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[1][TOP]
>UniRef100_Q9LPW9 F13K23.5 protein n=1 Tax=Arabidopsis thaliana RepID=Q9LPW9_ARATH
Length = 775
Score = 339 bits (869), Expect = 7e-92
Identities = 169/169 (100%), Positives = 169/169 (100%)
Frame = +2
Query: 2 PYRNLAAKWKFLAFESWLRRKGVDPSPYRQNLGVIGGQDVTSKSPSPDSSLDSEVATTIN 181
PYRNLAAKWKFLAFESWLRRKGVDPSPYRQNLGVIGGQDVTSKSPSPDSSLDSEVATTIN
Sbjct: 451 PYRNLAAKWKFLAFESWLRRKGVDPSPYRQNLGVIGGQDVTSKSPSPDSSLDSEVATTIN 510
Query: 182 GEVSSDMKLEDLLMVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVE 361
GEVSSDMKLEDLLMVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVE
Sbjct: 511 GEVSSDMKLEDLLMVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVE 570
Query: 362 KKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWDATL 508
KKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWDATL
Sbjct: 571 KKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWDATL 619
[2][TOP]
>UniRef100_Q94AJ9 Putative heat shock factor protein hsf8 n=1 Tax=Arabidopsis
thaliana RepID=Q94AJ9_ARATH
Length = 767
Score = 339 bits (869), Expect = 7e-92
Identities = 169/169 (100%), Positives = 169/169 (100%)
Frame = +2
Query: 2 PYRNLAAKWKFLAFESWLRRKGVDPSPYRQNLGVIGGQDVTSKSPSPDSSLDSEVATTIN 181
PYRNLAAKWKFLAFESWLRRKGVDPSPYRQNLGVIGGQDVTSKSPSPDSSLDSEVATTIN
Sbjct: 451 PYRNLAAKWKFLAFESWLRRKGVDPSPYRQNLGVIGGQDVTSKSPSPDSSLDSEVATTIN 510
Query: 182 GEVSSDMKLEDLLMVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVE 361
GEVSSDMKLEDLLMVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVE
Sbjct: 511 GEVSSDMKLEDLLMVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVE 570
Query: 362 KKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWDATL 508
KKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWDATL
Sbjct: 571 KKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWDATL 619
[3][TOP]
>UniRef100_B9DI42 AT1G12800 protein (Fragment) n=1 Tax=Arabidopsis thaliana
RepID=B9DI42_ARATH
Length = 525
Score = 337 bits (863), Expect = 4e-91
Identities = 168/169 (99%), Positives = 168/169 (99%)
Frame = +2
Query: 2 PYRNLAAKWKFLAFESWLRRKGVDPSPYRQNLGVIGGQDVTSKSPSPDSSLDSEVATTIN 181
PYRNLAAKWKFLAFESWLRRKGVDPSPYRQNLGVIGGQDVTSKSPSPDSSLDSEVATTIN
Sbjct: 209 PYRNLAAKWKFLAFESWLRRKGVDPSPYRQNLGVIGGQDVTSKSPSPDSSLDSEVATTIN 268
Query: 182 GEVSSDMKLEDLLMVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVE 361
GEVSSDMKLEDLLMVYDREKQKFLSSFVGQKIK NVVMANRNSRKLIFSMRPRENEEEVE
Sbjct: 269 GEVSSDMKLEDLLMVYDREKQKFLSSFVGQKIKENVVMANRNSRKLIFSMRPRENEEEVE 328
Query: 362 KKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWDATL 508
KKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWDATL
Sbjct: 329 KKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWDATL 377
[4][TOP]
>UniRef100_UPI0001982C8F PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001982C8F
Length = 773
Score = 250 bits (639), Expect = 3e-65
Identities = 122/169 (72%), Positives = 145/169 (85%)
Frame = +2
Query: 2 PYRNLAAKWKFLAFESWLRRKGVDPSPYRQNLGVIGGQDVTSKSPSPDSSLDSEVATTIN 181
PYRNLAAKWKFLAFESWLRRKG+DPS YRQNLG++G +V + +PSPD++ E+ +
Sbjct: 461 PYRNLAAKWKFLAFESWLRRKGLDPSMYRQNLGIVGSHEVAN-NPSPDANPGPEIHKQLE 519
Query: 182 GEVSSDMKLEDLLMVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVE 361
GE+S +M LEDLL +YD+EK KFLSSFVGQKI VNVVMA+R +R+LIFS RP+E EE VE
Sbjct: 520 GEISPNMNLEDLLRIYDQEKIKFLSSFVGQKINVNVVMADRKTRRLIFSGRPKEKEEMVE 579
Query: 362 KKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWDATL 508
KKR+LMAKL +GD+VKC IKKITYFGIF E+EGVPALVHQ+EVSWDATL
Sbjct: 580 KKRSLMAKLSIGDIVKCRIKKITYFGIFVEVEGVPALVHQTEVSWDATL 628
[5][TOP]
>UniRef100_A7QKJ5 Chromosome chr2 scaffold_112, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QKJ5_VITVI
Length = 761
Score = 250 bits (639), Expect = 3e-65
Identities = 122/169 (72%), Positives = 145/169 (85%)
Frame = +2
Query: 2 PYRNLAAKWKFLAFESWLRRKGVDPSPYRQNLGVIGGQDVTSKSPSPDSSLDSEVATTIN 181
PYRNLAAKWKFLAFESWLRRKG+DPS YRQNLG++G +V + +PSPD++ E+ +
Sbjct: 449 PYRNLAAKWKFLAFESWLRRKGLDPSMYRQNLGIVGSHEVAN-NPSPDANPGPEIHKQLE 507
Query: 182 GEVSSDMKLEDLLMVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVE 361
GE+S +M LEDLL +YD+EK KFLSSFVGQKI VNVVMA+R +R+LIFS RP+E EE VE
Sbjct: 508 GEISPNMNLEDLLRIYDQEKIKFLSSFVGQKINVNVVMADRKTRRLIFSGRPKEKEEMVE 567
Query: 362 KKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWDATL 508
KKR+LMAKL +GD+VKC IKKITYFGIF E+EGVPALVHQ+EVSWDATL
Sbjct: 568 KKRSLMAKLSIGDIVKCRIKKITYFGIFVEVEGVPALVHQTEVSWDATL 616
[6][TOP]
>UniRef100_A5BKU4 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5BKU4_VITVI
Length = 768
Score = 246 bits (629), Expect = 5e-64
Identities = 121/169 (71%), Positives = 143/169 (84%)
Frame = +2
Query: 2 PYRNLAAKWKFLAFESWLRRKGVDPSPYRQNLGVIGGQDVTSKSPSPDSSLDSEVATTIN 181
PYRNLAAKWKFLAFESWLRRKG+DPS YRQNLG++G +V + +PSPD++ E +
Sbjct: 461 PYRNLAAKWKFLAFESWLRRKGLDPSMYRQNLGIVGSHEVAN-NPSPDANPGPEXHKQLE 519
Query: 182 GEVSSDMKLEDLLMVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVE 361
G +S +M LEDLL +YD+EK KFLSSFVGQKI VNVVMA+R +R+LIFS RP+E EE VE
Sbjct: 520 GXISPNMNLEDLLRIYDQEKIKFLSSFVGQKINVNVVMADRKTRRLIFSGRPKEKEEMVE 579
Query: 362 KKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWDATL 508
KKR+LMAKL +GD+VKC IKKITYFGIF E+EGVPALVHQ+EVSWDATL
Sbjct: 580 KKRSLMAKLSIGDIVKCRIKKITYFGIFVEVEGVPALVHQTEVSWDATL 628
[7][TOP]
>UniRef100_B9RC83 Putative uncharacterized protein n=1 Tax=Ricinus communis
RepID=B9RC83_RICCO
Length = 748
Score = 245 bits (626), Expect = 1e-63
Identities = 119/169 (70%), Positives = 143/169 (84%)
Frame = +2
Query: 2 PYRNLAAKWKFLAFESWLRRKGVDPSPYRQNLGVIGGQDVTSKSPSPDSSLDSEVATTIN 181
PYRNL AKWKFLAFESWL++KG+DPS Y+QNLG+IG DV K+ DSS D E+ I
Sbjct: 435 PYRNLVAKWKFLAFESWLKQKGLDPSMYKQNLGIIGSYDVLDKNF--DSSADQEINKKIG 492
Query: 182 GEVSSDMKLEDLLMVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVE 361
GE++ +MKLEDLL +YD+EK KFLSSFVGQKIKVNVV+A++ RKL FS+RP+E EE V+
Sbjct: 493 GEITPNMKLEDLLRIYDQEKLKFLSSFVGQKIKVNVVVADKILRKLTFSLRPKEKEESVQ 552
Query: 362 KKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWDATL 508
+KR LMAKL++GDVVKCCIKKITYFGIF E+EGV AL+HQ+EVSWDATL
Sbjct: 553 RKRNLMAKLQIGDVVKCCIKKITYFGIFVEVEGVAALIHQTEVSWDATL 601
[8][TOP]
>UniRef100_B9GWF8 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GWF8_POPTR
Length = 816
Score = 241 bits (615), Expect = 2e-62
Identities = 118/169 (69%), Positives = 141/169 (83%)
Frame = +2
Query: 2 PYRNLAAKWKFLAFESWLRRKGVDPSPYRQNLGVIGGQDVTSKSPSPDSSLDSEVATTIN 181
PYRNLAA+WKFLAFESWL++KG+DPS Y++NLG+IG +V K+ S DSS+ + I
Sbjct: 446 PYRNLAARWKFLAFESWLKQKGLDPSLYKKNLGIIGSYNVPEKNSSLDSSIVPNMDRKIE 505
Query: 182 GEVSSDMKLEDLLMVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVE 361
E DMKLEDLLM+YD+EK KFLSSFVGQKIKVNVV+A+R RKL+ S+RP+E EE VE
Sbjct: 506 VENKPDMKLEDLLMLYDQEKLKFLSSFVGQKIKVNVVIADRKLRKLVVSLRPKEKEELVE 565
Query: 362 KKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWDATL 508
KKR LMA L++GDVVKCCIKK+TYFGIF E+EGVPAL+H SEVSWDATL
Sbjct: 566 KKRHLMATLQIGDVVKCCIKKVTYFGIFVEVEGVPALIHASEVSWDATL 614
[9][TOP]
>UniRef100_A9PFZ5 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=A9PFZ5_POPTR
Length = 405
Score = 241 bits (615), Expect = 2e-62
Identities = 118/169 (69%), Positives = 141/169 (83%)
Frame = +2
Query: 2 PYRNLAAKWKFLAFESWLRRKGVDPSPYRQNLGVIGGQDVTSKSPSPDSSLDSEVATTIN 181
PYRNLAA+WKFLAFESWL++KG+DPS Y++NLG+IG +V K+ S DSS+ + I
Sbjct: 90 PYRNLAARWKFLAFESWLKQKGLDPSLYKKNLGIIGSYNVPEKNSSLDSSIVPNMDRKIE 149
Query: 182 GEVSSDMKLEDLLMVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVE 361
E DMKLEDLLM+YD+EK KFLSSFVGQKIKVNVV+A+R RKL+ S+RP+E EE VE
Sbjct: 150 VENKPDMKLEDLLMLYDQEKLKFLSSFVGQKIKVNVVIADRKLRKLVVSLRPKEKEELVE 209
Query: 362 KKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWDATL 508
KKR LMA L++GDVVKCCIKK+TYFGIF E+EGVPAL+H SEVSWDATL
Sbjct: 210 KKRHLMATLQIGDVVKCCIKKVTYFGIFVEVEGVPALIHASEVSWDATL 258
[10][TOP]
>UniRef100_C5XSA3 Putative uncharacterized protein Sb04g001123 (Fragment) n=1
Tax=Sorghum bicolor RepID=C5XSA3_SORBI
Length = 792
Score = 208 bits (529), Expect = 2e-52
Identities = 98/169 (57%), Positives = 132/169 (78%)
Frame = +2
Query: 2 PYRNLAAKWKFLAFESWLRRKGVDPSPYRQNLGVIGGQDVTSKSPSPDSSLDSEVATTIN 181
PYRNLA KWKFLAFE+WLRRKG DPS Y+Q+LG+ +V ++ P+SS S++A
Sbjct: 479 PYRNLATKWKFLAFETWLRRKGGDPSLYKQSLGLEDSFEVNERNIEPESSSVSKIAGEDQ 538
Query: 182 GEVSSDMKLEDLLMVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVE 361
SS K EDL+ Y++EK KFLSSF+GQ+++V+VV+A+RNS+++ FSM+P+E+EE ++
Sbjct: 539 ESQSSKPKFEDLIRAYNQEKSKFLSSFIGQRLRVSVVLADRNSKRIFFSMKPKESEEFIQ 598
Query: 362 KKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWDATL 508
KKR LMA+L VGD+V+C IK+ YFGIF E+EGVPAL+ Q EVSWD TL
Sbjct: 599 KKRNLMARLNVGDIVQCAIKRFVYFGIFVEVEGVPALIQQWEVSWDDTL 647
[11][TOP]
>UniRef100_Q6Z7B3 Os02g0115600 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q6Z7B3_ORYSJ
Length = 799
Score = 206 bits (523), Expect = 9e-52
Identities = 97/169 (57%), Positives = 131/169 (77%)
Frame = +2
Query: 2 PYRNLAAKWKFLAFESWLRRKGVDPSPYRQNLGVIGGQDVTSKSPSPDSSLDSEVATTIN 181
PYRNLA KWKFLAFE+WLR+KG DPS ++Q++G+ +V ++ SS DSE+A
Sbjct: 484 PYRNLATKWKFLAFETWLRQKGGDPSLFKQSVGIEESFEVNDRNIESVSSSDSELAVQDQ 543
Query: 182 GEVSSDMKLEDLLMVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVE 361
G + S K EDLL Y+ EK KFLSSF+GQ+++V+VV+A+R S+K+ FSM+P+E+EE ++
Sbjct: 544 GSMPSKEKFEDLLRTYNTEKSKFLSSFIGQRLRVSVVLADRKSKKIFFSMKPKESEELIQ 603
Query: 362 KKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWDATL 508
KK++LMAKL VGD+V+C IK+ YFGIF E+EGVPAL+ Q EVSWD TL
Sbjct: 604 KKKSLMAKLNVGDIVECTIKRFVYFGIFVEVEGVPALIQQWEVSWDETL 652
[12][TOP]
>UniRef100_A9SX28 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SX28_PHYPA
Length = 1098
Score = 99.8 bits (247), Expect = 1e-19
Identities = 62/157 (39%), Positives = 88/157 (56%), Gaps = 3/157 (1%)
Frame = +2
Query: 38 AFESWLRRKGVDPSPYRQNLG-VIGGQDVTSKSPSPDSSLDSEVATTINGEVSSDMKLED 214
A+E RR+ + + Q+ G +I + S + + DSE + I S D + +
Sbjct: 808 AYELSSRRRPPSFTTWAQDNGHIINRKMKLSVASENHPNNDSEDSKEIGRTDSDDEEYKK 867
Query: 215 LLMVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENE--EEVEKKRTLMAKL 388
LL Y+ + L + VG+ KV VV +R ++L FS + E E E EKK LMA L
Sbjct: 868 LLQQYEEARANLLRALVGETAKVVVVAVDRERKQLRFSEKEAEGEGRELAEKKAQLMASL 927
Query: 389 RVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWD 499
VGDVVKC +KK+T FG F EL G+PAL+H SE+SW+
Sbjct: 928 NVGDVVKCTVKKVTSFGAFVELRGIPALIHISELSWN 964
[13][TOP]
>UniRef100_B0VFT2 Putative Ribosomal protein S1 n=1 Tax=Candidatus Cloacamonas
acidaminovorans RepID=B0VFT2_9BACT
Length = 503
Score = 72.4 bits (176), Expect = 2e-11
Identities = 33/81 (40%), Positives = 52/81 (64%)
Frame = +2
Query: 254 SSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITY 433
S F+G+ + V+ + N R+++ S R E E E+K T +AKL+VGD+VK + ++T
Sbjct: 160 SQFIGKTLDFLVIECSENCRRIVVSHRQLEEMREQERKETALAKLKVGDIVKGKVLRMTT 219
Query: 434 FGIFCELEGVPALVHQSEVSW 496
FG F +L G+ L+H SE+SW
Sbjct: 220 FGAFIDLGGIEGLMHVSEISW 240
[14][TOP]
>UniRef100_UPI0001976BF1 30S ribosomal protein S1 n=1 Tax=Bifidobacterium bifidum NCIMB
41171 RepID=UPI0001976BF1
Length = 490
Score = 66.6 bits (161), Expect = 9e-10
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D ++ V + G + D+ L L + + + + LS ++GQKIK ++ +
Sbjct: 118 KIKEADGVVEGTVIEAVKGGLIVDIGLRGFLPASLVEMRRVRDLSPYIGQKIKAKILELD 177
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R E + E + T +++L+ G + + + I FG F +L GV L+H
Sbjct: 178 KNRNNVVLSRRQYLEETQSEVRETFLSQLKKGQIREGVVSSIVNFGAFVDLGGVDGLIHV 237
Query: 482 SEVSW 496
SE+SW
Sbjct: 238 SELSW 242
[15][TOP]
>UniRef100_UPI00018A0392 hypothetical protein BIFGAL_00360 n=1 Tax=Bifidobacterium gallicum
DSM 20093 RepID=UPI00018A0392
Length = 495
Score = 66.6 bits (161), Expect = 9e-10
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D ++ V + G + D+ L L + + + + LS ++GQKIK ++ +
Sbjct: 118 KIKEDDGVVEGTVIEAVKGGLIVDIGLRGFLPASLVEMRRVRDLSPYIGQKIKAKILELD 177
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R E + E + T +++L+ G + + + I FG F +L GV L+H
Sbjct: 178 KNRNNVVLSRRQYLEETQSEVRETFLSQLKKGQIREGVVSSIVNFGAFVDLGGVDGLIHV 237
Query: 482 SEVSW 496
SE+SW
Sbjct: 238 SELSW 242
[16][TOP]
>UniRef100_UPI0000393829 COG0539: Ribosomal protein S1 n=1 Tax=Bifidobacterium longum DJO10A
RepID=UPI0000393829
Length = 484
Score = 66.6 bits (161), Expect = 9e-10
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D ++ V + G + D+ L L + + + + LS ++GQKIK ++ +
Sbjct: 118 KIKEADGVVEGTVIEAVKGGLIVDIGLRGFLPASLVEMRRVRDLSPYIGQKIKAKILELD 177
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R E + E + T +++L+ G + + + I FG F +L GV L+H
Sbjct: 178 KNRNNVVLSRRQYLEETQSEVRETFLSQLKKGQIREGVVSSIVNFGAFVDLGGVDGLIHV 237
Query: 482 SEVSW 496
SE+SW
Sbjct: 238 SELSW 242
[17][TOP]
>UniRef100_B7GSZ9 RNA binding S1 domain protein n=1 Tax=Bifidobacterium longum subsp.
infantis ATCC 15697 RepID=B7GSZ9_BIFLI
Length = 491
Score = 66.6 bits (161), Expect = 9e-10
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D ++ V + G + D+ L L + + + + LS ++GQKIK ++ +
Sbjct: 118 KIKEADGVVEGTVIEAVKGGLIVDIGLRGFLPASLVEMRRVRDLSPYIGQKIKAKILELD 177
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R E + E + T +++L+ G + + + I FG F +L GV L+H
Sbjct: 178 KNRNNVVLSRRQYLEETQSEVRETFLSQLKKGQIREGVVSSIVNFGAFVDLGGVDGLIHV 237
Query: 482 SEVSW 496
SE+SW
Sbjct: 238 SELSW 242
[18][TOP]
>UniRef100_B3DSS2 Ribosomal protein S1 n=2 Tax=Bifidobacterium longum
RepID=B3DSS2_BIFLD
Length = 491
Score = 66.6 bits (161), Expect = 9e-10
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D ++ V + G + D+ L L + + + + LS ++GQKIK ++ +
Sbjct: 118 KIKEADGVVEGTVIEAVKGGLIVDIGLRGFLPASLVEMRRVRDLSPYIGQKIKAKILELD 177
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R E + E + T +++L+ G + + + I FG F +L GV L+H
Sbjct: 178 KNRNNVVLSRRQYLEETQSEVRETFLSQLKKGQIREGVVSSIVNFGAFVDLGGVDGLIHV 237
Query: 482 SEVSW 496
SE+SW
Sbjct: 238 SELSW 242
[19][TOP]
>UniRef100_C2GU84 30S ribosomal protein S1 n=2 Tax=Bifidobacterium longum subsp.
infantis RepID=C2GU84_BIFLO
Length = 491
Score = 66.6 bits (161), Expect = 9e-10
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D ++ V + G + D+ L L + + + + LS ++GQKIK ++ +
Sbjct: 118 KIKEADGVVEGTVIEAVKGGLIVDIGLRGFLPASLVEMRRVRDLSPYIGQKIKAKILELD 177
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R E + E + T +++L+ G + + + I FG F +L GV L+H
Sbjct: 178 KNRNNVVLSRRQYLEETQSEVRETFLSQLKKGQIREGVVSSIVNFGAFVDLGGVDGLIHV 237
Query: 482 SEVSW 496
SE+SW
Sbjct: 238 SELSW 242
[20][TOP]
>UniRef100_B9AUK3 Putative uncharacterized protein n=1 Tax=Bifidobacterium breve DSM
20213 RepID=B9AUK3_BIFBR
Length = 491
Score = 66.6 bits (161), Expect = 9e-10
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D ++ V + G + D+ L L + + + + LS ++GQKIK ++ +
Sbjct: 118 KIKEADGVVEGTVIEAVKGGLIVDIGLRGFLPASLVEMRRVRDLSPYIGQKIKAKILELD 177
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R E + E + T +++L+ G + + + I FG F +L GV L+H
Sbjct: 178 KNRNNVVLSRRQYLEETQSEVRETFLSQLKKGQIREGVVSSIVNFGAFVDLGGVDGLIHV 237
Query: 482 SEVSW 496
SE+SW
Sbjct: 238 SELSW 242
[21][TOP]
>UniRef100_B8DUV1 30S ribosomal protein S1 n=4 Tax=Bifidobacterium animalis subsp.
