[UP]
[1][TOP]
>UniRef100_P12852 Oxygen-evolving enhancer protein 3, chloroplastic n=2
Tax=Chlamydomonas reinhardtii RepID=PSBQ_CHLRE
Length = 199
Score = 245 bits (625), Expect = 1e-63
Identities = 129/129 (100%), Positives = 129/129 (100%)
Frame = +3
Query: 6 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDD 185
MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDD
Sbjct: 1 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDD 60
Query: 186 RSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQKSY 365
RSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQKSY
Sbjct: 61 RSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQKSY 120
Query: 366 WTEAREQLR 392
WTEAREQLR
Sbjct: 121 WTEAREQLR 129
[2][TOP]
>UniRef100_Q1WLV1 Chloroplast oxygen-evolving protein 3 n=1 Tax=Chlamydomonas incerta
RepID=Q1WLV1_CHLIN
Length = 200
Score = 231 bits (588), Expect = 2e-59
Identities = 123/130 (94%), Positives = 126/130 (96%), Gaps = 1/130 (0%)
Frame = +3
Query: 6 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALAL-TPVDLFD 182
MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAA A TPVDLFD
Sbjct: 1 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAAFAAATPVDLFD 60
Query: 183 DRSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQKS 362
DRS R+RGFDLIYEARDLDLPQNVREGFTQARASL+ETKKRVKESEARIDADLDVFI+KS
Sbjct: 61 DRSARERGFDLIYEARDLDLPQNVREGFTQARASLEETKKRVKESEARIDADLDVFIKKS 120
Query: 363 YWTEAREQLR 392
YWTEAREQLR
Sbjct: 121 YWTEAREQLR 130
[3][TOP]
>UniRef100_Q41643 Oxygen-evolving enhancer protein 3, chloroplastic n=1 Tax=Volvox
carteri RepID=PSBQ_VOLCA
Length = 202
Score = 184 bits (467), Expect = 3e-45
Identities = 100/131 (76%), Positives = 109/131 (83%), Gaps = 2/131 (1%)
Frame = +3
Query: 6 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAV--APKAALALTPVDLF 179
MALA KVA+RPAVASRRG VVVRAS ESRRAVLGGLLAS V A+ A KA A TPVDLF
Sbjct: 1 MALAQKVASRPAVASRRGVVVVRASVESRRAVLGGLLASTVVALTSANKAQAAATPVDLF 60
Query: 180 DDRSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQK 359
DDR VR+ GFDLIYEARDLDL Q+ R+G QAR S+D T KRVKESE RIDADL+ FI+K
Sbjct: 61 DDRKVRETGFDLIYEARDLDLRQSARDGLDQARGSIDATIKRVKESETRIDADLEGFIKK 120
Query: 360 SYWTEAREQLR 392
+YWTEAREQLR
Sbjct: 121 NYWTEAREQLR 131
[4][TOP]
>UniRef100_B5A4I8 Photosystem II oxygen evolving enhancer protein 3 n=1
Tax=Gymnochlora stellata RepID=B5A4I8_GYMST
Length = 222
Score = 96.7 bits (239), Expect = 7e-19
Identities = 56/123 (45%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
Frame = +3
Query: 27 ATRPAVASRRGAVVVRASGE-SRRAVLGGLLASAVAAVAPKAALALTPVDLFDDRSVRDR 203
ATR + R VRA + RR + GL + AV A A+T DL DDR +
Sbjct: 38 ATRASTGCRN----VRAQAQMDRRTAMTGLFGAM--AVGANKAFAVTSPDLIDDRKAKST 91
Query: 204 GFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQKSYWTEARE 383
GFD+IYEARDL L Q+ R+GFTQAR+ L ETK RV ++E ++ + F+ K YWTE R
Sbjct: 92 GFDIIYEARDLSLDQDTRDGFTQARSGLKETKTRVMDAEKKL-TEAGAFVDKKYWTEGRN 150
Query: 384 QLR 392
LR
Sbjct: 151 VLR 153
[5][TOP]
>UniRef100_Q7XYI7 Oxygen-evolving enhancer protein 3 n=1 Tax=Bigelowiella natans
RepID=Q7XYI7_BIGNA
Length = 237
Score = 96.3 bits (238), Expect = 9e-19
Identities = 61/130 (46%), Positives = 77/130 (59%)
