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[1][TOP]
>UniRef100_UPI0001983662 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001983662
Length = 540
Score = 201 bits (510), Expect(2) = 1e-63
Identities = 94/103 (91%), Positives = 97/103 (94%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI+FSEFVARHIGE+EGIILEAETGD LGKHRGFWFYTIGQRQGLRLPGG
Sbjct: 278 KDSQGICFLGKIKFSEFVARHIGEKEGIILEAETGDLLGKHRGFWFYTIGQRQGLRLPGG 337
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPP 403
PWYVVEKDVKNNVVFVSRNYFS DKRRR+FRVGSLKW S PP
Sbjct: 338 PWYVVEKDVKNNVVFVSRNYFSLDKRRRLFRVGSLKWISREPP 380
Score = 66.2 bits (160), Expect(2) = 1e-63
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QLKRL+FPLGCIPKDEVR LATK DLPN+DRKD + F
Sbjct: 247 QLKRLIFPLGCIPKDEVRSLATKLDLPNRDRKDSQGICF 285
[2][TOP]
>UniRef100_A7NZR6 Chromosome chr6 scaffold_3, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7NZR6_VITVI
Length = 536
Score = 201 bits (510), Expect(2) = 1e-63
Identities = 94/103 (91%), Positives = 97/103 (94%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI+FSEFVARHIGE+EGIILEAETGD LGKHRGFWFYTIGQRQGLRLPGG
Sbjct: 274 KDSQGICFLGKIKFSEFVARHIGEKEGIILEAETGDLLGKHRGFWFYTIGQRQGLRLPGG 333
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPP 403
PWYVVEKDVKNNVVFVSRNYFS DKRRR+FRVGSLKW S PP
Sbjct: 334 PWYVVEKDVKNNVVFVSRNYFSLDKRRRLFRVGSLKWISREPP 376
Score = 66.2 bits (160), Expect(2) = 1e-63
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QLKRL+FPLGCIPKDEVR LATK DLPN+DRKD + F
Sbjct: 243 QLKRLIFPLGCIPKDEVRSLATKLDLPNRDRKDSQGICF 281
[3][TOP]
>UniRef100_B9GF12 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GF12_POPTR
Length = 434
Score = 196 bits (498), Expect(2) = 2e-62
Identities = 92/102 (90%), Positives = 94/102 (92%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI+FSEFV RHIGE EG+ILEAETGDFLG HRGFWFYTIGQRQGLRLPGG
Sbjct: 202 KDSQGICFLGKIKFSEFVGRHIGESEGVILEAETGDFLGIHRGFWFYTIGQRQGLRLPGG 261
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PWYVVEKDVKNNVVFVSRNYFS DKRRR FRVGSLKW SG P
Sbjct: 262 PWYVVEKDVKNNVVFVSRNYFSLDKRRRSFRVGSLKWLSGSP 303
Score = 67.0 bits (162), Expect(2) = 2e-62
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QLKRL+FPLGCIPK+EVR LA+KFDLPNKDRKD + F
Sbjct: 171 QLKRLIFPLGCIPKEEVRNLASKFDLPNKDRKDSQGICF 209
[4][TOP]
>UniRef100_B9RIE1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
putative n=1 Tax=Ricinus communis RepID=B9RIE1_RICCO
Length = 497
Score = 202 bits (514), Expect(2) = 2e-61
Identities = 93/103 (90%), Positives = 98/103 (95%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI+FSEFVARHIGE EGI+LEAETGDFLG HRGFWFYTIGQRQGLRLPGG
Sbjct: 265 KDSQGICFLGKIKFSEFVARHIGEMEGIMLEAETGDFLGNHRGFWFYTIGQRQGLRLPGG 324
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPP 403
PWYVVEKDVKNNVVFVSRNYFSFDKRRR+ RVGSL+WF+G PP
Sbjct: 325 PWYVVEKDVKNNVVFVSRNYFSFDKRRRLLRVGSLRWFNGSPP 367
Score = 57.4 bits (137), Expect(2) = 2e-61
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL+RL+FPLG I KDEVR+LAT F+LPNKDRKD + F
Sbjct: 234 QLRRLIFPLGGISKDEVRKLATLFNLPNKDRKDSQGICF 272
[5][TOP]
>UniRef100_Q56XT9 Putative uncharacterized protein At1g51310 n=1 Tax=Arabidopsis
thaliana RepID=Q56XT9_ARATH
Length = 497
Score = 192 bits (488), Expect(2) = 3e-61
Identities = 89/102 (87%), Positives = 94/102 (92%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI+FS+FV RHIGE EGIILEAE+GDFLG HRGFWFYTIGQRQGLRLPGG
Sbjct: 276 KDSQGICFLGKIKFSDFVCRHIGEMEGIILEAESGDFLGNHRGFWFYTIGQRQGLRLPGG 335
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PWYVVEKD KNNVVFVSRNY+S DKRRRIFRVGSL+W SG P
Sbjct: 336 PWYVVEKDTKNNVVFVSRNYYSIDKRRRIFRVGSLRWNSGKP 377
Score = 66.6 bits (161), Expect(2) = 3e-61
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QLKRLLFPLGC+ KDEVR+LAT+FDLPNKDRKD + F
Sbjct: 245 QLKRLLFPLGCVKKDEVRKLATQFDLPNKDRKDSQGICF 283
[6][TOP]
>UniRef100_Q9SYD2 F11M15.16 protein n=2 Tax=Arabidopsis thaliana RepID=Q9SYD2_ARATH
Length = 421
Score = 192 bits (488), Expect(2) = 3e-61
Identities = 89/102 (87%), Positives = 94/102 (92%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI+FS+FV RHIGE EGIILEAE+GDFLG HRGFWFYTIGQRQGLRLPGG
Sbjct: 200 KDSQGICFLGKIKFSDFVCRHIGEMEGIILEAESGDFLGNHRGFWFYTIGQRQGLRLPGG 259
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PWYVVEKD KNNVVFVSRNY+S DKRRRIFRVGSL+W SG P
Sbjct: 260 PWYVVEKDTKNNVVFVSRNYYSIDKRRRIFRVGSLRWNSGKP 301
Score = 66.6 bits (161), Expect(2) = 3e-61
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QLKRLLFPLGC+ KDEVR+LAT+FDLPNKDRKD + F
Sbjct: 169 QLKRLLFPLGCVKKDEVRKLATQFDLPNKDRKDSQGICF 207
[7][TOP]
>UniRef100_B8APC1 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8APC1_ORYSI
Length = 488
Score = 186 bits (473), Expect(2) = 8e-58
Identities = 85/104 (81%), Positives = 93/104 (89%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGK++FSEFV R IGE EG++LEAETGD+LG HRGFWFYTIGQRQGLRLPGG
Sbjct: 272 KDSQGICFLGKVKFSEFVERQIGEMEGVLLEAETGDYLGTHRGFWFYTIGQRQGLRLPGG 331
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PWYVVEKDV+NNVVFVSRNY+S DKRRR FRVGSL WFS P+
Sbjct: 332 PWYVVEKDVQNNVVFVSRNYYSLDKRRRTFRVGSLNWFSNSGPT 375
Score = 61.2 bits (147), Expect(2) = 8e-58
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL+RLLFPLGCI KDEVRRLA + DLPN+DRKD + F
Sbjct: 241 QLRRLLFPLGCITKDEVRRLAAQMDLPNQDRKDSQGICF 279
[8][TOP]
>UniRef100_Q10R16 Os03g0174600 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q10R16_ORYSJ
Length = 488
Score = 184 bits (466), Expect(2) = 5e-57
Identities = 84/104 (80%), Positives = 92/104 (88%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGK++FSEFV R IGE EG++LEAETGD+LG HRGFWFYTIGQRQGLRLPGG
Sbjct: 272 KDSQGICFLGKVKFSEFVERQIGEMEGVLLEAETGDYLGTHRGFWFYTIGQRQGLRLPGG 331
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PWYVVEK V+NNVVFVSRNY+S DKRRR FRVGSL WFS P+
Sbjct: 332 PWYVVEKGVQNNVVFVSRNYYSLDKRRRTFRVGSLNWFSNSGPT 375
Score = 61.2 bits (147), Expect(2) = 5e-57
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL+RLLFPLGCI KDEVRRLA + DLPN+DRKD + F
Sbjct: 241 QLRRLLFPLGCITKDEVRRLAAQMDLPNQDRKDSQGICF 279
[9][TOP]
>UniRef100_B9FBL4 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9FBL4_ORYSJ
Length = 410
Score = 184 bits (466), Expect(2) = 5e-57
Identities = 84/104 (80%), Positives = 92/104 (88%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGK++FSEFV R IGE EG++LEAETGD+LG HRGFWFYTIGQRQGLRLPGG
Sbjct: 272 KDSQGICFLGKVKFSEFVERQIGEMEGVLLEAETGDYLGTHRGFWFYTIGQRQGLRLPGG 331
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PWYVVEK V+NNVVFVSRNY+S DKRRR FRVGSL WFS P+
Sbjct: 332 PWYVVEKGVQNNVVFVSRNYYSLDKRRRTFRVGSLNWFSNSGPT 375
Score = 61.2 bits (147), Expect(2) = 5e-57
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL+RLLFPLGCI KDEVRRLA + DLPN+DRKD + F
Sbjct: 241 QLRRLLFPLGCITKDEVRRLAAQMDLPNQDRKDSQGICF 279
[10][TOP]
>UniRef100_C5WVW0 Putative uncharacterized protein Sb01g045520 n=1 Tax=Sorghum
bicolor RepID=C5WVW0_SORBI
Length = 489
Score = 190 bits (483), Expect = 4e-47
Identities = 88/105 (83%), Positives = 94/105 (89%)
Frame = +2
Query: 89 G*KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLP 268
G K SQGICFLGK++FSEFV RHIGE EGIILEAE+GD+LGKHRGFWFYTIGQRQGLRLP
Sbjct: 270 GRKDSQGICFLGKVKFSEFVERHIGEMEGIILEAESGDYLGKHRGFWFYTIGQRQGLRLP 329
Query: 269 GGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPP 403
GGPWYVVEKDV+NNVVFVSRNY+S DKRRR FRVGSL WF P
Sbjct: 330 GGPWYVVEKDVQNNVVFVSRNYYSLDKRRRTFRVGSLNWFDSSGP 374
Score = 57.8 bits (138), Expect = 4e-07
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL+RLLFPLGCI KDEVRRLAT+ LPN+ RKD + F
Sbjct: 241 QLRRLLFPLGCITKDEVRRLATQMGLPNQGRKDSQGICF 279
[11][TOP]
>UniRef100_B6U875 tRNA methyltransferase n=1 Tax=Zea mays RepID=B6U875_MAIZE
Length = 486
Score = 189 bits (480), Expect = 8e-47
Identities = 87/105 (82%), Positives = 94/105 (89%)
Frame = +2
Query: 89 G*KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLP 268
G K SQGICFLGK++FSEFV RHIGE+EGIILEAE+GD+LG HRGFWFYTIGQRQGLRLP
Sbjct: 267 GRKDSQGICFLGKVKFSEFVERHIGEKEGIILEAESGDYLGIHRGFWFYTIGQRQGLRLP 326
Query: 269 GGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPP 403
GGPWYVVEKDV+NNVVFVSRNY+S DKRRR FRVGSL WF P
Sbjct: 327 GGPWYVVEKDVQNNVVFVSRNYYSLDKRRRTFRVGSLNWFDNFGP 371
Score = 57.4 bits (137), Expect = 5e-07
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL+RLLFPLGCI KDEVRRLAT+ LPN+ RKD + F
Sbjct: 238 QLRRLLFPLGCITKDEVRRLATQMALPNQGRKDSQGICF 276
[12][TOP]
>UniRef100_C0HDS5 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C0HDS5_MAIZE
Length = 329
Score = 189 bits (479), Expect = 1e-46
Identities = 87/105 (82%), Positives = 94/105 (89%)
Frame = +2
Query: 89 G*KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLP 268
G K SQGICFLGK++FSEFV RHIGE+EGIILEAE+GD+LG HRGFWFYTIGQRQGLRLP
Sbjct: 110 GRKDSQGICFLGKVKFSEFVERHIGEKEGIILEAESGDYLGIHRGFWFYTIGQRQGLRLP 169
Query: 269 GGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPP 403
GGPWYVVEKDV+NNVVFVSRNY+S DKRRR FRVGSL WF P
Sbjct: 170 GGPWYVVEKDVQNNVVFVSRNYYSLDKRRRTFRVGSLNWFDNCGP 214
Score = 57.8 bits (138), Expect = 4e-07
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL+RLLFPLGCI KDEVRRLAT+ LPN+ RKD + F
Sbjct: 81 QLRRLLFPLGCITKDEVRRLATQMGLPNQGRKDSQGICF 119
[13][TOP]
>UniRef100_B4FBM7 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FBM7_MAIZE
Length = 486
Score = 189 bits (479), Expect = 1e-46
Identities = 87/105 (82%), Positives = 94/105 (89%)
Frame = +2
Query: 89 G*KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLP 268
G K SQGICFLGK++FSEFV RHIGE+EGIILEAE+GD+LG HRGFWFYTIGQRQGLRLP
Sbjct: 267 GRKDSQGICFLGKVKFSEFVERHIGEKEGIILEAESGDYLGIHRGFWFYTIGQRQGLRLP 326
Query: 269 GGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPP 403
GGPWYVVEKDV+NNVVFVSRNY+S DKRRR FRVGSL WF P
Sbjct: 327 GGPWYVVEKDVQNNVVFVSRNYYSLDKRRRTFRVGSLNWFDNCGP 371
Score = 57.8 bits (138), Expect = 4e-07
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL+RLLFPLGCI KDEVRRLAT+ LPN+ RKD + F
Sbjct: 238 QLRRLLFPLGCITKDEVRRLATQMGLPNQGRKDSQGICF 276
[14][TOP]
>UniRef100_A9SVD7 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9SVD7_PHYPA
Length = 376
Score = 166 bits (420), Expect(2) = 2e-45
Identities = 73/104 (70%), Positives = 88/104 (84%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGK++FS+F+A+H+GE EG +LEAETG+ LG H+GFWFYT+GQR+GLR G
Sbjct: 197 KDSQGICFLGKVKFSDFIAKHLGESEGRMLEAETGELLGLHKGFWFYTMGQRKGLRFSNG 256
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+VV KD+ NNVVFVSR+YFS DKRRR FRV S WFSG PP+
Sbjct: 257 PWFVVAKDIVNNVVFVSRHYFSEDKRRRSFRVDSFNWFSGFPPA 300
Score = 40.4 bits (93), Expect(2) = 2e-45
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL RL+FPLG K EVR+LA L NK+RKD + F
Sbjct: 166 QLSRLIFPLGGFTKAEVRQLAEVMGLYNKNRKDSQGICF 204
[15][TOP]
>UniRef100_C1FJ72 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FJ72_9CHLO
Length = 478
Score = 150 bits (379), Expect = 4e-35
Identities = 68/104 (65%), Positives = 78/104 (75%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGK++FSEFVA H+GER G I+E ETG LG H GFWF+TIGQR GL L GG
Sbjct: 227 KDSQGICFLGKVKFSEFVAEHLGERPGAIVELETGTRLGTHSGFWFHTIGQRSGLGLSGG 286
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PWYV KDV NVV+V+R+Y+S DK R FRVG W SG P+
Sbjct: 287 PWYVAAKDVPGNVVYVTRDYYSVDKERNTFRVGEFSWLSGTAPA 330
[16][TOP]
>UniRef100_Q00YV6 TRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (ISS)
n=1 Tax=Ostreococcus tauri RepID=Q00YV6_OSTTA
Length = 467
Score = 143 bits (361), Expect = 5e-33
Identities = 65/105 (61%), Positives = 76/105 (72%)
Frame = +2
Query: 89 G*KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLP 268
G K SQGICFLGK++FSEF+A H+GE G I+E ETG LGKHR +WF+TIGQR GL L
Sbjct: 276 GRKDSQGICFLGKVKFSEFIAEHLGEMPGDIIEVETGKVLGKHRAYWFHTIGQRSGLFLH 335
Query: 269 GGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPP 403
GGPWYV KD NNVV+V+R+Y+S DK R F V W SG P
Sbjct: 336 GGPWYVAGKDCVNNVVYVTRDYYSLDKSRDTFNVAGFNWISGKEP 380
[17][TOP]
>UniRef100_A4S4S2 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S4S2_OSTLU
Length = 394
Score = 141 bits (355), Expect = 3e-32
Identities = 63/105 (60%), Positives = 76/105 (72%)
Frame = +2
Query: 89 G*KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLP 268
G K SQGICFLGK++FSEF+A H+GE G I+E E+G LGKHR +WF+TIGQR GL L
Sbjct: 199 GRKDSQGICFLGKVKFSEFIAEHLGEMPGDIIEVESGKVLGKHRAYWFHTIGQRSGLFLH 258
Query: 269 GGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPP 403
GGPWYV KD NN+V+V+R+Y+S DK R F V W SG P
Sbjct: 259 GGPWYVAGKDCVNNIVYVTRDYYSLDKARDTFTVAGFNWISGQEP 303
[18][TOP]
>UniRef100_A1R0A7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Borrelia turicatae
91E135 RepID=MNMA_BORT9
Length = 354
Score = 117 bits (293), Expect(2) = 3e-32
Identities = 48/99 (48%), Positives = 71/99 (71%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI++ EF+ H+GE +G I+E ETG LG H G+WF+TIGQR+G++L G
Sbjct: 189 KDSQGICFLGKIKYDEFIKYHLGELKGNIIEQETGKILGTHNGYWFFTIGQRKGIKLSHG 248
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFS 391
PW+V EKD++NN++++S + + ++ F V W +
Sbjct: 249 PWFVTEKDIQNNIIYISNSINYLKQGKQQFLVHKTNWIN 287
Score = 45.1 bits (105), Expect(2) = 3e-32
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ +L FPLG + K E+R++A K DLPNK+RKD + F
Sbjct: 158 QISKLHFPLGDLLKTEIRQIAQKIDLPNKNRKDSQGICF 196
[19][TOP]
>UniRef100_C1N0Y8 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N0Y8_9CHLO
Length = 384
Score = 136 bits (342), Expect = 8e-31
Identities = 60/92 (65%), Positives = 75/92 (81%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGK++FSEFVA H+GER G I+E ETG +G+HRGFWF+TIGQR GL L GG
Sbjct: 206 KDSQGICFLGKVKFSEFVAEHLGERPGKIVEIETGLEIGEHRGFWFHTIGQRSGLGLSGG 265
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRV 370
PWYV KD K N+VF++++Y++ DK RR FR+
Sbjct: 266 PWYVCGKDAKRNIVFITKDYYAGDKERRAFRL 297
[20][TOP]
>UniRef100_A8IV15 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IV15_CHLRE
Length = 365
Score = 131 bits (330), Expect = 2e-29
Identities = 61/99 (61%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGK+RFSEFV H+GE G +LEAETG LG H G+WFYT+GQR G++LPGG
Sbjct: 200 KDSQGICFLGKVRFSEFVKEHLGEWHGPLLEAETGRPLGTHAGYWFYTVGQRGGIKLPGG 259
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFD--KRRRIFRVGSLKW 385
PWYVV KD NVV VSR+Y+ + K R F G W
Sbjct: 260 PWYVVAKDTARNVVLVSRSYYDCEGGKARNAFTCGPFNW 298
[21][TOP]
>UniRef100_B7XV19 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Borrelia garinii Far04 RepID=B7XV19_BORGA
Length = 344
Score = 127 bits (319), Expect = 4e-28
Identities = 50/102 (49%), Positives = 77/102 (75%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI+++EF+ H+GE++G I+E ETG +G H G+WF+T+GQR+G++L G
Sbjct: 189 KDSQGICFLGKIKYNEFIKYHLGEKKGNIVEKETGKIIGIHNGYWFFTVGQRRGIKLSNG 248
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PW+V+EKD+K N++++S N + +R F V + W +G+P
Sbjct: 249 PWFVIEKDLKKNIIYISHNENYLKQAKRKFLVHEIHWINGMP 290
[22][TOP]
>UniRef100_B7XS73 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Borrelia garinii PBr RepID=B7XS73_BORGA
Length = 355
Score = 127 bits (319), Expect = 4e-28
Identities = 50/102 (49%), Positives = 77/102 (75%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI+++EF+ H+GE++G I+E ETG +G H G+WF+T+GQR+G++L G
Sbjct: 189 KDSQGICFLGKIKYNEFIKYHLGEKKGNIVEKETGKIIGIHNGYWFFTVGQRRGIKLSNG 248
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PW+V+EKD+K N++++S N + +R F V + W +G+P
Sbjct: 249 PWFVIEKDLKKNIIYISHNENYLKQAKRKFLVHEIHWINGMP 290
[23][TOP]
>UniRef100_Q660I8 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Borrelia garinii
RepID=MNMA_BORGA
Length = 355
Score = 125 bits (315), Expect = 1e-27
Identities = 49/102 (48%), Positives = 77/102 (75%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI+++EF+ H+GE++G I+E ETG +G H G+WF+T+GQR+G++L G
Sbjct: 189 KDSQGICFLGKIKYNEFIKYHLGEKKGNIVEKETGKIIGIHNGYWFFTVGQRRGIKLSNG 248
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PW+V+EKD++ N++++S N + +R F V + W +G+P
Sbjct: 249 PWFVIEKDLEKNIIYISHNENYLKQAKRKFLVHEIHWINGMP 290
[24][TOP]
>UniRef100_UPI00016B3886 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Borrelia afzelii ACA-1 RepID=UPI00016B3886
Length = 355
Score = 125 bits (313), Expect = 2e-27
Identities = 49/102 (48%), Positives = 76/102 (74%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI+++EF+ H+GE++G I+E ETG +G H G+WF+T+GQR+G++L G
Sbjct: 189 KDSQGICFLGKIKYNEFIKYHLGEKKGNIIEKETGKIIGTHNGYWFFTVGQRRGIKLSNG 248
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PW+V+EKD++ N++++S N + +R F V + W +G P
Sbjct: 249 PWFVIEKDLEKNIIYISHNENYSKQAKRKFLVHEIHWINGTP 290
[25][TOP]
>UniRef100_C9LGJ1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Prevotella tannerae ATCC 51259 RepID=C9LGJ1_9BACT
Length = 364
Score = 125 bits (313), Expect = 2e-27
Identities = 52/92 (56%), Positives = 72/92 (78%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI FSE +++GE+EG+++E ETG+ +GKH+G+WFYTIGQR+GL GG
Sbjct: 190 KDSQGICFLGKISFSELARKYLGEKEGLVVEQETGNIIGKHKGYWFYTIGQRKGLGFGGG 249
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRV 370
PWYVV KD+K N+++VSR + + + FR+
Sbjct: 250 PWYVVRKDIKRNIIYVSRGFETKAAYGKAFRI 281
[26][TOP]
>UniRef100_Q0SMH1 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Borrelia afzelii PKo
RepID=MNMA_BORAP
Length = 355
Score = 125 bits (313), Expect = 2e-27
Identities = 49/102 (48%), Positives = 76/102 (74%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI+++EF+ H+GE++G I+E ETG +G H G+WF+T+GQR+G++L G
Sbjct: 189 KDSQGICFLGKIKYNEFIKYHLGEKKGNIIEKETGKIIGTHNGYWFFTVGQRRGIKLSNG 248
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PW+V+EKD++ N++++S N + +R F V + W +G P
Sbjct: 249 PWFVIEKDLEKNIIYISHNENYSKQAKRKFLVHEIHWINGTP 290
[27][TOP]
>UniRef100_UPI00016B3CD1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Borrelia burgdorferi 156a RepID=UPI00016B3CD1
Length = 355
Score = 124 bits (311), Expect = 3e-27
Identities = 49/102 (48%), Positives = 75/102 (73%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI+++EF+ H+GE++G I+E ETG +G H G+WF+T+GQR+G++L G
Sbjct: 189 KDSQGICFLGKIKYNEFIKYHLGEKKGNIIEKETGKIIGIHNGYWFFTVGQRRGIKLSNG 248
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PW+V+EKD+K N++++S N + +R F V + W + P
Sbjct: 249 PWFVIEKDLKKNIIYISHNENYLKQAKRKFLVHEIHWINNTP 290
[28][TOP]
>UniRef100_C0SZF1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Borrelia burgdorferi 29805 RepID=C0SZF1_BORBU
Length = 355
Score = 124 bits (310), Expect = 4e-27
Identities = 49/102 (48%), Positives = 75/102 (73%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI+++EF+ H+GE++G I+E ETG +G H G+WF+T+GQR+G++L G
Sbjct: 189 KDSQGICFLGKIKYNEFIKYHLGEKKGNIIEKETGKIIGIHNGYWFFTVGQRRGIKLSNG 248
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PW+V+EKD+K N++++S N + +R F V + W + P
Sbjct: 249 PWFVIEKDLKKNIIYISHNENYLKQAKRKFLVHEIHWINDTP 290
[29][TOP]
>UniRef100_UPI00016B3292 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Borrelia valaisiana VS116 RepID=UPI00016B3292
Length = 355
Score = 123 bits (308), Expect = 7e-27
Identities = 49/102 (48%), Positives = 75/102 (73%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI+++EF+ H+GE +G I+E ETG +G H G+WF+T+GQR+G++L G
Sbjct: 189 KDSQGICFLGKIKYNEFIKYHLGEEKGNIIEKETGKIMGIHNGYWFFTVGQRRGIKLSNG 248
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PW+V+EKD++ N+++VS N + +R F V + W + +P
Sbjct: 249 PWFVIEKDLEKNIIYVSHNENYLKQAKRKFLVHEIHWINDIP 290
[30][TOP]
>UniRef100_B9X7W4 tRNA-methyltransferase n=1 Tax=Borrelia spielmanii A14S
RepID=B9X7W4_9SPIO
Length = 355
Score = 123 bits (308), Expect = 7e-27
Identities = 49/102 (48%), Positives = 76/102 (74%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI+++EF+ H+GE++G I+E ETG +G H G+WF+T+GQR+G++L G
Sbjct: 189 KDSQGICFLGKIKYNEFIKYHLGEKKGNIIEKETGRIIGIHDGYWFFTVGQRRGIKLSNG 248
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PW+V+EKD++ N++++S N + +R F V + W +G P
Sbjct: 249 PWFVIEKDLEKNIIYISHNENYSKQAKRKFLVHEIHWINGTP 290
[31][TOP]
>UniRef100_UPI00017F4679 tRNA-methyltransferase n=1 Tax=Borrelia burgdorferi CA-11.2a
RepID=UPI00017F4679
Length = 355
Score = 122 bits (306), Expect = 1e-26
Identities = 48/102 (47%), Positives = 75/102 (73%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI+++EF+ H+GE++G I+E ETG +G H G+WF+T+GQR+G++L G
