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[1][TOP]
>UniRef100_P48512 Transcription initiation factor IIB-1 n=2 Tax=Arabidopsis thaliana
RepID=TF2B1_ARATH
Length = 312
Score = 212 bits (539), Expect = 2e-53
Identities = 106/106 (100%), Positives = 106/106 (100%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKT 365
IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKT
Sbjct: 207 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKT 266
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 227
LKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP
Sbjct: 267 LKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 312
[2][TOP]
>UniRef100_B9T8A1 Transcription initiation factor iib, putative n=1 Tax=Ricinus
communis RepID=B9T8A1_RICCO
Length = 312
Score = 193 bits (491), Expect = 6e-48
Identities = 95/106 (89%), Positives = 100/106 (94%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKT 365
IHAGDFMRRFCSNL M+N A+KAAQEAVQKSEEFDIRRSPISIAA VIYII+QLSDDKK
Sbjct: 207 IHAGDFMRRFCSNLGMNNQAMKAAQEAVQKSEEFDIRRSPISIAAAVIYIISQLSDDKKL 266
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 227
L+DISHATGVAEGTIRNSYKDLYPH+SKI PSWYAKEEDLKNL SP
Sbjct: 267 LRDISHATGVAEGTIRNSYKDLYPHVSKIIPSWYAKEEDLKNLCSP 312
[3][TOP]
>UniRef100_P48513 Transcription initiation factor IIB n=1 Tax=Glycine max
RepID=TF2B_SOYBN
Length = 313
Score = 192 bits (487), Expect = 2e-47
Identities = 96/106 (90%), Positives = 99/106 (93%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKT 365
IHAGDFMRRFCSNL M+N AVKAAQEAVQKSEEFDIRRSPISIAA VIYIITQLSDDKK
Sbjct: 208 IHAGDFMRRFCSNLCMNNQAVKAAQEAVQKSEEFDIRRSPISIAAAVIYIITQLSDDKKP 267
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 227
LKDIS ATGVAEGTIRNSYKDLYPH+SKI P+WYAKEEDLKNL SP
Sbjct: 268 LKDISLATGVAEGTIRNSYKDLYPHVSKIIPNWYAKEEDLKNLCSP 313
[4][TOP]
>UniRef100_Q9SS44 Transcription initiation factor IIB-2 n=2 Tax=Arabidopsis thaliana
RepID=TF2B2_ARATH
Length = 312
Score = 188 bits (477), Expect = 2e-46
Identities = 93/106 (87%), Positives = 98/106 (92%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKT 365
IHAGDFMRRFCSNL M+N VKAAQE+VQKSEEFDIRRSPISIAA VIYIITQLSD+KK
Sbjct: 207 IHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEFDIRRSPISIAAAVIYIITQLSDEKKP 266
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 227
L+DIS ATGVAEGTIRNSYKDLYPHLSKI P+WYAKEEDLKNL SP
Sbjct: 267 LRDISVATGVAEGTIRNSYKDLYPHLSKIIPAWYAKEEDLKNLQSP 312
[5][TOP]
>UniRef100_A7PWI7 Chromosome chr8 scaffold_34, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PWI7_VITVI
Length = 312
Score = 187 bits (476), Expect = 3e-46
Identities = 92/106 (86%), Positives = 98/106 (92%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKT 365
IHAGDFMRRFCSNL M+N VKAAQEAVQKSEEFDIRRSP+SIAA VIYIITQLSD+KK
Sbjct: 207 IHAGDFMRRFCSNLGMTNQVVKAAQEAVQKSEEFDIRRSPVSIAAAVIYIITQLSDEKKL 266
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 227
L+DIS ATGVAEGTIRNSYKDLYPH+SKI PSWYAKEEDL+NL SP
Sbjct: 267 LRDISIATGVAEGTIRNSYKDLYPHISKIIPSWYAKEEDLRNLCSP 312
[6][TOP]
>UniRef100_A7QJY1 Chromosome undetermined scaffold_109, whole genome shotgun sequence
n=1 Tax=Vitis vinifera RepID=A7QJY1_VITVI
Length = 312
Score = 186 bits (473), Expect = 7e-46
Identities = 91/106 (85%), Positives = 98/106 (92%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKT 365
IHAGDFMRRFCSNL M+N VKAAQEAVQKSEEFDIRRSP+SIAA VIYIITQLSD+KK
Sbjct: 207 IHAGDFMRRFCSNLGMTNQVVKAAQEAVQKSEEFDIRRSPVSIAAAVIYIITQLSDEKKL 266
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 227
L+DIS ATGVAEGTIRNSYKDLYPH+S+I PSWYAKEEDL+NL SP
Sbjct: 267 LRDISIATGVAEGTIRNSYKDLYPHISRIIPSWYAKEEDLRNLCSP 312
[7][TOP]
>UniRef100_A5BBG2 Putative uncharacterized protein (Fragment) n=1 Tax=Vitis vinifera
RepID=A5BBG2_VITVI
Length = 312
Score = 186 bits (473), Expect = 7e-46
Identities = 91/106 (85%), Positives = 98/106 (92%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKT 365
IHAGDFMRRFCSNL M+N VKAAQEAVQKSEEFDIRRSP+SIAA VIYIITQLSD+KK
Sbjct: 207 IHAGDFMRRFCSNLGMTNQVVKAAQEAVQKSEEFDIRRSPVSIAAAVIYIITQLSDEKKL 266
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 227
L+DIS ATGVAEGTIRNSYKDLYPH+S+I PSWYAKEEDL+NL SP
Sbjct: 267 LRDISIATGVAEGTIRNSYKDLYPHISRIIPSWYAKEEDLRNLCSP 312
[8][TOP]
>UniRef100_B9H9K1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9H9K1_POPTR
Length = 312
Score = 186 bits (472), Expect = 9e-46
Identities = 92/106 (86%), Positives = 97/106 (91%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKT 365
IHAGDFMRRFCSNL MSNH VKAA EAV+ SE+FDIRRSPISIAA VIYIITQLSDDKK
Sbjct: 207 IHAGDFMRRFCSNLGMSNHTVKAATEAVKTSEQFDIRRSPISIAAAVIYIITQLSDDKKP 266
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 227
L+DIS ATGVAEGTIRNSYKDLYPH+SKI P+WYA EEDLKNLSSP
Sbjct: 267 LRDISLATGVAEGTIRNSYKDLYPHVSKIIPAWYANEEDLKNLSSP 312
[9][TOP]
>UniRef100_B9II90 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9II90_POPTR
Length = 312
Score = 185 bits (470), Expect = 2e-45
Identities = 92/106 (86%), Positives = 96/106 (90%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKT 365
IHAGDFMRRFCSNL MSNH VKAA EAV+ SE+FDIRRSPISIAA VIYIITQLSDDKK
Sbjct: 207 IHAGDFMRRFCSNLGMSNHTVKAATEAVKTSEQFDIRRSPISIAAAVIYIITQLSDDKKP 266
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 227
L+DIS ATGVAEGTIRNSYKDLYPH+SKI PSWYA EEDLKNL SP
Sbjct: 267 LRDISLATGVAEGTIRNSYKDLYPHVSKIIPSWYASEEDLKNLCSP 312
[10][TOP]
>UniRef100_A7PQV4 Chromosome chr6 scaffold_25, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PQV4_VITVI
Length = 314
Score = 175 bits (444), Expect = 2e-42
Identities = 88/106 (83%), Positives = 96/106 (90%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKT 365
IHAGDF+RRFCS+L M+N AVKAAQEAVQKSEE DIRRSPIS+AA VIY+ITQLSDDKK
Sbjct: 209 IHAGDFLRRFCSHLGMTNQAVKAAQEAVQKSEELDIRRSPISVAAAVIYMITQLSDDKKL 268
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 227
LKDIS ATGVAEGTIRNSYKDLYP+ S+I PS YAKEEDL+NL SP
Sbjct: 269 LKDISLATGVAEGTIRNSYKDLYPYASRIIPSSYAKEEDLRNLCSP 314
[11][TOP]
>UniRef100_B9RIF2 Transcription initiation factor iib, putative n=1 Tax=Ricinus
communis RepID=B9RIF2_RICCO
Length = 312
Score = 174 bits (440), Expect = 5e-42
Identities = 85/106 (80%), Positives = 96/106 (90%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKT 365
IHAGDF+RRFCS+L M+N AVKAAQEAV+KSEE DIRRSPISIAA +IY+ITQLS++KK
Sbjct: 207 IHAGDFLRRFCSHLGMNNQAVKAAQEAVKKSEELDIRRSPISIAAAIIYMITQLSEEKKL 266
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 227
LKDIS +TGVAEGTIRNSYKDLYP+ S+I PSWYAKEEDL NL SP
Sbjct: 267 LKDISTSTGVAEGTIRNSYKDLYPYASRIVPSWYAKEEDLINLCSP 312
[12][TOP]
>UniRef100_Q8W0W3 Transcription initiation factor IIB n=3 Tax=Oryza sativa
RepID=TF2B_ORYSJ
Length = 312
Score = 172 bits (437), Expect = 1e-41
Identities = 86/106 (81%), Positives = 95/106 (89%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKT 365
IHAGDF+RRFCS L M+N AVKAAQEAVQ+SEE DIRRSPISIAA VIY+ITQLSDDKK
Sbjct: 207 IHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEELDIRRSPISIAAAVIYMITQLSDDKKP 266
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 227
LKDIS ATGVAEGTIRNSYKDLYP+ S++ P+ YAKEEDLKNL +P
Sbjct: 267 LKDISLATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLKNLCTP 312
[13][TOP]
>UniRef100_C5X694 Putative uncharacterized protein Sb02g031020 n=1 Tax=Sorghum
bicolor RepID=C5X694_SORBI
Length = 312
Score = 170 bits (430), Expect = 7e-41
Identities = 84/106 (79%), Positives = 95/106 (89%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKT 365
IHAGDF+RRFCS L M+N AVKAAQEAVQ+SEE DIRRSPISIAA VIY+ITQLS+DKK
Sbjct: 207 IHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEELDIRRSPISIAAAVIYMITQLSEDKKP 266
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 227
LKDIS ATGVAEGTIRNSYKDLYP+ +++ P+ YAKEEDLKNL +P
Sbjct: 267 LKDISLATGVAEGTIRNSYKDLYPYAARLIPNTYAKEEDLKNLCTP 312
[14][TOP]
>UniRef100_B6THD9 Transcription initiation factor IIB n=1 Tax=Zea mays
RepID=B6THD9_MAIZE
Length = 312
Score = 167 bits (424), Expect = 3e-40
Identities = 83/106 (78%), Positives = 94/106 (88%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKT 365
IHAGDF+RRFCS L M+N AV AA+EAVQ+SEE DIRRSPISIAA VIY+ITQLS+DKK
Sbjct: 207 IHAGDFLRRFCSTLGMTNQAVNAAKEAVQRSEELDIRRSPISIAAAVIYMITQLSEDKKP 266
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 227
LKDIS ATGVAEGTIRNSYKDLYP+ S++ P+ YAKEEDLKNL +P
Sbjct: 267 LKDISLATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLKNLCTP 312
[15][TOP]
>UniRef100_B4FRH0 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FRH0_MAIZE
Length = 198
Score = 167 bits (424), Expect = 3e-40
Identities = 83/106 (78%), Positives = 94/106 (88%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKT 365
IHAGDF+RRFCS L M+N AV AA+EAVQ+SEE DIRRSPISIAA VIY+ITQLS+DKK
Sbjct: 93 IHAGDFLRRFCSTLGMTNQAVNAAKEAVQRSEELDIRRSPISIAAAVIYMITQLSEDKKP 152
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 227
LKDIS ATGVAEGTIRNSYKDLYP+ S++ P+ YAKEEDLKNL +P
Sbjct: 153 LKDISLATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLKNLCTP 198
[16][TOP]
>UniRef100_B9IEI3 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IEI3_POPTR
Length = 311
Score = 167 bits (423), Expect = 5e-40
Identities = 84/105 (80%), Positives = 91/105 (86%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKT 365
IHA D++RRFCSNL M+N AVKAA EAVQKSEE DIRRSPISIAA VIYII QLSDDKK
Sbjct: 207 IHAADYLRRFCSNLGMTNQAVKAAHEAVQKSEELDIRRSPISIAAAVIYIIIQLSDDKKP 266
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSS 230
LKDIS T VAEGTI+NSYKDL PHLS+I PSW+AKEED+KNL S
Sbjct: 267 LKDISVVTQVAEGTIKNSYKDLSPHLSQIIPSWFAKEEDIKNLHS 311
[17][TOP]
>UniRef100_B8LMH3 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LMH3_PICSI
Length = 313
Score = 166 bits (420), Expect = 1e-39
Identities = 79/106 (74%), Positives = 93/106 (87%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKT 365
IHAGDF+RRFCS+L M + AVKAA EAV+KSEE DIRRSPISIAA IY+I+QLS++KK
Sbjct: 208 IHAGDFLRRFCSHLGMGHQAVKAATEAVKKSEELDIRRSPISIAAAAIYMISQLSEEKKL 267
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 227
L+DIS ATGVAEGTIRNSYKDLYPH +++ P W+AKEEDLKNL +P
Sbjct: 268 LRDISRATGVAEGTIRNSYKDLYPHAARLIPDWFAKEEDLKNLCAP 313
[18][TOP]
>UniRef100_B4FHS1 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FHS1_MAIZE
Length = 312
Score = 164 bits (415), Expect = 4e-39
Identities = 81/106 (76%), Positives = 94/106 (88%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKT 365
IHAG+F+RRFCS L M+N AV+AAQ+AV+ SEE DIRRSPISIAA VIY+ITQLS+DKK
Sbjct: 207 IHAGNFLRRFCSTLGMNNQAVRAAQDAVKHSEELDIRRSPISIAAAVIYMITQLSEDKKP 266
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 227
LKDIS ATGVAEGTIRNSYKDLYP+ S++ P+ YAKEEDLKNL +P
Sbjct: 267 LKDISLATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLKNLCTP 312
[19][TOP]
>UniRef100_A9T0Q7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9T0Q7_PHYPA
Length = 312
Score = 145 bits (367), Expect = 1e-33
Identities = 71/107 (66%), Positives = 86/107 (80%), Gaps = 1/107 (0%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSD-DKK 368
IHAGDF+RRFCS+L M N+ V+AA E V+KSE DIR+SPIS+AA IY+I+QL++ DKK
Sbjct: 206 IHAGDFLRRFCSHLNMENNEVRAATETVKKSEMLDIRKSPISVAAAAIYMISQLNEKDKK 265
Query: 367 TLKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 227
LKDIS GVAE TIRNSYKDLYPH +K+ P W+ KE DLKNL +P
Sbjct: 266 ALKDISRVAGVAEVTIRNSYKDLYPHAAKLIPDWFLKEVDLKNLPAP 312
[20][TOP]
>UniRef100_B9IK69 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9IK69_POPTR
Length = 297
Score = 134 bits (337), Expect = 4e-30
Identities = 60/106 (56%), Positives = 82/106 (77%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKT 365
++ + +RRFCSNL M NHAVKA EAV+K ++ DIRR+P S+ A +IY ITQLSD+KK
Sbjct: 192 LNPSELVRRFCSNLGMKNHAVKAVHEAVEKIQDVDIRRNPKSVLAAIIYTITQLSDEKKP 251
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 227
L+DIS A VAEGTI+ S+KD+ PH+S++ P WYA+EED++ + P
Sbjct: 252 LRDISLAADVAEGTIKKSFKDISPHVSRLVPKWYAREEDIRRIRIP 297
[21][TOP]
>UniRef100_A9RXM3 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RXM3_PHYPA
Length = 312
Score = 116 bits (291), Expect = 9e-25
Identities = 58/104 (55%), Positives = 76/104 (73%), Gaps = 1/104 (0%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSD-DKK 368
IHAGDF RRFCS+L M + V+A E V+KSE I RSP+S+AA I++I+QL++ DKK
Sbjct: 206 IHAGDFSRRFCSHLDMEKNEVRAITETVKKSEMLVIGRSPLSVAAAAIFMISQLNEKDKK 265
Query: 367 TLKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNL 236
LKDIS GV E +IR Y++LYPH SK+ P W+ K+ DLK+L
Sbjct: 266 ELKDISRVAGVNEESIRFMYRELYPHASKLIPEWFLKDVDLKHL 309
[22][TOP]
>UniRef100_Q9M2L0 Putative uncharacterized protein F28O9.220 n=1 Tax=Arabidopsis
thaliana RepID=Q9M2L0_ARATH
Length = 360
Score = 101 bits (251), Expect = 4e-20
Identities = 49/107 (45%), Positives = 72/107 (67%), Gaps = 1/107 (0%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEF-DIRRSPISIAAVVIYIITQLSDDKK 368
I +F++RFCS + AV+AA EA + + + RR+P+S+AA ++Y+I +LS +K
Sbjct: 254 IETANFIKRFCSIFRLDKEAVEAALEAAESYDYMTNGRRAPVSVAAGIVYVIARLSYEKH 313
Query: 367 TLKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 227
LK + ATGVAE TI+ +Y DLYP+L I P+W+A DLKNL +P
Sbjct: 314 LLKGLIEATGVAENTIKGTYGDLYPNLPTIVPTWFANANDLKNLGAP 360
[23][TOP]
>UniRef100_Q6S7A3 Mutant TFIIB3 (Fragment) n=1 Tax=Arabidopsis thaliana
RepID=Q6S7A3_ARATH
Length = 336
Score = 100 bits (249), Expect = 7e-20
Identities = 47/101 (46%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSD-DKK 368
I+ GD +RRFCS L +S + A EAV+K+E FDIRR+P S+ A +I++I+ +S ++K
Sbjct: 218 INTGDLVRRFCSKLDISQREIMAIPEAVEKAENFDIRRNPKSVLAAIIFMISHISQTNRK 277
Query: 367 TLKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDL 245
+++I V E TI+NS KD+YP+ KI P+WYA E D+
Sbjct: 278 PIREIGIVAEVVENTIKNSVKDMYPYALKIIPNWYACESDI 318
[24][TOP]
>UniRef100_Q1PEE4 Transcription factor IIB family protein n=2 Tax=Arabidopsis
thaliana RepID=Q1PEE4_ARATH
Length = 362
Score = 100 bits (249), Expect = 7e-20
Identities = 49/109 (44%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFD---IRRSPISIAAVVIYIITQLSDD 374