Frame = +3
Query: 3 KMALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFD 182
++ALA TR A S R V A+ RRAVLGGL +A A K+A AL V L D
Sbjct: 46 ELALAQ---TRTAGVSCRN--VRTAAQMDRRAVLGGLFGTAAFGAA-KSAQALQDVQLID 99
Query: 183 DRSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQKS 362
DR + GF++IYEARDL L Q+ R+G TQAR L ETKKR +E ++ + F+ K
Sbjct: 100 DRKAKKNGFEIIYEARDLSLDQDTRDGMTQARTGLQETKKRAIGAEKKL-TEAGSFVDKK 158
Query: 363 YWTEAREQLR 392
YW+E R LR
Sbjct: 159 YWSEGRTVLR 168
[6][TOP]
>UniRef100_C1EI28 Oxygen-evolving enhancer protein 3, chloroplast n=1 Tax=Micromonas
sp. RCC299 RepID=C1EI28_9CHLO
Length = 205
Score = 78.6 bits (192), Expect = 2e-13
Identities = 43/117 (36%), Positives = 70/117 (59%), Gaps = 4/117 (3%)
Frame = +3
Query: 54 RGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDDRSVRDRGFDLIYEARD 233
+ +V V AS ++R+A LLA+ V A+ A+AL ++L D+R G LIYEARD
Sbjct: 26 KASVAVTASADARKAA--SLLAAGVIALQATPAMALNMIELQDERQTNKNGLQLIYEARD 83
Query: 234 LDLPQNVREG----FTQARASLDETKKRVKESEARIDADLDVFIQKSYWTEAREQLR 392
L++ Q+VR+ F+ + + +T R ES R++ D+ ++ K+YWT+A +LR
Sbjct: 84 LNITQSVRQDGNSRFSFQKLTTAQTATRASESIKRLNTDVGEYVGKAYWTQAANELR 140
[7][TOP]
>UniRef100_C1N657 Oxygen-evolving enhancer protein 3, chloroplast n=1 Tax=Micromonas
pusilla CCMP1545 RepID=C1N657_9CHLO
Length = 205
Score = 72.4 bits (176), Expect = 1e-11
Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
Frame = +3
Query: 24 VATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDDRSVRDR 203
V PAV VV + S++AV L + V A + ALAL ++L D R
Sbjct: 16 VVAAPAVRKAEKVSVVVKADMSKKAV--SLAVAGVVAFSAMPALALNQIELQDKRVTNKE 73
Query: 204 GFDLIYEARDLDLPQNVREG----FTQARASLDETKKRVKESEARIDADLDVFIQKSYWT 371
G LIYEARDL++ ++ R+ F + + ++TK R ES RI+ D+ +++K+YW+
Sbjct: 74 GLQLIYEARDLNIAESTRQDGPSRFAFQKLNSNQTKARATESLNRINKDVPEYVEKAYWS 133
Query: 372 EAREQLR 392
+A +LR
Sbjct: 134 QAGMELR 140
[8][TOP]
>UniRef100_A4S8C8 PsbQ, PSII-Q, OEE3, photosystem II polypeptide, oxygen evolving
enhancer 3 n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S8C8_OSTLU
Length = 204
Score = 72.0 bits (175), Expect = 2e-11
Identities = 49/132 (37%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Frame = +3
Query: 9 ALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDDR 188
A+A K+ T +V + VV+AS + +AV + + V + P AA A T ++L D R
Sbjct: 14 AIAQKITTSKSVKAN---TVVKAS--ANKAVSLAAVTAVVLSATP-AAFAATGIELTDKR 67
Query: 189 SVRDRGFDLIYEARDLDLPQNVREG----FTQARASLDETKKRVKESEARIDADLDVFIQ 356
G LIYEARDL+L Q R F+ + S ET R ES RI+ D+ ++
Sbjct: 68 VENQTGLQLIYEARDLELDQKPRSDGPSRFSFQKLSQKETAARATESVTRINKDVGEYVG 127
Query: 357 KSYWTEAREQLR 392
K YWT+A +LR
Sbjct: 128 KKYWTQASNELR 139
[9][TOP]
>UniRef100_UPI0000383963 COG0513: Superfamily II DNA and RNA helicases n=1
Tax=Magnetospirillum magnetotacticum MS-1
RepID=UPI0000383963
Length = 551
Score = 59.3 bits (142), Expect = 1e-07
Identities = 42/105 (40%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Frame = -3
Query: 312 PSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSRGREPSGHRTGRRGSEQGQPWGPR 133
P R RPG+R+ RG+ G G GRG R+ +RG P G + G R ++ GPR
Sbjct: 434 PPRQPQGRPGQRQGRPGGRGQEGRGEGRGEHRAHEARGGRPGG-QPGHRQDQRQDSRGPR 492
