RPOA_PHAVU
Length = 333
Score = 147 bits (372), Expect = 3e-34
Identities = 69/85 (81%), Positives = 77/85 (90%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEAS+NLI+LFIPFLHAEE+ +
Sbjct: 179 VRNVNYSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASQNLIELFIPFLHAEEDNFH 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
E N+HKVTLPLFT HD+L K KL+
Sbjct: 239 LEKNQHKVTLPLFTFHDILVKDKLR 263
[9][TOP]
>UniRef100_Q49KW6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Eucalyptus
globulus subsp. globulus RepID=RPOA_EUCGG
Length = 337
Score = 147 bits (371), Expect = 4e-34
Identities = 71/81 (87%), Positives = 75/81 (92%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEE L+
Sbjct: 179 VRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENLH 238
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
ENN++KVTLP FT HD LAK
Sbjct: 239 LENNQYKVTLPFFTFHDRLAK 259
[10][TOP]
>UniRef100_B8R4C0 RNA polymerase alpha subunit n=1 Tax=Trifolium subterraneum
RepID=B8R4C0_TRISU
Length = 337
Score = 145 bits (365), Expect = 2e-33
Identities = 69/85 (81%), Positives = 76/85 (89%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V +AN+SIHSY+N NEKQEILFLEIWTNGSLTPKEALYEA+RNLIDLFIPFLHAEEE +
Sbjct: 181 VIHANYSIHSYLNANEKQEILFLEIWTNGSLTPKEALYEAARNLIDLFIPFLHAEEENFH 240
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
FENN+HKVTLPLF HD L K KL+
Sbjct: 241 FENNQHKVTLPLFAFHDRLVKDKLR 265
[11][TOP]
>UniRef100_Q4VZK3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cucumis sativus
RepID=RPOA_CUCSA
Length = 333
Score = 145 bits (365), Expect = 2e-33
Identities = 73/87 (83%), Positives = 78/87 (89%), Gaps = 2/87 (2%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN NHSIHSYVNGNEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEEK N
Sbjct: 179 VRNVNHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEEKEN 238
Query: 75 F--ENNEHKVTLPLFTCHDLLAKKKLK 1
F +NN+ KVTLPLFT H+ LAK + K
Sbjct: 239 FHLKNNKKKVTLPLFTFHEKLAKLRKK 265
[12][TOP]
>UniRef100_A4GYU3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Populus
trichocarpa RepID=RPOA_POPTR
Length = 339
Score = 144 bits (364), Expect = 2e-33
Identities = 68/81 (83%), Positives = 73/81 (90%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHS+HSY NGNEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEE +
Sbjct: 179 VRNANHSVHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENFH 238
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
E N+HK+TLPLF HD LAK
Sbjct: 239 LEKNQHKITLPLFAFHDRLAK 259
[13][TOP]
>UniRef100_Q14FC5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Populus alba
RepID=RPOA_POPAL
Length = 339
Score = 144 bits (364), Expect = 2e-33
Identities = 68/81 (83%), Positives = 73/81 (90%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHS+HSY NGNEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEE +
Sbjct: 179 VRNANHSVHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEESFH 238
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
E N+HK+TLPLF HD LAK
Sbjct: 239 LEKNQHKITLPLFAFHDRLAK 259
[14][TOP]
>UniRef100_C0LEA6 RpoA n=1 Tax=Jatropha curcas RepID=C0LEA6_9ROSI
Length = 339
Score = 143 bits (360), Expect = 7e-33
Identities = 69/81 (85%), Positives = 73/81 (90%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHS+HSY NGNEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEE L+
Sbjct: 179 VRNANHSVHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENLH 238
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
E N+HKVTLPLFT H L K
Sbjct: 239 LEINQHKVTLPLFTFHGRLTK 259
[15][TOP]
>UniRef100_B1A967 RNA polymerase alpha chain n=1 Tax=Carica papaya RepID=B1A967_CARPA
Length = 327
Score = 142 bits (357), Expect = 2e-32
Identities = 69/85 (81%), Positives = 74/85 (87%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+NANHSIHSY GNEKQEILFLEIWTNGSLTPKEAL+EASRNLI+LFIPFLHAEEEK
Sbjct: 179 VQNANHSIHSYGTGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHAEEEKFY 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
ENN+HKVTLP F HD LAK + K
Sbjct: 239 LENNQHKVTLPFFPFHDRLAKLRKK 263
[16][TOP]
>UniRef100_Q09FS9 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nandina domestica
RepID=RPOA_NANDO
Length = 338
Score = 141 bits (356), Expect = 2e-32
Identities = 69/85 (81%), Positives = 76/85 (89%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEE+ +
Sbjct: 179 VRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDII 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
E+N+++VTLP FT HD LAK K K
Sbjct: 239 LEDNQNRVTLPFFTFHDGLAKLKKK 263
[17][TOP]
>UniRef100_B5AH30 RNA polymerase alpha subunit n=1 Tax=Gonystylus bancanus
RepID=B5AH30_9ROSI
Length = 329
Score = 141 bits (355), Expect = 3e-32
Identities = 68/85 (80%), Positives = 73/85 (85%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN NHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEE +
Sbjct: 181 VRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENSH 240
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
EN++HKVTLP F HD L K + K
Sbjct: 241 LENSQHKVTLPFFPFHDKLTKLRKK 265
[18][TOP]
>UniRef100_A9QBM7 RNA polymerase alpha subunit (Fragment) n=1 Tax=Musa acuminata
RepID=A9QBM7_MUSAC
Length = 339
Score = 140 bits (352), Expect = 6e-32
Identities = 67/83 (80%), Positives = 73/83 (87%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEE +N
Sbjct: 179 VRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEDIN 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
F+ N+++ TLP+FT D L K
Sbjct: 239 FKENKNRFTLPIFTFQDRLTNLK 261
[19][TOP]
>UniRef100_Q09G14 DNA-directed RNA polymerase subunit alpha n=1 Tax=Platanus
occidentalis RepID=RPOA_PLAOC
Length = 337
Score = 140 bits (352), Expect = 6e-32
Identities = 67/81 (82%), Positives = 73/81 (90%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLHA+EE +
Sbjct: 179 VRNANHSIHSYANGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAQEENIL 238
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
E+N++ VTLP FT HD LAK
Sbjct: 239 LEDNQNGVTLPFFTFHDRLAK 259
[20][TOP]
>UniRef100_A7R909 Chromosome undetermined scaffold_3171, whole genome shotgun
sequence n=1 Tax=Vitis vinifera RepID=A7R909_VITVI
Length = 313
Score = 139 bits (350), Expect = 1e-31
Identities = 68/81 (83%), Positives = 72/81 (88%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNE+QEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEE L+
Sbjct: 173 VRNANHSIHSYGNGNERQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEETLH 232
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
E N+HK TLP T HD LAK
Sbjct: 233 LEYNQHKSTLPPLTFHDRLAK 253
[21][TOP]
>UniRef100_Q0ZIY7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Vitis vinifera
RepID=RPOA_VITVI
Length = 331
Score = 139 bits (350), Expect = 1e-31
Identities = 68/81 (83%), Positives = 72/81 (88%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNE+QEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEE L+
Sbjct: 179 VRNANHSIHSYGNGNERQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEETLH 238
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
E N+HK TLP T HD LAK
Sbjct: 239 LEYNQHKSTLPPLTFHDRLAK 259
[22][TOP]
>UniRef100_A6MM68 DNA-directed RNA polymerase subunit alpha n=1 Tax=Buxus microphylla
RepID=RPOA_BUXMI
Length = 337
Score = 139 bits (350), Expect = 1e-31
Identities = 67/83 (80%), Positives = 74/83 (89%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLHA EE
Sbjct: 179 VRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHANEENFI 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
++N++KV LPLFT HD LAK++
Sbjct: 239 LKDNQNKVALPLFTFHDRLAKQR 261
[23][TOP]
>UniRef100_Q4FGA0 RNA polymerase alpha chain (Fragment) n=1 Tax=Typha latifolia
RepID=Q4FGA0_TYPLA
Length = 339
Score = 138 bits (348), Expect = 2e-31
Identities = 67/83 (80%), Positives = 71/83 (85%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEE +N
Sbjct: 179 VRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEDIN 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ TLP T D L K
Sbjct: 239 FEENKNRFTLPFLTFQDRLTNLK 261
[24][TOP]
>UniRef100_A6MMN9 DNA-directed RNA polymerase subunit alpha n=1 Tax=Dioscorea
elephantipes RepID=RPOA_DIOEL
Length = 337
Score = 138 bits (348), Expect = 2e-31
Identities = 67/83 (80%), Positives = 72/83 (86%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +N
Sbjct: 179 VRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFVPFLHAEEEDIN 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N++K TLP T D L+ K
Sbjct: 239 FEENKNKFTLPPLTFQDRLSNLK 261
[25][TOP]
>UniRef100_B1NWI2 RNA polymerase alpha subunit n=1 Tax=Manihot esculenta
RepID=B1NWI2_MANES
Length = 343
Score = 138 bits (347), Expect = 2e-31
Identities = 68/83 (81%), Positives = 72/83 (86%), Gaps = 2/83 (2%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHS+HSY NGNEKQEILFLEIWTNGSLTPKEAL+EASRNLID FIPFLHAEEE L+
Sbjct: 181 VRNANHSVHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDFFIPFLHAEEENLH 240
Query: 75 --FENNEHKVTLPLFTCHDLLAK 13
E N+HKVTLPLF HD L K
Sbjct: 241 LEIEKNQHKVTLPLFCFHDKLTK 263
[26][TOP]
>UniRef100_A9QBD4 RNA polymerase alpha subunit (Fragment) n=1 Tax=Elaeis oleifera
RepID=A9QBD4_ELAOL
Length = 339
Score = 138 bits (347), Expect = 2e-31
Identities = 67/83 (80%), Positives = 72/83 (86%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEE +N
Sbjct: 179 VRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEDIN 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ LPLFT + L K
Sbjct: 239 FEENKNRFPLPLFTFQNRLTNLK 261
[27][TOP]
>UniRef100_Q2L938 DNA-directed RNA polymerase subunit alpha n=1 Tax=Gossypium
hirsutum RepID=RPOA_GOSHI
Length = 329
Score = 137 bits (345), Expect = 4e-31
Identities = 66/81 (81%), Positives = 69/81 (85%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIH Y N NEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLH EEE L+
Sbjct: 181 VRNANHSIHCYGNDNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHTEEENLH 240
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
ENN+H VTLP F HD L K
Sbjct: 241 LENNQHDVTLPFFPFHDRLVK 261
[28][TOP]
>UniRef100_A7QC74 Chromosome chr10 scaffold_76, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QC74_VITVI
Length = 310
Score = 137 bits (344), Expect = 5e-31
Identities = 67/81 (82%), Positives = 72/81 (88%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NG+E+QEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEE L+
Sbjct: 170 VRNANHSIHSYGNGSERQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEETLH 229
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
E N+HK TLP T HD LAK
Sbjct: 230 LEYNQHKGTLPPLTFHDRLAK 250
[29][TOP]
>UniRef100_Q09ME5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Citrus sinensis
RepID=RPOA_CITSI
Length = 328
Score = 137 bits (344), Expect = 5e-31
Identities = 67/81 (82%), Positives = 72/81 (88%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSI SY NGNEKQEILFLEIWTNGSLTPKEAL+EASR+LIDLFIPFL AE+E L
Sbjct: 180 VRNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRSLIDLFIPFLQAEDENLP 239
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
ENN++KVTLP FT HD LAK
Sbjct: 240 LENNQYKVTLPFFTFHDRLAK 260
[30][TOP]
>UniRef100_Q4FGA2 RNA polymerase alpha chain (Fragment) n=1 Tax=Nuphar advena
RepID=Q4FGA2_NUPAD
Length = 336
Score = 136 bits (343), Expect = 6e-31
Identities = 66/83 (79%), Positives = 71/83 (85%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEE+ +N
Sbjct: 179 VRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEQDIN 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
E+N + T+P FT HD L K
Sbjct: 239 IEDNLKRATVPFFTFHDGLDNMK 261
[31][TOP]
>UniRef100_P06505 DNA-directed RNA polymerase subunit alpha n=1 Tax=Spinacia oleracea
RepID=RPOA_SPIOL
Length = 335
Score = 136 bits (343), Expect = 6e-31
Identities = 67/81 (82%), Positives = 73/81 (90%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN NHSIHSY NGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDL IPFLHA EE +N
Sbjct: 179 VRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLLIPFLHA-EENVN 237
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
E+N+HKV+LPLFT H+ LA+
Sbjct: 238 LEDNQHKVSLPLFTFHNRLAE 258
[32][TOP]
>UniRef100_A6MMX6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Illicium
oligandrum RepID=RPOA_ILLOL
Length = 331
Score = 136 bits (343), Expect = 6e-31
Identities = 63/77 (81%), Positives = 70/77 (90%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNEKQEILFLEIWTNGS TPKEALYEASRNLIDLF+PFLHAEE+ +N
Sbjct: 179 VRNANHSIHSYGNGNEKQEILFLEIWTNGSFTPKEALYEASRNLIDLFLPFLHAEEQDIN 238
Query: 75 FENNEHKVTLPLFTCHD 25
E+N+++ T PLFT HD
Sbjct: 239 VEDNQNRATAPLFTFHD 255
[33][TOP]
>UniRef100_Q0G9T0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Daucus carota
RepID=RPOA_DAUCA
Length = 353
Score = 136 bits (343), Expect = 6e-31
Identities = 66/81 (81%), Positives = 70/81 (86%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGN+KQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLH EEE L+
Sbjct: 180 VRNANHSIHSYGNGNDKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHTEEENLH 239
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
NN+H V LP FT HD L K
Sbjct: 240 LANNQHMVPLPPFTFHDKLDK 260
[34][TOP]
>UniRef100_Q5QA74 DNA-directed RNA polymerase subunit alpha n=1 Tax=Acorus gramineus