I +F++RFCS + AV+AA EA + + RR+P+S+AA ++Y+I +LS +
Sbjct: 254 IETANFIKRFCSIFRLDKEAVEAALEAAESYDYMTNGCSRRAPVSVAAGIVYVIARLSYE 313
Query: 373 KKTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 227
K LK + ATGVAE TI+ +Y DLYP+L I P+W+A DLKNL +P
Sbjct: 314 KHLLKGLIEATGVAENTIKGTYGDLYPNLPTIVPTWFANANDLKNLGAP 362
[25][TOP]
>UniRef100_Q9LIA6 Transcription initiation factor IIB (TFIIB)-like protein n=1
Tax=Arabidopsis thaliana RepID=Q9LIA6_ARATH
Length = 336
Score = 99.0 bits (245), Expect = 2e-19
Identities = 46/101 (45%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSD-DKK 368
I+ G+ +RRFCS L +S + A EAV+K+E FDIRR+P S+ A +I++I+ +S ++K
Sbjct: 218 INTGELVRRFCSKLDISQREIMAIPEAVEKAENFDIRRNPKSVLAAIIFMISHISQTNRK 277
Query: 367 TLKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDL 245
+++I V E TI+NS KD+YP+ KI P+WYA E D+
Sbjct: 278 PIREIGIVAEVVENTIKNSVKDMYPYALKIIPNWYACESDI 318
[26][TOP]
>UniRef100_UPI000186D9D8 transcription initiation factor iib, putative n=1 Tax=Pediculus
humanus corporis RepID=UPI000186D9D8
Length = 313
Score = 93.2 bits (230), Expect = 1e-17
Identities = 48/93 (51%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL + N +AA +K+ E DI RSPIS+AA IY+ +Q SDDK
Sbjct: 206 ITTGDFMSRFCSNLGLPNMVQRAATHIARKAVELDIVPGRSPISVAAAAIYMASQASDDK 265
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
+ K+I GVA+ TIR SYK +YPH +K+ P
Sbjct: 266 RVQKEIGDIAGVADVTIRQSYKLMYPHATKLFP 298
[27][TOP]
>UniRef100_C5YUY2 Putative uncharacterized protein Sb09g027310 n=1 Tax=Sorghum
bicolor RepID=C5YUY2_SORBI
Length = 311
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/86 (51%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEE-FDIRRSPISIAAVVIYIITQLSDDKK 368
+ A D+MRRFCS L M N ++AAQEA ++ E D+RR+P SIAA + Y++ Q + K
Sbjct: 220 VRAADYMRRFCSRLGMGNQEMRAAQEAARRLENGLDVRRNPESIAAAISYMVVQRAGAGK 279
Query: 367 TLKDISHATGVAEGTIRNSYKDLYPH 290
T++D+S ATGVAE TI+ ++KDL PH
Sbjct: 280 TVRDVSMATGVAEATIKEAHKDLTPH 305
[28][TOP]
>UniRef100_UPI00003C0936 PREDICTED: similar to Transcription initiation factor IIB (General
transcription factor TFIIB) isoform 1 n=1 Tax=Apis
mellifera RepID=UPI00003C0936
Length = 315
Score = 91.7 bits (226), Expect = 3e-17
Identities = 47/93 (50%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL + N +AA +K+ E DI RSPIS+AA IY+ +Q S+DK
Sbjct: 208 ITTGDFMSRFCSNLGLPNMVQRAATHIARKAVEIDIVPGRSPISVAAAAIYMASQASEDK 267
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
++ K+I GVA+ TIR SYK +YPH K+ P
Sbjct: 268 RSQKEIGDIAGVADVTIRQSYKLMYPHAGKLFP 300
[29][TOP]
>UniRef100_UPI0001758201 PREDICTED: similar to Transcription initiation factor IIB (General
transcription factor TFIIB) n=1 Tax=Tribolium castaneum
RepID=UPI0001758201
Length = 313
Score = 90.9 bits (224), Expect = 5e-17
Identities = 47/93 (50%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL + N +AA +K+ E DI RSPIS+AA IY+ +Q S+DK
Sbjct: 206 ITTGDFMSRFCSNLGLPNMVQRAATHIARKAVELDIVPGRSPISVAAAAIYMASQASEDK 265
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
++ K+I GVA+ TIR SYK +YPH K+ P
Sbjct: 266 RSQKEIGDIAGVADVTIRQSYKLMYPHAVKLFP 298
[30][TOP]
>UniRef100_UPI00015B5246 PREDICTED: similar to Transcription initiation factor IIB (General
transcription factor TFIIB) n=1 Tax=Nasonia vitripennis
RepID=UPI00015B5246
Length = 315
Score = 89.4 bits (220), Expect = 2e-16
Identities = 45/93 (48%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL + N +AA +K+ + DI RSPIS+ A IY+ +Q SDDK
Sbjct: 208 ITTGDFMSRFCSNLGLPNMVQRAATHIARKAVDIDIVPGRSPISVTAAAIYMASQASDDK 267
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
K+ K+I GVA+ TIR SYK ++PH +++ P
Sbjct: 268 KSQKEIGDIAGVADVTIRQSYKLMFPHAARLFP 300
[31][TOP]
>UniRef100_Q5KQD1 Os05g0548200 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q5KQD1_ORYSJ
Length = 316
Score = 88.6 bits (218), Expect = 3e-16
Identities = 42/88 (47%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEE-FDIRRSPISIAAVVIYIITQLSDDKK 368
+ + D++RRFCS L + + V+AA +AV++ EE D+RR+P SIAA +IY++ Q + K
Sbjct: 224 VRSTDYLRRFCSRLGLGHQDVRAAGDAVRRLEERLDVRRNPESIAAAIIYMVVQRAGGSK 283
Query: 367 TLKDISHATGVAEGTIRNSYKDLYPHLS 284
+++D+S ATGVAEGTI ++K+L PH S
Sbjct: 284 SVRDVSTATGVAEGTITAAHKELAPHAS 311
[32][TOP]
>UniRef100_B9FLG0 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9FLG0_ORYSJ
Length = 287
Score = 88.6 bits (218), Expect = 3e-16
Identities = 42/88 (47%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEE-FDIRRSPISIAAVVIYIITQLSDDKK 368
+ + D++RRFCS L + + V+AA +AV++ EE D+RR+P SIAA +IY++ Q + K
Sbjct: 195 VRSTDYLRRFCSRLGLGHQDVRAAGDAVRRLEERLDVRRNPESIAAAIIYMVVQRAGGSK 254
Query: 367 TLKDISHATGVAEGTIRNSYKDLYPHLS 284
+++D+S ATGVAEGTI ++K+L PH S
Sbjct: 255 SVRDVSTATGVAEGTITAAHKELAPHAS 282
[33][TOP]
>UniRef100_A2Y747 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2Y747_ORYSI
Length = 319
Score = 88.6 bits (218), Expect = 3e-16
Identities = 42/88 (47%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEE-FDIRRSPISIAAVVIYIITQLSDDKK 368
+ + D++RRFCS L + + V+AA +AV++ EE D+RR+P SIAA +IY++ Q + K
Sbjct: 227 VRSTDYLRRFCSRLGLGHQDVRAAGDAVRRLEERLDVRRNPESIAAAIIYMVVQRAGGSK 286
Query: 367 TLKDISHATGVAEGTIRNSYKDLYPHLS 284
+++D+S ATGVAEGTI ++K+L PH S
Sbjct: 287 SVRDVSTATGVAEGTITAAHKELAPHAS 314
[34][TOP]
>UniRef100_Q7QG89 AGAP009558-PA n=1 Tax=Anopheles gambiae RepID=Q7QG89_ANOGA
Length = 316
Score = 86.7 bits (213), Expect = 1e-15
Identities = 45/93 (48%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I DFM RFC+NL + N +AA +K+ E DI RSPIS+AA IY+ +Q SD+K
Sbjct: 209 ITTADFMSRFCANLDLPNVVQRAATHIARKAVEMDIVPGRSPISVAAAAIYMASQASDNK 268
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
KT K+I GVA+ TIR SY+ +YPH +++ P
Sbjct: 269 KTHKEIGDIAGVADVTIRQSYRLMYPHAAELFP 301
[35][TOP]
>UniRef100_B0WI57 Transcription initiation factor TFIIB n=1 Tax=Culex
quinquefasciatus RepID=B0WI57_CULQU
Length = 316
Score = 86.7 bits (213), Expect = 1e-15
Identities = 45/93 (48%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I DFM RFC+NL + N +AA +K+ E DI RSPIS+AA IY+ +Q SD K
Sbjct: 209 ITTADFMSRFCANLDLPNTVQRAATHIARKAVEMDIVPGRSPISVAAAAIYMASQASDQK 268
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
KT K+I GVA+ TIR SY+ +YPH +++ P
Sbjct: 269 KTHKEIGDIAGVADVTIRQSYRLMYPHAAELFP 301
[36][TOP]
>UniRef100_B4NZP8 GE18945 n=1 Tax=Drosophila yakuba RepID=B4NZP8_DROYA
Length = 315
Score = 85.9 bits (211), Expect = 2e-15
Identities = 45/93 (48%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I DFM RFC+NL + N +AA +K+ E DI RSPIS+AA IY+ +Q S+ K
Sbjct: 208 ITTADFMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHK 267
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
++ KDI GVA+ TIR SYK +YPH +K+ P
Sbjct: 268 RSQKDIGDIAGVADVTIRQSYKLMYPHAAKLFP 300
[37][TOP]
>UniRef100_Q17AB9 Transcription initiation factor TFIIB n=1 Tax=Aedes aegypti
RepID=Q17AB9_AEDAE
Length = 318
Score = 84.7 bits (208), Expect = 4e-15
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I DFM RFC+NL + N +AA +K+ E DI RSPIS+AA IY+ +Q SD K
Sbjct: 209 ITTADFMSRFCANLDLPNTVQRAATHIARKAVEMDIVPGRSPISVAAAAIYMASQASDQK 268
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
KT K+I GVA+ TIR SY+ ++PH +++ P
Sbjct: 269 KTHKEIGDIAGVADVTIRQSYRLMHPHAAELFP 301
[38][TOP]
>UniRef100_Q17AB8 Transcription initiation factor TFIIB n=1 Tax=Aedes aegypti
RepID=Q17AB8_AEDAE
Length = 316
Score = 84.7 bits (208), Expect = 4e-15
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I DFM RFC+NL + N +AA +K+ E DI RSPIS+AA IY+ +Q SD K
Sbjct: 209 ITTADFMSRFCANLDLPNTVQRAATHIARKAVEMDIVPGRSPISVAAAAIYMASQASDQK 268
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
KT K+I GVA+ TIR SY+ ++PH +++ P
Sbjct: 269 KTHKEIGDIAGVADVTIRQSYRLMHPHAAELFP 301
[39][TOP]
>UniRef100_B4HWP7 GM18405 n=1 Tax=Drosophila sechellia RepID=B4HWP7_DROSE
Length = 315
Score = 84.7 bits (208), Expect = 4e-15
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I DFM RFC+NL + N +AA +K+ E DI RSPIS+AA IY+ +Q S+ K
Sbjct: 208 ITTADFMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHK 267
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWY 263
++ K+I GVA+ TIR SYK +YPH +K+ P +
Sbjct: 268 RSQKEIGDIAGVADVTIRQSYKLMYPHAAKLFPEHF 303
[40][TOP]
>UniRef100_B5DHX4 GA27746 n=1 Tax=Drosophila pseudoobscura pseudoobscura
RepID=B5DHX4_DROPS
Length = 314
Score = 84.3 bits (207), Expect = 5e-15
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I DFM RFC+NL + N +AA +K+ E DI RSPIS+AA IY+ +Q S+ K
Sbjct: 207 ITTADFMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHK 266
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
++ K+I GVA+ TIR SYK +YPH +K+ P
Sbjct: 267 RSQKEIGDIAGVADVTIRQSYKLMYPHAAKLFP 299
[41][TOP]
>UniRef100_B4KHS4 GI20422 n=2 Tax=Drosophila RepID=B4KHS4_DROMO
Length = 315
Score = 84.3 bits (207), Expect = 5e-15
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I DFM RFC+NL + N +AA +K+ E DI RSPIS+AA IY+ +Q S+ K
Sbjct: 208 ITTADFMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHK 267
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
++ K+I GVA+ TIR SYK +YPH +K+ P
Sbjct: 268 RSQKEIGDIAGVADVTIRQSYKLMYPHAAKLFP 300
[42][TOP]
>UniRef100_B4JPZ0 GH13607 n=1 Tax=Drosophila grimshawi RepID=B4JPZ0_DROGR
Length = 315
Score = 84.3 bits (207), Expect = 5e-15
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I DFM RFC+NL + N +AA +K+ E DI RSPIS+AA IY+ +Q S+ K
Sbjct: 208 ITTADFMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHK 267
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
++ K+I GVA+ TIR SYK +YPH +K+ P
Sbjct: 268 RSQKEIGDIAGVADVTIRQSYKLMYPHAAKLFP 300
[43][TOP]
>UniRef100_Q9NHP7 Transcription initiation factor IIB n=1 Tax=Drosophila virilis
RepID=TF2B_DROVI
Length = 293
Score = 84.3 bits (207), Expect = 5e-15
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I DFM RFC+NL + N +AA +K+ E DI RSPIS+AA IY+ +Q S+ K
Sbjct: 186 ITTADFMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHK 245
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
++ K+I GVA+ TIR SYK +YPH +K+ P
Sbjct: 246 RSQKEIGDIAGVADVTIRQSYKLMYPHAAKLFP 278
[44][TOP]
>UniRef100_P29052 Transcription initiation factor IIB n=6 Tax=Sophophora
RepID=TF2B_DROME
Length = 315
Score = 84.3 bits (207), Expect = 5e-15
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I DFM RFC+NL + N +AA +K+ E DI RSPIS+AA IY+ +Q S+ K
Sbjct: 208 ITTADFMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHK 267
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
++ K+I GVA+ TIR SYK +YPH +K+ P
Sbjct: 268 RSQKEIGDIAGVADVTIRQSYKLMYPHAAKLFP 300
[45][TOP]
>UniRef100_C3ZCP1 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3ZCP1_BRAFL
Length = 319
Score = 83.2 bits (204), Expect = 1e-14
Identities = 42/94 (44%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL + + +AA +K+ E D+ RSPIS+AA IY+ +Q S++K
Sbjct: 212 ITTGDFMSRFCSNLNLPSQVQRAATHIARKAVELDLVPGRSPISVAAAAIYMASQASEEK 271
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
+T K+I GVA+ TIR SY+ +YP ++ P+
Sbjct: 272 RTQKEIGDIAGVADVTIRQSYRLIYPRAHELFPA 305
[46][TOP]
>UniRef100_UPI0000E479AC PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus
purpuratus RepID=UPI0000E479AC
Length = 321
Score = 82.8 bits (203), Expect = 1e-14
Identities = 43/108 (39%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL++ +AA +K++E D+ RSPIS+ A IY+ +Q S++K
Sbjct: 214 ITTGDFMSRFCSNLSLPPKVQRAATHIARKADELDLVAGRSPISVTAAAIYMASQASEEK 273
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 227
++ K+I GVA+ TIR SYK +YP + P + +++L P
Sbjct: 274 RSQKEIGEIAGVADVTIRQSYKLIYPKSHDLFPQDFQFATKIEDLPPP 321
[47][TOP]
>UniRef100_UPI00017B0FC9 UPI00017B0FC9 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B0FC9
Length = 318
Score = 81.3 bits (199), Expect = 4e-14
Identities = 43/93 (46%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL + AA +K+ E D+ RSPIS+AA IY+ +Q S +K
Sbjct: 211 ITTGDFMSRFCSNLGLPKQVQMAATFIARKAVELDLVPGRSPISVAAAAIYMASQASAEK 270
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
KT K+I GVA+ TIR SY+ +YP +++ P
Sbjct: 271 KTQKEIGDIAGVADVTIRQSYRLIYPRAAELFP 303
[48][TOP]
>UniRef100_UPI00016E2A21 UPI00016E2A21 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E2A21
Length = 318
Score = 81.3 bits (199), Expect = 4e-14
Identities = 43/93 (46%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL + AA +K+ E D+ RSPIS+AA IY+ +Q S +K
Sbjct: 211 ITTGDFMSRFCSNLGLPKQVQMAATFIARKAVELDLVPGRSPISVAAAAIYMASQASAEK 270
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
KT K+I GVA+ TIR SY+ +YP +++ P
Sbjct: 271 KTQKEIGDIAGVADVTIRQSYRLIYPRAAELFP 303
[49][TOP]
>UniRef100_Q6B512 General transcription factor II B n=1 Tax=Oreochromis mossambicus
RepID=Q6B512_OREMO
Length = 318
Score = 81.3 bits (199), Expect = 4e-14
Identities = 43/93 (46%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL + AA +K+ E D+ RSPIS+AA IY+ +Q S +K
Sbjct: 211 ITTGDFMSRFCSNLGLPKQVQMAATFIARKAVELDLVPGRSPISVAAAAIYMASQASAEK 270
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
KT K+I GVA+ TIR SY+ +YP +++ P
Sbjct: 271 KTQKEIGDIAGVADVTIRQSYRLIYPRAAELFP 303
[50][TOP]
>UniRef100_Q4SSL3 Chromosome 15 SCAF14367, whole genome shotgun sequence. (Fragment)
n=1 Tax=Tetraodon nigroviridis RepID=Q4SSL3_TETNG
Length = 344
Score = 81.3 bits (199), Expect = 4e-14
Identities = 43/93 (46%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL + AA +K+ E D+ RSPIS+AA IY+ +Q S +K
Sbjct: 237 ITTGDFMSRFCSNLGLPKQVQMAATFIARKAVELDLVPGRSPISVAAAAIYMASQASAEK 296
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
KT K+I GVA+ TIR SY+ +YP +++ P
Sbjct: 297 KTQKEIGDIAGVADVTIRQSYRLIYPRAAELFP 329
[51][TOP]
>UniRef100_Q3UZJ3 Putative uncharacterized protein n=1 Tax=Mus musculus
RepID=Q3UZJ3_MOUSE
Length = 316
Score = 81.3 bits (199), Expect = 4e-14
Identities = 43/94 (45%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL + AA +K+ E D+ RSPIS+AA IY+ +Q S +K
Sbjct: 209 ITTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEK 268