Query: 132 -RRQRSPADRPAPRGATRRRRAQPRHPGGRP---RRGG*QP*RRG 10
QRS RP G R + A+P+ GGRP RRG +P R G
Sbjct: 493 PDGQRSDQRRPERAGEGRPQGARPQ--GGRPNDGRRGDARPARSG 535
[10][TOP]
>UniRef100_B4VB08 Polyketide synthase type I n=1 Tax=Streptomyces sp. Mg1
RepID=B4VB08_9ACTO
Length = 1612
Score = 57.8 bits (138), Expect = 4e-07
Identities = 46/113 (40%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Frame = -3
Query: 342 PGQRRCGPQTPSRA---------SWSRPGKR-EPG*SPRGRSGAGPGRGPRRSGRSRGRE 193
PG RR + P RA + PG+R +P GR+ GPG P R R+ G
Sbjct: 1470 PGVRRPARRRPHRAPRVAVRRRMDEAAPGRRRDPRRRAVGRTRRGPGGVPHRR-RTAGAP 1528
Query: 192 PSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPRHPGGRPRRG 34
P HR R G+ + +P G RRR R PA R PR R RR R PG RPR+G
Sbjct: 1529 PRPHRAAR-GTRRRRP-GTRRRGR-PAVRDGPRRRPRGRRPDRRPPGARPRQG 1578
[11][TOP]
>UniRef100_UPI0000DC1A1B UPI0000DC1A1B related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0000DC1A1B
Length = 491
Score = 57.0 bits (136), Expect = 6e-07
Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Frame = -3
Query: 381 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 205
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 203 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 262
Query: 204 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 58
R R P+ R GR S P R R R+PA R PA RG +R RRR++ R
Sbjct: 263 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRRRSRTRS 318
Query: 57 PGGRPRRGG*QP*RRGPS 4
P R R Q R G S
Sbjct: 319 PVRRRSRSRSQARRSGRS 336
[12][TOP]
>UniRef100_UPI0000DA333B PREDICTED: similar to serine/arginine repetitive matrix 2 n=1
Tax=Rattus norvegicus RepID=UPI0000DA333B
Length = 2707
Score = 57.0 bits (136), Expect = 6e-07
Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Frame = -3
Query: 381 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 205
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 510 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 569
Query: 204 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 58
R R P+ R GR S P R R R+PA R PA RG +R RRR++ R
Sbjct: 570 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRRRSRTRS 625
Query: 57 PGGRPRRGG*QP*RRGPS 4
P R R Q R G S
Sbjct: 626 PVRRRSRSRSQARRSGRS 643
[13][TOP]
>UniRef100_UPI0000484FB6 serine/arginine repetitive matrix 2 n=2 Tax=Mus musculus
RepID=UPI0000484FB6
Length = 2703
Score = 57.0 bits (136), Expect = 6e-07
Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Frame = -3
Query: 381 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 205
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 511 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 570
Query: 204 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 58
R R P+ R GR S P R R R+PA R PA RG +R RRR++ R
Sbjct: 571 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRS 626
Query: 57 PGGRPRRGG*QP*RRGPS 4
P R R Q R G S
Sbjct: 627 PVRRRSRSRSQARRSGRS 644
[14][TOP]
>UniRef100_Q3TR34 Putative uncharacterized protein (Fragment) n=1 Tax=Mus musculus
RepID=Q3TR34_MOUSE
Length = 493
Score = 57.0 bits (136), Expect = 6e-07
Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Frame = -3
