[UP]
[1][TOP]
>UniRef100_A2Q3D2 Putative non-LTR retroelement reverse transcriptase, related
(Fragment) n=1 Tax=Medicago truncatula
RepID=A2Q3D2_MEDTR
Length = 532
Score = 83.2 bits (204), Expect = 8e-15
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Frame = -2
Query: 364 ECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQFSITA-RNKNQRLGELAIWI 188
E + HLF C VW + W+GIS P+ +F QF++ A ++ IW
Sbjct: 410 ESATHLFLDCRIPTMVWLHVQNWIGISTVSPSQMREHFTQFTLMAGMPRSSHSVFKVIWF 469
Query: 187 ATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKAKFCGFTYSLYEWKSCPLECL 11
A VW +W RN+ +F N +HS L + ++ S+ WLKAK + ++W PL CL
Sbjct: 470 AYVWVIWKDRNNRVFNNTGSNHSVLFEKVKLNSFLWLKAKCPSLNFGYHDWWQHPLPCL 528
[2][TOP]
>UniRef100_Q2HUJ1 H+-transporting two-sector ATPase, alpha/beta subunit, central
region, related n=1 Tax=Medicago truncatula
RepID=Q2HUJ1_MEDTR
Length = 250
Score = 78.6 bits (192), Expect = 2e-13
Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Frame = -2
Query: 370 VEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQFS-ITARNKNQRLGELAI 194
+ E +GHLF C VW L WLG S P S ++ QF+ + +++ + I
Sbjct: 127 LSETTGHLFIGCESFGSVWVLLCHWLGFSFVPPGSIKDHYIQFTHLAGLSRSTHVFFKVI 186
Query: 193 WIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKAKFCGFTYSLYEWKSCPLEC 14
W+A VW++W +RN+ +F + +D ++++ ++ S+ WL + + Y+W PL C
Sbjct: 187 WLACVWAIWKERNNRVFNDTVIDLLHIVEKVKLNSFLWLSSNIEPIAFGFYDWWRHPLYC 246
Query: 13 L 11
+
Sbjct: 247 M 247
[3][TOP]
>UniRef100_Q2HSY1 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=Q2HSY1_MEDTR
Length = 150
Score = 77.8 bits (190), Expect = 3e-13
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Frame = -2
Query: 397 DLTCPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQF-SITARNK 221
D C E + HLF C +W + WLGI + P +F QF +++ +
Sbjct: 17 DAACVAGCGRSESTTHLFLNCDVFGSLWSYVSLWLGIPLVTPGDLHQHFIQFINMSGLPR 76
Query: 220 NQRLGELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKAKFCGFTYSLY 41
+ L IW +VW +W +RN +F N A S L++ ++ S+ WL++ F YS +
Sbjct: 77 STELFFKVIWFTSVWIIWKERNDRVFNNKASIPSVLIEKVKLTSFMWLQSNQASFIYSYH 136
Query: 40 EWKSCPLECL 11
+W + PL C+
Sbjct: 137 DWWNNPLLCM 146
[4][TOP]
>UniRef100_B9H021 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9H021_POPTR
Length = 677
Score = 76.3 bits (186), Expect = 1e-12
Identities = 36/114 (31%), Positives = 57/114 (50%)
Frame = -2
Query: 388 CPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQFSITARNKNQRL 209
CP C EE HL C + +W + +W G+S P + F+Q++ K Q+
Sbjct: 452 CPICLVEEESVDHLILLCYKHLTIWSKIIKWWGLSWCCPKNLSGLFSQWTFMVHGKFQKK 511
Query: 208 GELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKAKFCGFTYS 47
L ++ + WSLW+ RN +IF+ + ++ + LI +R WLKA F YS
Sbjct: 512 AWLMLFFSVAWSLWLLRNDLIFQQKSPNYDSVFFLIITRLCLWLKAFHPDFPYS 565
[5][TOP]
>UniRef100_A2Q533 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=A2Q533_MEDTR
Length = 313
Score = 75.9 bits (185), Expect = 1e-12
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Frame = -2
Query: 388 CPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQFSITAR-NKNQR 212
C V E +GHLF +C VW + WLG+S+ ++ QF A ++
Sbjct: 195 CVIGCEVVETAGHLFLSCENYCIVWSLISAWLGLSLVHQNDLQQHYHQFCYMAGFPRSTH 254