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
+T K+I GVA+ TIR SY+ +YP + PS
Sbjct: 269 RTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPS 302
[52][TOP]
>UniRef100_P62915 Transcription initiation factor IIB n=3 Tax=Murinae
RepID=TF2B_MOUSE
Length = 316
Score = 81.3 bits (199), Expect = 4e-14
Identities = 43/94 (45%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL + AA +K+ E D+ RSPIS+AA IY+ +Q S +K
Sbjct: 209 ITTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEK 268
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
+T K+I GVA+ TIR SY+ +YP + PS
Sbjct: 269 RTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPS 302
[53][TOP]
>UniRef100_UPI000194CD4A PREDICTED: hypothetical protein n=1 Tax=Taeniopygia guttata
RepID=UPI000194CD4A
Length = 316
Score = 80.9 bits (198), Expect = 6e-14
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL + AA +K+ E D+ RSPIS+AA IY+ +Q S +K
Sbjct: 209 ITTGDFMSRFCSNLGLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASSEK 268
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
+T K+I GVA+ TIR SY+ +YP + P+
Sbjct: 269 RTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPA 302
[54][TOP]
>UniRef100_Q7SX98 General transcription factor IIB n=1 Tax=Danio rerio
RepID=Q7SX98_DANRE
Length = 316
Score = 80.9 bits (198), Expect = 6e-14
Identities = 43/93 (46%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL + AA +K+ E D+ RSPIS+AA IY+ +Q S +K
Sbjct: 209 ITTGDFMSRFCSNLGLPKQVQMAATYIARKAVELDLVPGRSPISVAAAAIYMASQASAEK 268
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
KT K+I GVA+ TIR SY+ +YP + + P
Sbjct: 269 KTQKEIGDIAGVADVTIRQSYRLIYPRAADLFP 301
[55][TOP]
>UniRef100_Q63ZH4 LOC494830 protein n=1 Tax=Xenopus laevis RepID=Q63ZH4_XENLA
Length = 316
Score = 80.9 bits (198), Expect = 6e-14
Identities = 42/94 (44%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL ++ AA +K+ E D+ RSPIS+AA IY+ +Q S +K
Sbjct: 209 ITTGDFMSRFCSNLGLTKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEK 268
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
+T K+I GVA+ TIR SY+ +YP + P+
Sbjct: 269 RTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPA 302
[56][TOP]
>UniRef100_Q28G23 General transcription factor IIBgeneral transcription factor IIB
n=2 Tax=Xenopus (Silurana) tropicalis RepID=Q28G23_XENTR
Length = 316
Score = 80.9 bits (198), Expect = 6e-14
Identities = 42/94 (44%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL ++ AA +K+ E D+ RSPIS+AA IY+ +Q S +K
Sbjct: 209 ITTGDFMSRFCSNLGLTKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEK 268
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
+T K+I GVA+ TIR SY+ +YP + P+
Sbjct: 269 RTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPA 302
[57][TOP]
>UniRef100_B5XD83 Transcription initiation factor IIB n=1 Tax=Salmo salar
RepID=B5XD83_SALSA
Length = 318
Score = 80.9 bits (198), Expect = 6e-14
Identities = 43/93 (46%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL + AA +K+ E D+ RSPIS+AA IY+ +Q S +K
Sbjct: 211 ITTGDFMSRFCSNLGLPKQVQMAATYIARKAVELDLVPGRSPISVAAAAIYMASQASAEK 270
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
KT K+I GVA+ TIR SY+ +YP + + P
Sbjct: 271 KTQKEIGDIAGVADVTIRQSYRLIYPRAADLFP 303
[58][TOP]
>UniRef100_A2BIH7 General transcription factor IIB n=1 Tax=Danio rerio
RepID=A2BIH7_DANRE
Length = 316
Score = 80.9 bits (198), Expect = 6e-14
Identities = 43/93 (46%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL + AA +K+ E D+ RSPIS+AA IY+ +Q S +K
Sbjct: 209 ITTGDFMSRFCSNLGLPKQVQMAATYIARKAVELDLVPGRSPISVAAAAIYMASQASAEK 268
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
KT K+I GVA+ TIR SY+ +YP + + P
Sbjct: 269 KTQKEIGDIAGVADVTIRQSYRLIYPRAADLFP 301
[59][TOP]
>UniRef100_P29054 Transcription initiation factor IIB n=1 Tax=Xenopus laevis
RepID=TF2B_XENLA
Length = 316
Score = 80.9 bits (198), Expect = 6e-14
Identities = 42/94 (44%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL ++ AA +K+ E D+ RSPIS+AA IY+ +Q S +K
Sbjct: 209 ITTGDFMSRFCSNLGLTKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEK 268
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
+T K+I GVA+ TIR SY+ +YP + P+
Sbjct: 269 RTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPA 302
[60][TOP]
>UniRef100_UPI000155D43D PREDICTED: similar to general transcription factor IIB, partial n=1
Tax=Ornithorhynchus anatinus RepID=UPI000155D43D
Length = 544
Score = 80.5 bits (197), Expect = 7e-14
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL + AA +K+ E D+ RSPIS+AA IY+ +Q S +K
Sbjct: 437 ITTGDFMSRFCSNLGLPKQVQMAATHIARKAVEIDLVPGRSPISVAAAAIYMASQASTEK 496
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
+T K+I GVA+ TIR SY+ +YP + P+
Sbjct: 497 RTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPA 530
Score = 62.0 bits (149), Expect = 3e-08
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL + AA +K+ E D+ RSPIS+AA IY+ +Q S +K
Sbjct: 343 ITTGDFMSRFCSNLGLPKQVQMAATHIARKAVEIDLVPGRSPISVAAAAIYMASQASTEK 402
Query: 370 KTLKDISHATGVAEGTIRNSYK 305
+T K+I + +++ I +K
Sbjct: 403 RTQKEICAVSRISKKEIGRCFK 424
[61][TOP]
>UniRef100_UPI0000F2BACE PREDICTED: similar to alpha initiation factor n=1 Tax=Monodelphis
domestica RepID=UPI0000F2BACE
Length = 316
Score = 80.1 bits (196), Expect = 1e-13
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL + AA +K+ E D+ RSPIS+AA IY+ +Q S +K
Sbjct: 209 ITTGDFMSRFCSNLGLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEK 268
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
+T K+I GVA+ TIR SY+ +YP + P+
Sbjct: 269 RTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPA 302
[62][TOP]
>UniRef100_UPI0000EBC715 PREDICTED: similar to Transcription initiation factor IIB (General
transcription factor TFIIB) (S300-II) n=1 Tax=Bos taurus
RepID=UPI0000EBC715
Length = 149
Score = 80.1 bits (196), Expect = 1e-13
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL + AA +K+ E D+ RSPIS+AA IY+ +Q S +K
Sbjct: 42 ITTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEK 101
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
+T K+I GVA+ TIR SY+ +YP + P+
Sbjct: 102 RTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPT 135
[63][TOP]
>UniRef100_UPI0000E80A74 PREDICTED: similar to IIB protein n=1 Tax=Gallus gallus
RepID=UPI0000E80A74
Length = 468
Score = 80.1 bits (196), Expect = 1e-13
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL + AA +K+ E D+ RSPIS+AA IY+ +Q S +K
Sbjct: 361 ITTGDFMSRFCSNLGLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEK 420
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
+T K+I GVA+ TIR SY+ +YP + P+
Sbjct: 421 RTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPA 454
[64][TOP]
>UniRef100_Q00403 Transcription initiation factor IIB n=5 Tax=Eutheria
RepID=TF2B_HUMAN
Length = 316
Score = 80.1 bits (196), Expect = 1e-13
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL + AA +K+ E D+ RSPIS+AA IY+ +Q S +K
Sbjct: 209 ITTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEK 268
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
+T K+I GVA+ TIR SY+ +YP + P+
Sbjct: 269 RTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPT 302
[65][TOP]
>UniRef100_UPI0000D99A17 PREDICTED: general transcription factor IIB n=1 Tax=Macaca mulatta
RepID=UPI0000D99A17
Length = 373
Score = 80.1 bits (196), Expect = 1e-13
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL + AA +K+ E D+ RSPIS+AA IY+ +Q S +K
Sbjct: 266 ITTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEK 325
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
+T K+I GVA+ TIR SY+ +YP + P+
Sbjct: 326 RTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPT 359
[66][TOP]
>UniRef100_UPI0000ECB339 Transcription initiation factor IIB (General transcription factor
TFIIB) (S300-II). n=1 Tax=Gallus gallus
RepID=UPI0000ECB339
Length = 306
Score = 80.1 bits (196), Expect = 1e-13
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL + AA +K+ E D+ RSPIS+AA IY+ +Q S +K
Sbjct: 199 ITTGDFMSRFCSNLGLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEK 258
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
+T K+I GVA+ TIR SY+ +YP + P+
Sbjct: 259 RTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPA 292
[67][TOP]
>UniRef100_B3RPB4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
RepID=B3RPB4_TRIAD
Length = 340
Score = 80.1 bits (196), Expect = 1e-13
Identities = 43/107 (40%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDK 371
I DFM RFCSNL + N+ KAA ++ E D+ RSP+S+ A IY+ +Q SD K
Sbjct: 233 ISTQDFMSRFCSNLNLPNYVQKAASHIAHRAIELDLAPGRSPVSVTAAAIYLASQASDTK 292
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSS 230
K+ K+I GVA+ TIR SY+ L P + P+ + + + L S
Sbjct: 293 KSQKEIGDVAGVADVTIRQSYRLLLPRSKDLFPADFVFKTPIDQLPS 339
[68][TOP]
>UniRef100_A7SH79 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SH79_NEMVE
Length = 310
Score = 79.7 bits (195), Expect = 1e-13
Identities = 44/107 (41%), Positives = 66/107 (61%), Gaps = 2/107 (1%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I +GDFM RFCSNL + KAA +++ E D+ RSPISIAA IY+ +Q S++K
Sbjct: 203 ITSGDFMSRFCSNLTLPLSVQKAATYIARRAVELDLVAGRSPISIAAAAIYMASQASEEK 262
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSS 230
++ K+I GVA+ TIR SY+ L+P ++ P+ + ++ L S
Sbjct: 263 RSQKEIGDIAGVADVTIRQSYRLLFPKARELFPADFKFAVPIERLPS 309
[69][TOP]
>UniRef100_UPI0000521774 PREDICTED: similar to Transcription initiation factor IIB (General
transcription factor TFIIB) (S300-II) n=1 Tax=Ciona
intestinalis RepID=UPI0000521774
Length = 314
Score = 78.6 bits (192), Expect = 3e-13
Identities = 42/93 (45%), Positives = 59/93 (63%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I +GDFM RFCSNL + + + A +K+ E D+ RSPIS+AA IY+ +Q S +K
Sbjct: 207 ITSGDFMSRFCSNLNLPPYVQRGATYIARKAVEKDLVAGRSPISVAAAAIYMASQASKEK 266
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
++ K+IS GVAE TIR SYK ++P + P
Sbjct: 267 RSQKEISEIAGVAEVTIRQSYKLMHPRAKDLFP 299
[70][TOP]
>UniRef100_A8QEV5 Transcription initiation factor IIB, putative n=1 Tax=Brugia malayi
RepID=A8QEV5_BRUMA
Length = 309
Score = 78.6 bits (192), Expect = 3e-13
Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I + DFM RFC NL + + AA +K+ E D+ RSPISIAA IY+ +Q S +K
Sbjct: 202 ITSADFMSRFCGNLGLPHSIQAAATRIAKKAVELDLVAGRSPISIAAAAIYMASQASSNK 261
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
KT K+I G AE T++ +YK LYP ++ P
Sbjct: 262 KTAKEIGEIAGAAEVTVKQTYKLLYPRAGELFP 294
[71][TOP]
>UniRef100_UPI00017936E7 PREDICTED: similar to Transcription initiation factor IIB (General
transcription factor TFIIB) n=1 Tax=Acyrthosiphon pisum
RepID=UPI00017936E7
Length = 310
Score = 78.2 bits (191), Expect = 4e-13
Identities = 41/93 (44%), Positives = 59/93 (63%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFC NL + N +AA +K+ E+DI RSPIS+AA I++ +Q SD+K
Sbjct: 203 ITTGDFMSRFCCNLGLPNMVQRAATHIAKKAVEYDIVPGRSPISVAAAAIFMASQASDEK 262
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
++ K+I GVAE TI+ SYK + + + + P
Sbjct: 263 RSQKEIGDIAGVAEVTIKQSYKLILANATLLFP 295
[72][TOP]
>UniRef100_Q2KIN8 Transcription initiation factor IIB n=1 Tax=Bos taurus
RepID=TF2B_BOVIN
Length = 316
Score = 78.2 bits (191), Expect = 4e-13
Identities = 41/94 (43%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL + AA +K+ E D+ RSPIS+A IY+ +Q S +K
Sbjct: 209 ITTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAEAAIYMASQASAEK 268
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
+T K+I GVA+ TIR SY+ +YP + P+
Sbjct: 269 RTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPT 302
[73][TOP]
>UniRef100_B8B6F7 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8B6F7_ORYSI
Length = 341
Score = 77.4 bits (189), Expect = 6e-13
Identities = 36/86 (41%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDD-KK 368
+ AGD++ R+ S + MS AA+ A + + D+RR+P SIAA ++Y+ Q S +K
Sbjct: 250 VRAGDYLHRYGSAVGMSGQEASAARRAAGRLDSLDVRRNPQSIAAAIVYMAAQGSSGVRK 309
Query: 367 TLKDISHATGVAEGTIRNSYKDLYPH 290
+++++S ATGV+E TI+++YKDL PH
Sbjct: 310 SVREVSAATGVSESTIKDAYKDLCPH 335
[74][TOP]
>UniRef100_Q54FD6 Transcription initiation factor IIB n=1 Tax=Dictyostelium
discoideum RepID=TF2B_DICDI
Length = 325
Score = 77.4 bits (189), Expect = 6e-13
Identities = 40/94 (42%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I + DF RFCS L + N K A+ + + + I +SPIS+ A IY+++QLS +K
Sbjct: 218 ISSEDFTSRFCSTLKLPNDVKKGAEHVSKMAMDMGIVAGKSPISVTAASIYMVSQLSPEK 277
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
+T K I+ +GV+E TIRN+YKDLY ++ PS
Sbjct: 278 RTQKQIADVSGVSEVTIRNAYKDLYAKRDQLIPS 311
[75][TOP]
>UniRef100_Q3UNY0 Putative uncharacterized protein n=1 Tax=Mus musculus
RepID=Q3UNY0_MOUSE
Length = 316
Score = 77.0 bits (188), Expect = 8e-13
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GD M RFCSNL + AA +K+ E D+ RSPIS+AA IY+ +Q S +K
Sbjct: 209 ITTGDLMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEK 268
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
+T K+I GVA+ TIR SY+ YP + PS
Sbjct: 269 RTQKEIGDIAGVADVTIRQSYRLNYPRAPDLFPS 302
[76][TOP]
>UniRef100_Q7QG90 AGAP009559-PA n=1 Tax=Anopheles gambiae RepID=Q7QG90_ANOGA
Length = 315
Score = 74.7 bits (182), Expect = 4e-12
Identities = 41/93 (44%), Positives = 59/93 (63%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I + DFM+RFCS L + + KAA QK+ E D+ RSPIS+AA IY+ +Q+S
Sbjct: 204 ITSEDFMQRFCSKLFLPHEVQKAATHIAQKAFEADLVPDRSPISVAAAAIYMASQVSATA 263
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
+LK ++ GVAE TI+ SYK ++PH ++ P
Sbjct: 264 MSLKAVAAIAGVAELTIKQSYKLMHPHAWELFP 296
[77][TOP]
>UniRef100_A8X282 C. briggsae CBR-TTB-1 protein n=1 Tax=Caenorhabditis briggsae AF16
RepID=A8X282_CAEBR
Length = 306
Score = 74.3 bits (181), Expect = 5e-12
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I + DFM RFC NL + N AA +++ + D+ R+PISIAA IY+ +Q S +K
Sbjct: 199 ITSADFMSRFCGNLYLPNSIQAAATRIAKRAVDMDLVAGRTPISIAAAAIYMASQASGEK 258
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