lactis RepID=B8DUV1_BIFA0
Length = 493
Score = 66.6 bits (161), Expect = 9e-10
Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 2/120 (1%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRK 316
D ++ V + G + D+ L L + + + + LS ++GQKIK V+ ++N
Sbjct: 123 DGVVEGTVIEAVKGGLIVDIGLRGFLPASLVEMRRVRDLSPYIGQKIKAKVLELDKNRNN 182
Query: 317 LIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ S R E + E + T +++L+ G + + + I FG F +L GV L+H SE+SW
Sbjct: 183 VVLSRRQYLEETQSEVRETFLSQLKKGQIREGVVSSIVNFGAFVDLGGVDGLIHVSELSW 242
[22][TOP]
>UniRef100_B1S5G2 Putative uncharacterized protein n=1 Tax=Bifidobacterium dentium
ATCC 27678 RepID=B1S5G2_9BIFI
Length = 490
Score = 66.6 bits (161), Expect = 9e-10
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D ++ V + G + D+ L L + + + + LS ++GQKIK ++ +
Sbjct: 118 KIKEADGVVEGTVIEAVKGGLIVDIGLRGFLPASLVEMRRVRDLSPYIGQKIKAKILELD 177
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R E + E + T +++L+ G + + + I FG F +L GV L+H
Sbjct: 178 KNRNNVVLSRRQYLEETQSEVRETFLSQLKKGQIREGVVSSIVNFGAFVDLGGVDGLIHV 237
Query: 482 SEVSW 496
SE+SW
Sbjct: 238 SELSW 242
[23][TOP]
>UniRef100_A1A172 30S ribosomal protein S1 n=2 Tax=Bifidobacterium adolescentis
RepID=A1A172_BIFAA
Length = 490
Score = 66.6 bits (161), Expect = 9e-10
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D ++ V + G + D+ L L + + + + LS ++GQKIK ++ +
Sbjct: 118 KIKEADGVVEGTVIEAVKGGLIVDIGLRGFLPASLVEMRRVRDLSPYIGQKIKAKILELD 177
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R E + E + T +++L+ G + + + I FG F +L GV L+H
Sbjct: 178 KNRNNVVLSRRQYLEETQSEVRETFLSQLKKGQIREGVVSSIVNFGAFVDLGGVDGLIHV 237
Query: 482 SEVSW 496
SE+SW
Sbjct: 238 SELSW 242
[24][TOP]
>UniRef100_C7LZ55 RNA binding S1 domain protein n=1 Tax=Acidimicrobium ferrooxidans
DSM 10331 RepID=C7LZ55_ACIFD
Length = 427
Score = 66.2 bits (160), Expect = 1e-09
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLLMV--YDREKQKFLSSFVGQKIKVNVVMANRNSRK 316
D + EV + G + D+ L L D + + L+ FVGQ I+ ++ +R
Sbjct: 139 DGVVRGEVIEVVKGGLIVDIGLRGFLPASHVDLRRVRDLAPFVGQDIEAKIIELDRGRNN 198
Query: 317 LIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ S R E + +++ + +R G+V K + I +FG+F +L G+ LVH SE+SW
Sbjct: 199 VVLSRRAYLEENQRDQRERFLTSIRPGEVRKGVVSSIVHFGVFVDLGGMDGLVHVSELSW 258
Query: 497 D 499
+
Sbjct: 259 N 259
[25][TOP]
>UniRef100_C2CVJ8 30S ribosomal protein S1 n=1 Tax=Gardnerella vaginalis ATCC 14019
RepID=C2CVJ8_GARVA
Length = 500
Score = 66.2 bits (160), Expect = 1e-09
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D ++ V + G + D+ L L + + + + LS ++GQKIK ++ +
Sbjct: 118 KIKDADGIVEGTVIEAVKGGLIVDIGLRGFLPASLVEMRRVRDLSPYIGQKIKAKILELD 177
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R E + E + T +++L+ G + + + I FG F +L GV L+H
Sbjct: 178 KNRNNVVLSRRQFLEETQSEVRETFLSQLKKGQIREGVVSSIVNFGAFVDLGGVDGLIHV 237
Query: 482 SEVSW 496
SE+SW
Sbjct: 238 SELSW 242
[26][TOP]
>UniRef100_B9CNP3 30S ribosomal protein S1 n=1 Tax=Atopobium rimae ATCC 49626
RepID=B9CNP3_9ACTN
Length = 441
Score = 66.2 bits (160), Expect = 1e-09
Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Frame = +2
Query: 149 SLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLI 322
+++ EV + G + D+ L L + D + K LS+F+G +I+ V+ +RN ++
Sbjct: 123 TVEGEVIEVVKGGLILDIGLRGFLPASLVDLRRVKDLSTFMGTRIEARVIEMDRNRNNVV 182
Query: 323 FSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWD 499
S R E +++ ++ KL+VG ++ + I FG F +L G+ LVH SE+SW+
Sbjct: 183 LSRRVVLEEARKAERQDILGKLKVGMKLQGTVSSIVEFGAFVDLGGIDGLVHISELSWN 241
[27][TOP]
>UniRef100_Q1AUF7 SSU ribosomal protein S1P n=1 Tax=Rubrobacter xylanophilus DSM 9941
RepID=Q1AUF7_RUBXD
Length = 411
Score = 65.9 bits (159), Expect = 2e-09
Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Frame = +2
Query: 149 SLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLI 322
+++ V + G + D+ L L + D + + L ++G++++ V+ NR+ ++
Sbjct: 128 NVEGPVIEVVKGGLILDIGLRGFLPASLVDIRRVRNLEEYLGRRLECKVIELNRSRNNVV 187
Query: 323 FSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWD 499
S R EE E++ ++ L GD+VK + + FG F +L+G+ L+H SE+SW+
Sbjct: 188 LSRRAVLEEERKEERERILNSLNEGDIVKGTVSNLVDFGAFVDLDGIDGLIHISELSWN 246
[28][TOP]
>UniRef100_C9RDD7 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Ammonifex
degensii KC4 RepID=C9RDD7_9THEO
Length = 654
Score = 65.5 bits (158), Expect = 2e-09
Identities = 30/82 (36%), Positives = 52/82 (63%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
LS+++GQK++ V+ +R+ +K++ S + EE ++R KL+ G VVK +++I
Sbjct: 422 LSTYLGQKVRAKVIELDRSRKKVVLSRKAVLEEEAERRRRETWEKLQEGAVVKGVVRRIV 481
Query: 431 YFGIFCELEGVPALVHQSEVSW 496
FG F +L GV L+H SE++W
Sbjct: 482 PFGAFIDLGGVDGLLHVSEIAW 503
[29][TOP]
>UniRef100_C8W7F1 RNA binding S1 domain protein n=1 Tax=Atopobium parvulum DSM 20469
RepID=C8W7F1_ATOPD
Length = 418
Score = 65.5 bits (158), Expect = 2e-09
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Frame = +2
Query: 149 SLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLI 322
+++ EV + G + D+ L L + D + K L +F+G +I+ V+ +RN ++
Sbjct: 123 TVEGEVIEVVKGGLILDIGLRGFLPASLVDLRRVKDLGAFMGTRIEARVIEMDRNRNNVV 182
Query: 323 FSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWD 499
S R E +++ ++ KL+VG +K + I FG F +L G+ LVH SE+SW+
Sbjct: 183 LSRRIVLEEARKAERQDILGKLQVGMKLKGTVSSIVEFGAFVDLGGIDGLVHISELSWN 241
[30][TOP]
>UniRef100_Q9KCD6 30S ribosomal protein S1 n=1 Tax=Bacillus halodurans
RepID=Q9KCD6_BACHD
Length = 383
Score = 65.1 bits (157), Expect = 3e-09
Identities = 35/116 (30%), Positives = 69/116 (59%), Gaps = 2/116 (1%)
Frame = +2
Query: 152 LDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIF 325
+++EVA + G + D+ + + + +R + S + G+ +++ VV ++ + KLI
Sbjct: 106 IEAEVADVVKGGLVVDLGVRGFIPASLVERHYVEDFSDYKGRTLRLKVVELDKEANKLIL 165
Query: 326 SMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVS 493
S R +EE KK+ ++A L+ GDVV+ ++++T FG F ++ GV LVH S+++
Sbjct: 166 SQRAVLDEEVEAKKKEVLASLQPGDVVEGTVQRLTDFGAFVDVGGVDGLVHISQLA 221
[31][TOP]
>UniRef100_A4J3N5 Hydroxymethylbutenyl pyrophosphate reductase n=1
Tax=Desulfotomaculum reducens MI-1 RepID=A4J3N5_DESRM
Length = 672
Score = 65.1 bits (157), Expect = 3e-09
Identities = 29/82 (35%), Positives = 51/82 (62%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
LS ++ Q+ +V V+ N+ +K++ S + E+ K+ L+A L+ G +VK +++IT
Sbjct: 423 LSKYLNQEFEVRVIEMNKQRKKVVVSRKAVLEEQNARKREELLASLQEGQIVKGIVRRIT 482
Query: 431 YFGIFCELEGVPALVHQSEVSW 496
FG F +L G+ L+H SE+SW
Sbjct: 483 NFGAFVDLGGLDGLLHISEMSW 504
[32][TOP]
>UniRef100_C4FFM4 Putative uncharacterized protein n=1 Tax=Bifidobacterium angulatum
DSM 20098 RepID=C4FFM4_9BIFI
Length = 490
Score = 65.1 bits (157), Expect = 3e-09
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D ++ V + G + D+ L L + + + + LS ++GQKI+ ++ +
Sbjct: 118 KIKEADGVVEGTVIEAVKGGLIVDIGLRGFLPASLVEMRRVRDLSPYIGQKIEAKILELD 177
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R E + E + T +++L+ G + + + I FG F +L GV L+H
Sbjct: 178 KNRNNVVLSRRQYLEETQSEVRETFLSQLKKGQIREGVVSSIVNFGAFVDLGGVDGLIHV 237
Query: 482 SEVSW 496
SE+SW
Sbjct: 238 SELSW 242
[33][TOP]
>UniRef100_C1XRV6 SSU ribosomal protein S1P n=1 Tax=Meiothermus silvanus DSM 9946
RepID=C1XRV6_9DEIN
Length = 598
Score = 64.3 bits (155), Expect = 4e-09
Identities = 31/89 (34%), Positives = 52/89 (58%)
Frame = +2
Query: 230 DREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVK 409
D ++ L +VGQ V ++ NR ++I S R EE+ + L+++L+ DVV+
Sbjct: 201 DLKRTPELDEYVGQSFPVKIIELNRKKGRVILSRRAVVEEEQKSLRAKLLSQLKPDDVVE 260
Query: 410 CCIKKITYFGIFCELEGVPALVHQSEVSW 496
+ ++T FG+F L GV LVH+SE++W
Sbjct: 261 GQVVEVTEFGVFVALGGVDGLVHRSEITW 289
[34][TOP]
>UniRef100_C0BSW0 Putative uncharacterized protein n=1 Tax=Bifidobacterium
pseudocatenulatum DSM 20438 RepID=C0BSW0_9BIFI
Length = 491
Score = 64.3 bits (155), Expect = 4e-09
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D ++ V + G + D+ L L + + + + LS ++GQ IK ++ +
Sbjct: 118 KIKEADGVVEGTVIEAVKGGLIVDIGLRGFLPASLVEMRRVRDLSPYIGQTIKAKILELD 177
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R E + E + T +++L+ G + + + I FG F +L GV L+H
Sbjct: 178 KNRNNVVLSRRQYLEETQSEVRETFLSQLKKGQIREGVVSSIVNFGAFVDLGGVDGLIHV 237
Query: 482 SEVSW 496
SE+SW
Sbjct: 238 SELSW 242
[35][TOP]
>UniRef100_B7DUB2 RNA binding S1 domain protein n=1 Tax=Alicyclobacillus
acidocaldarius LAA1 RepID=B7DUB2_9BACL
Length = 385
Score = 64.3 bits (155), Expect = 4e-09
Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Frame = +2
Query: 152 LDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIF 325
++ E+ + G + +D+ + + + DR + L F GQK++ VV + + KLI
Sbjct: 107 IEVEIRDVVKGGLVADVGVRAFIPASLVDRHFVENLEQFKGQKLRAKVVEVDPHKNKLIL 166
Query: 326 SMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
S R EE + R L +L+ GDV++ ++++T FG F ++ G LVH SE+S+
Sbjct: 167 SRRAVLEEESEARARKLFEELKPGDVIEGTVQRLTDFGAFVDVGGADGLVHISELSF 223
[36][TOP]
>UniRef100_B6XTY7 Putative uncharacterized protein n=1 Tax=Bifidobacterium
catenulatum DSM 16992 RepID=B6XTY7_9BIFI
Length = 491
Score = 64.3 bits (155), Expect = 4e-09
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D ++ V + G + D+ L L + + + + LS ++GQ IK ++ +
Sbjct: 118 KIKEADGVVEGTVIEAVKGGLIVDIGLRGFLPASLVEMRRVRDLSPYIGQTIKAKILELD 177
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R E + E + T +++L+ G + + + I FG F +L GV L+H
Sbjct: 178 KNRNNVVLSRRQYLEETQSEVRETFLSQLKKGQIREGVVSSIVNFGAFVDLGGVDGLIHV 237
Query: 482 SEVSW 496
SE+SW
Sbjct: 238 SELSW 242
[37][TOP]
>UniRef100_B5JH58 Ribosomal protein S1 n=1 Tax=Verrucomicrobiae bacterium DG1235
RepID=B5JH58_9BACT
Length = 549
Score = 64.3 bits (155), Expect = 4e-09
Identities = 30/89 (33%), Positives = 50/89 (56%)
Frame = +2
Query: 230 DREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVK 409
D + K L ++GQ V+ N + ++ S R E+ K+R L+ ++ GDVVK
Sbjct: 128 DIQPPKNLDQYIGQTYDYKVLKINLERKNIVLSRRELIEEQRASKRRDLLERVNPGDVVK 187
Query: 410 CCIKKITYFGIFCELEGVPALVHQSEVSW 496
+K IT FG F +L+G+ L+H +++SW
Sbjct: 188 GVVKNITDFGAFIDLDGMDGLLHITDMSW 216
[38][TOP]
>UniRef100_UPI00019DD834 SSU ribosomal protein S1P n=1 Tax=Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446 RepID=UPI00019DD834
Length = 302
Score = 63.5 bits (153), Expect = 8e-09
Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Frame = +2
Query: 152 LDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIF 325
++ E+ + G + +D+ + + + DR + L F GQK++ V+ + KLI
Sbjct: 24 IEVEIRDVVKGGLVADVGVRAFIPASLVDRHFVENLEQFKGQKLRAKVIEVDPQKNKLIL 83
Query: 326 SMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
S R EE + R L +L+ GDV++ ++++T FG F ++ G LVH SE+S+
Sbjct: 84 SRRAVLEEESEARARKLFEELKPGDVIEGTVQRLTDFGAFVDVGGADGLVHISELSF 140
[39][TOP]
>UniRef100_C8WX93 RNA binding S1 domain protein n=1 Tax=Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446
RepID=C8WX93_ALIAC
Length = 385
Score = 63.5 bits (153), Expect = 8e-09
Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Frame = +2
Query: 152 LDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIF 325
++ E+ + G + +D+ + + + DR + L F GQK++ V+ + KLI
Sbjct: 107 IEVEIRDVVKGGLVADVGVRAFIPASLVDRHFVENLEQFKGQKLRAKVIEVDPQKNKLIL 166
Query: 326 SMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
S R EE + R L +L+ GDV++ ++++T FG F ++ G LVH SE+S+
Sbjct: 167 SRRAVLEEESEARARKLFEELKPGDVIEGTVQRLTDFGAFVDVGGADGLVHISELSF 223
[40][TOP]
>UniRef100_C6J419 RNA binding S1 domain-containing protein n=1 Tax=Paenibacillus sp.
oral taxon 786 str. D14 RepID=C6J419_9BACL
Length = 411
Score = 63.5 bits (153), Expect = 8e-09
Identities = 33/114 (28%), Positives = 66/114 (57%), Gaps = 2/114 (1%)
Frame = +2
Query: 164 VATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRP 337
VA + G + +D+ + + + +R + S + G+ ++V V +R + K+I S +
Sbjct: 123 VADVVKGGIVADVGVRGFIPASMVERHFVEDFSDYKGRTLRVKVKELDRENNKVILSQKD 182
Query: 338 RENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWD 499
+EE K+ +MA+L+ G V++ ++++T FG F ++ GV LVH SE++W+
Sbjct: 183 VLDEEFEANKQKVMAELKEGQVLEGTVQRLTQFGAFVDVGGVDGLVHVSEIAWN 236
[41][TOP]
>UniRef100_A7AYI7 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC
29149 RepID=A7AYI7_RUMGN
Length = 358
Score = 63.5 bits (153), Expect = 8e-09
Identities = 34/85 (40%), Positives = 50/85 (58%)
Frame = +2
Query: 242 QKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIK 421
+K LS + GQ+I+ + N ++I R E EK++ L AKL+VGD V+ +K
Sbjct: 143 EKDLSKYEGQEIEFVISEFNPRRNRVIGDRRQLLVAERAEKQKELFAKLQVGDTVEGTVK 202
Query: 422 KITYFGIFCELEGVPALVHQSEVSW 496
+T FG F +L GV L+H SE+SW
Sbjct: 203 NVTDFGAFIDLGGVDGLLHISEMSW 227
[42][TOP]
>UniRef100_Q2RIU7 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Moorella
thermoacetica ATCC 39073 RepID=Q2RIU7_MOOTA
Length = 736
Score = 63.2 bits (152), Expect = 1e-08
Identities = 33/117 (28%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
Frame = +2
Query: 152 LDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIF 325
+ EV + G + D+ + L + +R + L++++GQ +++ V+ +R+ K++
Sbjct: 455 IQGEVIEVVKGGLLVDVGVRGFLPASLVERGYVEDLNAYLGQTLRLRVIELDRSKNKVVL 514
Query: 326 SMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
S + EE ++++ L VG V K ++++T FG F +L GV L+H SE+SW
Sbjct: 515 SRKAILEEEYEKQRQATWNSLEVGQVRKGIVRRLTNFGAFVDLGGVDGLLHVSEISW 571
[43][TOP]
>UniRef100_B1I3Y7 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Candidatus
Desulforudis audaxviator MP104C RepID=B1I3Y7_DESAP
Length = 677
Score = 63.2 bits (152), Expect = 1e-08
Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Frame = +2
Query: 116 DVTSKSPSPDSSLDSEVATTINGEVSSDMKLEDLLMVYDREKQ--KFLSSFVGQKIKVNV 289
D K+ ++ V + G + D+ + L E+ + LS +VG++I +
Sbjct: 399 DTLDKAFHGGETVRGVVREVVKGGLLVDLGVRSFLPASQVERGYVEDLSQYVGREISARI 458
Query: 290 VMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPA 469
+ N+ +K+I S + EE K++ + + GDVVK ++++T FG F ++ G+
Sbjct: 459 IELNKARKKVILSRKVLLEEEYSRKRKETLETTQEGDVVKGVVRRLTQFGAFVDIGGLDG 518
Query: 470 LVHQSEVSW 496
L+H SE+SW
Sbjct: 519 LLHISEISW 527
[44][TOP]
>UniRef100_A5D1R8 Putative uncharacterized protein n=1 Tax=Pelotomaculum
thermopropionicum SI RepID=A5D1R8_PELTS
Length = 667
Score = 63.2 bits (152), Expect = 1e-08
Identities = 30/82 (36%), Positives = 49/82 (59%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
LS ++GQ +K V+ NR +K+I S + EE ++ + L+ G VVK ++++T
Sbjct: 424 LSKYLGQVVKARVIELNRGRKKVILSRKAVLEEEYARLRQETLDTLQEGQVVKGTVRRLT 483
Query: 431 YFGIFCELEGVPALVHQSEVSW 496
FG F ++ GV L+H SE+SW
Sbjct: 484 QFGAFVDIGGVDGLLHISEMSW 505
[45][TOP]
>UniRef100_C8VZ21 Hydroxymethylbutenyl pyrophosphate reductase n=1
Tax=Desulfotomaculum acetoxidans DSM 771
RepID=C8VZ21_9FIRM
Length = 676
Score = 63.2 bits (152), Expect = 1e-08
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Frame = +2
Query: 152 LDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIF 325
++ V + G + D+ + L + D+ + LS +VG+ I V+ NR RK++
Sbjct: 402 IEGTVREVVKGGLLVDVGVRAFLPASLVDKGYVEDLSKYVGENITAQVIEINRIRRKVVL 461
Query: 326 SMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
S + EE +K L+ L+ G V +++IT FG F ++ GV L+H SE++W
Sbjct: 462 SRKAILEEEYANRKEELLNSLQEGQTVSGIVRRITNFGAFVDIGGVDGLLHISEMAW 518
[46][TOP]
>UniRef100_C4F7M4 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis
DSM 13280 RepID=C4F7M4_9ACTN
Length = 386
Score = 63.2 bits (152), Expect = 1e-08
Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Frame = +2
Query: 149 SLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLI 322
+++ EV + G + D+ L L + D + K L+S++G +I+ V+ +RN ++
Sbjct: 123 NVEGEVIEVVKGGLILDIGLRGFLPASLVDLRRVKDLTSYLGTRIEARVIEMDRNRNNVV 182
Query: 323 FSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWD 499
S R E ++ +++KL+ G +K + I FG F +L G+ L+H SE+SW+
Sbjct: 183 LSRRVVLEESRKAERSEILSKLKSGMRLKGTVSSIVDFGAFVDLGGIDGLIHISELSWN 241
[47][TOP]
>UniRef100_C0UWP5 SSU ribosomal protein S1P n=1 Tax=Thermobaculum terrenum ATCC
BAA-798 RepID=C0UWP5_9BACT
Length = 431
Score = 63.2 bits (152), Expect = 1e-08
Identities = 30/89 (33%), Positives = 49/89 (55%)
Frame = +2
Query: 230 DREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVK 409
D ++Q L++ VG+ ++ V+ NR +LI S R E + K L+ +LR G +VK
Sbjct: 205 DADRQSELANLVGRTLQAKVIEVNRKRNRLILSERIATQERKETSKERLIEELREGQIVK 264
Query: 410 CCIKKITYFGIFCELEGVPALVHQSEVSW 496
+ + FG F ++ G L+H SE+SW
Sbjct: 265 GRVTSLADFGAFVDIGGADGLIHLSEISW 293
[48][TOP]
>UniRef100_B6G9M1 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM
13279 RepID=B6G9M1_9ACTN
Length = 386
Score = 63.2 bits (152), Expect = 1e-08
Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Frame = +2
Query: 149 SLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLI 322
+++ EV + G + D+ L L + D + K L+S++G +I+ V+ +RN ++
Sbjct: 123 NVEGEVIEVVKGGLILDIGLRGFLPASLVDLRRVKDLTSYLGTRIEARVIEMDRNRNNVV 182
Query: 323 FSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWD 499
S R E ++ +++KL+ G +K + I FG F +L G+ L+H SE+SW+
Sbjct: 183 LSRRVVLEESRKAERSEILSKLKSGMRLKGTVSSIVDFGAFVDLGGIDGLIHISELSWN 241
[49][TOP]
>UniRef100_B6FRZ7 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM
1787 RepID=B6FRZ7_9CLOT
Length = 361
Score = 63.2 bits (152), Expect = 1e-08
Identities = 34/85 (40%), Positives = 51/85 (60%)
Frame = +2
Query: 242 QKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIK 421
+K LS + GQ+I+ + N ++I R E+ E ++ L AKL+VGDVV+ +K
Sbjct: 143 EKDLSKYQGQEIEFVISEFNPRRNRVIGDRRQLLVAEKAELQKELFAKLKVGDVVEGTVK 202
Query: 422 KITYFGIFCELEGVPALVHQSEVSW 496
+T FG F +L GV L+H SE+SW
Sbjct: 203 NVTDFGAFIDLGGVDGLLHISEMSW 227
[50][TOP]
>UniRef100_B5CS33 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC
29176 RepID=B5CS33_9FIRM
Length = 362
Score = 63.2 bits (152), Expect = 1e-08
Identities = 34/85 (40%), Positives = 49/85 (57%)
Frame = +2
Query: 242 QKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIK 421
+K LS + GQ+I+ + N ++I R E EK++ L AKL VGD V+ +K
Sbjct: 143 EKDLSKYEGQEIEFVISEFNPRRNRVIGDRRQLLVAERAEKQKELFAKLHVGDTVEGTVK 202
Query: 422 KITYFGIFCELEGVPALVHQSEVSW 496
+T FG F +L GV L+H SE+SW
Sbjct: 203 NVTDFGAFVDLGGVDGLLHISEMSW 227
[51][TOP]
>UniRef100_Q9Z8M3 30S ribosomal protein S1 n=1 Tax=Chlamydophila pneumoniae
RepID=RS1_CHLPN
Length = 580
Score = 63.2 bits (152), Expect = 1e-08
Identities = 32/119 (26%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 146 SSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKL 319
S + ++ + G + D+ +E L D +K K L +VG+ + ++ N R +
Sbjct: 135 SIVKGQITRKVKGGLIVDIGMEAFLPGSQIDNKKIKNLDDYVGKVCEFKILKINVERRNI 194
Query: 320 IFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
+ S R E + KK L+ ++ +G+ K +K IT FG+F +L+G+ L+H ++++W
Sbjct: 195 VVSRRELLEAERISKKAELIEQISIGEYRKGVVKNITDFGVFLDLDGIDGLLHITDMTW 253
[52][TOP]
>UniRef100_C4GBD4 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles
DSM 14600 RepID=C4GBD4_9FIRM