Sbjct: 189 KDSQGICFLGKIKYNEFIKYHLGEKKGNIIEKETGKIIGIHNGYWFFTVGQRRGIKLSNG 248
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PW+V+EKD++ N++++S N + +R F V + W + P
Sbjct: 249 PWFVIEKDLEKNIIYISHNENYLKQAKRKFLVHEIHWINDTP 290
[32][TOP]
>UniRef100_B9X2P4 tRNA-methyltransferase n=3 Tax=Borrelia burgdorferi
RepID=B9X2P4_BORBU
Length = 355
Score = 122 bits (306), Expect = 1e-26
Identities = 48/102 (47%), Positives = 75/102 (73%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI+++EF+ H+GE++G I+E ETG +G H G+WF+T+GQR+G++L G
Sbjct: 189 KDSQGICFLGKIKYNEFIKYHLGEKKGNIIEKETGKIIGIHNGYWFFTVGQRRGIKLSNG 248
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PW+V+EKD++ N++++S N + +R F V + W + P
Sbjct: 249 PWFVIEKDLEKNIIYISHNENYLKQAKRKFLVHEIHWINDTP 290
[33][TOP]
>UniRef100_B7J2N7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Borrelia burgdorferi ZS7
RepID=MNMA_BORBZ
Length = 355
Score = 122 bits (306), Expect = 1e-26
Identities = 48/102 (47%), Positives = 75/102 (73%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI+++EF+ H+GE++G I+E ETG +G H G+WF+T+GQR+G++L G
Sbjct: 189 KDSQGICFLGKIKYNEFIKYHLGEKKGNIIEKETGKIIGIHNGYWFFTVGQRRGIKLSNG 248
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PW+V+EKD++ N++++S N + +R F V + W + P
Sbjct: 249 PWFVIEKDLEKNIIYISHNENYLKQAKRKFLVHEIHWINDTP 290
[34][TOP]
>UniRef100_O51625 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Borrelia burgdorferi
RepID=MNMA_BORBU
Length = 355
Score = 122 bits (306), Expect = 1e-26
Identities = 48/102 (47%), Positives = 75/102 (73%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI+++EF+ H+GE++G I+E ETG +G H G+WF+T+GQR+G++L G
Sbjct: 189 KDSQGICFLGKIKYNEFIKYHLGEKKGNIIEKETGKIIGIHNGYWFFTVGQRRGIKLSNG 248
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PW+V+EKD++ N++++S N + +R F V + W + P
Sbjct: 249 PWFVIEKDLEKNIIYISHNENYLKQAKRKFLVHEIHWINDTP 290
[35][TOP]
>UniRef100_UPI00017F359E tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Borrelia burgdorferi 80a RepID=UPI00017F359E
Length = 355
Score = 121 bits (303), Expect = 3e-26
Identities = 47/102 (46%), Positives = 75/102 (73%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
+ SQGICFLGKI+++EF+ H+GE++G I+E ETG +G H G+WF+T+GQR+G++L G
Sbjct: 189 RDSQGICFLGKIKYNEFIKYHLGEKKGNIIEKETGKIIGIHNGYWFFTVGQRRGIKLSNG 248
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PW+V+EKD++ N++++S N + +R F V + W + P
Sbjct: 249 PWFVIEKDLEKNIIYISHNENYLKQAKRKFLVHEIHWINDTP 290
[36][TOP]
>UniRef100_C9KYC1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Bacteroides finegoldii DSM 17565 RepID=C9KYC1_9BACE
Length = 355
Score = 121 bits (303), Expect = 3e-26
Identities = 51/80 (63%), Positives = 67/80 (83%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +++FV R +GEREG+I+E ETG LG H G+WF+TIGQR+GL L GG
Sbjct: 186 KDSQGICFLGKINYNDFVRRFLGEREGVIVELETGKKLGTHHGYWFHTIGQRKGLGLSGG 245
Query: 275 PWYVVEKDVKNNVVFVSRNY 334
PW+VV+KD++ N+++VSR Y
Sbjct: 246 PWFVVKKDIQENIIYVSRGY 265
[37][TOP]
>UniRef100_B9ABJ0 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Borrelia burgdorferi 72a RepID=B9ABJ0_BORBU
Length = 355
Score = 121 bits (303), Expect = 3e-26
Identities = 48/102 (47%), Positives = 74/102 (72%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI+++EF+ H+GE++G I+E ETG +G H G+WF+T+GQR+G++L G
Sbjct: 189 KDSQGICFLGKIKYNEFIKYHLGEKKGNIIEKETGKIIGIHNGYWFFTVGQRRGIKLSNG 248
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PW+V+EKD+ N++++S N + +R F V + W + P
Sbjct: 249 PWFVIEKDLGKNIIYISHNENYLKQAKRKFLVHEIHWINDTP 290
[38][TOP]
>UniRef100_A5ZGZ8 Putative uncharacterized protein n=1 Tax=Bacteroides caccae ATCC
43185 RepID=A5ZGZ8_9BACE
Length = 354
Score = 121 bits (303), Expect = 3e-26
Identities = 50/80 (62%), Positives = 68/80 (85%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +++FV R +GE+EG+I+E ETG LG HRG+WF+TIGQR+GL L GG
Sbjct: 186 KDSQGICFLGKINYNDFVRRFLGEKEGMIIELETGKKLGTHRGYWFHTIGQRKGLGLSGG 245
Query: 275 PWYVVEKDVKNNVVFVSRNY 334
PW+V++KD++ N+++VSR Y
Sbjct: 246 PWFVIKKDIQENIIYVSRGY 265
[39][TOP]
>UniRef100_C0AMF6 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Borrelia sp. SV1 RepID=C0AMF6_9SPIO
Length = 355
Score = 120 bits (302), Expect = 4e-26
Identities = 48/102 (47%), Positives = 74/102 (72%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI+++EF+ H+GE++G I+E ETG +G H G+WF+T GQR+G++L G
Sbjct: 189 KDSQGICFLGKIKYNEFIKYHLGEKKGNIIEKETGKIIGIHNGYWFFTAGQRRGIKLSNG 248
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PW+V+EKD++ N++++S N + +R F V + W + P
Sbjct: 249 PWFVIEKDLEKNIIYISHNENYLKQAKRKFLVHEIHWINDTP 290
[40][TOP]
>UniRef100_B6YQX3 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2 RepID=B6YQX3_AZOPC
Length = 355
Score = 120 bits (301), Expect = 5e-26
Identities = 52/82 (63%), Positives = 67/82 (81%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +S F+ R++GE+ G I+E ETG LG H+G+WFYTIGQR+GL L GG
Sbjct: 187 KDSQGICFLGKINYSNFIRRYLGEKLGKIVELETGKILGNHKGYWFYTIGQRKGLYLSGG 246
Query: 275 PWYVVEKDVKNNVVFVSRNYFS 340
PW+V++KDV+ N+VFVS +Y S
Sbjct: 247 PWFVIKKDVQQNIVFVSNDYKS 268
[41][TOP]
>UniRef100_B3JLN4 Putative uncharacterized protein n=1 Tax=Bacteroides coprocola DSM
17136 RepID=B3JLN4_9BACE
Length = 378
Score = 120 bits (301), Expect = 5e-26
Identities = 52/102 (50%), Positives = 75/102 (73%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +++F+ R +GER+G I+E E+G +GKHRGFWF+TIGQR+GL L GG
Sbjct: 211 KDSQGICFLGKINYNDFIRRFLGERQGSIIELESGKEIGKHRGFWFHTIGQRKGLGLSGG 270
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PW+VV+KD +NN+++VS Y + + F++ + + P
Sbjct: 271 PWFVVDKDTENNILYVSHGYDTEQQYSNEFKLTDFHFITDNP 312
[42][TOP]
>UniRef100_C3QPU6 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Bacteroides sp. 2_2_4 RepID=C3QPU6_9BACE
Length = 355
Score = 119 bits (299), Expect = 8e-26
Identities = 51/80 (63%), Positives = 66/80 (82%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +++FV R +GE+EG I+E ETG LG HRG+WF+TIGQR+GL L GG
Sbjct: 186 KDSQGICFLGKINYNDFVRRFLGEKEGAIIELETGKKLGTHRGYWFHTIGQRKGLGLSGG 245
Query: 275 PWYVVEKDVKNNVVFVSRNY 334
PW+VV+KD++ N ++VSR Y
Sbjct: 246 PWFVVKKDIEENTIYVSRGY 265
[43][TOP]
>UniRef100_A7LTY6 Putative uncharacterized protein n=1 Tax=Bacteroides ovatus ATCC
8483 RepID=A7LTY6_BACOV
Length = 355
Score = 119 bits (299), Expect = 8e-26
Identities = 51/80 (63%), Positives = 66/80 (82%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +++FV R +GE+EG I+E ETG LG HRG+WF+TIGQR+GL L GG
Sbjct: 186 KDSQGICFLGKINYNDFVRRFLGEKEGAIIELETGKKLGTHRGYWFHTIGQRKGLGLSGG 245
Query: 275 PWYVVEKDVKNNVVFVSRNY 334
PW+VV+KD++ N ++VSR Y
Sbjct: 246 PWFVVKKDIEENTIYVSRGY 265
[44][TOP]
>UniRef100_UPI0001B4A466 tRNA methyl transferase n=1 Tax=Bacteroides sp. 2_1_33B
RepID=UPI0001B4A466
Length = 358
Score = 119 bits (297), Expect = 1e-25
Identities = 52/105 (49%), Positives = 76/105 (72%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +++F+ R++G+R G I+E ETG LGKH G+WF+TIGQR+GL L GG
Sbjct: 187 KDSQGICFLGKINYNDFIERYLGKRPGKIVELETGKVLGKHNGYWFHTIGQRKGLGLSGG 246
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPSP 409
PW+V++KD+K N+++VS Y D + +V +++ F + P
Sbjct: 247 PWFVIQKDIKRNIIYVSNGY---DPETQYGKVINMQGFDFITEDP 288
[45][TOP]
>UniRef100_C7X6B7 tRNA methyl transferase n=1 Tax=Parabacteroides sp. D13
RepID=C7X6B7_9PORP
Length = 358
Score = 119 bits (297), Expect = 1e-25
Identities = 52/105 (49%), Positives = 76/105 (72%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +++F+ R++G+R G I+E ETG LGKH G+WF+TIGQR+GL L GG
Sbjct: 187 KDSQGICFLGKINYNDFIERYLGKRPGKIVELETGKVLGKHNGYWFHTIGQRKGLGLSGG 246
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPSP 409
PW+V++KD+K N+++VS Y D + +V +++ F + P
Sbjct: 247 PWFVIQKDIKRNIIYVSNGY---DPETQYGKVINMQGFDFITEDP 288
[46][TOP]
>UniRef100_A6LIF1 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Parabacteroides
distasonis ATCC 8503 RepID=MNMA_PARD8
Length = 358
Score = 119 bits (297), Expect = 1e-25
Identities = 52/105 (49%), Positives = 76/105 (72%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +++F+ R++G+R G I+E ETG LGKH G+WF+TIGQR+GL L GG
Sbjct: 187 KDSQGICFLGKINYNDFIERYLGKRPGKIVELETGKVLGKHNGYWFHTIGQRKGLGLSGG 246
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPSP 409
PW+V++KD+K N+++VS Y D + +V +++ F + P
Sbjct: 247 PWFVIQKDIKRNIIYVSNGY---DPETQYGKVINMQGFDFITEDP 288
[47][TOP]
>UniRef100_Q8ABF5 tRNA-specific 2-thiouridylase mnmA 1 n=1 Tax=Bacteroides
thetaiotaomicron RepID=MNMA1_BACTN
Length = 355
Score = 119 bits (297), Expect = 1e-25
Identities = 50/80 (62%), Positives = 66/80 (82%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +++FV R +GEREG I+E ETG +G HRG+WF+TIGQR+GL L GG
Sbjct: 186 KDSQGICFLGKINYNDFVRRFLGEREGAIIELETGKKVGTHRGYWFHTIGQRKGLGLSGG 245
Query: 275 PWYVVEKDVKNNVVFVSRNY 334
PW+V++KDV+ N+++VS Y
Sbjct: 246 PWFVIKKDVEENIIYVSHGY 265
[48][TOP]
>UniRef100_B7G8R2 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B7G8R2_PHATR
Length = 368
Score = 99.8 bits (247), Expect(2) = 2e-25
Identities = 49/110 (44%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Frame = +2
Query: 101 SQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQG-------L 259
SQG+CFLGK++F EF+A ++G R G I++A TGD +G+H G W++T+GQR+G L
Sbjct: 191 SQGLCFLGKVKFDEFLAVYLGTRPGPIVDAGTGDVVGQHHGVWYHTVGQRKGIGRVLDPL 250
Query: 260 RLPGGPWYVVEKDVKNNVVFVSRNYFS--FDKRRRIFRVGSLKWFSGLPP 403
GPWYVV KD +VV+ S Y F R F V ++ W +G P
Sbjct: 251 ATSRGPWYVVAKDPGKDVVYCSNQYDEDIFTASRSEFAVENIHWIAGQAP 300
Score = 40.0 bits (92), Expect(2) = 2e-25
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL+R+LFP+G + K +VR LA +F LPN+ R D + F
Sbjct: 158 QLQRVLFPIGHLQKSQVRDLADEFILPNRLRPDSQGLCF 196
[49][TOP]
>UniRef100_UPI0001B4AA19 tRNA-specific 2-thiouridylase MnmA n=1 Tax=Bacteroides fragilis
3_1_12 RepID=UPI0001B4AA19
Length = 353
Score = 118 bits (296), Expect = 2e-25
Identities = 51/102 (50%), Positives = 75/102 (73%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +++FV R +GE+EG ++E ETG +G HRG+WF+TIGQR+GL L GG
Sbjct: 186 KDSQGICFLGKINYNDFVRRFLGEKEGAVIELETGKKIGTHRGYWFHTIGQRKGLGLGGG 245
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PW+VV+KD+++N+++VS Y + + FR+ + + P
Sbjct: 246 PWFVVKKDIQDNIIYVSHGYDADKQYGYEFRMKDFNFITSNP 287
[50][TOP]
>UniRef100_C6IQY3 tRNA-specific 2-thiouridylase mnmA 1 n=1 Tax=Bacteroides sp. 1_1_6
RepID=C6IQY3_9BACE
Length = 355
Score = 118 bits (296), Expect = 2e-25
Identities = 49/80 (61%), Positives = 66/80 (82%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +++FV R +GEREG I+E ETG +G HRG+WF+TIGQR+GL L GG
Sbjct: 186 KDSQGICFLGKINYNDFVRRFLGEREGAIIELETGKKVGTHRGYWFHTIGQRKGLGLSGG 245
Query: 275 PWYVVEKDVKNNVVFVSRNY 334
PW+V++KD++ N+++VS Y
Sbjct: 246 PWFVIKKDIEENIIYVSHGY 265
[51][TOP]
>UniRef100_B7BFU0 Putative uncharacterized protein n=1 Tax=Parabacteroides johnsonii
DSM 18315 RepID=B7BFU0_9PORP
Length = 358
Score = 118 bits (296), Expect = 2e-25
Identities = 49/80 (61%), Positives = 66/80 (82%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +++F+ R++G+R G I+E ETG LGKH G+WF+TIGQR+GL L GG
Sbjct: 187 KDSQGICFLGKINYNDFIERYLGKRTGKIVELETGKVLGKHNGYWFHTIGQRKGLGLSGG 246
Query: 275 PWYVVEKDVKNNVVFVSRNY 334
PW+V++KD+K NV++VS Y
Sbjct: 247 PWFVIKKDIKRNVIYVSNGY 266
[52][TOP]
>UniRef100_Q7MAW9 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Porphyromonas gingivalis
RepID=MNMA_PORGI
Length = 361
Score = 118 bits (296), Expect = 2e-25
Identities = 48/80 (60%), Positives = 68/80 (85%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +++F+ R++G++EG I+E ETG +G+H+G+WF+TIGQR+GL L GG
Sbjct: 187 KDSQGICFLGKIDYNDFIERYLGKKEGRIIELETGKVIGRHQGYWFHTIGQRKGLGLSGG 246
Query: 275 PWYVVEKDVKNNVVFVSRNY 334
PW+VV+KD+K N++ VSR Y
Sbjct: 247 PWFVVKKDIKRNIILVSRGY 266
[53][TOP]
>UniRef100_B2RHP0 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Porphyromonas gingivalis
ATCC 33277 RepID=MNMA_PORG3
Length = 361
Score = 118 bits (296), Expect = 2e-25
Identities = 48/80 (60%), Positives = 68/80 (85%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +++F+ R++G++EG I+E ETG +G+H+G+WF+TIGQR+GL L GG
Sbjct: 187 KDSQGICFLGKIDYNDFIERYLGKKEGRIIELETGKVIGRHQGYWFHTIGQRKGLGLSGG 246
Query: 275 PWYVVEKDVKNNVVFVSRNY 334
PW+VV+KD+K N++ VSR Y
Sbjct: 247 PWFVVKKDIKRNIILVSRGY 266
[54][TOP]
>UniRef100_C3QBG5 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Bacteroides sp. D1 RepID=C3QBG5_9BACE
Length = 355
Score = 118 bits (295), Expect = 2e-25
Identities = 50/80 (62%), Positives = 66/80 (82%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +++FV R +GE+EG I+E ETG +G HRG+WF+TIGQR+GL L GG
Sbjct: 186 KDSQGICFLGKINYNDFVRRFLGEKEGAIVELETGKKVGTHRGYWFHTIGQRKGLGLSGG 245
Query: 275 PWYVVEKDVKNNVVFVSRNY 334
PW+VV+KD++ N ++VSR Y
Sbjct: 246 PWFVVKKDIEENTIYVSRGY 265
[55][TOP]
>UniRef100_A7V188 Putative uncharacterized protein n=1 Tax=Bacteroides uniformis ATCC
8492 RepID=A7V188_BACUN
Length = 354
Score = 118 bits (295), Expect = 2e-25
Identities = 53/78 (67%), Positives = 66/78 (84%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
+ SQGICFLGKI +++FV R +GEREG I+E ETG LGKHRG+WF+TIGQR+GL L GG
Sbjct: 186 RDSQGICFLGKIDYNDFVRRFLGEREGDIVELETGRKLGKHRGYWFHTIGQRKGLGLGGG 245
Query: 275 PWYVVEKDVKNNVVFVSR 328
PW+VV KDV+ NV++VSR
Sbjct: 246 PWFVVRKDVEENVIYVSR 263
[56][TOP]
>UniRef100_A7AD79 Putative uncharacterized protein n=1 Tax=Parabacteroides merdae
ATCC 43184 RepID=A7AD79_9PORP
Length = 358
Score = 118 bits (295), Expect = 2e-25
Identities = 48/80 (60%), Positives = 66/80 (82%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +++F+ R++G+R G I+E ETG LGKH G+WF+TIGQR+GL L GG
Sbjct: 187 KDSQGICFLGKINYNDFIERYLGKRTGKIVELETGKVLGKHNGYWFHTIGQRKGLGLSGG 246
Query: 275 PWYVVEKDVKNNVVFVSRNY 334
PW+V++KD+K N+++VS Y
Sbjct: 247 PWFVIKKDIKRNIIYVSNGY 266
[57][TOP]
>UniRef100_Q64WG8 tRNA-specific 2-thiouridylase mnmA 2 n=1 Tax=Bacteroides fragilis
RepID=MNMA2_BACFR
Length = 353
Score = 118 bits (295), Expect = 2e-25
Identities = 51/102 (50%), Positives = 75/102 (73%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +++FV R +GE+EG ++E ETG +G HRG+WF+TIGQR+GL L GG
Sbjct: 186 KDSQGICFLGKINYNDFVRRFLGEKEGAVIEFETGKKIGTHRGYWFHTIGQRKGLGLGGG 245
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PW+VV+KD+++N+++VS Y + + FR+ + + P
Sbjct: 246 PWFVVKKDIQDNIIYVSHGYDAEQQYGYEFRMKDFNFITDNP 287
[58][TOP]
>UniRef100_Q5LFN5 tRNA-specific 2-thiouridylase mnmA 2 n=2 Tax=Bacteroides
RepID=MNMA2_BACFN
Length = 353
Score = 118 bits (295), Expect = 2e-25
Identities = 51/102 (50%), Positives = 75/102 (73%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +++FV R +GE+EG ++E ETG +G HRG+WF+TIGQR+GL L GG
Sbjct: 186 KDSQGICFLGKINYNDFVRRFLGEKEGAVIEFETGKKIGTHRGYWFHTIGQRKGLGLGGG 245
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PW+VV+KD+++N+++VS Y + + FR+ + + P
Sbjct: 246 PWFVVKKDIQDNIIYVSHGYDAEQQYGYEFRMKDFNFITDNP 287
[59][TOP]
>UniRef100_B5RQ24 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Borrelia recurrentis A1
RepID=MNMA_BORRA
Length = 354
Score = 117 bits (294), Expect = 3e-25
Identities = 50/111 (45%), Positives = 75/111 (67%)
Frame = +2
Query: 59 VGHQI*STE*G*KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYT 238
+ H+I K SQGICFLGKI+++EF+ H+GE +G I+E ETG LG H G+WF+T
Sbjct: 177 IAHEIDLPNKNRKDSQGICFLGKIKYNEFIKYHLGELKGNIIEQETGKILGTHNGYWFFT 236
Query: 239 IGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFS 391
IGQR+G++L GPW+V EKD++NN++++S + + + F V W +
Sbjct: 237 IGQRKGIKLSHGPWFVTEKDIQNNIIYISNSTNYLKQGKEQFLVHKTNWIN 287
[60][TOP]
>UniRef100_B5RMM8 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Borrelia duttonii Ly
RepID=MNMA_BORDL
Length = 354
Score = 117 bits (294), Expect = 3e-25
Identities = 50/111 (45%), Positives = 75/111 (67%)
Frame = +2
Query: 59 VGHQI*STE*G*KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYT 238
+ H+I K SQGICFLGKI+++EF+ H+GE +G I+E ETG LG H G+WF+T
Sbjct: 177 IAHEIDLPNKNRKDSQGICFLGKIKYNEFIKYHLGELKGNIIEQETGKILGTHNGYWFFT 236
Query: 239 IGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFS 391
IGQR+G++L GPW+V EKD++NN++++S + + + F V W +
Sbjct: 237 IGQRKGIKLSHGPWFVTEKDIQNNIIYISNSTNYLKQGKEQFLVHKTNWIN 287
[61][TOP]
>UniRef100_UPI000197B7E3 hypothetical protein BACCOPRO_03693 n=1 Tax=Bacteroides coprophilus
DSM 18228 RepID=UPI000197B7E3
Length = 385
Score = 117 bits (293), Expect = 4e-25
Identities = 53/102 (51%), Positives = 74/102 (72%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +++F+ R +GER G I+E E+G +G H+GFWF+TIGQR+GL L GG
Sbjct: 215 KDSQGICFLGKINYNDFIRRFLGERPGAIVELESGREIGTHKGFWFHTIGQRKGLGLSGG 274
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PW+VV+KD + N++FVSR Y + + R FR+ + + P
Sbjct: 275 PWFVVDKDPEKNLLFVSRGYDTVHQYGRKFRLTDFHFITENP 316
[62][TOP]
>UniRef100_UPI0001969EA4 hypothetical protein BACCELL_05284 n=1 Tax=Bacteroides
cellulosilyticus DSM 14838 RepID=UPI0001969EA4
Length = 353
Score = 117 bits (293), Expect = 4e-25
Identities = 53/102 (51%), Positives = 75/102 (73%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
+ SQGICFLGKI +++FV R +GER+G I+E ETG +G HRG+WF+TIGQR+GL L GG
Sbjct: 186 RDSQGICFLGKINYNDFVRRFLGERQGDIIELETGKKIGTHRGYWFHTIGQRKGLGLSGG 245
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PW+V+ KDV+ NV++VSR Y + + R F++ + + P
Sbjct: 246 PWFVIRKDVEANVLYVSRGYDTQWQYGREFKIHDFHFITENP 287
[63][TOP]
>UniRef100_B2S125 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Borrelia hermsii DAH
RepID=MNMA_BORHD
Length = 354
Score = 117 bits (292), Expect = 5e-25
Identities = 50/111 (45%), Positives = 74/111 (66%)
Frame = +2
Query: 59 VGHQI*STE*G*KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYT 238
+ H+I K SQGICFLGKI++ EF+ H+GE +G I+E ETG LG H G+WF+T
Sbjct: 177 IAHKIDLPNKNRKDSQGICFLGKIKYDEFIKYHLGELKGNIIEQETGKILGTHNGYWFFT 236
Query: 239 IGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFS 391
IGQR+G++L GPW+V EKD++NN++++S + + + F V W +
Sbjct: 237 IGQRKGIKLSHGPWFVTEKDIQNNIIYISNSVNYLAQGKHQFLVHKTNWIN 287
[64][TOP]
>UniRef100_C3RC45 tRNA-specific 2-thiouridylase mnmA 1 n=1 Tax=Bacteroides sp. D4
RepID=C3RC45_9BACE
Length = 354
Score = 116 bits (291), Expect = 7e-25
Identities = 47/80 (58%), Positives = 65/80 (81%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +++F+ R +GE+EG I+E ETG +G H+G+WF+TIGQR+GL L GG
Sbjct: 186 KDSQGICFLGKINYNDFLRRFLGEKEGAIIEMETGKRIGTHKGYWFHTIGQRKGLGLSGG 245
Query: 275 PWYVVEKDVKNNVVFVSRNY 334
PW+V+ KD+ N+++VSR Y
Sbjct: 246 PWFVIRKDINENIIYVSRGY 265
[65][TOP]
>UniRef100_C3Q7Z7 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Bacteroides sp. 9_1_42FAA RepID=C3Q7Z7_9BACE
Length = 354
Score = 116 bits (291), Expect = 7e-25
Identities = 47/80 (58%), Positives = 65/80 (81%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +++F+ R +GE+EG I+E ETG +G H+G+WF+TIGQR+GL L GG
Sbjct: 186 KDSQGICFLGKINYNDFLRRFLGEKEGAIIEMETGKRIGTHKGYWFHTIGQRKGLGLSGG 245
Query: 275 PWYVVEKDVKNNVVFVSRNY 334
PW+V+ KD+ N+++VSR Y
Sbjct: 246 PWFVIRKDINENIIYVSRGY 265
[66][TOP]
>UniRef100_C3J919 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=2
Tax=Bacteria RepID=C3J919_9PORP
Length = 383
Score = 116 bits (291), Expect = 7e-25
Identities = 50/80 (62%), Positives = 65/80 (81%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +++F+ R++G+R G I+E ETG LG H+GFWF+TIGQR+GL L GG
Sbjct: 205 KDSQGICFLGKINYNDFIERYLGKRPGRIIEYETGKTLGTHQGFWFHTIGQRKGLGLSGG 264
Query: 275 PWYVVEKDVKNNVVFVSRNY 334
PW+VV+KD K N++ VSR Y
Sbjct: 265 PWFVVKKDCKRNIILVSRGY 284
[67][TOP]
>UniRef100_B7AHW6 Putative uncharacterized protein n=1 Tax=Bacteroides eggerthii DSM
20697 RepID=B7AHW6_9BACE
Length = 365
Score = 116 bits (291), Expect = 7e-25
Identities = 50/80 (62%), Positives = 64/80 (80%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
+ SQGICFLG+I +++FV R +GE+EG I+E ETG LG HRG+WF+TIGQR+GL L GG
Sbjct: 186 RDSQGICFLGRINYNDFVRRFLGEKEGRIIELETGKILGTHRGYWFHTIGQRKGLGLGGG 245
Query: 275 PWYVVEKDVKNNVVFVSRNY 334
PW+VV KD NV++VSR Y
Sbjct: 246 PWFVVRKDTDENVIYVSRGY 265
[68][TOP]
>UniRef100_B6VS01 Putative uncharacterized protein n=1 Tax=Bacteroides dorei DSM
17855 RepID=B6VS01_9BACE
Length = 354
Score = 116 bits (290), Expect = 9e-25