Query: 211 LGELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKAKFCGFTYSLYEW 35
IW A+VW +W RN IF+N A L++ I+ S+ W+KA+ F Y Y+W
Sbjct: 255 AYFTGIWYASVWVIWKDRNKRIFQNEASHSLVLMEKIKCNSFFWMKARNTSFNYCFYDW 313
[6][TOP]
>UniRef100_B9NB08 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NB08_POPTR
Length = 242
Score = 74.3 bits (181), Expect = 4e-12
Identities = 37/117 (31%), Positives = 57/117 (48%)
Frame = -2
Query: 397 DLTCPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQFSITARNKN 218
D CP C EE HL C +W + +W G+S P + F+Q++ K
Sbjct: 23 DSNCPNCLVEEESVHHLILHCHKHWIIWSKIIKWWGLSWCCPKNLSGLFSQWTFMVHGKF 82
Query: 217 QRLGELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKAKFCGFTYS 47
Q+ L ++ + WSLW+ RN +IF+ + ++ + LI +R WLKA F YS
Sbjct: 83 QKKAWLMLFFSVAWSLWLLRNDLIFQQKSPNYDSVFFLIITRLCLWLKALHLDFPYS 139
[7][TOP]
>UniRef100_Q2HUU9 Helix-turn-helix, Fis-type n=1 Tax=Medicago truncatula
RepID=Q2HUU9_MEDTR
Length = 171
Score = 73.9 bits (180), Expect = 5e-12
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
Frame = -2
Query: 364 ECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLAN-FAQF-SITARNKNQRLGELAIW 191
E + HLF +C + +W + W+G V + + L++ F QF T NK + IW
Sbjct: 50 ESAQHLFLSCSYFASLWSLVRDWIGF-VGVDTNVLSDHFVQFVHSTGGNKASQSFLQLIW 108
Query: 190 IATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKAKFCGFTYSLYEWKSCPLECL 11
+ W LW +RN++ F ++ LLD ++ S WLKA+ F + + W S PL+CL
Sbjct: 109 LLCAWVLWTERNNMCFNDSITPLPRLLDKVKYLSLGWLKARNASFLFGTFSWWSNPLQCL 168
[8][TOP]
>UniRef100_B9HA04 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HA04_POPTR
Length = 1285
Score = 73.6 bits (179), Expect = 7e-12
Identities = 39/120 (32%), Positives = 54/120 (45%)
Frame = -2
Query: 397 DLTCPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQFSITARNKN 218
D CPFC E HLF C S +W L RW G LP N ++S +
Sbjct: 1153 DALCPFCCKEIETIHHLFHLCPTSWSLWGRLFRWFGCVGCLPKDPNHNLQEWSGLLKGNF 1212
Query: 217 QRLGELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKAKFCGFTYSLYE 38
QR + WS+WI RN++IF + D + DL R WLK+ F+Y+ ++
Sbjct: 1213 QRQAITLLCKGLYWSIWIARNNMIFDSKTPDWDVIFDLTFHRLAFWLKSSVKNFSYTGFD 1272
[9][TOP]
>UniRef100_B9NAZ1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NAZ1_POPTR
Length = 325
Score = 72.8 bits (177), Expect = 1e-11
Identities = 42/127 (33%), Positives = 55/127 (43%), Gaps = 3/127 (2%)
Frame = -2
Query: 397 DLTCPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQFSITARNKN 218
D CPFC E HLF C S +W L RW G LP N ++S +
Sbjct: 193 DALCPFCCKEIETIHHLFHLCPTSWSLWGRLFRWFGRVGCLPKDPNHNLQEWSGLLKGNF 252
Query: 217 QRLGELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKAKFCGFTYS--- 47
QR + WS+WI RN++IF + D + DL R WLK+ F+Y+
Sbjct: 253 QRQAITLLCKGLYWSIWIARNNMIFDSKTPDWDVIFDLTFHRLAFWLKSSVKNFSYTGSD 312
Query: 46 LYEWKSC 26
LY C
Sbjct: 313 LYRNPEC 319
[10][TOP]
>UniRef100_B9HC32 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HC32_POPTR
Length = 670
Score = 72.4 bits (176), Expect = 1e-11
Identities = 36/114 (31%), Positives = 55/114 (48%)
Frame = -2
Query: 388 CPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQFSITARNKNQRL 209
CP C EE H+ C VW + W G++ P + A F+Q+ K Q+