++ K+I G AE T+R +YK LYP +++ P
Sbjct: 259 RSAKEIGDVAGAAEITVRQTYKLLYPKAAELFP 291
[78][TOP]
>UniRef100_UPI000192557A PREDICTED: similar to general transcription factor IIB n=1
Tax=Hydra magnipapillata RepID=UPI000192557A
Length = 275
Score = 73.9 bits (180), Expect = 7e-12
Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I + DFM RFCSNL++ +AA +++ E D+ RSP+S+AA IY+ +Q S DK
Sbjct: 168 ITSEDFMSRFCSNLSLPASVQRAATYIARRAMELDLVPGRSPVSVAAAAIYLASQASLDK 227
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
K+ KDI GVA+ TIR SY+ L + + P
Sbjct: 228 KSQKDIGDIAGVADVTIRQSYRSLVVRAADLFP 260
[79][TOP]
>UniRef100_C5YUY1 Putative uncharacterized protein Sb09g027300 n=1 Tax=Sorghum
bicolor RepID=C5YUY1_SORBI
Length = 286
Score = 73.6 bits (179), Expect = 9e-12
Identities = 36/87 (41%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQK-SEEFDIRRSPISIAAVVIYI-ITQLSDDK 371
+ A D++ RF S L M V+A QEA ++ ++ D+RR+P S AA +IY+ + + +
Sbjct: 194 VRAADYVARFGSQLGMEAGEVRAVQEAARRMQDQLDVRRNPDSTAAAIIYMAMERRAGAG 253
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPH 290
++++D+S ATGVAE TI+ +Y++LYPH
Sbjct: 254 RSIRDVSAATGVAENTIKQAYRELYPH 280
[80][TOP]
>UniRef100_A3AF21 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=A3AF21_ORYSJ
Length = 309
Score = 72.4 bits (176), Expect = 2e-11
Identities = 37/86 (43%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEE-FDIRRSPISIAAVVIYIITQLSDDKK 368
+ A D+M RF S L M V+ AQ A Q E+ D+RR+P SIAA +IY++ Q + +
Sbjct: 217 VRAADYMSRFGSRLGMGKPEVREAQRAAQTLEDKLDVRRNPESIAAAIIYMVVQRAGAQT 276
Query: 367 TLKDISHATGVAEGTIRNSYKDLYPH 290
+ +D+S A+GVAE TI+ + K+L H
Sbjct: 277 SARDVSKASGVAEATIKEACKELSQH 302
[81][TOP]
>UniRef100_Q8H7W1 Putative transcription initiation factor IIB n=2 Tax=Oryza sativa
RepID=Q8H7W1_ORYSJ
Length = 308
Score = 72.4 bits (176), Expect = 2e-11
Identities = 37/86 (43%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEE-FDIRRSPISIAAVVIYIITQLSDDKK 368
+ A D+M RF S L M V+ AQ A Q E+ D+RR+P SIAA +IY++ Q + +
Sbjct: 216 VRAADYMSRFGSRLGMGKPEVREAQRAAQTLEDKLDVRRNPESIAAAIIYMVVQRAGAQT 275
Query: 367 TLKDISHATGVAEGTIRNSYKDLYPH 290
+ +D+S A+GVAE TI+ + K+L H
Sbjct: 276 SARDVSKASGVAEATIKEACKELSQH 301
[82][TOP]
>UniRef100_O16991 Transcription initiation factor IIB n=1 Tax=Caenorhabditis elegans
RepID=TF2B_CAEEL
Length = 306
Score = 72.0 bits (175), Expect = 3e-11
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I + DFM RFC NL++ N AA + + + D+ R+PISIAA IY+ +Q S +K
Sbjct: 199 ITSADFMSRFCGNLSLPNSIQAAATRIAKCAVDMDLVAGRTPISIAAAAIYMASQASAEK 258
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
++ K+I G AE T+R +YK LYP ++ P
Sbjct: 259 RSAKEIGDVAGAAEITVRQTYKLLYPKALELFP 291
[83][TOP]
>UniRef100_C4J4Z3 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C4J4Z3_MAIZE
Length = 308
Score = 70.5 bits (171), Expect = 8e-11
Identities = 34/93 (36%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEE-FDIRRSPISIAAVVIYI-ITQLSDDK 371
+ A D++ RF S L + V+A QEA ++ ++ D+RR+P S AA ++++ + + +
Sbjct: 216 VRAADYVERFGSLLGIGEGEVRAVQEAARRMQDHLDVRRNPDSTAAAIVFMAMERRAGAG 275
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
+++D+S ATGVAE TI+ +Y++LYPH + P
Sbjct: 276 SSIRDVSAATGVAENTIKQAYRELYPHADLLFP 308
[84][TOP]
>UniRef100_C4YA24 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4YA24_CLAL4
Length = 349
Score = 69.7 bits (169), Expect = 1e-10
Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Frame = -3
Query: 538 AGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKT 365
A D +RRFCS+L +SN AA+ ++ +E I RSPI+IAA VIY+ + L + T
Sbjct: 239 AEDLIRRFCSHLGLSNEVTNAAEYIARRCKESGILAGRSPITIAATVIYMTSLLFGAEVT 298
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSK-IAPSW 266
I++ TGV++GTI+ S K +Y K I PSW
Sbjct: 299 PSKIANKTGVSDGTIKTSLKVMYEDREKLIDPSW 332
[85][TOP]
>UniRef100_Q6Z470 Putative Transcription initiation factor IIB n=1 Tax=Oryza sativa
Japonica Group RepID=Q6Z470_ORYSJ
Length = 354
Score = 68.2 bits (165), Expect = 4e-10
Identities = 36/90 (40%), Positives = 58/90 (64%), Gaps = 5/90 (5%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEE-FDIRRSPISIAAVVIYIITQLSDD-- 374
+ A +++ R+ S + MS V AAQ A + +E D+RR+P SIAA +IY+ Q +
Sbjct: 259 VRASNYLLRYGSAVGMSGQEVSAAQRAASRLDESLDVRRNPQSIAAAIIYMAVQRAGGGG 318
Query: 373 --KKTLKDISHATGVAEGTIRNSYKDLYPH 290
K+++++S ATGV+E TI+++YKDL H
Sbjct: 319 GRSKSVREVSAATGVSESTIKDAYKDLCQH 348
[86][TOP]
>UniRef100_A3BK43 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=A3BK43_ORYSJ
Length = 300
Score = 68.2 bits (165), Expect = 4e-10
Identities = 36/90 (40%), Positives = 58/90 (64%), Gaps = 5/90 (5%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEE-FDIRRSPISIAAVVIYIITQLSDD-- 374
+ A +++ R+ S + MS V AAQ A + +E D+RR+P SIAA +IY+ Q +
Sbjct: 205 VRASNYLLRYGSAVGMSGQEVSAAQRAASRLDESLDVRRNPQSIAAAIIYMAVQRAGGGG 264
Query: 373 --KKTLKDISHATGVAEGTIRNSYKDLYPH 290
K+++++S ATGV+E TI+++YKDL H
Sbjct: 265 GRSKSVREVSAATGVSESTIKDAYKDLCQH 294
[87][TOP]
>UniRef100_A2YLM6 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2YLM6_ORYSI
Length = 354
Score = 68.2 bits (165), Expect = 4e-10
Identities = 36/90 (40%), Positives = 58/90 (64%), Gaps = 5/90 (5%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEE-FDIRRSPISIAAVVIYIITQLSDD-- 374
+ A +++ R+ S + MS V AAQ A + +E D+RR+P SIAA +IY+ Q +
Sbjct: 259 VRASNYLLRYGSAVGMSGQEVSAAQRAASRLDESLDVRRNPQSIAAAIIYMAVQRAGGGG 318
Query: 373 --KKTLKDISHATGVAEGTIRNSYKDLYPH 290
K+++++S ATGV+E TI+++YKDL H
Sbjct: 319 GRSKSVREVSAATGVSESTIKDAYKDLCQH 348
[88][TOP]
>UniRef100_B6JY64 Transcription factor TFIIB n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6JY64_SCHJY
Length = 339
Score = 67.8 bits (164), Expect = 5e-10
Identities = 43/104 (41%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Frame = -3
Query: 538 AGDFMRRFCSNLAMSNHAVKAAQEAVQKS--EEFDIRRSPISIAAVVIYIITQLSDDKKT 365
A D M RFC+ L + AA E +++ E RSPISIAA IY+I+ L KT
Sbjct: 232 AEDLMVRFCNRLQLPTFVQLAAAELARRAGQEGTLAGRSPISIAASGIYMISSLMGYPKT 291
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIA-PSWYAKEEDLKNL 236
K+IS TGV++ TIR +YK L+ +K+ P W AK+ + +L
Sbjct: 292 PKEISEVTGVSDSTIRIAYKLLHAERNKLVDPKWVAKDRTMDSL 335
[89][TOP]
>UniRef100_Q7X9L8 Transcription factor TFIIB (Fragment) n=1 Tax=Triticum aestivum
RepID=Q7X9L8_WHEAT
Length = 111
Score = 61.6 bits (148), Expect(2) = 9e-10
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = -3
Query: 484 VKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKTLK 359
+K + AVQ+SEE DIRRSPISIAA VIY+ITQLS+DKK LK
Sbjct: 5 LKQLRXAVQRSEELDIRRSPISIAAAVIYMITQLSEDKKPLK 46
Score = 25.4 bits (54), Expect(2) = 9e-10
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -2
Query: 356 YIACDRSSRRDNKEFIQRLVSTSVKDSTKLVCKGRGSEKPVKSL 225
Y+ S RR ++EFIQ V + +LV +G E+PV ++
Sbjct: 48 YLLGHWSGRRHHQEFIQGPVPVRGEAHPELVRQGGRPEEPVHTI 91
[90][TOP]
>UniRef100_A7E760 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum
1980 UF-70 RepID=A7E760_SCLS1
Length = 350
Score = 65.1 bits (157), Expect = 3e-09
Identities = 42/98 (42%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Frame = -3
Query: 541 HAGDFMRRFCSNLAM-SNHAVKAAQEAVQK-SEEFDIR-RSPISIAAVVIYIITQLSDDK 371
+A D R+CS L + S VK +Q +K S D+ RSP+S+AA IY+ + L
Sbjct: 241 NAKDLCTRYCSQLGLKSQQFVKVSQGLAEKVSTVGDLAGRSPLSVAAACIYMASALLGKP 300
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSK-IAPSWYA 260
K+ KDIS GV++GTIR +YK LY K I P W A
Sbjct: 301 KSAKDISQVAGVSDGTIRTAYKYLYADREKLIEPEWIA 338
[91][TOP]
>UniRef100_C8S6Q6 Transcription factor TFIIB cyclin-related protein n=1
Tax=Ferroglobus placidus DSM 10642 RepID=C8S6Q6_FERPL
Length = 328
Score = 64.3 bits (155), Expect = 5e-09
Identities = 31/80 (38%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RFC+ L +S K A E ++K+EE ++ R P +AA IYI + L+ +++T +
Sbjct: 239 DYVPRFCAALGLSGEVQKKAIEIIKKAEEKELTSGRGPTGVAAAAIYIASILTGERRTQR 298
Query: 358 DISHATGVAEGTIRNSYKDL 299
+++ GV E TIRN YK+L
Sbjct: 299 EVAEVAGVTEVTIRNRYKEL 318
[92][TOP]
>UniRef100_Q6CD97 YALI0C02563p n=1 Tax=Yarrowia lipolytica RepID=Q6CD97_YARLI
Length = 324
Score = 63.5 bits (153), Expect = 9e-09
Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Frame = -3
Query: 535 GDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTL 362
G M R+CS+L +++ A++ V++++E RSPIS+AA IY+ L + +
Sbjct: 218 GALMPRYCSHLGLNSQVANLAEDIVKRAKEIGTLDGRSPISVAAAAIYMAAALYGNDMSA 277
Query: 361 KDISHATGVAEGTIRNSYKDLYPHLSKI 278
+ +S TGV++GTI+ SYK LY K+
Sbjct: 278 QRVSEKTGVSDGTIKTSYKHLYEAREKL 305
[93][TOP]
>UniRef100_B5IA78 TFIIB zinc-binding family n=1 Tax=Aciduliprofundum boonei T469
RepID=B5IA78_9EURY
Length = 312
Score = 63.5 bits (153), Expect = 9e-09
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDKKTLK 359
D++ RFCS L +S K A E ++ + E DI R P +AA IYI L +++T +
Sbjct: 223 DYIDRFCSKLKLSGEVKKKAYEIIKMARERDIISGRGPTGVAAAAIYIAAILMGERRTQR 282
Query: 358 DISHATGVAEGTIRNSYKDLYPHLS 284
+++ GV E TIRN YK+L L+
Sbjct: 283 EVAEVAGVTEVTIRNRYKELAEKLN 307
[94][TOP]
>UniRef100_A6SQ01 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana
B05.10 RepID=A6SQ01_BOTFB
Length = 348
Score = 63.2 bits (152), Expect = 1e-08
Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Frame = -3
Query: 541 HAGDFMRRFCSNLAM-SNHAVKAAQEAVQK-SEEFDIR-RSPISIAAVVIYIITQLSDDK 371
+A D R+CS L + S VK +Q +K S D+ RSP+S+AA IY+ + L
Sbjct: 240 NAKDLCTRYCSQLGLKSQQFVKISQGLAEKVSTVGDLAGRSPLSVAAACIYMASALLGKP 299
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSK-IAPSWYA 260
K+ K+IS GV++GTIR +YK LY K I P W A
Sbjct: 300 KSAKEISQVAGVSDGTIRTAYKYLYADREKLIEPEWIA 337
[95][TOP]
>UniRef100_C5M3D9 Transcription initiation factor IIB n=1 Tax=Candida tropicalis
MYA-3404 RepID=C5M3D9_CANTT
Length = 347
Score = 62.8 bits (151), Expect = 2e-08
Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Frame = -3
Query: 538 AGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQ-LSDDKK 368
A D +RRFCS+L ++ ++ +K E I RSP +IAA IY+ + L D K
Sbjct: 239 AEDLIRRFCSHLGLNPIITNGSEYIARKCNELGILAGRSPTTIAATSIYLAAKVLGDTKL 298
Query: 367 TLKDISHATGVAEGTIRNSYKDLYPHLSKIA-PSW 266
T + I TGV+ GTI+NSYK LY ++ PSW
Sbjct: 299 TQQQIRDKTGVSIGTIKNSYKILYEKARELVDPSW 333
[96][TOP]
>UniRef100_Q6BPC4 DEHA2E14762p n=1 Tax=Debaryomyces hansenii RepID=Q6BPC4_DEBHA
Length = 346
Score = 62.0 bits (149), Expect = 3e-08
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Frame = -3
Query: 538 AGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKT 365
A D +RRFCS+L +S AA+ ++ ++ + RSPI+IAA VIY+ +
Sbjct: 239 AEDLIRRFCSHLGLSTQVTNAAEHIARRCKDVGVLAGRSPITIAATVIYMAALVFGADLQ 298
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLK 242
I+ TGV++GTI+ SYK +Y ++ ++ + +K
Sbjct: 299 PSKIADKTGVSDGTIKTSYKVMYEEKERLIDPYWVESGKVK 339
[97][TOP]
>UniRef100_C4QVZ4 Transcription factor TFIIB, a general transcription factor n=1
Tax=Pichia pastoris GS115 RepID=C4QVZ4_PICPG
Length = 342
Score = 62.0 bits (149), Expect = 3e-08
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Frame = -3
Query: 520 RFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLKDISH 347
RFCSNL +S AA+ ++++E + RSP+++AA VIY+ + D + I+
Sbjct: 241 RFCSNLGLSRQITNAAEYIARRTKEVGVLAGRSPVTVAATVIYMAASIFDASISPAQIAQ 300
Query: 346 ATGVAEGTIRNSYKDLYPHLSKIA-PSW 266
GV++GTI+ SYK LY ++ P W
Sbjct: 301 RAGVSDGTIKTSYKYLYDKREELVDPQW 328
[98][TOP]
>UniRef100_A5DBP0 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
RepID=A5DBP0_PICGU
Length = 339
Score = 62.0 bits (149), Expect = 3e-08
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Frame = -3
Query: 538 AGDFMRRFCSNLAMSNHAVKAAQEAVQ--KSEEFDIRRSPISIAAVVIYIITQLSDDKKT 365
A D +RRFCS+L +S AA+ + K E+ RSPI++AA VIY+ + + + +
Sbjct: 237 AEDLIRRFCSHLGLSTQISNAAEYIARRCKDEQILSGRSPITVAATVIYMASLIFNVDVS 296
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIA-PSW 266
I+ GV++GTI+ SYK L+ KI PSW
Sbjct: 297 PARIADKAGVSDGTIKTSYKVLFEEKDKILDPSW 330
[99][TOP]
>UniRef100_A2STL9 Transcription initiation factor IIB (TFIIB) n=1
Tax=Methanocorpusculum labreanum Z RepID=A2STL9_METLZ
Length = 340
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = -3
Query: 535 GDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTL 362
GD++ RFCS L + A E ++++ E ++ R P +AA IYI + LS +++T
Sbjct: 250 GDYVPRFCSGLGLKGEVQSRAMEILKQAGERELTSGRGPTGVAAAAIYISSILSGERRTQ 309
Query: 361 KDISHATGVAEGTIRNSYKDLYPHL 287
++++ GV E TIRN YK+L L
Sbjct: 310 REVADVAGVTEVTIRNRYKELAEQL 334
[100][TOP]
>UniRef100_O28970 Transcription initiation factor IIB n=1 Tax=Archaeoglobus fulgidus
RepID=TF2B_ARCFU
Length = 326
Score = 62.0 bits (149), Expect = 3e-08
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RFC+ L +S K A E ++K+EE ++ R P +AA +Y+ + L +++T +
Sbjct: 237 DYIPRFCAALGLSGEVQKKAIEIIKKAEERELTSGRGPTGVAAAALYVASILLGERRTQR 296
Query: 358 DISHATGVAEGTIRNSYKDL 299
+++ GV E TIRN YK+L
Sbjct: 297 EVAEVAGVTEVTIRNRYKEL 316
[101][TOP]
>UniRef100_Q4P519 Putative uncharacterized protein n=1 Tax=Ustilago maydis
RepID=Q4P519_USTMA
Length = 375
Score = 61.6 bits (148), Expect = 4e-08
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = -3
Query: 538 AGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKT 365
A D + R+C++L + ++ ++ + E I RSPI+IAA IY T L K
Sbjct: 268 AADLVGRYCNHLGLEMRITRSTEDITARVRELGILAGRSPITIAAACIYFSTLLWGVDKG 327
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIA 275
K IS A GV++ TI+NS+K+L H KIA
Sbjct: 328 AKRISQAAGVSDVTIKNSFKELLKHKDKIA 357
[102][TOP]
>UniRef100_B9W7D6 Transcription initiation factor IIB, putative (General
transcription factor tfiib, putative) (Transcription
factor e, putative) n=1 Tax=Candida dubliniensis CD36
RepID=B9W7D6_CANDC
Length = 344
Score = 61.6 bits (148), Expect = 4e-08
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Frame = -3
Query: 538 AGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKT 365
A D +RRFCS+L ++ A+ ++ +E + RSP +IAA VIY+ + +
Sbjct: 237 AEDLIRRFCSHLGVNTQVTNGAEYIARRCKEVGVLAGRSPTTIAATVIYMASLVFGFDLP 296
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSK-IAPSW 266
IS TGV++GTI+ SYK +Y K I PSW