Query: 381 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 205
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 205 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 264
Query: 204 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 58
R R P+ R GR S P R R R+PA R PA RG +R RRR++ R
Sbjct: 265 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRS 320
Query: 57 PGGRPRRGG*QP*RRGPS 4
P R R Q R G S
Sbjct: 321 PVRRRSRSRSQARRSGRS 338
[15][TOP]
>UniRef100_B4V2Y2 Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1
RepID=B4V2Y2_9ACTO
Length = 576
Score = 57.0 bits (136), Expect = 6e-07
Identities = 55/149 (36%), Positives = 62/149 (41%), Gaps = 25/149 (16%)
Frame = -3
Query: 384 AREPQSSRTSG*TRPGQRRCGPQTPSRASWSRPGKREPG*S-----PRGRSGAGP-GRGP 223
A PQ R + RP R P P A RPG+R PG + P+G GP G P
Sbjct: 14 AARPQPGRAA---RPPHRVRLPGLPPPAPPLRPGERHPGHAVHRSPPQGAPRTGPRGTRP 70
Query: 222 RRSGRSRGREPSGHRTGRRGSEQGQPWGPRR----------------RQRSPADRPAPRG 91
R+G R R P GRR +G GPRR R+R RPA R
Sbjct: 71 GRAGAPRRRRPRP-ALGRRAPARGHRPGPRRQALAAALRRADRQSGLRERRLRARPAGRA 129
Query: 90 ATR---RRRAQPRHPGGRPRRGG*QP*RR 13
A R RRR PR G RPR P RR
Sbjct: 130 ARRRDDRRRHHPRPRGRRPRPPDGHPPRR 158
[16][TOP]
>UniRef100_Q8BTI8-3 Isoform 3 of Serine/arginine repetitive matrix protein 2 n=1
Tax=Mus musculus RepID=Q8BTI8-3
Length = 2603
Score = 57.0 bits (136), Expect = 6e-07
Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Frame = -3
Query: 381 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 205
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 511 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 570
Query: 204 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 58
R R P+ R GR S P R R R+PA R PA RG +R RRR++ R
Sbjct: 571 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRRRSRTRS 626
Query: 57 PGGRPRRGG*QP*RRGPS 4
P R R Q R G S
Sbjct: 627 PVRRRSRSRSQARRSGRS 644
[17][TOP]
>UniRef100_Q8BTI8 Serine/arginine repetitive matrix protein 2 n=2 Tax=Mus musculus
RepID=SRRM2_MOUSE
Length = 2703
Score = 57.0 bits (136), Expect = 6e-07
Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Frame = -3
Query: 381 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 205
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 511 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 570
Query: 204 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 58
R R P+ R GR S P R R R+PA R PA RG +R RRR++ R
Sbjct: 571 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRRRSRTRS 626
Query: 57 PGGRPRRGG*QP*RRGPS 4
P R R Q R G S
Sbjct: 627 PVRRRSRSRSQARRSGRS 644
[18][TOP]
>UniRef100_UPI0001B4F57C transcriptional regulatory protein n=1 Tax=Streptomyces lividans TK24
RepID=UPI0001B4F57C
Length = 1271
Score = 56.2 bits (134), Expect = 1e-06
Identities = 43/123 (34%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Frame = -3
Query: 381 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPR------ 220
R + RT+G TRPG+ P P A ++ +R R R A P R PR
Sbjct: 849 RRTRRGRTAGGTRPGRTAPRPAAPDAARAAQHPRRHRCLPRRPRPAARPRRRPRARTRLR 908
Query: 219 --RSGRSRGREPSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPRHPGGR 46
+ GR R P HR RRG +P P R P P A R R + R PGGR