RepID=RPOA_ACOGR
Length = 337
Score = 136 bits (343), Expect = 6e-31
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGN+KQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEE +N
Sbjct: 179 VRNANHSIHSYGNGNQKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEEDIN 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T+P FT D LA K
Sbjct: 239 FEENQNRFTVPPFTFPDRLANLK 261
[35][TOP]
>UniRef100_Q3V502 DNA-directed RNA polymerase subunit alpha n=2 Tax=Acorus
RepID=RPOA_ACOCL
Length = 337
Score = 136 bits (343), Expect = 6e-31
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGN+KQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEE +N
Sbjct: 179 VRNANHSIHSYGNGNQKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEEDIN 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T+P FT D LA K
Sbjct: 239 FEENQNRFTVPPFTFPDRLANLK 261
[36][TOP]
>UniRef100_C3UP04 RNA polymerase alpha subunit n=1 Tax=Megaleranthis saniculifolia
RepID=C3UP04_9MAGN
Length = 328
Score = 136 bits (342), Expect = 8e-31
Identities = 66/81 (81%), Positives = 71/81 (87%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNEKQEILFLEIWT+GSLTPKEALYEASRNLIDLFIPFLHAEE+
Sbjct: 179 VRNANHSIHSYGNGNEKQEILFLEIWTDGSLTPKEALYEASRNLIDLFIPFLHAEEQDTK 238
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
E+N+ +VTLP FT HD L K
Sbjct: 239 LEDNQSRVTLPFFTFHDGLDK 259
[37][TOP]
>UniRef100_Q4FG99 RNA polymerase alpha chain (Fragment) n=1 Tax=Yucca schidigera
RepID=Q4FG99_9ASPA
Length = 337
Score = 135 bits (341), Expect = 1e-30
Identities = 66/83 (79%), Positives = 72/83 (86%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEE ++
Sbjct: 177 VRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIH 236
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ TLPLFT + L K
Sbjct: 237 FEENKNRFTLPLFTFQNRLTNLK 259
[38][TOP]
>UniRef100_B0Z4Q8 RNA polymerase alpha subunit n=2 Tax=Oenothera RepID=B0Z4Q8_OENAR
Length = 366
Score = 135 bits (341), Expect = 1e-30
Identities = 66/81 (81%), Positives = 71/81 (87%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY N NEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLF+PFLHAEEE L+
Sbjct: 179 VRNANHSIHSYGNQNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFLPFLHAEEENLH 238
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
NN++ VT PLFT H LAK
Sbjct: 239 LGNNKYNVTFPLFTFHKKLAK 259
[39][TOP]
>UniRef100_A9L9C8 RNA polymerase alpha subunit n=1 Tax=Lemna minor RepID=A9L9C8_LEMMI
Length = 284
Score = 135 bits (340), Expect = 1e-30
Identities = 65/79 (82%), Positives = 71/79 (89%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSI+SY NGNEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEE+ +N
Sbjct: 179 VRNANHSIYSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEKDIN 238
Query: 75 FENNEHKVTLPLFTCHDLL 19
E N+ + TLPLFT HD L
Sbjct: 239 LEENKSRFTLPLFTFHDKL 257
[40][TOP]
>UniRef100_Q9XQN8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Sinapis alba
RepID=RPOA_SINAL
Length = 327
Score = 135 bits (339), Expect = 2e-30
Identities = 64/85 (75%), Positives = 72/85 (84%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+NANHSIHSY NGNEKQEILF+EIWTNGSLTPKEALYEASRNLI+LFIPFLH EEE
Sbjct: 179 VQNANHSIHSYGNGNEKQEILFIEIWTNGSLTPKEALYEASRNLINLFIPFLHVEEETFY 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
ENN+H+VTLP+F H+ L + K
Sbjct: 239 LENNQHQVTLPVFPFHNKLVNLRQK 263
[41][TOP]
>UniRef100_A4QLW5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nasturtium
officinale RepID=RPOA_NASOF
Length = 327
Score = 135 bits (339), Expect = 2e-30
Identities = 65/85 (76%), Positives = 72/85 (84%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+NANHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+EASRNLI+LFIPFLH EEE
Sbjct: 179 VQNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFY 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
ENN+H+VTLPLF H+ L + K
Sbjct: 239 LENNQHQVTLPLFPFHNRLVNLRKK 263
[42][TOP]
>UniRef100_A4QLM6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lobularia
maritima RepID=RPOA_LOBMA
Length = 327
Score = 135 bits (339), Expect = 2e-30
Identities = 65/85 (76%), Positives = 72/85 (84%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+NANHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+EASRNLI+LFIPFLH EEE
Sbjct: 179 VQNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFY 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
ENN+H+VTLPLF H+ L + K
Sbjct: 239 LENNQHQVTLPLFPFHNRLVNLRKK 263
[43][TOP]
>UniRef100_A4QLD8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lepidium
virginicum RepID=RPOA_LEPVR
Length = 327
Score = 135 bits (339), Expect = 2e-30
Identities = 65/85 (76%), Positives = 72/85 (84%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+NANHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+EASRNLI+LFIPFLH EEE
Sbjct: 179 VQNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFY 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
ENN+H+VTLPLF H+ L + K
Sbjct: 239 LENNQHQVTLPLFPFHNRLVNLRKK 263
[44][TOP]
>UniRef100_A4QKD7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Barbarea verna
RepID=RPOA_BARVE
Length = 327
Score = 135 bits (339), Expect = 2e-30
Identities = 65/85 (76%), Positives = 72/85 (84%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+NANHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+EASRNLI+LFIPFLH EEE
Sbjct: 179 VQNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFY 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
ENN+H+VTLPLF H+ L + K
Sbjct: 239 LENNQHQVTLPLFPFHNRLVNLRKK 263
[45][TOP]
>UniRef100_A4QJE7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Aethionema
cordifolium RepID=RPOA_AETCO
Length = 333
Score = 135 bits (339), Expect = 2e-30
Identities = 65/85 (76%), Positives = 72/85 (84%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+NANHSIHSY GNEKQEILFLEIWTNG+LTPKEAL+EASRNLI+LFIPFLH EEE
Sbjct: 179 VQNANHSIHSYGTGNEKQEILFLEIWTNGNLTPKEALHEASRNLINLFIPFLHVEEETFY 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
ENN+HKVTLPLF H+ L K + K
Sbjct: 239 LENNQHKVTLPLFPFHNRLVKLRKK 263
[46][TOP]
>UniRef100_Q09WY5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Morus indica
RepID=RPOA_MORIN
Length = 323
Score = 134 bits (338), Expect = 2e-30
Identities = 67/83 (80%), Positives = 71/83 (85%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSYVNGNE QEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPF HAEE +
Sbjct: 179 VRNANHSIHSYVNGNENQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFFHAEE---H 235
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
ENN+HK TLPLF H LAK +
Sbjct: 236 LENNQHKGTLPLFNFHGRLAKPR 258
[47][TOP]
>UniRef100_A6MMF4 DNA-directed RNA polymerase subunit alpha n=1 Tax=Chloranthus
spicatus RepID=RPOA_CHLSC
Length = 334
Score = 134 bits (338), Expect = 2e-30
Identities = 64/85 (75%), Positives = 72/85 (84%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEE +
Sbjct: 179 VRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEEGIR 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
E+N ++ +P FT HD LA ++
Sbjct: 239 LEDNPNRFNIPFFTFHDGLANTNIR 263
[48][TOP]
>UniRef100_B2XWQ5 RNA polymerase alpha subunit n=1 Tax=Fagopyrum esculentum subsp.
ancestrale RepID=B2XWQ5_FAGEA
Length = 337
Score = 134 bits (337), Expect = 3e-30
Identities = 64/79 (81%), Positives = 70/79 (88%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN NHSIHSY NGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFL+AE+E +
Sbjct: 179 VRNVNHSIHSYSNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLYAEKENFH 238
Query: 75 FENNEHKVTLPLFTCHDLL 19
E+N+ +VTLPLF HD L
Sbjct: 239 LEDNQDRVTLPLFLFHDRL 257
[49][TOP]
>UniRef100_Q68RX5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Panax ginseng
RepID=RPOA_PANGI
Length = 353
Score = 134 bits (336), Expect = 4e-30
Identities = 64/81 (79%), Positives = 70/81 (86%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL++ASRNLIDLFIPFLH EEE L+
Sbjct: 180 VRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHQASRNLIDLFIPFLHTEEENLH 239
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
+N+H V LP FT H+ L K
Sbjct: 240 LADNQHTVPLPPFTFHEKLTK 260
[50][TOP]
>UniRef100_A4QJW3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Olimarabidopsis
pumila RepID=RPOA_OLIPU
Length = 327
Score = 134 bits (336), Expect = 4e-30
Identities = 64/85 (75%), Positives = 72/85 (84%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+NANHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+EASRNLI+LFIPFLH EEE +
Sbjct: 179 VQNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETVY 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
ENN+H+VTLP F H+ L + K
Sbjct: 239 LENNQHQVTLPFFPFHNRLVNLRKK 263
[51][TOP]
>UniRef100_Q9MTJ3 DNA-directed RNA polymerase subunit alpha n=3 Tax=Oenothera
RepID=RPOA_OENEH
Length = 366
Score = 133 bits (335), Expect = 5e-30
Identities = 65/81 (80%), Positives = 70/81 (86%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY N NEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLF+PFLHAEEE L+
Sbjct: 179 VRNANHSIHSYGNQNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFLPFLHAEEENLH 238
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
N++ VT PLFT H LAK
Sbjct: 239 LGKNKYNVTFPLFTFHKKLAK 259
[52][TOP]
>UniRef100_Q33C00 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nicotiana
tomentosiformis RepID=RPOA_NICTO
Length = 337
Score = 133 bits (335), Expect = 5e-30
Identities = 65/81 (80%), Positives = 70/81 (86%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLH EE+ L
Sbjct: 179 VRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHIEEDNLY 238
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
++N+H V L FT HD LAK
Sbjct: 239 LQDNQHTVPLSPFTFHDKLAK 259
[53][TOP]
>UniRef100_Q3C1M3 DNA-directed RNA polymerase subunit alpha n=2 Tax=Nicotiana
RepID=RPOA_NICSY
Length = 337
Score = 133 bits (335), Expect = 5e-30
Identities = 65/81 (80%), Positives = 70/81 (86%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLH EE+ L
Sbjct: 179 VRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHMEEDNLY 238
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
++N+H V L FT HD LAK
Sbjct: 239 LQDNQHTVPLSPFTFHDKLAK 259
[54][TOP]
>UniRef100_A4QL51 DNA-directed RNA polymerase subunit alpha n=1 Tax=Draba nemorosa
RepID=RPOA_DRANE
Length = 327
Score = 133 bits (335), Expect = 5e-30
Identities = 64/85 (75%), Positives = 72/85 (84%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+NANHSIHSY NGN KQEILFLEIWTNGSLTPKEAL+EASRNLI+LFIPFLH EEE +
Sbjct: 179 VQNANHSIHSYGNGNGKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFH 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
ENN+H+VTLPLF H+ L + K
Sbjct: 239 LENNQHQVTLPLFPFHNRLVNLRKK 263
[55][TOP]
>UniRef100_A4QKM4 DNA-directed RNA polymerase subunit alpha n=1 Tax=Capsella
bursa-pastoris RepID=RPOA_CAPBU
Length = 327
Score = 133 bits (335), Expect = 5e-30
Identities = 64/85 (75%), Positives = 71/85 (83%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+NANHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+EASRNLI+LFIPFLH EEE
Sbjct: 179 VQNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFY 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
ENN+H+VTLP F H+ L + K
Sbjct: 239 LENNQHQVTLPFFPFHNRLVNLRKK 263
[56][TOP]
>UniRef100_Q8S8V9 DNA-directed RNA polymerase subunit alpha n=1 Tax=Atropa belladonna
RepID=RPOA_ATRBE
Length = 337
Score = 133 bits (335), Expect = 5e-30
Identities = 65/81 (80%), Positives = 70/81 (86%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLH EE+ L
Sbjct: 179 VRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHMEEDNLY 238
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
++N+H V L FT HD LAK
Sbjct: 239 LQDNQHTVPLSPFTFHDKLAK 259
[57][TOP]
>UniRef100_Q0G9I7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Liriodendron
tulipifera RepID=RPOA_LIRTU
Length = 337
Score = 132 bits (332), Expect = 1e-29
Identities = 64/80 (80%), Positives = 71/80 (88%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY N NEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEE+ +
Sbjct: 179 VRNANHSIHSYGNRNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDIV 238
Query: 75 FENNEHKVTLPLFTCHDLLA 16
E+N ++ T+PLFT HD LA
Sbjct: 239 LEDNPNRFTVPLFTFHDRLA 258
[58][TOP]
>UniRef100_A4QKW3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Crucihimalaya
wallichii RepID=RPOA_CRUWA
Length = 327
Score = 132 bits (332), Expect = 1e-29
Identities = 66/86 (76%), Positives = 72/86 (83%), Gaps = 3/86 (3%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+NANHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+EASRNLI+LFIPFLH EEE
Sbjct: 179 VQNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFY 238
Query: 75 FENNEHKVTLPLFTCHDL---LAKKK 7
ENN+H+VTLP F H+ L KKK
Sbjct: 239 LENNQHQVTLPFFPFHNRFFNLRKKK 264
[59][TOP]
>UniRef100_P56762 DNA-directed RNA polymerase subunit alpha n=1 Tax=Arabidopsis
thaliana RepID=RPOA_ARATH
Length = 329
Score = 132 bits (332), Expect = 1e-29
Identities = 66/89 (74%), Positives = 72/89 (80%), Gaps = 4/89 (4%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V NANHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL++ASRNLI+LFIPFLH EEE
Sbjct: 179 VENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFY 238