Sbjct: 297 PSKISDKTGVSDGTIKTSYKYMYEEKEKLIDPSW 330
[103][TOP]
>UniRef100_A5DW20 Transcription initiation factor IIB n=1 Tax=Lodderomyces
elongisporus RepID=A5DW20_LODEL
Length = 349
Score = 61.6 bits (148), Expect = 4e-08
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Frame = -3
Query: 538 AGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKT 365
A D +RRFCS+L ++ AA+ ++++E + RSP +IAA VIY+ +
Sbjct: 242 AEDLIRRFCSHLGLNTQVTNAAEHIARRAKEVGVLAGRSPTTIAATVIYMACMVFGIDMP 301
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLK 242
IS TGV++GTI+ S+K LY K+ ++ + +K
Sbjct: 302 PSKISDKTGVSDGTIKTSHKYLYEARDKLIDPYWVESGKVK 342
[104][TOP]
>UniRef100_Q6KZC9 Transcription initiation factor IIB n=1 Tax=Picrophilus torridus
RepID=Q6KZC9_PICTO
Length = 310
Score = 61.2 bits (147), Expect = 5e-08
Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RFCS L +S A K A+E ++ + + D+ + P +AA IYI + ++ +++T +
Sbjct: 221 DYVNRFCSKLRLSMEARKRAEEILKMAVDNDLTSGKGPTGVAAAAIYIASLITGERRTQR 280
Query: 358 DISHATGVAEGTIRNSYKDLYPHLS 284
I+ GV E TIRN YK+L L+
Sbjct: 281 AIAEVAGVTEVTIRNRYKELTEKLN 305
[105][TOP]
>UniRef100_UPI000038E008 transcription initiation factor IIB n=1 Tax=Ferroplasma acidarmanus
fer1 RepID=UPI000038E008
Length = 311
Score = 60.8 bits (146), Expect = 6e-08
Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RFCS L +S A K A+E ++ + + D+ + P +AA IYI + ++ +++T +
Sbjct: 222 DYVNRFCSKLRLSMEARKRAEEILKMAIDNDLTSGKGPTGVAAAAIYIASLITGERRTQR 281
Query: 358 DISHATGVAEGTIRNSYKDLYPHLS 284
I+ GV E TIRN YK+L L+
Sbjct: 282 AIAEVAGVTEVTIRNRYKELTEKLN 306
[106][TOP]
>UniRef100_A8PRW9 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS
7966 RepID=A8PRW9_MALGO
Length = 151
Score = 60.8 bits (146), Expect = 6e-08
Identities = 33/100 (33%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDK 371
+ A D + R+C++L + V+ + + +E RSPI+IAA IY++T L +++
Sbjct: 41 VGASDLVARYCNHLGLDMSIVRVTEAITMRIQEQGCLAGRSPITIAAATIYLVTMLVNEQ 100
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKI-APSWYAKE 254
+T + IS A GV++ TI++SY++L L ++ P AK+
Sbjct: 101 RTARRISVAAGVSDVTIKHSYRELLKVLDQVLTPDIIAKD 140
[107][TOP]
>UniRef100_Q98S45 Transcription initiation factor IIB n=1 Tax=Guillardia theta
RepID=Q98S45_GUITH
Length = 325
Score = 60.5 bits (145), Expect = 8e-08
Identities = 34/89 (38%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQ--KSEEFDIRRSPISIAAVVIYIITQLSD--DKKT 365
+F+ RFCS L +S+ + K A++ K +E R+ IS+AA IY+++Q+ + +
Sbjct: 214 NFISRFCSKLGLSSTSSKIAEQIANFIKDKEGMYGRNYISVAAASIYVVSQIPNLSNNCN 273
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKI 278
LK I ATGV+E T+R++YK +YP+ +I
Sbjct: 274 LKKIIEATGVSEITLRSAYKAMYPYRKEI 302
[108][TOP]
>UniRef100_C4V7B4 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01
RepID=C4V7B4_NOSCE
Length = 333
Score = 60.5 bits (145), Expect = 8e-08
Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQL-SDDKKTL 362
D + RFCS+L ++ + A K +E I +SP SIAA +IY++T L + +K
Sbjct: 229 DIVARFCSDLRLNIKIQRLAFAISAKVQEAGILAGKSPDSIAAAIIYMVTYLVPEGRKVQ 288
Query: 361 KDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNL 236
KDI + T V E TI+N+YK+L + I P+ +E + NL
Sbjct: 289 KDIQYVTNVTEVTIKNTYKELAIFKNVIIPTDIVSQEAIDNL 330
[109][TOP]
>UniRef100_B2WF38 Transcription initiation factor IIB n=1 Tax=Pyrenophora
tritici-repentis Pt-1C-BFP RepID=B2WF38_PYRTR
Length = 338
Score = 60.5 bits (145), Expect = 8e-08
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Frame = -3
Query: 538 AGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKT 365
A M R C+ LA+ A+E + + + RSP+SIA +Y+++ L K+
Sbjct: 232 ASSLMPRACAKLALGTQVQMVAEECADQVAHYGVAAGRSPLSIAGACLYLVSHLMGQPKS 291
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSK-IAPSWYAKEED 248
K+I A V++GTIR +YK ++ K I P W AK D
Sbjct: 292 PKEIGLAVEVSDGTIRTAYKLMHMEQDKIIKPEWIAKGGD 331
[110][TOP]
>UniRef100_B5I9V2 TFIIB zinc-binding family n=1 Tax=Aciduliprofundum boonei T469
RepID=B5I9V2_9EURY
Length = 313
Score = 60.5 bits (145), Expect = 8e-08
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Frame = -3
Query: 538 AGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKT 365
A ++ +FCS L + + V A+E VQ++ E I + P +AA IYI + ++ +T
Sbjct: 222 ATSYITQFCSKLHLDKNVVNKAEEIVQQATERGITSGKGPTGVAAAAIYIAANMMNEPRT 281
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
K+I+ GV E TIRN YK++ L+ P
Sbjct: 282 QKEIAEVAGVTEVTIRNRYKEISSALNVEIP 312
[111][TOP]
>UniRef100_Q8SRP3 Transcription initiation factor IIB n=1 Tax=Encephalitozoon
cuniculi RepID=TF2B_ENCCU
Length = 312
Score = 60.5 bits (145), Expect = 8e-08
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQL-SDDKKTL 362
+ + RFCS+L ++ K A E + + E +SP SIAA VIY++T L ++KK
Sbjct: 208 NIIARFCSDLNLNIKIQKIATEIAKAAHELGCLAGKSPDSIAAAVIYMVTNLFPEEKKIQ 267
Query: 361 KDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNL 236
KDI T V E TI+N+YK+L I P +E + L
Sbjct: 268 KDIQFVTNVTEVTIKNTYKELLTFKYDIIPENMVNKESIDKL 309
[112][TOP]
>UniRef100_Q5AHZ3 Likely transcription factor TFIIB n=1 Tax=Candida albicans
RepID=Q5AHZ3_CANAL
Length = 344
Score = 60.1 bits (144), Expect = 1e-07
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Frame = -3
Query: 538 AGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKT 365
A D +RRFCS+L ++ A+ ++ +E + RSP +IAA VIY+ + +
Sbjct: 237 AEDLIRRFCSHLGVNTQVTNGAEYIARRCKEVGVLAGRSPTTIAATVIYMASLVFGFDLP 296
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSK-IAPSW 266
IS TGV++GTI+ SYK +Y + I PSW
Sbjct: 297 PSKISDKTGVSDGTIKTSYKYMYEEKEQLIDPSW 330
[113][TOP]
>UniRef100_Q59M46 Likely transcription factor TFIIB n=1 Tax=Candida albicans
RepID=Q59M46_CANAL
Length = 176
Score = 60.1 bits (144), Expect = 1e-07
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Frame = -3
Query: 538 AGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQ-LSDDKK 368
A D +RRFCS+L +S A++ +K + + RSP +IAA I++ + L D K
Sbjct: 68 AEDLIRRFCSHLGLSLAITSASEYVARKCHDLGVLAGRSPTTIAATSIFLAAKSLGDTKL 127
Query: 367 TLKDISHATGVAEGTIRNSYKDLYPHLSK-IAPSWYAKEE 251
T + I TGV+ GTI+NSYK L + I P+W A +
Sbjct: 128 TQQQIRDKTGVSIGTIKNSYKILQENAKDLIDPAWEANSK 167
[114][TOP]
>UniRef100_Q59K82 Transcription initiation factor IIB n=1 Tax=Candida albicans
RepID=Q59K82_CANAL
Length = 346
Score = 60.1 bits (144), Expect = 1e-07
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Frame = -3
Query: 538 AGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQ-LSDDKK 368
A D +RRFCS+L +S A++ +K + + RSP +IAA I++ + L D K
Sbjct: 238 AEDLIRRFCSHLGLSLAITSASEYVARKCHDLGVLAGRSPTTIAATSIFLAAKSLGDTKL 297
Query: 367 TLKDISHATGVAEGTIRNSYKDLYPHLSK-IAPSWYAKEE 251
T + I TGV+ GTI+NSYK L + I P+W A +
Sbjct: 298 TQQQIRDKTGVSIGTIKNSYKILQENAKDLIDPAWEANSK 337
[115][TOP]
>UniRef100_A3DNM2 Transcription initiation factor IIB (TFIIB) n=1 Tax=Staphylothermus
marinus F1 RepID=A3DNM2_STAMF
Length = 309
Score = 60.1 bits (144), Expect = 1e-07
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
DF+ R L +S +K A E + ++ + P +AA +YI QLS +++T K
Sbjct: 219 DFIPRIAHALNLSGSVMKKAAEILHRARSLGVTAGNDPAGLAAAAVYIAAQLSGERRTQK 278
Query: 358 DISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
+I+H GV E T+RN YK+L L P+
Sbjct: 279 EIAHVAGVTEVTVRNRYKELAKELGIDLPT 308
[116][TOP]
>UniRef100_O13749 Transcription initiation factor IIB n=1 Tax=Schizosaccharomyces
pombe RepID=TF2B_SCHPO
Length = 340
Score = 60.1 bits (144), Expect = 1e-07
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Frame = -3
Query: 538 AGDFMRRFCSNLAMSNHAVKAAQEAVQKS--EEFDIRRSPISIAAVVIYIITQLSDDKKT 365
A D M RFC+ L + AA E +++ + RSPISIAA IY+I+ L KT
Sbjct: 232 AEDLMVRFCNRLMLPMSVQSAAAELARRAGLQGTLAGRSPISIAASGIYMISALMGYPKT 291
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSK-IAPSWYAKE 254
K+IS TGV++ TIR +YK L+ + I P W A +
Sbjct: 292 PKEISEVTGVSDSTIRIAYKLLHAERKELIDPKWIANK 329
[117][TOP]
>UniRef100_UPI000151A977 hypothetical protein PGUG_00695 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151A977
Length = 339
Score = 59.7 bits (143), Expect = 1e-07
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Frame = -3
Query: 538 AGDFMRRFCSNLAMSNHAVKAAQEAVQ--KSEEFDIRRSPISIAAVVIYIITQLSDDKKT 365
A D +RRFCS+L +S AA+ + K E+ RSPI++AA VIY+ + + + +
Sbjct: 237 AEDLIRRFCSHLGLSTQISNAAEYIARRCKDEQILSGRSPITVAATVIYMASLIFNVDVS 296
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIA-PSW 266
I+ GV++GTI+ SYK L+ KI P W
Sbjct: 297 PARIADKAGVSDGTIKTSYKVLFEEKDKILDPLW 330
[118][TOP]
>UniRef100_Q93YB0 TFIIB-related protein (Fragment) n=1 Tax=Spinacia oleracea
RepID=Q93YB0_SPIOL
Length = 414
Score = 59.7 bits (143), Expect = 1e-07
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = -3
Query: 526 MRRFCSNLAMSNHAVKAAQEA--VQKSEEFDIRRSPISIAAVVIYIITQLSDDKKTLKDI 353
M RFC+ L ++ A + A V ++ F RR+PISI+A IY+ QL D +KT +I
Sbjct: 226 MPRFCNLLQLNKSAQELATHIGEVVMNKCFCTRRNPISISAAAIYLACQLEDRRKTQAEI 285
Query: 352 SHATGVAEGTIRNSYKDLYPHLSKIAPSWY 263
TG+ E T+R YK+L + + PS Y
Sbjct: 286 CKVTGLTEVTLRKVYKELLENWDDLLPSNY 315
[119][TOP]
>UniRef100_A5UKA1 Transcription initiation factor IIB n=2 Tax=Methanobrevibacter
smithii RepID=TF2B_METS3
Length = 310
Score = 59.7 bits (143), Expect = 1e-07
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RF S L +S A A E ++K+ E + R P +AA +YI + L ++KT +
Sbjct: 221 DYVPRFASELGLSGEAQSRAIEIIEKAMEKGLTSGRGPTGVAAAALYIASVLLGERKTQR 280
Query: 358 DISHATGVAEGTIRNSYKDLYPHL 287
D++ GV E TIRN YK+L L
Sbjct: 281 DVADIAGVTEVTIRNRYKELTEQL 304
[120][TOP]
>UniRef100_UPI0001983170 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001983170
Length = 540
Score = 59.3 bits (142), Expect = 2e-07
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = -3
Query: 526 MRRFCSNLAMSNHAVKAAQEA--VQKSEEFDIRRSPISIAAVVIYIITQLSDDKKTLKDI 353
M RFC+ L ++ A + A V ++ F RR+PISI+A IY+ QL D +KT +I
Sbjct: 253 MPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEI 312
Query: 352 SHATGVAEGTIRNSYKDLYPHLSKIAPSWY 263
TG+ E T+R YK+L + + PS Y
Sbjct: 313 CKVTGLTEVTLRKVYKELLENWDDLLPSNY 342
[121][TOP]
>UniRef100_Q9FYX3 BAC19.3 n=1 Tax=Solanum lycopersicum RepID=Q9FYX3_SOLLC
Length = 425
Score = 59.3 bits (142), Expect = 2e-07
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = -3
Query: 526 MRRFCSNLAMSNHAVKAAQEA--VQKSEEFDIRRSPISIAAVVIYIITQLSDDKKTLKDI 353
M RFC+ L ++ A + A V ++ F RR+PISI+A IY+ QL D +KT +I
Sbjct: 233 MPRFCTLLQLNKSAQELATHIGEVIINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEI 292
Query: 352 SHATGVAEGTIRNSYKDLYPHLSKIAPSWY 263
TG+ E T+R YK+L + + PS Y
Sbjct: 293 CKVTGLTEVTLRKVYKELLENWDDLLPSSY 322
[122][TOP]
>UniRef100_Q93WQ2 TFIIB-related protein (Fragment) n=1 Tax=Zea mays
RepID=Q93WQ2_MAIZE
Length = 469
Score = 59.3 bits (142), Expect = 2e-07
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = -3
Query: 526 MRRFCSNLAMSNHAVKAAQEA--VQKSEEFDIRRSPISIAAVVIYIITQLSDDKKTLKDI 353
M RFCS L ++ A + A V ++ F RR+PISI+A IY+ QL D +KT +I
Sbjct: 186 MPRFCSLLQLNKSAQELAAHIGEVVANKCFCTRRNPISISAAAIYLACQLEDKRKTQAEI 245
Query: 352 SHATGVAEGTIRNSYKDLYPHLSKIAPSWY 263
TG+ E T+R YK+L + + P Y
Sbjct: 246 CKVTGLTEVTLRKVYKELLENWDDLLPPDY 275
[123][TOP]
>UniRef100_B9VXZ5 Transcription factor IIB n=1 Tax=Capsicum annuum RepID=B9VXZ5_CAPAN
Length = 426
Score = 59.3 bits (142), Expect = 2e-07
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = -3
Query: 526 MRRFCSNLAMSNHAVKAAQEA--VQKSEEFDIRRSPISIAAVVIYIITQLSDDKKTLKDI 353
M RFC+ L ++ A + A V ++ F RR+PISI+A IY+ QL D +KT +I
Sbjct: 234 MPRFCTLLQLNKSAQELATHIGEVIINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEI 293
Query: 352 SHATGVAEGTIRNSYKDLYPHLSKIAPSWY 263
TG+ E T+R YK+L + + PS Y
Sbjct: 294 CKVTGLTEVTLRKVYKELLENWDDLLPSSY 323
[124][TOP]
>UniRef100_B9S6G3 RNA polymerase II transcription factor, putative n=1 Tax=Ricinus
communis RepID=B9S6G3_RICCO
Length = 511
Score = 59.3 bits (142), Expect = 2e-07
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = -3
Query: 526 MRRFCSNLAMSNHAVKAAQEA--VQKSEEFDIRRSPISIAAVVIYIITQLSDDKKTLKDI 353
M RFC+ L ++ A + A V ++ F RR+PISI+A IY+ QL D +KT +I
Sbjct: 233 MPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEI 292
Query: 352 SHATGVAEGTIRNSYKDLYPHLSKIAPSWY 263
TG+ E T+R YK+L + + PS Y
Sbjct: 293 CKVTGLTEVTLRKVYKELLENWDDLLPSNY 322
[125][TOP]
>UniRef100_A9XLD7 Putative uncharacterized protein n=1 Tax=Capsicum frutescens
RepID=A9XLD7_CAPFR
Length = 426
Score = 59.3 bits (142), Expect = 2e-07
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = -3
Query: 526 MRRFCSNLAMSNHAVKAAQEA--VQKSEEFDIRRSPISIAAVVIYIITQLSDDKKTLKDI 353
M RFC+ L ++ A + A V ++ F RR+PISI+A IY+ QL D +KT +I
Sbjct: 234 MPRFCTLLQLNKSAQELATHIGEVIINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEI 293
Query: 352 SHATGVAEGTIRNSYKDLYPHLSKIAPSWY 263
TG+ E T+R YK+L + + PS Y
Sbjct: 294 CKVTGLTEVTLRKVYKELLENWDDLLPSSY 323
[126][TOP]
>UniRef100_A7PUX2 Chromosome chr4 scaffold_32, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PUX2_VITVI
Length = 523
Score = 59.3 bits (142), Expect = 2e-07
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = -3
Query: 526 MRRFCSNLAMSNHAVKAAQEA--VQKSEEFDIRRSPISIAAVVIYIITQLSDDKKTLKDI 353
M RFC+ L ++ A + A V ++ F RR+PISI+A IY+ QL D +KT +I
Sbjct: 236 MPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEI 295
Query: 352 SHATGVAEGTIRNSYKDLYPHLSKIAPSWY 263
TG+ E T+R YK+L + + PS Y
Sbjct: 296 CKVTGLTEVTLRKVYKELLENWDDLLPSNY 325
[127][TOP]
>UniRef100_B1B3Q8 Putative uncharacterized protein agf4 (Fragment) n=1 Tax=Sorogena
stoianovitchae RepID=B1B3Q8_9CILI
Length = 147
Score = 59.3 bits (142), Expect = 2e-07
Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = -3
Query: 433 RSPISIAAVVIYIITQLS-DDKKTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPSW 266
R+P +IAA IYII+ LS DD+KTLKDIS + +AE TI+ Y+DLY I P W
Sbjct: 80 RNPRTIAATSIYIISLLSKDDRKTLKDISALSDIAENTIKTCYRDLYXQRFDIIPKW 136
[128][TOP]
>UniRef100_Q0DUA7 Os03g0196900 protein (Fragment) n=2 Tax=Oryza sativa Japonica Group
RepID=Q0DUA7_ORYSJ
Length = 295
Score = 58.9 bits (141), Expect = 2e-07
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = -3