Sbjct: 909 THQPGRPRPDGPGAHRPHRRGPALRRPVRPARGAGELGAEPLPVRAGRAAR-RHRRPGGR 967
Query: 45 PRR 37
P R
Sbjct: 968 PAR 970
[19][TOP]
>UniRef100_UPI0000F2C98A PREDICTED: similar to CG9434-PA n=1 Tax=Monodelphis domestica
RepID=UPI0000F2C98A
Length = 412
Score = 55.8 bits (133), Expect = 1e-06
Identities = 46/128 (35%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
Frame = -3
Query: 387 AAREPQSSRTSG*TRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRS-G 211
A R + R G RP R +P A W RP SPRG + PG R S G
Sbjct: 118 APRGAEQPRPRGAERPRPRGTNRPSPRGAGWPRPRGAGRS-SPRGANWPSPGEAERPSPG 176
Query: 210 RSRGREPSG-HRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPRHPGGRPRRG 34
+ P G +R RG+EQ +P G R + +RP+PRGA R PR G RG
Sbjct: 177 GAEWPRPRGTNRPSPRGAEQPRPRGAERPRPRGTNRPSPRGAGWPR---PRGAGRSSPRG 233
Query: 33 G*QP*RRG 10
P RG
Sbjct: 234 ANWPSPRG 241
Score = 53.9 bits (128), Expect = 5e-06
Identities = 49/131 (37%), Positives = 58/131 (44%), Gaps = 7/131 (5%)
Frame = -3
Query: 381 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRS-GRS 205
R + R G RP R +P A W RP SPRG + P R S G +
Sbjct: 192 RGAEQPRPRGAERPRPRGTNRPSPRGAGWPRPRGAGRS-SPRGANWPSPRGAERPSPGGA 250
Query: 204 RGREPSG-HRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRR--RRAQPRHPGG--RPR 40
P G +R RG+E+ +P G R A RP PRGA R R A PGG RPR
Sbjct: 251 EWPRPRGTNRPSPRGAERPRPRGTNRPSPRGAGRPRPRGARRSSPREANRPSPGGAERPR 310
Query: 39 -RGG*QP*RRG 10
RG +P RG
Sbjct: 311 PRGTNRPSPRG 321
[20][TOP]
>UniRef100_Q9UQ39 RNA binding protein (Fragment) n=1 Tax=Homo sapiens
RepID=Q9UQ39_HUMAN
Length = 956
Score = 55.5 bits (132), Expect = 2e-06
Identities = 46/123 (37%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Frame = -3
Query: 381 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 205
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 479 RRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 538
Query: 204 RGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQPRHPGGR 46
R R P S RT RR S P R R R+PA R R T RRR++ R P R
Sbjct: 539 RSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRR 598
Query: 45 PRR 37
R
Sbjct: 599 RSR 601
[21][TOP]
>UniRef100_Q9UQ35-2 Isoform 2 of Serine/arginine repetitive matrix protein 2 n=1
Tax=Homo sapiens RepID=Q9UQ35-2
Length = 2334
Score = 55.5 bits (132), Expect = 2e-06
Identities = 46/123 (37%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Frame = -3
Query: 381 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 205
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 514 RRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 573
Query: 204 RGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQPRHPGGR 46
R R P S RT RR S P R R R+PA R R T RRR++ R P R
Sbjct: 574 RSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRR 633
Query: 45 PRR 37
R
Sbjct: 634 RSR 636
[22][TOP]
>UniRef100_Q9UQ35 Serine/arginine repetitive matrix protein 2 n=1 Tax=Homo sapiens
RepID=SRRM2_HUMAN
Length = 2752
Score = 55.5 bits (132), Expect = 2e-06
Identities = 46/123 (37%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Frame = -3
Query: 381 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 205