Identities = 47/80 (58%), Positives = 65/80 (81%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +++F+ R +GE+EG I+E ETG +G H+G+WF+TIGQR+GL L GG
Sbjct: 186 KDSQGICFLGKINYNDFLRRFLGEKEGAIIEMETGKRIGTHKGYWFHTIGQRKGLGLSGG 245
Query: 275 PWYVVEKDVKNNVVFVSRNY 334
PW+V+ KD+ N+++VSR Y
Sbjct: 246 PWFVIRKDIDENIIYVSRGY 265
[69][TOP]
>UniRef100_B5CYI2 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM
17135 RepID=B5CYI2_9BACE
Length = 368
Score = 115 bits (287), Expect = 2e-24
Identities = 47/80 (58%), Positives = 66/80 (82%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +++F+ R +GER G ++E ETG +G+HRG+WF+TIGQR+GL L GG
Sbjct: 198 KDSQGICFLGKINYNDFIRRFLGERPGPVVELETGKVIGQHRGYWFHTIGQRKGLGLGGG 257
Query: 275 PWYVVEKDVKNNVVFVSRNY 334
PW+VV+K+V+ N+++VS Y
Sbjct: 258 PWFVVDKNVEENIIYVSHGY 277
[70][TOP]
>UniRef100_B3CHD7 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis
DSM 17393 RepID=B3CHD7_9BACE
Length = 353
Score = 114 bits (286), Expect = 3e-24
Identities = 52/102 (50%), Positives = 74/102 (72%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
+ SQGICFLGKI +++FV +GEREG I+E E+G +G HRG+WF+TIGQR+GL L GG
Sbjct: 186 RDSQGICFLGKINYNDFVRHFLGEREGDIVEWESGKKIGTHRGYWFHTIGQRKGLGLSGG 245
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PW+V+ KD++ NV++VSR Y + + R FR+ + + P
Sbjct: 246 PWFVIRKDIEENVLYVSRGYDTQWQYGREFRMHDFHFITENP 287
[71][TOP]
>UniRef100_B0NQR1 Putative uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC
43183 RepID=B0NQR1_BACSE
Length = 365
Score = 114 bits (286), Expect = 3e-24
Identities = 49/80 (61%), Positives = 63/80 (78%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
+ SQGICFLG+I +++FV R +GE+EG I+E ETG LG HRG+WF+TIGQR+GL L GG
Sbjct: 186 RDSQGICFLGRINYNDFVRRFLGEKEGRIVELETGKILGTHRGYWFHTIGQRKGLGLSGG 245
Query: 275 PWYVVEKDVKNNVVFVSRNY 334
PW+VV KD NV++VS Y
Sbjct: 246 PWFVVRKDTDENVIYVSHGY 265
[72][TOP]
>UniRef100_C2MCP2 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Porphyromonas uenonis 60-3 RepID=C2MCP2_9PORP
Length = 376
Score = 114 bits (285), Expect = 3e-24
Identities = 50/102 (49%), Positives = 73/102 (71%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLG+I +++F+ R++G + G I++ ETG+ +G+HRG+WF+TIGQR+GL L GG
Sbjct: 201 KDSQGICFLGQIDYNDFIERYLGTQTGDIIDHETGEKIGEHRGYWFHTIGQRKGLGLSGG 260
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
PWYVV KDV++NV++ SR Y + I + W + P
Sbjct: 261 PWYVVAKDVEHNVLYASRGYDPKTQYGTIIETEEMHWLTTDP 302
[73][TOP]
>UniRef100_A6DKA8 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Lentisphaera araneosa HTCC2155 RepID=A6DKA8_9BACT
Length = 353
Score = 114 bits (285), Expect = 3e-24
Identities = 53/103 (51%), Positives = 71/103 (68%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI + +FV H+GE++G I+E ET + G+H+G WF+TIGQR GL L GG
Sbjct: 190 KDSQGICFLGKISYPDFVRFHLGEKQGDIIEIETDEKKGEHKGVWFHTIGQRSGLGLSGG 249
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPP 403
PWYVV+KD+ N+V++S D+ R V ++ W SG P
Sbjct: 250 PWYVVKKDLATNIVYISHKNGLEDQLRDEVTVNTVHWTSGKFP 292
[74][TOP]
>UniRef100_A6KXF7 tRNA-specific 2-thiouridylase mnmA 1 n=2 Tax=Bacteroides
RepID=MNMA1_BACV8
Length = 354
Score = 114 bits (285), Expect = 3e-24
Identities = 47/80 (58%), Positives = 64/80 (80%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI ++EF+ R +GE+EG I+E ETG +G H+G+WF+TIGQR+GL L GG
Sbjct: 186 KDSQGICFLGKINYNEFLRRFLGEKEGDIIEMETGKRIGTHKGYWFHTIGQRKGLGLGGG 245
Query: 275 PWYVVEKDVKNNVVFVSRNY 334
PW+V+ KD+ N+++VS Y
Sbjct: 246 PWFVIRKDIDENIIYVSHGY 265
[75][TOP]
>UniRef100_UPI000192E86A hypothetical protein PREVCOP_00011 n=1 Tax=Prevotella copri DSM
18205 RepID=UPI000192E86A
Length = 360
Score = 110 bits (276), Expect = 4e-23
Identities = 43/80 (53%), Positives = 66/80 (82%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLG+I +++++ R++GE+ G ++E ETG +G+H+G WF+TIGQR+GL GG
Sbjct: 196 KDSQGICFLGQINYNDYIRRYLGEKPGDVIEMETGKRIGEHKGLWFHTIGQRKGLGFGGG 255
Query: 275 PWYVVEKDVKNNVVFVSRNY 334
PW+V++KDV+NN+++VS Y
Sbjct: 256 PWFVIKKDVENNILYVSHGY 275
[76][TOP]
>UniRef100_C9MMJ3 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Prevotella veroralis F0319 RepID=C9MMJ3_9BACT
Length = 360
Score = 110 bits (276), Expect = 4e-23
Identities = 48/80 (60%), Positives = 64/80 (80%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLG I ++E+V R++GE+ G I+E ETG +G+HRG WF+TIGQR+GL L GG
Sbjct: 194 KDSQGICFLGNIDYNEYVRRYLGEQVGDIIELETGKKIGEHRGLWFHTIGQRKGLGLGGG 253
Query: 275 PWYVVEKDVKNNVVFVSRNY 334
PW+VV+KDV N+++VS Y
Sbjct: 254 PWFVVKKDVAQNILYVSHGY 273
[77][TOP]
>UniRef100_C9Q1C2 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Prevotella sp. oral taxon 472 str. F0295
RepID=C9Q1C2_9BACT
Length = 358
Score = 108 bits (270), Expect = 2e-22
Identities = 49/95 (51%), Positives = 66/95 (69%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLGKI +++++ R +GE G +LE E+ +G HRG WF+TIGQR GL GG
Sbjct: 194 KDSQGICFLGKINYNDYIRRFLGENPGEVLELESEKKIGMHRGLWFHTIGQRHGLGFGGG 253
Query: 275 PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSL 379
PWY V+KDV+ NV+FVS+ Y ++ F+V L
Sbjct: 254 PWYAVKKDVERNVLFVSKGYEPATAYKKGFKVHDL 288
[78][TOP]
>UniRef100_C5VKP2 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Prevotella melaninogenica ATCC 25845
RepID=C5VKP2_9BACT
Length = 360
Score = 108 bits (269), Expect = 2e-22
Identities = 45/80 (56%), Positives = 63/80 (78%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICFLG I ++E+V R++GE G ++E ETG +G+H+G WF+TIGQR+GL L GG
Sbjct: 194 KDSQGICFLGNIDYNEYVRRYLGEEIGDVIELETGKKIGEHKGLWFHTIGQRKGLGLGGG 253
Query: 275 PWYVVEKDVKNNVVFVSRNY 334
PW+V++KDV N+++VS Y
Sbjct: 254 PWFVIKKDVTKNILYVSHGY 273
[79][TOP]
>UniRef100_B8CCP6 tRNA-methyltransferase (Fragment) n=1 Tax=Thalassiosira pseudonana
CCMP1335 RepID=B8CCP6_THAPS
Length = 392
Score = 103 bits (257), Expect = 6e-21
Identities = 47/110 (42%), Positives = 71/110 (64%), Gaps = 9/110 (8%)
Frame = +2
Query: 101 SQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQG-------L 259
SQG+CFLGK+RF +F+A ++G+R G +++A GD +G+H G W++T+GQR+G L
Sbjct: 209 SQGLCFLGKVRFDDFLASYLGDRPGDVVDALNGDVIGRHNGLWYHTVGQRKGIGKVMFPL 268
Query: 260 RLPGGPWYVVEKDVKNNVVFVSRNY--FSFDKRRRIFRVGSLKWFSGLPP 403
GPWYVV KD + ++V+VS Y F + R F V ++W +G P
Sbjct: 269 ATAKGPWYVVAKDQERDIVYVSNRYDEDDFAQARSEFEVEDVRWLAGEAP 318
[80][TOP]
>UniRef100_C8P087 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Erysipelothrix rhusiopathiae ATCC 19414
RepID=C8P087_ERYRH
Length = 372
Score = 77.4 bits (189), Expect(2) = 1e-19
Identities = 35/80 (43%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ ++ +F+ ++ + EG I++ +T LGKH+G FYTIGQR GL +
Sbjct: 193 KDSTGICFIGERQYRDFLKNYLKDVEGDIIDVDTQKVLGKHQGVMFYTIGQRHGLDISTA 252
Query: 272 -GPWYVVEKDVKNNVVFVSR 328
GPW+VV KD+ N ++V +
Sbjct: 253 VGPWFVVGKDLSTNRIYVGK 272
Score = 42.4 bits (98), Expect(2) = 1e-19
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +3
Query: 6 LKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
L R+LFPLG + KDEVRR+A + DLP +KD F
Sbjct: 163 LPRVLFPLGSLTKDEVRRIALELDLPVATKKDSTGICF 200
[81][TOP]
>UniRef100_B7RUZ2 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=marine gamma proteobacterium HTCC2148
RepID=B7RUZ2_9GAMM
Length = 363
Score = 84.7 bits (208), Expect(2) = 1e-19
Identities = 44/109 (40%), Positives = 67/109 (61%), Gaps = 6/109 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ RFS+F+ +++ + G I+ + G+ LG+H+G ++TIGQRQGL + G
Sbjct: 193 KDSTGICFIGERRFSDFLQQYLPAQPGDIVSLD-GEHLGQHQGLMYHTIGQRQGLGIGGL 251
Query: 272 -----GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPP 403
PWYVVEKD+ NNV+ V++ + G + W +G PP
Sbjct: 252 ANHTDDPWYVVEKDLDNNVLLVAQGNDHPALFKSSLVTGEVFWVAGAPP 300
Score = 35.0 bits (79), Expect(2) = 1e-19
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
+L + LFP+G I K EVR LA ++DL +KD F
Sbjct: 162 ELAKTLFPVGDIEKPEVRSLAEEYDLATAKKKDSTGICF 200
[82][TOP]
>UniRef100_B9ZR10 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Thioalkalivibrio sp. K90mix RepID=B9ZR10_9GAMM
Length = 373
Score = 74.3 bits (181), Expect(2) = 2e-18
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 6/85 (7%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--- 265
K S GICF+G+ RF +F+A+++ EG + E G +G H+G FYT+GQRQGL +
Sbjct: 191 KDSTGICFIGERRFRDFLAQYLRAPEGEMCTPE-GQVVGHHQGLMFYTLGQRQGLGIGGI 249
Query: 266 ---PGGPWYVVEKDVKNNVVFVSRN 331
P PWYVV+KD+ +N + V+++
Sbjct: 250 DGFPEAPWYVVDKDLGSNRLIVAQD 274
Score = 41.6 bits (96), Expect(2) = 2e-18
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL+ LFPLG IPKD+VR A + LPN RKD F
Sbjct: 160 QLRPALFPLGDIPKDQVRARARELGLPNHARKDSTGICF 198
[83][TOP]
>UniRef100_Q2Y6T6 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Nitrosospira multiformis
ATCC 25196 RepID=MNMA_NITMU
Length = 363
Score = 81.6 bits (200), Expect(2) = 2e-18
Identities = 46/109 (42%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--- 265
K S GICF+G+ F EF+ R++ G I +GD +G+H G +YTIGQRQGL +
Sbjct: 190 KDSTGICFIGERPFREFLNRYLPNDPGEI-RTPSGDVMGRHAGLMYYTIGQRQGLGIGGT 248
Query: 266 ---PGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPP 403
G PW+V EKDVK NV+ V + + D R L W SG P
Sbjct: 249 RGGDGEPWFVSEKDVKRNVLTVVQGHDHPDLLRPALAATDLTWVSGKMP 297
Score = 34.3 bits (77), Expect(2) = 2e-18
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL R LFP+G + K +VR +A LPN +KD F
Sbjct: 159 QLSRALFPIGHLYKRDVRSIAKDHGLPNFSKKDSTGICF 197
[84][TOP]
>UniRef100_Q2SJL8 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Hahella chejuensis KCTC
2396 RepID=MNMA_HAHCH
Length = 364
Score = 79.3 bits (194), Expect(2) = 2e-18
Identities = 43/112 (38%), Positives = 67/112 (59%), Gaps = 10/112 (8%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +FS+F+ ++ + G I+ + G+ +G+H+G ++TIGQRQGL + G
Sbjct: 193 KDSTGICFIGERKFSDFLKTYLPAQPGKIV-TDKGEEIGRHQGLMYHTIGQRQGLGIGGL 251
Query: 272 -----GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVG----SLKWFSGLP 400
PWYVVEKD+ NN + V++ R+F G L W +G+P
Sbjct: 252 KGYDDAPWYVVEKDLDNNELVVAQG----GDHPRLFSAGLTASKLDWINGVP 299
Score = 36.2 bits (82), Expect(2) = 2e-18
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 6 LKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
L R LFP+G + K EVRR+A + DL D+KD F
Sbjct: 163 LARTLFPVGGLLKKEVRRIARELDLITHDKKDSTGICF 200
[85][TOP]
>UniRef100_C8QMD4 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Dickeya dadantii Ech586 RepID=C8QMD4_DICDA
Length = 372
Score = 82.0 bits (201), Expect(2) = 3e-18
Identities = 43/114 (37%), Positives = 69/114 (60%), Gaps = 10/114 (8%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F +F+AR++ + G IL + G +G+H+G ++T+GQR+GL + G
Sbjct: 196 KDSTGICFIGERKFRDFLARYLPAQPGPILSVDDGKVMGEHQGLMYHTLGQRKGLGIGGV 255
Query: 272 -----GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVG----SLKWFSGLPPS 406
PWYVV+KDV +NV++V++ + + R+ VG L W P S
Sbjct: 256 KEGGDDPWYVVDKDVASNVLYVAQGH----EHPRLMSVGLIAQQLHWVDREPLS 305
Score = 33.1 bits (74), Expect(2) = 3e-18
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + LFP+G + K EVR++A + DL +KD F
Sbjct: 165 QLAQSLFPVGELEKPEVRKIAEQLDLATARKKDSTGICF 203
[86][TOP]
>UniRef100_Q92BK1 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Listeria innocua
RepID=MNMA_LISIN
Length = 371
Score = 77.0 bits (188), Expect(2) = 3e-18
Identities = 37/82 (45%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--P 268
K S GICF+G+ F +F++ ++ + G + G+ LGKH G +YTIGQR GL +
Sbjct: 194 KDSTGICFIGERNFKQFLSEYLPAQPGD-MRTLNGEVLGKHDGLMYYTIGQRHGLGIGGD 252
Query: 269 GGPWYVVEKDVKNNVVFVSRNY 334
G PW+VV KD+KNNV+FV + +
Sbjct: 253 GEPWFVVGKDLKNNVLFVEQGF 274
Score = 38.1 bits (87), Expect(2) = 3e-18
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QLK+++FPLG + K EVR +ATK L ++KD F
Sbjct: 163 QLKKVMFPLGGMEKTEVREIATKAGLATANKKDSTGICF 201
[87][TOP]
>UniRef100_C6C6V7 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Dickeya dadantii Ech703 RepID=C6C6V7_DICDC
Length = 370
Score = 82.8 bits (203), Expect(2) = 3e-18
Identities = 35/86 (40%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F +F+AR++ + G I+ + G +G+H+G ++T+GQR+GL + G
Sbjct: 194 KDSTGICFIGERKFRDFLARYLPAQPGAIISVDDGKTMGEHQGLMYHTLGQRKGLGIGGV 253
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV NN+++V++ +
Sbjct: 254 RDGGDDPWYVVDKDVANNILYVAQGH 279
Score = 32.3 bits (72), Expect(2) = 3e-18
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K +VRR+A + DL +KD F
Sbjct: 163 QVAQSLFPVGELEKPQVRRIAEELDLATAKKKDSTGICF 201
[88][TOP]
>UniRef100_Q0ADM9 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Nitrosomonas eutropha
C91 RepID=MNMA_NITEC
Length = 361
Score = 76.3 bits (186), Expect(2) = 4e-18
Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ F EF+ R++ G I + G +G+H+G +YTIGQRQGL + G
Sbjct: 190 KDSTGICFIGERPFREFLNRYLPVDPGEIHTLD-GQIVGEHQGLMYYTIGQRQGLGIGGI 248
Query: 272 -----GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPP 403
PW+V KD++ NV++V + + R L W SG PP
Sbjct: 249 REGSEQPWFVSGKDMQTNVLYVVQGHDHPALLRSSLTAADLSWISGAPP 297
Score = 38.5 bits (88), Expect(2) = 4e-18
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL R +FP+G + K EVR++A K LPN +KD F
Sbjct: 159 QLSRTIFPIGHLYKREVRKIAHKHGLPNSTKKDSTGICF 197
[89][TOP]
>UniRef100_A4G213 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Herminiimonas
arsenicoxydans RepID=MNMA_HERAR
Length = 372
Score = 74.7 bits (182), Expect(2) = 5e-18
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ F EF+ R++ + G ++ G +G+H G FYT+GQR+G+ L G
Sbjct: 195 KDSTGICFIGERPFREFLNRYLSYQPGP-MKTPDGTIVGEHVGLSFYTLGQRKGIGLGGM 253
Query: 272 ----------GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
GPWYV KDV NN +++ + + G + W +G PS
Sbjct: 254 KTHKNTDGNSGPWYVARKDVANNTLYIVQGHDHPWLLSSALSAGQMSWVAGRAPS 308
Score = 39.7 bits (91), Expect(2) = 5e-18
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + LFPLG I K EVR++A + LPN +KD F
Sbjct: 164 QLSKTLFPLGEIRKTEVRKIAEQLQLPNASKKDSTGICF 202
[90][TOP]
>UniRef100_C4UHY7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Yersinia ruckeri ATCC
29473 RepID=C4UHY7_YERRU
Length = 371
Score = 80.5 bits (197), Expect(2) = 7e-18
Identities = 38/86 (44%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F +F+AR++ + G IL + G +LG+H+G ++T+GQR+GL + G
Sbjct: 194 KDSTGICFIGERKFRDFLARYLPAQPGQILSVD-GQYLGEHQGLMYHTLGQRKGLGIGGT 252
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV NNV+ V++ +
Sbjct: 253 KEGGDDPWYVVDKDVANNVLVVAQGH 278
Score = 33.5 bits (75), Expect(2) = 7e-18
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + LFP+G + K EVRR+A DL +KD F
Sbjct: 163 QLAQSLFPVGELEKPEVRRIAETLDLVTAKKKDSTGICF 201
[91][TOP]
>UniRef100_A3NZ55 tRNA-specific 2-thiouridylase mnmA n=7 Tax=Burkholderia
pseudomallei RepID=MNMA_BURP0
Length = 383
Score = 74.3 bits (181), Expect(2) = 9e-18
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +GKH G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTPDGKTVGKHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + R R G++ W +G PP+
Sbjct: 249 KDGSGEPWFVAAKDIASNTLYVVQGHDHPWLRSRELVAGNVSWVAGEPPA 298
Score = 39.3 bits (90), Expect(2) = 9e-18
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG IPK VR +A + LPN +KD F
Sbjct: 159 QLSKTMFPLGEIPKTRVREIAAQIGLPNAKKKDSTGICF 197
[92][TOP]
>UniRef100_UPI00016ACE63 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Burkholderia pseudomallei B7210 RepID=UPI00016ACE63
Length = 373
Score = 74.3 bits (181), Expect(2) = 9e-18
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +GKH G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTPDGKTVGKHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + R R G++ W +G PP+
Sbjct: 249 KDGSGEPWFVAAKDIASNTLYVVQGHDHPWLRSRELVAGNVSWVAGEPPA 298
Score = 39.3 bits (90), Expect(2) = 9e-18
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG IPK VR +A + LPN +KD F
Sbjct: 159 QLSKTMFPLGEIPKTRVREIAAQIGLPNAKKKDSTGICF 197
[93][TOP]
>UniRef100_Q8Y714 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Listeria monocytogenes
RepID=MNMA_LISMO
Length = 371
Score = 74.7 bits (182), Expect(2) = 9e-18
Identities = 36/82 (43%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--P 268
K S GICF+G+ F +F++ ++ + G + + G+ LGKH G +YTIGQR GL +
Sbjct: 194 KDSTGICFIGERNFKQFLSEYLPAQPGEMRTLD-GEVLGKHDGLMYYTIGQRHGLGIGGD 252
Query: 269 GGPWYVVEKDVKNNVVFVSRNY 334
G PW+VV KD+K NV+FV + +
Sbjct: 253 GEPWFVVGKDLKENVLFVEQGF 274
Score = 38.9 bits (89), Expect(2) = 9e-18
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QLK+++FPLG + K EVR +A K L D+KD F
Sbjct: 163 QLKKVMFPLGAMEKTEVREIAKKAGLATADKKDSTGICF 201
[94][TOP]
>UniRef100_A1WEN1 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Verminephrobacter
eiseniae EF01-2 RepID=MNMA_VEREI
Length = 370
Score = 72.0 bits (175), Expect(2) = 9e-18
Identities = 42/118 (35%), Positives = 58/118 (49%), Gaps = 13/118 (11%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ F EF+ R+IG G I E + G LG+H G FYT+GQRQGL + G
Sbjct: 195 KDSTGICFIGERPFREFLNRYIGPAPGPI-EDDRGRVLGQHSGLSFYTLGQRQGLGIGGL 253
Query: 272 ------------GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPSP 409
PW+V K++ N + V + + R +W G P+P
Sbjct: 254 KEQGAQRGGGAHAPWFVARKELATNTLRVVQGHDHPWLLSRALEAQDARWICGAAPAP 311
Score = 41.6 bits (96), Expect(2) = 9e-18
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL R LFPLG + K EVRRLA LPN +KD F
Sbjct: 164 QLSRTLFPLGALRKTEVRRLAEDIGLPNARKKDSTGICF 202
[95][TOP]
>UniRef100_C0B0W6 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198
RepID=C0B0W6_9ENTR
Length = 367
Score = 79.7 bits (195), Expect(2) = 9e-18
Identities = 41/112 (36%), Positives = 71/112 (63%), Gaps = 10/112 (8%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F++F++R++ + G I+ + G+ +G+H+G ++T+GQR+GL + G
Sbjct: 194 KDSTGICFIGERKFTDFLSRYLPAKPGPIITVD-GETIGEHQGLMYHTLGQRKGLGIGGT 252
Query: 272 -----GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVG----SLKWFSGLP 400
PWYVV+KDV+NN++ V++ + + R+ VG L W S P
Sbjct: 253 KDGGDDPWYVVDKDVENNILIVAQGH----EHPRLMSVGLIAQQLHWVSREP 300
Score = 33.9 bits (76), Expect(2) = 9e-18
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K EVR++A K DL +KD F
Sbjct: 163 QIAQSLFPVGEMEKPEVRKIAEKLDLATAKKKDSTGICF 201
[96][TOP]
>UniRef100_Q2SZ45 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Burkholderia
thailandensis E264 RepID=MNMA_BURTA
Length = 386
Score = 73.6 bits (179), Expect(2) = 1e-17
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTQPGP-MKTPDGKTVGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + R R G++ W +G PPS
Sbjct: 249 KDGSGEPWFVAAKDIASNTLYVVQGHDHPWLRSRELVAGNVSWVAGEPPS 298
Score = 39.7 bits (91), Expect(2) = 1e-17
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG IPK +VR +A + LPN +KD F
Sbjct: 159 QLSKTMFPLGEIPKTKVREIAAQIGLPNAKKKDSTGICF 197
[97][TOP]
>UniRef100_C5CJ50 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Variovorax paradoxus S110 RepID=C5CJ50_VARPS
Length = 369
Score = 75.1 bits (183), Expect(2) = 1e-17
Identities = 43/118 (36%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ F EF+ R+I + G I + + G LG+H+G FYT+GQRQGL + G
Sbjct: 192 KDSTGICFIGERPFREFLNRYISKEPGPIKD-DRGRKLGEHQGLSFYTLGQRQGLGIGGV 250
Query: 272 ------------GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPSP 409
PW+V KDV+ N ++V + + G W SG P+P
Sbjct: 251 KEKGAQRGSGDHSPWFVARKDVEKNTLWVVQGHDHPWLLSSALAAGDASWVSGEAPAP 308
Score = 38.1 bits (87), Expect(2) = 1e-17
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + LFP+G + K EVRR+A + LPN +KD F
Sbjct: 161 QLSKTLFPVGELHKTEVRRIAEEIGLPNAKKKDSTGICF 199
[98][TOP]
>UniRef100_A3YG87 TRNA methyltransferase n=1 Tax=Marinomonas sp. MED121
RepID=A3YG87_9GAMM
Length = 377
Score = 79.0 bits (193), Expect(2) = 2e-17
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 6/109 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ RF +F+ +++ + G I E GD +G+H G ++TIGQRQGL + G
Sbjct: 204 KDSTGICFIGERRFKDFLEQYLPAQPGDIKTLE-GDTIGRHSGLMYHTIGQRQGLGIGGL 262
Query: 272 -----GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPP 403
PWYVVEKD+ NNV+ V+++ + ++ W + + P
Sbjct: 263 ANYSDEPWYVVEKDLDNNVLLVTQSSDDKPLYKTHLNASNMDWVARVAP 311
Score = 33.5 bits (75), Expect(2) = 2e-17
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
++ + LFP+G + K EVRRLA + DL ++KD F
Sbjct: 173 EIAKSLFPVGELEKPEVRRLAQEHDLITHNKKDSTGICF 211
[99][TOP]