Sbjct: 385 CPICLAEEESVDHILLHCHKHWIVWSKIINWWGLAWCCPKNLAALFSQWDSLVYGKFQKK 444
Query: 208 GELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKAKFCGFTYS 47
L + + WSLW+ RN +IF+ + ++ L LI +R W+KA F+YS
Sbjct: 445 AWLMLLFSVAWSLWLHRNDVIFKQSTPNYDTLFILIITRLCFWIKAIEPDFSYS 498
[11][TOP]
>UniRef100_B9GV42 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GV42_POPTR
Length = 406
Score = 71.2 bits (173), Expect = 3e-11
Identities = 35/114 (30%), Positives = 54/114 (47%)
Frame = -2
Query: 388 CPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQFSITARNKNQRL 209
CP C EE HLF C +W + W G++ P + F+Q+ K Q+
Sbjct: 121 CPICLVEEEMVDHLFIHCYKHWLIWSKIINWCGLAWCCPRNLANLFSQWDSLVYGKFQKK 180
Query: 208 GELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKAKFCGFTYS 47
+ ++ + WS+W+ RN +IF+ ++ L LI +R WLKA F YS
Sbjct: 181 AWVILFFSVAWSMWLLRNDVIFKQKIPNYDTLFFLIVTRLCLWLKAIEPDFPYS 234
[12][TOP]
>UniRef100_B9P4W2 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9P4W2_POPTR
Length = 174
Score = 70.5 bits (171), Expect = 6e-11
Identities = 35/114 (30%), Positives = 54/114 (47%)
Frame = -2
Query: 388 CPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQFSITARNKNQRL 209
CP C EE HLF C +W + W G++ P + F+Q+ K Q+
Sbjct: 26 CPICLVEEEMVDHLFIHCYKHWLIWSKIINWCGLAWCCPRNLPNLFSQWDSLVYGKFQKK 85
Query: 208 GELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKAKFCGFTYS 47
+ ++ + WS+W+ RN +IF+ ++ L LI +R WLKA F YS
Sbjct: 86 AWVMLFFSVAWSMWLLRNDVIFKQKIPNYDTLFFLIVTRLCLWLKAIEPDFPYS 139
[13][TOP]
>UniRef100_Q2HTK5 H+-transporting two-sector ATPase, alpha/beta subunit, central
region n=1 Tax=Medicago truncatula RepID=Q2HTK5_MEDTR
Length = 250
Score = 70.1 bits (170), Expect = 7e-11
Identities = 39/120 (32%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Frame = -2
Query: 367 EECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQFSITARNKNQRLGELAI-W 191
EE S HL C +W ++RWL S P +F QF+ R L + W
Sbjct: 128 EETSDHLLLHCNIFGTIWHYIYRWLNFSSVSPCDVGDHFIQFTALGGLAKTRHSILQVLW 187
Query: 190 IATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKAKFCGFTYSLYEWKSCPLECL 11
AT W +W +RN+ IF ++D I+S S+ WLKAKF + + W P L
Sbjct: 188 FATSWEIWKERNNRIFTGKQCSILQVVDKIKSLSFMWLKAKFPSLHLNYHGWWLSPFTIL 247
[14][TOP]
>UniRef100_Q2HW20 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=Q2HW20_MEDTR
Length = 192
Score = 69.7 bits (169), Expect = 9e-11
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Frame = -2
Query: 322 GVWQALHRWLGISVALPASTLANFAQFSITARNKNQRLGEL-AIWIATVWSLWIQRNSII 146
GVW +H WL + + P S ++ QF I++ R + +W A++W +W + N+ I
Sbjct: 85 GVWYLVHHWLSVPLVNPLSISNHYLQFRISSGFAIFRCSFMHLLWFASIWVIWKEMNARI 144
Query: 145 FRNNALDHSYLLDLIQSRSWHWLKAKFCGFTYSLYEWKSCPLECLSS 5
FR LL+ I+ S+ W KA F Y Y+W P C+ +
Sbjct: 145 FRAKESTMHQLLENIKLISFSWFKANSISFYYKFYDWSQNPFHCVGN 191
[15][TOP]
>UniRef100_Q2HVA2 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=Q2HVA2_MEDTR
Length = 355
Score = 69.7 bits (169), Expect = 9e-11
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Frame = -2
Query: 364 ECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQF-SITARNKNQRLGELAIWI 188
E S HLF C VW + +W+G++ +L + +F QF S+ K+++ IW
Sbjct: 234 ETSTHLFLHCNLFASVWNFILQWVGVATSLNQDVVGHFTQFRSLGGIAKSRQSILQVIWC 293