Query: 75 FENNEHKVTLPLFTCHDLLA----KKKLK 1
ENN+H+VTLP F H+ L KKK K
Sbjct: 239 LENNQHQVTLPFFPFHNRLVNLRKKKKTK 267
[60][TOP]
>UniRef100_Q06GM8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Piper cenocladum
RepID=RPOA_PIPCE
Length = 339
Score = 132 bits (331), Expect = 2e-29
Identities = 63/80 (78%), Positives = 70/80 (87%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHS+HSY NGNEKQEILF+EIWTNGSLTPKEALYEASRNLIDLFIPFLHAEE +++
Sbjct: 179 VRNANHSVHSYGNGNEKQEILFIEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEREIH 238
Query: 75 FENNEHKVTLPLFTCHDLLA 16
E+N + V L LFT HD A
Sbjct: 239 LEDNANGVPLALFTFHDEFA 258
[61][TOP]
>UniRef100_Q2MI69 DNA-directed RNA polymerase subunit alpha n=1 Tax=Solanum
lycopersicum RepID=RPOA_SOLLC
Length = 337
Score = 131 bits (330), Expect = 2e-29
Identities = 63/81 (77%), Positives = 70/81 (86%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNEKQEILF+EIWTNGSLTPKEAL++ASRNLIDLFIPFLH EE+ L
Sbjct: 179 VRNANHSIHSYGNGNEKQEILFIEIWTNGSLTPKEALHDASRNLIDLFIPFLHMEEDNLY 238
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
++N+H V L FT HD LAK
Sbjct: 239 LQDNQHTVPLSPFTFHDKLAK 259
[62][TOP]
>UniRef100_Q2MIF6 DNA-directed RNA polymerase subunit alpha n=2 Tax=Solanum
RepID=RPOA_SOLBU
Length = 337
Score = 131 bits (330), Expect = 2e-29
Identities = 63/81 (77%), Positives = 70/81 (86%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNEKQEILF+EIWTNGSLTPKEAL++ASRNLIDLFIPFLH EE+ L
Sbjct: 179 VRNANHSIHSYGNGNEKQEILFIEIWTNGSLTPKEALHDASRNLIDLFIPFLHMEEDNLY 238
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
++N+H V L FT HD LAK
Sbjct: 239 LQDNQHTVPLSPFTFHDKLAK 259
[63][TOP]
>UniRef100_A4QK50 DNA-directed RNA polymerase subunit alpha n=1 Tax=Arabis hirsuta
RepID=RPOA_ARAHI
Length = 337
Score = 131 bits (330), Expect = 2e-29
Identities = 64/85 (75%), Positives = 70/85 (82%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+NANHSIHSY NGN KQEILFLEIWTNGSLTPKEAL+EASRNLI+LFIPFLH EEE
Sbjct: 179 VQNANHSIHSYGNGNGKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFY 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
ENN+H VTLPLF H+ L + K
Sbjct: 239 LENNQHHVTLPLFPFHNRLVNLRKK 263
[64][TOP]
>UniRef100_A1XGS0 DNA-directed RNA polymerase subunit alpha n=2 Tax=Ranunculus
macranthus RepID=RPOA_RANMC
Length = 346
Score = 130 bits (328), Expect = 4e-29
Identities = 66/84 (78%), Positives = 71/84 (84%), Gaps = 1/84 (1%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNE QEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEE+ N
Sbjct: 179 VRNANHSIHSYGNGNENQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEQDQN 238
Query: 75 FENNE-HKVTLPLFTCHDLLAKKK 7
++N+ + VTLP FT HD K K
Sbjct: 239 LKDNQKNGVTLPFFTFHDGFDKLK 262
[65][TOP]
>UniRef100_A8SED5 DNA-directed RNA polymerase subunit alpha n=2 Tax=Ceratophyllum
demersum RepID=RPOA_CERDE
Length = 337
Score = 130 bits (328), Expect = 4e-29
Identities = 64/83 (77%), Positives = 73/83 (87%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NG EKQEILFLEIWTNGSLTPKEALYEASRNLI+LFIPFLHAEE+++
Sbjct: 179 VRNANHSIHSYGNGTEKQEILFLEIWTNGSLTPKEALYEASRNLINLFIPFLHAEEQEIL 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
E++E+ T+PLFT H+ LA K
Sbjct: 239 LEDSENISTVPLFTFHNELANLK 261
[66][TOP]
>UniRef100_A4QJN1 DNA-directed RNA polymerase subunit alpha n=1 Tax=Aethionema
grandiflorum RepID=RPOA_AETGR
Length = 333
Score = 130 bits (328), Expect = 4e-29
Identities = 64/85 (75%), Positives = 70/85 (82%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+NANHSIHSY GNE QEILFLEIWTNG+LTPKEAL+EASRNLI+LFIPFLH EEE
Sbjct: 179 VQNANHSIHSYGTGNENQEILFLEIWTNGNLTPKEALHEASRNLINLFIPFLHVEEETFY 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
ENNE KVTLPLF H+ L K + K
Sbjct: 239 LENNEDKVTLPLFPFHNRLVKLRKK 263
[67][TOP]
>UniRef100_Q3BAK5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Phalaenopsis
aphrodite subsp. formosana RepID=RPOA_PHAAO
Length = 337
Score = 130 bits (327), Expect = 5e-29
Identities = 62/77 (80%), Positives = 68/77 (88%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNEKQEILF+EIWTNGSLTPKEALYEASRNLIDL IPFLHAEEE +N
Sbjct: 179 VRNANHSIHSYGNGNEKQEILFIEIWTNGSLTPKEALYEASRNLIDLLIPFLHAEEEDMN 238
Query: 75 FENNEHKVTLPLFTCHD 25
F+ NE++ LP F+ D
Sbjct: 239 FKENENRWNLPPFSFQD 255
[68][TOP]
>UniRef100_A7Y3I1 DNA-directed RNA polymerase subunit alpha n=1 Tax=Ipomoea purpurea
RepID=RPOA_IPOPU
Length = 337
Score = 130 bits (327), Expect = 5e-29
Identities = 63/81 (77%), Positives = 69/81 (85%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLH EEE L+
Sbjct: 179 VRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHMEEENLH 238
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
E+ EH + L + HD +AK
Sbjct: 239 LEDGEHTIPLSPLSFHDKVAK 259
[69][TOP]
>UniRef100_Q06GW5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Drimys
granadensis RepID=RPOA_DRIGR
Length = 339
Score = 129 bits (325), Expect = 8e-29
Identities = 63/80 (78%), Positives = 69/80 (86%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+EAS NLIDLFIPFLH EEE +N
Sbjct: 181 VRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASHNLIDLFIPFLHGEEEDIN 240
Query: 75 FENNEHKVTLPLFTCHDLLA 16
E++ ++ TLP FT D LA
Sbjct: 241 LEDSLNRGTLPFFTFQDKLA 260
[70][TOP]
>UniRef100_A7KVR0 RNA polymerase alpha subunit (Fragment) n=1 Tax=Olea europaea
RepID=A7KVR0_OLEEU
Length = 280
Score = 129 bits (324), Expect = 1e-28
Identities = 64/81 (79%), Positives = 67/81 (82%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+EA RNLIDLFIPFLH EEE L
Sbjct: 153 VRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEACRNLIDLFIPFLHKEEENLP 212
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
E+N+H V L T HD L K
Sbjct: 213 LEDNQHTVPLSPLTFHDKLDK 233
[71][TOP]
>UniRef100_A9QAY1 RNA polymerase alpha subunit (Fragment) n=1 Tax=Anethum graveolens
RepID=A9QAY1_9APIA
Length = 338
Score = 129 bits (323), Expect = 1e-28
Identities = 64/83 (77%), Positives = 70/83 (84%), Gaps = 2/83 (2%)
Frame = -2
Query: 255 VRNANHSIHSYVNGN--EKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEK 82
+RNANHSIHSY NGN +KQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLH EEE
Sbjct: 180 IRNANHSIHSYGNGNGNDKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHTEEEN 239
Query: 81 LNFENNEHKVTLPLFTCHDLLAK 13
L+ +N+H V LP FT HD L K
Sbjct: 240 LHLADNQHMVPLPPFTFHDNLDK 262
[72][TOP]
>UniRef100_Q332U5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lactuca sativa
RepID=RPOA_LACSA
Length = 335
Score = 127 bits (320), Expect = 3e-28
Identities = 64/81 (79%), Positives = 68/81 (83%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGN+ EILFLEIWTNGSLTPKEALYEASRNLIDL IPFLH +EE LN
Sbjct: 179 VRNANHSIHSYENGNK--EILFLEIWTNGSLTPKEALYEASRNLIDLLIPFLHTKEENLN 236
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
E N+H V LP FT +D LAK
Sbjct: 237 LEGNQHMVPLPPFTFYDKLAK 257
[73][TOP]
>UniRef100_Q7YJU6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Calycanthus
floridus var. glaucus RepID=RPOA_CALFG
Length = 340
Score = 127 bits (318), Expect = 5e-28
Identities = 63/81 (77%), Positives = 71/81 (87%), Gaps = 2/81 (2%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEE--K 82
VRNANHSIHSY +GNEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEE+
Sbjct: 179 VRNANHSIHSYGSGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDIH 238
Query: 81 LNFENNEHKVTLPLFTCHDLL 19
LN E+N+++ T+ FT HD L
Sbjct: 239 LNLEDNQNRFTVSPFTLHDRL 259
[74][TOP]
>UniRef100_A0A367 DNA-directed RNA polymerase subunit alpha n=1 Tax=Coffea arabica
RepID=RPOA_COFAR
Length = 335
Score = 126 bits (317), Expect = 7e-28
Identities = 61/81 (75%), Positives = 68/81 (83%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
+RNAN+SIHSY NGNEKQEILFLEIWTNGSLTPKEAL++ASRNLIDLFIPFLH EE+ +
Sbjct: 179 IRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHQASRNLIDLFIPFLHMEEQNSH 238
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
ENN+H V L F HD L K
Sbjct: 239 LENNQHTVPLAPFFFHDKLDK 259
[75][TOP]
>UniRef100_Q4QZ04 DNA-directed RNA polymerase alpha chain n=1 Tax=Chrysanthemum x
morifolium RepID=Q4QZ04_CHRMO
Length = 335
Score = 125 bits (315), Expect = 1e-27
Identities = 62/81 (76%), Positives = 69/81 (85%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGN+ EILFLEIWTNGSLTPKEAL+EASRNLIDL IPFLH +EE LN
Sbjct: 179 VRNANHSIHSYENGNK--EILFLEIWTNGSLTPKEALHEASRNLIDLLIPFLHTKEENLN 236
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
E+N+H + LP FT +D LAK
Sbjct: 237 LEDNQHMIPLPPFTFYDKLAK 257
[76][TOP]
>UniRef100_B2LMM5 RNA polymerase alpha subunit n=1 Tax=Guizotia abyssinica
RepID=B2LMM5_GUIAB
Length = 335
Score = 125 bits (314), Expect = 1e-27
Identities = 63/81 (77%), Positives = 69/81 (85%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGN+ EILFLEIWTNGSLTPKEAL+EASRNLIDL IPFLH +EE LN
Sbjct: 179 VRNANHSIHSYENGNK--EILFLEIWTNGSLTPKEALHEASRNLIDLLIPFLHTKEENLN 236
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
E+N+H V LP FT +D LAK
Sbjct: 237 LEDNQHIVPLPPFTFYDKLAK 257
[77][TOP]
>UniRef100_A8W3F3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cuscuta exaltata
RepID=RPOA_CUSEX
Length = 335
Score = 125 bits (313), Expect = 2e-27
Identities = 62/81 (76%), Positives = 70/81 (86%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY GNEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLH EEE L+
Sbjct: 179 VRNANHSIHSY--GNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHMEEENLH 236
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
E+ +H ++L FT +D +AK
Sbjct: 237 LEDADHTISLSPFTVYDKVAK 257
[78][TOP]
>UniRef100_Q6EW20 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nymphaea alba
RepID=RPOA_NYMAL
Length = 341
Score = 124 bits (310), Expect = 4e-27
Identities = 61/79 (77%), Positives = 67/79 (84%), Gaps = 2/79 (2%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKL- 79
VRNANHSIHSY NGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEE+ +
Sbjct: 179 VRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEQDIN 238
Query: 78 -NFENNEHKVTLPLFTCHD 25
N E+N + ++P F D
Sbjct: 239 RNMEDNLKRASVPFFAFDD 257
[79][TOP]
>UniRef100_Q1KXS7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Helianthus annuus
RepID=RPOA_HELAN
Length = 335
Score = 123 bits (309), Expect = 6e-27
Identities = 62/81 (76%), Positives = 69/81 (85%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY NGN+ EILFLEIWTNGSLTPKEAL+EASRNLIDL IPFLH +EE L+
Sbjct: 179 VRNANHSIHSYENGNK--EILFLEIWTNGSLTPKEALHEASRNLIDLLIPFLHTKEENLS 236
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
E+N+H V LP FT +D LAK
Sbjct: 237 LEDNQHIVPLPPFTFYDKLAK 257
[80][TOP]
>UniRef100_A0ZZ67 DNA-directed RNA polymerase subunit alpha n=1 Tax=Gossypium
barbadense RepID=RPOA_GOSBA
Length = 330
Score = 123 bits (309), Expect = 6e-27
Identities = 60/73 (82%), Positives = 64/73 (87%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIH Y N NEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFI FLHA+EE L+
Sbjct: 181 VRNANHSIHCYGNDNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIHFLHAKEENLH 240
Query: 75 FENNEHKVTLPLF 37
ENN+H VTL F
Sbjct: 241 LENNQHDVTLHFF 253
[81][TOP]
>UniRef100_B8Y305 RNA polymerase alpha subunit n=1 Tax=Festuca arundinacea
RepID=B8Y305_FESAR
Length = 346
Score = 121 bits (304), Expect = 2e-26
Identities = 61/85 (71%), Positives = 67/85 (78%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 184 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 243
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
FE N+++ T PLFT L LK
Sbjct: 244 FEENKNRFTPPLFTFQKRLTNLNLK 268
[82][TOP]
>UniRef100_A8Y9B8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lolium perenne
RepID=RPOA_LOLPR
Length = 341
Score = 121 bits (304), Expect = 2e-26
Identities = 61/85 (71%), Positives = 67/85 (78%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
FE N+++ T PLFT L LK
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLNLK 263
[83][TOP]
>UniRef100_Q8SKY1 DNA-directed RNA polymerase subunit alpha n=2 Tax=Cuscuta reflexa
RepID=RPOA_CUSRE
Length = 335
Score = 121 bits (304), Expect = 2e-26
Identities = 61/81 (75%), Positives = 69/81 (85%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSI+SY GNEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLH EEE L+
Sbjct: 179 VRNANHSINSY--GNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHMEEENLH 236
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
E+ +H + L FT +D +AK
Sbjct: 237 LEDADHTIPLSPFTVYDKVAK 257
[84][TOP]
>UniRef100_C7SM26 RNA polymerase alpha subunit n=1 Tax=Joinvillea plicata
RepID=C7SM26_9POAL
Length = 339
Score = 121 bits (303), Expect = 3e-26
Identities = 61/83 (73%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI+S N NEK EILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEE N
Sbjct: 179 VRNVNYSIYSCGNENEKYEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEDTN 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ TLPL T L K
Sbjct: 239 FEENKNRFTLPLLTFQKRLTNLK 261
[85][TOP]
>UniRef100_B3TN81 RNA polymerase alpha subunit (Fragment) n=1 Tax=Brachypodium
distachyon RepID=B3TN81_BRADI
Length = 338
Score = 121 bits (303), Expect = 3e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTG 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L +K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNRK 261