Length = 368
Score = 62.8 bits (151), Expect = 1e-08
Identities = 33/90 (36%), Positives = 55/90 (61%)
Frame = +2
Query: 227 YDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVV 406
Y+R+ K+L GQ+I+ + N R++I + + E + E ++ L+ KL+VGD++
Sbjct: 139 YERDLNKYL----GQEIEFKITEFNPRRRRIIGNRKMILVERKSEIQKDLLEKLKVGDII 194
Query: 407 KCCIKKITYFGIFCELEGVPALVHQSEVSW 496
+ IK IT FG F +L G+ L+H SE+SW
Sbjct: 195 EGTIKNITDFGAFVDLGGIDGLLHISEMSW 224
[53][TOP]
>UniRef100_C0BBM7 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC
27758 RepID=C0BBM7_9FIRM
Length = 359
Score = 62.8 bits (151), Expect = 1e-08
Identities = 33/85 (38%), Positives = 50/85 (58%)
Frame = +2
Query: 242 QKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIK 421
+K LS + Q+I+ + N ++I R E EK++ L AKL+VGDV++ +K
Sbjct: 143 EKDLSKYKDQEIEFVISEFNPRRNRIIGDRRQLLVAERAEKQKELFAKLKVGDVIEGTVK 202
Query: 422 KITYFGIFCELEGVPALVHQSEVSW 496
+T FG F +L GV L+H SE+SW
Sbjct: 203 NVTDFGAFIDLGGVDGLLHISEMSW 227
[54][TOP]
>UniRef100_Q3KMS2 SSU ribosomal protein S1P n=1 Tax=Chlamydia trachomatis A/HAR-13
RepID=Q3KMS2_CHLTA
Length = 569
Score = 62.4 bits (150), Expect = 2e-08
Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Frame = +2
Query: 146 SSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKL 319
S + ++ + G + D+ +E L D +K K L +VG+ + ++ N + R +
Sbjct: 135 SIVKGQITRKVKGGLIVDIGMEAFLPGSQIDNKKIKNLDDYVGKVCEFKILKINVDRRNV 194
Query: 320 IFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
+ S R E + KK L+ ++ +G+ K +K IT FG+F +L+G+ L+H ++++W
Sbjct: 195 VVSRRELLEAERISKKAELIEQITIGERRKGIVKNITDFGVFLDLDGIDGLLHITDMTW 253
[55][TOP]
>UniRef100_B0B9K6 SSU ribosomal protein S1P n=2 Tax=Chlamydia trachomatis
RepID=B0B9K6_CHLT2
Length = 569
Score = 62.4 bits (150), Expect = 2e-08
Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Frame = +2
Query: 146 SSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKL 319
S + ++ + G + D+ +E L D +K K L +VG+ + ++ N + R +
Sbjct: 135 SIVKGQITRKVKGGLIVDIGMEAFLPGSQIDNKKIKNLDDYVGKVCEFKILKINVDRRNV 194
Query: 320 IFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
+ S R E + KK L+ ++ +G+ K +K IT FG+F +L+G+ L+H ++++W
Sbjct: 195 VVSRRELLEAERISKKAELIEQITIGERRKGIVKNITDFGVFLDLDGIDGLLHITDMTW 253
[56][TOP]
>UniRef100_C7H149 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1
Tax=Eubacterium saphenum ATCC 49989 RepID=C7H149_9FIRM
Length = 703
Score = 62.4 bits (150), Expect = 2e-08
Identities = 34/121 (28%), Positives = 65/121 (53%), Gaps = 3/121 (2%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLLMVYDREKQKFL---SSFVGQKIKVNVVMANRNSR 313
D ++ +V + V ++ K + + ++F+ S FVGQ ++ V+ ++
Sbjct: 409 DETVKVDVVRAVKSGVIANYKEVSGFIPLSQLSERFIEDASEFVGQTMEAKVIRVDQKLG 468
Query: 314 KLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVS 493
K IFS + + EE+ ++ + L KL VGD ++ + + T +G F ++ GV L+H SE+S
Sbjct: 469 KAIFSPKQLQKEEKNKRLQELWKKLNVGDDIEGKVMRFTEYGAFVDIGGVDGLLHISEIS 528
Query: 494 W 496
W
Sbjct: 529 W 529
[57][TOP]
>UniRef100_C4PPA8 SSU ribosomal protein S1P n=1 Tax=Chlamydia trachomatis B/Jali20/OT
RepID=C4PPA8_CHLTJ
Length = 569
Score = 62.4 bits (150), Expect = 2e-08
Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Frame = +2
Query: 146 SSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKL 319
S + ++ + G + D+ +E L D +K K L +VG+ + ++ N + R +
Sbjct: 135 SIVKGQITRKVKGGLIVDIGMEAFLPGSQIDNKKIKNLDDYVGKVCEFKILKINVDRRNV 194
Query: 320 IFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
+ S R E + KK L+ ++ +G+ K +K IT FG+F +L+G+ L+H ++++W
Sbjct: 195 VVSRRELLEAERISKKAELIEQITIGERRKGIVKNITDFGVFLDLDGIDGLLHITDMTW 253
[58][TOP]
>UniRef100_C4PLV1 SSU ribosomal protein S1P n=1 Tax=Chlamydia trachomatis
B/TZ1A828/OT RepID=C4PLV1_CHLTZ
Length = 569
Score = 62.4 bits (150), Expect = 2e-08
Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Frame = +2
Query: 146 SSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKL 319
S + ++ + G + D+ +E L D +K K L +VG+ + ++ N + R +
Sbjct: 135 SIVKGQITRKVKGGLIVDIGMEAFLPGSQIDNKKIKNLDDYVGKVCEFKILKINVDRRNV 194
Query: 320 IFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
+ S R E + KK L+ ++ +G+ K +K IT FG+F +L+G+ L+H ++++W
Sbjct: 195 VVSRRELLEAERISKKAELIEQITIGERRKGIVKNITDFGVFLDLDGIDGLLHITDMTW 253
[59][TOP]
>UniRef100_O84100 30S ribosomal protein S1 n=1 Tax=Chlamydia trachomatis
RepID=RS1_CHLTR
Length = 569
Score = 62.4 bits (150), Expect = 2e-08
Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Frame = +2
Query: 146 SSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKL 319
S + ++ + G + D+ +E L D +K K L +VG+ + ++ N + R +
Sbjct: 135 SIVKGQITRKVKGGLIVDIGMEAFLPGSQIDNKKIKNLDDYVGKVCEFKILKINVDRRNV 194
Query: 320 IFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
+ S R E + KK L+ ++ +G+ K +K IT FG+F +L+G+ L+H ++++W
Sbjct: 195 VVSRRELLEAERISKKAELIEQITIGERRKGIVKNITDFGVFLDLDGIDGLLHITDMTW 253
[60][TOP]
>UniRef100_P38016 30S ribosomal protein S1 n=1 Tax=Chlamydia muridarum
RepID=RS1_CHLMU
Length = 570
Score = 62.4 bits (150), Expect = 2e-08
Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Frame = +2
Query: 146 SSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKL 319
S + ++ + G + D+ +E L D +K K L +VG+ + ++ N + R +
Sbjct: 135 SIVKGQITRKVKGGLIVDIGMEAFLPGSQIDNKKIKNLDDYVGKVCEFKILKINVDRRNV 194
Query: 320 IFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
+ S R E + KK L+ ++ +G+ K +K IT FG+F +L+G+ L+H ++++W
Sbjct: 195 VVSRRELLEAERISKKAELIEQITIGERRKGIVKNITDFGVFLDLDGIDGLLHITDMTW 253
[61][TOP]
>UniRef100_Q5L625 30s ribosomal protein S1 n=1 Tax=Chlamydophila abortus
RepID=Q5L625_CHLAB
Length = 581
Score = 62.0 bits (149), Expect = 2e-08
Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Frame = +2
Query: 146 SSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKL 319
S + ++ + G + D+ +E L D +K K L +VG+ + ++ N + R +
Sbjct: 135 SIVKGQIIRKVKGGLIVDIGMEAFLPGSQIDNKKIKNLDDYVGKVCEFKILKINIDRRNV 194
Query: 320 IFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
+ S R E + KK L+ ++ +G+ K +K IT FG+F +L+G+ L+H ++++W
Sbjct: 195 VVSRRELLEAERISKKAELIEQITIGERRKGIVKNITDFGVFLDLDGIDGLLHITDMTW 253
[62][TOP]
>UniRef100_Q254H6 30S ribosomal protein S1 n=1 Tax=Chlamydophila felis Fe/C-56
RepID=Q254H6_CHLFF
Length = 581
Score = 62.0 bits (149), Expect = 2e-08
Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Frame = +2
Query: 146 SSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKL 319
S + ++ + G + D+ +E L D +K K L +VG+ + ++ N + R +
Sbjct: 135 SIVKGQIIRKVKGGLIVDIGMEAFLPGSQIDNKKIKNLDDYVGKVCEFKILKINIDRRNV 194
Query: 320 IFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
+ S R E + KK L+ ++ +G+ K +K IT FG+F +L+G+ L+H ++++W
Sbjct: 195 VVSRRELLEAERISKKAELIEQITIGERRKGVVKNITDFGVFLDLDGIDGLLHITDMTW 253
[63][TOP]
>UniRef100_A9WHZ0 RNA binding S1 domain protein n=2 Tax=Chloroflexus
RepID=A9WHZ0_CHLAA
Length = 399
Score = 62.0 bits (149), Expect = 2e-08
Identities = 32/98 (32%), Positives = 51/98 (52%)
Frame = +2
Query: 203 KLEDLLMVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMA 382
++ + V + +KQ ++ V ++ + V+ NRN +LI S R E KK L+
Sbjct: 165 QVSSISRVSETQKQSEMARLVNVELPLKVIEINRNRNRLILSERQALVETRESKKDELLT 224
Query: 383 KLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
LR GDV + + FG+F ++ G LVH SE+SW
Sbjct: 225 SLREGDVRDGVVSSVCDFGVFVDIGGADGLVHLSEISW 262
[64][TOP]
>UniRef100_A5UU17 SSU ribosomal protein S1P n=1 Tax=Roseiflexus sp. RS-1
RepID=A5UU17_ROSS1
Length = 403
Score = 62.0 bits (149), Expect = 2e-08
Identities = 31/89 (34%), Positives = 49/89 (55%)
Frame = +2
Query: 230 DREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVK 409
D +KQ ++ VGQ + + V+ NRN +LI S R + +K L++ L+ GDV +
Sbjct: 182 DTQKQSEMARMVGQTLMLKVIEINRNRNRLILSERQAAMDMREGRKGELLSALKEGDVRE 241
Query: 410 CCIKKITYFGIFCELEGVPALVHQSEVSW 496
+ + FG F ++ G LVH SE+SW
Sbjct: 242 GIVTSVCDFGAFVDIGGADGLVHLSEISW 270
[65][TOP]
>UniRef100_C1XNJ8 SSU ribosomal protein S1P n=1 Tax=Meiothermus ruber DSM 1279
RepID=C1XNJ8_MEIRU
Length = 558
Score = 62.0 bits (149), Expect = 2e-08
Identities = 30/89 (33%), Positives = 51/89 (57%)
Frame = +2
Query: 230 DREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVK 409
D ++ L +VGQ V ++ NR ++I S R E+ + ++A L+ G+VV+
Sbjct: 160 DLKRTPDLDEYVGQSFLVKIIELNRKKGRIILSRRTVLEAEQKAARSQVLASLKEGEVVE 219
Query: 410 CCIKKITYFGIFCELEGVPALVHQSEVSW 496
+ ++T FG+F L GV LVH+SE++W
Sbjct: 220 GQVVEVTDFGVFVALGGVDGLVHRSEITW 248
[66][TOP]
>UniRef100_C0CI71 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica
DSM 10507 RepID=C0CI71_9FIRM
Length = 368
Score = 62.0 bits (149), Expect = 2e-08
Identities = 31/85 (36%), Positives = 51/85 (60%)
Frame = +2
Query: 242 QKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIK 421
+K LS + Q+I+ + N R++I + + E+ EK++ LMA++ VGD V+ +K
Sbjct: 143 EKDLSKYADQEIEFLITEFNPKRRRIIGNRKQLLLAEKAEKQKELMARISVGDTVEGVVK 202
Query: 422 KITYFGIFCELEGVPALVHQSEVSW 496
+T FG F +L G L+H SE+SW
Sbjct: 203 NVTDFGAFIDLGGADGLLHISEMSW 227
[67][TOP]
>UniRef100_A8VXT0 Type IV pilus assembly PilZ n=1 Tax=Bacillus selenitireducens MLS10
RepID=A8VXT0_9BACI
Length = 339
Score = 62.0 bits (149), Expect = 2e-08
Identities = 34/115 (29%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
Frame = +2
Query: 155 DSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFS 328
++EVA + G + D+ + + + +R + S + G+ +++ VV +R KLI S
Sbjct: 58 EAEVADVVKGGLVVDVGVRGFIPASLVERFYVEDFSEYKGKTLRLKVVELDRERNKLILS 117
Query: 329 MRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVS 493
R +EE + +K+ + + G+VV +++IT FG+F ++ GV LVH S++S
Sbjct: 118 QRAVLDEEALNQKKETLHSISAGEVVSGTVQRITSFGVFVDIGGVDGLVHISQLS 172
[68][TOP]
>UniRef100_A8SMH1 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC
33270 RepID=A8SMH1_9FIRM
Length = 674
Score = 62.0 bits (149), Expect = 2e-08
Identities = 28/85 (32%), Positives = 51/85 (60%)
Frame = +2
Query: 245 KFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKK 424
K + ++G+K++ ++ + +K++ S R E +E EK +KL VGDV++ ++K
Sbjct: 422 KDFTPYIGKKLECAIINIDERKKKIVLSRREVEEKELQEKLDLAWSKLAVGDVLRGTVRK 481
Query: 425 ITYFGIFCELEGVPALVHQSEVSWD 499
+T FG F L V L+H S++SW+
Sbjct: 482 LTDFGAFVNLGDVDGLIHVSDISWN 506
[69][TOP]
>UniRef100_A7NHV1 RNA binding S1 domain protein n=1 Tax=Roseiflexus castenholzii DSM
13941 RepID=A7NHV1_ROSCS
Length = 388
Score = 61.6 bits (148), Expect = 3e-08
Identities = 30/87 (34%), Positives = 50/87 (57%)
Frame = +2
Query: 236 EKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCC 415
E+Q+ L VGQ I + V+ +R+ +L+ S R E +K+ L+ +L+ GD++
Sbjct: 160 ERQQALQRMVGQTIPLKVIEVDRDRNRLVLSERSATQEWRKAQKQRLLTELQPGDILTGR 219
Query: 416 IKKITYFGIFCELEGVPALVHQSEVSW 496
+ ++T FG F +L G L H SE+SW
Sbjct: 220 VNQLTNFGAFIDLGGADGLAHISELSW 246
[70][TOP]
>UniRef100_A5V175 RNA binding S1 domain protein n=1 Tax=Roseiflexus sp. RS-1
RepID=A5V175_ROSS1
Length = 393
Score = 61.6 bits (148), Expect = 3e-08
Identities = 30/87 (34%), Positives = 50/87 (57%)
Frame = +2
Query: 236 EKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCC 415
E+Q+ L VGQ I + V+ +R+ +L+ S R E +K+ L+ +L+ GD++
Sbjct: 160 ERQQALQRMVGQTIPLKVIEVDRDRNRLVLSERSATQEWRKAQKQRLLTELQPGDILTGR 219
Query: 416 IKKITYFGIFCELEGVPALVHQSEVSW 496
+ ++T FG F +L G L H SE+SW
Sbjct: 220 VNQLTNFGAFIDLGGADGLAHISELSW 246
[71][TOP]
>UniRef100_C6JAR4 Putative uncharacterized protein n=1 Tax=Ruminococcus sp.
5_1_39BFAA RepID=C6JAR4_9FIRM
Length = 358
Score = 61.6 bits (148), Expect = 3e-08
Identities = 31/85 (36%), Positives = 50/85 (58%)
Frame = +2
Query: 242 QKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIK 421
+K LS + Q+I+ + N R++I + + E+ EK++ LM K+ VGD V+ +K
Sbjct: 143 EKDLSKYADQEIEFVITEFNPRRRRIIGNRKQLLLAEKAEKQKELMEKIHVGDTVEGTVK 202
Query: 422 KITYFGIFCELEGVPALVHQSEVSW 496
+T FG F +L G L+H SE+SW
Sbjct: 203 NVTDFGAFIDLGGADGLLHISEMSW 227
[72][TOP]
>UniRef100_A4E752 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens
ATCC 25986 RepID=A4E752_9ACTN
Length = 369
Score = 61.6 bits (148), Expect = 3e-08
Identities = 33/119 (27%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Frame = +2
Query: 149 SLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLI 322
+++ EV + G + D+ L L + D + K L+S++G +I+ V+ +RN ++
Sbjct: 104 NVEGEVIEVVKGGLILDIGLRGFLPASLVDLRRVKDLTSYMGTRIEARVIEMDRNRNNVV 163
Query: 323 FSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWD 499
S R E ++ +++KL+ G ++ + I FG F +L G+ L+H SE+SW+
Sbjct: 164 LSRRVVLEESRKAERSEILSKLKSGMRLQGTVSSIVDFGAFVDLGGIDGLIHISELSWN 222
[73][TOP]
>UniRef100_Q83HP3 30s ribosomal protein S1 n=1 Tax=Tropheryma whipplei TW08/27
RepID=Q83HP3_TROW8
Length = 473
Score = 61.2 bits (147), Expect = 4e-08
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D ++ +V + G + D+ L L + D + + LSS++G +I+ V+ +
Sbjct: 111 KIKDSDLTVTGKVIEIVRGGLIVDIGLRGFLPASLIDIRRVRDLSSYLGMEIEAKVLELD 170
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
R ++ S R + + E + +L L G V K + I FG F +L G+ LVH
Sbjct: 171 RQRNNVVLSRRVLLEQNQSEARTSLFGNLHKGQVRKGTVSSIVSFGAFVDLGGIDGLVHI 230
Query: 482 SEVSW 496
SE+SW
Sbjct: 231 SEISW 235
[74][TOP]
>UniRef100_Q83GI6 30S ribosomal protein S1 n=1 Tax=Tropheryma whipplei str. Twist
RepID=Q83GI6_TROWT
Length = 473
Score = 61.2 bits (147), Expect = 4e-08
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D ++ +V + G + D+ L L + D + + LSS++G +I+ V+ +
Sbjct: 111 KIKDSDLTVTGKVIEIVRGGLIVDIGLRGFLPASLIDIRRVRDLSSYLGMEIEAKVLELD 170
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
R ++ S R + + E + +L L G V K + I FG F +L G+ LVH
Sbjct: 171 RQRNNVVLSRRVLLEQNQSEARTSLFGNLHKGQVRKGTVSSIVSFGAFVDLGGIDGLVHI 230
Query: 482 SEVSW 496
SE+SW
Sbjct: 231 SEISW 235
[75][TOP]
>UniRef100_Q823F0 Ribosomal protein S1 n=1 Tax=Chlamydophila caviae
RepID=Q823F0_CHLCV
Length = 581
Score = 61.2 bits (147), Expect = 4e-08
Identities = 31/119 (26%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Frame = +2
Query: 146 SSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKL 319
S + ++ + G + D+ +E L D +K K L +VG+ + ++ N + R +
Sbjct: 135 SIVKGQIIRKVKGGLIVDIGMEAFLPGSQIDNKKIKNLDDYVGKVCEFKILKINIDRRNV 194
Query: 320 IFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
+ S R E + KK L+ ++ +G+ + +K IT FG+F +L+G+ L+H ++++W
Sbjct: 195 VVSRRELLEAERISKKAELIEQINIGERRRGIVKNITDFGVFLDLDGIDGLLHITDMTW 253
[76][TOP]
>UniRef100_Q5WGU6 30S ribosomal protein S1 n=1 Tax=Bacillus clausii KSM-K16
RepID=Q5WGU6_BACSK
Length = 384
Score = 61.2 bits (147), Expect = 4e-08
Identities = 33/116 (28%), Positives = 67/116 (57%), Gaps = 2/116 (1%)
Frame = +2
Query: 152 LDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIF 325
+++EVA + G + D+ + + + +R + S + G+ +++ V ++++ KLI
Sbjct: 106 IEAEVAEVVKGGLVVDVGVRGFIPASLVERHYVEDFSDYKGKPLRLKVTEIDKDNNKLIL 165
Query: 326 SMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVS 493
S R + E EKK+ ++ L GDVV+ ++++T FG F ++ GV LVH S+++
Sbjct: 166 SQRAVLDAEIEEKKKQVLHSLSTGDVVEGKVQRLTSFGAFVDVGGVDGLVHISQIA 221
[77][TOP]
>UniRef100_B9L032 30S ribosomal protein S1 n=1 Tax=Thermomicrobium roseum DSM 5159
RepID=B9L032_THERP
Length = 443
Score = 61.2 bits (147), Expect = 4e-08
Identities = 30/86 (34%), Positives = 48/86 (55%)
Frame = +2
Query: 239 KQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCI 418
KQ ++ VGQ++K+ ++ NR+ +LI S R E+ K L+ LR G+ + +
Sbjct: 173 KQADMARMVGQRLKLKIIEINRHRNRLILSERQAVQEQRDAMKAQLIETLREGETRRGRV 232
Query: 419 KKITYFGIFCELEGVPALVHQSEVSW 496
I FG+F ++ G LVH SE+SW
Sbjct: 233 TSIADFGVFVDIGGADGLVHLSEISW 258
[78][TOP]
>UniRef100_B8G954 RNA binding S1 domain protein n=1 Tax=Chloroflexus aggregans DSM
9485 RepID=B8G954_CHLAD
Length = 400
Score = 61.2 bits (147), Expect = 4e-08
Identities = 31/89 (34%), Positives = 49/89 (55%)
Frame = +2
Query: 230 DREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVK 409
+ +KQ ++ V ++ + V+ NRN +LI S R E KK L+A L+ GDV +
Sbjct: 175 EAQKQSEMARLVNVELPLKVIEINRNRNRLILSERQALVETRETKKDELLASLQEGDVRE 234
Query: 410 CCIKKITYFGIFCELEGVPALVHQSEVSW 496
+ + FG+F ++ G LVH SE+SW
Sbjct: 235 GVVSSVCDFGVFVDIGGADGLVHLSEISW 263
[79][TOP]
>UniRef100_A6TRF8 RNA binding S1 domain protein n=1 Tax=Alkaliphilus metalliredigens
QYMF RepID=A6TRF8_ALKMQ
Length = 383
Score = 61.2 bits (147), Expect = 4e-08
Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Frame = +2
Query: 110 GQDVTSKSPSPDSSLDSEVATTINGEVSSDMKLEDLLMVYDREKQKF---LSSFVGQKIK 280
G + K +S ++S+V ++ G V + + + + ++ L +FVG+
Sbjct: 98 GWEDLEKIHDTESLVESKVVESVKGGVIAIARGIRCFIPASQLSDRYVDDLKTFVGKSFN 157
Query: 281 VNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEG 460
V+ +R K + S + +E EKK + AKL G ++ +K++T FG F ++ G
Sbjct: 158 AKVIEIDRQKNKAVLSRKEVLQQENKEKKADVFAKLEKGMQIRGEVKRLTNFGAFVDIGG 217
Query: 461 VPALVHQSEVSW 496
+ LVH SE+SW
Sbjct: 218 IDGLVHISELSW 229
[80][TOP]
>UniRef100_A5I0Z9 30S ribosomal protein S1 n=1 Tax=Clostridium botulinum A str. Hall
RepID=A5I0Z9_CLOBH
Length = 381
Score = 61.2 bits (147), Expect = 4e-08
Identities = 27/89 (30%), Positives = 52/89 (58%)
Frame = +2
Query: 230 DREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVK 409
D + K L+ F G+ +K ++ ++ RK++ S R + EEE ++K L+ L G ++
Sbjct: 137 DNKYVKDLNVFKGEMVKGRLIELDKQKRKIVLSSRVVKEEEEAKRKEELLNSLEKGQKIE 196
Query: 410 CCIKKITYFGIFCELEGVPALVHQSEVSW 496
++++ FG F ++ G+ LVH S++SW
Sbjct: 197 GVVRRLEKFGAFVDIGGMDGLVHNSQLSW 225
[81][TOP]
>UniRef100_C0AAA0 Ribosomal protein S1 n=1 Tax=Opitutaceae bacterium TAV2
RepID=C0AAA0_9BACT
Length = 555
Score = 61.2 bits (147), Expect = 4e-08
Identities = 29/89 (32%), Positives = 50/89 (56%)
Frame = +2
Query: 230 DREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVK 409
D + K L +VGQ V+ N+ + ++ S R ++ EK+R L+ ++ G V K
Sbjct: 130 DIQPPKNLDQYVGQTYDFKVLKINQERKNIVLSRRELIEQQRSEKRRNLLESIQPGQVRK 189
Query: 410 CCIKKITYFGIFCELEGVPALVHQSEVSW 496
+K IT FG F +L+G+ L+H +++SW
Sbjct: 190 GVVKNITDFGAFIDLDGMDGLLHITDMSW 218
[82][TOP]
>UniRef100_C1FKA4 Ribosomal protein S1 n=2 Tax=Clostridium botulinum
RepID=C1FKA4_CLOBJ
Length = 387
Score = 61.2 bits (147), Expect = 4e-08
Identities = 27/89 (30%), Positives = 52/89 (58%)
Frame = +2
Query: 230 DREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVK 409
D + K L+ F G+ +K ++ ++ RK++ S R + EEE ++K L+ L G ++
Sbjct: 143 DNKYVKDLNVFKGEMVKGRLIELDKQKRKIVLSSRVVKEEEEAKRKEELLNSLEKGQKIE 202
Query: 410 CCIKKITYFGIFCELEGVPALVHQSEVSW 496
++++ FG F ++ G+ LVH S++SW
Sbjct: 203 GVVRRLEKFGAFVDIGGMDGLVHNSQLSW 231
[83][TOP]
>UniRef100_A7G2Q4 Ribosomal protein S1 n=2 Tax=Clostridium botulinum A
RepID=A7G2Q4_CLOBH
Length = 387
Score = 61.2 bits (147), Expect = 4e-08
Identities = 27/89 (30%), Positives = 52/89 (58%)
Frame = +2
Query: 230 DREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVK 409
D + K L+ F G+ +K ++ ++ RK++ S R + EEE ++K L+ L G ++