Query: 187 ATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKAKFCGFTYSLYEWKSCPLECL 11
A VW +W ++ ++IF + ++D+I+ ++ WLK K+ ++ + W + P L
Sbjct: 294 AIVWKIWKEKINMIFDDKHSSIVQVVDMIKLLTYKWLKVKYASLPFNYHGWWNSPFTLL 352
[16][TOP]
>UniRef100_Q2HV58 Putative non-LTR retroelement reverse transcriptase, related n=1
Tax=Medicago truncatula RepID=Q2HV58_MEDTR
Length = 373
Score = 68.9 bits (167), Expect = 2e-10
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Frame = -2
Query: 394 LTCPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQF-SITARNKN 218
++C EE HLFF C + +W + WLG + + QF ++ +KN
Sbjct: 241 VSCGALCGKEEEMDHLFFQCDYYGQLWLLISNWLGFVTVFHGNLYTHDNQFCALRDFSKN 300
Query: 217 QRLGELAIWIATVWSLWIQRNSIIFRNNALDH-SYLLDLIQSRSWHWLKAKFCGFTYSLY 41
IWI+ ++++W RN IF+N +DH LL+ ++ +++ WLKA + F +
Sbjct: 301 SMKAFTIIWISVLFTIWKDRNRRIFQNQ-IDHLEALLERVKLQTFWWLKANYITFAFDYP 359
Query: 40 EWKSCPLECLSS 5
W+ PL CL +
Sbjct: 360 FWRQNPLCCLQT 371
[17][TOP]
>UniRef100_Q2HTU8 H+-transporting two-sector ATPase, alpha/beta subunit, central
region, related n=1 Tax=Medicago truncatula
RepID=Q2HTU8_MEDTR
Length = 248
Score = 68.6 bits (166), Expect = 2e-10
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
Frame = -2
Query: 397 DLTCPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQF-SITARNK 221
+++C EE HLFF C + +W L WLG + + QF ++ +K
Sbjct: 118 NVSCGALCGKEEKRDHLFFQCAYYGRLWLMLSDWLGFVTVFNGNLYTHANQFCALGGFSK 177
Query: 220 NQRLGELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKAKFCGFTYSLY 41
N IWI+ ++++W RN IF+N + LL+ ++ +++ WLKA + F +
Sbjct: 178 NYMKAFTIIWISVLYTIWKDRNRRIFQNQIVLLEVLLERVKLQTFWWLKANYILFVFYYS 237
Query: 40 EWKSCPLECL 11
W+ L CL
Sbjct: 238 YWRKNLLPCL 247
[18][TOP]
>UniRef100_A4Q7N6 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=A4Q7N6_MEDTR
Length = 179
Score = 67.4 bits (163), Expect = 5e-10
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Frame = -2
Query: 370 VEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQFS-ITARNKNQRLGELAI 194
V E + HL F C S+G+WQ + WL S AL + L N QF+ + R + I
Sbjct: 69 VVETTSHLLFECPASIGLWQKILLWLNHSCALHNNALQNLNQFAGLAGRGRVHEARISVI 128
Query: 193 WIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHW 80
W A VW LW +RN IF N ++ + + SW W
Sbjct: 129 WFACVWILWNRRNEKIFSNITSSEDDWIEEVNTLSWKW 166
[19][TOP]
>UniRef100_B9NGM3 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NGM3_POPTR
Length = 124
Score = 61.2 bits (147), Expect = 3e-08
Identities = 28/96 (29%), Positives = 45/96 (46%)
Frame = -2
Query: 388 CPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQFSITARNKNQRL 209
CP C EE HLF C +W L W G++ P + F+Q+ K Q+
Sbjct: 26 CPICLVEEEMVDHLFIHCYKHWLIWSKLINWWGLAWCCPRNLTNLFSQWDSLVYGKFQKK 85
Query: 208 GELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLI 101
+ ++ + WS+W+ RN +IF+ ++ L LI
Sbjct: 86 AWVMLFFSVTWSMWLLRNDVIFKQKIPNYDTLFFLI 121
[20][TOP]
>UniRef100_B9FGQ0 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9FGQ0_ORYSJ
Length = 302
Score = 61.2 bits (147), Expect = 3e-08
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Frame = -2
Query: 397 DLTCPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQFSITARNK- 221