[86][TOP]
>UniRef100_Q7H6H4 RNA polymerase alpha subunit n=1 Tax=Elymus virginicus
RepID=Q7H6H4_9POAL
Length = 339
Score = 120 bits (301), Expect = 5e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNPK 261
[87][TOP]
>UniRef100_Q539W2 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys lanuginosa
RepID=Q539W2_9POAL
Length = 339
Score = 120 bits (300), Expect = 6e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLK 261
[88][TOP]
>UniRef100_Q539W0 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys fragilis
subsp. secaliformis RepID=Q539W0_PSAFR
Length = 339
Score = 120 bits (300), Expect = 6e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLK 261
[89][TOP]
>UniRef100_Q539V6 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys caduca
RepID=Q539V6_9POAL
Length = 339
Score = 120 bits (300), Expect = 6e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLK 261
[90][TOP]
>UniRef100_Q539V4 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys caduca
RepID=Q539V4_9POAL
Length = 339
Score = 120 bits (300), Expect = 6e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLK 261
[91][TOP]
>UniRef100_Q3Y512 RNA polymerase subunit a n=1 Tax=Elymus dentatus RepID=Q3Y512_9POAL
Length = 339
Score = 120 bits (300), Expect = 6e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLK 261
[92][TOP]
>UniRef100_P93964 DNA-directed RNA polymerase subunit alpha n=1 Tax=Secale strictum
RepID=RPOA_SECST
Length = 339
Score = 120 bits (300), Expect = 6e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGAS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLK 261
[93][TOP]
>UniRef100_P93962 DNA-directed RNA polymerase subunit alpha n=1 Tax=Psathyrostachys
stoloniformis RepID=RPOA_PSAST
Length = 339
Score = 120 bits (300), Expect = 6e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLK 261
[94][TOP]
>UniRef100_P93960 DNA-directed RNA polymerase subunit alpha n=1 Tax=Psathyrostachys
rupestris RepID=RPOA_PSARU
Length = 339
Score = 120 bits (300), Expect = 6e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLK 261
[95][TOP]
>UniRef100_Q7H6F6 DNA-directed RNA polymerase subunit alpha n=9 Tax=Triticeae
RepID=RPOA_PSAJU
Length = 339
Score = 120 bits (300), Expect = 6e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLK 261
[96][TOP]
>UniRef100_P92418 DNA-directed RNA polymerase subunit alpha n=1 Tax=Psathyrostachys
fragilis RepID=RPOA_PSAFR
Length = 339
Score = 120 bits (300), Expect = 6e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLK 261
[97][TOP]
>UniRef100_Q06RA0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Jasminum
nudiflorum RepID=RPOA_JASNU
Length = 355
Score = 120 bits (300), Expect = 6e-26
Identities = 59/77 (76%), Positives = 62/77 (80%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNANHSIHSY +GNEK EILFLEIWTNGSLTPKEAL+EA RNLIDLFIPFLH EEE
Sbjct: 179 VRNANHSIHSYGSGNEKHEILFLEIWTNGSLTPKEALHEACRNLIDLFIPFLHKEEETSP 238
Query: 75 FENNEHKVTLPLFTCHD 25
E+N H V L T HD
Sbjct: 239 LEDNHHTVPLSPLTFHD 255
[98][TOP]
>UniRef100_Q7H6J2 DNA-directed RNA polymerase subunit alpha n=8 Tax=Hordeum
RepID=RPOA_HORBU
Length = 339
Score = 120 bits (300), Expect = 6e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLK 261
[99][TOP]
>UniRef100_P92389 DNA-directed RNA polymerase subunit alpha n=1 Tax=Heteranthelium
piliferum RepID=RPOA_HETPI
Length = 339
Score = 120 bits (300), Expect = 6e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLK 261
[100][TOP]
>UniRef100_P93956 DNA-directed RNA polymerase subunit alpha n=2 Tax=Triticeae
RepID=RPOA_FESSE
Length = 339
Score = 120 bits (300), Expect = 6e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLK 261
[101][TOP]
>UniRef100_Q8MAI8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Elymus hystrix
RepID=RPOA_ELYHY
Length = 339
Score = 120 bits (300), Expect = 6e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLK 261
[102][TOP]
>UniRef100_Q8MAI9 DNA-directed RNA polymerase subunit alpha n=1 Tax=Leymus
californicus RepID=RPOA_ELYCL
Length = 339
Score = 120 bits (300), Expect = 6e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLK 261
[103][TOP]
>UniRef100_Q7H6I5 DNA-directed RNA polymerase subunit alpha n=22 Tax=Triticeae
RepID=RPOA_ELYCA
Length = 339
Score = 120 bits (300), Expect = 6e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLK 261
[104][TOP]
>UniRef100_P92225 DNA-directed RNA polymerase subunit alpha n=1 Tax=Crithopsis
delileana RepID=RPOA_CRIDE
Length = 339
Score = 120 bits (300), Expect = 6e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGAS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLK 261
[105][TOP]
>UniRef100_P93993 DNA-directed RNA polymerase subunit alpha n=1 Tax=Australopyrum
velutinum RepID=RPOA_AUSVE
Length = 339
Score = 120 bits (300), Expect = 6e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLK 261
[106][TOP]
>UniRef100_A1EA40 DNA-directed RNA polymerase subunit alpha n=1 Tax=Agrostis
stolonifera RepID=RPOA_AGRST
Length = 339
Score = 120 bits (300), Expect = 6e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLK 261
[107][TOP]
>UniRef100_P92209 DNA-directed RNA polymerase subunit alpha n=3 Tax=Agropyron
RepID=RPOA_AGRCR
Length = 339
Score = 120 bits (300), Expect = 6e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLK 261
[108][TOP]
>UniRef100_Q8MAJ0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Aegilops
uniaristata RepID=RPOA_AEGUN
Length = 339
Score = 120 bits (300), Expect = 6e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGAS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLK 261
[109][TOP]
>UniRef100_P92429 DNA-directed RNA polymerase subunit alpha n=1 Tax=Aegilops tauschii
RepID=RPOA_AEGTA
Length = 339
Score = 120 bits (300), Expect = 6e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLK 261
[110][TOP]
>UniRef100_Q7GED9 DNA-directed RNA polymerase subunit alpha n=9 Tax=Triticeae
RepID=RPOA_AEGCM
Length = 339
Score = 120 bits (300), Expect = 6e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGAS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLK 261
[111][TOP]
>UniRef100_B0FIU6 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta japonica
RepID=B0FIU6_CUSJA
Length = 332
Score = 119 bits (299), Expect = 8e-26
Identities = 61/85 (71%), Positives = 69/85 (81%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+NANHSIHSY GNEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLH E+E L
Sbjct: 179 VQNANHSIHSY--GNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHMEKENLP 236
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
E+ +H + L FT + +AK K K
Sbjct: 237 LEDADHTIPLSPFTVYYKVAKNKKK 261
[112][TOP]
>UniRef100_P93968 DNA-directed RNA polymerase subunit alpha n=1 Tax=Festucopsis
festucoides RepID=RPOA_FESFE
Length = 339
Score = 119 bits (299), Expect = 8e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNLNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLK 261
[113][TOP]
>UniRef100_P93974 DNA-directed RNA polymerase subunit alpha n=2 Tax=Eremopyrum
RepID=RPOA_EREDI
Length = 339
Score = 119 bits (299), Expect = 8e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFKKRLTNLK 261
[114][TOP]
>UniRef100_Q49CA2 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cuscuta japonica
RepID=RPOA_CUSJA
Length = 332
Score = 119 bits (299), Expect = 8e-26
Identities = 61/85 (71%), Positives = 69/85 (81%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+NANHSIHSY GNEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLH E+E L
Sbjct: 179 VQNANHSIHSY--GNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHMEKENLP 236
Query: 75 FENNEHKVTLPLFTCHDLLAKKKLK 1
E+ +H + L FT + +AK K K
Sbjct: 237 LEDADHTIPLSPFTVYYKVAKNKKK 261
[115][TOP]
>UniRef100_P92220 DNA-directed RNA polymerase subunit alpha n=1 Tax=Bromus inermis
RepID=RPOA_BROIN
Length = 339
Score = 119 bits (299), Expect = 8e-26
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFKKRLTNLK 261
[116][TOP]
>UniRef100_Q5IBI2 RNA polymerase alpha subunit (Fragment) n=1 Tax=Plantago rugelii
RepID=Q5IBI2_9LAMI
Length = 308
Score = 119 bits (298), Expect = 1e-25
Identities = 60/79 (75%), Positives = 65/79 (82%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN NHSIHSY GNEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLH EEE L
Sbjct: 164 VRNVNHSIHSY--GNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLP 221
Query: 75 FENNEHKVTLPLFTCHDLL 19
ENN+ V+ F+ H+ L
Sbjct: 222 LENNQDTVSFSPFSFHEKL 240
[117][TOP]
>UniRef100_B0FIU7 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta
lupuliformis RepID=B0FIU7_9ASTE
Length = 335
Score = 118 bits (295), Expect = 2e-25
Identities = 59/81 (72%), Positives = 68/81 (83%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+NANHSIHSY GNEKQEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLH E+E L+
Sbjct: 179 VQNANHSIHSY--GNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHIEKENLH 236
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
E+ + + L FT +D +AK
Sbjct: 237 LEDADRTIPLSPFTVYDKVAK 257
[118][TOP]
>UniRef100_Q539W1 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys lanuginosa
RepID=Q539W1_9POAL
Length = 339
Score = 117 bits (294), Expect = 3e-25
Identities = 59/83 (71%), Positives = 65/83 (78%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PL T L K
Sbjct: 239 FEENKNRFTPPLLTFQKRLTNLK 261
[119][TOP]
>UniRef100_B2ZE98 RNA polymerase alpha subunit n=1 Tax=Phyllostachys propinqua
RepID=B2ZE98_9POAL
Length = 339
Score = 117 bits (294), Expect = 3e-25
Identities = 59/83 (71%), Positives = 65/83 (78%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PL T L K
Sbjct: 239 FEENKNRFTPPLLTFQKRLTNLK 261
[120][TOP]
>UniRef100_P60314 DNA-directed RNA polymerase subunit alpha n=1 Tax=Amborella
trichopoda RepID=RPOA_AMBTC
Length = 334
Score = 117 bits (294), Expect = 3e-25
Identities = 58/80 (72%), Positives = 66/80 (82%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNAN+SI Y N NEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEE L+
Sbjct: 177 VRNANYSIQCYGNENEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEERDLH 236
Query: 75 FENNEHKVTLPLFTCHDLLA 16
+++++ T P F H+ LA
Sbjct: 237 LDDDQNIFTAPFFPFHEGLA 256
[121][TOP]
>UniRef100_P92439 DNA-directed RNA polymerase subunit alpha n=3 Tax=Thinopyrum
RepID=RPOA_THIBE
Length = 339
Score = 117 bits (293), Expect = 4e-25
Identities = 59/83 (71%), Positives = 65/83 (78%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T P FT L K
Sbjct: 239 FEENKNRFTPPPFTFQKRLTNLK 261
[122][TOP]
>UniRef100_Q8MAI6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lophopyrum
elongatum RepID=RPOA_LOPEL
Length = 339
Score = 117 bits (292), Expect = 5e-25
Identities = 59/83 (71%), Positives = 65/83 (78%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T P FT L K
Sbjct: 239 FEENKNRFTPPPFTFKKRLTNLK 261
[123][TOP]
>UniRef100_Q3Y511 RNA polymerase subunit a n=1 Tax=Elymus mutabilis
RepID=Q3Y511_9POAL
Length = 339
Score = 116 bits (291), Expect = 7e-25
Identities = 59/83 (71%), Positives = 65/83 (78%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NG EK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFSCGNGIEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PLFT L K
Sbjct: 239 FEENKNRFTPPLFTFQKRLTNLK 261
[124][TOP]
>UniRef100_P09562 DNA-directed RNA polymerase subunit alpha n=1 Tax=Zea mays
RepID=RPOA_MAIZE
Length = 339
Score = 116 bits (290), Expect = 9e-25
Identities = 56/74 (75%), Positives = 63/74 (85%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLH EEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTS 238
Query: 75 FENNEHKVTLPLFT 34
FE N++++T PL T
Sbjct: 239 FEENKNRLTPPLLT 252
[125][TOP]
>UniRef100_C8XU47 RNA polymerase alpha subunit n=1 Tax=Coix lacryma-jobi
RepID=C8XU47_COILA
Length = 339
Score = 115 bits (288), Expect = 2e-24
Identities = 55/74 (74%), Positives = 63/74 (85%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PF+H EEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFIHTEEEGTS 238
Query: 75 FENNEHKVTLPLFT 34
FE N++++T PL T
Sbjct: 239 FEENKNRLTPPLLT 252
[126][TOP]
>UniRef100_C6GJ86 RpoA n=2 Tax=Bambuseae RepID=C6GJ86_BAMOL
Length = 339
Score = 115 bits (288), Expect = 2e-24
Identities = 58/83 (69%), Positives = 64/83 (77%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLHAEEE +
Sbjct: 179 VRNVNYSIFYCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTS 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
FE N+++ T PL T L K
Sbjct: 239 FEENKNRFTPPLLTFQKKLTNLK 261
[127][TOP]
>UniRef100_Q6L370 DNA-directed RNA polymerase subunit alpha n=2 Tax=Saccharum
RepID=RPOA_SACHY
Length = 339
Score = 115 bits (288), Expect = 2e-24
Identities = 55/74 (74%), Positives = 63/74 (85%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PF+H EEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFIHTEEEGTS 238
Query: 75 FENNEHKVTLPLFT 34
FE N++++T PL T
Sbjct: 239 FEENKNRLTPPLLT 252
[128][TOP]
>UniRef100_A1E9V6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Sorghum bicolor
RepID=RPOA_SORBI
Length = 339
Score = 113 bits (283), Expect = 6e-24
Identities = 54/74 (72%), Positives = 63/74 (85%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGNEK EILFLEIWTNGSLTPKEALYEASRNLIDLF+PF+H EEE +