Sbjct: 143 DNKYVKDLNVFKGEMVKGRLIELDKQKRKIVLSSRVVKEEEEAKRKEELLNSLEKGQKIE 202
Query: 410 CCIKKITYFGIFCELEGVPALVHQSEVSW 496
++++ FG F ++ G+ LVH S++SW
Sbjct: 203 GVVRRLEKFGAFVDIGGMDGLVHNSQLSW 231
[84][TOP]
>UniRef100_UPI00016B22D3 RNA binding S1 domain protein n=1 Tax=candidate division TM7
single-cell isolate TM7c RepID=UPI00016B22D3
Length = 358
Score = 60.8 bits (146), Expect = 5e-08
Identities = 31/83 (37%), Positives = 50/83 (60%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
L++ +G+ +KV ++ A+R S KLIFS + + E+ KL VGD V+ + +
Sbjct: 157 LNNLIGKTMKVRILDADRKSNKLIFSEKEAVKDGLAER----FEKLAVGDQVEGVVTGVV 212
Query: 431 YFGIFCELEGVPALVHQSEVSWD 499
FG+F +EG+ LVH SE+SW+
Sbjct: 213 DFGVFVNVEGIEGLVHISEISWE 235
[85][TOP]
>UniRef100_Q67NT8 30S ribosomal protein S1 n=1 Tax=Symbiobacterium thermophilum
RepID=Q67NT8_SYMTH
Length = 441
Score = 60.8 bits (146), Expect = 5e-08
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Frame = +2
Query: 152 LDSEVATTINGEVSSDMKLEDLLMV--YDREKQKFLSSFVGQKIKVNVVMANRNSRKLIF 325
+++EV + G + D+ L L DR LS FVGQKI+V ++ + ++I
Sbjct: 148 IEAEVTEAVKGGLVVDLGLRAFLPASQVDRGYVADLSKFVGQKIRVKIIELDPYKGRVIL 207
Query: 326 SMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
S + E + + ++ GDV++ +K IT FG F +L GV L+H SE+S+
Sbjct: 208 SRKQVLEAERTAARERFWSTVQEGDVLEGTVKSITDFGAFIDLGGVDGLLHISEMSY 264
[86][TOP]
>UniRef100_A5N6D1 30S ribosomal protein S1 n=2 Tax=Clostridium kluyveri
RepID=A5N6D1_CLOK5
Length = 314
Score = 60.8 bits (146), Expect = 5e-08
Identities = 28/82 (34%), Positives = 49/82 (59%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
L F+G+ +KV ++ +++ K++ S + E E E + L + + GD ++ + +IT
Sbjct: 72 LKEFIGKTLKVKLIQLDKSKNKIVLSGKEVEKLELEEMSKKLWSTISKGDKIEGRVSRIT 131
Query: 431 YFGIFCELEGVPALVHQSEVSW 496
FG+F +L GV LVH SE+SW
Sbjct: 132 NFGVFVDLGGVEGLVHISELSW 153
[87][TOP]
>UniRef100_B1IIV6 Ribosomal protein S1 n=1 Tax=Clostridium botulinum B1 str. Okra
RepID=B1IIV6_CLOBK
Length = 387
Score = 60.8 bits (146), Expect = 5e-08
Identities = 27/89 (30%), Positives = 52/89 (58%)
Frame = +2
Query: 230 DREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVK 409
D + K L+ F G+ +K ++ ++ RK++ S R + EEE ++K L+ L G ++
Sbjct: 143 DNKYVKDLNVFKGEMVKGRLIELDKQKRKVVLSSRVVKEEEEAKRKEELLNSLEKGQKIE 202
Query: 410 CCIKKITYFGIFCELEGVPALVHQSEVSW 496
++++ FG F ++ G+ LVH S++SW
Sbjct: 203 GVVRRLEKFGAFVDIGGMDGLVHNSQLSW 231
[88][TOP]
>UniRef100_A2RLX0 30S ribosomal protein S1 n=3 Tax=Lactococcus lactis
RepID=A2RLX0_LACLM
Length = 408
Score = 60.8 bits (146), Expect = 5e-08
Identities = 28/83 (33%), Positives = 48/83 (57%)
Frame = +2
Query: 245 KFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKK 424
K FVG++I+ ++ N + + I S R E +E ++ A+L+ GD+V+ + +
Sbjct: 145 KDTKKFVGEEIEAKIIEVNASENRFILSRRAVVEAEAIEMRKEAFAQLQEGDIVEGTVSR 204
Query: 425 ITYFGIFCELEGVPALVHQSEVS 493
+T FG F +L G+ LVH SE+S
Sbjct: 205 VTNFGAFVDLGGIDGLVHVSELS 227
[89][TOP]
>UniRef100_C2D7J9 Ribosomal protein S1 n=1 Tax=Atopobium vaginae DSM 15829
RepID=C2D7J9_9ACTN
Length = 409
Score = 60.8 bits (146), Expect = 5e-08
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 149 SLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLI 322
+++ EV + G + D+ L L + D + K LS+++G +I+ V+ +RN ++
Sbjct: 135 NVEGEVIEVVKGGLILDIGLRGFLPASLVDLRRVKDLSAYMGTRIEARVIEMDRNRNNVV 194
Query: 323 FSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWD 499
S R ++ ++ KL+ G +K + I FG F +L G+ L+H SE+SW+
Sbjct: 195 LSRRVVLEAARKAERSEILTKLKPGMKLKGTVSSIVEFGAFVDLGGIDGLIHISELSWN 253
[90][TOP]
>UniRef100_B9XHG4 Ribosomal protein S1 n=1 Tax=bacterium Ellin514 RepID=B9XHG4_9BACT
Length = 553
Score = 60.8 bits (146), Expect = 5e-08
Identities = 32/118 (27%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Frame = +2
Query: 149 SLDSEVATTINGEVSSDMKLEDLLMV--YDREKQKFLSSFVGQKIKVNVVMANRNSRKLI 322
++ +V + G + ++ +E L D K L+S+VG + VV N+ + ++
Sbjct: 101 TITGKVKAVVKGGLLVNIGVEAFLPASQIDITTTKNLASYVGNSYEFKVVKINQERQNIV 160
Query: 323 FSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
S R +E +++ L++++ GD+ K +K IT FG F +L G+ L+H +++SW
Sbjct: 161 LSRRELIEQERNDRRSKLLSEMTPGDIRKGTVKNITDFGAFIDLNGIDGLLHITDMSW 218
[91][TOP]
>UniRef100_B4D371 Ribosomal protein S1 n=1 Tax=Chthoniobacter flavus Ellin428
RepID=B4D371_9BACT
Length = 566
Score = 60.8 bits (146), Expect = 5e-08
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRK 316
D + +V + G ++ ++ +E L D K L FVG +V N + +
Sbjct: 103 DGLIKGKVKAVVKGGLTVNIGVEAFLPGSQIDIVPPKDLQQFVGNTYDFKIVKINDDRKN 162
Query: 317 LIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ S R E EK++ M ++VG VK +K +T FG F +L+G+ L+H ++++W
Sbjct: 163 VVLSRRELIEAERAEKRQRFMDTIKVGSTVKGVVKNLTDFGAFIDLDGMDGLLHITDMTW 222
[92][TOP]
>UniRef100_Q1WTQ3 SSU ribosomal protein S1P n=2 Tax=Lactobacillus salivarius
RepID=Q1WTQ3_LACS1
Length = 399
Score = 60.5 bits (145), Expect = 6e-08
Identities = 30/83 (36%), Positives = 50/83 (60%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
L+ F GQ++++ +V + +LI S + E K++ +M KL GDVV+ + ++T
Sbjct: 153 LNQFKGQELELKIVEIEPSDNRLILSRKELVQAEREAKRQAVMEKLVAGDVVEGKVARLT 212
Query: 431 YFGIFCELEGVPALVHQSEVSWD 499
FG F +L GV LVH SE+S++
Sbjct: 213 NFGAFIDLGGVDGLVHVSEISYE 235
[93][TOP]
>UniRef100_A0LK49 SSU ribosomal protein S1P n=1 Tax=Syntrophobacter fumaroxidans MPOB
RepID=A0LK49_SYNFM
Length = 596
Score = 60.5 bits (145), Expect = 6e-08
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Frame = +2
Query: 116 DVTSKSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNV 289
D S+ + D ++ +V + + G ++ D+ ++ L D + L +GQ V
Sbjct: 126 DDISRIYNEDGIIEGKVVSKVKGGLAVDIGVQAFLPGSQVDLRPVRNLEFLIGQTFPFKV 185
Query: 290 VMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPA 469
+ N+ R ++ S R +E + K +A L G VV+ +K IT +G+F +L G+
Sbjct: 186 LKYNKKRRNVVLSRRALLEKEREQMKSQTLANLEDGKVVEGIVKNITDYGVFVDLGGIDG 245
Query: 470 LVHQSEVSW 496
L+H +++SW
Sbjct: 246 LLHITDMSW 254
[94][TOP]
>UniRef100_C6HV21 Ribosomal protein S1 (Fragment) n=1 Tax=Leptospirillum
ferrodiazotrophum RepID=C6HV21_9BACT
Length = 505
Score = 60.5 bits (145), Expect = 6e-08
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Frame = +2
Query: 152 LDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIF 325
L+ +V + I G ++ D+ L+ L D + + VGQ I+V ++ N+ +I
Sbjct: 87 LEGKVISRIKGGMTVDIGLKAFLPGSQIDLRPVRDMDRLVGQPIQVRIIKMNKKRGNIIV 146
Query: 326 SMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
S R E +K+ M L+ G+V++ +K IT +G F +L GV L+H +++SW
Sbjct: 147 SRRVLLEEWRDRRKKLTMESLKEGEVLEGIVKNITDYGAFIDLGGVDGLLHITDMSW 203
[95][TOP]
>UniRef100_C0GDV0 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Dethiobacter
alkaliphilus AHT 1 RepID=C0GDV0_9FIRM
Length = 678
Score = 60.5 bits (145), Expect = 6e-08
Identities = 28/81 (34%), Positives = 46/81 (56%)
Frame = +2
Query: 254 SSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITY 433
+ F GQ+I ++ KLI S + EE +K ++A+L G ++K +K++T
Sbjct: 434 NEFQGQEISFKIIEMRPEKEKLILSRKQVLEEEAAVQKDKVLAELEPGQIIKGTVKRLTN 493
Query: 434 FGIFCELEGVPALVHQSEVSW 496
FG F ++ G+ LVH SE+SW
Sbjct: 494 FGAFVDVGGIDGLVHISEISW 514
[96][TOP]
>UniRef100_C0FP53 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans
DSM 16841 RepID=C0FP53_9FIRM
Length = 365
Score = 60.5 bits (145), Expect = 6e-08
Identities = 30/85 (35%), Positives = 53/85 (62%)
Frame = +2
Query: 242 QKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIK 421
+K LS + Q+I+ + N R++I + E+++E+++ L AK++VGDV++ +K
Sbjct: 143 EKDLSKYKDQEIQFVISEFNPKRRRIIGDRKQLLVEKKLEQQKELFAKIKVGDVMEGTVK 202
Query: 422 KITYFGIFCELEGVPALVHQSEVSW 496
+T FG F +L G L+H SE+SW
Sbjct: 203 NVTDFGAFIDLGGADGLLHISEMSW 227
[97][TOP]
>UniRef100_C5CBM3 SSU ribosomal protein S1P n=1 Tax=Micrococcus luteus NCTC 2665
RepID=C5CBM3_MICLC
Length = 485
Score = 60.1 bits (144), Expect = 8e-08
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D ++ V + G + D+ L L + + + + L+ ++GQK++ ++ +
Sbjct: 117 KIKEEDGVVEGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLAPYIGQKLEAKIIELD 176
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E + + KL G V + I FG F +L GV LVH
Sbjct: 177 KNRNNVVLSRRAWLEQTQSEVRSNFLHKLEKGQVRNGTVSSIVNFGAFVDLGGVDGLVHV 236
Query: 482 SEVSW 496
SE+SW
Sbjct: 237 SELSW 241
[98][TOP]
>UniRef100_C6PXA3 RNA binding S1 domain protein n=1 Tax=Clostridium carboxidivorans
P7 RepID=C6PXA3_9CLOT
Length = 388
Score = 60.1 bits (144), Expect = 8e-08
Identities = 34/111 (30%), Positives = 60/111 (54%)
Frame = +2
Query: 164 VATTINGEVSSDMKLEDLLMVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRE 343
V T ING + + + L + Y + L SF+G+ + V V+ +++ K++ S + E
Sbjct: 130 VVTYING-IRAFIPASQLSLSYVED----LKSFIGKTLTVKVIEFDKDKEKVVLSRKVIE 184
Query: 344 NEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
E EKK+ L+ ++ G+ + ++ FG F +L GV L+H SE+SW
Sbjct: 185 KAEAEEKKQHLLNSIKPGEKRSGVVSRLAKFGAFVDLGGVDGLIHVSELSW 235
[99][TOP]
>UniRef100_A6BIL2 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM
13814 RepID=A6BIL2_9FIRM
Length = 361
Score = 60.1 bits (144), Expect = 8e-08
Identities = 32/85 (37%), Positives = 49/85 (57%)
Frame = +2
Query: 242 QKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIK 421
+K LS + GQ+I+ + N ++I R E EK++ L AK+ VGD ++ +K
Sbjct: 143 EKDLSKYQGQEIEFVISEFNPRRNRVIGDRRQLLVAERAEKQKELFAKINVGDRMEGTVK 202
Query: 422 KITYFGIFCELEGVPALVHQSEVSW 496
+T FG F +L GV L+H SE+SW
Sbjct: 203 NVTDFGAFIDLGGVDGLLHISEMSW 227
[100][TOP]
>UniRef100_B8H7K0 RNA binding S1 domain protein n=1 Tax=Arthrobacter chlorophenolicus
A6 RepID=B8H7K0_ARTCA
Length = 491
Score = 59.7 bits (143), Expect = 1e-07
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L+ ++GQ+I+ ++ +
Sbjct: 121 KVKEEDGVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLAPYIGQQIEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E + T + KL G V + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRSTFLNKLEKGQVRPGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[101][TOP]
>UniRef100_B8CWY2 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1
Tax=Halothermothrix orenii H 168 RepID=B8CWY2_HALOH
Length = 678
Score = 59.7 bits (143), Expect = 1e-07
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLLMVYDRE--KQKFLSSFVGQKIKVNVVMAN 301
K+ D +++EV + G + D+ L + + LS +VG+ +++ V+
Sbjct: 388 KAYENDEIIEAEVTREVKGGLVVDIGLRGFVHASHVAIGYVEDLSDYVGKTLRLKVIEVE 447
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
R+ ++ S + EE ++K + +L+ G VVK + KI FG F +L G+ L+H
Sbjct: 448 RDKNNVVLSAKKVLEEEREKQKEKTLEELQEGQVVKGKVTKIVDFGAFVDLGGIEGLLHI 507
Query: 482 SEVSW 496
SE+SW
Sbjct: 508 SEMSW 512
[102][TOP]
>UniRef100_A9WT92 SSU ribosomal protein S1P n=1 Tax=Renibacterium salmoninarum ATCC
33209 RepID=A9WT92_RENSM
Length = 504
Score = 59.7 bits (143), Expect = 1e-07
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L+ ++GQ+I+ ++ +
Sbjct: 136 KVQEEDGVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLAPYIGQQIEAKIIELD 195
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E + T + KL G V + I FG F +L GV LVH
Sbjct: 196 KNRNNVVLSRRAWLEQTQSEVRSTFLNKLEKGQVRPGVVSSIVNFGAFVDLGGVDGLVHV 255
Query: 482 SEVSW 496
SE+SW
Sbjct: 256 SELSW 260
[103][TOP]
>UniRef100_A9WF65 RNA binding S1 domain protein n=2 Tax=Chloroflexus
RepID=A9WF65_CHLAA
Length = 391
Score = 59.7 bits (143), Expect = 1e-07
Identities = 30/87 (34%), Positives = 48/87 (55%)
Frame = +2
Query: 236 EKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCC 415
E+Q+ L V Q+I + V+ +R +L+ S R E +K L+ +L+ GDV+
Sbjct: 161 ERQQALQKMVNQEIPLKVIEVDRERNRLVLSERAATQEWRKAQKHRLLTELQPGDVLVGR 220
Query: 416 IKKITYFGIFCELEGVPALVHQSEVSW 496
+ ++T FG F +L G L H SE+SW
Sbjct: 221 VNQLTNFGAFIDLGGADGLAHISELSW 247
[104][TOP]
>UniRef100_A7NKT3 RNA binding S1 domain protein n=1 Tax=Roseiflexus castenholzii DSM
13941 RepID=A7NKT3_ROSCS
Length = 411
Score = 59.7 bits (143), Expect = 1e-07
Identities = 30/89 (33%), Positives = 49/89 (55%)
Frame = +2
Query: 230 DREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVK 409
+ +KQ ++ VGQ + + V+ NRN +LI S R + +K L++ L+ GDV +
Sbjct: 180 EAQKQSEMARMVGQTLALKVIEINRNRNRLILSERQAAMDVREGRKGELLSALKEGDVRE 239
Query: 410 CCIKKITYFGIFCELEGVPALVHQSEVSW 496
+ + FG F ++ G LVH SE+SW
Sbjct: 240 GVVTSVCDFGAFVDIGGADGLVHLSELSW 268
[105][TOP]
>UniRef100_A5CRU5 30S ribosomal protein S1 n=2 Tax=Clavibacter michiganensis
RepID=A5CRU5_CLAM3
Length = 484
Score = 59.7 bits (143), Expect = 1e-07
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L+ ++GQ+I+ ++ +
Sbjct: 120 KIKESDGVVTGTVIEVVKGGLIVDIGLRGFLPASLIELRRVRDLTPYLGQEIEAKILELD 179
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E + T + L+ G V K + I FG F +L GV LVH
Sbjct: 180 KNRNNVVLSRRALLEQTQSESRSTFLNNLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHV 239
Query: 482 SEVSW 496
SE+SW
Sbjct: 240 SELSW 244
[106][TOP]
>UniRef100_A1R6F0 Ribosomal protein S1 n=1 Tax=Arthrobacter aurescens TC1
RepID=A1R6F0_ARTAT
Length = 491
Score = 59.7 bits (143), Expect = 1e-07
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L+ ++GQ+I+ ++ +
Sbjct: 121 KVKEEDGVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLAPYIGQQIEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E + T + KL G V + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRSTFLNKLEKGQVRPGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[107][TOP]
>UniRef100_A0JWM5 SSU ribosomal protein S1P n=1 Tax=Arthrobacter sp. FB24
RepID=A0JWM5_ARTS2
Length = 491
Score = 59.7 bits (143), Expect = 1e-07
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L+ ++GQ+I+ ++ +
Sbjct: 121 KVKEEDGVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLAPYIGQQIEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E + T + KL G V + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRSTFLNKLEKGQVRPGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[108][TOP]
>UniRef100_UPI0001789ABF RNA binding S1 domain protein n=1 Tax=Geobacillus sp. Y412MC10
RepID=UPI0001789ABF
Length = 405
Score = 59.3 bits (142), Expect = 1e-07
Identities = 32/113 (28%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Frame = +2
Query: 164 VATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRP 337
VA + G + +D+ + + +R + S + G+ ++V V +R + K+I S +
Sbjct: 120 VADVVKGGLVADVGARGFIPASMVERHFVEDFSDYKGRTLRVKVKELDRENNKVILSQKD 179
Query: 338 RENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
EE K+ +M++L+ G V++ ++++T FG F ++ GV LVH SE++W
Sbjct: 180 VLEEEFEANKQKVMSELQDGQVLEGTVQRLTQFGAFVDVGGVDGLVHVSEIAW 232
[109][TOP]
>UniRef100_Q24V98 Putative uncharacterized protein n=1 Tax=Desulfitobacterium
hafniense Y51 RepID=Q24V98_DESHY
Length = 661
Score = 59.3 bits (142), Expect = 1e-07
Identities = 27/82 (32%), Positives = 50/82 (60%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
L+ F GQ +++ V+ + R+++ S + EE+ KK L+A L+ GDVV +K++
Sbjct: 423 LNQFKGQTLRLRVIEFDPAKRRVVLSQKEILQEEQAAKKEHLLATLQEGDVVSGVVKRLA 482
Query: 431 YFGIFCELEGVPALVHQSEVSW 496
FG F ++ GV L+H S++++
Sbjct: 483 QFGAFVDIGGVDGLLHVSDIAY 504
[110][TOP]
>UniRef100_Q03SA2 SSU ribosomal protein S1P n=1 Tax=Lactobacillus brevis ATCC 367
RepID=Q03SA2_LACBA
Length = 434
Score = 59.3 bits (142), Expect = 1e-07
Identities = 30/83 (36%), Positives = 48/83 (57%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
L+ F GQ ++ +V + +LI S R ++ +K +MAKL GDVV + ++T
Sbjct: 158 LAQFKGQTLEFKIVEIEPSENRLILSHRAIVEKQRAAQKEEIMAKLTAGDVVDGKVARLT 217
Query: 431 YFGIFCELEGVPALVHQSEVSWD 499
FG F +L GV LVH SE++++
Sbjct: 218 NFGAFVDLGGVDGLVHVSEIAFE 240
[111][TOP]
>UniRef100_C0ZCB1 30S ribosomal protein S1 homolog n=1 Tax=Brevibacillus brevis NBRC
100599 RepID=C0ZCB1_BREBN
Length = 389
Score = 59.3 bits (142), Expect = 1e-07
Identities = 30/118 (25%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Frame = +2
Query: 152 LDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIF 325
+++ V + G + D+ + + + +R + S + G+ + + VV ++ K+I
Sbjct: 107 IEAAVKEVVKGGLVVDVGVRGFIPASMVERHFVEDFSDYKGKTLALKVVEMDKEKNKVIL 166
Query: 326 SMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWD 499
S + +E +K+++M K++VG V++ ++++T FG+F ++ GV LVH SE++W+
Sbjct: 167 SHKAVLEDEVKVQKQSIMDKIQVGQVLEGTVQRMTDFGVFVDIGGVDGLVHVSELAWN 224
[112][TOP]
>UniRef100_B8G2Q3 Hydroxymethylbutenyl pyrophosphate reductase n=1
Tax=Desulfitobacterium hafniense DCB-2
RepID=B8G2Q3_DESHD
Length = 661
Score = 59.3 bits (142), Expect = 1e-07
Identities = 27/82 (32%), Positives = 50/82 (60%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
L+ F GQ +++ V+ + R+++ S + EE+ KK L+A L+ GDVV +K++
Sbjct: 423 LNQFKGQTLRLRVIEFDPAKRRVVLSQKEILQEEQAAKKEHLLATLQEGDVVSGVVKRLA 482
Query: 431 YFGIFCELEGVPALVHQSEVSW 496
FG F ++ GV L+H S++++
Sbjct: 483 QFGAFVDIGGVDGLLHVSDIAY 504
[113][TOP]
>UniRef100_A0LTV1 SSU ribosomal protein S1P n=1 Tax=Acidothermus cellulolyticus 11B
RepID=A0LTV1_ACIC1
Length = 515
Score = 59.3 bits (142), Expect = 1e-07
Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRK 316
D + V + G + D+ L L + + + + L+ +VG+K++ ++ ++N
Sbjct: 132 DGVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLAPYVGRKLEAKIIELDKNRNN 191
Query: 317 LIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ S R + + E ++T + L+ G + + I FG F +L GV LVH SE+SW
Sbjct: 192 VVLSRRAYLEQTQSEVRQTFLTTLKKGQIRNGVVSSIVNFGAFVDLGGVDGLVHVSELSW 251
[114][TOP]
>UniRef100_C8WLL5 RNA binding S1 domain protein n=1 Tax=Eggerthella lenta DSM 2243
RepID=C8WLL5_9ACTN
Length = 405
Score = 59.3 bits (142), Expect = 1e-07
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Frame = +2
Query: 161 EVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMR 334
EV + G + D+ L L + D + K L ++G +I+ V+ +RN ++ S R
Sbjct: 127 EVIEVVKGGLILDIGLRGFLPASLVDLRRVKDLDMYLGTEIEARVIEMDRNRNNVVLSRR 186
Query: 335 PRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWD 499
E ++ ++AKL G +K + I FG F +L G+ LVH SE+SW+
Sbjct: 187 VLLEEGRKNERAEILAKLSKGMRLKGTVSSIVDFGAFVDLGGIDGLVHISELSWN 241
[115][TOP]
>UniRef100_C1WV33 SSU ribosomal protein S1P n=1 Tax=Kribbella flavida DSM 17836
RepID=C1WV33_9ACTO
Length = 492
Score = 59.3 bits (142), Expect = 1e-07
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VGQ+I+ ++ +
Sbjct: 126 KIKEEDGVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGQEIEAKIIELD 185
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E + + +L+ G + K + I FG F +L GV LVH
Sbjct: 186 KNRNNVVLSRRAWLEQTQSEVRMNFLTQLQKGQIRKGVVSSIVNFGAFVDLGGVDGLVHV 245
Query: 482 SEVSW 496
SE+SW
Sbjct: 246 SELSW 250
[116][TOP]
>UniRef100_A5ZQC6 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC
29174 RepID=A5ZQC6_9FIRM
Length = 359
Score = 59.3 bits (142), Expect = 1e-07
Identities = 30/85 (35%), Positives = 49/85 (57%)
Frame = +2
Query: 242 QKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIK 421