D+ CP C +E HLF +C ++ VW+ + W + +PA + A++ +T R +
Sbjct: 156 DVLCPLCQREDEDCHHLFVSCDYTAAVWRKMRAWCNANFTIPADKNRSLAEWWLTERRRF 215
Query: 220 --NQRLGELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHW 80
+ R + ++ W +W +RN+ IF+N + H L D I + W
Sbjct: 216 RTSYRTDFDSAFMLICWVIWKERNARIFQNVSRTHESLEDDITEETAVW 264
[21][TOP]
>UniRef100_Q2QNF1 Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa
Japonica Group RepID=Q2QNF1_ORYSJ
Length = 1432
Score = 60.5 bits (145), Expect = 6e-08
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Frame = -2
Query: 388 CPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQFSITAR---NKN 218
C C +E HLF TC FS VWQ L W+ + LP + + AR +
Sbjct: 1318 CVLCQREQEDCLHLFITCDFSRRVWQLLRAWVNVDFPLPGQAGEGLIGWWMVARCHFRSS 1377
Query: 217 QRLGELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHW 80
R +++ T W +W +RN+ IF++ LL+ I+ W W
Sbjct: 1378 YRSNFDSVFALTCWLIWKERNARIFQHKQQTVEQLLEDIKEEVWMW 1423
[22][TOP]
>UniRef100_B9GDU1 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9GDU1_ORYSJ
Length = 394
Score = 60.5 bits (145), Expect = 6e-08
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Frame = -2
Query: 388 CPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQFSITAR---NKN 218
C C +E HLF TC FS VWQ L W+ + LP + + AR +
Sbjct: 280 CVLCQREQEDCLHLFITCDFSRRVWQLLRAWVNVDFPLPGQAGEGLIGWWMVARCHFRSS 339
Query: 217 QRLGELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHW 80
R +++ T W +W +RN+ IF++ LL+ I+ W W
Sbjct: 340 YRSNFDSVFALTCWLIWKERNARIFQHKQQTVEQLLEDIKEEVWMW 385
[23][TOP]
>UniRef100_C5YGG0 Putative uncharacterized protein Sb06g016627 (Fragment) n=1
Tax=Sorghum bicolor RepID=C5YGG0_SORBI
Length = 448
Score = 58.2 bits (139), Expect = 3e-07
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Frame = -2
Query: 388 CPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPAS--TLANFAQFSITARNKNQ 215
C C E + HLF C FS +W + W G P++ + + Q+ + N N
Sbjct: 318 CHLCVRNLETTSHLFQECKFSRMIWDKVSTWTGAVNLKPSNWGCIDDMEQWFVNMGNSNN 377
Query: 214 ---RLGELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKA 71
R G +I I T+W +W +RN+ +F N S +L IQ + W+++
Sbjct: 378 NEVRDGIRSIVILTIWEIWRERNNRVFNNFCSTPSQVLSTIQDEAKTWIRS 428
[24][TOP]
>UniRef100_Q7G6D1 Putative non-LTR retroelement reverse transcriptase n=2 Tax=Oryza
sativa RepID=Q7G6D1_ORYSJ
Length = 362
Score = 57.0 bits (136), Expect = 6e-07
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = -2
Query: 397 DLTCPFCT-TVEECSGHLFFTCVFSMGVWQAL--HRWLGISVALPASTLANFAQFSITAR 227
DLTC C + E H+FF C +S+ WQ L H +L + NF Q + AR
Sbjct: 245 DLTCVLCYGDLRETKLHIFFACPYSLRCWQLLGFHWFLNL----------NFFQMVVLAR 294
Query: 226 NKNQRLGELAIWIATVWSLWIQRNSIIFRN 137
N+ G L I+ W +W QRN +IF+N
Sbjct: 295 NRFGMKGFLEIFFIAAWYIWKQRNGMIFQN 324
[25][TOP]
>UniRef100_C5X2P6 Putative uncharacterized protein Sb02g007880 n=1 Tax=Sorghum
bicolor RepID=C5X2P6_SORBI
Length = 475
Score = 57.0 bits (136), Expect = 6e-07
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Frame = -2
Query: 388 CPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPAS-----TLANFAQFSITARN 224
C C E + HLFF C FS+ VW + W G S P+S L + + TA +
Sbjct: 356 CALCERNLETAHHLFFECPFSLEVWHGIAVWSGCSSLEPSSWTEEDDLEDQYSQAFTAGD 415