Sbjct: 179 VRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFIHTEEEGTS 238
Query: 75 FENNEHKVTLPLFT 34
FE +++++T PL T
Sbjct: 239 FEESKNRLTPPLLT 252
[129][TOP]
>UniRef100_A9QC95 RNA polymerase alpha subunit (Fragment) n=1 Tax=Trachelium
caeruleum RepID=A9QC95_TRACE
Length = 337
Score = 113 bits (282), Expect = 8e-24
Identities = 52/66 (78%), Positives = 59/66 (89%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN NHSI+SY GN+K EILFLEIWTNGSLTPKEAL+EA+RNLIDLFIPFLH EEE L+
Sbjct: 179 VRNVNHSIYSYGTGNDKHEILFLEIWTNGSLTPKEALHEAARNLIDLFIPFLHTEEENLD 238
Query: 75 FENNEH 58
E+N+H
Sbjct: 239 LEDNQH 244
[130][TOP]
>UniRef100_Q2LIP2 RNA polymerase subunit (Fragment) n=1 Tax=Oryza rhizomatis
RepID=Q2LIP2_9ORYZ
Length = 317
Score = 111 bits (277), Expect = 3e-23
Identities = 55/83 (66%), Positives = 62/83 (74%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGN K EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLH EEE
Sbjct: 159 VRNVNYSIFSCGNGNAKYEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTR 218
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
F+ N+++ T PL + L K
Sbjct: 219 FQENQNRFTSPLLSFQKRLTNLK 241
[131][TOP]
>UniRef100_Q2LIP1 RNA polymerase subunit (Fragment) n=1 Tax=Oryza punctata
RepID=Q2LIP1_ORYPU
Length = 317
Score = 110 bits (276), Expect = 4e-23
Identities = 55/83 (66%), Positives = 62/83 (74%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGN K EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLH EEE
Sbjct: 159 VRNVNYSIFSCGNGNAKYEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTR 218
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
F+ N+++ T PL + L K
Sbjct: 219 FQENKNRFTSPLLSFQKRLTNLK 241
[132][TOP]
>UniRef100_Q2LIP0 RNA polymerase subunit (Fragment) n=2 Tax=Oryza RepID=Q2LIP0_9ORYZ
Length = 317
Score = 110 bits (276), Expect = 4e-23
Identities = 55/83 (66%), Positives = 62/83 (74%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGN K EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLH EEE
Sbjct: 159 VRNVNYSIFSCGNGNAKYEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTR 218
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
F+ N+++ T PL + L K
Sbjct: 219 FQENKNRFTSPLLSFQKRLTNLK 241
[133][TOP]
>UniRef100_Q2LIN9 RNA polymerase subunit (Fragment) n=1 Tax=Oryza granulata
RepID=Q2LIN9_9ORYZ
Length = 317
Score = 110 bits (276), Expect = 4e-23
Identities = 55/83 (66%), Positives = 62/83 (74%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI S NGN K EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLH EEE
Sbjct: 159 VRNVNYSIFSCGNGNAKYEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTR 218
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
F+ N+++ T PL + L K
Sbjct: 219 FQENKNRFTSPLLSFQKRLTNLK 241
[134][TOP]
>UniRef100_B0FIU3 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta nitida
RepID=B0FIU3_9ASTE
Length = 339
Score = 110 bits (274), Expect = 6e-23
Identities = 54/81 (66%), Positives = 66/81 (81%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V N NHSI+SY GNEK+EILFLEIWTNGSLTPKEAL+EA++NL+DLFIPFL EEE LN
Sbjct: 179 VLNVNHSIYSY--GNEKKEILFLEIWTNGSLTPKEALHEAAQNLMDLFIPFLQMEEENLN 236
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
E+ EH++ FT +D ++K
Sbjct: 237 LEDAEHQIPFSPFTFYDKVSK 257
[135][TOP]
>UniRef100_UPI0000DD8D71 Os01g0789400 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000DD8D71
Length = 425
Score = 109 bits (273), Expect = 8e-23
Identities = 54/83 (65%), Positives = 62/83 (74%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI + NGN K EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLH EEE
Sbjct: 267 VRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTR 326
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
F+ N+++ T PL + L K
Sbjct: 327 FQENKNRFTSPLLSFQKRLTNLK 349
[136][TOP]
>UniRef100_Q8S1Q6 Chloroplast RNA polymerase alpha chain n=1 Tax=Oryza sativa
Japonica Group RepID=Q8S1Q6_ORYSJ
Length = 337
Score = 109 bits (273), Expect = 8e-23
Identities = 54/83 (65%), Positives = 62/83 (74%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI + NGN K EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLH EEE
Sbjct: 179 VRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTR 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
F+ N+++ T PL + L K
Sbjct: 239 FQENKNRFTSPLLSFQKRLTNLK 261
[137][TOP]
>UniRef100_Q7DNA8 OSJNBa0061C08.8 protein n=2 Tax=Oryza sativa RepID=Q7DNA8_ORYSJ
Length = 446
Score = 109 bits (273), Expect = 8e-23
Identities = 54/83 (65%), Positives = 62/83 (74%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI + NGN K EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLH EEE
Sbjct: 288 VRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTR 347
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
F+ N+++ T PL + L K
Sbjct: 348 FQENKNRFTSPLLSFQKRLTNLK 370
[138][TOP]
>UniRef100_Q2LIP7 RNA polymerase subunit (Fragment) n=1 Tax=Oryza sativa
RepID=Q2LIP7_ORYSA
Length = 317
Score = 109 bits (273), Expect = 8e-23
Identities = 54/83 (65%), Positives = 62/83 (74%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI + NGN K EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLH EEE
Sbjct: 159 VRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTR 218
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
F+ N+++ T PL + L K
Sbjct: 219 FQENKNRFTSPLLSFQKRLTNLK 241
[139][TOP]
>UniRef100_P0C500 DNA-directed RNA polymerase subunit alpha n=7 Tax=Oryza
RepID=RPOA_ORYSJ
Length = 337
Score = 109 bits (273), Expect = 8e-23
Identities = 54/83 (65%), Positives = 62/83 (74%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI + NGN K EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLH EEE
Sbjct: 179 VRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTR 238
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
F+ N+++ T PL + L K
Sbjct: 239 FQENKNRFTSPLLSFQKRLTNLK 261
[140][TOP]
>UniRef100_A9QC21 RNA polymerase alpha subunit (Fragment) n=1 Tax=Scaevola aemula
RepID=A9QC21_9ASTR
Length = 332
Score = 109 bits (272), Expect = 1e-22
Identities = 57/83 (68%), Positives = 66/83 (79%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+ N+SIHS +GN KQEILFLEIWTNGSLTPKEAL+EA RNLIDLFIPFLH EE N
Sbjct: 179 VRHMNYSIHS--SGNGKQEILFLEIWTNGSLTPKEALHEACRNLIDLFIPFLHKEEG--N 234
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
ENN+ ++ P FT +D L+K K
Sbjct: 235 LENNQDRIPFPSFTFYDKLSKLK 257
[141][TOP]
>UniRef100_Q7G6A7 DNA-directed RNA polymerase alpha chain, putative, expressed n=2
Tax=Oryza sativa RepID=Q7G6A7_ORYSJ
Length = 446
Score = 108 bits (270), Expect = 2e-22
Identities = 53/83 (63%), Positives = 62/83 (74%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI + NGN + EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLH EEE
Sbjct: 288 VRNVNYSIFACGNGNARYEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTR 347
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
F+ N+++ T PL + L K
Sbjct: 348 FQENKNRFTSPLLSFQKRLTNLK 370
[142][TOP]
>UniRef100_A6H5L3 DNA-directed RNA polymerase subunit alpha n=2 Tax=Cycas
RepID=RPOA_CYCTA
Length = 340
Score = 108 bits (270), Expect = 2e-22
Identities = 52/80 (65%), Positives = 65/80 (81%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNAN+SIHSY NGN+ QEILFLEIWTNGSL P+EALY ASRNLIDLFIPFL AEE+ ++
Sbjct: 179 VRNANYSIHSYGNGNDIQEILFLEIWTNGSLAPREALYRASRNLIDLFIPFLRAEEQNID 238
Query: 75 FENNEHKVTLPLFTCHDLLA 16
+N++ +P F+ ++ A
Sbjct: 239 GMDNQNGSNMPSFSFSNISA 258
[143][TOP]
>UniRef100_Q2LIP5 RNA polymerase subunit (Fragment) n=1 Tax=Oryza glumipatula
RepID=Q2LIP5_9ORYZ
Length = 317
Score = 107 bits (267), Expect = 4e-22
Identities = 53/83 (63%), Positives = 61/83 (73%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI + NGN K EILFLEIWTNGSLTP EALYEASRNLIDLF+PFLH EEE
Sbjct: 159 VRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPMEALYEASRNLIDLFLPFLHTEEEGTR 218
Query: 75 FENNEHKVTLPLFTCHDLLAKKK 7
F+ N+++ T PL + L K
Sbjct: 219 FQENKNRFTSPLLSFQKRLTNLK 241
[144][TOP]
>UniRef100_C3W0T7 RNA polymerase alpha subunit n=1 Tax=Cedrus deodara
RepID=C3W0T7_CEDDE
Length = 335
Score = 107 bits (266), Expect = 5e-22
Identities = 51/79 (64%), Positives = 62/79 (78%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+AN+SIHSY +GNE +E+LFLEIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++
Sbjct: 179 VRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNID 238
Query: 75 FENNEHKVTLPLFTCHDLL 19
NN +P F +L
Sbjct: 239 GMNNRKGSNMPPFPLSHVL 257
[145][TOP]
>UniRef100_B7T379 RNA polymerase alpha subunit n=1 Tax=Geranium carolinianum
RepID=B7T379_9ROSI
Length = 329
Score = 107 bits (266), Expect = 5e-22
Identities = 55/77 (71%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+N NHSIHSY NG+ E+LFLEIWTNGSLTPKEAL EASR LI+LFIPFLHAEEE +
Sbjct: 182 VKNVNHSIHSYENGSH--EMLFLEIWTNGSLTPKEALREASRKLINLFIPFLHAEEENFH 239
Query: 75 FEN--NEHKVTLPLFTC 31
FEN NEH LP+ C
Sbjct: 240 FENNQNEHTDELPIDLC 256
[146][TOP]
>UniRef100_Q5EG69 RNA polymerase alpha subunit n=1 Tax=Sphagnum fimbriatum
RepID=Q5EG69_9BRYO
Length = 338
Score = 106 bits (264), Expect = 9e-22
Identities = 48/65 (73%), Positives = 59/65 (90%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
+RNAN+S+HS+ N NE QEILF+EIWTNGS+TPKEALYEASR+LIDLFIPFLHAE+E++
Sbjct: 182 IRNANYSVHSFENKNETQEILFIEIWTNGSVTPKEALYEASRSLIDLFIPFLHAEKEEVM 241
Query: 75 FENNE 61
+ NE
Sbjct: 242 HDKNE 246
[147][TOP]
>UniRef100_C3W2E4 RNA polymerase alpha subunit n=1 Tax=Pinus peuce RepID=C3W2E4_PINPE
Length = 335
Score = 105 bits (263), Expect = 1e-21
Identities = 49/65 (75%), Positives = 58/65 (89%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+AN+SIHSY +GNE QE+LFLEIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++
Sbjct: 179 VRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNID 238
Query: 75 FENNE 61
NN+
Sbjct: 239 GMNNK 243
[148][TOP]
>UniRef100_C3W219 RNA polymerase alpha subunit n=1 Tax=Pinus monticola
RepID=C3W219_PINMO
Length = 335
Score = 105 bits (263), Expect = 1e-21
Identities = 49/65 (75%), Positives = 58/65 (89%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+AN+SIHSY +GNE QE+LFLEIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++
Sbjct: 179 VRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNID 238
Query: 75 FENNE 61
NN+
Sbjct: 239 GMNNK 243
[149][TOP]
>UniRef100_C3VYH6 RNA polymerase alpha subunit n=4 Tax=Strobus RepID=C3VYH6_PINST
Length = 335
Score = 105 bits (263), Expect = 1e-21
Identities = 49/65 (75%), Positives = 58/65 (89%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+AN+SIHSY +GNE QE+LFLEIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++
Sbjct: 179 VRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNID 238
Query: 75 FENNE 61
NN+
Sbjct: 239 GMNNK 243
[150][TOP]
>UniRef100_C3VYB7 RNA polymerase alpha subunit n=1 Tax=Pinus squamata
RepID=C3VYB7_9CONI
Length = 335
Score = 105 bits (263), Expect = 1e-21
Identities = 49/65 (75%), Positives = 58/65 (89%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+AN+SIHSY +GNE QE+LFLEIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++
Sbjct: 179 VRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNID 238
Query: 75 FENNE 61
NN+
Sbjct: 239 GMNNK 243
[151][TOP]
>UniRef100_C3TSB3 RNA polymerase alpha subunit n=1 Tax=Pinus krempfii
RepID=C3TSB3_PINKR
Length = 335
Score = 105 bits (263), Expect = 1e-21
Identities = 49/65 (75%), Positives = 58/65 (89%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+AN+SIHSY +GNE QE+LFLEIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++
Sbjct: 179 VRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNID 238
Query: 75 FENNE 61
NN+
Sbjct: 239 GMNNK 243
[152][TOP]
>UniRef100_Q85X01 DNA-directed RNA polymerase subunit alpha n=5 Tax=Strobus
RepID=RPOA_PINKO
Length = 335
Score = 105 bits (263), Expect = 1e-21
Identities = 49/65 (75%), Positives = 58/65 (89%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+AN+SIHSY +GNE QE+LFLEIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++
Sbjct: 179 VRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNID 238
Query: 75 FENNE 61
NN+
Sbjct: 239 GMNNK 243
[153][TOP]
>UniRef100_B0FIU4 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta epilinum
RepID=B0FIU4_9ASTE
Length = 330
Score = 105 bits (261), Expect = 2e-21
Identities = 56/87 (64%), Positives = 64/87 (73%), Gaps = 4/87 (4%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+NANHSIHSY GNEKQEILFLEIWTNGSLTPKEAL+EA+R LID FIPF H EEE L
Sbjct: 179 VQNANHSIHSY--GNEKQEILFLEIWTNGSLTPKEALHEAARILIDFFIPFFHMEEENLY 236
Query: 75 FENNEHKVTLPLFTCHD----LLAKKK 7
+ EH + L ++ L+ KKK
Sbjct: 237 LADAEHTIPLSSLIFYNKVTKLIKKKK 263
[154][TOP]
>UniRef100_C3W1N1 RNA polymerase alpha subunit n=1 Tax=Larix occidentalis
RepID=C3W1N1_LAROX
Length = 335
Score = 104 bits (260), Expect = 3e-21
Identities = 50/79 (63%), Positives = 61/79 (77%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+AN+SIHSY +GNE +E+LFLEIWTNG LTP+EALYEASRNLIDL IPFLH EE+ ++
Sbjct: 179 VRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNLIDLLIPFLHGEEQNID 238
Query: 75 FENNEHKVTLPLFTCHDLL 19
NN +P F +L
Sbjct: 239 GMNNRKGSNMPPFPLSHVL 257
[155][TOP]
>UniRef100_C3W150 RNA polymerase alpha subunit n=1 Tax=Pinus leiophylla var.