+K LS + ++I+ + N R++I + + E+ EK++ LM K+ VGD V +K
Sbjct: 143 EKDLSKYADKEIEFVITEFNPRRRRIIGNRKQLLLAEKAEKQKELMEKIHVGDTVTGTVK 202
Query: 422 KITYFGIFCELEGVPALVHQSEVSW 496
+T FG F +L G L+H SE+SW
Sbjct: 203 NVTDFGAFIDLGGADGLLHISEMSW 227
[117][TOP]
>UniRef100_A5KLC2 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC
27756 RepID=A5KLC2_9FIRM
Length = 367
Score = 59.3 bits (142), Expect = 1e-07
Identities = 33/85 (38%), Positives = 48/85 (56%)
Frame = +2
Query: 242 QKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIK 421
+K L + GQ+I+ + N ++I R E EK++ L A+L+VGD V IK
Sbjct: 143 EKDLGKYEGQEIEFVISEFNPRRNRVIGDRRQLLVAERAEKQKELFARLQVGDRVDGVIK 202
Query: 422 KITYFGIFCELEGVPALVHQSEVSW 496
+T FG F +L GV L+H SE+SW
Sbjct: 203 NVTDFGAFVDLGGVDGLLHISEMSW 227
[118][TOP]
>UniRef100_Q72PM2 30S ribosomal protein S1 n=2 Tax=Leptospira interrogans
RepID=Q72PM2_LEPIC
Length = 560
Score = 58.9 bits (141), Expect = 2e-07
Identities = 27/80 (33%), Positives = 48/80 (60%)
Frame = +2
Query: 257 SFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYF 436
+F ++++ ++ N +R + S + +E EK L+ KL+VGD VK + KI F
Sbjct: 151 TFKNKELEFKIIELNDRTRSGVVSRKKLLDEVNEEKWDALLLKLKVGDKVKAIVSKIASF 210
Query: 437 GIFCELEGVPALVHQSEVSW 496
G+FCE++GV L+ Q ++S+
Sbjct: 211 GVFCEVDGVTGLLRQRDISY 230
[119][TOP]
>UniRef100_Q6A9N2 30S ribosomal protein S1 n=1 Tax=Propionibacterium acnes
RepID=Q6A9N2_PROAC
Length = 498
Score = 58.9 bits (141), Expect = 2e-07
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRK 316
D + V + G + D+ L L + + + + L +VGQ+I+ ++ ++N
Sbjct: 140 DGVVTGTVIEVVKGGLIVDIGLRGFLPASLVEMRRVRDLQPYVGQEIEAKIIELDKNRNN 199
Query: 317 LIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ S R + + E ++ + +L+ G + K + I FG F +L GV LVH SE+SW
Sbjct: 200 VVLSRRAWLEQTQSEVRQNFLHQLQKGQIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSW 259
[120][TOP]
>UniRef100_Q2LSR9 SSU ribosomal protein S1P n=1 Tax=Syntrophus aciditrophicus SB
RepID=Q2LSR9_SYNAS
Length = 586
Score = 58.9 bits (141), Expect = 2e-07
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Frame = +2
Query: 164 VATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRP 337
+ + G +S D+ + L D + L +VGQ + +V+ +R ++ S R
Sbjct: 137 IVERVKGGLSVDIGISAFLPGSQVDIRPVRDLDKYVGQTLMFDVLKYDRKRNNVVLSRRS 196
Query: 338 -RENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
E E EVEK+ TL A + G VV+ IK IT +G+F +L G+ L+H +++SW
Sbjct: 197 ILEQEREVEKQETL-ANISEGVVVEGIIKNITDYGLFIDLGGIDGLLHVTDISW 249
[121][TOP]
>UniRef100_A7GCJ6 Putative 30S ribosomal protein S1 n=1 Tax=Clostridium botulinum F
str. Langeland RepID=A7GCJ6_CLOBL
Length = 387
Score = 58.9 bits (141), Expect = 2e-07
Identities = 26/89 (29%), Positives = 52/89 (58%)
Frame = +2
Query: 230 DREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVK 409
D + K L+ F G+ ++ ++ ++ RK++ S R + EEE ++K L+ L G ++
Sbjct: 143 DNKYVKDLNVFKGEIVRGRLIELDKQKRKVVLSSRVVKEEEEAKRKEELLNSLEKGQKIE 202
Query: 410 CCIKKITYFGIFCELEGVPALVHQSEVSW 496
++++ FG F ++ G+ LVH S++SW
Sbjct: 203 GVVRRLEKFGAFVDIGGMDGLVHNSQLSW 231
[122][TOP]
>UniRef100_C2E8P6 30S ribosomal protein S1 n=1 Tax=Lactobacillus ruminis ATCC 25644
RepID=C2E8P6_9LACO
Length = 395
Score = 58.9 bits (141), Expect = 2e-07
Identities = 29/83 (34%), Positives = 51/83 (61%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
L+ + GQ++++ +V + +LI S + +E K+ ++ KL VGDVV+ + ++T
Sbjct: 149 LNQYKGQELELKIVELEPSENRLILSHKEIVQQEREANKKAVLDKLVVGDVVEGKVARLT 208
Query: 431 YFGIFCELEGVPALVHQSEVSWD 499
FG F +L GV LVH SE+S++
Sbjct: 209 NFGAFIDLGGVDGLVHVSEISFE 231
[123][TOP]
>UniRef100_B0G5T5 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC
27755 RepID=B0G5T5_9FIRM
Length = 359
Score = 58.9 bits (141), Expect = 2e-07
Identities = 32/85 (37%), Positives = 48/85 (56%)
Frame = +2
Query: 242 QKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIK 421
+K LS + Q+I+ + N ++I R E+ EK++ L KL VGD V+ +K
Sbjct: 143 EKDLSKYQDQEIEFVISEFNPRRNRVIGDRRQLLVAEKAEKQKELFEKLHVGDTVEGVVK 202
Query: 422 KITYFGIFCELEGVPALVHQSEVSW 496
+T FG F +L GV L+H SE+SW
Sbjct: 203 NVTDFGAFIDLGGVDGLLHISEMSW 227
[124][TOP]
>UniRef100_Q894M2 SSU ribosomal protein S1P n=1 Tax=Clostridium tetani
RepID=Q894M2_CLOTE
Length = 387
Score = 58.5 bits (140), Expect = 2e-07
Identities = 26/82 (31%), Positives = 49/82 (59%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
L+ F+G++ V V+ NR KL+ S + E+E+ +K+ L L+ G+ + + ++
Sbjct: 150 LNEFLGKEKDVKVIEFNRKDNKLVLSAKEVEDEKLTKKREELWKTLKEGEKINGKVVRLV 209
Query: 431 YFGIFCELEGVPALVHQSEVSW 496
FG+F ++ G+ LVH S++SW
Sbjct: 210 KFGVFVDIGGIEGLVHLSDLSW 231
[125][TOP]
>UniRef100_Q6AF54 30S ribosomal protein S1 n=1 Tax=Leifsonia xyli subsp. xyli
RepID=Q6AF54_LEIXX
Length = 480
Score = 58.5 bits (140), Expect = 2e-07
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L+ ++GQ+I+ ++ +
Sbjct: 120 KIKDADGVVTGTVIEVVKGGLIVDIGLRGFLPASLIELRRVRDLTPYLGQEIEAKILELD 179
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E + T + L G V K + I FG F +L GV LVH
Sbjct: 180 KNRNNVVLSRRALLEQTQSESRTTFLNNLYKGQVRKGVVSSIVNFGAFVDLGGVDGLVHV 239
Query: 482 SEVSW 496
SE+SW
Sbjct: 240 SELSW 244
[126][TOP]
>UniRef100_Q38WW2 30S Ribosomal protein S1 n=1 Tax=Lactobacillus sakei subsp. sakei
23K RepID=Q38WW2_LACSS
Length = 403
Score = 58.5 bits (140), Expect = 2e-07
Identities = 28/83 (33%), Positives = 50/83 (60%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
L+SF GQ++++ ++ + +LI S + +E + + + KL GD+V+ + ++T
Sbjct: 157 LNSFKGQELELQIIEIEPSENRLILSRKALVEQERQAQLKAVFEKLLPGDIVEGEVARLT 216
Query: 431 YFGIFCELEGVPALVHQSEVSWD 499
FG F +L GV LVH SE+S+D
Sbjct: 217 NFGAFVDLGGVDGLVHVSEISYD 239
[127][TOP]
>UniRef100_C6E2B4 Ribosomal protein S1 n=1 Tax=Geobacter sp. M21 RepID=C6E2B4_GEOSM
Length = 584
Score = 58.5 bits (140), Expect = 2e-07
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Frame = +2
Query: 152 LDSEVATTINGEVSSDMKLEDLLMV--YDREKQKFLSSFVGQKIKVNVVMANRNSRKLIF 325
++ ++ + G ++ D+ +E L D + FVGQ + ++ NR L+
Sbjct: 134 IEGKITGKVKGGMTVDVGVEAFLPASQVDLRPGGNMDRFVGQTYQFRILKLNRKRGNLVL 193
Query: 326 SMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
S R EE + + +A L+ GD+V +K I +G F +L GV L+H +++SW
Sbjct: 194 SRRVLLEEEREKARTETLATLKEGDIVNGVVKNIAEYGAFVDLGGVDGLLHVTDMSW 250
[128][TOP]
>UniRef100_C4Z9G0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein n=1 Tax=Eubacterium rectale ATCC 33656
RepID=C4Z9G0_EUBR3
Length = 371
Score = 58.5 bits (140), Expect = 2e-07
Identities = 29/85 (34%), Positives = 52/85 (61%)
Frame = +2
Query: 242 QKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIK 421
+K L+ F Q+I+ + + R++I + + E++ +++ L+A L VGDV++ +K
Sbjct: 143 EKDLNKFKDQEIEFIITEFDPRKRRIIGNRKVLLVEQKAKQQEELLANLHVGDVIEGTVK 202
Query: 422 KITYFGIFCELEGVPALVHQSEVSW 496
+T FG F +L GV L+H SE+SW
Sbjct: 203 NVTDFGAFIDLGGVDGLLHISEMSW 227
[129][TOP]
>UniRef100_B4UEK3 Ribosomal protein S1 n=3 Tax=Anaeromyxobacter RepID=B4UEK3_ANASK
Length = 568
Score = 58.5 bits (140), Expect = 2e-07
Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
Frame = +2
Query: 116 DVTSKSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNV 289
D S + D ++ + + G +S D+ ++ L D + L +G+K K V
Sbjct: 109 DEISAACERDELVEGVIVGRVKGGLSVDIGVKAFLPGSQVDIRPVRNLDKLIGEKFKFKV 168
Query: 290 VMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPA 469
+ N+ ++ S R +E E K+ + L+ G ++K +K +T +G F +L G+
Sbjct: 169 IKFNKKRGNIVLSRRVLLEKEREELKKETLKNLKEGAILKGVVKNLTDYGAFIDLGGIDG 228
Query: 470 LVHQSEVSW 496
L+H +++SW
Sbjct: 229 LLHVTDMSW 237
[130][TOP]
>UniRef100_B1KZB5 Ribosomal protein S1 n=1 Tax=Clostridium botulinum A3 str. Loch
Maree RepID=B1KZB5_CLOBM
Length = 387
Score = 58.5 bits (140), Expect = 2e-07
Identities = 26/89 (29%), Positives = 52/89 (58%)
Frame = +2
Query: 230 DREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVK 409
D + K L+ F G+ ++ ++ ++ RK++ S R + EEE ++K L+ L G ++
Sbjct: 143 DNKFVKDLNVFKGEIVRGRLIELDKQKRKVVLSSRVVKEEEEAKRKEELLNSLEKGQKIE 202
Query: 410 CCIKKITYFGIFCELEGVPALVHQSEVSW 496
++++ FG F ++ G+ LVH S++SW
Sbjct: 203 GVVRRLEKFGAFVDIGGMDGLVHNSQLSW 231
[131][TOP]
>UniRef100_C8P858 30S ribosomal protein S1 n=1 Tax=Lactobacillus antri DSM 16041
RepID=C8P858_9LACO
Length = 413
Score = 58.5 bits (140), Expect = 2e-07
Identities = 29/83 (34%), Positives = 48/83 (57%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
L+ F GQK++ ++ + +LI S + E + + A+L+ GDVV+ + ++T
Sbjct: 154 LNQFKGQKLEFKIIEIEPSENRLILSHKEIVKAEHEQAAEKIFAELQAGDVVEGKVARMT 213
Query: 431 YFGIFCELEGVPALVHQSEVSWD 499
FG F +L GV LVH SE+S+D
Sbjct: 214 NFGAFVDLGGVDGLVHVSEISYD 236
[132][TOP]
>UniRef100_C6P7Z4 RNA binding S1 domain protein n=1 Tax=Thermoanaerobacterium
thermosaccharolyticum DSM 571 RepID=C6P7Z4_CLOTS
Length = 362
Score = 58.5 bits (140), Expect = 2e-07
Identities = 29/82 (35%), Positives = 51/82 (62%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
L+ ++G+ +KV ++ N +KLI S + EE+++KK L+ L+ G V++ +K IT
Sbjct: 142 LNDYLGENVKVKIIDYIPN-KKLIASQKVVLEEEKLKKKEELLKTLQEGQVIQGVVKSIT 200
Query: 431 YFGIFCELEGVPALVHQSEVSW 496
FG F ++ G+ L+ SE+SW
Sbjct: 201 KFGAFIDIGGIDGLIPLSEISW 222
[133][TOP]
>UniRef100_C5RC60 Ribosomal protein S1 n=1 Tax=Weissella paramesenteroides ATCC 33313
RepID=C5RC60_WEIPA
Length = 405
Score = 58.5 bits (140), Expect = 2e-07
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Frame = +2
Query: 113 QDVTSKSPSPDSSLDSEVATTINGEVSSDMK----LEDLLMVYDREKQKFLSSFVGQKIK 280
+++ SK S D +++ V + G + D++ M+ +R Q L+ + GQ I+
Sbjct: 104 EEIASKH-SVDDIVEAPVTQAVKGGLVVDVEGVRGFVPASMIENRFVQD-LNQYKGQTIR 161
Query: 281 VNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEG 460
++ N +LI S R NEE + +L VGDV++ + ++T FG F +L G
Sbjct: 162 AKIIEINAADSRLILSRRDVLNEERSAALARIFDELSVGDVIEGKVARMTNFGAFIDLGG 221
Query: 461 VPALVHQSEVS 493
V LVH SE+S
Sbjct: 222 VDGLVHVSEIS 232
[134][TOP]
>UniRef100_C4E907 SSU ribosomal protein S1P n=1 Tax=Streptosporangium roseum DSM
43021 RepID=C4E907_STRRS
Length = 500
Score = 58.5 bits (140), Expect = 2e-07
Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 121 KIKDEDGIVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGRELEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E ++T + L+ G V K + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRQTFLNTLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[135][TOP]
>UniRef100_C2ESD6 30S ribosomal protein S1 n=1 Tax=Lactobacillus vaginalis ATCC 49540
RepID=C2ESD6_9LACO
Length = 410
Score = 58.5 bits (140), Expect = 2e-07
Identities = 29/83 (34%), Positives = 49/83 (59%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
L+ F GQ+++ ++ + +LI S + + E + + AKL+ GDVV+ + ++T
Sbjct: 154 LNQFKGQELEFKIIEIEPSENRLILSHKEIVQAQHEEAAKEIFAKLQPGDVVEGKVARMT 213
Query: 431 YFGIFCELEGVPALVHQSEVSWD 499
FG F +L GV LVH SE+S+D
Sbjct: 214 NFGAFIDLGGVDGLVHVSEISYD 236
[136][TOP]
>UniRef100_C2E215 30S ribosomal protein S1 n=1 Tax=Lactobacillus jensenii JV-V16
RepID=C2E215_9LACO
Length = 402
Score = 58.5 bits (140), Expect = 2e-07
Identities = 29/82 (35%), Positives = 48/82 (58%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
L ++G+ IKV + + N +LI S + EE E T+ ++L GD+V+ + ++T
Sbjct: 150 LKPYIGKSIKVKITEIDPNKNRLIISHKELIEEEREEAFETVASQLVAGDIVEGKVSRLT 209
Query: 431 YFGIFCELEGVPALVHQSEVSW 496
FG F ++ GV LVH SE+S+
Sbjct: 210 NFGAFVDVGGVDGLVHISEISY 231
[137][TOP]
>UniRef100_C2BWF2 30S ribosomal protein S1 n=1 Tax=Mobiluncus curtisii ATCC 43063
RepID=C2BWF2_9ACTO
Length = 489
Score = 58.5 bits (140), Expect = 2e-07
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L ++G++++ ++ +
Sbjct: 120 KVKQEDGVVTGTVIEVVKGGLIIDIGLRGFLPASLVEMRRVRDLQPYIGRQLETKIIELD 179
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E + T ++ L+ G V K + I FG F +L GV LVH
Sbjct: 180 KNRNNVVLSRRAFLEQTQSEVRTTFLSTLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHV 239
Query: 482 SEVSW 496
SE+SW
Sbjct: 240 SELSW 244
[138][TOP]
>UniRef100_C2AEM0 SSU ribosomal protein S1P n=1 Tax=Thermomonospora curvata DSM 43183
RepID=C2AEM0_THECU
Length = 487
Score = 58.5 bits (140), Expect = 2e-07
Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 121 KIKEEDGIVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGRELEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E ++T + L+ G V K + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRQTFLNTLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[139][TOP]
>UniRef100_C4IE80 Ribosomal protein S1 n=2 Tax=Clostridium butyricum
RepID=C4IE80_CLOBU
Length = 383
Score = 58.5 bits (140), Expect = 2e-07
Identities = 28/83 (33%), Positives = 49/83 (59%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
LS+ VG++I V + + N+ K++ S R E EE + K+ + L+ G+ +KK+
Sbjct: 149 LSTLVGKEIDVKITELDLNNNKIVASRRVIEEEEYNKNKKVIWNSLQEGEKRTGVVKKLV 208
Query: 431 YFGIFCELEGVPALVHQSEVSWD 499
FG F ++ GV L+H S++SW+
Sbjct: 209 KFGAFVDIGGVEGLIHLSDLSWE 231
[140][TOP]
>UniRef100_UPI000185C1DD 30S ribosomal protein S1 n=1 Tax=Corynebacterium amycolatum SK46
RepID=UPI000185C1DD
Length = 487
Score = 58.2 bits (139), Expect = 3e-07
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRK 316
D + V + G + D+ L L + + + + L ++GQ+I+ ++ ++N
Sbjct: 121 DEPVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGQEIEAKIIELDKNRNN 180
Query: 317 LIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ S R + + E + + +L+ G V K + I FG F +L GV LVH SE+SW
Sbjct: 181 VVLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSW 240
[141][TOP]
>UniRef100_Q47QP0 SSU ribosomal protein S1P n=1 Tax=Thermobifida fusca YX
RepID=Q47QP0_THEFY
Length = 485
Score = 58.2 bits (139), Expect = 3e-07
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 120 KIKEEDGVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGRELEAKIIELD 179
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E ++T + L+ G + K + I FG F +L GV LVH
Sbjct: 180 KNRNNVVLSRRAWLEQTQSEVRQTFLNTLQKGQIRKGVVSSIVNFGAFVDLGGVDGLVHV 239
Query: 482 SEVSW 496
SE+SW
Sbjct: 240 SELSW 244
[142][TOP]
>UniRef100_Q3B245 SSU ribosomal protein S1P n=1 Tax=Chlorobium luteolum DSM 273
RepID=Q3B245_PELLD
Length = 589
Score = 58.2 bits (139), Expect = 3e-07
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 17/161 (10%)
Frame = +2
Query: 65 GVDPSPYRQNLGVIGGQDVTSKSPSP-----DSSLDS-EVATTINGEVSSDMK------- 205
G D Y +N+ GQ + SK + D DS E T ING++ + +K
Sbjct: 89 GDDVEVYLENIEDKMGQLILSKKKADVLRIWDKIYDSIENDTIINGKIINRVKGGMTVSL 148
Query: 206 --LEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRT 373
+E L D + + + VGQ + VV N ++ ++ S + EE ++
Sbjct: 149 SGVEAFLPGSQIDVKPVRDFDALVGQTMDFRVVKINPVTQNIVVSHKVILEEEYAARREE 208
Query: 374 LMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++A ++VG V++ +K IT FGIF +L G+ LVH ++++W
Sbjct: 209 MLANIKVGMVLEGTVKNITDFGIFVDLGGLDGLVHITDITW 249
[143][TOP]
>UniRef100_B8G765 RNA binding S1 domain protein n=1 Tax=Chloroflexus aggregans DSM
9485 RepID=B8G765_CHLAD
Length = 397
Score = 58.2 bits (139), Expect = 3e-07
Identities = 29/87 (33%), Positives = 47/87 (54%)
Frame = +2
Query: 236 EKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCC 415
E+Q L + Q+I + V+ +R +L+ S R E +K L+ +L+ GDV+
Sbjct: 161 ERQYALQKMINQEIPLKVIEVDRERNRLVLSERAATQEWRKAQKHRLLTELQPGDVLVGK 220
Query: 416 IKKITYFGIFCELEGVPALVHQSEVSW 496
+ ++T FG F +L G L H SE+SW
Sbjct: 221 VNQLTNFGAFIDLGGADGLAHISELSW 247
[144][TOP]
>UniRef100_B5E9S8 Ribosomal protein S1 n=1 Tax=Geobacter bemidjiensis Bem
RepID=B5E9S8_GEOBB
Length = 584
Score = 58.2 bits (139), Expect = 3e-07
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Frame = +2
Query: 152 LDSEVATTINGEVSSDMKLEDLLMV--YDREKQKFLSSFVGQKIKVNVVMANRNSRKLIF 325
++ ++ + G ++ D+ +E L D + FVGQ + ++ NR L+
Sbjct: 134 IEGKITGKVKGGMTVDVGVEAFLPASQVDLRPGGNMDRFVGQTYQFRILKLNRKRGNLVL 193
Query: 326 SMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
S R EE + + +A L+ GD+V +K I +G F +L GV L+H +++SW
Sbjct: 194 SRRVLLEEERDKARTETLATLKEGDIVNGVVKNIAEYGAFVDLGGVDGLLHVTDMSW 250
[145][TOP]
>UniRef100_B1ZX89 Ribosomal protein S1 n=1 Tax=Opitutus terrae PB90-1
RepID=B1ZX89_OPITP
Length = 557
Score = 58.2 bits (139), Expect = 3e-07
Identities = 27/89 (30%), Positives = 48/89 (53%)
Frame = +2
Query: 230 DREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVK 409
D + K L +VGQ V+ N + ++ S R E+ K+R L+ ++ G + +
Sbjct: 132 DVQPPKNLDQYVGQTYDFKVLKINLERKNIVLSRRELIEEQRTNKRRALLDSIQPGQIRR 191
Query: 410 CCIKKITYFGIFCELEGVPALVHQSEVSW 496
+K IT FG F +L+G+ L+H +++SW
Sbjct: 192 GVVKNITDFGAFIDLDGMDGLLHITDMSW 220
[146][TOP]
>UniRef100_A5GE11 SSU ribosomal protein S1P n=1 Tax=Geobacter uraniireducens Rf4
RepID=A5GE11_GEOUR
Length = 584
Score = 58.2 bits (139), Expect = 3e-07
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Frame = +2
Query: 152 LDSEVATTINGEVSSDMKLEDLLMV--YDREKQKFLSSFVGQKIKVNVVMANRNSRKLIF 325
++ ++ + G + D+ +E L D L F+G+ K V+ NR ++
Sbjct: 134 IEGKITGKVKGGLIVDVGIEAFLPASQVDIRPGGNLDRFIGETCKFKVLKMNRKRGNIVL 193
Query: 326 SMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
S R EE + + T +A L GDVV +K I +G F +L GV L+H +++SW
Sbjct: 194 SRRVLLEEERDKARTTTLATLSEGDVVDGIVKNIADYGAFVDLGGVDGLLHVTDMSW 250
[147][TOP]
>UniRef100_A1SL06 SSU ribosomal protein S1P n=1 Tax=Nocardioides sp. JS614
RepID=A1SL06_NOCSJ
Length = 490
Score = 58.2 bits (139), Expect = 3e-07
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRK 316
D ++ V + G + D+ L L + + + + L +VGQ ++ ++ ++N
Sbjct: 128 DGVVEGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGQTLEAKIIELDKNRNN 187
Query: 317 LIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ S R + + E + + +L+ G + K + I FG F +L GV LVH SE+SW
Sbjct: 188 VVLSRRAWLEQTQSEVRHGFLTQLQKGQIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSW 247
[148][TOP]
>UniRef100_Q0YRX6 RNA binding S1 n=1 Tax=Chlorobium ferrooxidans DSM 13031
RepID=Q0YRX6_9CHLB
Length = 596
Score = 58.2 bits (139), Expect = 3e-07
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 17/161 (10%)
Frame = +2
Query: 65 GVDPSPYRQNLGVIGGQDVTSKSPSP-----DSSLDS-EVATTINGEVSSDMK------- 205
G D Y +N+ GQ + SK + D DS E T ING++ + +K
Sbjct: 90 GDDVEVYLENIEDKMGQLILSKKKADVLRIWDKIYDSIENDTIINGKIINRVKGGMTVSL 149
Query: 206 --LEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRT 373
+E L D + + + VGQ + VV N ++ ++ S + EE ++
Sbjct: 150 SGVEAFLPGSQIDVKPVRDFDALVGQTMDFRVVKINPVTQNIVVSHKVILEEEYAARREE 209
Query: 374 LMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++A ++VG V++ +K IT FGIF +L G+ LVH ++++W
Sbjct: 210 MLANIKVGMVLEGTVKNITDFGIFVDLGGLDGLVHITDITW 250
[149][TOP]
>UniRef100_C9PYY2 30S ribosomal protein S1 (Fragment) n=1 Tax=Prevotella sp. oral
taxon 472 str. F0295 RepID=C9PYY2_9BACT
Length = 514
Score = 58.2 bits (139), Expect = 3e-07
Identities = 26/79 (32%), Positives = 49/79 (62%)
Frame = +2
Query: 260 FVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFG 439