Query: 223 KNQRLGELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHW 80
K + ++ I T+W++W RN +IFR + +I+ + HW
Sbjct: 416 KKGQ----SLLILTLWNIWNCRNEVIFRGVRKTVQVTITMIKDTAQHW 459
[26][TOP]
>UniRef100_Q8W2Y2 Putative reverse transcriptase n=1 Tax=Oryza sativa Japonica Group
RepID=Q8W2Y2_ORYSJ
Length = 581
Score = 56.6 bits (135), Expect = 8e-07
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = -2
Query: 388 CPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQ--FSITARNKNQ 215
CP C V+E + L C + +W + RW G + + S + + +++ + N
Sbjct: 458 CPLCYNVDESALLLLAKCKLTKRIWAEMQRWTGTDLQMDNSESCHSVEQWWTLVTESPNT 517
Query: 214 RLGELAIWIATV-WSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKA 71
L + + W +W +RN+ IFRNNA S +L I+ W+KA
Sbjct: 518 PCKPLRTLVILISWEIWCERNARIFRNNASTPSSILAKIKEEGRAWVKA 566
[27][TOP]
>UniRef100_Q7XX00 OSJNBa0079F16.5 protein n=1 Tax=Oryza sativa RepID=Q7XX00_ORYSA
Length = 153
Score = 56.6 bits (135), Expect = 8e-07
Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Frame = -2
Query: 388 CPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQFSITARNK--NQ 215
C C V+E HLF +C ++ VW+ + W+G+ LP + + ++ + R K N
Sbjct: 33 CQLCLVVDEDYEHLFVSCTYTTRVWRMIKGWIGVGFLLPYESGLDLGEWWLAMRQKFRNN 92
Query: 214 RLGEL-AIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKA 71
+ + ++ + W +W +RN+ +F+N +L I+ W +A
Sbjct: 93 YMDAIDSLVLLICWMVWKERNARVFQNQRRSAGFLFGSIKEEVAIWKEA 141
[28][TOP]
>UniRef100_Q1SWK7 Helix-turn-helix, Fis-type, related n=1 Tax=Medicago truncatula
RepID=Q1SWK7_MEDTR
Length = 80
Score = 55.8 bits (133), Expect = 1e-06
Identities = 26/62 (41%), Positives = 36/62 (58%)
Frame = -2
Query: 196 IWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKAKFCGFTYSLYEWKSCPLE 17
IW A VW++W RN+ IF N A D + LLD ++ S+ WLKA +S +W PL
Sbjct: 15 IWKACVWTVWKDRNNRIFNNKARDLTQLLDNVKFVSFSWLKANRLASAFSYNDWWRHPLT 74
Query: 16 CL 11
C+
Sbjct: 75 CM 76
[29][TOP]
>UniRef100_Q2HV50 H+-transporting two-sector ATPase, alpha/beta subunit, central
region, related n=1 Tax=Medicago truncatula
RepID=Q2HV50_MEDTR
Length = 210
Score = 55.5 bits (132), Expect = 2e-06
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Frame = -2
Query: 379 CTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQF-SITARNKNQRLGE 203
C +E+ HLF +C F +W + WL + P + QF ++ +KN R
Sbjct: 113 CGMMEDAK-HLFLSCDFFGKLWYDISHWLSYHIVFPEHVSDHLYQFGTLGGFSKNNRSAF 171
Query: 202 LAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSW 86
IW++ VW +W++ N+ +F + LLD ++ +S+
Sbjct: 172 HLIWLSCVWVIWLEMNARVFHQTEASINQLLDKVKLQSY 210
[30][TOP]
>UniRef100_B9GGF6 Glutamate-gated kainate-type ion channel receptor subunit GluR5 n=1
Tax=Populus trichocarpa RepID=B9GGF6_POPTR
Length = 1005
Score = 55.1 bits (131), Expect = 2e-06
Identities = 28/82 (34%), Positives = 36/82 (43%)
Frame = -2
Query: 388 CPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQFSITARNKNQRL 209
CPFC E HLF C S +W L W G LP N ++S + QR
Sbjct: 918 CPFCCKEIETIHHLFHLCPTSWSLWGRLFSWFGCVGCLPKDPNHNLQEWSGLLKGNFQRQ 977
Query: 208 GELAIWIATVWSLWIQRNSIIF 143
+ WS+WI RN++IF
Sbjct: 978 AITLLCKGLYWSIWIARNNMIF 999
[31][TOP]