chihuahuana RepID=C3W150_PINLE
Length = 335
Score = 104 bits (260), Expect = 3e-21
Identities = 51/79 (64%), Positives = 62/79 (78%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+AN+SIHSY +GNE +E+LFLEIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++
Sbjct: 179 VRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNID 238
Query: 75 FENNEHKVTLPLFTCHDLL 19
NN+ + F LL
Sbjct: 239 GMNNKKGSNMLPFPLSHLL 257
[156][TOP]
>UniRef100_C3W0G5 RNA polymerase alpha subunit n=1 Tax=Pinus banksiana
RepID=C3W0G5_PINBN
Length = 335
Score = 104 bits (260), Expect = 3e-21
Identities = 51/79 (64%), Positives = 62/79 (78%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+AN+SIHSY +GNE +E+LFLEIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++
Sbjct: 179 VRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNID 238
Query: 75 FENNEHKVTLPLFTCHDLL 19
NN+ + F LL
Sbjct: 239 GMNNKKGSNMLPFPLSHLL 257
[157][TOP]
>UniRef100_C3VZ24 RNA polymerase alpha subunit n=2 Tax=Pinus torreyana
RepID=C3VZ24_PINTO
Length = 335
Score = 104 bits (260), Expect = 3e-21
Identities = 51/79 (64%), Positives = 62/79 (78%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+AN+SIHSY +GNE +E+LFLEIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++
Sbjct: 179 VRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNID 238
Query: 75 FENNEHKVTLPLFTCHDLL 19
NN+ + F LL
Sbjct: 239 GMNNKKGSNMLPFPLSHLL 257
[158][TOP]
>UniRef100_C3VYP0 RNA polymerase alpha subunit n=1 Tax=Pinus taeda RepID=C3VYP0_PINTA
Length = 335
Score = 104 bits (260), Expect = 3e-21
Identities = 51/79 (64%), Positives = 62/79 (78%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+AN+SIHSY +GNE +E+LFLEIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++
Sbjct: 179 VRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNID 238
Query: 75 FENNEHKVTLPLFTCHDLL 19
NN+ + F LL
Sbjct: 239 GMNNKKGSNMLPFPLSHLL 257
[159][TOP]
>UniRef100_C3VXH3 RNA polymerase alpha subunit n=2 Tax=Pinus RepID=C3VXH3_PINPO
Length = 335
Score = 104 bits (260), Expect = 3e-21
Identities = 51/79 (64%), Positives = 62/79 (78%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+AN+SIHSY +GNE +E+LFLEIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++
Sbjct: 179 VRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNID 238
Query: 75 FENNEHKVTLPLFTCHDLL 19
NN+ + F LL
Sbjct: 239 GMNNKKGSNMLPFPLSHLL 257
[160][TOP]
>UniRef100_C1IXP0 RNA polymerase alpha subunit n=1 Tax=Pinus contorta
RepID=C1IXP0_PINCO
Length = 335
Score = 104 bits (260), Expect = 3e-21
Identities = 51/79 (64%), Positives = 62/79 (78%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+AN+SIHSY +GNE +E+LFLEIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++
Sbjct: 179 VRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNID 238
Query: 75 FENNEHKVTLPLFTCHDLL 19
NN+ + F LL
Sbjct: 239 GMNNKKGSNMLPFPLSHLL 257
[161][TOP]
>UniRef100_C3W2L0 RNA polymerase alpha subunit n=1 Tax=Pinus pinaster
RepID=C3W2L0_PINPS
Length = 335
Score = 104 bits (259), Expect = 4e-21
Identities = 48/65 (73%), Positives = 58/65 (89%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+AN+SIHSY +GNE +E+LFLEIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++
Sbjct: 179 VRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNID 238
Query: 75 FENNE 61
NN+
Sbjct: 239 GMNNK 243
[162][TOP]
>UniRef100_C3W1V8 RNA polymerase alpha subunit n=1 Tax=Pinus merkusii
RepID=C3W1V8_9CONI
Length = 335
Score = 104 bits (259), Expect = 4e-21
Identities = 48/65 (73%), Positives = 58/65 (89%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+AN+SIHSY +GNE +E+LFLEIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++
Sbjct: 179 VRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNID 238
Query: 75 FENNE 61
NN+
Sbjct: 239 GMNNK 243
[163][TOP]
>UniRef100_C3VXT2 RNA polymerase alpha subunit n=1 Tax=Pinus resinosa
RepID=C3VXT2_PINRE
Length = 335
Score = 104 bits (259), Expect = 4e-21
Identities = 48/65 (73%), Positives = 58/65 (89%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+AN+SIHSY +GNE +E+LFLEIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++
Sbjct: 179 VRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNID 238
Query: 75 FENNE 61
NN+
Sbjct: 239 GMNNK 243
[164][TOP]
>UniRef100_C1IXV8 RNA polymerase alpha subunit n=1 Tax=Pinus gerardiana
RepID=C1IXV8_PINGE
Length = 335
Score = 104 bits (259), Expect = 4e-21
Identities = 48/65 (73%), Positives = 57/65 (87%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+ N+SIHSY +GNE QE+LFLEIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++
Sbjct: 179 VRDVNYSIHSYGSGNEIQEVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNID 238
Query: 75 FENNE 61
NN+
Sbjct: 239 GMNNK 243
[165][TOP]
>UniRef100_P41629 DNA-directed RNA polymerase subunit alpha n=2 Tax=Pinus thunbergii
RepID=RPOA_PINTH
Length = 335
Score = 104 bits (259), Expect = 4e-21
Identities = 48/65 (73%), Positives = 58/65 (89%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+AN+SIHSY +GNE +E+LFLEIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++
Sbjct: 179 VRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNID 238
Query: 75 FENNE 61
NN+
Sbjct: 239 GMNNK 243
[166][TOP]
>UniRef100_Q4FGA3 RNA polymerase alpha chain (Fragment) n=1 Tax=Ginkgo biloba
RepID=Q4FGA3_GINBI
Length = 337
Score = 103 bits (258), Expect = 5e-21
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRNAN+SIHSY NGNE QEILF EIWTNGSL P EALYEASRNLIDLFIPF+ AEE+ ++
Sbjct: 179 VRNANYSIHSYGNGNEMQEILFSEIWTNGSLAPGEALYEASRNLIDLFIPFMRAEEQNID 238
Query: 75 FENNEHKVTLPLF 37
+N + + LF
Sbjct: 239 GIDNWNGYNMSLF 251
[167][TOP]
>UniRef100_C3VZR7 RNA polymerase alpha subunit n=1 Tax=Pinus aristata
RepID=C3VZR7_9CONI
Length = 335
Score = 103 bits (257), Expect = 6e-21
Identities = 48/65 (73%), Positives = 57/65 (87%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+AN+SIHSY +GNE QE+LFLEIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++
Sbjct: 179 VRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNID 238
Query: 75 FENNE 61
N +
Sbjct: 239 GMNKK 243
[168][TOP]
>UniRef100_C3VZJ9 RNA polymerase alpha subunit n=1 Tax=Pinus albicaulis
RepID=C3VZJ9_9CONI
Length = 335
Score = 103 bits (257), Expect = 6e-21
Identities = 48/65 (73%), Positives = 57/65 (87%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+AN+SIHSY +GNE QE+LFLEIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++
Sbjct: 179 VRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNID 238
Query: 75 FENNE 61
N +
Sbjct: 239 GMNKK 243
[169][TOP]
>UniRef100_C3VXZ8 RNA polymerase alpha subunit n=1 Tax=Pinus rzedowskii
RepID=C3VXZ8_PINRZ
Length = 335
Score = 103 bits (257), Expect = 6e-21
Identities = 48/65 (73%), Positives = 57/65 (87%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+AN+SIHSY +GNE QE+LFLEIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++
Sbjct: 179 VRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNID 238
Query: 75 FENNE 61
N +
Sbjct: 239 GMNKK 243
[170][TOP]
>UniRef100_C3W0M8 RNA polymerase alpha subunit n=1 Tax=Pinus canariensis
RepID=C3W0M8_9CONI
Length = 335
Score = 102 bits (255), Expect = 1e-20
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+ N+SIHSY +GNE +E+LFLEIWTNG LTP+EALYEASRNLIDLFIPFLH EE+ ++
Sbjct: 179 VRDVNYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNLIDLFIPFLHGEEQNID 238
Query: 75 FENNE 61
NN+
Sbjct: 239 GMNNK 243
[171][TOP]
>UniRef100_B7T2T8 RNA polymerase alpha subunit n=1 Tax=Erodium chrysanthum
RepID=B7T2T8_9ROSI
Length = 329
Score = 102 bits (255), Expect = 1e-20
Identities = 50/67 (74%), Positives = 58/67 (86%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+N NHSIHSY NG+ E+LF EIWTNGSLTPKEAL EASR LI+LFIPFLHAEEEK +
Sbjct: 182 VKNVNHSIHSYENGSH--EMLFFEIWTNGSLTPKEALREASRKLINLFIPFLHAEEEKPH 239
Query: 75 FENNEHK 55
FENN+++
Sbjct: 240 FENNQNE 246
[172][TOP]
>UniRef100_Q60F85 DNA-dependent RNA polymerase alpha subunit n=1 Tax=Sphagnum
girgensohnii RepID=Q60F85_9BRYO
Length = 341
Score = 102 bits (254), Expect = 1e-20
Identities = 46/59 (77%), Positives = 56/59 (94%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKL 79
+RNAN+S+HS+ N NE QEILF+EIWTNGS+TPKEALYEASR+LIDLFIPFLHAE+E++
Sbjct: 182 IRNANYSVHSFENKNETQEILFIEIWTNGSVTPKEALYEASRSLIDLFIPFLHAEKEEV 240
[173][TOP]
>UniRef100_Q49C94 RpoA n=1 Tax=Cuscuta europaea RepID=Q49C94_CUSEU
Length = 329
Score = 102 bits (254), Expect = 1e-20
Identities = 55/88 (62%), Positives = 64/88 (72%), Gaps = 3/88 (3%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+NANHSIHSY GNEKQEILFLEIWTNGSLTPKEAL+E++R LID FIPF EEE L
Sbjct: 179 VQNANHSIHSY--GNEKQEILFLEIWTNGSLTPKEALHESARILIDFFIPFFQMEEENLY 236
Query: 75 FENNEHKVTLPLFTCHD---LLAKKKLK 1
+ +H + LP ++ L KKK K
Sbjct: 237 LADAKHTIXLPPLIFYNKVTTLIKKKKK 264
[174][TOP]
>UniRef100_B0FIU5 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta europaea
RepID=B0FIU5_CUSEU
Length = 329
Score = 102 bits (254), Expect = 1e-20
Identities = 55/88 (62%), Positives = 64/88 (72%), Gaps = 3/88 (3%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+NANHSIHSY GNEKQEILFLEIWTNGSLTPKEAL+E++R LID FIPF EEE L
Sbjct: 179 VQNANHSIHSY--GNEKQEILFLEIWTNGSLTPKEALHESARILIDFFIPFFQMEEENLY 236
Query: 75 FENNEHKVTLPLFTCHD---LLAKKKLK 1
+ +H + LP ++ L KKK K