>UniRef100_UPI0001789869 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789869
Length = 375
Score = 77.4 bits (189), Expect(2) = 2e-17
Identities = 32/80 (40%), Positives = 54/80 (67%), Gaps = 4/80 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S G+CF+G+ F EF+ +++ + G +++ TG+ G+H G +YT+GQRQGL + G
Sbjct: 200 KDSTGVCFIGERNFKEFLGQYLPAQSGDMVDIVTGEVKGRHDGLMYYTLGQRQGLGIGGS 259
Query: 275 ----PWYVVEKDVKNNVVFV 322
PW+V +KD+ NN+++V
Sbjct: 260 GSGEPWFVADKDLTNNILYV 279
Score = 35.0 bits (79), Expect(2) = 2e-17
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FP+G +PK EVRRLA + L +KD F
Sbjct: 169 QLAKAMFPIGHLPKPEVRRLAEEAGLYTAKKKDSTGVCF 207
[100][TOP]
>UniRef100_Q492R5 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Candidatus Blochmannia
pennsylvanicus str. BPEN RepID=MNMA_BLOPB
Length = 367
Score = 78.6 bits (192), Expect(2) = 2e-17
Identities = 35/84 (41%), Positives = 57/84 (67%), Gaps = 6/84 (7%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--- 265
K S GICF+GK +F +F++++I R G+I++ G+ +G H+G FYT+GQR+GL++
Sbjct: 194 KDSTGICFIGKRKFKDFISKYIPIRPGVIIDI-NGNTIGAHQGVSFYTLGQRKGLKIGGV 252
Query: 266 ---PGGPWYVVEKDVKNNVVFVSR 328
G PWYV++KD NN + ++
Sbjct: 253 KQGNGQPWYVIDKDTSNNTLIAAQ 276
Score = 33.9 bits (76), Expect(2) = 2e-17
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QLK+ LFP+G + K +VR +A K +L ++KD F
Sbjct: 163 QLKQCLFPVGTLNKFQVRNIAKKLNLITANKKDSTGICF 201
[101][TOP]
>UniRef100_UPI00016AE6D5 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Burkholderia thailandensis MSMB43
RepID=UPI00016AE6D5
Length = 311
Score = 72.8 bits (177), Expect(2) = 2e-17
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 181 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTPDGKTVGEHIGLAFYTFGQRKGIGLGGS 239
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + R R G++ W +G PP+
Sbjct: 240 KDGSGEPWFVAAKDIASNTLYVVQGHDHPWLRSRELVAGNVSWVAGEPPA 289
Score = 39.7 bits (91), Expect(2) = 2e-17
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG IPK +VR +A + LPN +KD F
Sbjct: 150 QLSKTMFPLGEIPKTKVREIAAQIGLPNAKKKDSTGICF 188
[102][TOP]
>UniRef100_UPI00016AA319 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Burkholderia thailandensis Bt4 RepID=UPI00016AA319
Length = 386
Score = 72.4 bits (176), Expect(2) = 3e-17
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTQPGP-MKTPDGKTVGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + R R G++ W +G PP+
Sbjct: 249 KDGSGEPWFVAAKDIASNTLYVVQGHDHPWLRSRELVAGNVSWVAGEPPA 298
Score = 39.7 bits (91), Expect(2) = 3e-17
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG IPK +VR +A + LPN +KD F
Sbjct: 159 QLSKTMFPLGEIPKTKVREIAAQIGLPNAKKKDSTGICF 197
[103][TOP]
>UniRef100_UPI00016A3547 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Burkholderia thailandensis TXDOH RepID=UPI00016A3547
Length = 386
Score = 72.4 bits (176), Expect(2) = 3e-17
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTQPGP-MKTPDGKTVGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + R R G++ W +G PP+
Sbjct: 249 KDGSGEPWFVAAKDIASNTLYVVQGHDHPWLRSRELVAGNVSWVAGEPPA 298
Score = 39.7 bits (91), Expect(2) = 3e-17
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG IPK +VR +A + LPN +KD F
Sbjct: 159 QLSKTMFPLGEIPKTKVREIAAQIGLPNAKKKDSTGICF 197
[104][TOP]
>UniRef100_C4KUM7 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=2
Tax=Burkholderia pseudomallei RepID=C4KUM7_BURPS
Length = 383
Score = 72.8 bits (177), Expect(2) = 3e-17
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTPDGKTVGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + R R G++ W +G PP+
Sbjct: 249 KDGSGEPWFVAAKDIASNTLYVVQGHDHPWLRSRELVAGNVSWVAGEPPA 298
Score = 39.3 bits (90), Expect(2) = 3e-17
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG IPK VR +A + LPN +KD F
Sbjct: 159 QLSKTMFPLGEIPKTRVREIAAQIGLPNAKKKDSTGICF 197
[105][TOP]
>UniRef100_A3NDE4 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Burkholderia
pseudomallei RepID=MNMA_BURP6
Length = 383
Score = 72.8 bits (177), Expect(2) = 3e-17
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTPDGKTVGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + R R G++ W +G PP+
Sbjct: 249 KDGSGEPWFVAAKDIASNTLYVVQGHDHPWLRSRELVAGNVSWVAGEPPA 298
Score = 39.3 bits (90), Expect(2) = 3e-17
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG IPK VR +A + LPN +KD F
Sbjct: 159 QLSKTMFPLGEIPKTRVREIAAQIGLPNAKKKDSTGICF 197
[106][TOP]
>UniRef100_C6IZU8 tRNA methyl transferase n=1 Tax=Paenibacillus sp. oral taxon 786
str. D14 RepID=C6IZU8_9BACL
Length = 378
Score = 77.4 bits (189), Expect(2) = 3e-17
Identities = 36/113 (31%), Positives = 64/113 (56%), Gaps = 8/113 (7%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S G+CF+G+ F EF++ ++ + G +++ TG+ G+H G +YT+GQRQGL + G
Sbjct: 195 KDSTGVCFIGERNFKEFLSNYLPAQSGDMIDIVTGEVKGRHDGLMYYTLGQRQGLGIGGS 254
Query: 275 ----PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFR----VGSLKWFSGLPPSP 409
PW+V +KD++ N+++V + DK ++ + W +G P
Sbjct: 255 GTGEPWFVADKDLERNILYVVQG----DKHPSLYSTSLIASGVNWIAGADKMP 303
Score = 34.7 bits (78), Expect(2) = 3e-17
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FP+G +PK EVRR+A + L +KD F
Sbjct: 164 QLSKAMFPIGHLPKPEVRRIAEEAGLYTAKKKDSTGVCF 202
[107][TOP]
>UniRef100_A4MEZ5 TRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=3
Tax=Burkholderia pseudomallei RepID=A4MEZ5_BURPS
Length = 377
Score = 72.8 bits (177), Expect(2) = 3e-17
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 184 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTPDGKTVGEHIGLAFYTFGQRKGIGLGGS 242
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + R R G++ W +G PP+
Sbjct: 243 KDGSGEPWFVAAKDIASNTLYVVQGHDHPWLRSRELVAGNVSWVAGEPPA 292
Score = 39.3 bits (90), Expect(2) = 3e-17
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG IPK VR +A + LPN +KD F
Sbjct: 153 QLSKTMFPLGEIPKTRVREIAAQIGLPNAKKKDSTGICF 191
[108][TOP]
>UniRef100_A0AIW1 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Listeria welshimeri
serovar 6b str. SLCC5334 RepID=MNMA_LISW6
Length = 371
Score = 73.9 bits (180), Expect(2) = 3e-17
Identities = 36/82 (43%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--P 268
K S GICF+G+ F +F++ ++ + G + + G+ LGKH G +YTIGQR GL +
Sbjct: 194 KDSTGICFIGERNFKQFLSEYLPAQPGEMRTLD-GEVLGKHDGLMYYTIGQRHGLGIGGD 252
Query: 269 GGPWYVVEKDVKNNVVFVSRNY 334
G PW+VV KD+K NV+FV + +
Sbjct: 253 GEPWFVVGKDLKANVLFVEQGF 274
Score = 38.1 bits (87), Expect(2) = 3e-17
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QLK+++FPLG + K EVR +ATK L ++KD F
Sbjct: 163 QLKKVMFPLGGMEKTEVREIATKAGLATANKKDSTGICF 201
[109][TOP]
>UniRef100_B2VDQ2 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Erwinia tasmaniensis RepID=B2VDQ2_ERWT9
Length = 369
Score = 80.1 bits (196), Expect(2) = 3e-17
Identities = 38/86 (44%), Positives = 61/86 (70%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F+EF++R++ + G IL + GD +G+H+G ++T+GQR+GL + G
Sbjct: 193 KDSTGICFIGERKFTEFLSRYLPAQPGPILSVD-GDNVGQHQGLMYHTLGQRKGLGIGGR 251
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV NNV+ V++ +
Sbjct: 252 KEANDDPWYVVDKDVANNVLVVAQGH 277
Score = 32.0 bits (71), Expect(2) = 3e-17
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K EVRR+A + +L +KD F
Sbjct: 162 QIAQSLFPVGELAKPEVRRIAEQLELVTAKKKDSTGICF 200
[110][TOP]
>UniRef100_C9Y1M0 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Cronobacter turicensis
RepID=C9Y1M0_9ENTR
Length = 369
Score = 79.0 bits (193), Expect(2) = 3e-17
Identities = 36/86 (41%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F EF+ R++ + G I+ + GD +G+H+G ++T+GQR+GL + G
Sbjct: 194 KDSTGICFIGERKFREFLGRYLPAQPGKIVTVD-GDVIGEHQGLMYHTLGQRKGLGIGGT 252
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV+NN++ V++ +
Sbjct: 253 KDGGEEPWYVVDKDVENNILIVAQGH 278
Score = 33.1 bits (74), Expect(2) = 3e-17
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K EVRR+A + DL +KD F
Sbjct: 163 QVAQSLFPVGELEKPEVRRIAEELDLVTAKKKDSTGICF 201
[111][TOP]
>UniRef100_B3R6Q0 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Cupriavidus taiwanensis
RepID=MNMA_CUPTR
Length = 361
Score = 70.9 bits (172), Expect(2) = 3e-17
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G + E G +G+H G FYT+GQR+G+ L G
Sbjct: 193 KDSTGICFIGERPFRDFLNRYLPTKPGPMKTPE-GKVVGEHIGLAFYTLGQRKGIGLGGS 251
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
WYV KD+ NN ++V + + + L W +G PP+
Sbjct: 252 RDGNGDAWYVARKDMANNTLYVVQGHDHPWLLTPVLNASDLSWVAGEPPA 301
Score = 41.2 bits (95), Expect(2) = 3e-17
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL R LFPLG IPK VR +A + LPN +KD F
Sbjct: 162 QLSRTLFPLGEIPKTRVREIAAEIGLPNAKKKDSTGICF 200
[112][TOP]
>UniRef100_UPI00016AC000 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Burkholderia pseudomallei 9 RepID=UPI00016AC000
Length = 352
Score = 72.8 bits (177), Expect(2) = 3e-17
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 181 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTPDGKTVGEHIGLAFYTFGQRKGIGLGGS 239
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + R R G++ W +G PP+
Sbjct: 240 KDGSGEPWFVAAKDIASNTLYVVQGHDHPWLRSRELVAGNVSWVAGEPPA 289
Score = 39.3 bits (90), Expect(2) = 3e-17
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG IPK VR +A + LPN +KD F
Sbjct: 150 QLSKTMFPLGEIPKTRVREIAAQIGLPNAKKKDSTGICF 188
[113][TOP]
>UniRef100_UPI00016AF5FB tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=3
Tax=Burkholderia pseudomallei RepID=UPI00016AF5FB
Length = 339
Score = 72.8 bits (177), Expect(2) = 3e-17
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTPDGKTVGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + R R G++ W +G PP+
Sbjct: 249 KDGSGEPWFVAAKDIASNTLYVVQGHDHPWLRSRELVAGNVSWVAGEPPA 298
Score = 39.3 bits (90), Expect(2) = 3e-17
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG IPK VR +A + LPN +KD F
Sbjct: 159 QLSKTMFPLGEIPKTRVREIAAQIGLPNAKKKDSTGICF 197
[114][TOP]
>UniRef100_A3MP84 tRNA-specific 2-thiouridylase mnmA n=10 Tax=Burkholderia mallei
RepID=MNMA_BURM7
Length = 383
Score = 72.4 bits (176), Expect(2) = 3e-17
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTPDGKTVGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + R R G++ W +G PP+
Sbjct: 249 KDGSGEPWFVAVKDIASNTLYVVQGHDHPWLRSRELVAGNVSWVAGEPPA 298
Score = 39.3 bits (90), Expect(2) = 3e-17
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG IPK VR +A + LPN +KD F
Sbjct: 159 QLSKTMFPLGEIPKTRVREIAAQIGLPNAKKKDSTGICF 197
[115][TOP]
>UniRef100_B8DDZ8 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Listeria monocytogenes
HCC23 RepID=MNMA_LISMH
Length = 371
Score = 74.7 bits (182), Expect(2) = 3e-17
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--P 268
K S GICF+G+ F +F++ ++ + G + G+ LGKH G +YTIGQR GL +
Sbjct: 194 KDSTGICFIGERNFKQFLSEYLPAQPGE-MRTLNGEVLGKHDGLMYYTIGQRHGLGIGGD 252
Query: 269 GGPWYVVEKDVKNNVVFVSRNY 334
G PW+VV KD+K NV+FV + +
Sbjct: 253 GEPWFVVGKDLKENVLFVEQGF 274
Score = 37.0 bits (84), Expect(2) = 3e-17
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QLK+++FPLG + K EVR +A K L ++KD F
Sbjct: 163 QLKKVMFPLGAMEKTEVREIAKKAGLATANKKDSTGICF 201
[116][TOP]
>UniRef100_UPI0000F3CC8E tRNA-specific 2-thiouridylase MnmA n=1 Tax=Listeria monocytogenes
10403S RepID=UPI0000F3CC8E
Length = 371
Score = 72.8 bits (177), Expect(2) = 3e-17
Identities = 35/82 (42%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--P 268
K S GICF+G+ F +F++ ++ + G + + G+ LGKH G +YTIGQR GL +
Sbjct: 194 KDSTGICFIGERNFKQFLSEYLPAQPGEMRTLD-GEVLGKHDGLMYYTIGQRHGLGIGGD 252
Query: 269 GGPWYVVEKDVKNNVVFVSRNY 334
G PW+VV K++K NV+FV + +
Sbjct: 253 GEPWFVVGKNLKENVLFVEQGF 274
Score = 38.9 bits (89), Expect(2) = 3e-17
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QLK+++FPLG + K EVR +A K L D+KD F
Sbjct: 163 QLKKVMFPLGAMEKTEVREIAKKAGLATADKKDSTGICF 201
[117][TOP]
>UniRef100_A7MFV2 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Cronobacter sakazakii
ATCC BAA-894 RepID=MNMA_ENTS8
Length = 369
Score = 78.6 bits (192), Expect(2) = 3e-17
Identities = 36/86 (41%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F EF+ R++ + G I+ + GD +G+H+G ++T+GQR+GL + G
Sbjct: 194 KDSTGICFIGERKFREFLGRYLPAQPGKIVTVD-GDTIGEHQGLMYHTLGQRKGLGIGGT 252
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV+NN++ V++ +
Sbjct: 253 KDGGEEPWYVVDKDVENNILIVAQGH 278
Score = 33.1 bits (74), Expect(2) = 3e-17
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K EVRR+A + DL +KD F
Sbjct: 163 QVAQSLFPVGELEKPEVRRIAEELDLVTAKKKDSTGICF 201
[118][TOP]
>UniRef100_Q0K720 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Ralstonia eutropha H16
RepID=MNMA_RALEH
Length = 361
Score = 70.5 bits (171), Expect(2) = 3e-17
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G + E G +G+H G FYT+GQR+G+ L G
Sbjct: 193 KDSTGICFIGERPFRDFLNRYLPTKPGPMKTPE-GKVVGEHIGLAFYTLGQRKGIGLGGS 251
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
WYV KD+ NN ++V + + + L W +G PP+
Sbjct: 252 REGNGDAWYVARKDMANNTLYVVQGHDHPWLLTPVLTASDLSWVAGEPPA 301
Score = 41.2 bits (95), Expect(2) = 3e-17
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL R LFPLG IPK VR +A + LPN +KD F
Sbjct: 162 QLSRTLFPLGEIPKTRVREIAAEIGLPNAKKKDSTGICF 200
[119][TOP]
>UniRef100_Q607H5 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Methylococcus capsulatus
RepID=MNMA_METCA
Length = 371
Score = 79.0 bits (193), Expect(2) = 4e-17
Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 6/111 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ RF +F+AR++ R G I E G LG+H G +YT+GQR GL + G
Sbjct: 189 KDSTGICFIGERRFKDFLARYLPARPGDIRTPE-GVLLGRHDGLMYYTLGQRSGLGIGGT 247
Query: 272 -----GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPSP 409
PWYV++KD+ NV+ V + + R L W G P+P
Sbjct: 248 RAGGQEPWYVLDKDLARNVLVVGQGHDHPLLYRDGLLASRLHWVDGAGPAP 298
Score = 32.3 bits (72), Expect(2) = 4e-17
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL R LFPLG + K EVR LA N +KD F
Sbjct: 158 QLARTLFPLGGLRKTEVRALAAGAGFANDAKKDSTGICF 196
[120][TOP]
>UniRef100_Q1ZS39 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Photobacterium angustum S14 RepID=Q1ZS39_PHOAS
Length = 371
Score = 77.8 bits (190), Expect(2) = 4e-17
Identities = 35/86 (40%), Positives = 58/86 (67%), Gaps = 8/86 (9%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F+EF+ +++ + G I+ A+ G +G+H+G ++T+GQR+GL + G
Sbjct: 197 KDSTGICFIGERKFTEFLGKYLPAQPGKIVTADEGKEIGEHQGLMYHTLGQRKGLHIGGQ 256
Query: 272 -------GPWYVVEKDVKNNVVFVSR 328
WYVV+KDVKNN++ V +
Sbjct: 257 KGGNGHEDAWYVVDKDVKNNLLIVGQ 282
Score = 33.5 bits (75), Expect(2) = 4e-17
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ R LFP+G + K EVRR+A + DL +KD F
Sbjct: 166 QIARSLFPVGELEKPEVRRIAEEQDLITAKKKDSTGICF 204
[121][TOP]
>UniRef100_B4EVG2 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Proteus mirabilis
RepID=MNMA_PROMH
Length = 367
Score = 77.4 bits (189), Expect(2) = 4e-17
Identities = 40/112 (35%), Positives = 70/112 (62%), Gaps = 10/112 (8%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F++F++R++ + G I+ + G+ +G+H+G ++T+GQR+GL + G
Sbjct: 194 KDSTGICFIGERKFTDFLSRYLPAKPGPIVTVD-GETIGEHQGLMYHTLGQRKGLGIGGT 252
Query: 272 -----GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVG----SLKWFSGLP 400
PWYVV+KDV NN++ V++ + + R+ VG L W + P
Sbjct: 253 KEGSEDPWYVVDKDVANNILIVAQGH----EHPRLMSVGLIAQQLHWVAREP 300
Score = 33.9 bits (76), Expect(2) = 4e-17
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K EVR++A K DL +KD F
Sbjct: 163 QIAQSLFPVGEMEKPEVRKIAEKLDLATAKKKDSTGICF 201
[122][TOP]
>UniRef100_Q3J9J6 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Nitrosococcus oceani
RepID=MNMA_NITOC
Length = 367
Score = 74.3 bits (181), Expect(2) = 4e-17
Identities = 40/111 (36%), Positives = 63/111 (56%), Gaps = 8/111 (7%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGD--FLGKHRGFWFYTIGQRQGLRLP 268
K S GICF+G+ RF EF++R++ + G E T D ++G+H G +YT+GQR+GL +
Sbjct: 190 KDSTGICFIGERRFKEFLSRYLPAQPG---EMRTPDKEWIGQHDGLMYYTLGQRRGLGIG 246
Query: 269 G------GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPP 403
G PW+VV K++ N ++V++ + I L W +G PP
Sbjct: 247 GRKNSNGAPWFVVGKNLPQNTLYVAQGRHHPWLKSLILEANQLHWVAGHPP 297
Score = 37.0 bits (84), Expect(2) = 4e-17
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL LFPLG + K +VRR+A + LPN +KD F
Sbjct: 159 QLSHTLFPLGELEKPQVRRIAIQARLPNHSKKDSTGICF 197
[123][TOP]
>UniRef100_A1S7B1 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Shewanella amazonensis
SB2B RepID=MNMA_SHEAM
Length = 377
Score = 77.8 bits (190), Expect(2) = 6e-17
Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F +F+A ++ + G I E GD +G+H G ++T+GQR+GL + G
Sbjct: 204 KDSTGICFIGERKFKDFLATYLPAQPGNI-ETPEGDIIGRHEGLMYHTLGQRKGLGIGGM 262
Query: 272 -----GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PWYVV+KD+ NV+ V++ + + RV L W P+
Sbjct: 263 KNSNDDPWYVVDKDMARNVLVVAQGHEHPRLMSKGMRVNQLHWVDRTGPA 312
Score = 33.1 bits (74), Expect(2) = 6e-17
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ R LFP+G + K EVRR+A + L D+KD F
Sbjct: 173 QVARSLFPVGELEKPEVRRIAEEQGLITHDKKDSTGICF 211
[124][TOP]
>UniRef100_C6CGX9 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Dickeya zeae Ech1591 RepID=C6CGX9_DICZE
Length = 372
Score = 81.3 bits (199), Expect(2) = 6e-17
Identities = 36/86 (41%), Positives = 59/86 (68%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F +F+AR++ + G IL + G +G+H+G ++T+GQR+GL + G
Sbjct: 196 KDSTGICFIGERKFRDFLARYLPAQPGPILSVDDGKVMGEHQGLMYHTLGQRKGLGIGGV 255
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV NV++V++ +
Sbjct: 256 KEGGDDPWYVVDKDVAGNVLYVAQGH 281
Score = 29.6 bits (65), Expect(2) = 6e-17
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + LFP+G + K +VR++A + L +KD F
Sbjct: 165 QLAQSLFPVGELEKPQVRKIAEQLSLATARKKDSTGICF 203
[125][TOP]
>UniRef100_UPI0000E88001 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Methylophilales bacterium HTCC2181
RepID=UPI0000E88001
Length = 369
Score = 78.6 bits (192), Expect(2) = 6e-17
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--- 265
K S GICF+G+ F+EF+ +I + G I+ A+ G+ LG H G FYTIGQRQGL++
Sbjct: 190 KDSTGICFIGERPFAEFIGGYINKDPGSIVSADGGEVLGTHDGLNFYTIGQRQGLKIGGV 249
Query: 266 ---PGGPWYVVEKDVKNNVVFVSRNY 334
G PW+V+ KD K N + V + +
Sbjct: 250 QKGNGKPWFVISKDFKKNQLVVGQGH 275
Score = 32.3 bits (72), Expect(2) = 6e-17
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG + K +VR +A K L DRKD F
Sbjct: 159 QLSKSVFPLGGLLKKDVREIARKNSLHIHDRKDSTGICF 197
[126][TOP]
>UniRef100_Q7U353 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Candidatus Blochmannia
floridanus RepID=MNMA_BLOFL
Length = 369
Score = 77.0 bits (188), Expect(2) = 6e-17
Identities = 43/106 (40%), Positives = 61/106 (57%), Gaps = 6/106 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--- 265
K S GICF+GK F F++ +I + G I+ G+ LG H+G FYTIGQR+GL +
Sbjct: 189 KDSTGICFIGKRNFRSFLSNYIAIQPGDIINIH-GNKLGLHQGIPFYTIGQRKGLNIGGI 247
Query: 266 ---PGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSG 394
G PWYVV+K++ +NV+ V++ RIF V + W G
Sbjct: 248 SNGNGKPWYVVDKNITHNVLIVAQGINHPCLMSRIFIVQKIFWIKG 293
Score = 33.9 bits (76), Expect(2) = 6e-17
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QLKR LFP+G + K VR++A + +L ++KD F
Sbjct: 158 QLKRCLFPIGSLTKLTVRKIAKELNLITANKKDSTGICF 196
[127][TOP]
>UniRef100_B1YTE9 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Burkholderia ambifaria
MC40-6 RepID=MNMA_BURA4
Length = 389
Score = 70.9 bits (172), Expect(2) = 7e-17
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTPDGKVIGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + R G++ W +G PP+
Sbjct: 249 KDGSGEPWFVAAKDIASNTLYVVQGHDHPWLLSRQLVAGNVSWVAGEPPA 298
Score = 39.7 bits (91), Expect(2) = 7e-17
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG IPK +VR +A + LPN +KD F
Sbjct: 159 QLSKTMFPLGEIPKTKVREIAAQIGLPNAKKKDSTGICF 197
[128][TOP]
>UniRef100_B1FFA7 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Burkholderia ambifaria IOP40-10 RepID=B1FFA7_9BURK
Length = 384
Score = 70.9 bits (172), Expect(2) = 7e-17
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTPDGKVIGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + R G++ W +G PP+
Sbjct: 249 KDGSGEPWFVAAKDIASNTLYVVQGHDHPWLLSRQLVAGNVSWVAGEPPA 298