>UniRef100_B9F246 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9F246_ORYSJ
Length = 1394
Score = 55.1 bits (131), Expect = 2e-06
Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 4/128 (3%)
Frame = -2
Query: 388 CPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQFSITAR---NKN 218
C C + E HLF TC F+ VW+ + W+GI+ LP A + + AR
Sbjct: 553 CSLCQSEAEDCLHLFVTCAFTRRVWRMMQGWIGINFLLPTENEPALADWWMKARMAFRTG 612
Query: 217 QRLGELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHW-LKAKFCGFTYSLY 41
R +++ T W LW + N+ +F L+ I+ + W F +
Sbjct: 613 YRSIFDSVFALTCWLLWKECNARVFEQKFRSIEQLVQDIKEEAIVWKTTGVFTTCNSEIT 672
Query: 40 EWKSCPLE 17
WK PLE
Sbjct: 673 SWKILPLE 680
[32][TOP]
>UniRef100_Q8LK00 Putative reverse transcriptase n=1 Tax=Sorghum bicolor
RepID=Q8LK00_SORBI
Length = 1323
Score = 54.3 bits (129), Expect = 4e-06
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Frame = -2
Query: 388 CPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLAN------FAQFSITAR 227
C C E + HLFF C +S VWQA+ W PAS F+Q T
Sbjct: 1201 CALCERNLETAHHLFFECPYSRLVWQAVSSWSSCPSLQPASWEDRSRLEDCFSQTLTTGE 1260
Query: 226 NKNQRLGELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHW 80
K L I T+WS+W +RN+++FR + L+ I+ + W
Sbjct: 1261 KKAHTLA-----ILTLWSIWNRRNAVVFREDRKTTISLVVEIKDMARQW 1304
[33][TOP]
>UniRef100_Q2R299 Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa
Japonica Group RepID=Q2R299_ORYSJ
Length = 933
Score = 54.3 bits (129), Expect = 4e-06
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Frame = -2
Query: 388 CPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQFSITAR---NKN 218
C C + E HLF TC F+ VW+ + W+GI+ LP A + + AR
Sbjct: 814 CSLCQSEAEDCLHLFVTCAFTRRVWRMMQGWIGINFLLPTENEPALADWWMKARMAFRTG 873
Query: 217 QRLGELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKA 71
R +++ T W LW +RN+ +F L+ I+ + W A
Sbjct: 874 YRSIFDSVFALTCWLLWKERNARVFEQKFRSMEQLVQDIKEEAIVWKTA 922
[34][TOP]
>UniRef100_C7J8B3 Os11g0573700 protein n=1 Tax=Oryza sativa Japonica Group
RepID=C7J8B3_ORYSJ
Length = 700
Score = 54.3 bits (129), Expect = 4e-06
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Frame = -2
Query: 388 CPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQFSITAR---NKN 218
C C + E HLF TC F+ VW+ + W+GI+ LP A + + AR
Sbjct: 581 CSLCQSEAEDCLHLFVTCAFTRRVWRMMQGWIGINFLLPTENEPALADWWMKARMAFRTG 640
Query: 217 QRLGELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKA 71
R +++ T W LW +RN+ +F L+ I+ + W A
Sbjct: 641 YRSIFDSVFALTCWLLWKERNARVFEQKFRSMEQLVQDIKEEAIVWKTA 689
[35][TOP]
>UniRef100_C5YBC0 Putative uncharacterized protein Sb06g020935 (Fragment) n=1
Tax=Sorghum bicolor RepID=C5YBC0_SORBI
Length = 449
Score = 54.3 bits (129), Expect = 4e-06
Identities = 36/112 (32%), Positives = 49/112 (43%), Gaps = 2/112 (1%)
Frame = -2
Query: 388 CPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALP--ASTLANFAQFSITARNKNQ 215
C C E + HL CVF+ VW L +G+ LP AS L + Q S N
Sbjct: 330 CALCDQQPETADHLLVACVFAREVWHRLLSAIGLVHLLPSDASRLVGWWQESRALLPHNL 389
Query: 214 RLGELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKAKFCG 59
R ++ + WSLW +RN+ F N + L I+ + WL A F G
Sbjct: 390 RRSFDSLVVLVSWSLWKERNARTFDNTSCTPPQTLAKIKEEANAWLAAGFRG 441
[36][TOP]