Query: 526 MRRFCSNLAMSNHAVKAAQEA--VQKSEEFDIRRSPISIAAVVIYIITQLSDDKKTLKDI 353
M RFCS L ++ A + A V ++ F RR+PISI+A IY+ QL D +KT +I
Sbjct: 18 MPRFCSLLQLNKSAQELAAHIGEVVVNKCFCTRRNPISISAAAIYLACQLEDKRKTQAEI 77
Query: 352 SHATGVAEGTIRNSYKDLYPHLSKIAPSWY 263
TG+ E T+R YK+L + + P Y
Sbjct: 78 CKVTGLTEVTLRKVYKELLENWDDLLPPNY 107
[129][TOP]
>UniRef100_O23215 Transcription initiation factor like protein n=1 Tax=Arabidopsis
thaliana RepID=O23215_ARATH
Length = 503
Score = 58.9 bits (141), Expect = 2e-07
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = -3
Query: 526 MRRFCSNLAMSNHAVKAAQEA--VQKSEEFDIRRSPISIAAVVIYIITQLSDDKKTLKDI 353
M RFC+ L ++ A + A V ++ F RR+PISI+A IY+ QL D +KT +I
Sbjct: 233 MPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEI 292
Query: 352 SHATGVAEGTIRNSYKDLYPHLSKIAPSWY 263
TG+ E T+R YK+L + + PS Y
Sbjct: 293 CKITGLTEVTLRKVYKELLENWDDLLPSNY 322
[130][TOP]
>UniRef100_C5WUN9 Putative uncharacterized protein Sb01g044030 n=1 Tax=Sorghum
bicolor RepID=C5WUN9_SORBI
Length = 533
Score = 58.9 bits (141), Expect = 2e-07
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = -3
Query: 526 MRRFCSNLAMSNHAVKAAQEA--VQKSEEFDIRRSPISIAAVVIYIITQLSDDKKTLKDI 353
M RFCS L ++ A + A V ++ F RR+PISI+A IY+ QL D +KT +I
Sbjct: 249 MPRFCSLLQLNKSAQELAAHIGEVVVNKCFCTRRNPISISAAAIYLACQLEDKRKTQAEI 308
Query: 352 SHATGVAEGTIRNSYKDLYPHLSKIAPSWY 263
TG+ E T+R YK+L + + P Y
Sbjct: 309 CKVTGLTEVTLRKVYKELLENWDDLLPPDY 338
[131][TOP]
>UniRef100_A3AF39 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=A3AF39_ORYSJ
Length = 501
Score = 58.9 bits (141), Expect = 2e-07
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = -3
Query: 526 MRRFCSNLAMSNHAVKAAQEA--VQKSEEFDIRRSPISIAAVVIYIITQLSDDKKTLKDI 353
M RFCS L ++ A + A V ++ F RR+PISI+A IY+ QL D +KT +I
Sbjct: 224 MPRFCSLLQLNKSAQELAAHIGEVVVNKCFCTRRNPISISAAAIYLACQLEDKRKTQAEI 283
Query: 352 SHATGVAEGTIRNSYKDLYPHLSKIAPSWY 263
TG+ E T+R YK+L + + P Y
Sbjct: 284 CKVTGLTEVTLRKVYKELLENWDDLLPPNY 313
[132][TOP]
>UniRef100_A2XDJ3 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2XDJ3_ORYSI
Length = 529
Score = 58.9 bits (141), Expect = 2e-07
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = -3
Query: 526 MRRFCSNLAMSNHAVKAAQEA--VQKSEEFDIRRSPISIAAVVIYIITQLSDDKKTLKDI 353
M RFCS L ++ A + A V ++ F RR+PISI+A IY+ QL D +KT +I
Sbjct: 252 MPRFCSLLQLNKSAQELAAHIGEVVVNKCFCTRRNPISISAAAIYLACQLEDKRKTQAEI 311
Query: 352 SHATGVAEGTIRNSYKDLYPHLSKIAPSWY 263
TG+ E T+R YK+L + + P Y
Sbjct: 312 CKVTGLTEVTLRKVYKELLENWDDLLPPNY 341
[133][TOP]
>UniRef100_C5MER5 Transcription initiation factor IIB n=1 Tax=Candida tropicalis
MYA-3404 RepID=C5MER5_CANTT
Length = 344
Score = 58.9 bits (141), Expect = 2e-07
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Frame = -3
Query: 538 AGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKT 365
A D +RRFCS+L ++ A+ ++ +E + RSP +IAA VIY+ + +
Sbjct: 237 AEDLIRRFCSHLGVNAQVTNGAEYIARRCKEVGVLAGRSPTTIAATVIYMASLVFGIDLP 296
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLK 242
IS TGV++GTI+ SYK +Y K+ ++ + +K
Sbjct: 297 PSKISDKTGVSDGTIKTSYKYMYEEKEKLIDPYWVESGKVK 337
[134][TOP]
>UniRef100_B9WLX5 Transcription initiation factor IIB, putative (General
transcription facto tfiib, putative) n=1 Tax=Candida
dubliniensis CD36 RepID=B9WLX5_CANDC
Length = 346
Score = 58.9 bits (141), Expect = 2e-07
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Frame = -3
Query: 538 AGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQ-LSDDKK 368
A D +RRFCS+L +S A++ +K + + RSP +IAA I++ + L D K
Sbjct: 238 AEDLIRRFCSHLGLSLTITSASEYVARKCHDLGVLAGRSPTTIAATSIFLAAKSLGDTKL 297
Query: 367 TLKDISHATGVAEGTIRNSYKDLYPHLSK-IAPSW 266
T + I TGV+ GTI+NSYK L + I P+W
Sbjct: 298 TQQQIRDKTGVSIGTIKNSYKILQENAKDLIDPAW 332
[135][TOP]
>UniRef100_B8D3B4 Transcription initiation factor IIB (TFIIB) n=1 Tax=Desulfurococcus
kamchatkensis 1221n RepID=B8D3B4_DESK1
Length = 319
Score = 58.9 bits (141), Expect = 2e-07
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ R L + AVK A E + K++E + + P +AA +YI + +K+T K
Sbjct: 231 DYVPRIVHGLGLPGQAVKIAIEIINKAKEQGVTGGKDPAGLAAAAVYIAAEQLGEKRTQK 290
Query: 358 DISHATGVAEGTIRNSYKDL 299
+I+H GV E T+RN YK+L
Sbjct: 291 EIAHVAGVTEVTVRNRYKEL 310
[136][TOP]
>UniRef100_Q975S1 Transcription initiation factor IIB n=1 Tax=Sulfolobus tokodaii
RepID=TF2B_SULTO
Length = 308
Score = 58.9 bits (141), Expect = 2e-07
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ R S L +S +K A + ++K++E + + P +AA IYI L+D+++T K
Sbjct: 218 DYVTRIGSLLGLSGSTMKMAIDIIEKAKESGLTAGKDPAGLAAAAIYIAALLNDERRTQK 277
Query: 358 DISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
+I+ GV E T+RN YK+L L P+
Sbjct: 278 EIAQIAGVTEVTVRNRYKELTQELKIQIPN 307
[137][TOP]
>UniRef100_Q0W302 Transcription initiation factor IIB n=1 Tax=uncultured methanogenic
archaeon RC-I RepID=Q0W302_UNCMA
Length = 337
Score = 58.5 bits (140), Expect = 3e-07
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RFCS L++ A E ++++ E ++ R P +AA IYI + L +++T +
Sbjct: 248 DYVPRFCSGLSLKGEVQSKAVEILRQAAEKELTSGRGPTGVAAAAIYISSILCGERRTQR 307
Query: 358 DISHATGVAEGTIRNSYKDLYPHL 287
++++ GV E TIRN YK+L L
Sbjct: 308 EVANVAGVTEVTIRNRYKELAEEL 331
[138][TOP]
>UniRef100_P50387 Transcription initiation factor IIB n=1 Tax=Sulfolobus shibatae
RepID=TF2B_SULSH
Length = 309
Score = 58.5 bits (140), Expect = 3e-07
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ R + L +S +K A E + K++ + + P +AA IYI + L D+++T K
Sbjct: 219 DYVTRIANLLGLSGRVMKTAAEIIDKAKGSGLTAGKDPAGLAAAAIYIASLLHDERRTQK 278
Query: 358 DISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
+I+ GV E T+RN YK+L L P+
Sbjct: 279 EIAQVAGVTEVTVRNRYKELTQELKISIPT 308
[139][TOP]
>UniRef100_Q9UWN6 Transcription initiation factor IIB n=1 Tax=Sulfolobus
acidocaldarius RepID=TF2B_SULAC
Length = 307
Score = 58.5 bits (140), Expect = 3e-07
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ R + L++S +K A E ++K++ + + P +AA IYI L+D+++T K
Sbjct: 217 DYVTRIGTLLSLSGITMKHAAEIIEKAKNSGLTAGKDPAGLAAAAIYIAALLNDERRTQK 276
Query: 358 DISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
+I+ GV E T+RN YK+L L PS
Sbjct: 277 EIAQVAGVTEVTVRNRYKELTQELKIQIPS 306
[140][TOP]
>UniRef100_Q05959 Transcription initiation factor IIB n=1 Tax=Kluyveromyces lactis
RepID=TF2B_KLULA
Length = 357
Score = 58.5 bits (140), Expect = 3e-07
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = -3
Query: 538 AGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKT 365
A F+ RFCS+L +S AA+ + S++ ++ RSPI+IAA IY+ T L +
Sbjct: 241 AETFIPRFCSHLGLSVQVANAAEYIAKHSKDVNVLAGRSPITIAAAAIYMATLLFKLNIS 300
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKI 278
IS V EGT++ YK LY H K+
Sbjct: 301 PTRISQTLQVTEGTVKGGYKALYEHKEKV 329
[141][TOP]
>UniRef100_Q6E6D9 Transcription initiation factor TFIIB n=1 Tax=Antonospora locustae
RepID=Q6E6D9_ANTLO
Length = 306
Score = 58.2 bits (139), Expect = 4e-07
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTL- 362
D + RFCSNL + + A K A Q + DI +S SIAA ++Y++T + K++
Sbjct: 202 DIVSRFCSNLDLGHDAEKLAVAIAQNVQRLDILTGKSTDSIAAAIVYLVTNVFSQHKSMQ 261
Query: 361 KDISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
K + + + V + TI+N YK+L H ++ PS
Sbjct: 262 KFLQNTSNVTDVTIKNVYKELVLHKEEVIPS 292
[142][TOP]
>UniRef100_B9HEV3 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9HEV3_POPTR
Length = 278
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = -3
Query: 526 MRRFCSNLAMSNHAVKAAQEA--VQKSEEFDIRRSPISIAAVVIYIITQLSDDKKTLKDI 353
M RFC+ L ++ A + A V ++ F RR+PISI+A IY+ QL D +KT +I
Sbjct: 165 MPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEI 224
Query: 352 SHATGVAEGTIRNSYKDLYPHLSKIAPSWY 263
TG+ E T+R YK+L + + P Y
Sbjct: 225 CKVTGLTEVTLRKVYKELLENWGDLLPKNY 254
[143][TOP]
>UniRef100_A8IM89 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IM89_CHLRE
Length = 312
Score = 57.8 bits (138), Expect = 5e-07
Identities = 27/71 (38%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Frame = -3
Query: 433 RSPISIAAVVIYIITQLSDDK--KTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYA 260
R+P S+A+ V+ I L++ + + L ++ + VAEGTIR YKDL+PHL ++ P+
Sbjct: 242 RTPTSVASAVVLIAMALAEARFDEALSKVAVVSSVAEGTIRGVYKDLFPHLRELVPTESV 301
Query: 259 KEEDLKNLSSP 227
++E+L+ L +P
Sbjct: 302 RDEELQRLPNP 312
[144][TOP]
>UniRef100_Q0UK00 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
RepID=Q0UK00_PHANO
Length = 346
Score = 57.8 bits (138), Expect = 5e-07
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Frame = -3
Query: 538 AGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKT 365
A + M R C+ L + + A+E + E I RSP+SIA V+Y+++ L KT
Sbjct: 240 AENLMPRACNKLGLETYIQLVAEECARTVTEHGIAAGRSPLSIAGAVLYLVSHLMGTPKT 299
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSK-IAPSWYAKEEDLKNL 236
K+I A V++GTIR +YK ++ +K I W + D L
Sbjct: 300 PKEIGLAVEVSDGTIRTAYKLMHAQANKIIKEDWIRRGGDRSKL 343
[145][TOP]
>UniRef100_C4YES1 Transcription initiation factor IIB n=1 Tax=Candida albicans
RepID=C4YES1_CANAL
Length = 344
Score = 57.8 bits (138), Expect = 5e-07
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Frame = -3
Query: 538 AGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKT 365
A D +RRFCS+L ++ A+ ++ +E + RSP +IAA VIY+ + +
Sbjct: 237 AEDLIRRFCSHLGVNTQVTNGAEYIARRCKEVGVLAGRSPTTIAATVIYMASLVFGFDLP 296
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSK-IAPSW 266
IS TGV++GTI+ SYK +Y + I P W
Sbjct: 297 PSKISDKTGVSDGTIKTSYKYMYEEKEQLIDPFW 330
[146][TOP]
>UniRef100_C3MQW9 Transcription factor TFIIB cyclin-related n=5 Tax=Sulfolobus
islandicus RepID=C3MQW9_SULIL
Length = 309
Score = 57.8 bits (138), Expect = 5e-07
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ R + L +S +K A E + K++ + + P +AA IYI + L D+++T K
Sbjct: 219 DYVTRIANLLGLSGAVMKTAAEIIDKAKGSGLTAGKDPAGLAAAAIYIASLLHDERRTQK 278
Query: 358 DISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
+I+ GV E T+RN YK+L L P+
Sbjct: 279 EIAQVAGVTEVTVRNRYKELTQELKISIPT 308
[147][TOP]
>UniRef100_B8GJQ9 Transcription initiation factor IIB n=1 Tax=Methanosphaerula
palustris E1-9c RepID=TF2B_METPE
Length = 334
Score = 57.8 bits (138), Expect = 5e-07
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RFCS L + A E ++++ E ++ R P +AA IYI + L +++T +
Sbjct: 245 DYVPRFCSGLTLKGEVQSRAVEILRQAAERELTSGRGPTGVAAAAIYISSILGGERRTQR 304
Query: 358 DISHATGVAEGTIRNSYKDL 299
+++ GV E TIRN YK+L
Sbjct: 305 EVAEVAGVTEVTIRNRYKEL 324
[148][TOP]
>UniRef100_P58111 Transcription initiation factor IIB 1 n=2 Tax=Sulfolobus
solfataricus RepID=TF2B1_SULSO
Length = 309
Score = 57.8 bits (138), Expect = 5e-07
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ R + L +S +K A E + K++ + + P +AA IYI + L D+++T K
Sbjct: 219 DYVTRIANLLGLSGAVMKTAAEIIDKAKGSGLTAGKDPAGLAAAAIYIASLLHDERRTQK 278
Query: 358 DISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
+I+ GV E T+RN YK+L L P+
Sbjct: 279 EIAQVAGVTEVTVRNRYKELTQELKISIPT 308
[149][TOP]
>UniRef100_A4S6Z8 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S6Z8_OSTLU
Length = 390
Score = 57.4 bits (137), Expect = 7e-07
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 11/95 (11%)
Frame = -3
Query: 520 RFCSNLAMS--------NHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYI---ITQLSDD 374
RFC NL MS +H V+ +E ++ SE + P S+AA I+I + ++ D
Sbjct: 232 RFCGNLGMSDHDFLKLCSHIVRTFRE-LRDSEGHKSEKQPASVAAAAIFIASVVREMHKD 290
Query: 373 KKTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
K +L IS +G+AE TIR S+ D+ P+ S++ PS
Sbjct: 291 KASLFRISEVSGMAEVTIRTSFFDMVPYASRLLPS 325
[150][TOP]
>UniRef100_C5DJ37 KLTH0F13200p n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5DJ37_LACTC
Length = 359
Score = 57.4 bits (137), Expect = 7e-07
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = -3
Query: 538 AGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKT 365
A F+ RFCS+L +S AA+ + ++ ++ +SPI+IAA IY+ QL +
Sbjct: 241 AETFIPRFCSHLGLSVQIANAAEYTAKHCKDINVLAGKSPITIAASAIYLAIQLFKVNIS 300
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKI 278
+SH V EGTI+ YK LY K+
Sbjct: 301 ASQVSHTLQVTEGTIKGGYKILYEFRDKV 329
[151][TOP]
>UniRef100_A4YIU5 Transcription initiation factor IIB (TFIIB) n=1 Tax=Metallosphaera
sedula DSM 5348 RepID=A4YIU5_METS5
Length = 305
Score = 57.4 bits (137), Expect = 7e-07
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ R S L +S ++K A E ++K++ + + P +AA IYI L+++++T K
Sbjct: 215 DYVTRIGSLLGLSGASMKLAAEILEKAKNVGLTAGKDPAGLAAAAIYIAALLNEERRTQK 274
Query: 358 DISHATGVAEGTIRNSYKDLYPHL 287
+I+ GV E T+RN YK+L L
Sbjct: 275 EIAQVAGVTEVTVRNRYKELIQEL 298
[152][TOP]
>UniRef100_Q3L5A6 Hypothetical transcription initiation factor IIB-like protein
variant #2 (Fragment) n=1 Tax=Sulfolobus islandicus
RepID=Q3L5A6_SULIS
Length = 187
Score = 57.4 bits (137), Expect = 7e-07
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ R + L +S +K A E + K++ + + P +AA IYI + L D+++T K
Sbjct: 99 DYVTRIANLLGLSGAVMKTAAEIIDKAKGSGLTAGKDPAGLAAAAIYIASLLHDERRTQK 158
Query: 358 DISHATGVAEGTIRNSYKDLYPHLSKIAP 272
+I+ GV E T+RN YK+L L P
Sbjct: 159 EIAQVAGVTEVTVRNRYKELTQELKISIP 187
[153][TOP]
>UniRef100_Q3L5A4 Hypothetical transcription initiation factor IIB-like protein
variant #1 (Fragment) n=1 Tax=Sulfolobus islandicus
RepID=Q3L5A4_SULIS
Length = 187
Score = 57.4 bits (137), Expect = 7e-07
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ R + L +S +K A E + K++ + + P +AA IYI + L D+++T K
Sbjct: 99 DYVTRIANLLGLSGAVMKTAAEIIDKAKGSGLTAGKDPAGLAAAAIYIASLLHDERRTQK 158
Query: 358 DISHATGVAEGTIRNSYKDLYPHLSKIAP 272
+I+ GV E T+RN YK+L L P
Sbjct: 159 EIAQVAGVTEVTVRNRYKELTQELKISIP 187
[154][TOP]
>UniRef100_C8S977 Transcription factor TFIIB cyclin-related protein n=1
Tax=Ferroglobus placidus DSM 10642 RepID=C8S977_FERPL
Length = 346
Score = 57.4 bits (137), Expect = 7e-07
Identities = 27/80 (33%), Positives = 48/80 (60%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKT 365
I + D++ + C+ L +S + A E V ++E+ + RSP +AA +YI + L +++T
Sbjct: 255 ITSTDYVPKICAALGVSGEVQERALEIVNEAEKSMVSRSPAGVAAAAVYIASILLGERRT 314