FVG+ ++ VV N+ R ++ S + EE +K+ +++KL G +++ +K IT +G
Sbjct: 91 FVGKTMEFKVVKINQEFRNVVVSHKALIEEELEAQKKEIISKLEKGQILEGTVKNITTYG 150
Query: 440 IFCELEGVPALVHQSEVSW 496
+F +L GV L+H +++SW
Sbjct: 151 VFVDLGGVDGLIHITDLSW 169
[150][TOP]
>UniRef100_C7XZA5 Ribosomal protein S1 n=2 Tax=Lactobacillus jensenii
RepID=C7XZA5_9LACO
Length = 402
Score = 58.2 bits (139), Expect = 3e-07
Identities = 29/82 (35%), Positives = 48/82 (58%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
L ++G+ IKV + + N +LI S + EE E T+ ++L GD+V+ + ++T
Sbjct: 150 LKPYIGKTIKVKITEIDPNKNRLILSHKELIEEEREEAFETVASQLVAGDIVEGKVSRLT 209
Query: 431 YFGIFCELEGVPALVHQSEVSW 496
FG F ++ GV LVH SE+S+
Sbjct: 210 NFGAFVDVGGVDGLVHISEISY 231
[151][TOP]
>UniRef100_C6MSI4 Ribosomal protein S1 n=1 Tax=Geobacter sp. M18 RepID=C6MSI4_9DELT
Length = 584
Score = 58.2 bits (139), Expect = 3e-07
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Frame = +2
Query: 152 LDSEVATTINGEVSSDMKLEDLLMV--YDREKQKFLSSFVGQKIKVNVVMANRNSRKLIF 325
++ ++ + G ++ D+ +E L D + FVGQ + ++ NR L+
Sbjct: 134 IEGKITGKVKGGMTVDVGVEAFLPASQVDLRPGGNMDRFVGQTYQFRILKLNRKRGNLVL 193
Query: 326 SMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
S R EE + + +A L+ GD+V +K I +G F +L GV L+H +++SW
Sbjct: 194 SRRVLLEEERDKARTETLATLKEGDIVSGVVKNIAEYGAFVDLGGVDGLLHVTDMSW 250
[152][TOP]
>UniRef100_C5G380 30S ribosomal protein S1 n=3 Tax=Lactobacillus jensenii
RepID=C5G380_9LACO
Length = 402
Score = 58.2 bits (139), Expect = 3e-07
Identities = 29/82 (35%), Positives = 48/82 (58%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
L ++G+ IKV + + N +LI S + EE E T+ ++L GD+V+ + ++T
Sbjct: 150 LKPYIGKTIKVKITEIDPNKNRLILSHKELIEEEREEAFETVASQLVAGDIVEGKVSRLT 209
Query: 431 YFGIFCELEGVPALVHQSEVSW 496
FG F ++ GV LVH SE+S+
Sbjct: 210 NFGAFVDVGGVDGLVHISEISY 231
[153][TOP]
>UniRef100_C1YTU7 SSU ribosomal protein S1P n=1 Tax=Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111 RepID=C1YTU7_NOCDA
Length = 496
Score = 58.2 bits (139), Expect = 3e-07
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 120 KIKEEDGVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGRELEAKIIELD 179
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E ++T + L+ G + K + I FG F +L GV LVH
Sbjct: 180 KNRNNVVLSRRAWLEQTQSEVRQTFLNTLQKGQIRKGVVSSIVNFGAFVDLGGVDGLVHV 239
Query: 482 SEVSW 496
SE+SW
Sbjct: 240 SELSW 244
[154][TOP]
>UniRef100_C0VTX6 30S ribosomal protein S1 n=2 Tax=Corynebacterium glucuronolyticum
RepID=C0VTX6_9CORY
Length = 482
Score = 58.2 bits (139), Expect = 3e-07
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRK 316
D + V + G + D+ L L + + + + L ++GQ+I+ ++ ++N
Sbjct: 121 DEPVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLEPYIGQEIEAKIIELDKNRNN 180
Query: 317 LIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ S R + + E + + +L+ G V K + I FG F +L GV LVH SE+SW
Sbjct: 181 VVLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSW 240
[155][TOP]
>UniRef100_C0BWI1 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM
15053 RepID=C0BWI1_9CLOT
Length = 376
Score = 58.2 bits (139), Expect = 3e-07
Identities = 51/164 (31%), Positives = 78/164 (47%)
Frame = +2
Query: 5 YRNLAAKWKFLAFESWLRRKGVDPSPYRQNLGVIGGQDVTSKSPSPDSSLDSEVATTING 184
Y+ LAA+ + K V +P Q LG GG V + E I
Sbjct: 88 YKRLAAEKGNERLKEAYENKEVLKAPVAQILG--GGLSVVIE----------EARVFIPA 135
Query: 185 EVSSDMKLEDLLMVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEK 364
+ SD +DL D+E + +S F ++ N V+ +R R+L+ + R EK
Sbjct: 136 SLVSDTYEKDLSKYQDQEIEFVISEFNPRR---NRVIGDR--RQLLVAAR-------AEK 183
Query: 365 KRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ L KL++GD V+ +K +T FG F +L GV L+H SE+SW
Sbjct: 184 QKELFEKLQIGDTVEGTVKNVTDFGAFIDLGGVDGLLHISEMSW 227
[156][TOP]
>UniRef100_Q72GM4 SSU ribosomal protein S1P n=1 Tax=Thermus thermophilus HB27
RepID=Q72GM4_THET2
Length = 536
Score = 57.8 bits (138), Expect = 4e-07
Identities = 27/82 (32%), Positives = 46/82 (56%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
L FVGQ++ ++ +R ++I S R EE+ + + + L G VV+ + ++T
Sbjct: 161 LDEFVGQQVLAKIIEFHRRKGRVILSRRAVLEEEQKKAREAFLKSLEPGQVVEGTVVEVT 220
Query: 431 YFGIFCELEGVPALVHQSEVSW 496
FG+F L V LVH+SE++W
Sbjct: 221 DFGVFVNLGPVDGLVHRSEITW 242
[157][TOP]
>UniRef100_Q6APU6 Probable 30S ribosomal protein S1 n=1 Tax=Desulfotalea psychrophila
RepID=Q6APU6_DESPS
Length = 570
Score = 57.8 bits (138), Expect = 4e-07
Identities = 30/126 (23%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Frame = +2
Query: 125 SKSPSPDSSLDSEVATTINGEVSSDMKLEDLLMV--YDREKQKFLSSFVGQKIKVNVVMA 298
+K DS+++ + + + G +S D+ + L D K L + +G+ ++ V+
Sbjct: 106 AKIQEEDSTIEGRIESRVKGGMSVDIGVPAFLPYSQIDLRPVKDLDALIGESLEFKVLKF 165
Query: 299 NRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVH 478
N+ ++ S R E + + + +KL G ++K I IT +G+F ++ G+ L H
Sbjct: 166 NKKRNNVVISRRAILEEARNKLREEMRSKLEEGQIIKGAITNITDYGLFIDMGGMDGLCH 225
Query: 479 QSEVSW 496
+++SW
Sbjct: 226 ITDLSW 231
[158][TOP]
>UniRef100_Q5YYJ8 Putative ribosomal protein S1 n=1 Tax=Nocardia farcinica
RepID=Q5YYJ8_NOCFA
Length = 487
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRK 316
D ++ V + G + D+ L L + + + + L +VG++I+ ++ ++N
Sbjct: 122 DEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKEIEAKIIELDKNRNN 181
Query: 317 LIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ S R + + E + + +L+ G V K + I FG F +L GV LVH SE+SW
Sbjct: 182 VVLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSW 241
[159][TOP]
>UniRef100_Q5SLY1 30S ribosomal protein S1 n=1 Tax=Thermus thermophilus HB8
RepID=Q5SLY1_THET8
Length = 536
Score = 57.8 bits (138), Expect = 4e-07
Identities = 27/82 (32%), Positives = 46/82 (56%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
L FVGQ++ ++ +R ++I S R EE+ + + + L G VV+ + ++T
Sbjct: 161 LDEFVGQQVLAKIIEFHRRKGRVILSRRAVLEEEQKKAREAFLKSLEPGQVVEGTVVEVT 220
Query: 431 YFGIFCELEGVPALVHQSEVSW 496
FG+F L V LVH+SE++W
Sbjct: 221 DFGVFVNLGPVDGLVHRSEITW 242
[160][TOP]
>UniRef100_Q0SI29 30S ribosomal protein S1 n=1 Tax=Rhodococcus jostii RHA1
RepID=Q0SI29_RHOSR
Length = 494
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRK 316
D ++ V + G + D+ L L + + + + L +VG++I+ ++ ++N
Sbjct: 123 DEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKEIEAKIIELDKNRNN 182
Query: 317 LIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ S R + + E + + +L+ G V K + I FG F +L GV LVH SE+SW
Sbjct: 183 VVLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGIVSSIVNFGAFVDLGGVDGLVHVSELSW 242
[161][TOP]
>UniRef100_Q03F88 SSU ribosomal protein S1P n=1 Tax=Pediococcus pentosaceus ATCC
25745 RepID=Q03F88_PEDPA
Length = 402
Score = 57.8 bits (138), Expect = 4e-07
Identities = 28/82 (34%), Positives = 48/82 (58%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
L+++ GQ +KV ++ +LI S + N E K+ ++A ++ GDVV + ++T
Sbjct: 155 LNAYKGQTLKVKIIEVKPEDNRLILSHKAVLNAEREAKRGEVLASIKEGDVVTGKVARLT 214
Query: 431 YFGIFCELEGVPALVHQSEVSW 496
FG F +L G+ LVH SE+S+
Sbjct: 215 NFGAFVDLGGIDGLVHISEISY 236
[162][TOP]
>UniRef100_C5BV58 RNA binding S1 domain protein n=1 Tax=Beutenbergia cavernae DSM
12333 RepID=C5BV58_BEUC1
Length = 488
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 121 KIKEEDGVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKELEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E + T +A L+ G + + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRSTFLATLQKGQIRNGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[163][TOP]
>UniRef100_C1AT24 30S ribosomal protein S1 n=1 Tax=Rhodococcus opacus B4
RepID=C1AT24_RHOOB
Length = 494
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRK 316
D ++ V + G + D+ L L + + + + L +VG++I+ ++ ++N
Sbjct: 123 DEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKEIEAKIIELDKNRNN 182
Query: 317 LIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ S R + + E + + +L+ G V K + I FG F +L GV LVH SE+SW
Sbjct: 183 VVLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSW 242
[164][TOP]
>UniRef100_C1A085 Probable 30S ribosomal protein S1 n=1 Tax=Rhodococcus erythropolis
PR4 RepID=C1A085_RHOE4
Length = 495
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRK 316
D ++ V + G + D+ L L + + + + L +VG++I+ ++ ++N
Sbjct: 123 DEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKEIEAKIIELDKNRNN 182
Query: 317 LIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ S R + + E + + +L+ G V K + I FG F +L GV LVH SE+SW
Sbjct: 183 VVLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSW 242
[165][TOP]
>UniRef100_B3QQD6 RNA binding S1 domain protein n=1 Tax=Chlorobaculum parvum NCIB
8327 RepID=B3QQD6_CHLP8
Length = 583
Score = 57.8 bits (138), Expect = 4e-07
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 17/163 (10%)
Frame = +2
Query: 59 RKGVDPSPYRQNLGVIGGQDVTSKSPSP-----DSSLDS-EVATTINGEVSSDMK----- 205
++G + Y +NL GQ + SK + D DS E T ING++ + +K
Sbjct: 87 KEGDEVEVYLENLEDKMGQLILSKRKADVLRIWDKIYDSIENDTIINGKIINRVKGGMTV 146
Query: 206 ----LEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKK 367
+E L D + + + VG+ + VV N ++ ++ S + EE K+
Sbjct: 147 SLSGVEAFLPGSQIDVKPVRDFDALVGKTMDFRVVKINPVTQNIVVSHKVILEEEYAAKR 206
Query: 368 RTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++A ++VG V++ +K IT FGIF +L G+ LVH ++++W
Sbjct: 207 EEMLANIKVGMVLEGTVKNITDFGIFVDLGGLDGLVHITDITW 249
[166][TOP]
>UniRef100_B3DUV3 Ribosomal protein S1 n=1 Tax=Methylacidiphilum infernorum V4
RepID=B3DUV3_METI4
Length = 449
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 2/129 (1%)
Frame = +2
Query: 116 DVTSKSPSPDSSLDSEVATTINGEVSSDMKLEDLLMV--YDREKQKFLSSFVGQKIKVNV 289
D K+ ++ +V + G + ++ +E L D K L + G + +
Sbjct: 87 DKILKTFEEGGTITGKVKQVVKGGLMLNIGVEAFLPASQIDIVPPKNLKEYEGATLTCKI 146
Query: 290 VMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPA 469
V + + ++ S R E +K+ + K+ VGD+VK +K +T FG F +L+G+
Sbjct: 147 VKISEERKNVVLSRREIVEAERNQKRLQFLEKVHVGDLVKGVVKNVTDFGAFIDLDGIDG 206
Query: 470 LVHQSEVSW 496
L+H +++SW
Sbjct: 207 LIHITDMSW 215
[167][TOP]
>UniRef100_B2A4N7 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Natranaerobius
thermophilus JW/NM-WN-LF RepID=B2A4N7_NATTJ
Length = 705
Score = 57.8 bits (138), Expect = 4e-07
Identities = 25/81 (30%), Positives = 49/81 (60%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
LS +VG+++++ + +R+ K++ S + +E+ EKK M + GD+V +K++T
Sbjct: 452 LSKYVGEELRLKPIELDRSRNKIVLSQKNILEQEQEEKKNKTMETITEGDIVDGTVKRLT 511
Query: 431 YFGIFCELEGVPALVHQSEVS 493
FG F ++ G+ L H S++S
Sbjct: 512 DFGAFIDIGGIDGLCHISQIS 532
[168][TOP]
>UniRef100_A8LX11 RNA binding S1 domain protein n=1 Tax=Salinispora arenicola CNS-205
RepID=A8LX11_SALAI
Length = 493
Score = 57.8 bits (138), Expect = 4e-07
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 121 KIKDEDGVVRGSVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGRELEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E + + KL+ G V K + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRTEFLNKLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[169][TOP]
>UniRef100_A7HCQ7 Ribosomal protein S1 n=1 Tax=Anaeromyxobacter sp. Fw109-5
RepID=A7HCQ7_ANADF
Length = 578
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
Frame = +2
Query: 116 DVTSKSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNV 289
D S + D ++ + + G +S D+ ++ L D + L +G+K K V
Sbjct: 119 DEISAACERDELVEGVIVGRVKGGLSVDIGVKAFLPGSQVDIRPVRNLDKLIGEKFKFKV 178
Query: 290 VMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPA 469
+ N+ ++ S R +E E K+ + L+ G ++K +K +T +G F +L G+
Sbjct: 179 IKFNKKRGNIVLSRRVLLEKEREELKKETLKNLKEGAILKGQVKNLTDYGAFIDLGGIDG 238
Query: 470 LVHQSEVSW 496
L+H +++SW
Sbjct: 239 LLHVTDMSW 247
[170][TOP]
>UniRef100_A4X9K0 SSU ribosomal protein S1P n=1 Tax=Salinispora tropica CNB-440
RepID=A4X9K0_SALTO
Length = 493
Score = 57.8 bits (138), Expect = 4e-07
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 121 KIKDEDGVVRGSVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGRELEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E + + KL+ G V K + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRTEFLNKLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[171][TOP]
>UniRef100_Q83YV9 30S ribosomal protein S1 n=1 Tax=Thermus thermophilus
RepID=Q83YV9_THETH
Length = 536
Score = 57.8 bits (138), Expect = 4e-07
Identities = 27/82 (32%), Positives = 46/82 (56%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
L FVGQ++ ++ +R ++I S R EE+ + + + L G VV+ + ++T
Sbjct: 161 LDEFVGQQVLAKIIEFHRRKGRVILSRRAVLEEEQKKAREAFLKSLEPGQVVEGTVVEVT 220
Query: 431 YFGIFCELEGVPALVHQSEVSW 496
FG+F L V LVH+SE++W
Sbjct: 221 DFGVFVNLGPVDGLVHRSEITW 242
[172][TOP]
>UniRef100_C7XU35 Ribosomal protein S1 n=1 Tax=Lactobacillus coleohominis 101-4-CHN
RepID=C7XU35_9LACO
Length = 409
Score = 57.8 bits (138), Expect = 4e-07
Identities = 28/83 (33%), Positives = 49/83 (59%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
L+ F GQ+++ ++ + +LI S + +E E + + ++L GDVV+ + ++T
Sbjct: 153 LNQFKGQELEFKIIEIEPSENRLILSHKEIVKKEHEEAAKKIFSELAAGDVVEGKVARMT 212
Query: 431 YFGIFCELEGVPALVHQSEVSWD 499
FG F +L GV LVH SE+S+D
Sbjct: 213 NFGAFIDLGGVDGLVHVSEISYD 235
[173][TOP]
>UniRef100_C5EU30 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Clostridiales
bacterium 1_7_47FAA RepID=C5EU30_9FIRM
Length = 665
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/118 (27%), Positives = 64/118 (54%), Gaps = 3/118 (2%)
Frame = +2
Query: 152 LDSEVATTINGEVSSDMKLEDLLM---VYDREKQKFLSSFVGQKIKVNVVMANRNSRKLI 322
L ++VA ++G +S +++ + + + +K LS + GQ I+ + N R++I
Sbjct: 406 LTAKVAQVLDGGLSVEVEGARVFIPASLVSDSYEKDLSKYAGQDIEFVITEFNPKRRRII 465
Query: 323 FSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
+ ++ + K L +++++GD V+ +K +T FG F +L G L+H SE+SW
Sbjct: 466 GDRKQLLVAQKAQLKEELFSRIQIGDAVEGTVKNVTDFGAFIDLGGADGLLHISEMSW 523
[174][TOP]
>UniRef100_C4WA78 30S ribosomal protein S1 homolog n=1 Tax=Staphylococcus warneri
L37603 RepID=C4WA78_STAWA
Length = 392
Score = 57.8 bits (138), Expect = 4e-07
Identities = 30/80 (37%), Positives = 46/80 (57%)
Frame = +2
Query: 254 SSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITY 433
S F GQ IK+ V + + ++I S + E E KK +L+ L GDV++ + ++T
Sbjct: 147 SDFEGQTIKIKVEELDPENNRVILSRKAVEQAENEVKKASLLDSLNAGDVIEGKVARLTN 206
Query: 434 FGIFCELEGVPALVHQSEVS 493
FG F ++ GV LVH SE+S
Sbjct: 207 FGAFVDIGGVDGLVHVSELS 226
[175][TOP]
>UniRef100_C4RKJ2 30S ribosomal protein S1 n=1 Tax=Micromonospora sp. ATCC 39149
RepID=C4RKJ2_9ACTO
Length = 497
Score = 57.8 bits (138), Expect = 4e-07
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 121 KIKDEDGVVRGSVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGRELEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E + + KL+ G V K + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRTEFLNKLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[176][TOP]
>UniRef100_C3JQM6 30S ribosomal protein S1 n=1 Tax=Rhodococcus erythropolis SK121
RepID=C3JQM6_RHOER
Length = 495
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRK 316
D ++ V + G + D+ L L + + + + L +VG++I+ ++ ++N
Sbjct: 123 DEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKEIEAKIIELDKNRNN 182
Query: 317 LIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ S R + + E + + +L+ G V K + I FG F +L GV LVH SE+SW
Sbjct: 183 VVLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSW 242
[177][TOP]
>UniRef100_B7AU11 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus
ATCC 43243 RepID=B7AU11_9BACE
Length = 365
Score = 57.8 bits (138), Expect = 4e-07
Identities = 28/88 (31%), Positives = 49/88 (55%)
Frame = +2
Query: 242 QKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIK 421
+K L+ F GQ++ + N R++I + ++ E+ L+A ++ GD ++ +K
Sbjct: 143 EKDLTKFEGQEVSFVITEYNPKKRRIIGDCKQLILAKKAEQAEKLLASIKEGDTIEGTVK 202
Query: 422 KITYFGIFCELEGVPALVHQSEVSWDAT 505
+T FG F +L GV L+H SE+SW T
Sbjct: 203 NVTDFGAFIDLGGVDGLLHISEMSWGRT 230
[178][TOP]
>UniRef100_C7TCE1 30S ribosomal protein S1 n=4 Tax=Lactobacillus rhamnosus
RepID=C7TCE1_LACRG
Length = 436
Score = 57.8 bits (138), Expect = 4e-07
Identities = 27/83 (32%), Positives = 50/83 (60%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
L+ + G++++ ++ + +LI S R + E ++ + AK++ GDVV+ + ++T
Sbjct: 155 LNQYKGKELEFKIIEIEPSENRLILSHRAIVEASKAEARKEIFAKIQPGDVVEGKVARLT 214
Query: 431 YFGIFCELEGVPALVHQSEVSWD 499
FG F +L GV LVH SE+S+D
Sbjct: 215 NFGAFVDLGGVDGLVHVSEISFD 237
[179][TOP]
>UniRef100_B1B9P5 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1
Tax=Clostridium botulinum C str. Eklund
RepID=B1B9P5_CLOBO
Length = 634
Score = 57.8 bits (138), Expect = 4e-07
Identities = 27/84 (32%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Frame = +2
Query: 251 LSSFVGQKIKVNVV--MANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKK 424
LS ++GQ++ VN++ NR K++ S R +E+ +K+ L+ +V+ +K+
Sbjct: 427 LSVYIGQEMNVNIIEFKVNRKGTKIVASRREFLQKEQTKKEEASWEILKKDSIVEGEVKR 486
Query: 425 ITYFGIFCELEGVPALVHQSEVSW 496
+T FG F ++ G+ L+H SE+SW
Sbjct: 487 LTKFGAFVDVNGIDGLLHVSEISW 510
[180][TOP]
>UniRef100_A3TLI2 30S ribosomal protein S1 n=1 Tax=Janibacter sp. HTCC2649
RepID=A3TLI2_9MICO
Length = 502
Score = 57.8 bits (138), Expect = 4e-07
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++I+ ++ +
Sbjct: 120 KVKEEDGVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKEIEAKIIELD 179
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E + T + +L+ G V + I FG F +L GV LVH
Sbjct: 180 KNRNNVVLSRRAWLEQTQSEVRTTFLKELQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHV 239
Query: 482 SEVSW 496
SE+SW
Sbjct: 240 SELSW 244
[181][TOP]
>UniRef100_UPI0001B576EF 30S ribosomal protein S1 n=1 Tax=Streptomyces sp. C
RepID=UPI0001B576EF
Length = 504
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 122 KIKEEDGIVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKELEAKIIELD 181
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E ++T + L+ G V + I FG F +L GV LVH
Sbjct: 182 KNRNNVVLSRRAWLEQTQSEVRQTFLTTLQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHV 241
Query: 482 SEVSW 496
SE+SW
Sbjct: 242 SELSW 246
[182][TOP]
>UniRef100_UPI0001B57355 30S ribosomal protein S1 n=1 Tax=Streptomyces sp. SPB78
RepID=UPI0001B57355
Length = 504
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 121 KIKEEDGIVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKELEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E ++T + L+ G V + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRQTFLTTLQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[183][TOP]
>UniRef100_UPI0001B52391 30S ribosomal protein S1 n=1 Tax=Streptomyces viridochromogenes DSM
40736 RepID=UPI0001B52391
Length = 497