Score = 39.7 bits (91), Expect(2) = 7e-17
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG IPK +VR +A + LPN +KD F
Sbjct: 159 QLSKTMFPLGEIPKTKVREIAAQIGLPNAKKKDSTGICF 197
[129][TOP]
>UniRef100_Q0BI73 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Burkholderia ambifaria
AMMD RepID=MNMA_BURCM
Length = 384
Score = 70.9 bits (172), Expect(2) = 7e-17
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTPDGKVIGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + R G++ W +G PP+
Sbjct: 249 KDGSGEPWFVAAKDIASNTLYVVQGHDHPWLLSRQLVAGNVSWVAGEPPA 298
Score = 39.7 bits (91), Expect(2) = 7e-17
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG IPK +VR +A + LPN +KD F
Sbjct: 159 QLSKTMFPLGEIPKTKVREIAAQIGLPNAKKKDSTGICF 197
[130][TOP]
>UniRef100_B2JGI9 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Burkholderia phymatum
STM815 RepID=MNMA_BURP8
Length = 384
Score = 70.1 bits (170), Expect(2) = 7e-17
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ R G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTRPGP-MKTTDGKTVGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPP 403
PW+V KD+++N ++V++ + R G+ W +G P
Sbjct: 249 KDGSGEPWFVAGKDIESNTLYVAQGHDHPWLLSRTLTAGNTSWVAGHAP 297
Score = 40.4 bits (93), Expect(2) = 7e-17
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + LFPLG IPK +VR +A + LPN +KD F
Sbjct: 159 QLSKTLFPLGDIPKTKVREIAEQIGLPNAKKKDSTGICF 197
[131][TOP]
>UniRef100_Q39JI1 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Burkholderia sp. 383
RepID=MNMA_BURS3
Length = 383
Score = 70.9 bits (172), Expect(2) = 7e-17
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTPDGKIVGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + R G++ W +G PP+
Sbjct: 249 KSGNGDPWFVAAKDIASNTLYVVQGHDHPWLLARELVAGNVSWVAGEPPA 298
Score = 39.7 bits (91), Expect(2) = 7e-17
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG IPK +VR +A + LPN +KD F
Sbjct: 159 QLSKTMFPLGEIPKTKVREIAAQIGLPNAKKKDSTGICF 197
[132][TOP]
>UniRef100_B2SX74 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Burkholderia
phytofirmans PsJN RepID=MNMA_BURPP
Length = 383
Score = 70.9 bits (172), Expect(2) = 7e-17
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 192 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTTDGKVVGEHIGLAFYTFGQRKGIGLGGS 250
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V++ + G+ W +G PP+
Sbjct: 251 KDGSGEPWFVAGKDIASNTLYVAQGHDHAWLLSHTLSAGNTSWVAGEPPA 300
Score = 39.7 bits (91), Expect(2) = 7e-17
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + LFPLG IPK +VR +A + LPN +KD F
Sbjct: 161 QLSKTLFPLGEIPKTKVREIAEQIALPNAKKKDSTGICF 199
[133][TOP]
>UniRef100_A2WCK8 TRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Burkholderia dolosa AUO158 RepID=A2WCK8_9BURK
Length = 382
Score = 70.9 bits (172), Expect(2) = 7e-17
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTPDGKLVGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + R G++ W +G PP+
Sbjct: 249 KDGSGEPWFVAAKDIASNTLYVVQGHDHPWLLSRQLVAGNVSWVAGEPPA 298
Score = 39.7 bits (91), Expect(2) = 7e-17
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG IPK +VR +A + LPN +KD F
Sbjct: 159 QLSKTMFPLGEIPKTKVREIAAQIGLPNAKKKDSTGICF 197
[134][TOP]
>UniRef100_B9C0F4 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=2
Tax=Burkholderia multivorans RepID=B9C0F4_9BURK
Length = 381
Score = 70.9 bits (172), Expect(2) = 7e-17
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTPDGKLVGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + R G++ W +G PP+
Sbjct: 249 KDGSGEPWFVAAKDIPSNTLYVVQGHDHPWLLSRELVAGNVSWVAGEPPA 298
Score = 39.7 bits (91), Expect(2) = 7e-17
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG IPK +VR +A + LPN +KD F
Sbjct: 159 QLSKTMFPLGEIPKTKVREIAAQIGLPNAKKKDSTGICF 197
[135][TOP]
>UniRef100_A9AH63 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Burkholderia multivorans
ATCC 17616 RepID=MNMA_BURM1
Length = 381
Score = 70.9 bits (172), Expect(2) = 7e-17
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTPDGKLVGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + R G++ W +G PP+
Sbjct: 249 KDGSGEPWFVAAKDIASNTLYVVQGHDHPWLLSRELVAGNVSWVAGEPPA 298
Score = 39.7 bits (91), Expect(2) = 7e-17
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG IPK +VR +A + LPN +KD F
Sbjct: 159 QLSKTMFPLGEIPKTKVREIAAQIGLPNAKKKDSTGICF 197
[136][TOP]
>UniRef100_C6D7V0 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Paenibacillus sp. JDR-2 RepID=C6D7V0_PAESJ
Length = 377
Score = 75.5 bits (184), Expect(2) = 7e-17
Identities = 31/80 (38%), Positives = 54/80 (67%), Gaps = 4/80 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S G+CF+G+ F EF++ ++ R G +++ +G+ G+H G +YT+GQRQGL + G
Sbjct: 195 KDSTGVCFIGERNFKEFLSGYLPARPGDMVDIRSGEVKGRHDGLMYYTLGQRQGLGIGGS 254
Query: 275 ----PWYVVEKDVKNNVVFV 322
PW+V +KD++ N+++V
Sbjct: 255 GNGEPWFVADKDLERNILYV 274
Score = 35.0 bits (79), Expect(2) = 7e-17
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL++ +FP+G +PK EVRR+A + L +KD F
Sbjct: 164 QLEKAMFPIGHLPKPEVRRIAEEAGLYTAKKKDSTGVCF 202
[137][TOP]
>UniRef100_UPI0001B4294E tRNA-specific 2-thiouridylase MnmA n=1 Tax=Listeria monocytogenes
FSL N1-017 RepID=UPI0001B4294E
Length = 371
Score = 74.7 bits (182), Expect(2) = 7e-17
Identities = 36/82 (43%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--P 268
K S GICF+G+ F +F++ ++ + G + + G+ LGKH G +YTIGQR GL +
Sbjct: 194 KDSTGICFIGERNFKQFLSEYLPAQPGEMRTLD-GEVLGKHDGLMYYTIGQRHGLGIGGD 252
Query: 269 GGPWYVVEKDVKNNVVFVSRNY 334
G PW+VV KD+K NV+FV + +
Sbjct: 253 GEPWFVVGKDLKENVLFVEQGF 274
Score = 35.8 bits (81), Expect(2) = 7e-17
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QLK+++FPLG + K EVR +A K L ++KD F
Sbjct: 163 QLKKVMFPLGGMEKTEVREIAKKAGLATANKKDSTGICF 201
[138][TOP]
>UniRef100_C1KVF9 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Listeria monocytogenes
RepID=MNMA_LISMC
Length = 371
Score = 74.7 bits (182), Expect(2) = 7e-17
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--P 268
K S GICF+G+ F +F++ ++ + G + G+ LGKH G +YTIGQR GL +
Sbjct: 194 KDSTGICFIGERNFKQFLSEYLPAQPGE-MRTLNGEVLGKHDGLMYYTIGQRHGLGIGGD 252
Query: 269 GGPWYVVEKDVKNNVVFVSRNY 334
G PW+VV KD+K NV+FV + +
Sbjct: 253 GEPWFVVGKDLKENVLFVEQGF 274
Score = 35.8 bits (81), Expect(2) = 7e-17
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QLK+++FPLG + K EVR +A K L ++KD F
Sbjct: 163 QLKKVMFPLGGMEKTEVREIAKKAGLATANKKDSTGICF 201
[139][TOP]
>UniRef100_UPI0001A428C0 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Pectobacterium carotovorum subsp. carotovorum WPP14
RepID=UPI0001A428C0
Length = 368
Score = 80.5 bits (197), Expect(2) = 7e-17
Identities = 35/86 (40%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F++F+AR++ + G IL + +G+H+G ++T+GQR+GL + G
Sbjct: 194 KDSTGICFIGERKFTDFLARYLPAQPGPILSVDDNKPMGQHQGLMYHTLGQRKGLGIGGV 253
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV NN+++V++ +
Sbjct: 254 KDGGEDPWYVVDKDVANNILYVAQGH 279
Score = 30.0 bits (66), Expect(2) = 7e-17
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K +VR++A + +L +KD F
Sbjct: 163 QIAQSLFPVGELEKPQVRKIAEELELATAKKKDSTGICF 201
[140][TOP]
>UniRef100_C6NI58 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Pectobacterium wasabiae WPP163 RepID=C6NI58_9ENTR
Length = 368
Score = 80.5 bits (197), Expect(2) = 7e-17
Identities = 35/86 (40%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F++F+AR++ + G IL + +G+H+G ++T+GQR+GL + G
Sbjct: 194 KDSTGICFIGERKFTDFLARYLPAQPGPILSVDDNKPMGQHQGLMYHTLGQRKGLGIGGV 253
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV NN+++V++ +
Sbjct: 254 KDGGEDPWYVVDKDVANNILYVAQGH 279
Score = 30.0 bits (66), Expect(2) = 7e-17
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K +VR++A + +L +KD F
Sbjct: 163 QIAQSLFPVGELEKPQVRKIAEELELATAKKKDSTGICF 201
[141][TOP]
>UniRef100_C6DFW7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Pectobacterium
carotovorum subsp. carotovorum PC1 RepID=MNMA_PECCP
Length = 368
Score = 80.5 bits (197), Expect(2) = 7e-17
Identities = 35/86 (40%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F++F+AR++ + G IL + +G+H+G ++T+GQR+GL + G
Sbjct: 194 KDSTGICFIGERKFTDFLARYLPAQPGPILSVDDNKPMGQHQGLMYHTLGQRKGLGIGGV 253
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV NN+++V++ +
Sbjct: 254 KDGGEDPWYVVDKDVANNILYVAQGH 279
Score = 30.0 bits (66), Expect(2) = 7e-17
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K +VR++A + +L +KD F
Sbjct: 163 QIAQSLFPVGELEKPQVRKIAEELELATAKKKDSTGICF 201
[142][TOP]
>UniRef100_Q6D4E9 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Pectobacterium
atrosepticum RepID=MNMA_ERWCT
Length = 368
Score = 80.5 bits (197), Expect(2) = 7e-17
Identities = 35/86 (40%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F++F+AR++ + G IL + +G+H+G ++T+GQR+GL + G
Sbjct: 194 KDSTGICFIGERKFTDFLARYLPAQPGPILSVDDNKPMGQHQGLMYHTLGQRKGLGIGGV 253
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV NN+++V++ +
Sbjct: 254 KDGGEDPWYVVDKDVANNILYVAQGH 279
Score = 30.0 bits (66), Expect(2) = 7e-17
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K +VR++A + +L +KD F
Sbjct: 163 QIAQSLFPVGELEKPQVRKIAEELELATAKKKDSTGICF 201
[143][TOP]
>UniRef100_B8KGE2 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=gamma proteobacterium NOR5-3 RepID=B8KGE2_9GAMM
Length = 368
Score = 76.6 bits (187), Expect(2) = 7e-17
Identities = 38/82 (46%), Positives = 54/82 (65%), Gaps = 6/82 (7%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ RF +F+ R++ + G+I E GD +G+H G ++TIGQRQGL + G
Sbjct: 191 KDSTGICFIGERRFKDFLQRYLPAQPGVIKTLE-GDTIGEHSGLMYHTIGQRQGLGIGGL 249
Query: 272 -----GPWYVVEKDVKNNVVFV 322
PWYV KD+ NNV++V
Sbjct: 250 ATHNEAPWYVAGKDLGNNVLWV 271
Score = 33.9 bits (76), Expect(2) = 7e-17
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
+L + LFPLG I K EVR A DL D+KD F
Sbjct: 160 ELAKTLFPLGEIAKPEVRARAAAADLTTHDKKDSTGICF 198
[144][TOP]
>UniRef100_C5B8B9 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Edwardsiella ictaluri
93-146 RepID=MNMA_EDWI9
Length = 367
Score = 76.6 bits (187), Expect(2) = 7e-17
Identities = 42/112 (37%), Positives = 67/112 (59%), Gaps = 10/112 (8%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F EF+ R++ + G I+ + G+ +G+H+G ++T+GQR+GL + G
Sbjct: 194 KDSTGICFIGERKFREFLGRYLPAQPGKIVTVD-GETIGEHQGLMYHTLGQRKGLGIGGT 252
Query: 272 -----GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVG----SLKWFSGLP 400
PWYVV+KD+ NNV+ V++ + R+F G L W LP
Sbjct: 253 KEGSEEPWYVVDKDLDNNVLVVAQGH----DHPRLFSNGLIAQQLHWVDRLP 300
Score = 33.9 bits (76), Expect(2) = 7e-17
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K EVRR+A + DL +KD F
Sbjct: 163 QVAQSLFPVGELEKPEVRRIAAQLDLATAKKKDSTGICF 201
[145][TOP]
>UniRef100_UPI00016A5270 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=2
Tax=Burkholderia oklahomensis RepID=UPI00016A5270
Length = 409
Score = 70.1 bits (170), Expect(2) = 9e-17
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTPDGKTVGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + R G++ W +G PP+
Sbjct: 249 KDGSGEPWFVAAKDIASNTLYVVQGHDHPWLLSRELVAGNVSWVAGEPPA 298
Score = 40.0 bits (92), Expect(2) = 9e-17
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + LFPLG IPK +VR +A + LPN +KD F
Sbjct: 159 QLSKTLFPLGEIPKTKVREIAEQIGLPNAKKKDSTGICF 197
[146][TOP]
>UniRef100_B1JVW3 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Burkholderia cenocepacia
RepID=MNMA_BURCC
Length = 391
Score = 70.5 bits (171), Expect(2) = 9e-17
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTPDGKVVGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + R G++ W +G PP+
Sbjct: 249 KDGNGDPWFVAAKDIASNTLYVVQGHDHPWLLSRELVAGNVSWVAGEPPA 298
Score = 39.7 bits (91), Expect(2) = 9e-17
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG IPK +VR +A + LPN +KD F
Sbjct: 159 QLSKTMFPLGEIPKTKVREIAAQIGLPNAKKKDSTGICF 197
[147][TOP]
>UniRef100_B4EE50 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Burkholderia cenocepacia
J2315 RepID=MNMA_BURCJ
Length = 391
Score = 70.5 bits (171), Expect(2) = 9e-17
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTPDGKVVGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + R G++ W +G PP+
Sbjct: 249 KSGSGEPWFVAAKDIASNTLYVVQGHDHPWLLSRELVAGNVSWVAGEPPA 298
Score = 39.7 bits (91), Expect(2) = 9e-17
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG IPK +VR +A + LPN +KD F
Sbjct: 159 QLSKTMFPLGEIPKTKVREIAAQIGLPNAKKKDSTGICF 197
[148][TOP]
>UniRef100_Q1BZ27 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Burkholderia cenocepacia
RepID=MNMA_BURCA
Length = 391
Score = 70.5 bits (171), Expect(2) = 9e-17
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTPDGKVVGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + R G++ W +G PP+
Sbjct: 249 KSGSGEPWFVAAKDIASNTLYVVQGHDHPWLLSRELVAGNVSWVAGEPPA 298
Score = 39.7 bits (91), Expect(2) = 9e-17
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG IPK +VR +A + LPN +KD F
Sbjct: 159 QLSKTMFPLGEIPKTKVREIAAQIGLPNAKKKDSTGICF 197
[149][TOP]
>UniRef100_A8RCB7 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM
3991 RepID=A8RCB7_9FIRM
Length = 387
Score = 83.6 bits (205), Expect(2) = 9e-17
Identities = 42/106 (39%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ F F++ ++ ++G I++ E+ + +G+H G +YTIGQR+GL + G
Sbjct: 201 KDSTGICFIGERNFKAFLSNYLPSKDGDIVDIESLEVIGRHAGVLYYTIGQRKGLGIGGN 260
Query: 272 -GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
GPW+VV KDV+ NV++V+ S V + WFS PS
Sbjct: 261 KGPWFVVGKDVEKNVLYVTNGNESDWLFTNSCIVSGVNWFSNERPS 306
Score = 26.6 bits (57), Expect(2) = 9e-17
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 6 LKRLLFPLGCIPKDEVRRLATKFDLPNKDRK 98
L+ LFP+G + K EVR++A + L + K
Sbjct: 170 LQHALFPIGHLEKHEVRQIAKELHLDSVSAK 200
[150][TOP]
>UniRef100_Q145K0 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Burkholderia xenovorans
LB400 RepID=MNMA_BURXL
Length = 381
Score = 70.9 bits (172), Expect(2) = 9e-17
Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G + E G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTKPGPMKTTE-GKVVGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V++ + G+ W +G PP+
Sbjct: 249 KDGSGEPWFVAGKDIPSNTLYVAQGHDHPWLLSHTLSAGNTSWVAGEPPA 298
Score = 39.3 bits (90), Expect(2) = 9e-17
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + LFPLG IPK VR +A + LPN +KD F
Sbjct: 159 QLSKTLFPLGEIPKTRVREIAEQIALPNAKKKDSTGICF 197
[151][TOP]
>UniRef100_B9BCZ7 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Burkholderia multivorans CGD1 RepID=B9BCZ7_9BURK
Length = 381
Score = 70.5 bits (171), Expect(2) = 9e-17
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTPDGKLVGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + R G++ W +G PP+
Sbjct: 249 KDGSGEPWFVAAKDIPSNTLYVVQGHDHPWLLSRGLVAGNVSWVAGEPPA 298
Score = 39.7 bits (91), Expect(2) = 9e-17
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG IPK +VR +A + LPN +KD F
Sbjct: 159 QLSKTMFPLGEIPKTKVREIAAQIGLPNAKKKDSTGICF 197
[152][TOP]
>UniRef100_C6P8V4 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571
RepID=C6P8V4_CLOTS
Length = 372
Score = 76.6 bits (187), Expect(2) = 9e-17
Identities = 37/82 (45%), Positives = 57/82 (69%), Gaps = 4/82 (4%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--- 265
K S GICF+G+ +F EF+ + + + G I + +G LGKH G FYT+GQR+GL +
Sbjct: 194 KDSTGICFIGERKFKEFLNQFLPAKPGEIRDL-SGRVLGKHDGLMFYTLGQRRGLGIGGI 252
Query: 266 -PGGPWYVVEKDVKNNVVFVSR 328
G PW+VV+KDV+NN+++V++
Sbjct: 253 GTGEPWFVVDKDVENNILYVAQ 274
Score = 33.5 bits (75), Expect(2) = 9e-17
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FP+G + K EVR +A K L D+KD F
Sbjct: 163 QLSKTIFPIGHLNKFEVREIARKAGLKTADKKDSTGICF 201
[153][TOP]
>UniRef100_Q0HW33 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Shewanella sp. MR-7
RepID=MNMA_SHESR
Length = 372
Score = 76.3 bits (186), Expect(2) = 9e-17
Identities = 37/84 (44%), Positives = 57/84 (67%), Gaps = 6/84 (7%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F+EF+ ++ + G I AE G+ +GKH+G ++T+GQR+GL + G
Sbjct: 199 KDSTGICFIGERKFTEFLGNYLPAQPGNIETAE-GEVIGKHQGLMYHTLGQRKGLGIGGM 257
Query: 272 -----GPWYVVEKDVKNNVVFVSR 328
PWYVV+KD+K NV+ V +
Sbjct: 258 KNSNDDPWYVVDKDLKRNVLVVGQ 281
Score = 33.9 bits (76), Expect(2) = 9e-17
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ R LFP+G + K EVR +A K L D+KD F
Sbjct: 168 QVARSLFPVGELEKHEVREIAKKMGLITHDKKDSTGICF 206
[154][TOP]
>UniRef100_Q0HJT7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Shewanella sp. MR-4
RepID=MNMA_SHESM
Length = 372
Score = 76.3 bits (186), Expect(2) = 9e-17
Identities = 37/84 (44%), Positives = 57/84 (67%), Gaps = 6/84 (7%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F+EF+ ++ + G I AE G+ +GKH+G ++T+GQR+GL + G
Sbjct: 199 KDSTGICFIGERKFTEFLGNYLPAQPGNIETAE-GEVIGKHQGLMYHTLGQRKGLGIGGM 257
Query: 272 -----GPWYVVEKDVKNNVVFVSR 328
PWYVV+KD+K NV+ V +
Sbjct: 258 KNSNDDPWYVVDKDLKRNVLVVGQ 281
Score = 33.9 bits (76), Expect(2) = 9e-17
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ R LFP+G + K EVR +A K L D+KD F
Sbjct: 168 QVARSLFPVGELEKHEVREIAKKMGLITHDKKDSTGICF 206
[155][TOP]
>UniRef100_Q82VV0 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Nitrosomonas europaea
RepID=MNMA_NITEU
Length = 362
Score = 75.1 bits (183), Expect(2) = 9e-17
Identities = 42/109 (38%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F EF+ R++ G I + +G+H G +YTIGQRQGL + G
Sbjct: 190 KDSTGICFIGERPFREFLNRYLPANPGEIHTLDD-QVVGEHLGVMYYTIGQRQGLGIGGT 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPP 403
PW+V KD+K NV++V + + R L W SG PP
Sbjct: 249 RQGSEQPWFVSGKDIKKNVLYVVQGHDHPALLRSSLTAADLSWISGTPP 297
Score = 35.0 bits (79), Expect(2) = 9e-17
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL +FP+G + K EVR++A + LPN +KD F
Sbjct: 159 QLSHTIFPIGHLYKREVRKIAREHRLPNSTKKDSTGICF 197
[156][TOP]
>UniRef100_Q1QUR7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Chromohalobacter
salexigens DSM 3043 RepID=MNMA_CHRSD
Length = 384
Score = 81.3 bits (199), Expect(2) = 1e-16
Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--- 265
K S GICF+G+ RFS+F+ +++ + G+I E G+ +G+H G +YT+GQRQGL +
Sbjct: 202 KDSTGICFIGERRFSDFLKQYLPAQPGVI-ETPEGEVIGEHMGLMYYTLGQRQGLGIGGL 260
Query: 266 ---PGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSL-----KWFSGLPPSP 409
P PWYV KD++ NV+ + K + SL +W +G PP+P
Sbjct: 261 PNHPDAPWYVAAKDLERNVLIAVQG-----KHHPLLYTDSLSTEPVEWVAGQPPAP 311
Score = 28.5 bits (62), Expect(2) = 1e-16
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 6 LKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
+ R LFP+G + K EVR +A + L +KD F
Sbjct: 172 IARTLFPVGEMEKSEVRAIAERHGLTTARKKDSTGICF 209
[157][TOP]
>UniRef100_A1TWB8 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Acidovorax citrulli
AAC00-1 RepID=MNMA_ACIAC
Length = 378
Score = 70.5 bits (171), Expect(2) = 1e-16
Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 13/117 (11%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ F EF+ R+I G IL+ + G LG+H G FYT+GQRQGL + G
Sbjct: 195 KDSTGICFIGERPFREFLNRYIQHAPGPILD-DRGRRLGQHVGLSFYTLGQRQGLGIGGV 253
Query: 272 ------------GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V K+V+ NV+ V + + + W +G PP+
Sbjct: 254 KDKGAQRGGGEHAPWFVARKEVERNVLRVVQGHDHPWLLSHTLQATDANWVAGRPPA 310
Score = 39.3 bits (90), Expect(2) = 1e-16
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL R LFP+G + K EVRR+A + LPN +KD F
Sbjct: 164 QLSRTLFPVGELRKTEVRRIAEEIGLPNAKKKDSTGICF 202
[158][TOP]
>UniRef100_A4A3C0 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Congregibacter litoralis KT71 RepID=A4A3C0_9GAMM
Length = 372
Score = 75.5 bits (184), Expect(2) = 1e-16
Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ RF +F+ +++ + GII E GD +G+H G ++TIGQRQGL + G
Sbjct: 195 KDSTGICFIGERRFKDFLQQYLPAQPGIIKTLE-GDTIGEHSGLMYHTIGQRQGLGIGGL 253
Query: 272 -----GPWYVVEKDVKNNVVFV 322
PWYV KD+ NNV+ V
Sbjct: 254 ARHNEAPWYVAGKDLANNVLLV 275
Score = 34.3 bits (77), Expect(2) = 1e-16
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
+L + LFPLG I K EVR LA + L D+KD F
Sbjct: 164 ELSKTLFPLGEIEKPEVRALAERAGLRTHDKKDSTGICF 202
[159][TOP]
>UniRef100_A6SUW6 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Janthinobacterium sp.