Query: 364 LKDISHATGVAEGTIRNSYK 305
++++ GV E TIRN YK
Sbjct: 315 QREVAGVAGVTEVTIRNCYK 334
[155][TOP]
>UniRef100_A1RV37 Transcription initiation factor IIB n=1 Tax=Pyrobaculum islandicum
DSM 4184 RepID=TF2B_PYRIL
Length = 333
Score = 57.4 bits (137), Expect = 7e-07
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = -3
Query: 529 FMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLKD 356
++ R L +S VK A E +QK+++ I + P +AA +YI + L D +T KD
Sbjct: 244 YISRIAEQLKLSGEVVKTAIEILQKAKKAGITAGKDPAGLAAAAVYIASLLHGDNRTQKD 303
Query: 355 ISHATGVAEGTIRNSYKDLYPHLSKIAP 272
+ A GV E T+RN YK+L L+ P
Sbjct: 304 FAVAAGVTEVTVRNRYKELAKTLNIKVP 331
[156][TOP]
>UniRef100_A7IAR4 Transcription initiation factor IIB n=1 Tax=Candidatus
Methanoregula boonei 6A8 RepID=TF2B_METB6
Length = 334
Score = 57.4 bits (137), Expect = 7e-07
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RFCS L + A E ++++ E ++ R P +AA IYI + L +++T +
Sbjct: 245 DYVPRFCSGLTLKGEVQSRAVEILRQAGERELTSGRGPTGVAAAAIYISSILGGERRTQR 304
Query: 358 DISHATGVAEGTIRNSYKDL 299
+++ GV E TIRN YK+L
Sbjct: 305 EVAEVAGVTEVTIRNRYKEL 324
[157][TOP]
>UniRef100_B7XLT0 Transcription initiation factor IIB n=1 Tax=Enterocytozoon bieneusi
H348 RepID=B7XLT0_ENTBH
Length = 213
Score = 57.0 bits (136), Expect = 9e-07
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTL- 362
D + RFCS+L ++ A+ +K ++ RSP SIA+ +IY+ L D L
Sbjct: 110 DIVGRFCSDLNLNAKIQNTARYIAKKVQDIGCLAGRSPDSIASAIIYLTLCLYPDFLFLQ 169
Query: 361 KDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
KDI + T V + TIRN+YKDL P+ +I P
Sbjct: 170 KDIQYVTNVTDVTIRNTYKDLLPYKKEIIP 199
[158][TOP]
>UniRef100_B7XLJ0 Transcription initiation factor IIB n=1 Tax=Enterocytozoon bieneusi
H348 RepID=B7XLJ0_ENTBH
Length = 311
Score = 57.0 bits (136), Expect = 9e-07
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTL- 362
D + RFCS+L ++ A+ +K ++ RSP SIA+ +IY+ L D L
Sbjct: 208 DIVGRFCSDLNLNAKIQNTARYIAKKVQDIGCLAGRSPDSIASAIIYLTLCLYPDFLFLQ 267
Query: 361 KDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
KDI + T V + TIRN+YKDL P+ +I P
Sbjct: 268 KDIQYVTNVTDVTIRNTYKDLLPYKKEIIP 297
[159][TOP]
>UniRef100_Q2FU09 Transcription initiation factor IIB (TFIIB) n=1
Tax=Methanospirillum hungatei JF-1 RepID=Q2FU09_METHJ
Length = 337
Score = 57.0 bits (136), Expect = 9e-07
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RFCS L + A E ++++ E ++ R P +AA IYI + L +++T +
Sbjct: 248 DYVPRFCSGLQLKGEVQSRAVEILRQAGERELTSGRGPTGVAAAAIYISSILGGERRTQR 307
Query: 358 DISHATGVAEGTIRNSYKDL 299
+++ GV E TIRN YK+L
Sbjct: 308 EVAEVAGVTEVTIRNRYKEL 327
[160][TOP]
>UniRef100_A3MTP4 Transcription initiation factor IIB (TFIIB) n=1 Tax=Pyrobaculum
calidifontis JCM 11548 RepID=A3MTP4_PYRCJ
Length = 331
Score = 57.0 bits (136), Expect = 9e-07
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Frame = -3
Query: 529 FMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLKD 356
++ R L +S A+K A + +QK+++ I + P +AA +YI + + D KT KD
Sbjct: 242 YISRIAEQLKLSGEAIKLAIDILQKAKKAGITAGKDPAGLAAAAVYIASLMLGDNKTQKD 301
Query: 355 ISHATGVAEGTIRNSYKDLYPHLSKIAP 272
+ A GV E T+RN YK+L L+ P
Sbjct: 302 FAVAAGVTEVTVRNRYKELAKALNIKVP 329
[161][TOP]
>UniRef100_A0B5T8 Transcription initiation factor IIB n=1 Tax=Methanosaeta
thermophila PT RepID=TF2B_METTP
Length = 337
Score = 57.0 bits (136), Expect = 9e-07
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RFCS L + E ++++ E ++ R P +AA IYI + L +D++T +
Sbjct: 248 DYIPRFCSGLNLKGDVQAKGIEILRQAAEKELTSGRGPTGVAAAAIYIASILCNDRRTQR 307
Query: 358 DISHATGVAEGTIRNSYKDLYPHLS 284
+++ GV E TIRN YK+L L+
Sbjct: 308 EVADVAGVTEVTIRNRYKELAEELN 332
[162][TOP]
>UniRef100_UPI00005A11DE PREDICTED: similar to general transcription factor IIB isoform 2
n=1 Tax=Canis lupus familiaris RepID=UPI00005A11DE
Length = 273
Score = 56.6 bits (135), Expect = 1e-06
Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Frame = -3
Query: 544 IHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDI--RRSPISIAAVVIYIITQLSDDK 371
I GDFM RFCSNL + AA +K+ E D+ RSPIS+AA IY+ +Q S +K
Sbjct: 209 ITTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEK 268
Query: 370 KTLK 359
+T K
Sbjct: 269 RTQK 272
[163][TOP]
>UniRef100_C3NGJ8 Transcription factor TFIIB cyclin-related n=1 Tax=Sulfolobus
islandicus Y.N.15.51 RepID=C3NGJ8_SULIN
Length = 309
Score = 56.6 bits (135), Expect = 1e-06
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ R + L +S +K A E + K++ + + P +AA IYI + L D+++T K
Sbjct: 219 DYVTRIANLLGLSGAVMKTAAEIIDKAKGSGLTAGKDPAGLAAAAIYIASLLHDERRTQK 278
Query: 358 DISHATGVAEGTIRNSYKDLYPHLSKIAPS 269
+I+ GV E T+RN YK++ L P+
Sbjct: 279 EIAQVAGVTEVTVRNRYKEVTQELKISIPT 308
[164][TOP]
>UniRef100_C7NY62 Transcription factor TFIIB cyclin-related n=1 Tax=Halomicrobium
mukohataei DSM 12286 RepID=C7NY62_HALMD
Length = 324
Score = 56.6 bits (135), Expect = 1e-06
Identities = 27/79 (34%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Frame = -3
Query: 529 FMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLKD 356
++ RFCS L++S+ + A+E ++ + + I +SP+ IAA +Y L+++K T +
Sbjct: 238 YVPRFCSELSLSDETERRARELIEAARDGGILSGKSPVGIAAAAVYAAALLTNEKVTQSE 297
Query: 355 ISHATGVAEGTIRNSYKDL 299
+S ++E TIRN YK+L
Sbjct: 298 VSGVADISEVTIRNRYKEL 316
[165][TOP]
>UniRef100_A3CSQ6 Transcription initiation factor IIB n=1 Tax=Methanoculleus
marisnigri JR1 RepID=TF2B_METMJ
Length = 337
Score = 56.6 bits (135), Expect = 1e-06
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RFCS L + A E ++++ E ++ R P +AA IYI + L +++T +
Sbjct: 248 DYVPRFCSGLNLKGEVQSRAVEILRQAGERELTSGRGPTGVAAAAIYISSILGGERRTQR 307
Query: 358 DISHATGVAEGTIRNSYKDL 299
+++ GV E TIRN YK+L
Sbjct: 308 EVAEVAGVTEVTIRNRYKEL 327
[166][TOP]
>UniRef100_Q8TX21 Transcription initiation factor IIB n=1 Tax=Methanopyrus kandleri
RepID=TF2B_METKA
Length = 307
Score = 56.6 bits (135), Expect = 1e-06
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEE--FDIRRSPISIAAVVIYIITQLSDDKKTLK 359
D + RF S L +S + AQE ++K++E + + P +AA +YI + L +++T K
Sbjct: 218 DHLPRFASKLGVSENVQAKAQEIIEKAKEKGITVGKGPAGVAAAALYIASILEGERRTQK 277
Query: 358 DISHATGVAEGTIRNSYKDL 299
+I+ V E TIRN YK++
Sbjct: 278 EIAEVARVTEVTIRNRYKEI 297
[167][TOP]
>UniRef100_Q75AB1 ADR007Cp n=1 Tax=Eremothecium gossypii RepID=Q75AB1_ASHGO
Length = 354
Score = 56.2 bits (134), Expect = 1e-06
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Frame = -3
Query: 541 HAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKK 368
+A F+ RFCS+L +S AA+ + +++ ++ RSP++IAA IY+ L
Sbjct: 240 NAETFIPRFCSHLGLSVQVANAAEYIAKHAKDINVLAGRSPLTIAASAIYMANLLFRYNI 299
Query: 367 TLKDISHATGVAEGTIRNSYKDLYPHLSKI 278
T IS V EGT++ YK LY H K+
Sbjct: 300 TPSQISATLQVTEGTVKGGYKILYEHKEKV 329
[168][TOP]
>UniRef100_Q46CN8 Transcription initiation factor IIB (TFIIB) n=1 Tax=Methanosarcina
barkeri str. Fusaro RepID=Q46CN8_METBF
Length = 337
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RFCS L + + E ++++ E ++ R P +AA IYI + L +++T +
Sbjct: 248 DYVPRFCSGLNLKGEVQSKSVEILRQASEKELTSGRGPTGVAAAAIYIASILCGERRTQR 307
Query: 358 DISHATGVAEGTIRNSYKDLYPHL 287
+++ GV E TIRN YK+L L
Sbjct: 308 EVADVAGVTEVTIRNRYKELAEEL 331
[169][TOP]
>UniRef100_Q977U3 Transcription initiation factor IIB n=1 Tax=Methanosarcina mazei
RepID=TF2B_METMA
Length = 337
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RFCS L + + E ++++ E ++ R P +AA IYI + L +++T +
Sbjct: 248 DYVPRFCSGLNLKGEVQSKSVEILRQASEKELTSGRGPTGVAAAAIYIASILCGERRTQR 307
Query: 358 DISHATGVAEGTIRNSYKDLYPHL 287
+++ GV E TIRN YK+L L
Sbjct: 308 EVADVAGVTEVTIRNRYKELAEEL 331
[170][TOP]
>UniRef100_Q8TT29 Transcription initiation factor IIB n=1 Tax=Methanosarcina
acetivorans RepID=TF2B_METAC
Length = 337
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RFCS L + + E ++++ E ++ R P +AA IYI + L +++T +
Sbjct: 248 DYVPRFCSGLNLKGEVQSKSVEILRQASEKELTSGRGPTGVAAAAIYIASILCGERRTQR 307
Query: 358 DISHATGVAEGTIRNSYKDLYPHL 287
+++ GV E TIRN YK+L L
Sbjct: 308 EVADVAGVTEVTIRNRYKELAEEL 331
[171][TOP]
>UniRef100_Q12XC2 Transcription initiation factor IIB n=1 Tax=Methanococcoides
burtonii DSM 6242 RepID=Q12XC2_METBU
Length = 337
Score = 55.8 bits (133), Expect = 2e-06
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RFCS L + E ++++ E ++ R P +AA IYI + L +++T +
Sbjct: 248 DYVPRFCSGLNLKGEVQSRGVEILRQASEKELTSGRGPTGVAAAAIYIASILCGERRTQR 307
Query: 358 DISHATGVAEGTIRNSYKDLYPHL 287
+++ GV E TIRN YK+L L
Sbjct: 308 EVADVAGVTEVTIRNRYKELAEEL 331
[172][TOP]
>UniRef100_A4WMA6 Transcription initiation factor IIB n=1 Tax=Pyrobaculum arsenaticum
DSM 13514 RepID=TF2B_PYRAR
Length = 333
Score = 55.8 bits (133), Expect = 2e-06
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Frame = -3
Query: 529 FMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLKD 356
++ R L +S VKAA + +Q++++ I + P +AA +YI + + D +T KD
Sbjct: 244 YISRIAEQLKLSGEVVKAAIDILQRAKKAGITAGKDPAGLAAAAVYIASLMHGDNRTQKD 303
Query: 355 ISHATGVAEGTIRNSYKDLYPHLSKIAP 272
+ A GV E T+RN YK+L L+ P
Sbjct: 304 FAVAAGVTEVTVRNRYKELAKALNIKVP 331
[173][TOP]
>UniRef100_Q9P9I7 Transcription initiation factor IIB n=1 Tax=Methanothermococcus
thermolithotrophicus RepID=TF2B_METTL
Length = 339
Score = 55.8 bits (133), Expect = 2e-06
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RF S L + A +QK+ E + R P +AA IYI + L ++T +
Sbjct: 250 DYVPRFASELKLPGEVESKAISILQKANEKGLTSGRGPTGVAAAAIYIASVLHGTRRTQR 309
Query: 358 DISHATGVAEGTIRNSYKDLYPHL 287
+++ GV E TIRN YK+L HL
Sbjct: 310 EVADVAGVTEVTIRNRYKELTEHL 333
[174][TOP]
>UniRef100_A6UR19 Transcription factor TFIIB cyclin-related n=1 Tax=Methanococcus
vannielii SB RepID=A6UR19_METVS
Length = 339
Score = 55.5 bits (132), Expect = 3e-06
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RF S L + A +QK+ E + R P +AA IYI + L ++T +
Sbjct: 250 DYVPRFASELKLPGEVESKAISILQKAGERGLTSGRGPTGVAAAAIYIASVLQGTRRTQR 309
Query: 358 DISHATGVAEGTIRNSYKDLYPHL 287
+++ GV E TIRN YK+L HL
Sbjct: 310 EVADVAGVTEVTIRNRYKELTEHL 333
[175][TOP]
>UniRef100_B1YCX0 Transcription initiation factor IIB n=1 Tax=Thermoproteus
neutrophilus V24Sta RepID=TF2B_THENV
Length = 333
Score = 55.5 bits (132), Expect = 3e-06
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = -3
Query: 529 FMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLKD 356
++ R L +S VK A + +QK+++ I + P +AA +YI + + D +T KD
Sbjct: 244 YISRIAEQLKLSGEVVKTAIDILQKAKKAGITAGKDPAGLAAAAVYIASLMHGDNRTQKD 303
Query: 355 ISHATGVAEGTIRNSYKDLYPHLSKIAP 272
+ A GV E T+RN YK+L L+ P
Sbjct: 304 FAVAAGVTEVTVRNRYKELAKALNIKVP 331
[176][TOP]
>UniRef100_Q8ZWS3 Transcription initiation factor IIB n=1 Tax=Pyrobaculum aerophilum
RepID=TF2B_PYRAE
Length = 333
Score = 55.5 bits (132), Expect = 3e-06
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = -3
Query: 529 FMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLKD 356
++ R L +S VK A + +QK+++ I + P +AA +YI + + D +T KD
Sbjct: 244 YISRIAEQLKLSGEVVKTAIDILQKAKKAGITAGKDPAGLAAAAVYIASLMHGDNRTQKD 303
Query: 355 ISHATGVAEGTIRNSYKDLYPHLSKIAP 272
+ A GV E T+RN YK+L L+ P
Sbjct: 304 FAVAAGVTEVTVRNRYKELAKALNIKVP 331
[177][TOP]
>UniRef100_O26971 Transcription initiation factor IIB n=1 Tax=Methanothermobacter
thermautotrophicus str. Delta H RepID=TF2B_METTH
Length = 310
Score = 55.5 bits (132), Expect = 3e-06
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RF S L +S A E ++ + E + R P +AA +YI + L + KT +
Sbjct: 221 DYVPRFASELGLSGEVQSKAIEIIEMAMENGLTSGRGPTGVAAAALYIASVLLGEHKTQR 280
Query: 358 DISHATGVAEGTIRNSYKDLYPHL 287
D++ GV E TIRN YK+L L
Sbjct: 281 DVAEVAGVTEVTIRNRYKELTEQL 304
[178][TOP]
>UniRef100_Q6M176 Transcription initiation factor IIB n=1 Tax=Methanococcus
maripaludis RepID=TF2B_METMP
Length = 339
Score = 55.5 bits (132), Expect = 3e-06
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RF S L + A +QK+ E + R P +AA IYI + L ++T +
Sbjct: 250 DYVPRFASELKLPGEVESKAISILQKAGERGLTSGRGPTGVAAAAIYIASVLQGTRRTQR 309
Query: 358 DISHATGVAEGTIRNSYKDLYPHL 287
+++ GV E TIRN YK+L HL
Sbjct: 310 EVADVAGVTEVTIRNRYKELTEHL 333
[179][TOP]
>UniRef100_A6VI28 Transcription initiation factor IIB n=1 Tax=Methanococcus
maripaludis C7 RepID=TF2B_METM7
Length = 339
Score = 55.5 bits (132), Expect = 3e-06
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RF S L + A +QK+ E + R P +AA IYI + L ++T +
Sbjct: 250 DYVPRFASELKLPGEVESKAISILQKAGEKGLTSGRGPTGVAAAAIYIASVLQGTRRTQR 309
Query: 358 DISHATGVAEGTIRNSYKDLYPHL 287
+++ GV E TIRN YK+L HL
Sbjct: 310 EVADVAGVTEVTIRNRYKELTEHL 333
[180][TOP]
>UniRef100_A9A8Q0 Transcription initiation factor IIB n=1 Tax=Methanococcus
maripaludis C6 RepID=TF2B_METM6
Length = 339
Score = 55.5 bits (132), Expect = 3e-06
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RF S L + A +QK+ E + R P +AA IYI + L ++T +
Sbjct: 250 DYVPRFASELKLPGEVESKAISILQKAGEKGLTSGRGPTGVAAAAIYIASVLQGTRRTQR 309
Query: 358 DISHATGVAEGTIRNSYKDLYPHL 287
+++ GV E TIRN YK+L HL
Sbjct: 310 EVADVAGVTEVTIRNRYKELTEHL 333
[181][TOP]
>UniRef100_A4G0F2 Transcription initiation factor IIB n=1 Tax=Methanococcus
maripaludis C5 RepID=TF2B_METM5
Length = 339
Score = 55.5 bits (132), Expect = 3e-06
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RF S L + A +QK+ E + R P +AA IYI + L ++T +
Sbjct: 250 DYVPRFASELKLPGEVESKAISILQKAGEKGLTSSRGPTGVAAAAIYIASVLQGTRRTQR 309
Query: 358 DISHATGVAEGTIRNSYKDLYPHL 287
+++ GV E TIRN YK+L HL
Sbjct: 310 EVADVAGVTEVTIRNRYKELTEHL 333
[182][TOP]
>UniRef100_Q979Q3 Transcription initiation factor IIB 1 n=1 Tax=Thermoplasma
volcanium RepID=TF2B1_THEVO
Length = 312
Score = 55.5 bits (132), Expect = 3e-06
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = -3
Query: 538 AGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKT 365
A D++ RFCS L +S A E ++ +E + + P +AA IYI + ++ +++T
Sbjct: 221 AEDYISRFCSKLKLSMDTRNKALEILRDAENVGLTSGKGPTGVAAAAIYIASLITGERRT 280
Query: 364 LKDISHATGVAEGTIRNSYKDL 299
+ ++ GV E TIRN YK+L
Sbjct: 281 QRAVAEVAGVTEVTIRNRYKEL 302
[183][TOP]
>UniRef100_Q9HJM7 Transcription initiation factor IIB 1 n=1 Tax=Thermoplasma