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 121 KIKEEDGIVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKELEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E ++T + L+ G V + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRQTFLTTLQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[184][TOP]
>UniRef100_UPI0001B51778 30S ribosomal protein S1 n=1 Tax=Streptomyces griseoflavus Tu4000
RepID=UPI0001B51778
Length = 497
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 121 KIKEEDGIVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKELEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E ++T + L+ G V + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRQTFLTTLQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[185][TOP]
>UniRef100_UPI0001B4C179 30S ribosomal protein S1 n=1 Tax=Streptomyces hygroscopicus ATCC
53653 RepID=UPI0001B4C179
Length = 502
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 121 KIKEEDGIVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKELEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E ++T + L+ G V + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRQTFLTTLQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[186][TOP]
>UniRef100_UPI0001AF2156 30S ribosomal protein S1 n=1 Tax=Streptomyces roseosporus NRRL
15998 RepID=UPI0001AF2156
Length = 504
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 121 KIKEEDGIVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKELEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E ++T + L+ G V + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRQTFLTTLQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[187][TOP]
>UniRef100_UPI0001AF14C3 30S ribosomal protein S1 n=1 Tax=Streptomyces ghanaensis ATCC 14672
RepID=UPI0001AF14C3
Length = 497
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 121 KIKEEDGIVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKELEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E ++T + L+ G V + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRQTFLTTLQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[188][TOP]
>UniRef100_UPI0001AEEEFE 30S ribosomal protein S1 n=1 Tax=Streptomyces albus J1074
RepID=UPI0001AEEEFE
Length = 504
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 121 KIKEEDGIVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKELEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E ++T + L+ G V + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRQTFLTTLQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[189][TOP]
>UniRef100_Q8KFN4 Ribosomal protein S1 n=2 Tax=Chlorobaculum tepidum
RepID=Q8KFN4_CHLTE
Length = 550
Score = 57.4 bits (137), Expect = 5e-07
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 17/161 (10%)
Frame = +2
Query: 65 GVDPSPYRQNLGVIGGQDVTSKSPSP-----DSSLDS-EVATTINGEVSSDMK------- 205
G D Y +N+ GQ + SK + D DS E T ING++ + +K
Sbjct: 56 GDDVEVYLENIEDKMGQLILSKRKADVLRIWDKIYDSIENDTIINGKIINRVKGGMTVSL 115
Query: 206 --LEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRT 373
+E L D + + + VG+ + VV N ++ ++ S + EE K+
Sbjct: 116 SGVEAFLPGSQIDVKPVRDFDALVGKTMDFRVVKINPVTQNIVVSHKVILEEEYAAKREE 175
Query: 374 LMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++A ++VG V++ +K IT FGIF +L G+ LVH ++++W
Sbjct: 176 MLANIKVGMVLEGTVKNITDFGIFVDLGGLDGLVHITDITW 216
[190][TOP]
>UniRef100_Q9S2K5 30S ribosomal protein S1 n=1 Tax=Streptomyces coelicolor
RepID=Q9S2K5_STRCO
Length = 502
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 121 KIKEEDGIVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKELEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E ++T + L+ G V + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRQTFLTTLQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[191][TOP]
>UniRef100_Q8NQR5 Ribosomal protein S1 n=1 Tax=Corynebacterium glutamicum
RepID=Q8NQR5_CORGL
Length = 486
Score = 57.4 bits (137), Expect = 5e-07
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRK 316
D + V + G + D+ L L + + + + L ++GQ+++ ++ ++N
Sbjct: 121 DEPVTGTVIEVVKGGLIIDIGLRGFLPASLVEMRRVRDLDPYIGQELEAKIIELDKNRNN 180
Query: 317 LIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ S R + + E + + +L+ G V K + I FG F +L GV LVH SE+SW
Sbjct: 181 VVLSRRAFLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSW 240
[192][TOP]
>UniRef100_Q82A26 Putative ribosomal protein S1 n=1 Tax=Streptomyces avermitilis
RepID=Q82A26_STRAW
Length = 501
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 121 KIKEEDGIVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKELEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E ++T + L+ G V + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRQTFLTTLQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[193][TOP]
>UniRef100_Q2JE53 SSU ribosomal protein S1P n=1 Tax=Frankia sp. CcI3
RepID=Q2JE53_FRASC
Length = 492
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 131 KLKDEDGVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGRELEAKIIELD 190
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E + +A+L G + K + I FG F +L GV LVH
Sbjct: 191 KNRNNVVLSRRAWLEQTQSEVRSEFLAQLAKGQIRKGVVSSIVNFGAFVDLGGVDGLVHV 250
Query: 482 SEVSW 496
SE+SW
Sbjct: 251 SELSW 255
[194][TOP]
>UniRef100_Q0RPU6 30S ribosomal protein S1 n=1 Tax=Frankia alni ACN14a
RepID=Q0RPU6_FRAAA
Length = 518
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 156 KLKDEDGVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGRELEAKIIELD 215
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E + +A+L G + K + I FG F +L GV LVH
Sbjct: 216 KNRNNVVLSRRAWLEQTQSEVRSEFLAQLAKGQIRKGVVSSIVNFGAFVDLGGVDGLVHV 275
Query: 482 SEVSW 496
SE+SW
Sbjct: 276 SELSW 280
[195][TOP]
>UniRef100_Q039G5 SSU ribosomal protein S1P n=1 Tax=Lactobacillus casei ATCC 334
RepID=Q039G5_LACC3
Length = 439
Score = 57.4 bits (137), Expect = 5e-07
Identities = 27/83 (32%), Positives = 49/83 (59%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
LS + G++++ ++ + +LI S R + E ++ + AK++ GD V+ + ++T
Sbjct: 155 LSQYKGKELEFKIIEIEPSENRLILSHRAIVEASKAEARKEIFAKIQPGDTVEGKVARLT 214
Query: 431 YFGIFCELEGVPALVHQSEVSWD 499
FG F +L GV LVH SE+S+D
Sbjct: 215 NFGAFVDLGGVDGLVHVSEISFD 237
[196][TOP]
>UniRef100_C3KT68 Ribosomal protein S1 n=1 Tax=Clostridium botulinum Ba4 str. 657
RepID=C3KT68_CLOB6
Length = 387
Score = 57.4 bits (137), Expect = 5e-07
Identities = 26/89 (29%), Positives = 51/89 (57%)
Frame = +2
Query: 230 DREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVK 409
D + K L+ F G+ +K ++ ++ RK++ S R + +EE ++K L L G ++
Sbjct: 143 DNKYVKDLNVFKGEIVKGRLIELDKQKRKVVLSSRVVKEKEEAKRKEELWNSLEKGQKIE 202
Query: 410 CCIKKITYFGIFCELEGVPALVHQSEVSW 496
++++ FG F ++ G+ LVH S++SW
Sbjct: 203 GVVRRLEKFGAFVDIGGMDGLVHNSQLSW 231
[197][TOP]
>UniRef100_B4S415 RNA binding S1 domain protein n=1 Tax=Prosthecochloris aestuarii
DSM 271 RepID=B4S415_PROA2
Length = 588
Score = 57.4 bits (137), Expect = 5e-07
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 17/161 (10%)
Frame = +2
Query: 65 GVDPSPYRQNLGVIGGQDVTSKSPSP-----DSSLDS-EVATTINGEVSSDMK------- 205
G + Y +N+ GQ + SK + D DS E T ING++ + +K
Sbjct: 91 GDEVEVYLENIEDKMGQLILSKRKADVLRIWDKIYDSIENDTIINGKIINRVKGGMTVSL 150
Query: 206 --LEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRT 373
+E L D + + + VGQ + VV N ++ ++ S + EE K+
Sbjct: 151 SGVEAFLPGSQIDVKPVRDFDALVGQTMDFRVVKINPVTQNIVVSHKVILEEEYAAKREE 210
Query: 374 LMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++A ++VG V++ +K IT FGIF +L G+ LVH ++++W
Sbjct: 211 MLANIKVGMVLEGTVKNITDFGIFVDLGGLDGLVHITDITW 251
[198][TOP]
>UniRef100_B1W0V3 Putative 30S ribosomal protein S1 n=1 Tax=Streptomyces griseus
subsp. griseus NBRC 13350 RepID=B1W0V3_STRGG
Length = 505
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 121 KIKEEDGIVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKELEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E ++T + L+ G V + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRQTFLTTLQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[199][TOP]
>UniRef100_A8L4N4 RNA binding S1 domain protein n=1 Tax=Frankia sp. EAN1pec
RepID=A8L4N4_FRASN
Length = 493
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 131 KLKEEDGVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGRELEAKIIELD 190
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E + +A+L G + K + I FG F +L GV LVH
Sbjct: 191 KNRNNVVLSRRAWLEQTQSEVRSEFLAQLAKGQIRKGVVSSIVNFGAFVDLGGVDGLVHV 250
Query: 482 SEVSW 496
SE+SW
Sbjct: 251 SELSW 255
[200][TOP]
>UniRef100_A6LQP2 RNA binding S1 domain protein n=1 Tax=Clostridium beijerinckii
NCIMB 8052 RepID=A6LQP2_CLOB8
Length = 384
Score = 57.4 bits (137), Expect = 5e-07
Identities = 29/83 (34%), Positives = 48/83 (57%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
LSS VG+ + V + + ++K+I S R E EE + K+ + L+ G+ +KKI
Sbjct: 149 LSSLVGRDLDVRITELDFKNKKVIASRRIIEEEEYNKNKKNIWDNLKEGEKRNGVVKKIV 208
Query: 431 YFGIFCELEGVPALVHQSEVSWD 499
FG F ++ GV L+H S++SW+
Sbjct: 209 KFGAFVDIGGVEGLIHLSDLSWE 231
[201][TOP]
>UniRef100_A4QDW3 Putative uncharacterized protein n=1 Tax=Corynebacterium glutamicum
R RepID=A4QDW3_CORGB
Length = 486
Score = 57.4 bits (137), Expect = 5e-07
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRK 316
D + V + G + D+ L L + + + + L ++GQ+++ ++ ++N
Sbjct: 121 DEPVTGTVIEVVKGGLIIDIGLRGFLPASLVEMRRVRDLDPYIGQELEAKIIELDKNRNN 180
Query: 317 LIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ S R + + E + + +L+ G V K + I FG F +L GV LVH SE+SW
Sbjct: 181 VVLSRRAFLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSW 240
[202][TOP]
>UniRef100_C9YWQ2 30S ribosomal protein S1 n=1 Tax=Streptomyces scabiei 87.22
RepID=C9YWQ2_STRSC
Length = 498
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 121 KIKEEDGIVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKELEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E ++T + L+ G V + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRQTFLTTLQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[203][TOP]
>UniRef100_C9NHH8 RNA binding S1 domain protein n=1 Tax=Streptomyces flavogriseus
ATCC 33331 RepID=C9NHH8_9ACTO
Length = 503
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 121 KIKEEDGIVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKELEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E ++T + L+ G V + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRQTFLTTLQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[204][TOP]
>UniRef100_C8NLF1 30S ribosomal protein S1 n=2 Tax=Corynebacterium efficiens
RepID=C8NLF1_COREF
Length = 485
Score = 57.4 bits (137), Expect = 5e-07
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRK 316
D + V + G + D+ L L + + + + L ++GQ+++ ++ ++N
Sbjct: 121 DEPVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLDPYIGQELEAKIIELDKNRNN 180
Query: 317 LIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ S R + + E + + +L+ G V K + I FG F +L GV LVH SE+SW
Sbjct: 181 VVLSRRAFLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSW 240
[205][TOP]
>UniRef100_C8M3C0 RNA binding S1 domain-containing protein n=1 Tax=Staphylococcus
aureus A8115 RepID=C8M3C0_STAAU
Length = 391
Score = 57.4 bits (137), Expect = 5e-07
Identities = 30/80 (37%), Positives = 46/80 (57%)
Frame = +2
Query: 254 SSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITY 433
S F GQ I++ V + + ++I S + E EE KK L+ L GDV+ + ++T
Sbjct: 147 SVFDGQTIRIKVEELDPENNRVILSRKAVEQEENDAKKDQLLQSLNEGDVIHGKVARLTQ 206
Query: 434 FGIFCELEGVPALVHQSEVS 493
FG+F ++ GV LVH SE+S
Sbjct: 207 FGVFIDIGGVDGLVHVSELS 226
[206][TOP]
>UniRef100_C7GDH9 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1
Tax=Roseburia intestinalis L1-82 RepID=C7GDH9_9FIRM
Length = 374
Score = 57.4 bits (137), Expect = 5e-07
Identities = 29/85 (34%), Positives = 51/85 (60%)
Frame = +2
Query: 242 QKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIK 421
+K LS + Q I+ + N R++I + +++E+++ L AK++VGDV++ +K
Sbjct: 143 EKDLSKYKDQDIEFVISEFNPKRRRIIGDRKQLLVAKKLEQQKELFAKIKVGDVMEGTVK 202
Query: 422 KITYFGIFCELEGVPALVHQSEVSW 496
+T FG F +L G L+H SE+SW
Sbjct: 203 NVTDFGAFIDLGGADGLLHISEMSW 227
[207][TOP]
>UniRef100_B3WE79 30S Ribosomal protein S1 n=3 Tax=Lactobacillus casei group
RepID=B3WE79_LACCB
Length = 439
Score = 57.4 bits (137), Expect = 5e-07
Identities = 27/83 (32%), Positives = 49/83 (59%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
LS + G++++ ++ + +LI S R + E ++ + AK++ GD V+ + ++T
Sbjct: 155 LSQYKGKELEFKIIEIEPSENRLILSHRAIVEASKAEARKEIFAKIQPGDTVEGKVARLT 214
Query: 431 YFGIFCELEGVPALVHQSEVSWD 499
FG F +L GV LVH SE+S+D
Sbjct: 215 NFGAFVDLGGVDGLVHVSEISFD 237
[208][TOP]
>UniRef100_C2AT60 SSU ribosomal protein S1P n=1 Tax=Tsukamurella paurometabola DSM
20162 RepID=C2AT60_TSUPA
Length = 499
Score = 57.4 bits (137), Expect = 5e-07
Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRK 316
D ++ V + G + D+ L L + + + + L ++G++I+ ++ ++N
Sbjct: 128 DEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNN 187
Query: 317 LIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ S R + + E + + +L+ G V K + I FG F +L GV LVH SE+SW
Sbjct: 188 VVLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSW 247
[209][TOP]
>UniRef100_C1I6R1 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Clostridium
sp. 7_2_43FAA RepID=C1I6R1_9CLOT
Length = 635
Score = 57.4 bits (137), Expect = 5e-07
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 SSFVGQKIKVNVV-MANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
S+ +G+ ++V ++ + N K++ S R EE+ K+ + VGDVVK +K+ T
Sbjct: 430 SNLIGENLEVRLIDFSLDNPSKIVASRRIILEEEKKVKEDAAWENINVGDVVKAEVKRFT 489
Query: 431 YFGIFCELEGVPALVHQSEVSW 496
FG F ++ GV L+H S++SW
Sbjct: 490 NFGAFADINGVDGLIHLSQISW 511
[210][TOP]
>UniRef100_C0UKJ4 SSU ribosomal protein S1P n=1 Tax=Gordonia bronchialis DSM 43247
RepID=C0UKJ4_9ACTO
Length = 487
Score = 57.4 bits (137), Expect = 5e-07
Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRK 316
D ++ V + G + D+ L L + + + + L ++G++I+ ++ ++N
Sbjct: 123 DEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNN 182
Query: 317 LIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ S R + + E + + +L+ G V K + I FG F +L GV LVH SE+SW
Sbjct: 183 VVLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSW 242
[211][TOP]
>UniRef100_B6AR90 Ribosomal protein S1 n=1 Tax=Leptospirillum sp. Group II '5-way CG'
RepID=B6AR90_9BACT
Length = 591
Score = 57.4 bits (137), Expect = 5e-07
Identities = 30/117 (25%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Frame = +2
Query: 152 LDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIF 325
++ + + I G ++ D+ L+ L D + + +GQ I+V ++ N+ +I
Sbjct: 133 IEGRIISRIKGGMTVDVGLKAFLPGSQIDLRPVRDMDRLIGQTIQVRIIKMNKKRGNIIV 192
Query: 326 SMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
S R E +K+ M L+ G++++ +K IT +G F +L G+ L+H +++SW
Sbjct: 193 SRRVLLEEWRDRRKKVTMDALKEGEILEGIVKNITDYGAFIDLGGIDGLLHITDMSW 249
[212][TOP]
>UniRef100_B5HQP6 30S ribosomal protein S1 n=1 Tax=Streptomyces sviceus ATCC 29083
RepID=B5HQP6_9ACTO
Length = 503
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 121 KIKEEDGIVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKELEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E ++T + L+ G V + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRQTFLTTLQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[213][TOP]
>UniRef100_B5HG74 30S ribosomal protein S1 n=1 Tax=Streptomyces pristinaespiralis
ATCC 25486 RepID=B5HG74_STRPR
Length = 500
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 121 KIKEEDGIVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKELEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E ++T + L+ G V + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRQTFLTTLQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[214][TOP]
>UniRef100_B5GXK8 30S ribosomal protein S1 n=1 Tax=Streptomyces clavuligerus ATCC
27064 RepID=B5GXK8_STRCL
Length = 496
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 120 KIKEEDGIVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKELEAKIIELD 179
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E ++T + L+ G V + I FG F +L GV LVH
Sbjct: 180 KNRNNVVLSRRAWLEQTQSEVRQTFLTTLQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHV 239
Query: 482 SEVSW 496
SE+SW
Sbjct: 240 SELSW 244
[215][TOP]
>UniRef100_B5GJ32 30S ribosomal protein S1 n=1 Tax=Streptomyces sp. SPB74
RepID=B5GJ32_9ACTO
Length = 504
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 121 KIKEEDGIVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKELEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E ++T + L+ G V + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRQTFLTTLQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[216][TOP]
>UniRef100_B4V7Z5 30S ribosomal protein S1 n=1 Tax=Streptomyces sp. Mg1
RepID=B4V7Z5_9ACTO
Length = 503
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 121 KIKEEDGIVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKELEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E ++T + L+ G V + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRQTFLTTLQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[217][TOP]
>UniRef100_B1QKP2 Ribosomal protein S1 n=1 Tax=Clostridium botulinum Bf
RepID=B1QKP2_CLOBO
Length = 387
Score = 57.4 bits (137), Expect = 5e-07
Identities = 26/89 (29%), Positives = 51/89 (57%)
Frame = +2
Query: 230 DREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVK 409
D + K L+ F G+ +K ++ ++ RK++ S R + +EE ++K L L G ++
Sbjct: 143 DNKYVKDLNVFKGEIVKGRLIELDKQKRKVVLSSRVVKEKEEAKRKEELWNSLEKGQKIE 202
Query: 410 CCIKKITYFGIFCELEGVPALVHQSEVSW 496
++++ FG F ++ G+ LVH S++SW
Sbjct: 203 GVVRRLEKFGAFVDIGGMDGLVHNSQLSW 231
[218][TOP]
>UniRef100_B0ND30 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC
35704 RepID=B0ND30_EUBSP
Length = 373
Score = 57.4 bits (137), Expect = 5e-07
Identities = 31/85 (36%), Positives = 49/85 (57%)
Frame = +2
Query: 242 QKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIK 421
+K LS + Q+I+ + N ++I R E EK++ L A+L+VGD ++ +K
Sbjct: 143 EKDLSKYQDQEIEFVISEFNPRRNRVIGDRRQLLVAERAEKQKELFARLQVGDRMEGTVK 202
Query: 422 KITYFGIFCELEGVPALVHQSEVSW 496
+T FG F +L GV L+H SE+SW
Sbjct: 203 NVTDFGAFIDLGGVDGLLHISEMSW 227
[219][TOP]
>UniRef100_A3ER46 Ribosomal protein S1 n=1 Tax=Leptospirillum rubarum
RepID=A3ER46_9BACT
Length = 475
Score = 57.4 bits (137), Expect = 5e-07
Identities = 30/117 (25%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Frame = +2
Query: 152 LDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIF 325
++ + + I G ++ D+ L+ L D + + +GQ I+V ++ N+ +I