Marseille RepID=MNMA_JANMA
Length = 372
Score = 71.2 bits (173), Expect(2) = 1e-16
Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 11/115 (9%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ F EF+ R++ + G + E G +G+H G FYT+GQR+G+ L G
Sbjct: 195 KDSTGICFIGERPFREFLNRYLSYQPGPMKTPE-GVIVGEHVGLSFYTLGQRKGIGLGGM 253
Query: 272 ----------GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PWYV KDV N +++ + + G + W +G PPS
Sbjct: 254 KSHKNTDGNSEPWYVARKDVATNTLYIVQGHDHPWLLSSELSAGQMSWVAGSPPS 308
Score = 38.5 bits (88), Expect(2) = 1e-16
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + LFPLG I K EVR++A + LPN +KD F
Sbjct: 164 QLAKTLFPLGEIRKTEVRKIAEQLKLPNATKKDSTGICF 202
[160][TOP]
>UniRef100_UPI0001826428 hypothetical protein ENTCAN_01901 n=1 Tax=Enterobacter cancerogenus
ATCC 35316 RepID=UPI0001826428
Length = 370
Score = 78.6 bits (192), Expect(2) = 1e-16
Identities = 36/86 (41%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F EF+ R++ + G I+ + GD +G+H+G ++T+GQR+GL + G
Sbjct: 194 KDSTGICFIGERKFREFLGRYLPAQPGKIVTVD-GDEIGQHQGLMYHTLGQRKGLGIGGT 252
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV+NN++ V++ +
Sbjct: 253 KEGSEDPWYVVDKDVENNILIVAQGH 278
Score = 31.2 bits (69), Expect(2) = 1e-16
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K EVR++A DL +KD F
Sbjct: 163 QIAQSLFPVGELEKPEVRKIAEALDLITAKKKDSTGICF 201
[161][TOP]
>UniRef100_UPI00016A58FF tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Burkholderia ubonensis Bu RepID=UPI00016A58FF
Length = 382
Score = 69.7 bits (169), Expect(2) = 2e-16
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTPDGKTVGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + R G++ W +G PP+
Sbjct: 249 KDGSGEPWFVAAKDIPSNTLYVVQGHDHPWLLSRRLVAGNVSWTAGEPPA 298
Score = 39.7 bits (91), Expect(2) = 2e-16
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG IPK +VR +A + LPN +KD F
Sbjct: 159 QLSKTMFPLGEIPKTKVREIAAQIGLPNAKKKDSTGICF 197
[162][TOP]
>UniRef100_B1FWJ3 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Burkholderia graminis C4D1M RepID=B1FWJ3_9BURK
Length = 381
Score = 69.7 bits (169), Expect(2) = 2e-16
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTQPGP-MKTTDGKVVGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V++ + G+ W +G PP+
Sbjct: 249 KDGSGEPWFVAGKDIPSNTLYVAQGHDHPWLLSHTLSAGNTSWVAGEPPA 298
Score = 39.7 bits (91), Expect(2) = 2e-16
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + LFPLG IPK +VR +A + LPN +KD F
Sbjct: 159 QLSKTLFPLGEIPKTKVREIAEQIALPNAKKKDSTGICF 197
[163][TOP]
>UniRef100_A0KW11 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Shewanella sp. ANA-3
RepID=MNMA_SHESA
Length = 372
Score = 75.5 bits (184), Expect(2) = 2e-16
Identities = 37/84 (44%), Positives = 56/84 (66%), Gaps = 6/84 (7%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F+EF+ ++ + G I AE G+ +GKH+G + T+GQR+GL + G
Sbjct: 199 KDSTGICFIGERKFTEFLGNYLPAQPGNIETAE-GEIIGKHQGLMYQTLGQRKGLGIGGM 257
Query: 272 -----GPWYVVEKDVKNNVVFVSR 328
PWYVV+KD+K NV+ V +
Sbjct: 258 KNSNDDPWYVVDKDLKRNVLVVGQ 281
Score = 33.9 bits (76), Expect(2) = 2e-16
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ R LFP+G + K EVR +A K L D+KD F
Sbjct: 168 QVARSLFPVGELEKHEVREIAKKMGLITHDKKDSTGICF 206
[164][TOP]
>UniRef100_Q0A8N7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Alkalilimnicola
ehrlichii MLHE-1 RepID=MNMA_ALHEH
Length = 366
Score = 72.4 bits (176), Expect(2) = 2e-16
Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
+ S GICF+G+ F F++R+I G +E G +G+H+G FYT+GQR+GL L G
Sbjct: 191 RDSTGICFIGERDFRAFLSRYIQRSPGP-METPEGQVVGEHQGLAFYTLGQRRGLGLGGL 249
Query: 272 -----GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
G WYV +KD+ N + V + + L W +G PP+
Sbjct: 250 PDHDEGAWYVADKDMARNALIVVQGHAHPRLLSTALVADELSWVAGAPPT 299
Score = 37.0 bits (84), Expect(2) = 2e-16
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL+ LFPL +PK EVRR A LPN R+D F
Sbjct: 160 QLRHSLFPLSELPKPEVRRQAAAAGLPNHARRDSTGICF 198
[165][TOP]
>UniRef100_B8GSL9 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSL9_THISH
Length = 364
Score = 80.5 bits (197), Expect(2) = 2e-16
Identities = 43/109 (39%), Positives = 64/109 (58%), Gaps = 6/109 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ RF +F+ ++ R G I++ E G+ LG+H+G +YT+GQRQGL + G
Sbjct: 191 KDSTGICFIGERRFRDFLQTYLPARPGEIVDPE-GNRLGEHQGLMYYTLGQRQGLGIGGV 249
Query: 272 -----GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPP 403
PWYVV+KD+ +N + V++ + R L W SG P
Sbjct: 250 HDAGEAPWYVVDKDMAHNRLIVAQGHDHPLMHHRGLEAQDLHWVSGEAP 298
Score = 28.9 bits (63), Expect(2) = 2e-16
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + LFP+G + K VR LA LP +KD F
Sbjct: 160 QLSKSLFPIGELEKPRVRDLARAHGLPVFAKKDSTGICF 198
[166][TOP]
>UniRef100_D0BKH6 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Granulicatella elegans ATCC 700633
RepID=D0BKH6_9LACT
Length = 374
Score = 72.0 bits (175), Expect(2) = 2e-16
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 5/85 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S G+CF+G+ F+EF++ ++ + G ++ + G+ G H G +YTIGQRQGL + GG
Sbjct: 193 KDSTGVCFIGERNFNEFLSHYLPAKPGKMVTLD-GEVKGDHAGLMYYTIGQRQGLGIGGG 251
Query: 275 -----PWYVVEKDVKNNVVFVSRNY 334
PW+VV KD+ N ++V + +
Sbjct: 252 GKTNDPWFVVGKDLSTNTLYVGQGF 276
Score = 37.0 bits (84), Expect(2) = 2e-16
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FP+G + K EVR++A +FDL +KD F
Sbjct: 162 QLSKAMFPIGHLEKKEVRKIAEEFDLATAKKKDSTGVCF 200
[167][TOP]
>UniRef100_A4W9E5 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Enterobacter sp. 638
RepID=MNMA_ENT38
Length = 369
Score = 77.8 bits (190), Expect(2) = 2e-16
Identities = 36/86 (41%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F EF+ R++ + G I+ + GD +G+H+G ++T+GQR+GL + G
Sbjct: 193 KDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDDVGEHQGLMYHTLGQRKGLGIGGT 251
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV+NN++ V++ +
Sbjct: 252 KEGSEEPWYVVDKDVENNILVVAQGH 277
Score = 31.2 bits (69), Expect(2) = 2e-16
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K EVR++A DL +KD F
Sbjct: 162 QIVQSLFPVGELEKPEVRKIAENLDLITAKKKDSTGICF 200
[168][TOP]
>UniRef100_C4ZKC3 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Thauera sp. MZ1T RepID=C4ZKC3_THASP
Length = 365
Score = 76.3 bits (186), Expect(2) = 2e-16
Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 11/114 (9%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ F EF+ R++ R G I + G LG+H+G ++TIGQR+GL + G
Sbjct: 191 KDSTGICFIGERPFREFLMRYLPTRPGEIRALDDGRVLGEHQGLMYHTIGQRKGLHIGGL 250
Query: 272 ----------GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPP 403
WYV KDVK NV++V + + + G L W +G P
Sbjct: 251 KGNQDEAGEHEAWYVAGKDVKANVLYVVQGHAHPALLKDRLVAGDLNWIAGRDP 304
Score = 32.7 bits (73), Expect(2) = 2e-16
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG + K EVRR+A + L ++KD F
Sbjct: 160 QLAKTMFPLGALYKREVRRIAAEAGLHVAEKKDSTGICF 198
[169][TOP]
>UniRef100_A0Z1Z4 TRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=marine gamma proteobacterium HTCC2080
RepID=A0Z1Z4_9GAMM
Length = 363
Score = 78.2 bits (191), Expect(2) = 2e-16
Identities = 42/110 (38%), Positives = 63/110 (57%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ RF +F+ +++ + G+I E G LG+H+G ++TIGQRQGL + G
Sbjct: 193 KDSTGICFIGERRFKDFLQQYLPAQPGVI-EDTNGQALGEHQGLMYHTIGQRQGLGIGGL 251
Query: 272 -----GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PWYVVEK V+ NV+ V++ + +L W S P+
Sbjct: 252 ADRNAAPWYVVEKHVERNVLIVAQGNDHPRLYKHSLHASTLFWISEQAPT 301
Score = 30.8 bits (68), Expect(2) = 2e-16
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
+L R LFP+G + K EVR++A + L +KD F
Sbjct: 162 ELSRSLFPVGDLAKPEVRKIAEQAGLTTARKKDSTGICF 200
[170][TOP]
>UniRef100_A1U1H5 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Marinobacter aquaeolei
VT8 RepID=MNMA_MARAV
Length = 392
Score = 77.4 bits (189), Expect(2) = 3e-16
Identities = 42/110 (38%), Positives = 63/110 (57%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F++F+ +++ + G I E G +GKH+G ++TIGQRQGL + G
Sbjct: 202 KDSTGICFIGERKFTDFLKQYLPAQPGNI-ETPDGTVIGKHQGLMYHTIGQRQGLGIGGL 260
Query: 272 -----GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PWYV EKD+K NV+ + R G + W +G PP+
Sbjct: 261 AEFGDEPWYVAEKDLKRNVLIAVQGKHHPLLFSRGLVSGPVDWVAGEPPA 310
Score = 31.2 bits (69), Expect(2) = 3e-16
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
++ R LFP+G + K EVRR+A + D+KD F
Sbjct: 171 RIARTLFPVGELEKPEVRRIAEEQGFVTHDKKDSTGICF 209
[171][TOP]
>UniRef100_C8NEJ7 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Granulicatella adiacens ATCC 49175
RepID=C8NEJ7_9LACT
Length = 374
Score = 71.6 bits (174), Expect(2) = 3e-16
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 5/85 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S G+CF+G+ F+EF++ ++ + G ++ + G+ G H G +YTIGQRQGL + GG
Sbjct: 193 KDSTGVCFIGERNFNEFLSNYLPAKPGKMVTLD-GEVKGDHAGLMYYTIGQRQGLGIGGG 251
Query: 275 -----PWYVVEKDVKNNVVFVSRNY 334
PW+V+ KD+ N ++V + +
Sbjct: 252 GKTNDPWFVIGKDLSTNTLYVGQGF 276
Score = 37.0 bits (84), Expect(2) = 3e-16
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL++ +FP+G + K EVR +A K+DL +KD F
Sbjct: 162 QLEKAMFPIGHLEKKEVREIAEKYDLATAKKKDSTGVCF 200
[172][TOP]
>UniRef100_A0YBV7 TRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=marine gamma proteobacterium HTCC2143
RepID=A0YBV7_9GAMM
Length = 372
Score = 77.0 bits (188), Expect(2) = 3e-16
Identities = 38/99 (38%), Positives = 62/99 (62%), Gaps = 6/99 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ RF +F+ +++ + G+I + + G +G H G ++TIGQRQGL + G
Sbjct: 198 KDSTGICFIGERRFKDFLQQYLPAQPGMIEDTD-GSIMGGHSGLMYHTIGQRQGLGIGGV 256
Query: 272 -----GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVG 373
PWYVV+KD+K NV+ +++ + R+F+ G
Sbjct: 257 SGAGDAPWYVVDKDLKRNVLIIAQG----SQHHRLFKQG 291
Score = 31.6 bits (70), Expect(2) = 3e-16
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
++ + LFP+G + K +VR +A K+ L ++KD F
Sbjct: 167 EIAKTLFPVGDLEKPDVRAIAEKYSLTTHNKKDSTGICF 205
[173][TOP]
>UniRef100_Q2C5M4 TRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Photobacterium sp. SKA34 RepID=Q2C5M4_9GAMM
Length = 371
Score = 75.1 bits (183), Expect(2) = 3e-16
Identities = 34/86 (39%), Positives = 58/86 (67%), Gaps = 8/86 (9%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F+EF+ +++ + G I+ A+ G +G+H+G ++T+GQR+GL + G
Sbjct: 197 KDSTGICFIGERKFTEFLGKYLPAQPGKIVTADEGKEIGEHQGLMYHTLGQRKGLLIGGQ 256
Query: 272 -------GPWYVVEKDVKNNVVFVSR 328
WYVV+KDVK+N++ V +
Sbjct: 257 KGGNGHEDAWYVVDKDVKSNLLIVGQ 282
Score = 33.5 bits (75), Expect(2) = 3e-16
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ R LFP+G + K EVRR+A + DL +KD F
Sbjct: 166 QIARSLFPVGELEKPEVRRIAEEQDLITAKKKDSTGICF 204
[174][TOP]
>UniRef100_UPI0001693FC7 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Paenibacillus larvae subsp. larvae BRL-230010
RepID=UPI0001693FC7
Length = 364
Score = 73.6 bits (179), Expect(2) = 3e-16
Identities = 37/111 (33%), Positives = 64/111 (57%), Gaps = 8/111 (7%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S G+CF+G+ F EF++ ++ + G + E G+ G+H G +YT+GQRQGL + G
Sbjct: 191 KDSTGVCFIGERNFKEFLSNYLPAKPGEMRTLE-GEVKGRHDGLMYYTLGQRQGLGIGGS 249
Query: 275 ----PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVG----SLKWFSGLPP 403
PW+V +KD++NN+++V + +K ++ G + W S + P
Sbjct: 250 GTGEPWFVADKDLQNNILYVVQG----EKHPSLYSTGLSATDVNWISPVKP 296
Score = 35.0 bits (79), Expect(2) = 3e-16
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FP+G +PK EVR+LA + L +KD F
Sbjct: 160 QLSKAMFPIGHLPKPEVRKLAEEAGLATAKKKDSTGVCF 198
[175][TOP]
>UniRef100_Q3RBJ7 TRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Xylella fastidiosa subsp. sandyi Ann-1
RepID=Q3RBJ7_XYLFA
Length = 379
Score = 77.0 bits (188), Expect(2) = 4e-16
Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 6/111 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--- 265
K S GICF+G+ F EF+ +++ + G I + + + +H G +++T+GQRQGL +
Sbjct: 189 KDSTGICFIGERNFREFLKQYLPAQPGEIRDPQE-QRIAEHPGVFYFTLGQRQGLNIGGV 247
Query: 266 ---PGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPSP 409
P PWYV+ KD+ NV++V ++ S + R R W SG PP+P
Sbjct: 248 RNRPPSPWYVIGKDLATNVLYVDQHRDSPFLQSRWLRSEPAHWVSGSPPAP 298
Score = 31.2 bits (69), Expect(2) = 4e-16
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL LFP+G + K ++R+LA + LP +KD F
Sbjct: 158 QLAATLFPIGDLEKQQLRQLAHQTGLPTHAKKDSTGICF 196
[176][TOP]
>UniRef100_B2I9X8 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Xylella fastidiosa
RepID=MNMA_XYLF2
Length = 379
Score = 77.0 bits (188), Expect(2) = 4e-16
Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 6/111 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--- 265
K S GICF+G+ F EF+ +++ + G I + + + +H G +++T+GQRQGL +
Sbjct: 189 KDSTGICFIGERNFREFLKQYLPAQPGEIRDPQE-QRIAEHPGVFYFTLGQRQGLNIGGV 247
Query: 266 ---PGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPSP 409
P PWYV+ KD+ NV++V ++ S + R R W SG PP+P
Sbjct: 248 RNRPPSPWYVIGKDLATNVLYVDQHRDSPFLQSRWLRSEPAHWVSGSPPAP 298
Score = 31.2 bits (69), Expect(2) = 4e-16
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL LFP+G + K ++R+LA + LP +KD F
Sbjct: 158 QLAATLFPIGDLEKQQLRQLAHQTGLPTHAKKDSTGICF 196
[177][TOP]
>UniRef100_A6F8N7 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Moritella sp. PE36 RepID=A6F8N7_9GAMM
Length = 379
Score = 76.6 bits (187), Expect(2) = 4e-16
Identities = 41/113 (36%), Positives = 69/113 (61%), Gaps = 11/113 (9%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F+EF+++++ + G I E+ G+ +G+H+G ++T+GQR+GL + G
Sbjct: 205 KDSTGICFIGERKFTEFLSKYLPAQPGKI-ESVDGEEIGEHQGLMYHTLGQRKGLHIGGM 263
Query: 272 ------GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVG----SLKWFSGLP 400
PWYVV+KD++ NV+ V++ + R+F G L W S P
Sbjct: 264 KNNNNQEPWYVVDKDMERNVLLVAQGH----NHPRLFSTGLMASQLHWISREP 312
Score = 31.6 bits (70), Expect(2) = 4e-16
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ R LFP+G + K EVRR+A + L ++KD F
Sbjct: 174 QVSRSLFPVGELEKPEVRRIAEEQGLITANKKDSTGICF 212
[178][TOP]
>UniRef100_Q6LT18 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Photobacterium profundum
RepID=MNMA_PHOPR
Length = 377
Score = 74.7 bits (182), Expect(2) = 4e-16
Identities = 34/86 (39%), Positives = 56/86 (65%), Gaps = 8/86 (9%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F+EF+ +++ + G I A+ G +G+H+G ++T+GQR+GL + G
Sbjct: 203 KDSTGICFIGERKFTEFLGKYLPAQPGKIETADEGKVIGEHQGLMYHTLGQRKGLHIGGQ 262
Query: 272 -------GPWYVVEKDVKNNVVFVSR 328
WYVV+KD+K NV+ V +
Sbjct: 263 KGGNGLEDAWYVVDKDLKRNVLIVGQ 288
Score = 33.5 bits (75), Expect(2) = 4e-16
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ R LFP+G + K EVRR+A + DL +KD F
Sbjct: 172 QIARSLFPVGELEKPEVRRIAEEQDLITAKKKDSTGICF 210
[179][TOP]
>UniRef100_Q1Z146 TRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Photobacterium profundum 3TCK RepID=Q1Z146_PHOPR
Length = 371
Score = 74.7 bits (182), Expect(2) = 4e-16
Identities = 34/86 (39%), Positives = 56/86 (65%), Gaps = 8/86 (9%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F+EF+ +++ + G I A+ G +G+H+G ++T+GQR+GL + G
Sbjct: 197 KDSTGICFIGERKFTEFLGKYLPAQPGKIETADEGKVIGEHQGLMYHTLGQRKGLHIGGQ 256
Query: 272 -------GPWYVVEKDVKNNVVFVSR 328
WYVV+KD+K NV+ V +
Sbjct: 257 KGGNGLEDAWYVVDKDLKRNVLIVGQ 282
Score = 33.5 bits (75), Expect(2) = 4e-16
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ R LFP+G + K EVRR+A + DL +KD F
Sbjct: 166 QIARSLFPVGELEKPEVRRIAEEQDLITAKKKDSTGICF 204
[180][TOP]
>UniRef100_Q2B0W2 TrmU n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B0W2_9BACI
Length = 370
Score = 73.9 bits (180), Expect(2) = 4e-16
Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--P 268
K S GICF+G+ F EF+ ++ + G +E G+ +G+H G +YTIGQR GL +
Sbjct: 194 KDSTGICFIGERNFKEFLGNYLPAQPGS-METMEGETVGRHDGLMYYTIGQRHGLGIGGA 252
Query: 269 GGPWYVVEKDVKNNVVFVSRNY 334
G PW+V+ KD+K NV++V + +
Sbjct: 253 GDPWFVIGKDLKRNVLYVGQGF 274
Score = 34.3 bits (77), Expect(2) = 4e-16
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL +++FP+G I K EVR +A K L +KD F
Sbjct: 163 QLSKVMFPIGSIEKSEVREIAKKAGLATAAKKDSTGICF 201
[181][TOP]
>UniRef100_C0N992 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Methylophaga thiooxidans DMS010 RepID=C0N992_9GAMM
Length = 367
Score = 69.3 bits (168), Expect(2) = 4e-16
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 6/82 (7%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--- 265
K S GICF+G+ F EF++R+I + G + G+ +G+H G +YT+GQRQGL +
Sbjct: 191 KDSTGICFIGERHFREFLSRYIPAQPGE-MRTPDGEKIGEHAGLMYYTLGQRQGLGIGGR 249
Query: 266 ---PGGPWYVVEKDVKNNVVFV 322
G PW+V KD++N +++V
Sbjct: 250 KNSTGEPWFVAGKDMENRILYV 271
Score = 38.9 bits (89), Expect(2) = 4e-16
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL R LFPLG +PK EVR++A + N D+KD F
Sbjct: 160 QLSRTLFPLGELPKTEVRQIAEQAGFINHDKKDSTGICF 198
[182][TOP]
>UniRef100_C6SJM0 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Neisseria meningitidis alpha275 RepID=C6SJM0_NEIME
Length = 367
Score = 65.9 bits (159), Expect(2) = 4e-16
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F EF+ +++ G ++ E G +G+H G FYT+GQR+GL + GG
Sbjct: 194 KDSTGICFIGERPFREFLQKYLPTDNGKMVTPE-GKTVGEHVGLMFYTLGQRKGLGIGGG 252
Query: 275 --PWYVVEKDVKNNVVFVSRNY 334
PW+V KD+ N + V + +
Sbjct: 253 GEPWFVAAKDLTKNELIVVQGH 274
Score = 42.4 bits (98), Expect(2) = 4e-16
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL+R +FPLG + K EVRRLA +F+LP +KD F
Sbjct: 163 QLERAIFPLGGLEKPEVRRLAAEFNLPTAAKKDSTGICF 201
[183][TOP]
>UniRef100_C6SAQ8 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Neisseria meningitidis alpha153 RepID=C6SAQ8_NEIME
Length = 367
Score = 65.9 bits (159), Expect(2) = 4e-16
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F EF+ +++ G ++ E G +G+H G FYT+GQR+GL + GG
Sbjct: 194 KDSTGICFIGERPFREFLQKYLPTDNGKMVTPE-GKTVGEHVGLMFYTLGQRKGLGIGGG 252
Query: 275 --PWYVVEKDVKNNVVFVSRNY 334
PW+V KD+ N + V + +
Sbjct: 253 GEPWFVAAKDLTKNELIVVQGH 274
Score = 42.4 bits (98), Expect(2) = 4e-16
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL+R +FPLG + K EVRRLA +F+LP +KD F
Sbjct: 163 QLERAIFPLGGLEKPEVRRLAAEFNLPTAAKKDSTGICF 201
[184][TOP]
>UniRef100_Q9JTJ9 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Neisseria meningitidis
serogroup A RepID=MNMA_NEIMA
Length = 367
Score = 65.9 bits (159), Expect(2) = 4e-16
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F EF+ +++ G ++ E G +G+H G FYT+GQR+GL + GG
Sbjct: 194 KDSTGICFIGERPFREFLQKYLPTDNGKMVTPE-GKTVGEHVGLMFYTLGQRKGLGIGGG 252
Query: 275 --PWYVVEKDVKNNVVFVSRNY 334
PW+V KD+ N + V + +
Sbjct: 253 GEPWFVAAKDLTKNELMVVQGH 274
Score = 42.4 bits (98), Expect(2) = 4e-16
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL+R +FPLG + K EVRRLA +F+LP +KD F
Sbjct: 163 QLERAIFPLGGLEKPEVRRLAAEFNLPTAAKKDSTGICF 201
[185][TOP]
>UniRef100_UPI00016B2149 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=candidate division TM7 single-cell isolate TM7c
RepID=UPI00016B2149
Length = 340
Score = 84.7 bits (208), Expect(2) = 4e-16
Identities = 43/103 (41%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICF+GKI EF+++++ + G I++ +TG +G H G FYTIGQR GL + GG
Sbjct: 183 KDSQGICFVGKIGIREFLSQYVDTKPGDIIDQKTGKKIGTHDGAIFYTIGQRHGLNIGGG 242
Query: 275 -PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLP 400
P+YVV K++++N V+VS + R ++ S W + +P
Sbjct: 243 LPYYVVGKNMQSNEVYVSNDINHNGIWRSETKIESKHWINNVP 285
Score = 23.5 bits (49), Expect(2) = 4e-16
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 6 LKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
L + FPLG K +VR+++ L +KD + F
Sbjct: 153 LSKTFFPLGEYTKQKVRQMSEDRHLFTAKKKDSQGICF 190
[186][TOP]
>UniRef100_A9U803 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9U803_PHYPA
Length = 257
Score = 73.6 bits (179), Expect(2) = 4e-16
Identities = 30/77 (38%), Positives = 52/77 (67%), Gaps = 4/77 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S G+CF+G+ F EF+++++ + G +++ TG+ G+H G +YT+GQRQGL + G
Sbjct: 181 KDSTGVCFIGERNFKEFLSQYLPAQSGQMVDIATGEVKGRHDGLMYYTLGQRQGLGIGGS 240
Query: 275 ----PWYVVEKDVKNNV 313
PW+V +KD++ N+
Sbjct: 241 GSGEPWFVADKDLEKNI 257
Score = 34.7 bits (78), Expect(2) = 4e-16
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FP+G +PK EVRR+A + L +KD F
Sbjct: 150 QLSKAMFPIGHLPKPEVRRIAEEAGLYTAKKKDSTGVCF 188
[187][TOP]
>UniRef100_A2SLT0 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Methylibium
petroleiphilum PM1 RepID=MNMA_METPP
Length = 396
Score = 69.3 bits (168), Expect(2) = 5e-16
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 13/118 (11%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ F EF+ R++ G I + E G LG+H G FYT+GQR+G+ + G
Sbjct: 219 KDSTGICFIGERPFREFLNRYLAHAPGPIKD-ERGRTLGEHVGLSFYTLGQRKGIGIGGV 277
Query: 272 ------------GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPSP 409
PW+V KD +N ++V + + + W +G PP+P
Sbjct: 278 KERGAARGGADHAPWFVARKDRPHNTLYVVQGHDHPWLQSFRLEADDASWIAGTPPAP 335
Score = 38.5 bits (88), Expect(2) = 5e-16
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL R LFP+G +PK EVRR+A + LP +KD F
Sbjct: 188 QLARTLFPVGELPKTEVRRIAAEIRLPVAAKKDSTGICF 226
[188][TOP]
>UniRef100_A6W0E1 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Marinomonas sp. MWYL1
RepID=MNMA_MARMS
Length = 390
Score = 73.9 bits (180), Expect(2) = 5e-16
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 6/84 (7%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ RF +F+ +++ + G I E GD + +H G ++TIGQRQGL + G
Sbjct: 217 KDSTGICFIGERRFKDFLEQYLPAQPGDI-ETLEGDKIARHHGLMYHTIGQRQGLGIGGL 275
Query: 272 -----GPWYVVEKDVKNNVVFVSR 328
PWYVVEKD++ NV+ V++
Sbjct: 276 AKYSDDPWYVVEKDLERNVLIVTQ 299
Score = 33.9 bits (76), Expect(2) = 5e-16
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
++ + LFP+G + K EVRRLA +F L ++KD F
Sbjct: 186 EIAKTLFPVGELEKTEVRRLAEEFGLITHNKKDSTGICF 224
[189][TOP]