acidophilum RepID=TF2B1_THEAC
Length = 312
Score = 55.5 bits (132), Expect = 3e-06
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = -3
Query: 538 AGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKT 365
A D++ RFCS L +S A E ++ +E + + P +AA IYI + ++ +++T
Sbjct: 221 AEDYISRFCSKLKLSMDTRNKALEILRSAENAGLTSGKGPTGVAAAAIYIASLMTGERRT 280
Query: 364 LKDISHATGVAEGTIRNSYKDL 299
+ ++ GV E TIRN YK+L
Sbjct: 281 QRAVAEVAGVTEVTIRNRYKEL 302
[184][TOP]
>UniRef100_A3LYP5 Predicted protein n=1 Tax=Pichia stipitis RepID=A3LYP5_PICST
Length = 350
Score = 55.1 bits (131), Expect = 3e-06
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = -3
Query: 538 AGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKT 365
A D +RR CS+L ++ A+ ++ +E + RSP +IAA VIY+ +
Sbjct: 243 AEDLIRRNCSHLGLNAQVTNGAEYIARRCKEVGVLAGRSPTTIAATVIYMAALVFGIDLP 302
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSK-IAPSW 266
IS TGV++GTI+ SYK +Y K I P W
Sbjct: 303 PSKISDKTGVSDGTIKTSYKVMYEEKEKLIDPYW 336
[185][TOP]
>UniRef100_Q18JQ1 Transcription initiation factor TFB n=1 Tax=Haloquadratum walsbyi
DSM 16790 RepID=Q18JQ1_HALWD
Length = 369
Score = 55.1 bits (131), Expect = 3e-06
Identities = 25/80 (31%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
+++ RF S+L + + A+E ++ ++ ++ +SP+ +AA +Y QL++D+ T
Sbjct: 272 EYVPRFASDLEVPKETERTARELLESAKRQNVHSGKSPVGLAAAALYASAQLTNDELTQA 331
Query: 358 DISHATGVAEGTIRNSYKDL 299
D+S T ++E TIRN Y++L
Sbjct: 332 DVSEVTDISEVTIRNRYQEL 351
[186][TOP]
>UniRef100_C5U6X1 Transcription factor TFIIB cyclin-related protein n=1
Tax=Methanocaldococcus infernus ME RepID=C5U6X1_9EURY
Length = 320
Score = 55.1 bits (131), Expect = 3e-06
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RF S L + A + ++K+ E + R P +AA IYI + L ++T +
Sbjct: 231 DYVPRFASELGLPGEVESKAIQILKKAAEKGLTSGRGPTGVAAAAIYIASVLLGHRRTQR 290
Query: 358 DISHATGVAEGTIRNSYKDLYPHL 287
+++ GV E TIRN YK+L HL
Sbjct: 291 EVAEVAGVTEVTIRNRYKELTEHL 314
[187][TOP]
>UniRef100_A6UW60 Transcription initiation factor IIB n=1 Tax=Methanococcus aeolicus
Nankai-3 RepID=TF2B_META3
Length = 334
Score = 55.1 bits (131), Expect = 3e-06
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RF S L + A +QK+ + + R P +AA IYI + L +KT +
Sbjct: 245 DYVPRFASELKLPGEVESKAISILQKAGDKGLTSGRGPTGVAAAAIYIASVLHGTRKTQR 304
Query: 358 DISHATGVAEGTIRNSYKDLYPHL 287
+++ GV E TIRN YK+L HL
Sbjct: 305 EVADVAGVTEVTIRNRYKELTEHL 328
[188][TOP]
>UniRef100_B3T9W7 Putative transcription factor TFIIB repeat protein n=1
Tax=uncultured marine microorganism HF4000_APKG7N23
RepID=B3T9W7_9ZZZZ
Length = 242
Score = 54.7 bits (130), Expect = 4e-06
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Frame = -3
Query: 529 FMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLKD 356
++ RFC L + + AA + ++ E ++ R P +AA IYI + + D +KT K
Sbjct: 154 YIIRFCRELELPGYVESAAINILNQAIEAELTSGRGPTGVAAAAIYIASVVYDQRKTQKT 213
Query: 355 ISHATGVAEGTIRNSYKDLYPHL 287
I+ GV E TIRN YK+L +L
Sbjct: 214 IADTVGVTEVTIRNRYKELAKNL 236
[189][TOP]
>UniRef100_C1EIY3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EIY3_9CHLO
Length = 364
Score = 54.7 bits (130), Expect = 4e-06
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Frame = -3
Query: 520 RFCSNLAMSN-------HAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQL----SDD 374
RFC NL ++N AV A +++ +E + P S+AA I++ Q+ + +
Sbjct: 226 RFCGNLGLANLEFLKLATAVIATFRSLRITEGHTSEKQPASVAAAAIWLCVQIWRGEAAE 285
Query: 373 KKTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 227
+K IS +G+AE TI SY D+YP+ +K+ P Y E + L +P
Sbjct: 286 GIDVKRISEISGMAEATILTSYADMYPYAAKMLPEAYV--ERIPELEAP 332
[190][TOP]
>UniRef100_Q18H61 Transcription initiation factor TFB n=1 Tax=Haloquadratum walsbyi
DSM 16790 RepID=Q18H61_HALWD
Length = 346
Score = 54.7 bits (130), Expect = 4e-06
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Frame = -3
Query: 529 FMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLKD 356
++ RF S+L +S+ + + A+E ++ ++E I +SP+ +AA +Y L+++K T +
Sbjct: 258 YVPRFASDLDLSDESERQARELLRNAKEEAIHSGKSPVGLAAAAVYAAALLTNEKVTQNE 317
Query: 355 ISHATGVAEGTIRNSYKDL 299
+S V+E TIRN YK+L
Sbjct: 318 VSEVANVSEVTIRNRYKEL 336
[191][TOP]
>UniRef100_Q701V6 Putative transcription initiation factor TFIIB n=1 Tax=uncultured
crenarchaeote RepID=Q701V6_9CREN
Length = 304
Score = 54.7 bits (130), Expect = 4e-06
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Frame = -3
Query: 520 RFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLKDISH 347
R S +S + A E ++K+E+ I + P+ +AA +Y+ ++ + KT KD++
Sbjct: 223 RIASKSGLSEKTKRKALEILKKAEQGKISAGKDPMGLAAAALYVACVMNGENKTQKDVAE 282
Query: 346 ATGVAEGTIRNSYKDLYPHL 287
A GV E TIRN YK L HL
Sbjct: 283 AAGVTEVTIRNRYKGLKIHL 302
[192][TOP]
>UniRef100_C1V4B2 Transcription initiation factor IIB (TFIIB) n=1 Tax=Halogeometricum
borinquense DSM 11551 RepID=C1V4B2_9EURY
Length = 343
Score = 54.7 bits (130), Expect = 4e-06
Identities = 25/80 (31%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
+++ RF S++ + + A+E ++ ++ I +SP+ +AA +Y QL+++K T
Sbjct: 245 EYLPRFASDIDVPKETERTARELLENAKTVGIHSGKSPVGLAAAALYAAAQLTNEKVTQS 304
Query: 358 DISHATGVAEGTIRNSYKDL 299
D+S T ++E TIRN Y++L
Sbjct: 305 DVSDVTDISEVTIRNRYQEL 324
[193][TOP]
>UniRef100_B5IV88 TFIIB zinc-binding family n=1 Tax=Thermococcus barophilus MP
RepID=B5IV88_9EURY
Length = 306
Score = 54.7 bits (130), Expect = 4e-06
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RF L +S A + +QK+ + + R P+ +AA +YI + L +KKT +
Sbjct: 217 DYVSRFADQLGLSERTKNRAVKILQKAIKLGLTSGRGPMGVAAAALYIASVLEGEKKTQR 276
Query: 358 DISHATGVAEGTIRNSYKDLYPHLS 284
+++ V E T+RN YK+L L+
Sbjct: 277 EVAEVAHVTEVTVRNRYKELVERLN 301
[194][TOP]
>UniRef100_C6HRH5 Transcription initiation protein n=1 Tax=Ajellomyces capsulatus
H143 RepID=C6HRH5_AJECH
Length = 352
Score = 54.3 bits (129), Expect = 6e-06
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Frame = -3
Query: 532 DFMRRFCSNLAMS---NHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKTL 362
D RFC+ L + + A + V + E RSP+SI A IY+ + L KT
Sbjct: 247 DLCNRFCNLLDLPFQVTNVSSALADRVTSTGEL-AGRSPLSIVAASIYMASFLMGQGKTA 305
Query: 361 KDISHATGVAEGTIRNSYKDLYPHLSKIA-PSWYAK-EEDLKNL 236
K+IS V++GTIR +YK LY ++ P+W + DL+NL
Sbjct: 306 KEISSVAHVSDGTIRGAYKQLYAERERLVDPAWIKDGKGDLRNL 349
[195][TOP]
>UniRef100_C0NUV9 Transcription initiation protein n=1 Tax=Ajellomyces capsulatus
G186AR RepID=C0NUV9_AJECG
Length = 352
Score = 54.3 bits (129), Expect = 6e-06
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Frame = -3
Query: 532 DFMRRFCSNLAMS---NHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKTL 362
D RFC+ L + + A + V + E RSP+SI A IY+ + L KT
Sbjct: 247 DLCNRFCNLLDLPFQVTNVSSALADRVTSTGEL-AGRSPLSIVAASIYMASFLMGQGKTA 305
Query: 361 KDISHATGVAEGTIRNSYKDLYPHLSKIA-PSWYAK-EEDLKNL 236
K+IS V++GTIR +YK LY ++ P+W + DL+NL
Sbjct: 306 KEISSVAHVSDGTIRGAYKQLYAERERLVDPAWIKDGKGDLRNL 349
[196][TOP]
>UniRef100_B8N1Q4 Transcription initiation protein n=2 Tax=Aspergillus
RepID=B8N1Q4_ASPFN
Length = 350
Score = 54.3 bits (129), Expect = 6e-06
Identities = 36/103 (34%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFD--IRRSPISIAAVVIYIITQLSDDKKTLK 359
D RFC+ L + + + RSP+SI A IY+ + L KT K
Sbjct: 245 DLCNRFCNLLDLPFQVTSVSSALSDRVTTMGDLAGRSPLSIVAACIYMASYLMGHGKTAK 304
Query: 358 DISHATGVAEGTIRNSYKDLYPHLSK-IAPSWYAK-EEDLKNL 236
+IS V++GTIR +YK LY + I P W + DLKNL
Sbjct: 305 EISQVAHVSDGTIRGAYKQLYAERERLIDPEWIKDGKGDLKNL 347
[197][TOP]
>UniRef100_A6RGN6 Transcription initiation factor IIB n=1 Tax=Ajellomyces capsulatus
NAm1 RepID=A6RGN6_AJECN
Length = 352
Score = 54.3 bits (129), Expect = 6e-06
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Frame = -3
Query: 532 DFMRRFCSNLAMS---NHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKTL 362
D RFC+ L + + A + V + E RSP+SI A IY+ + L KT
Sbjct: 247 DLCNRFCNLLDLPFQVTNVSSALADRVTSTGEL-AGRSPLSIVAASIYMASFLMGQGKTA 305
Query: 361 KDISHATGVAEGTIRNSYKDLYPHLSK-IAPSWYAK-EEDLKNL 236
K+IS V++GTIR +YK LY + I P+W + DL+NL
Sbjct: 306 KEISSVAHVSDGTIRGAYKQLYAERERLIDPAWIKDGKGDLRNL 349
[198][TOP]
>UniRef100_C9REA0 Transcription factor TFIIB cyclin-releated protein n=1
Tax=Methanocaldococcus vulcanius M7 RepID=C9REA0_9EURY
Length = 666
Score = 54.3 bits (129), Expect = 6e-06
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RF S L + A + +Q++ E + R P +AA IYI + L ++T +
Sbjct: 577 DYVPRFASELGLPGEVESKAIQILQQATEKGLTSGRGPTGVAAAAIYIASVLLGCRRTQR 636
Query: 358 DISHATGVAEGTIRNSYKDLYPHL 287
+++ GV E TIRN YK+L HL
Sbjct: 637 EVAEVAGVTEVTIRNRYKELTEHL 660
[199][TOP]
>UniRef100_C7P8F9 Transcription factor TFIIB cyclin-related n=1
Tax=Methanocaldococcus fervens AG86 RepID=C7P8F9_METFA
Length = 331
Score = 54.3 bits (129), Expect = 6e-06
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RF S L + A + +Q++ E + R P +AA IYI + L ++T +
Sbjct: 242 DYVPRFASELGLPGEVESKAIQILQQAAEKGLTSGRGPTGVAAAAIYIASVLLGCRRTQR 301
Query: 358 DISHATGVAEGTIRNSYKDLYPHL 287
+++ GV E TIRN YK+L HL
Sbjct: 302 EVAEVAGVTEVTIRNRYKELTEHL 325
[200][TOP]
>UniRef100_Q58192 Endonuclease Mja Tfb n=1 Tax=Methanocaldococcus jannaschii
RepID=TF2B_METJA
Length = 673
Score = 54.3 bits (129), Expect = 6e-06
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLK 359
D++ RF S L + A + +Q++ E + R P +AA IYI + L ++T +
Sbjct: 584 DYVPRFASELGLPGEVESKAIQILQQAAEKGLTSGRGPTGVAAAAIYIASVLLGCRRTQR 643
Query: 358 DISHATGVAEGTIRNSYKDLYPHL 287
+++ GV E TIRN YK+L HL
Sbjct: 644 EVAEVAGVTEVTIRNRYKELTEHL 667
[201][TOP]
>UniRef100_Q4N5T9 Transcription initiation factor TFIIB, putative n=1 Tax=Theileria
parva RepID=Q4N5T9_THEPA
Length = 342
Score = 53.9 bits (128), Expect = 7e-06
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Frame = -3
Query: 526 MRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSP---ISIAAVVIYIITQL---SDDKKT 365
M RFCS L +SN + + QKS F + S S+A +IY++T+L D +
Sbjct: 215 MPRFCSRLNLSNEIMTTCEAVAQKS--FVLLTSAHRTTSLAGGIIYLVTRLFFADDSPIS 272
Query: 364 LKDISHATGVAEGTIRNSYKDLYPHLSKIAP 272
+ DIS G + GTI+ +YK+L +L K+ P
Sbjct: 273 ISDISQVCGTSTGTIKTTYKELCLYLDKLIP 303
[202][TOP]
>UniRef100_Q6KZC7 Transcription initiation factor IIB n=1 Tax=Picrophilus torridus
RepID=Q6KZC7_PICTO
Length = 304
Score = 53.9 bits (128), Expect = 7e-06
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 529 FMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLKD 356
++ +FC+ L + + ++E +++ E I + P +AA IYI +S KT K+
Sbjct: 217 YVSQFCNKLNLDKDVIIKSEEIIRRVNETGISAGKGPTGVAAAAIYIAAIISGKPKTQKE 276
Query: 355 ISHATGVAEGTIRNSYKDL 299
IS +GV E TIRN YK++
Sbjct: 277 ISKVSGVTEVTIRNRYKEI 295
[203][TOP]
>UniRef100_A5YS76 Transcription initiation factor TFB n=1 Tax=uncultured haloarchaeon
RepID=A5YS76_9EURY
Length = 331
Score = 53.9 bits (128), Expect = 7e-06
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Frame = -3
Query: 529 FMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLKD 356
++ RF S+L +S+ A + A++ ++ ++E I +SP+ +AA +Y L+++K T +
Sbjct: 243 YVPRFASDLDLSDEAERQARQLLKNAKEAAIHSGKSPVGLAAASVYAAALLTNEKVTQSE 302
Query: 355 ISHATGVAEGTIRNSYKDL 299
+S V+E TIRN YK+L
Sbjct: 303 VSDVANVSEVTIRNRYKEL 321
[204][TOP]
>UniRef100_Q9YGA5 Transcription initiation factor IIB 2 n=1 Tax=Haloferax volcanii
RepID=TFB2_HALVO
Length = 332
Score = 53.9 bits (128), Expect = 7e-06
Identities = 26/79 (32%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Frame = -3
Query: 529 FMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTLKD 356
++ RF S L +S+ A + A++ ++ ++E I +SP+ +AA +Y L+++K T +
Sbjct: 244 YVPRFASELGLSDEAERQARQLLRDAKETGIHSGKSPVGLAAAAVYAAALLTNEKVTQSE 303
Query: 355 ISHATGVAEGTIRNSYKDL 299
+S ++E TIRN YK+L
Sbjct: 304 VSTVADISEVTIRNRYKEL 322
[205][TOP]
>UniRef100_Q7S978 Putative uncharacterized protein n=1 Tax=Neurospora crassa
RepID=Q7S978_NEUCR
Length = 348
Score = 53.5 bits (127), Expect = 1e-05
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Frame = -3
Query: 538 AGDFMRRFCSNLAMSNHAV--KAAQEAVQKSEEFD--IRRSPISIAAVVIYIITQLSDDK 371
A + R+CSNL N A++ K+ RSP+S+AA IY+ + + ++
Sbjct: 240 ATELCARYCSNLNFRNSVAVEDVARQLADKTSTISELAGRSPLSVAAACIYMASHIRNES 299
Query: 370 KTLKDISHATGVAEGTIRNSYKDLYPHLSKI 278
+T K+I+ GV++GT++ +Y+ LY K+
Sbjct: 300 RTSKEIATVAGVSDGTVKTAYRLLYNKKDKL 330
[206][TOP]
>UniRef100_C9SNA0 Transcription initiation factor IIB n=1 Tax=Verticillium albo-atrum
VaMs.102 RepID=C9SNA0_9PEZI
Length = 352
Score = 53.5 bits (127), Expect = 1e-05
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Frame = -3
Query: 541 HAGDFMRRFCSNLA------MSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLS 380
+A D RF S L + N + A++ V SE RSP+S++A IY+ + L
Sbjct: 243 NAEDLCTRFTSQLPFRQSQKIENVSRALARKTVSVSELAG--RSPLSVSAACIYMASHLM 300
Query: 379 DDKKTLKDISHATGVAEGTIRNSYKDLYPHLSK-IAPSWYAKEEDLKNL 236
++ KT KDI+ GV++GTI+ +YK LY + I W ++ + +L
Sbjct: 301 EEPKTSKDIAAVAGVSDGTIKTAYKFLYQARERLIEKEWGVSQKAIDSL 349
[207][TOP]
>UniRef100_B8M4I4 Transcription initiation protein n=1 Tax=Talaromyces stipitatus
ATCC 10500 RepID=B8M4I4_TALSN
Length = 328
Score = 53.5 bits (127), Expect = 1e-05
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Frame = -3
Query: 532 DFMRRFCSNLAMSNHAVKAAQEAVQK-SEEFDIR-RSPISIAAVVIYIITQLSDDKKTLK 359
D RF + L + AA K +++ D+ RSP+SI A IY+I+ L K+ K
Sbjct: 223 DLCERFGTFLGLDYRTWNAAATLSDKVTKDGDLAGRSPLSIVAACIYMISHLCGVPKSAK 282
Query: 358 DISHATGVAEGTIRNSYKDLYPHLSKI 278
+IS+ GV++GTIR +YK LY ++
Sbjct: 283 EISNVVGVSDGTIRGAYKQLYAERDRL 309
[208][TOP]
>UniRef100_B9LP13 Zinc finger TFIIB-type domain protein n=1 Tax=Halorubrum
lacusprofundi ATCC 49239 RepID=B9LP13_HALLT
Length = 333
Score = 53.5 bits (127), Expect = 1e-05
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Frame = -3
Query: 535 GDFMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIR--RSPISIAAVVIYIITQLSDDKKTL 362
G ++ RF S L +S + A+E + ++ I +SP+ +AA +Y LS++K T
Sbjct: 244 GSYVPRFVSRLGLSEETQRVARELLDSAKRAGITSGKSPVGLAASAVYAAALLSNEKVTQ 303
Query: 361 KDISHATGVAEGTIRNSYKDL 299
+S ++E TIRN YK+L
Sbjct: 304 SQVSEVADISEVTIRNRYKEL 324