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 514 RRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 573
Query: 204 RGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQPRHPGGR 46
R R P S RT RR S P R R R+PA R R T RRR++ R P R
Sbjct: 574 RSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRR 633
Query: 45 PRR 37
R
Sbjct: 634 RSR 636
[23][TOP]
>UniRef100_UPI00015FBA1A pseudogene n=1 Tax=Sorangium cellulosum 'So ce 56'
RepID=UPI00015FBA1A
Length = 1848
Score = 55.1 bits (131), Expect = 2e-06
Identities = 46/117 (39%), Positives = 51/117 (43%), Gaps = 6/117 (5%)
Frame = -3
Query: 345 RPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRG----PRRSGRSRGREPSGHR 178
RPG RR P+ R + RP R G +P + GPGR RR R RGR P
Sbjct: 1076 RPGHRRGAPR--DRRALVRPPARAAGAAPGPAARLGPGRPRAARDRRPARGRGRSPL--- 1130
Query: 177 TGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRR-RAQPRHPGGRPRRG-G*QP*RR 13
PRRR RP G RRR R PR GRPRRG G +P RR
Sbjct: 1131 -------------PRRRPLDARPRPPAAGRGRRRGRGAPRSAPGRPRRGPGARPARR 1174
[24][TOP]
>UniRef100_P39881 Homeobox protein cut-like 1 (Fragment) n=1 Tax=Canis lupus familiaris
RepID=CUX1_CANFA
Length = 975
Score = 55.1 bits (131), Expect = 2e-06
Identities = 41/113 (36%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
Frame = -3
Query: 342 PGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSRGREPSGHRTGRRG 163
PG P+ A+ S+ G E +P R A P +RS R RG P R G G
Sbjct: 787 PGAADAEESAPAAAAKSQGGPAEAAVAPEEREEA-PRPAEKRSRRPRGPGPGPGRRGGGG 845
Query: 162 SEQGQPWGPRRRQRSPADRPAPRG-ATRRRRAQPRHPGGRPRRGG*QP*RRGP 7
G P P R P+ RP R RRRR + RH G RR +P R GP
Sbjct: 846 PAPGAPAAPAAAARGPSRRPGARAKPRRRRRRRRRHARGGGRRYLSRPARGGP 898
[25][TOP]
>UniRef100_UPI00015DEFCE predicted gene, EG381818 n=1 Tax=Mus musculus RepID=UPI00015DEFCE
Length = 446
Score = 54.7 bits (130), Expect = 3e-06
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Frame = -3
Query: 324 GPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSRGREPSG---HRTGRRGSEQ 154
GPQ+P R ++ G PG P+G GP + P + G +G P G R + G++Q
Sbjct: 100 GPQSPPRPG-TQQGPPPPGPPPQG----GPQQRPPQPGNQQGPPPQGGHQQRPPQPGNQQ 154
Query: 153 GQP--WGPRRRQRSPADR--PAPRGATRRRRAQPRHPGGRPRRGG*Q 25
G P GP++R P ++ P P+G ++R QP + G P +GG Q
Sbjct: 155 GPPPQGGPQQRTPQPGNQQGPPPQGGPQQRPPQPGNQQGPPPQGGPQ 201
[26][TOP]
>UniRef100_UPI000179CC90 UPI000179CC90 related cluster n=1 Tax=Bos taurus
RepID=UPI000179CC90
Length = 2724
Score = 54.7 bits (130), Expect = 3e-06
Identities = 47/127 (37%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Frame = -3
Query: 381 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 205
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 510 RRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNAQRRGRSRSARRGRSHSRSPATRGRS 569
Query: 204 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 58
R R P+ R GR S P R R R+PA R PA RG +R RRR++ R
Sbjct: 570 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRS 625
Query: 57 PGGRPRR 37
P R R
Sbjct: 626 PVRRRSR 632
[27][TOP]
>UniRef100_UPI00015558E9 PREDICTED: similar to splicing coactivator subunit SRm300, partial
n=1 Tax=Ornithorhynchus anatinus RepID=UPI00015558E9
Length = 2677
Score = 54.3 bits (129), Expect = 4e-06