>UniRef100_C5SAS7 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Allochromatium vinosum DSM 180 RepID=C5SAS7_CHRVI
Length = 371
Score = 73.6 bits (179), Expect(2) = 5e-16
Identities = 46/114 (40%), Positives = 60/114 (52%), Gaps = 11/114 (9%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ RFS+F+AR++ G I E G LG+H G +YT+GQRQGL + G
Sbjct: 198 KDSTGICFIGERRFSDFLARYLPREPGPI-ETPEGVRLGEHHGLAYYTLGQRQGLGIGGV 256
Query: 272 -----GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLK-----WFSGLPP 403
PWYV KD NN + V + D R + L+ W SG P
Sbjct: 257 SQGREAPWYVAVKDSANNRLIVVQ-----DSRHPLLMSTGLEALQPHWISGRAP 305
Score = 34.3 bits (77), Expect(2) = 5e-16
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL R LFPL + K EVR LA + L N +KD F
Sbjct: 167 QLSRALFPLADLTKGEVRALARRLGLANAAKKDSTGICF 205
[190][TOP]
>UniRef100_B5RVU9 Probable trna
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
protein n=1 Tax=Ralstonia solanacearum
RepID=B5RVU9_RALSO
Length = 370
Score = 66.6 bits (161), Expect(2) = 5e-16
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G I E G +G+H G FYT+GQR+G+ + G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTKPGPIKTPE-GKTIGQHIGLAFYTLGQRKGIGIGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
WYV KD+ N ++V + + L W +G PP+
Sbjct: 249 RDGNGDAWYVARKDMAANTLYVVQGHDHPWLLAHTVHADDLSWVAGHPPA 298
Score = 41.2 bits (95), Expect(2) = 5e-16
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL R LFPLG IPK VR +A + LPN +KD F
Sbjct: 159 QLSRTLFPLGEIPKTRVREIAAEIGLPNAKKKDSTGICF 197
[191][TOP]
>UniRef100_A3RRY9 TRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=2
Tax=Ralstonia solanacearum RepID=A3RRY9_RALSO
Length = 370
Score = 66.6 bits (161), Expect(2) = 5e-16
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G I E G +G+H G FYT+GQR+G+ + G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTKPGPIKTPE-GKTIGQHIGLAFYTLGQRKGIGIGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
WYV KD+ N ++V + + L W +G PP+
Sbjct: 249 RDGNGDAWYVARKDMAANTLYVVQGHDHPWLLAHTVHADDLSWVAGHPPA 298
Score = 41.2 bits (95), Expect(2) = 5e-16
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL R LFPLG IPK VR +A + LPN +KD F
Sbjct: 159 QLSRTLFPLGEIPKTRVREIAAEIGLPNAKKKDSTGICF 197
[192][TOP]
>UniRef100_C6MJ10 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Nitrosomonas sp. AL212 RepID=C6MJ10_9PROT
Length = 359
Score = 70.9 bits (172), Expect(2) = 5e-16
Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ F EF+ R++ G I + G +G+H G +YTIGQRQGL + G
Sbjct: 190 KDSTGICFIGERPFREFLNRYLPHEPGEI-QTTDGKVIGEHIGLMYYTIGQRQGLGIGGI 248
Query: 272 -----GPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPP 403
PW+V KD+ NV+ V + + D R + L W P
Sbjct: 249 RNGGDEPWFVAAKDMNRNVLIVVQGHNHPDLFRPSLKAIDLSWIDDKQP 297
Score = 37.0 bits (84), Expect(2) = 5e-16
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + LFP+G + K EVR++A + LPN +KD F
Sbjct: 159 QLAKSLFPIGHLYKREVRKIARELKLPNSSKKDSTGICF 197
[193][TOP]
>UniRef100_Q1LJ45 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Ralstonia metallidurans
CH34 RepID=MNMA_RALME
Length = 359
Score = 66.6 bits (161), Expect(2) = 5e-16
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--- 265
K S GICF+G+ F +F+ R++ + G + E G +G+H G FYT+GQR+G+ L
Sbjct: 191 KDSTGICFIGERPFRDFLNRYLPTQPGPMKTPE-GKVVGEHIGLAFYTLGQRKGIGLGGS 249
Query: 266 ---PGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
G WYV KD+ +N ++V + + L W +G PP+
Sbjct: 250 RDGSGDAWYVARKDMASNTLYVVQGHDHPWLLTSELNAADLSWVAGEPPA 299
Score = 41.2 bits (95), Expect(2) = 5e-16
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL R LFPLG IPK VR +A + LPN +KD F
Sbjct: 160 QLSRTLFPLGEIPKTRVREIAAEIGLPNAKKKDSTGICF 198
[194][TOP]
>UniRef100_B5WLZ7 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Burkholderia sp. H160 RepID=B5WLZ7_9BURK
Length = 416
Score = 67.0 bits (162), Expect(2) = 6e-16
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTTDGKTVGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+ KD+ N ++V++ + G+ W +G PP+
Sbjct: 249 KDGSGEPWFAAGKDIPTNTLYVAQGHDHPWLLCHTLSAGNTSWVAGEPPA 298
Score = 40.4 bits (93), Expect(2) = 6e-16
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + LFPLG IPK +VR +A + LPN +KD F
Sbjct: 159 QLSKTLFPLGEIPKTKVREIAAQIGLPNAKKKDSTGICF 197
[195][TOP]
>UniRef100_UPI000196EC85 hypothetical protein NEICINOT_00321 n=1 Tax=Neisseria cinerea ATCC
14685 RepID=UPI000196EC85
Length = 367
Score = 65.1 bits (157), Expect(2) = 6e-16
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F EF+ +++ G ++ E G +GKH G FYT+GQR+GL + G
Sbjct: 194 KDSTGICFIGERPFREFLQKYLPTDNGKMVTPE-GKTVGKHVGLMFYTLGQRKGLGIGGA 252
Query: 275 --PWYVVEKDVKNNVVFVSRNY 334
PW+V KD+ N + V + +
Sbjct: 253 GEPWFVAAKDLTKNELIVVQGH 274
Score = 42.4 bits (98), Expect(2) = 6e-16
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL+R +FPLG + K EVRRLA +F+LP +KD F
Sbjct: 163 QLERAIFPLGGLEKPEVRRLAAEFNLPTAAKKDSTGICF 201
[196][TOP]
>UniRef100_B6BUR7 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=beta proteobacterium KB13 RepID=B6BUR7_9PROT
Length = 364
Score = 70.5 bits (171), Expect(2) = 6e-16
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--- 265
K S GICF+G+ F+EF+ + I + G I+ + G +GKH G FYT+GQRQGL +
Sbjct: 190 KDSTGICFIGERPFAEFLNQFIPKNPGDIVTVD-GKNIGKHNGLTFYTVGQRQGLGIGGT 248
Query: 266 ---PGGPWYVVEKDVKNNVVFVSR 328
G PW+V +KD+K N + V++
Sbjct: 249 SSGSGEPWFVAKKDMKENQLIVAQ 272
Score = 37.0 bits (84), Expect(2) = 6e-16
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG I K +VR++A + +L N DRKD F
Sbjct: 159 QLSKSIFPLGKILKSDVRKIAKENNLHNHDRKDSTGICF 197
[197][TOP]
>UniRef100_Q9PDD9 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Xylella fastidiosa
RepID=MNMA_XYLFA
Length = 379
Score = 77.0 bits (188), Expect(2) = 8e-16
Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 6/111 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--- 265
K S GICF+G+ F EF+ +++ + G I + + + +H G +++T+GQRQGL +
Sbjct: 189 KDSTGICFIGERNFREFLKQYLPAQPGEIRDPQE-QRIAEHPGVFYFTLGQRQGLNIGGV 247
Query: 266 ---PGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPSP 409
P PWYV+ KD+ NV++V ++ S + R R W SG PP+P
Sbjct: 248 RNRPPSPWYVIGKDLATNVLYVDQHRDSPFLQSRWLRSEPAHWVSGSPPAP 298
Score = 30.0 bits (66), Expect(2) = 8e-16
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL +FP+G + K ++R+LA + LP +KD F
Sbjct: 158 QLAATMFPIGDLEKPQLRQLAHQAGLPTHAKKDSTGICF 196
[198][TOP]
>UniRef100_A4VLW2 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Pseudomonas stutzeri
A1501 RepID=MNMA_PSEU5
Length = 375
Score = 75.1 bits (183), Expect(2) = 8e-16
Identities = 37/84 (44%), Positives = 56/84 (66%), Gaps = 6/84 (7%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ RFS+F+ +++ + G I EA G+ +G+H G ++TIGQRQGL + G
Sbjct: 198 KDSTGICFIGERRFSDFLKQYLPAQPGNI-EAVDGEVIGRHHGLMYHTIGQRQGLGIGGL 256
Query: 272 -----GPWYVVEKDVKNNVVFVSR 328
PWYV+ KD++ NV+ V +
Sbjct: 257 KDASDEPWYVLSKDLQRNVLIVGQ 280
Score = 32.0 bits (71), Expect(2) = 8e-16
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + LFP+G + K EVR +A K L +KD F
Sbjct: 167 QLAKTLFPVGELEKPEVRAIAEKHSLATAKKKDSTGICF 205
[199][TOP]
>UniRef100_C6QJS7 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Geobacillus sp. Y4.1MC1 RepID=C6QJS7_9BACI
Length = 370
Score = 71.6 bits (174), Expect(2) = 8e-16
Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--- 265
K S GICF+G+ F F+ + + G I + G+ LG H G +YTIGQR+GL +
Sbjct: 190 KDSTGICFIGERNFKRFLKNFLPAQPGEIRSLD-GEVLGTHDGLMYYTIGQRKGLGIGGK 248
Query: 266 -PGGPWYVVEKDVKNNVVFVSR 328
G PWYVV+KD++NNV+ V++
Sbjct: 249 GTGEPWYVVDKDLENNVLLVAQ 270
Score = 35.4 bits (80), Expect(2) = 8e-16
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 6 LKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
L ++LFPLG + KDEVR++A + +L ++KD F
Sbjct: 160 LAKVLFPLGELTKDEVRKIAKELNLVTANKKDSTGICF 197
[200][TOP]
>UniRef100_C5AB39 TRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Burkholderia glumae BGR1 RepID=C5AB39_BURGB
Length = 393
Score = 68.9 bits (167), Expect(2) = 1e-15
Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ R G + G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTRPGP-MRTPDGRRVGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V++ + G++ W +G PP+
Sbjct: 249 RDGSGEPWFVAGKDIASNTLYVAQGHDHPWLLSHELVAGNVSWVAGEPPA 298
Score = 37.7 bits (86), Expect(2) = 1e-15
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + FPLG +PK +VR +A + LPN +KD F
Sbjct: 159 QLSKTRFPLGEMPKTQVREIAARIGLPNAKKKDSTGICF 197
[201][TOP]
>UniRef100_B3R0K5 tRNA (5-methylaminomethyl-2-thioruidylate) methyltransferase n=1
Tax=Candidatus Phytoplasma mali AT RepID=B3R0K5_PHYMT
Length = 385
Score = 68.6 bits (166), Expect(2) = 1e-15
Identities = 34/83 (40%), Positives = 55/83 (66%), Gaps = 5/83 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ RF +F+ ++ + G + + + G +L +HRG +YTIGQR+GL L G
Sbjct: 200 KDSTGICFIGERRFFDFLKNYLPMKPGKMKKLD-GTYLKEHRGTIYYTIGQRKGLGLGGC 258
Query: 272 ----GPWYVVEKDVKNNVVFVSR 328
PW+VV K++K N+++V +
Sbjct: 259 QFNQSPWFVVGKNLKKNILYVEQ 281
Score = 38.1 bits (87), Expect(2) = 1e-15
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QLK+++FPLG + K EVR +A K L N ++KD F
Sbjct: 169 QLKKIIFPLGNLTKPEVREIAKKAGLINANKKDSTGICF 207
[202][TOP]
>UniRef100_C2D1Z8 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Lactobacillus brevis subsp. gravesensis ATCC 27305
RepID=C2D1Z8_LACBR
Length = 374
Score = 71.2 bits (173), Expect(2) = 1e-15
Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ ++ G ++ + G+ G+H G +YTIGQR+GL + G
Sbjct: 194 KDSVGICFIGEKNFKQFLGHYLPATPGKMMTVD-GEVKGQHDGLMYYTIGQRRGLGIGGD 252
Query: 275 -----PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGL 397
PW+VV KD+K N+++V + Y + + W + L
Sbjct: 253 GVDNQPWFVVGKDLKKNILYVGKGYHNELLYADYLEASDIHWVNNL 298
Score = 35.4 bits (80), Expect(2) = 1e-15
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKD 101
QL R++FP+G + K EVR +A K L D+KD
Sbjct: 163 QLDRVMFPIGNLVKPEVREIARKAGLATADKKD 195
[203][TOP]
>UniRef100_C2C1T8 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Listeria grayi DSM 20601 RepID=C2C1T8_LISGR
Length = 370
Score = 73.2 bits (178), Expect(2) = 1e-15
Identities = 35/82 (42%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--P 268
K S GICF+G+ F +F++ ++ + G + TG +GKH G +YTIGQR GL +
Sbjct: 193 KDSTGICFIGERNFKQFLSEYLPAQPGE-MRTLTGKRMGKHDGLMYYTIGQRHGLGIGGD 251
Query: 269 GGPWYVVEKDVKNNVVFVSRNY 334
G PW+V KD++NNV+FV + +
Sbjct: 252 GEPWFVAGKDLENNVLFVEQGF 273
Score = 33.5 bits (75), Expect(2) = 1e-15
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL +++FPLG + K EVR +A K L ++KD F
Sbjct: 162 QLSKVMFPLGGMEKSEVRDIAQKAGLATANKKDSTGICF 200
[204][TOP]
>UniRef100_A4SZU5 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1
RepID=MNMA_POLSQ
Length = 370
Score = 67.8 bits (164), Expect(2) = 1e-15
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F EF+ R++ G I E G +G+H G F+T+GQR+G+ L G
Sbjct: 201 KDSTGICFIGERPFREFLNRYLPRVPGPIKTPE-GKTVGEHMGLAFFTLGQRKGIGLGGS 259
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPSP 409
WYV KD+ NN ++V++ + W SG P P
Sbjct: 260 QDGNGDAWYVARKDMANNTLYVAQGHEHPWLLANKLSAVDASWVSGAAPEP 310
Score = 38.9 bits (89), Expect(2) = 1e-15
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL +++FPLG IPK EVR++A + L N +KD F
Sbjct: 170 QLSKVMFPLGEIPKTEVRKIAEQIGLHNAKKKDSTGICF 208
[205][TOP]
>UniRef100_C3X562 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Oxalobacter formigenes
HOxBLS RepID=C3X562_OXAFO
Length = 369
Score = 67.4 bits (163), Expect(2) = 1e-15
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGL----- 259
K S GICF+G+ F F+ R++ G I E GD +G+H G FYTIGQR+G+
Sbjct: 190 KDSTGICFIGERPFRAFLNRYLSYEPGPIKTPE-GDEIGQHVGLSFYTIGQRKGIGIGGL 248
Query: 260 ---RLPGG---PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPP 403
R P G WYV KD NN ++V + + G W +G+ P
Sbjct: 249 KSFRRPDGTSDAWYVARKDTHNNTLYVVQGHDHPWLLSPSLEAGQSSWIAGISP 302
Score = 39.3 bits (90), Expect(2) = 1e-15
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG I K EVR++A K LPN +KD F
Sbjct: 159 QLSKTIFPLGEIRKTEVRQIAEKIGLPNAKKKDSTGICF 197
[206][TOP]
>UniRef100_Q32EZ1 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Shigella dysenteriae
Sd197 RepID=MNMA_SHIDS
Length = 368
Score = 78.6 bits (192), Expect(2) = 1e-15
Identities = 36/86 (41%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F EF+ R++ + G I+ + GD +G+H+G ++T+GQR+GL + G
Sbjct: 193 KDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKGLGIGGT 251
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV+NN++ V++ +
Sbjct: 252 KEGTEEPWYVVDKDVENNILIVAQGH 277
Score = 28.1 bits (61), Expect(2) = 1e-15
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K +VR++A L +KD F
Sbjct: 162 QIAKSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICF 200
[207][TOP]
>UniRef100_UPI000196D4C0 hypothetical protein NEIMUCOT_01630 n=1 Tax=Neisseria mucosa ATCC
25996 RepID=UPI000196D4C0
Length = 367
Score = 64.3 bits (155), Expect(2) = 1e-15
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F EF+ +++ G ++ E G +G+H G FYT+GQR+GL + G
Sbjct: 194 KDSTGICFIGERPFREFLQKYLPTNNGKMVTPE-GKTVGEHVGLMFYTLGQRKGLGIGGA 252
Query: 275 --PWYVVEKDVKNNVVFVSRNY 334
PW+V KD+ N + V + +
Sbjct: 253 GEPWFVAAKDLTKNELIVVQGH 274
Score = 42.4 bits (98), Expect(2) = 1e-15
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL+R +FPLG + K EVRRLA +F+LP +KD F
Sbjct: 163 QLERAIFPLGDLEKPEVRRLAAEFNLPTAAKKDSTGICF 201
[208][TOP]
>UniRef100_C6M3X9 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Neisseria sicca ATCC 29256 RepID=C6M3X9_NEISI
Length = 367
Score = 64.3 bits (155), Expect(2) = 1e-15
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F EF+ +++ G ++ E G +G+H G FYT+GQR+GL + G
Sbjct: 194 KDSTGICFIGERPFREFLQKYLPTNNGKMVTPE-GKTVGEHVGLMFYTLGQRKGLGIGGA 252
Query: 275 --PWYVVEKDVKNNVVFVSRNY 334
PW+V KD+ N + V + +
Sbjct: 253 GEPWFVAAKDLTKNELIVVQGH 274
Score = 42.4 bits (98), Expect(2) = 1e-15
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL+R +FPLG + K EVRRLA +F+LP +KD F
Sbjct: 163 QLERAIFPLGDLEKPEVRRLAAEFNLPTAAKKDSTGICF 201
[209][TOP]
>UniRef100_Q46XF1 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Ralstonia eutropha
JMP134 RepID=MNMA_RALEJ
Length = 362
Score = 65.5 bits (158), Expect(2) = 1e-15
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--- 265
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT+GQR+G+ L
Sbjct: 191 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTPDGKVVGEHIGLAFYTLGQRKGIGLGGS 249
Query: 266 ---PGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPP 403
G WYV KD+ +N ++V + + L W +G PP
Sbjct: 250 REGSGDAWYVARKDMASNTLYVVQGHDHPWLLTPTLVAADLSWVAGEPP 298
Score = 41.2 bits (95), Expect(2) = 1e-15
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL R LFPLG IPK VR +A + LPN +KD F
Sbjct: 160 QLSRTLFPLGEIPKTRVREIAAEIGLPNAKKKDSTGICF 198
[210][TOP]
>UniRef100_Q9Z8A5 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Chlamydophila pneumoniae
RepID=MNMA_CHLPN
Length = 361
Score = 74.3 bits (181), Expect(2) = 1e-15
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+GK F EF+ + + + G +++ +T + +G+H+G +YTIGQR+GL L G
Sbjct: 190 KDSTGICFIGKRPFKEFLEKFLPNKTGNVIDWDTKEIVGQHQGAHYYTIGQRRGLDLGGS 249
Query: 275 --PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPP 403
P YVV K+++ N +++ R R L WF+ PP
Sbjct: 250 EKPCYVVGKNIEENSIYIVRGEDHPQLYLRELTARELNWFT--PP 292
Score = 32.3 bits (72), Expect(2) = 1e-15
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 6 LKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
L +LFPLG + K EVR +A + LP ++KD F
Sbjct: 160 LHNVLFPLGEMNKTEVRAIAAQAALPTAEKKDSTGICF 197
[211][TOP]
>UniRef100_B5JLN8 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLN8_9BACT
Length = 360
Score = 73.9 bits (180), Expect(2) = 1e-15
Identities = 34/81 (41%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K SQGICF+G I+ S+F+ ++ +R G I+ A+ LG+HRG ++TIGQR+G+ +P
Sbjct: 190 KDSQGICFIGNIKMSDFLREYVPDRPGPIIRADDDQTLGQHRGLHYFTIGQRRGIGIPSN 249
Query: 275 P----WYVVEKDVKNNVVFVS 325
+ VV KD++ N + VS
Sbjct: 250 TDNEFYVVVGKDIQRNALLVS 270
Score = 32.7 bits (73), Expect(2) = 1e-15
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ R FP+G + K E+R LA LPN +KD + F
Sbjct: 159 QVARARFPVGHLLKPELRELAQTASLPNAKKKDSQGICF 197
[212][TOP]
>UniRef100_A4JBM2 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Burkholderia
vietnamiensis G4 RepID=MNMA_BURVG
Length = 384
Score = 67.8 bits (164), Expect(2) = 1e-15
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G ++ G +G+H G FYT GQR+G+ L G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTKPGP-MKTPDGKRVGEHIGLAFYTFGQRKGIGLGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
PW+V KD+ +N ++V + + G++ W +G PP+
Sbjct: 249 KDGSGEPWFVAAKDIPSNTLYVVQGHDHPWLLSHELVAGNVSWVAGEPPA 298
Score = 38.5 bits (88), Expect(2) = 1e-15
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + +FPLG +PK +VR +A + LPN +KD F
Sbjct: 159 QLSKTMFPLGEMPKTKVREIAAQIGLPNAKKKDSTGICF 197
[213][TOP]
>UniRef100_C3TDE7 Putative uncharacterized protein n=1 Tax=Escherichia coli
RepID=C3TDE7_ECOLX
Length = 383
Score = 78.6 bits (192), Expect(2) = 1e-15
Identities = 36/86 (41%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F EF+ R++ + G I+ + GD +G+H+G ++T+GQR+GL + G
Sbjct: 208 KDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKGLGIGGT 266
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV+NN++ V++ +
Sbjct: 267 KEGTEEPWYVVDKDVENNILIVAQGH 292
Score = 27.7 bits (60), Expect(2) = 1e-15
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K +VR++A L +KD F
Sbjct: 177 QIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICF 215
[214][TOP]
>UniRef100_C1HFC9 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Escherichia sp. 3_2_53FAA RepID=C1HFC9_9ESCH
Length = 383
Score = 78.6 bits (192), Expect(2) = 1e-15
Identities = 36/86 (41%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F EF+ R++ + G I+ + GD +G+H+G ++T+GQR+GL + G
Sbjct: 208 KDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKGLGIGGT 266
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV+NN++ V++ +
Sbjct: 267 KDGTEEPWYVVDKDVENNILIVAQGH 292
Score = 27.7 bits (60), Expect(2) = 1e-15
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K +VR++A L +KD F
Sbjct: 177 QIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICF 215
[215][TOP]
>UniRef100_UPI0001AF481F tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Neisseria gonorrhoeae DGI18 RepID=UPI0001AF481F
Length = 383
Score = 63.9 bits (154), Expect(2) = 1e-15
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F EF+ +++ G ++ E G +G+H G FYT+GQR+GL + G
Sbjct: 210 KDSTGICFIGERPFREFLQKYLPTDNGKMVTPE-GKTIGEHVGLMFYTLGQRKGLGIGGA 268
Query: 275 --PWYVVEKDVKNNVVFVSRNY 334
PW+V KD+ N + V + +
Sbjct: 269 GEPWFVAAKDLTKNELIVVQGH 290
Score = 42.4 bits (98), Expect(2) = 1e-15
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL+R +FPLG + K EVRRLA +F+LP +KD F
Sbjct: 179 QLERAIFPLGGLEKPEVRRLAAEFNLPTAAKKDSTGICF 217
[216][TOP]
>UniRef100_UPI0001AF435B tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Neisseria gonorrhoeae PID1 RepID=UPI0001AF435B
Length = 383
Score = 63.9 bits (154), Expect(2) = 1e-15
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F EF+ +++ G ++ E G +G+H G FYT+GQR+GL + G
Sbjct: 210 KDSTGICFIGERPFREFLQKYLPTDNGKMVTPE-GKTIGEHVGLMFYTLGQRKGLGIGGA 268
Query: 275 --PWYVVEKDVKNNVVFVSRNY 334
PW+V KD+ N + V + +
Sbjct: 269 GEPWFVAAKDLTKNELIVVQGH 290
Score = 42.4 bits (98), Expect(2) = 1e-15
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL+R +FPLG + K EVRRLA +F+LP +KD F
Sbjct: 179 QLERAIFPLGGLEKPEVRRLAAEFNLPTAAKKDSTGICF 217
[217][TOP]
>UniRef100_UPI0001AF3BB6 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Neisseria gonorrhoeae SK-93-1035 RepID=UPI0001AF3BB6
Length = 383
Score = 63.9 bits (154), Expect(2) = 1e-15
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F EF+ +++ G ++ E G +G+H G FYT+GQR+GL + G
Sbjct: 210 KDSTGICFIGERPFREFLQKYLPTDNGKMVTPE-GKTIGEHVGLMFYTLGQRKGLGIGGA 268
Query: 275 --PWYVVEKDVKNNVVFVSRNY 334
PW+V KD+ N + V + +
Sbjct: 269 GEPWFVAAKDLTKNELIVVQGH 290
Score = 42.4 bits (98), Expect(2) = 1e-15
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL+R +FPLG + K EVRRLA +F+LP +KD F
Sbjct: 179 QLERAIFPLGGLEKPEVRRLAAEFNLPTAAKKDSTGICF 217
[218][TOP]
>UniRef100_C1HZP1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=2
Tax=Neisseria gonorrhoeae RepID=C1HZP1_NEIGO
Length = 383
Score = 63.9 bits (154), Expect(2) = 1e-15
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F EF+ +++ G ++ E G +G+H G FYT+GQR+GL + G
Sbjct: 210 KDSTGICFIGERPFREFLQKYLPTDNGKMVTPE-GKTIGEHVGLMFYTLGQRKGLGIGGA 268
Query: 275 --PWYVVEKDVKNNVVFVSRNY 334
PW+V KD+ N + V + +
Sbjct: 269 GEPWFVAAKDLTKNELIVVQGH 290
Score = 42.4 bits (98), Expect(2) = 1e-15
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL+R +FPLG + K EVRRLA +F+LP +KD F
Sbjct: 179 QLERAIFPLGGLEKPEVRRLAAEFNLPTAAKKDSTGICF 217
[219][TOP]
>UniRef100_A4KPC1 TRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Francisella tularensis subsp. holarctica 257
RepID=A4KPC1_FRATU
Length = 381
Score = 73.9 bits (180), Expect(2) = 1e-15
Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--- 265
K S GICF+G+ +F EF+++++ ++G I + E G +G H G +YTIGQRQGL +
Sbjct: 213 KDSTGICFIGERKFKEFLSKYLPAQKGEIHD-ENGIKIGMHDGLMYYTIGQRQGLGIGGV 271
Query: 266 ---PGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
P PW+ +KD++NNV+ + + ++ + L W +G+ P+
Sbjct: 272 KDRPEVPWFAAKKDLENNVLIAVQGHDHPLLFKQSLQAIELSWVAGMAPA 321
Score = 32.3 bits (72), Expect(2) = 1e-15
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL++ +FP+G I K +VR +A + +L D+KD F
Sbjct: 182 QLRQTIFPIGNIEKSKVREIAKENNLVTFDKKDSTGICF 220
[220][TOP]
>UniRef100_A3JG05 TRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Marinobacter sp. ELB17 RepID=A3JG05_9ALTE
Length = 374