Sbjct: 17 IEGRIISRIKGGMTVDVGLKAFLPGSQIDLRPVRDMDRLIGQTIQVRIIKMNKKRGNIIV 76
Query: 326 SMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
S R E +K+ M L+ G++++ +K IT +G F +L G+ L+H +++SW
Sbjct: 77 SRRVLLEEWRDRRKKVTMDALKEGEILEGIVKNITDYGAFIDLGGIDGLLHITDMSW 133
[220][TOP]
>UniRef100_Q04U40 30S Ribosomal protein S1 n=2 Tax=Leptospira borgpetersenii serovar
Hardjo-bovis RepID=Q04U40_LEPBJ
Length = 560
Score = 57.0 bits (136), Expect = 7e-07
Identities = 26/80 (32%), Positives = 47/80 (58%)
Frame = +2
Query: 257 SFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYF 436
+F ++++ ++ N +R + S + +E EK L+ K +VGD VK + KI F
Sbjct: 151 TFKNKELEFKIIELNDRTRSGVVSRKKLLDEVNEEKWDALLLKFKVGDKVKSVVSKIASF 210
Query: 437 GIFCELEGVPALVHQSEVSW 496
G+FCE++GV L+ Q ++S+
Sbjct: 211 GVFCEVDGVTGLLRQRDISY 230
[221][TOP]
>UniRef100_B3EMH2 RNA binding S1 domain protein n=1 Tax=Chlorobium phaeobacteroides
BS1 RepID=B3EMH2_CHLPB
Length = 591
Score = 57.0 bits (136), Expect = 7e-07
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 17/161 (10%)
Frame = +2
Query: 65 GVDPSPYRQNLGVIGGQDVTSKSPSP-----DSSLDS-EVATTINGEVSSDMK------- 205
G + Y +N+ GQ + SK + D DS E T ING++ + +K
Sbjct: 91 GDEVEVYLENIEDKMGQLILSKRKADVLRIWDKIYDSIENDTIINGKIINRVKGGMTVSL 150
Query: 206 --LEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRT 373
+E L D + + + VGQ + VV N ++ ++ S + EE K+
Sbjct: 151 SGVEAFLPGSQIDVKPVRDFDALVGQTMDFRVVKINPVTQNIVVSHKVILEEEYAAKREE 210
Query: 374 LMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++A ++VG +++ +K IT FGIF +L G+ LVH ++++W
Sbjct: 211 MLANIKVGMILEGSVKNITDFGIFVDLGGLDGLVHITDITW 251
[222][TOP]
>UniRef100_C7NHH3 SSU ribosomal protein S1P n=1 Tax=Kytococcus sedentarius DSM 20547
RepID=C7NHH3_KYTSD
Length = 492
Score = 57.0 bits (136), Expect = 7e-07
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRK 316
D + V + G + D+ L L + + + + L +VGQ+I+ ++ ++N
Sbjct: 120 DGVVTGSVIEVVKGGLIVDIGLRGFLPASLVEMRRVRDLQPYVGQEIEAKIIELDKNRNN 179
Query: 317 LIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ S R + + E + + + +L+ G V + I FG F +L GV LVH SE+SW
Sbjct: 180 VVLSRRAWLEQTQSEVRTSFLKELQRGQVRPGVVSSIVNFGAFVDLGGVDGLVHVSELSW 239
[223][TOP]
>UniRef100_C4DI35 SSU ribosomal protein S1P n=1 Tax=Stackebrandtia nassauensis DSM
44728 RepID=C4DI35_9ACTO
Length = 507
Score = 57.0 bits (136), Expect = 7e-07
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++++ ++ +
Sbjct: 126 KIKEEDGVVRGSVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGRELEAKIIELD 185
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E + + KL G V K + I FG F +L GV LVH
Sbjct: 186 KNRNNVVLSRRSWLEQTQSEVRTEFLNKLAKGQVRKGVVSSIVNFGAFVDLGGVDGLVHV 245
Query: 482 SEVSW 496
SE+SW
Sbjct: 246 SELSW 250
[224][TOP]
>UniRef100_A6DTL4 30S ribosomal protein S1 (Fragment) n=1 Tax=Lentisphaera araneosa
HTCC2155 RepID=A6DTL4_9BACT
Length = 455
Score = 57.0 bits (136), Expect = 7e-07
Identities = 26/82 (31%), Positives = 47/82 (57%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKIT 430
L F+ Q+ + ++ N++ +I S R E E+K L+ +++GDV+ +K IT
Sbjct: 148 LDDFLNQEYEFKILKINQDKNNIIISRRELLEEAREEQKDALLKVIKIGDVLPGKVKNIT 207
Query: 431 YFGIFCELEGVPALVHQSEVSW 496
FG F +L G+ L+H +++SW
Sbjct: 208 DFGAFIDLNGMDGLLHITDMSW 229
[225][TOP]
>UniRef100_Q4L6I1 30S ribosomal protein S1 n=1 Tax=Staphylococcus haemolyticus
JCSC1435 RepID=RS1_STAHJ
Length = 392
Score = 57.0 bits (136), Expect = 7e-07
Identities = 30/80 (37%), Positives = 46/80 (57%)
Frame = +2
Query: 254 SSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITY 433
S F GQ I++ V + + ++I S + E E KK +L+ L GDV+K + ++T
Sbjct: 147 SVFDGQTIRIKVEELDPENNRVILSRKAVEQAENDVKKASLLESLNAGDVIKGKVARLTN 206
Query: 434 FGIFCELEGVPALVHQSEVS 493
FG F ++ GV LVH SE+S
Sbjct: 207 FGAFVDIGGVDGLVHVSELS 226
[226][TOP]
>UniRef100_UPI0001AF41F3 30S ribosomal protein S1 n=1 Tax=Mycobacterium kansasii ATCC 12478
RepID=UPI0001AF41F3
Length = 481
Score = 56.6 bits (135), Expect = 9e-07
Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRK 316
D ++ V + G + D+ L L + + + + L ++G++I+ ++ ++N
Sbjct: 123 DEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNN 182
Query: 317 LIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ S R + + E + + +L+ G + K + I FG F +L GV LVH SE+SW
Sbjct: 183 VVLSRRAWLEQTQSEVRSEFLNQLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSW 242
[227][TOP]
>UniRef100_UPI000192EFD9 hypothetical protein PREVCOP_03040 n=1 Tax=Prevotella copri DSM
18205 RepID=UPI000192EFD9
Length = 594
Score = 56.6 bits (135), Expect = 9e-07
Identities = 24/79 (30%), Positives = 49/79 (62%)
Frame = +2
Query: 260 FVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFG 439
FVG+ ++ VV N+ R ++ S + +E ++++ ++ KL G +++ +K IT +G
Sbjct: 168 FVGKTMEFKVVKINQEFRNVVVSHKALIEQELEQQRKEIIGKLEKGQILEGTVKNITTYG 227
Query: 440 IFCELEGVPALVHQSEVSW 496
+F +L GV L+H +++SW
Sbjct: 228 VFVDLGGVDGLIHITDLSW 246
[228][TOP]
>UniRef100_Q04AY7 SSU ribosomal protein S1P n=1 Tax=Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365 RepID=Q04AY7_LACDB
Length = 401
Score = 56.6 bits (135), Expect = 9e-07
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
Frame = +2
Query: 155 DSEVATTINGEVSSDMKLEDLLMVYDRE-------KQKFLSS---FVGQKIKVNVVMANR 304
D E TI G+V+S ++ L+ V R +F+S ++G+ IKV + +
Sbjct: 107 DFEEGKTIEGKVTSSVRGGLLVDVGTRGFLPASLISNRFVSDLKPYIGKTIKVKITEIDP 166
Query: 305 NSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQS 484
+LI S + EE + + ++L VGDVV+ + ++T FG F ++ GV LVH S
Sbjct: 167 AKNRLILSHKELIEEEREQAFENVASQLVVGDVVEGRVSRLTNFGSFVDIGGVDGLVHIS 226
Query: 485 EVSW 496
E+S+
Sbjct: 227 EISY 230
[229][TOP]
>UniRef100_C1FAB9 Ribosomal protein S1 n=1 Tax=Acidobacterium capsulatum ATCC 51196
RepID=C1FAB9_ACIC5
Length = 637
Score = 56.6 bits (135), Expect = 9e-07
Identities = 30/129 (23%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Frame = +2
Query: 116 DVTSKSPSPDSSLDSEVATTINGEVSSDMKLEDLLMVYDREKQ--KFLSSFVGQKIKVNV 289
D K+ + + + VA + G ++ D+ ++ L E + + L +++GQ I+V V
Sbjct: 180 DTIEKAANEKTPVTGIVAGRVKGGLTVDIGIKAFLPGSQLEIRPVRNLDAYIGQPIEVRV 239
Query: 290 VMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPA 469
+ N+ ++ S + EE+ K+ + L G ++ +K +T +G F ++ G+
Sbjct: 240 IKLNKKRGNVVVSRKEILEEEQTAKRSETLEHLEEGSILTGTVKNLTDYGAFVDMGGIDG 299
Query: 470 LVHQSEVSW 496
L+H +++SW
Sbjct: 300 LLHITDMSW 308
[230][TOP]
>UniRef100_B3EFF9 RNA binding S1 domain protein n=1 Tax=Chlorobium limicola DSM 245
RepID=B3EFF9_CHLL2
Length = 586
Score = 56.6 bits (135), Expect = 9e-07
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 17/161 (10%)
Frame = +2
Query: 65 GVDPSPYRQNLGVIGGQDVTSKSPSP-----DSSLDS-EVATTINGEVSSDMK------- 205
G + Y +N+ GQ + SK + D DS E T ING++ + +K
Sbjct: 91 GDEVEVYLENIEDKMGQLILSKKKADVLRIWDKIYDSIENDTIINGKIINRVKGGMTVSL 150
Query: 206 --LEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRT 373
+E L D + + + VGQ + VV N ++ ++ S + EE ++
Sbjct: 151 SGVEAFLPGSQIDVKPVRDFDALVGQTMDFRVVKINPVTQNIVVSHKVILEEEYAARREE 210
Query: 374 LMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++A ++VG V++ +K IT FGIF +L G+ LVH ++++W
Sbjct: 211 MLANIKVGMVLEGTVKNITDFGIFVDLGGLDGLVHITDITW 251
[231][TOP]
>UniRef100_B1MAV6 30S ribosomal protein S1 n=1 Tax=Mycobacterium abscessus ATCC 19977
RepID=B1MAV6_MYCA9
Length = 481
Score = 56.6 bits (135), Expect = 9e-07
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRK 316
D ++ V + G + D+ L L + + + + L ++G++I+ ++ +RN
Sbjct: 123 DEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDRNRNN 182
Query: 317 LIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ S R + + E + + +L G + K + I FG F +L GV LVH SE+SW
Sbjct: 183 VVLSRRAWLEQTQSEVRSEFLNQLTKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSW 242
[232][TOP]
>UniRef100_A9KLR6 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Clostridium
phytofermentans ISDg RepID=A9KLR6_CLOPH
Length = 643
Score = 56.6 bits (135), Expect = 9e-07
Identities = 30/85 (35%), Positives = 48/85 (56%)
Frame = +2
Query: 242 QKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIK 421
+K L F Q+I+ + N R++I + ++ E + L AK++VGDVV+ +K
Sbjct: 426 EKNLDKFKDQEIEFVISEFNPKRRRIIGDRKQLLVAKKQELSKALFAKIKVGDVVEGTVK 485
Query: 422 KITYFGIFCELEGVPALVHQSEVSW 496
+T FG F +L G L+H SE+SW
Sbjct: 486 NVTDFGAFIDLGGADGLLHISEMSW 510
[233][TOP]
>UniRef100_A1ANQ0 SSU ribosomal protein S1P n=1 Tax=Pelobacter propionicus DSM 2379
RepID=A1ANQ0_PELPD
Length = 579
Score = 56.6 bits (135), Expect = 9e-07
Identities = 26/80 (32%), Positives = 44/80 (55%)
Frame = +2
Query: 257 SFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYF 436
S++G K V+ N+ ++ S R +EE + +AKL G +V+ +K +T +
Sbjct: 166 SYIGLTSKFKVIKLNQRRDNIVLSRRAILDEERAASRDVTLAKLEEGQIVEGVVKNVTEY 225
Query: 437 GIFCELEGVPALVHQSEVSW 496
G F +L GV L+H S++SW
Sbjct: 226 GAFVDLGGVDGLLHVSDLSW 245
[234][TOP]
>UniRef100_A0PYK4 RpsA n=1 Tax=Clostridium novyi NT RepID=A0PYK4_CLONN
Length = 387
Score = 56.6 bits (135), Expect = 9e-07
Identities = 26/85 (30%), Positives = 50/85 (58%)
Frame = +2
Query: 245 KFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKK 424
K + F+G+ +KV V+ + K++ S + E +E KK+ ++A L+ G+ +++
Sbjct: 151 KDVKVFLGKTLKVKVIEFDGKKNKVVLSAKEVELKEIENKKQKVLASLKKGEKRSGVVRR 210
Query: 425 ITYFGIFCELEGVPALVHQSEVSWD 499
+ FG F +L GV L+H S++SW+
Sbjct: 211 LAKFGAFVDLGGVDGLIHNSDLSWE 235
[235][TOP]
>UniRef100_A0PP44 Ribosomal protein S1 RpsA n=2 Tax=Mycobacterium RepID=A0PP44_MYCUA
Length = 481
Score = 56.6 bits (135), Expect = 9e-07
Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRK 316
D ++ V + G + D+ L L + + + + L ++G++I+ ++ ++N
Sbjct: 123 DEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNN 182
Query: 317 LIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ S R + + E + + +L+ G + K + I FG F +L GV LVH SE+SW
Sbjct: 183 VVLSRRAWLEQTQSEVRSEFLNQLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSW 242
[236][TOP]
>UniRef100_C9LUH9 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Selenomonas
sputigena ATCC 35185 RepID=C9LUH9_9FIRM
Length = 373
Score = 56.6 bits (135), Expect = 9e-07
Identities = 25/84 (29%), Positives = 49/84 (58%)
Frame = +2
Query: 245 KFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKK 424
K LS +VGQ ++ + + ++L+ S R EE +K+ + +KL VG +++ +K+
Sbjct: 142 KDLSIYVGQTVEALPIEIDIRKQRLVLSRRSLLEEEREKKQEEVFSKLEVGQIIRGTVKR 201
Query: 425 ITYFGIFCELEGVPALVHQSEVSW 496
+ +G F ++ GV L H S+++W
Sbjct: 202 LVEYGAFIDIGGVDGLAHISDLAW 225
[237][TOP]
>UniRef100_C9K8C2 SSU ribosomal protein S1P n=1 Tax=Sanguibacter keddieii DSM 10542
RepID=C9K8C2_9MICO
Length = 496
Score = 56.6 bits (135), Expect = 9e-07
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++I+ ++ +
Sbjct: 120 KIKEEDGVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKEIEAKIIELD 179
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E + T + L+ G V + I FG F +L GV LVH
Sbjct: 180 KNRNNVVLSRRAWLEQTQSEVRSTFLQTLQKGQVRPGVVSSIVNFGAFVDLGGVDGLVHV 239
Query: 482 SEVSW 496
SE+SW
Sbjct: 240 SELSW 244
[238][TOP]
>UniRef100_C7R428 RNA binding S1 domain protein n=1 Tax=Jonesia denitrificans DSM
20603 RepID=C7R428_JONDD
Length = 488
Score = 56.6 bits (135), Expect = 9e-07
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++I+ ++ +
Sbjct: 115 KIKEEDGVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKEIEAKIIELD 174
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E + T + L+ G V + I FG F +L GV LVH
Sbjct: 175 KNRNNVVLSRRAWLEQTQSEVRSTFLQTLQKGQVRPGVVSSIVNFGAFVDLGGVDGLVHV 234
Query: 482 SEVSW 496
SE+SW
Sbjct: 235 SELSW 239
[239][TOP]
>UniRef100_C6RFX6 S1 RNA binding domain protein n=1 Tax=Campylobacter showae RM3277
RepID=C6RFX6_9PROT
Length = 556
Score = 56.6 bits (135), Expect = 9e-07
Identities = 27/84 (32%), Positives = 51/84 (60%)
Frame = +2
Query: 245 KFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKK 424
K ++ VG+ KV V+ +++ + +I S + +E+ +K+ + A DV++ +KK
Sbjct: 153 KDANAVVGKSFKVKVIKIDKDEQSIIVSRKKLLDEDRKKKREVISAVAENTDVIEGVVKK 212
Query: 425 ITYFGIFCELEGVPALVHQSEVSW 496
IT +G+F ++ GV LVH SE+S+
Sbjct: 213 ITTYGMFVDVGGVDGLVHYSEISY 236
[240][TOP]
>UniRef100_C6PTP2 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Clostridium
carboxidivorans P7 RepID=C6PTP2_9CLOT
Length = 641
Score = 56.6 bits (135), Expect = 9e-07
Identities = 28/84 (33%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Frame = +2
Query: 251 LSSFVGQKIKVNVV--MANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKK 424
LSS++G++++VN++ +R R+++ S R E+ K+ L VV+ +K+
Sbjct: 427 LSSYIGKELEVNIIEFKEDRKGRRIVASRRELLKSEKEVKEEGTWNSLEKDTVVEGEVKR 486
Query: 425 ITYFGIFCELEGVPALVHQSEVSW 496
+T FG F +++GV L+H SE+SW
Sbjct: 487 LTNFGAFVDVQGVDGLLHVSEISW 510
[241][TOP]
>UniRef100_C2KPV0 30S ribosomal protein S1 n=1 Tax=Mobiluncus mulieris ATCC 35243
RepID=C2KPV0_9ACTO
Length = 489
Score = 56.6 bits (135), Expect = 9e-07
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L+ ++G++++ ++ +
Sbjct: 119 KIKEADGVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLAPYIGRQLETKIIELD 178
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E + T ++ L+ G V + I FG F +L GV LVH
Sbjct: 179 KNRNNVVLSRRAFLEQTQSEVRTTFLSTLQKGQVRTGVVSSIVNFGAFVDLGGVDGLVHV 238
Query: 482 SEVSW 496
SE+SW
Sbjct: 239 SELSW 243
[242][TOP]
>UniRef100_C1RKW3 SSU ribosomal protein S1P n=1 Tax=Cellulomonas flavigena DSM 20109
RepID=C1RKW3_9CELL
Length = 492
Score = 56.6 bits (135), Expect = 9e-07
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++I+ ++ +
Sbjct: 121 KIKEEDGVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKEIEAKIIELD 180
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E + T + L+ G V + I FG F +L GV LVH
Sbjct: 181 KNRNNVVLSRRAWLEQTQSEVRSTFLQTLQKGQVRPGVVSSIVNFGAFVDLGGVDGLVHV 240
Query: 482 SEVSW 496
SE+SW
Sbjct: 241 SELSW 245
[243][TOP]
>UniRef100_C0V6R1 SSU ribosomal protein S1P n=1 Tax=Xylanimonas cellulosilytica DSM
15894 RepID=C0V6R1_9MICO
Length = 490
Score = 56.6 bits (135), Expect = 9e-07
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Frame = +2
Query: 128 KSPSPDSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMAN 301
K D + V + G + D+ L L + + + + L +VG++I+ ++ +
Sbjct: 119 KIKEEDGVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKEIEAKIIELD 178
Query: 302 RNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQ 481
+N ++ S R + + E + T + L+ G V + I FG F +L GV LVH
Sbjct: 179 KNRNNVVLSRRAWLEQTQSEVRSTFLQTLQKGQVRPGVVSSIVNFGAFVDLGGVDGLVHV 238
Query: 482 SEVSW 496
SE+SW
Sbjct: 239 SELSW 243
[244][TOP]
>UniRef100_C5V846 30S ribosomal protein S1 n=2 Tax=Corynebacterium matruchotii
RepID=C5V846_9CORY
Length = 493
Score = 56.6 bits (135), Expect = 9e-07
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRK 316
D ++ V + G + D+ L L + + + + L ++GQ+I+ ++ ++
Sbjct: 121 DEAVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLDPYIGQQIEAKIIELDKQRNN 180
Query: 317 LIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ S R + + E + + +L+ G V K + I FG F +L GV LVH SE+SW
Sbjct: 181 VVLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSW 240
[245][TOP]
>UniRef100_B2KT97 S1 ribosomal protein n=1 Tax=Mycobacterium abscessus
RepID=B2KT97_MYCAB
Length = 481
Score = 56.6 bits (135), Expect = 9e-07
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRK 316
D ++ V + G + D+ L L + + + + L ++G++I+ ++ +RN
Sbjct: 123 DEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDRNRNN 182
Query: 317 LIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ S R + + E + + +L G + K + I FG F +L GV LVH SE+SW
Sbjct: 183 VVLSRRAWLEQTQSEVRSEFLNQLTKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSW 242
[246][TOP]
>UniRef100_Q97I09 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1
Tax=Clostridium acetobutylicum RepID=ISPH_CLOAB
Length = 642
Score = 56.6 bits (135), Expect = 9e-07
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Frame = +2
Query: 251 LSSFVGQKIKVNVVMANRNSR--KLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKK 424
L ++G+ V ++ + R K++ S R ++E+ + + T+ KL G VV+ +K+
Sbjct: 434 LKEYIGKSFDVAIIEYSTKKRQTKIVASRRALLSKEKEKVEETVWNKLEEGQVVEGEVKR 493
Query: 425 ITYFGIFCELEGVPALVHQSEVSW 496
+T FG F E+EGV L+H SE+SW
Sbjct: 494 LTDFGAFVEIEGVDGLLHVSEISW 517
[247][TOP]
>UniRef100_UPI0001B458AB 30S ribosomal protein S1 n=1 Tax=Mycobacterium intracellulare ATCC
13950 RepID=UPI0001B458AB
Length = 479
Score = 56.2 bits (134), Expect = 1e-06
Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Frame = +2
Query: 143 DSSLDSEVATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRK 316
D ++ V + G + D+ L L + + + + L ++G++I+ ++ ++N
Sbjct: 123 DEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNN 182
Query: 317 LIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
++ S R + + E + + +L+ G + K + I FG F +L GV LVH SE+SW
Sbjct: 183 VVLSRRAWLEQTQSEVRSEFLNQLQKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSW 242
[248][TOP]
>UniRef100_Q30ZT8 SSU ribosomal protein S1P n=1 Tax=Desulfovibrio desulfuricans
subsp. desulfuricans str. G20 RepID=Q30ZT8_DESDG
Length = 482
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 260 FVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFG 439
++GQ + + N R ++ S R ++ E ++ M L GDVV CI ++T FG
Sbjct: 154 YLGQTFQFMITRCENNGRNVVVSRRVLLEAQQEESRKEYMKTLNEGDVVDVCITRLTNFG 213
Query: 440 IFCEL-EGVPALVHQSEVSW 496
F EL GV L+H SE+ W
Sbjct: 214 AFAELAPGVEGLIHISELGW 233
[249][TOP]
>UniRef100_Q1GAK0 30S ribosomal protein S1 n=1 Tax=Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842 RepID=Q1GAK0_LACDA
Length = 401
Score = 56.2 bits (134), Expect = 1e-06
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
Frame = +2
Query: 155 DSEVATTINGEVSSDMKLEDLLMVYDRE-------KQKFLSS---FVGQKIKVNVVMANR 304
D E TI G+V+S ++ L+ V R +F+S ++G+ IKV + +
Sbjct: 107 DFEEGKTIEGKVTSSVRGGLLVDVGTRGFLPASLISNRFVSDLKPYIGKTIKVKITEIDP 166
Query: 305 NSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQS 484
+LI S + EE + + ++L VGDVV+ + ++T FG F ++ GV LVH S
Sbjct: 167 AKNRLILSHKELIEEEREQAFENVASQLVVGDVVEGRVSRLTDFGSFVDIGGVDGLVHIS 226
Query: 485 EVSW 496
E+S+
Sbjct: 227 EISY 230
[250][TOP]
>UniRef100_C6CUA2 RNA binding S1 domain protein n=1 Tax=Paenibacillus sp. JDR-2
RepID=C6CUA2_PAESJ
Length = 411
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/113 (27%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Frame = +2
Query: 164 VATTINGEVSSDMKLEDLL--MVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRP 337
VA + G + +D+ + + + +R + S + G+ ++V V +R + K+I S +
Sbjct: 116 VADVVKGGLVADVGVRGFIPASMVERHFVEDFSDYKGRTLRVKVKEIDRENNKVILSAKD 175
Query: 338 RENEEEVEKKRTLMAKLRVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSW 496
+ E + K+ ++A L+VG ++ ++++T FG F ++ G+ LVH SE+SW
Sbjct: 176 VLDAEFEQNKQHVIAGLQVGAQLEGTVQRLTPFGAFVDIGGIDGLVHVSELSW 228