Identities = 48/143 (33%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Frame = -3
Query: 381 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRPGK-----REPG*SPRGRS--------GA 241
R +S + G +R QRR ++P R WSR R + RGRS G
Sbjct: 395 RRSRSPQRWGRSRSPQRRGRSRSPQRPGWSRSRNAQRRGRSRSTARRGRSRSKTPATRGR 454
Query: 240 GPGRGPRRSGRSRGREPSGHR------TGRRGSEQGQPWGPRRRQRSPADRPAPRGATRR 79
R P R GRSR R P+ R T RR + R R R+PA R + + R
Sbjct: 455 SRSRTPARRGRSRSRTPTRRRSRSRTSTRRRSRSRTPTRRGRSRSRTPARRRSRTRSPVR 514
Query: 78 RRAQPRHPGGRPRRGG*QP*RRG 10
RR++ R P R R P RRG
Sbjct: 515 RRSRTRSPVRRGRSRSRTPARRG 537
[28][TOP]
>UniRef100_UPI000184A2B2 Serine/arginine repetitive matrix protein 2 (Serine/arginine-rich
splicing factor-related nuclear matrix protein of 300
kDa) (Ser/Arg- related nuclear matrix protein)
(SR-related nuclear matrix protein of 300 kDa) (Splicing
coactivator subunit SRm300) (30 n=1 Tax=Canis lupus
familiaris RepID=UPI000184A2B2
Length = 2682
Score = 54.3 bits (129), Expect = 4e-06
Identities = 52/146 (35%), Positives = 63/146 (43%), Gaps = 19/146 (13%)
Frame = -3
Query: 384 AREPQSSRTSG*TRPGQRRCGPQTPSRASWSRPG--------------KREPG*SPRGRS 247
AR SRT P +RR +TP+R SR +R SP RS
Sbjct: 522 ARRRSRSRT-----PARRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRS 576
Query: 246 GAGPGRGPRRSGRSRGREPSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATR----- 82
G R P R GRSR R P+ RRG + + P RR RS + PA RG +R
Sbjct: 577 GRSRSRTPARRGRSRSRTPA-----RRGRSRSRT--PARRGRSRSRTPARRGRSRSRTPA 629
Query: 81 RRRAQPRHPGGRPRRGG*QP*RRGPS 4
RRR++ R R R P RRG S
Sbjct: 630 RRRSRSRSVVRRGRSHSRTPQRRGRS 655
Score = 53.5 bits (127), Expect = 7e-06
Identities = 48/129 (37%), Positives = 57/129 (44%), Gaps = 13/129 (10%)
Frame = -3
Query: 384 AREPQSSRTS-----G*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGP 223
+R PQ R+ G +R QRR ++P R WSR + G S R G R P
Sbjct: 440 SRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSP 499
Query: 222 RRSGRSRGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQP 64
GRSR R P S RT RR S P R R R+PA R R T RRR++
Sbjct: 500 ATRGRSRSRTPARRARSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRT 559
Query: 63 RHPGGRPRR 37
R P R R
Sbjct: 560 RSPVRRRSR 568
[29][TOP]
>UniRef100_B8A1Z2 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B8A1Z2_MAIZE
Length = 262
Score = 54.3 bits (129), Expect = 4e-06
Identities = 41/105 (39%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Frame = -3
Query: 339 GQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSRGREPSGHRTGRRGS 160
G R + P R + R +R+PG PRG GAGPGR R GR R R G + RG+
Sbjct: 94 GPGRGAARPPRRDAQQRRHQRQPGAGPRG--GAGPGRLRPRHGRERPRRGGGRQA--RGA 149
Query: 159 EQGQPWGPRRRQRSPADRPAPRGATRR---RRAQPRHPGGRPRRG 34
G P PRR+ R R G R +R Q R G RRG
Sbjct: 150 RHGAP--PRRQHRVHGQRGRRAGRRRAAALQRVQGRRAGPGARRG 192
[30][TOP]
>UniRef100_Q21155 Rnp (Rrm rna binding domain) containing protein 5, confirmed by
transcript evidence n=1 Tax=Caenorhabditis elegans
RepID=Q21155_CAEEL
Length = 289
Score = 54.3 bits (129), Expect = 4e-06
Identities = 43/115 (37%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Frame = -3