Score = 74.3 bits (181), Expect(2) = 1e-15
Identities = 35/84 (41%), Positives = 55/84 (65%), Gaps = 6/84 (7%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F++F+ +++ + G I E GD +G+H+G ++TIGQRQGL + G
Sbjct: 184 KDSTGICFIGERKFTDFLKQYLPAQPGTI-ETPEGDIIGRHQGLMYHTIGQRQGLGIGGL 242
Query: 272 -----GPWYVVEKDVKNNVVFVSR 328
PWYV EKD+ NV+ ++
Sbjct: 243 NGYSDEPWYVAEKDLARNVLIAAQ 266
Score = 32.0 bits (71), Expect(2) = 1e-15
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
++ R LFP+G + K EVRR+A L D+KD F
Sbjct: 153 RIARTLFPVGELEKPEVRRIAEAQGLVTHDKKDSTGICF 191
[221][TOP]
>UniRef100_C0XKM1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Lactobacillus hilgardii ATCC 8290 RepID=C0XKM1_LACHI
Length = 374
Score = 70.9 bits (172), Expect(2) = 1e-15
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ ++ G ++ + G+ G+H G +YTIGQR+GL + G
Sbjct: 194 KDSVGICFIGEKNFKQFLGHYLPATPGKMMTVD-GEVKGQHDGLMYYTIGQRRGLGIGGD 252
Query: 275 -----PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGL 397
PW+V+ KD+K N+++V + Y + + W + L
Sbjct: 253 GVDNQPWFVIGKDLKKNILYVGKGYHNELLYADYLEASDIHWVNNL 298
Score = 35.4 bits (80), Expect(2) = 1e-15
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKD 101
QL R++FP+G + K EVR +A K L D+KD
Sbjct: 163 QLDRVMFPIGNLVKPEVREIARKAGLATADKKD 195
[222][TOP]
>UniRef100_C0WQB4 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Lactobacillus buchneri ATCC 11577 RepID=C0WQB4_LACBU
Length = 374
Score = 70.9 bits (172), Expect(2) = 1e-15
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ ++ G ++ + G+ G+H G +YTIGQR+GL + G
Sbjct: 194 KDSVGICFIGEKNFKQFLGHYLPATPGKMMTVD-GEVKGQHDGLMYYTIGQRRGLGIGGD 252
Query: 275 -----PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGL 397
PW+V+ KD+K N+++V + Y + + W + L
Sbjct: 253 GVDNQPWFVIGKDLKKNILYVGKGYHNELLYADYLEASDIHWVNNL 298
Score = 35.4 bits (80), Expect(2) = 1e-15
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKD 101
QL R++FP+G + K EVR +A K L D+KD
Sbjct: 163 QLDRVMFPIGNLVKPEVREIARKAGLATADKKD 195
[223][TOP]
>UniRef100_Q12N64 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Shewanella denitrificans
OS217 RepID=MNMA_SHEDO
Length = 372
Score = 74.7 bits (182), Expect(2) = 1e-15
Identities = 36/84 (42%), Positives = 57/84 (67%), Gaps = 6/84 (7%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F++F+A ++ + G I E G+ +GKH+G ++T+GQR+GL + G
Sbjct: 199 KDSTGICFIGERKFTDFLATYLPAQPGDI-ETPEGEVIGKHQGLMYHTLGQRKGLGIGGL 257
Query: 272 -----GPWYVVEKDVKNNVVFVSR 328
PWYVVEKD+ NV+ V++
Sbjct: 258 KDSNEDPWYVVEKDLLRNVLIVAQ 281
Score = 31.6 bits (70), Expect(2) = 1e-15
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ R LFP+G + K EVR +A + L D+KD F
Sbjct: 168 QVARSLFPVGELEKHEVRDIAKQMGLITHDKKDSTGICF 206
[224][TOP]
>UniRef100_B9E700 tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E700_MACCJ
Length = 371
Score = 68.6 bits (166), Expect(2) = 1e-15
Identities = 33/82 (40%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--P 268
K S GICF+G+ F EF++ ++ + G ++ G +G H G +YTIGQR GL +
Sbjct: 192 KDSTGICFIGERNFKEFLSGYLPAQNGE-MQTLDGKPMGTHSGLMYYTIGQRHGLGIGGD 250
Query: 269 GGPWYVVEKDVKNNVVFVSRNY 334
G PW+VV K++K+NV++V + +
Sbjct: 251 GDPWFVVGKNLKDNVLYVEQGF 272
Score = 37.7 bits (86), Expect(2) = 1e-15
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL R++FPLG + K EVR +A K DL +KD F
Sbjct: 161 QLSRVMFPLGHLQKPEVREIALKHDLATAKKKDSTGICF 199
[225][TOP]
>UniRef100_Q8XVV4 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Ralstonia solanacearum
RepID=MNMA_RALSO
Length = 370
Score = 66.6 bits (161), Expect(2) = 1e-15
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F +F+ R++ + G I + G +G+H G FYT+GQR+G+ + G
Sbjct: 190 KDSTGICFIGERPFRDFLNRYLPTKPGPIRTPD-GKTIGQHIGLAFYTLGQRKGIGIGGS 248
Query: 275 ------PWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
WYV KD+ N ++V++ + L W +G PP+
Sbjct: 249 RDGNGDAWYVARKDMAANTLYVAQGHDHPWLLAHTVHADDLSWVAGHPPA 298
Score = 39.7 bits (91), Expect(2) = 1e-15
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL R LFPLG +PK VR +A + LPN +KD F
Sbjct: 159 QLSRTLFPLGEMPKTRVREIAAEIGLPNARKKDSTGICF 197
[226][TOP]
>UniRef100_B7UQ42 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Escherichia coli O127:H6 str. E2348/69
RepID=B7UQ42_ECO27
Length = 368
Score = 78.6 bits (192), Expect(2) = 1e-15
Identities = 36/86 (41%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F EF+ R++ + G I+ + GD +G+H+G ++T+GQR+GL + G
Sbjct: 193 KDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKGLGIGGT 251
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV+NN++ V++ +
Sbjct: 252 KEGTEEPWYVVDKDVENNILIVAQGH 277
Score = 27.7 bits (60), Expect(2) = 1e-15
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K +VR++A L +KD F
Sbjct: 162 QIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICF 200
[227][TOP]
>UniRef100_B7N3P3 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=2
Tax=Escherichia coli RepID=B7N3P3_ECOLU
Length = 368
Score = 78.6 bits (192), Expect(2) = 1e-15
Identities = 36/86 (41%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F EF+ R++ + G I+ + GD +G+H+G ++T+GQR+GL + G
Sbjct: 193 KDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKGLGIGGT 251
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV+NN++ V++ +
Sbjct: 252 KDGTEEPWYVVDKDVENNILIVAQGH 277
Score = 27.7 bits (60), Expect(2) = 1e-15
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K +VR++A L +KD F
Sbjct: 162 QIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICF 200
[228][TOP]
>UniRef100_B1ELG3 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Escherichia albertii TW07627 RepID=B1ELG3_9ESCH
Length = 368
Score = 78.6 bits (192), Expect(2) = 1e-15
Identities = 36/86 (41%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F EF+ R++ + G I+ + GD +G+H+G ++T+GQR+GL + G
Sbjct: 193 KDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKGLGIGGT 251
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV+NN++ V++ +
Sbjct: 252 KDGTEEPWYVVDKDVENNILIVAQGH 277
Score = 27.7 bits (60), Expect(2) = 1e-15
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K +VR++A L +KD F
Sbjct: 162 QIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICF 200
[229][TOP]
>UniRef100_B1LI10 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Escherichia
RepID=MNMA_ECOSM
Length = 368
Score = 78.6 bits (192), Expect(2) = 1e-15
Identities = 36/86 (41%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F EF+ R++ + G I+ + GD +G+H+G ++T+GQR+GL + G
Sbjct: 193 KDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKGLGIGGT 251
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV+NN++ V++ +
Sbjct: 252 KEGTEEPWYVVDKDVENNILIVAQGH 277
Score = 27.7 bits (60), Expect(2) = 1e-15
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K +VR++A L +KD F
Sbjct: 162 QIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICF 200
[230][TOP]
>UniRef100_A1AA27 tRNA-specific 2-thiouridylase mnmA n=6 Tax=Escherichia coli
RepID=MNMA_ECOK1
Length = 368
Score = 78.6 bits (192), Expect(2) = 1e-15
Identities = 36/86 (41%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F EF+ R++ + G I+ + GD +G+H+G ++T+GQR+GL + G
Sbjct: 193 KDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKGLGIGGT 251
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV+NN++ V++ +
Sbjct: 252 KDGTEEPWYVVDKDVENNILIVAQGH 277
Score = 27.7 bits (60), Expect(2) = 1e-15
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K +VR++A L +KD F
Sbjct: 162 QIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICF 200
[231][TOP]
>UniRef100_Q8X735 tRNA-specific 2-thiouridylase mnmA n=12 Tax=Escherichia coli
O157:H7 RepID=MNMA_ECO57
Length = 368
Score = 78.6 bits (192), Expect(2) = 1e-15
Identities = 36/86 (41%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F EF+ R++ + G I+ + GD +G+H+G ++T+GQR+GL + G
Sbjct: 193 KDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKGLGIGGT 251
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV+NN++ V++ +
Sbjct: 252 KEGTEEPWYVVDKDVENNILIVAQGH 277
Score = 27.7 bits (60), Expect(2) = 1e-15
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K +VR++A L +KD F
Sbjct: 162 QIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICF 200
[232][TOP]
>UniRef100_UPI0001AF58C8 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Neisseria gonorrhoeae MS11 RepID=UPI0001AF58C8
Length = 367
Score = 63.9 bits (154), Expect(2) = 1e-15
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F EF+ +++ G ++ E G +G+H G FYT+GQR+GL + G
Sbjct: 194 KDSTGICFIGERPFREFLQKYLPTDNGKMVTPE-GKTIGEHVGLMFYTLGQRKGLGIGGA 252
Query: 275 --PWYVVEKDVKNNVVFVSRNY 334
PW+V KD+ N + V + +
Sbjct: 253 GEPWFVAAKDLTKNELIVVQGH 274
Score = 42.4 bits (98), Expect(2) = 1e-15
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL+R +FPLG + K EVRRLA +F+LP +KD F
Sbjct: 163 QLERAIFPLGGLEKPEVRRLAAEFNLPTAAKKDSTGICF 201
[233][TOP]
>UniRef100_Q5F7G4 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Neisseria gonorrhoeae FA
1090 RepID=MNMA_NEIG1
Length = 367
Score = 63.9 bits (154), Expect(2) = 1e-15
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGG 274
K S GICF+G+ F EF+ +++ G ++ E G +G+H G FYT+GQR+GL + G
Sbjct: 194 KDSTGICFIGERPFREFLQKYLPTDNGKMVTPE-GKTIGEHVGLMFYTLGQRKGLGIGGA 252
Query: 275 --PWYVVEKDVKNNVVFVSRNY 334
PW+V KD+ N + V + +
Sbjct: 253 GEPWFVAAKDLTKNELIVVQGH 274
Score = 42.4 bits (98), Expect(2) = 1e-15
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL+R +FPLG + K EVRRLA +F+LP +KD F
Sbjct: 163 QLERAIFPLGGLEKPEVRRLAAEFNLPTAAKKDSTGICF 201
[234][TOP]
>UniRef100_A9NDN1 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Coxiella burnetii RSA
331 RepID=MNMA_COXBR
Length = 362
Score = 78.2 bits (191), Expect(2) = 1e-15
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F +F+ + + G I E G +GKH G FYT+GQR+GL + G
Sbjct: 194 KDSTGICFIGERKFKDFLNEFLLAKPGNI-ETSEGKIIGKHDGIMFYTVGQRKGLHIGGR 252
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDVK NV+ V + Y
Sbjct: 253 PDAGEAPWYVVDKDVKRNVLIVVQGY 278
Score = 28.1 bits (61), Expect(2) = 1e-15
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL +FP+G K EVR +A K N +KD F
Sbjct: 163 QLANSVFPIGGYQKSEVRAIAKKRGFINHAKKDSTGICF 201
[235][TOP]
>UniRef100_B5JWU8 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=gamma proteobacterium HTCC5015 RepID=B5JWU8_9GAMM
Length = 359
Score = 75.9 bits (185), Expect(2) = 1e-15
Identities = 41/111 (36%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--- 265
K S GICF+G+ RF +F+++++ + G + + E G LG H G +YTIGQRQG+ +
Sbjct: 183 KDSTGICFIGERRFRDFLSQYLPAQPGKVEDLE-GTVLGDHNGLMYYTIGQRQGIGIGGL 241
Query: 266 ---PGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPSP 409
G PWYVVEKD++ NV+ V++ + L W + P +P
Sbjct: 242 RNSDGEPWYVVEKDLERNVLKVAQGSEHPALFKTHLDASQLYWVNQAPDAP 292
Score = 30.4 bits (67), Expect(2) = 1e-15
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
+L R LFP+G + K VR +A N ++KD F
Sbjct: 152 ELSRALFPIGEMDKSHVREMAMNAGFDNHEKKDSTGICF 190
[236][TOP]
>UniRef100_UPI00018554A3 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Francisella novicida FTG RepID=UPI00018554A3
Length = 359
Score = 73.9 bits (180), Expect(2) = 1e-15
Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--- 265
K S GICF+G+ +F EF+++++ ++G I + E G +G H G +YTIGQRQGL +
Sbjct: 191 KDSTGICFIGERKFKEFLSKYLPAQKGEIHD-ENGIKIGMHDGLMYYTIGQRQGLGIGGV 249
Query: 266 ---PGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
P PW+ +KD++NNV+ + + ++ + L W +G+ P+
Sbjct: 250 KDRPEVPWFAAKKDLENNVLIAVQGHDHPLLFKQSLQAIELSWVAGMAPA 299
Score = 32.3 bits (72), Expect(2) = 1e-15
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL++ +FP+G I K +VR +A + +L D+KD F
Sbjct: 160 QLRQTIFPIGNIEKSKVREIAKENNLVTFDKKDSTGICF 198
[237][TOP]
>UniRef100_A7N9A5 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Francisella tularensis
subsp. holarctica RepID=MNMA_FRATF
Length = 359
Score = 73.9 bits (180), Expect(2) = 1e-15
Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--- 265
K S GICF+G+ +F EF+++++ ++G I + E G +G H G +YTIGQRQGL +
Sbjct: 191 KDSTGICFIGERKFKEFLSKYLPAQKGEIHD-ENGIKIGMHDGLMYYTIGQRQGLGIGGV 249
Query: 266 ---PGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
P PW+ +KD++NNV+ + + ++ + L W +G+ P+
Sbjct: 250 KDRPEVPWFAAKKDLENNVLIAVQGHDHPLLFKQSLQAIELSWVAGMAPA 299
Score = 32.3 bits (72), Expect(2) = 1e-15
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL++ +FP+G I K +VR +A + +L D+KD F
Sbjct: 160 QLRQTIFPIGNIEKSKVREIAKENNLVTFDKKDSTGICF 198
[238][TOP]
>UniRef100_Q14FW2 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Francisella tularensis
RepID=MNMA_FRAT1
Length = 359
Score = 73.9 bits (180), Expect(2) = 1e-15
Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--- 265
K S GICF+G+ +F EF+++++ ++G I + E G +G H G +YTIGQRQGL +
Sbjct: 191 KDSTGICFIGERKFKEFLSKYLPAQKGEIHD-ENGIKIGMHDGLMYYTIGQRQGLGIGGV 249
Query: 266 ---PGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
P PW+ +KD++NNV+ + + ++ + L W +G+ P+
Sbjct: 250 KDRPEVPWFAAKKDLENNVLIAVQGHDHPLLFKQSLQAIELSWVAGMAPA 299
Score = 32.3 bits (72), Expect(2) = 1e-15
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL++ +FP+G I K +VR +A + +L D+KD F
Sbjct: 160 QLRQTIFPIGNIEKSKVREIAKENNLVTFDKKDSTGICF 198
[239][TOP]
>UniRef100_A7YRA7 Putative uncharacterized protein n=1 Tax=Francisella tularensis
subsp. holarctica FSC022 RepID=A7YRA7_FRATU
Length = 359
Score = 73.9 bits (180), Expect(2) = 1e-15
Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--- 265
K S GICF+G+ +F EF+++++ ++G I + E G +G H G +YTIGQRQGL +
Sbjct: 191 KDSTGICFIGERKFKEFLSKYLPAQKGEIHD-ENGIKIGMHDGLMYYTIGQRQGLGIGGV 249
Query: 266 ---PGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
P PW+ +KD++NNV+ + + ++ + L W +G+ P+
Sbjct: 250 KDRPEVPWFAAKKDLENNVLIAVQGHDHPLLFKQSLQAIKLSWVAGMAPA 299
Score = 32.3 bits (72), Expect(2) = 1e-15
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL++ +FP+G I K +VR +A + +L D+KD F
Sbjct: 160 QLRQTIFPIGNIEKSKVREIAKENNLVTFDKKDSTGICF 198
[240][TOP]
>UniRef100_A7JPG8 Putative uncharacterized protein n=1 Tax=Francisella novicida
GA99-3548 RepID=A7JPG8_FRANO
Length = 359
Score = 73.9 bits (180), Expect(2) = 1e-15
Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--- 265
K S GICF+G+ +F EF+++++ ++G I + E G +G H G +YTIGQRQGL +
Sbjct: 191 KDSTGICFIGERKFKEFLSKYLPAQKGEIHD-ENGIKIGMHDGLMYYTIGQRQGLGIGGV 249
Query: 266 ---PGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
P PW+ +KD++NNV+ + + ++ + L W +G+ P+
Sbjct: 250 KDRPEVPWFAAKKDLENNVLIAVQGHDHPLLFKQSLQAIELSWVAGMAPA 299
Score = 32.3 bits (72), Expect(2) = 1e-15
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL++ +FP+G I K +VR +A + +L D+KD F
Sbjct: 160 QLRQTIFPIGNIEKSKVREIAKENNLVTFDKKDSTGICF 198
[241][TOP]
>UniRef100_A4J081 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Francisella tularensis
subsp. tularensis WY96-3418 RepID=MNMA_FRATW
Length = 359
Score = 73.9 bits (180), Expect(2) = 1e-15
Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--- 265
K S GICF+G+ +F EF+++++ ++G I + E G +G H G +YTIGQRQGL +
Sbjct: 191 KDSTGICFIGERKFKEFLSKYLPAQKGEIHD-ENGIKIGMHDGLMYYTIGQRQGLGIGGV 249
Query: 266 ---PGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
P PW+ +KD++NNV+ + + ++ + L W +G+ P+
Sbjct: 250 KDRPEVPWFAAKKDLENNVLIAVQGHDHPLLFKQSLQAIELSWVAGMAPA 299
Score = 32.3 bits (72), Expect(2) = 1e-15
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL++ +FP+G I K +VR +A + +L D+KD F
Sbjct: 160 QLRQTIFPIGNIEKSKVREIAKENNLVTFDKKDSTGICF 198
[242][TOP]
>UniRef100_A6GPU0 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Limnobacter sp. MED105 RepID=A6GPU0_9BURK
Length = 358
Score = 70.1 bits (170), Expect(2) = 1e-15
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--- 265
K S GICF+G+ F EF+ R++ G IL E G +G+H G FYT+GQR+G+ +
Sbjct: 189 KDSTGICFIGERPFREFLNRYLPTAPGPILNDE-GQQIGEHVGLSFYTLGQRKGIGIGGQ 247
Query: 266 ---PGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRIFRVGSLKWFSGLPPS 406
G PW+V KD++NN ++V + + +++ + SG PS
Sbjct: 248 KEGNGEPWFVARKDLQNNTLYVVQGHDHPWLHQKVLVAEQAHYISGHAPS 297
Score = 36.2 bits (82), Expect(2) = 1e-15
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL + LFPLG I K EVR++A + L N +KD F
Sbjct: 158 QLSKTLFPLGEIQKTEVRKIALELGLANATKKDSTGICF 196
[243][TOP]
>UniRef100_A9NFP7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Acholeplasma laidlawii
PG-8A RepID=MNMA_ACHLI
Length = 375
Score = 62.8 bits (151), Expect(2) = 2e-15
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ F+EF+ ++ +EG + + G F+ +H G YTIGQR+GL + G
Sbjct: 199 KDSTGICFIGERHFNEFLLNYLPAKEGDMRRLD-GTFIKRHFGLMNYTIGQRKGLGIGGT 257
Query: 272 ----GPWYVVEKDVKNNVVFVSRNY 334
W+VV KD+ N ++V +
Sbjct: 258 TDTTDAWFVVGKDLSTNTLYVEPGF 282
Score = 43.1 bits (100), Expect(2) = 2e-15
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL+ +LFP+G +PK EVRR+A + DL D+KD F
Sbjct: 168 QLRNVLFPIGNLPKSEVRRIAKEHDLATADKKDSTGICF 206
[244][TOP]
>UniRef100_C5QT07 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Staphylococcus epidermidis M23864:W1
RepID=C5QT07_STAEP
Length = 372
Score = 69.3 bits (168), Expect(2) = 2e-15
Identities = 32/82 (39%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRL--P 268
K S GICF+G+ F EF+++++ + G ++ + G +G+H G +YTIGQR GL +
Sbjct: 193 KDSTGICFIGERNFKEFLSQYLPAQSGDMVTLD-GKKMGQHSGLMYYTIGQRHGLGIGGD 251
Query: 269 GGPWYVVEKDVKNNVVFVSRNY 334
G PW+VV K++ +NV++V + +
Sbjct: 252 GDPWFVVGKNLDDNVLYVEQGF 273
Score = 36.6 bits (83), Expect(2) = 2e-15
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL +++FP+G I K EVRR+A + DL +KD F
Sbjct: 162 QLSKVMFPIGDIEKSEVRRIAEEQDLATAKKKDSTGICF 200
[245][TOP]
>UniRef100_B6IZW5 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Coxiella burnetii
RepID=MNMA_COXB2
Length = 371
Score = 77.8 bits (190), Expect(2) = 2e-15
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F +F+ + + G I E G +GKH G FYT+GQR+GL + G
Sbjct: 203 KDSTGICFIGERKFKDFLNEFLLAQPGNI-ETSEGKIIGKHDGIMFYTVGQRKGLHIGGR 261
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDVK NV+ V + Y
Sbjct: 262 PDAGEAPWYVVDKDVKRNVLIVVQGY 287
Score = 28.1 bits (61), Expect(2) = 2e-15
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
QL +FP+G K EVR +A K N +KD F
Sbjct: 172 QLANSVFPIGGYQKSEVRAIAKKRGFINHAKKDSTGICF 210
[246][TOP]
>UniRef100_A8AHK2 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Citrobacter koseri ATCC
BAA-895 RepID=MNMA_CITK8
Length = 368
Score = 78.6 bits (192), Expect(2) = 2e-15
Identities = 36/86 (41%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F EF+ R++ + G I+ + GD +G+H+G ++T+GQR+GL + G
Sbjct: 193 KDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGQHQGLMYHTLGQRKGLGIGGT 251
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV+NN++ V++ +
Sbjct: 252 KEGTEDPWYVVDKDVENNILVVAQGH 277
Score = 27.3 bits (59), Expect(2) = 2e-15
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K +VR++A L +KD F
Sbjct: 162 QIAQSLFPVGELEKPQVRKIAEDLGLITAKKKDSTGICF 200
[247][TOP]
>UniRef100_B3WRN8 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Escherichia coli B171 RepID=B3WRN8_ECOLX
Length = 368
Score = 78.2 bits (191), Expect(2) = 2e-15
Identities = 36/86 (41%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F EF+ R++ + G I+ + GD +G+H+G ++T+GQR+GL + G
Sbjct: 193 KDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKGLGIGGT 251
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV+NN++ V++ +
Sbjct: 252 KEGTEEPWYVVDKDVENNILVVAQGH 277
Score = 27.7 bits (60), Expect(2) = 2e-15
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K +VR++A L +KD F
Sbjct: 162 QIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICF 200
[248][TOP]
>UniRef100_B2NB47 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1
Tax=Escherichia coli 53638 RepID=B2NB47_ECOLX
Length = 368
Score = 78.2 bits (191), Expect(2) = 2e-15
Identities = 36/86 (41%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F EF+ R++ + G I+ + GD +G+H+G ++T+GQR+GL + G
Sbjct: 193 KDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKGLGIGGT 251
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV+NN++ V++ +
Sbjct: 252 KEGTEEPWYVVDKDVENNILVVAQGH 277
Score = 27.7 bits (60), Expect(2) = 2e-15
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K +VR++A L +KD F
Sbjct: 162 QIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICF 200
[249][TOP]
>UniRef100_Q0T5N9 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Shigella flexneri
RepID=MNMA_SHIF8
Length = 368
Score = 78.2 bits (191), Expect(2) = 2e-15
Identities = 36/86 (41%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F EF+ R++ + G I+ + GD +G+H+G ++T+GQR+GL + G
Sbjct: 193 KDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKGLGIGGT 251
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV+NN++ V++ +
Sbjct: 252 KEGTEEPWYVVDKDVENNILVVAQGH 277
Score = 27.7 bits (60), Expect(2) = 2e-15
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K +VR++A L +KD F
Sbjct: 162 QIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICF 200
[250][TOP]
>UniRef100_Q31ZK9 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Shigella boydii Sb227
RepID=MNMA_SHIBS
Length = 368
Score = 78.2 bits (191), Expect(2) = 2e-15
Identities = 36/86 (41%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Frame = +2
Query: 95 KGSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPG- 271
K S GICF+G+ +F EF+ R++ + G I+ + GD +G+H+G ++T+GQR+GL + G
Sbjct: 193 KDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKGLGIGGT 251
Query: 272 -----GPWYVVEKDVKNNVVFVSRNY 334
PWYVV+KDV+NN++ V++ +
Sbjct: 252 KEGTEEPWYVVDKDVENNILVVAQGH 277
Score = 27.7 bits (60), Expect(2) = 2e-15
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 3 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDPREYAF 119
Q+ + LFP+G + K +VR++A L +KD F
Sbjct: 162 QIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICF 200