Sbjct: 237 LADAKHTIPLPPLIFYNKVTTLIKKKKK 264
[175][TOP]
>UniRef100_B7ZIR8 RNA polymerase alpha chain n=1 Tax=Keteleeria davidiana
RepID=B7ZIR8_KETDA
Length = 336
Score = 102 bits (253), Expect = 2e-20
Identities = 47/64 (73%), Positives = 56/64 (87%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+AN+SIHSY +GNE +E+LFLEIWTNG LTP+EALYEASRNLID FIPFLH EE+ ++
Sbjct: 179 VRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNLIDFFIPFLHGEEQNID 238
Query: 75 FENN 64
NN
Sbjct: 239 GINN 242
[176][TOP]
>UniRef100_Q5EFZ1 RNA polymerase alpha subunit n=1 Tax=Buxbaumia aphylla
RepID=Q5EFZ1_9BRYO
Length = 340
Score = 101 bits (252), Expect = 2e-20
Identities = 52/87 (59%), Positives = 68/87 (78%), Gaps = 2/87 (2%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAE-EEKL 79
+RNAN+S+HS+ N N+ QE+LF+EIWTNGS+TPK+ALYEASR+LIDLFIPFLHAE E +
Sbjct: 179 IRNANYSVHSFENENKTQEMLFIEIWTNGSITPKDALYEASRSLIDLFIPFLHAERREII 238
Query: 78 NFENNEHKVT-LPLFTCHDLLAKKKLK 1
N NE+K++ + F+ LA K K
Sbjct: 239 NELENEYKLSNISYFSSFSPLADKITK 265
[177][TOP]
>UniRef100_C3VZD6 RNA polymerase alpha subunit n=1 Tax=Abies firma RepID=C3VZD6_ABIFI
Length = 336
Score = 101 bits (252), Expect = 2e-20
Identities = 47/64 (73%), Positives = 56/64 (87%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+AN+SIHSY +GNE +E+LFLEIWTNG LTP+EALYEASRNLIDL IPFLH EE+ ++
Sbjct: 179 VRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNLIDLLIPFLHGEEQNID 238
Query: 75 FENN 64
NN
Sbjct: 239 GMNN 242
[178][TOP]
>UniRef100_Q60F88 DNA-directed RNA polymerase subunit alpha n=1 Tax=Takakia
lepidozioides RepID=RPOA_TAKLE
Length = 341
Score = 101 bits (252), Expect = 2e-20
Identities = 49/81 (60%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
+RN N+S+HS+ NGNE QEILFLEIWTNGS+TPKEALYEASR+LI+LFIPFLHAE+++
Sbjct: 179 IRNVNYSVHSFENGNETQEILFLEIWTNGSVTPKEALYEASRSLINLFIPFLHAEKKEFI 238
Query: 75 FE-NNEHKVTLPLFTCHDLLA 16
+ N ++ + F+ L A
Sbjct: 239 YGLKNTYESNMSYFSSPSLSA 259
[179][TOP]
>UniRef100_Q5EFY8 RNA polymerase alpha subunit n=1 Tax=Oedipodium griffithianum
RepID=Q5EFY8_9BRYO
Length = 340
Score = 100 bits (248), Expect = 7e-20
Identities = 49/87 (56%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKL- 79
+RNAN+S+HS+ + N+ QEILF+EIWTNGS+TPKEALYEASR+LIDLFIPFLHAE++++
Sbjct: 179 IRNANYSVHSFEHENKTQEILFIEIWTNGSITPKEALYEASRSLIDLFIPFLHAEKKEII 238
Query: 78 -NFENNEHKVTLPLFTCHDLLAKKKLK 1
EN + F+ LA + K
Sbjct: 239 NGLENKYESNNMSYFSSFSPLADRITK 265
[180][TOP]
>UniRef100_Q5EFY4 RNA polymerase alpha subunit n=1 Tax=Dendroligotrichum dendroides
RepID=Q5EFY4_9BRYO
Length = 340
Score = 99.4 bits (246), Expect = 1e-19
Identities = 47/68 (69%), Positives = 58/68 (85%), Gaps = 1/68 (1%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAE-EEKL 79
+RNAN+S+HS+ N N+ QEILF+EIWTNGS+TPKEALYEASR+LIDLFIPFLH E +E +
Sbjct: 179 IRNANYSVHSFENNNKIQEILFIEIWTNGSITPKEALYEASRSLIDLFIPFLHTEKKETI 238
Query: 78 NFENNEHK 55
N E+K
Sbjct: 239 NGLKTEYK 246
[181][TOP]
>UniRef100_B7T3M1 RNA polymerase alpha subunit n=1 Tax=Geranium palmatum
RepID=B7T3M1_9ROSI
Length = 329
Score = 99.4 bits (246), Expect = 1e-19
Identities = 52/77 (67%), Positives = 58/77 (75%), Gaps = 2/77 (2%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+N NHSIHSY NG +LFLEIWTNGSLTPKEAL EASR L +LFIPFLHAEE+ +
Sbjct: 182 VKNVNHSIHSYENGIHA--MLFLEIWTNGSLTPKEALREASRKLSNLFIPFLHAEEQNFH 239
Query: 75 FEN--NEHKVTLPLFTC 31
FEN NEH LP+ C
Sbjct: 240 FENNQNEHTDELPIDFC 256
[182][TOP]
>UniRef100_UPI0000E123FA Os05g0292500 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000E123FA
Length = 351
Score = 99.0 bits (245), Expect = 1e-19
Identities = 48/61 (78%), Positives = 51/61 (83%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SI + NGN K EILFLEIWTNGSLTPKEALYEASRNLIDLF+PFLH EEE
Sbjct: 288 VRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTR 347
Query: 75 F 73
F
Sbjct: 348 F 348
[183][TOP]
>UniRef100_C1IXH8 RNA polymerase alpha subunit n=1 Tax=Picea sitchensis
RepID=C1IXH8_PICSI
Length = 336
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/79 (60%), Positives = 60/79 (75%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VR+AN+SIHSY +GNE +E+LFLEIWTNG LTP+EAL EASR LI+LFIPFLH EE+ ++
Sbjct: 179 VRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALSEASRILIELFIPFLHGEEQNID 238
Query: 75 FENNEHKVTLPLFTCHDLL 19
NN +P F +L
Sbjct: 239 GMNNRKGSNMPPFPLSHVL 257
[184][TOP]
>UniRef100_B7T309 RNA polymerase alpha subunit n=1 Tax=Erodium texanum
RepID=B7T309_EROTE
Length = 328
Score = 98.6 bits (244), Expect = 2e-19
Identities = 48/69 (69%), Positives = 57/69 (82%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+N NHSIH+Y NG+ E+LF EIWTNGSLTPKEAL EASR LI+LFIPFLHAEEE +
Sbjct: 182 VKNVNHSIHAYENGSH--EMLFFEIWTNGSLTPKEALREASRKLINLFIPFLHAEEENSH 239
Query: 75 FENNEHKVT 49
ENN+++ T
Sbjct: 240 LENNQNQHT 248
[185][TOP]
>UniRef100_B7T413 RNA polymerase alpha subunit n=1 Tax=Monsonia vanderietiae
RepID=B7T413_9ROSI
Length = 333
Score = 98.2 bits (243), Expect = 3e-19
Identities = 52/78 (66%), Positives = 59/78 (75%), Gaps = 3/78 (3%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEK-- 82
VRN NHSI+SY G+ +EILFLEIWTNGSLTPKEAL EASR LI+LFIPFLHAEEE
Sbjct: 185 VRNVNHSIYSYKRGS--REILFLEIWTNGSLTPKEALREASRKLINLFIPFLHAEEENFY 242
Query: 81 -LNFENNEHKVTLPLFTC 31
L N+H LP+ +C
Sbjct: 243 LLENNQNQHTEELPIDSC 260
[186][TOP]
>UniRef100_A2T365 DNA-directed RNA polymerase subunit alpha n=1 Tax=Angiopteris
evecta RepID=RPOA_ANGEV
Length = 341
Score = 97.8 bits (242), Expect = 3e-19
Identities = 44/65 (67%), Positives = 56/65 (86%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
+R AN+S+HS+ N + QEILF+EIWT+GSLTPKEALYEASRNLIDLF+PFLH EEE++
Sbjct: 179 IRKANYSVHSFGNNKKFQEILFIEIWTDGSLTPKEALYEASRNLIDLFLPFLHTEEEEII 238
Query: 75 FENNE 61
+ +E
Sbjct: 239 SDRDE 243
[187][TOP]
>UniRef100_Q5EFY2 RNA polymerase alpha subunit n=1 Tax=Polytrichum pallidisetum
RepID=Q5EFY2_9BRYO
Length = 338
Score = 97.4 bits (241), Expect = 4e-19
Identities = 43/58 (74%), Positives = 54/58 (93%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEK 82
+RNAN+S+HS+ N N+ QEILF+EIWTNGS+TPKEALYEASR+LIDLFIPFLH E+++
Sbjct: 179 IRNANYSVHSFENNNKIQEILFIEIWTNGSITPKEALYEASRSLIDLFIPFLHPEKKE 236
[188][TOP]
>UniRef100_Q2KKK3 RNA polymerase alpha subunit (Fragment) n=1 Tax=Polytrichadelphus
purpureus RepID=Q2KKK3_9BRYO
Length = 165
Score = 96.3 bits (238), Expect = 1e-18
Identities = 50/87 (57%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAE-EEKL 79
+RNAN+S+HS+ N N+ QEILF+EIWTNGS+TPKEALYEASR+L DLFIPFLH E +E +
Sbjct: 4 IRNANYSVHSFENNNKIQEILFIEIWTNGSITPKEALYEASRSLXDLFIPFLHTEKKETI 63
Query: 78 NFENNEHKVT-LPLFTCHDLLAKKKLK 1
+ E+K + F+ LA K K
Sbjct: 64 DGLKTEYKSNDMSDFSSFSPLANKSTK 90
[189][TOP]
>UniRef100_B7T3F0 RNA polymerase alpha subunit n=1 Tax=Geranium macrorrhizum
RepID=B7T3F0_9ROSI
Length = 329
Score = 96.3 bits (238), Expect = 1e-18
Identities = 48/69 (69%), Positives = 56/69 (81%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+N NHSIHSY NG +LFLEIWTNGSLTPKEAL ASR LI+LFIPFLHAEE+ +
Sbjct: 182 VKNVNHSIHSYENGIHA--MLFLEIWTNGSLTPKEALRGASRKLINLFIPFLHAEEQNCH 239
Query: 75 FENNEHKVT 49
FENN+++ T
Sbjct: 240 FENNQNEHT 248
[190][TOP]
>UniRef100_B1VKC7 RNA polymerase alpha subunit n=1 Tax=Cryptomeria japonica
RepID=B1VKC7_CRYJA
Length = 342
Score = 94.7 bits (234), Expect = 3e-18
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+N N+SIHSY + NE QEILFLEIWTNG L PKEALYEASRNLID F+PFL+A+EE +
Sbjct: 189 VQNVNYSIHSYWSENETQEILFLEIWTNGGLAPKEALYEASRNLIDFFLPFLNAKEENSD 248
Query: 75 FENN 64
N+
Sbjct: 249 GTNS 252
[191][TOP]
>UniRef100_B7T3U2 RNA polymerase alpha subunit n=1 Tax=Monsonia speciosa
RepID=B7T3U2_9ROSI
Length = 331
Score = 93.6 bits (231), Expect = 6e-18
Identities = 51/78 (65%), Positives = 59/78 (75%), Gaps = 3/78 (3%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN NHSIHSY G+ E+LFLEIWTNGSLTPKEAL EASR LI+L +PFLHAEEE
Sbjct: 183 VRNVNHSIHSYERGSH--EMLFLEIWTNGSLTPKEALREASRKLINLLMPFLHAEEENFY 240
Query: 75 F-ENNEHKVT--LPLFTC 31
ENN+++ T LP+ C
Sbjct: 241 LVENNQNQDTEELPIDLC 258
[192][TOP]
>UniRef100_Q85A01 DNA-directed RNA polymerase subunit alpha n=1 Tax=Anthoceros
formosae RepID=RPOA_ANTFO
Length = 340
Score = 91.7 bits (226), Expect = 2e-17
Identities = 41/60 (68%), Positives = 53/60 (88%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
+RNAN+S+HS+ N EKQEILF+E+WTNGSLTPKEAL EAS++LI+LFIP LH ++E+ N
Sbjct: 179 IRNANYSVHSFENEKEKQEILFIEVWTNGSLTPKEALREASQSLINLFIPLLHEKKEREN 238
[193][TOP]
>UniRef100_P06270 DNA-directed RNA polymerase subunit alpha n=1 Tax=Marchantia
polymorpha RepID=RPOA_MARPO
Length = 340
Score = 91.3 bits (225), Expect = 3e-17
Identities = 41/61 (67%), Positives = 55/61 (90%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
+RNAN+S+HS+ + + +EILFLEIWT+GSLTPKEALYEASRNLIDLFIP +++E+++ N
Sbjct: 179 IRNANYSVHSFESEKKIKEILFLEIWTDGSLTPKEALYEASRNLIDLFIPLINSEKKEKN 238
Query: 75 F 73
F
Sbjct: 239 F 239
[194][TOP]
>UniRef100_C5Z5P0 Putative uncharacterized protein Sb10g023655 (Fragment) n=1
Tax=Sorghum bicolor RepID=C5Z5P0_SORBI
Length = 66
Score = 87.4 bits (215), Expect = 5e-16
Identities = 39/53 (73%), Positives = 45/53 (84%)
Frame = -2
Query: 192 FLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLNFENNEHKVTLPLFT 34
FLEIWTNGSLTPKEALYE SRNLIDLF+PF+H EEE NFE N++++T P T
Sbjct: 7 FLEIWTNGSLTPKEALYETSRNLIDLFLPFIHTEEEGTNFEENKNRLTPPFLT 59
[195][TOP]
>UniRef100_Q8WHZ1 DNA-directed RNA polymerase subunit alpha n=1 Tax=Psilotum nudum
RepID=RPOA_PSINU
Length = 340
Score = 85.1 bits (209), Expect = 2e-15
Identities = 43/67 (64%), Positives = 54/67 (80%), Gaps = 2/67 (2%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEK-- 82
+RNAN+SIHS+ + N+ +EILFLE+WTNGSLTP AL EASR+LIDLFI FL+ E+E+
Sbjct: 179 IRNANYSIHSFESNNKVREILFLEVWTNGSLTPGAALSEASRDLIDLFIIFLNMEKEESI 238
Query: 81 LNFENNE 61
ENNE
Sbjct: 239 KEIENNE 245
[196][TOP]
>UniRef100_P60315 DNA-directed RNA polymerase subunit alpha, chloroplastic n=2
Tax=Physcomitrella patens RepID=RPOA_PHYPA
Length = 450
Score = 83.6 bits (205), Expect = 7e-15
Identities = 42/69 (60%), Positives = 56/69 (81%), Gaps = 2/69 (2%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNE-KQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKL 79
VRNAN+S+HSY + + QEILFLEIWTNGS+TP+EAL+EA+R LIDLF+PFLH +++++
Sbjct: 291 VRNANYSVHSYESEPDVTQEILFLEIWTNGSITPEEALHEAARCLIDLFLPFLHPKKKEV 350
Query: 78 -NFENNEHK 55
N HK
Sbjct: 351 TNSATKMHK 359
[197][TOP]
>UniRef100_C5HY86 RNA polymerase a-subunit n=1 Tax=Alsophila spinulosa
RepID=C5HY86_9FILI
Length = 338
Score = 82.8 bits (203), Expect = 1e-14
Identities = 40/75 (53%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKL- 79
VRN N+S+H + +G E +EI F+EIWTNGS TP EAL EAS+NLIDL IPFLH + E +
Sbjct: 179 VRNVNYSVHPFGSGREMREISFIEIWTNGSPTPNEALCEASKNLIDLLIPFLHMKHEDVP 238
Query: 78 NFENNEHKVTLPLFT 34
+FE+ + L + +
Sbjct: 239 HFEDEQDSSDLTILS 253
[198][TOP]
>UniRef100_B0YPQ7 RNA polymerase alpha subunit n=1 Tax=Aneura mirabilis
RepID=B0YPQ7_ANEMR
Length = 342
Score = 82.4 bits (202), Expect = 1e-14
Identities = 39/65 (60%), Positives = 51/65 (78%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
+RNAN+S+HS+ + + +EIL LEIWTNGSLTP++ALYEASRNLIDLFIP ++ E+ N
Sbjct: 180 IRNANYSVHSFGSREKTKEILLLEIWTNGSLTPEKALYEASRNLIDLFIPSMNPGGEEKN 239
Query: 75 FENNE 61
E
Sbjct: 240 SGTKE 244
[199][TOP]
>UniRef100_Q9BBN0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Marsilea
quadrifolia RepID=RPOA_MARQU
Length = 341
Score = 81.6 bits (200), Expect = 2e-14
Identities = 38/75 (50%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKL- 79
VRN N+S+H + +G E +EILF+E+WTNGSLTP EA+ +AS++ IDL PFLH + E +
Sbjct: 179 VRNVNYSVHPFGSGKEMREILFIEVWTNGSLTPTEAISKASKSSIDLLSPFLHTKHEDIP 238
Query: 78 NFENNEHKVTLPLFT 34
+FE+N +L F+
Sbjct: 239 DFESNRDSSSLMKFS 253
[200][TOP]
>UniRef100_A6BM49 RNA polymerase alpha subunit n=2 Tax=Spermatophyta
RepID=A6BM49_BRANA
Length = 326
Score = 79.0 bits (193), Expect = 2e-13
Identities = 41/81 (50%), Positives = 50/81 (61%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N SIHSY + N+ +E+L EIWTNG LTP+EA YEA LIDL +P LH EE+
Sbjct: 182 VRNVNFSIHSYKSENDIREMLIFEIWTNGGLTPREAFYEACWKLIDLIVPLLHMEED--- 238
Query: 75 FENNEHKVTLPLFTCHDLLAK 13
+ LP+ T D L K
Sbjct: 239 MNGAKDFFALPILTRMDKLGK 259
[201][TOP]
>UniRef100_Q5SD25 DNA-directed RNA polymerase subunit alpha n=1 Tax=Huperzia lucidula
RepID=RPOA_HUPLU
Length = 336
Score = 73.6 bits (179), Expect = 7e-12
Identities = 33/67 (49%), Positives = 53/67 (79%), Gaps = 2/67 (2%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEK--QEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEK 82
+R+ N+SIH + + ++ +E+L EIW+NGS+TP+EA+YEASR+ I+LF+PFL AE+EK
Sbjct: 182 IRSVNYSIHCFESHDKSIMKEMLLYEIWSNGSITPEEAIYEASRSSINLFLPFLQAEKEK 241
Query: 81 LNFENNE 61
+F+ +
Sbjct: 242 EDFKGED 248
[202][TOP]
>UniRef100_Q85FJ1 DNA-directed RNA polymerase subunit alpha n=1 Tax=Adiantum
capillus-veneris RepID=RPOA_ADICA
Length = 345
Score = 73.6 bits (179), Expect = 7e-12
Identities = 38/71 (53%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SIH + +G QEILF+EIWTNGSLTP EAL +AS L+DL FL+ ++
Sbjct: 180 VRNVNYSIHLFGSGRATQEILFIEIWTNGSLTPHEALRKASEKLMDLLTTFLYVRGGDVS 239
Query: 75 -FENNEHKVTL 46
FEN E + L
Sbjct: 240 LFENGEDSLDL 250
[203][TOP]
>UniRef100_B7ZII6 RNA polymerase alpha chain n=1 Tax=Ephedra equisetina
RepID=B7ZII6_EPHEU
Length = 258
Score = 70.5 bits (171), Expect = 6e-11
Identities = 34/67 (50%), Positives = 46/67 (68%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
V+N N SIHSY + + QE+L EIWTNG LTP+E +YEA +L+DL IP L E+ N
Sbjct: 180 VQNVNFSIHSYKSSDNIQEMLIFEIWTNGGLTPRETIYEACWSLLDLIIPLLCVEQ---N 236
Query: 75 FENNEHK 55
+N++ K
Sbjct: 237 IKNSQKK 243
[204][TOP]
>UniRef100_Q32RM8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Zygnema
circumcarinatum RepID=RPOA_ZYGCR
Length = 356
Score = 68.6 bits (166), Expect = 2e-10
Identities = 35/67 (52%), Positives = 45/67 (67%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKLN 76
VRN N+SIHS G+ +QE+L LE+WTNGSLTP+E + +AS+NL DL P L E
Sbjct: 176 VRNMNYSIHSLGEGDMRQEMLVLEVWTNGSLTPQEVISQASQNLNDLLKPLLKV-ERYFQ 234
Query: 75 FENNEHK 55
+ N HK
Sbjct: 235 AKQNIHK 241
[205][TOP]
>UniRef100_A9SHY0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SHY0_PHYPA
Length = 438
Score = 65.5 bits (158), Expect = 2e-09
Identities = 31/55 (56%), Positives = 44/55 (80%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAE 91
V AN+S+HS+ + +EILFLEI+TNGS++P+EAL EA+R+LIDL +P L +E
Sbjct: 280 VVQANYSVHSFEVEDVTREILFLEIYTNGSISPEEALIEAARSLIDLLLPLLESE 334
[206][TOP]
>UniRef100_A9CP51 DNA-directed RNA polymerase alpha chain n=1 Tax=Physcomitrella
patens RepID=A9CP51_PHYPA
Length = 525
Score = 65.5 bits (158), Expect = 2e-09
Identities = 31/55 (56%), Positives = 44/55 (80%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAE 91
V AN+S+HS+ + +EILFLEI+TNGS++P+EAL EA+R+LIDL +P L +E
Sbjct: 367 VVQANYSVHSFEVEDVTREILFLEIYTNGSISPEEALIEAARSLIDLLLPLLESE 421
[207][TOP]
>UniRef100_Q8M9V7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Chaetosphaeridium
globosum RepID=RPOA_CHAGL
Length = 334
Score = 65.5 bits (158), Expect = 2e-09
Identities = 28/59 (47%), Positives = 43/59 (72%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKL 79
+R+ N+SIHS+ + +E L +E+WTNGS+ PKEA+ EAS NL++LF P + E ++L
Sbjct: 179 IRSVNYSIHSFEDEKATKEFLIVEVWTNGSIEPKEAIKEASYNLVNLFTPLVSQEYQQL 237
[208][TOP]
>UniRef100_A7Q481 Chromosome chr9 scaffold_49, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7Q481_VITVI
Length = 150
Score = 65.1 bits (157), Expect = 2e-09
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEAS 133
V+NANH+IH Y N NE+QEILFL++WTN +LTPKEA +EAS
Sbjct: 108 VQNANHNIHFYGNVNERQEILFLKLWTNKNLTPKEAFHEAS 148
[209][TOP]
>UniRef100_Q1ACG7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Chara vulgaris
RepID=RPOA_CHAVU
Length = 358
Score = 62.4 bits (150), Expect = 2e-08
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
Frame = -2
Query: 255 VRNANHSIHSYVN-GNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKL 79
+RN N+SIH G+ K E+L LEIWTNGS+TPKEA ++AS ++++F+ ++ + ++
Sbjct: 176 IRNVNYSIHPVEKAGDWKSELLILEIWTNGSITPKEAFHQASEKIMNIFLSLSNSSDNQI 235
Query: 78 ------NFENNE 61
NFE E
Sbjct: 236 QEKSTKNFEEKE 247
[210][TOP]
>UniRef100_O98462 DNA-directed RNA polymerase subunit alpha n=1 Tax=Spirogyra maxima
RepID=RPOA_SPIMX
Length = 344
Score = 59.7 bits (143), Expect = 1e-07
Identities = 30/57 (52%), Positives = 39/57 (68%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEE 85
VRN N SIH+ E+QE L LEIWTNG++TP +AL + S NLI LF+P E++
Sbjct: 181 VRNVNFSIHNLA---EQQEALILEIWTNGAITPLDALRQGSENLIHLFLPPFGLEDD 234
[211][TOP]
>UniRef100_C7B2H8 RNA polymerase alpha chain n=1 Tax=Selaginella moellendorffii
RepID=C7B2H8_9TRAC
Length = 247
Score = 57.4 bits (137), Expect = 5e-07
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 2/55 (3%)
Frame = -2
Query: 255 VRNANHSIHSYVN--GNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLH 97
+R+AN+SIH + G +E+L LE T+GS TP+EA+YEASRNL +LF PF H
Sbjct: 180 IRHANYSIHRLGSHGGGIMKEMLLLEARTDGSPTPREAIYEASRNLANLFSPFPH 234
[212][TOP]
>UniRef100_B2Y1Z1 RNA polymerase alpha chain n=1 Tax=Welwitschia mirabilis
RepID=B2Y1Z1_WELMI
Length = 340
Score = 56.2 bits (134), Expect = 1e-06
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQ--EILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEK 82
VR+ ++++ Y + + +IL E+WTNG LTPKEALYEA LIDL IP L +
Sbjct: 186 VRSVTYNVYFYKDEYDIHIYDILIFELWTNGELTPKEALYEACWRLIDLIIPLL--DVPL 243
Query: 81 LNFENNEHKVTLPL 40
L+ E + K ++PL
Sbjct: 244 LHVEGSGVKESIPL 257
[213][TOP]
>UniRef100_Q32RU7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Staurastrum
punctulatum RepID=RPOA_STAPU
Length = 383
Score = 56.2 bits (134), Expect = 1e-06
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Frame = -2
Query: 255 VRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLF----IPFLHAE 91
V+ AN SIHS + Q++L LEIWTN +LTP EALY+A +L++LF P LH E
Sbjct: 186 VQKANFSIHSVGDPKGLQQLLLLEIWTNKTLTPAEALYQAHASLLNLFHQISPPLLHKE 244
[214][TOP]
>UniRef100_A0YJS0 DNA-directed RNA polymerase alpha subunit n=1 Tax=Lyngbya sp. PCC
8106 RepID=A0YJS0_9CYAN
Length = 314
Score = 53.9 bits (128), Expect = 6e-06
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = -2
Query: 255 VRNANHSIH-SYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEKL 79
VR N+++ + V G+ +++ L L+IWTNGSLTP+EAL +A+ L+DLF+P E +
Sbjct: 173 VRKVNYTVEDARVGGSLEKDRLILDIWTNGSLTPQEALSQAATILVDLFVPLKDITLESI 232
Query: 78 NFENNE 61
+ +
Sbjct: 233 KTDQTD 238