Query: 390 AAAREPQSSRTSG*TRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPR-RS 214
A + SS +SG + G G ++ S +S R R SPR R P RG R RS
Sbjct: 11 ARSSSSSSSSSSGSSSSGSSSSGSRSSSSSSSGRSRSR----SPRRRDTRPPARGGRSRS 66
Query: 213 GRSRGREPSGHRTGRRGSEQGQPWGPRRRQRSPA----DRPAPRGATRRRRAQPR 61
RG P G R R + P PRRR+ SP+ DR G+ +RRRA PR
Sbjct: 67 PIRRGSPPRGARADRDRPMRPSPSPPRRRRPSPSPPRRDRRDRSGSRQRRRASPR 121
[31][TOP]
>UniRef100_UPI0000F2DB84 PREDICTED: similar to splicing coactivator subunit SRm300 n=1
Tax=Monodelphis domestica RepID=UPI0000F2DB84
Length = 2785
Score = 53.9 bits (128), Expect = 5e-06
Identities = 50/135 (37%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Frame = -3
Query: 381 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSR 202
R +S + G +R QRR ++P R WSR R R RS A GR RS +R
Sbjct: 522 RRSRSPQRWGRSRSPQRRGRSRSPQRPGWSR--SRNAQRRGRSRSAARRGRSRSRSPATR 579
Query: 201 GREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRHP 55
GR S R S P R R R+PA R PA RG +R RRR++ R P
Sbjct: 580 GRSRSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRSP 639
Query: 54 GGRPRRGG*QP*RRG 10
R R P RRG
Sbjct: 640 VRRRSRTR-SPARRG 653
[32][TOP]
>UniRef100_B5GGQ1 Lysophospholipase L2 n=1 Tax=Streptomyces sp. SPB74
RepID=B5GGQ1_9ACTO
Length = 296
Score = 53.9 bits (128), Expect = 5e-06
Identities = 53/143 (37%), Positives = 61/143 (42%), Gaps = 13/143 (9%)
Frame = -3
Query: 390 AAAREPQSSRTSG*TRPGQRRCGP------QTPSRASWSRPGKREPG*SPRGRSGAGPGR 229
AAAR PQ+ R RP +RR P + P RA RP R PG + R R
Sbjct: 2 AAARGPQAPRLPP-ARPRRRRARPPLRALRRPPHRARLRRPRLRPPG-ARRHR------- 52
Query: 228 GPRRSGRSRGREPSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPR---- 61
P R R G R GR + +P G RR P RP PRG R+QPR
Sbjct: 53 -PLHRRLRRHRHGRGPRGGRLARDPRRPQGRRR----PGPRPVPRGPRPDARSQPRLDAR 107
Query: 60 ---HPGGRPRRGG*QP*RRGPSL 1
PG R G +P RR PSL
Sbjct: 108 PRVRPGVPRRPHGPRPHRRLPSL 130
[33][TOP]
>UniRef100_UPI0000EB020D UPI0000EB020D related cluster n=1 Tax=Canis lupus familiaris
RepID=UPI0000EB020D
Length = 371
Score = 53.5 bits (127), Expect = 7e-06
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Frame = -3
Query: 345 RPGQRRCGPQTPSRASWSRPGKREPG*SPR--GRSGAGPGRGPRRSGRSRGREPSGHRTG 172
RPG R G SRA+ + P R G +PR G G P R RG P GH
Sbjct: 154 RPGPRPQGHPPWSRAAGTPPSSRAMGATPRRPGPRGHLPLIVQGRRDTPRGPGPRGH-PH 212
Query: 171 RRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPRHPGGRPRRGG*QP*RRGP 7
R G + P R R RP PRG + RR HP RP G P R GP
Sbjct: 213 RPGPRESPPPPRRAGPRGHPHRPGPRGHSSRRPGPQGHPPHRPGPTGATPGRAGP 267
[34][TOP]
>UniRef100_Q9EYM5 Competence factor ComEA n=1 Tax=Thermus thermophilus
RepID=Q9EYM5_THETH
Length = 298
Score = 53.1 bits (126), Expect = 9e-06
Identities = 48/139 (34%), Positives = 52/139 (37%), Gaps = 22/139 (15%)
Frame = +2
Query: 5 DGP---RL*GCYPPRRGLPPGCRGCARLRRVAPRGAGRSAGERCRRRGPQ---------- 145
DGP R G P GLPPG APRG G+ R + R PQ
Sbjct: 55 DGPGPGRRGGPLHPPEGLPPGGTQGLPRGAQAPRGPGQEGHRRPQARAPQAPRPGGQGPR 114
Query: 146 ---GCPCSDPRRPVR*PLGSRPRLRPDLRGPRP------GPAPERPRGLHPGSRFPGRDQ 298
G P +P R P G+ R P P P GP PE PR HPG R R
Sbjct: 115 LGGGAPGQNPLGGAR-PGGAPSRPYPHAPSPGPGNPQPFGPTPEAPRPPHPGLRGGLRGH 173
Query: 299 EAREGV*GPHRR*PGRVHP 355
GP PGR HP
Sbjct: 174 PPGRRPLGPRGSGPGRPHP 192