>UniRef100_B9GBA8 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9GBA8_ORYSJ
Length = 366
Score = 54.3 bits (129), Expect = 4e-06
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Frame = -2
Query: 388 CPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQFSITAR---NKN 218
C C + E HLF TC F+ VW+ + W+GI+ LP A + + AR
Sbjct: 247 CSLCQSEAEDCLHLFVTCAFTRRVWRMMQGWIGINFLLPTENEPALADWWMKARMAFRTG 306
Query: 217 QRLGELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKA 71
R +++ T W LW +RN+ +F L+ I+ + W A
Sbjct: 307 YRSIFDSVFALTCWLLWKERNARVFEQKFRSMEQLVQDIKEEAIVWKTA 355
[37][TOP]
>UniRef100_C5YAK4 Putative uncharacterized protein Sb06g033056 (Fragment) n=1
Tax=Sorghum bicolor RepID=C5YAK4_SORBI
Length = 206
Score = 53.9 bits (128), Expect = 5e-06
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 8/115 (6%)
Frame = -2
Query: 388 CPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLA------NFAQFSITAR 227
C C E + HLFF C FS+ VW + W G S P+S ++Q
Sbjct: 87 CALCERNLETAHHLFFECPFSLEVWHGIAVWSGCSSLEPSSWTKEDDLEDQYSQAFAAGD 146
Query: 226 NKNQRLGELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQ--SRSWHWLKAK 68
K Q ++ I T+W++W RN +IFR + +I+ ++ W W K
Sbjct: 147 KKGQ-----SLLILTLWNIWNCRNEVIFRGVRKTVQVAIAMIKDTAQQWSWAGCK 196
[38][TOP]
>UniRef100_C5Y810 Putative uncharacterized protein Sb05g026830 n=1 Tax=Sorghum
bicolor RepID=C5Y810_SORBI
Length = 455
Score = 53.9 bits (128), Expect = 5e-06
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Frame = -2
Query: 388 CPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLAN------FAQFSITAR 227
C C E + HLFF C +S VWQ + W S PA+ F+Q +
Sbjct: 333 CALCERNLETAHHLFFECPYSRLVWQLVASWSSCSSLHPANWEVKHELEDWFSQMLASGG 392
Query: 226 NKNQRLGELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHW 80
K+ L I T+WS+W +RN++IFR LL I+ + W
Sbjct: 393 KKSHTLA-----ILTLWSIWNRRNAVIFRQEWRTAHALLIEIKDTAHQW 436
[39][TOP]
>UniRef100_C5XSH0 Putative uncharacterized protein Sb04g020080 n=1 Tax=Sorghum
bicolor RepID=C5XSH0_SORBI
Length = 377
Score = 53.5 bits (127), Expect = 7e-06
Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Frame = -2
Query: 388 CPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLAN------FAQFSITAR 227
C C E + HLFF C +S VWQ + W S PA+ F+Q +
Sbjct: 255 CALCERNLETAHHLFFECPYSRLVWQLVASWSSCSSLHPANWEVKHELEDWFSQMLASGG 314
Query: 226 NKNQRLGELAIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHW 80
K+ L I T+WS+W +RN+++FR LL I+ + W
Sbjct: 315 KKSHTLA-----ILTLWSIWNRRNAVVFRQEWRTARALLIEIKDTAHQW 358
[40][TOP]
>UniRef100_C5YF23 Putative uncharacterized protein Sb06g027160 n=1 Tax=Sorghum bicolor
RepID=C5YF23_SORBI
Length = 1400
Score = 53.1 bits (126), Expect = 9e-06
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Frame = -2
Query: 388 CPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPAS--TLANFAQFSITARNKNQ 215
C C E + HLF C FS +W + W G P++ + + Q+ + N N
Sbjct: 1267 CQLCVRNLETTSHLFQECKFSRMIWDKVSTWTGAVNLKPSNWGCIDDMEQWFVNMGNSNN 1326
Query: 214 ---RLGELAIWIAT---VWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKA 71
R G +I I T +W +W +RN+ +F N S +L IQ + W+++
Sbjct: 1327 NEVRDGIRSIVILTIWEIWKIWRERNNRVFNNFCSTPSQVLSTIQDEAKTWIRS 1380