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[1][TOP]
>UniRef100_Q93YQ0 Putative uncharacterized protein F10L8.3 n=1 Tax=Arabidopsis
thaliana RepID=Q93YQ0_ARATH
Length = 320
Score = 287 bits (734), Expect = 5e-76
Identities = 150/150 (100%), Positives = 150/150 (100%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY
Sbjct: 171 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 230
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV
Sbjct: 231 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 290
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
VSVSGKGRLKIGEINETKKGKFAVEIIRYL
Sbjct: 291 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 320
[2][TOP]
>UniRef100_A5B7P7 Putative uncharacterized protein n=2 Tax=Vitis vinifera
RepID=A5B7P7_VITVI
Length = 269
Score = 245 bits (625), Expect = 2e-63
Identities = 121/150 (80%), Positives = 141/150 (94%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAILGTGI+REKLGDI++Q EKGAQVLIVPELVDF+V++L+KVGNV V+C+K+PLLALEY
Sbjct: 120 GAILGTGIAREKLGDIILQGEKGAQVLIVPELVDFLVSSLEKVGNVSVSCTKMPLLALEY 179
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
E PRT +FKT+E SLR+DA+ASAGFK+SRSKLVDLIS+ DVRVNW TVTKNGT +KTGDV
Sbjct: 180 EEPRTTTFKTIELSLRVDALASAGFKLSRSKLVDLISNGDVRVNWTTVTKNGTTLKTGDV 239
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
VSVSGKGRLKIGEIN TKKGK+AVE+IR+L
Sbjct: 240 VSVSGKGRLKIGEINSTKKGKYAVELIRFL 269
[3][TOP]
>UniRef100_A7P1P0 Chromosome chr19 scaffold_4, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7P1P0_VITVI
Length = 412
Score = 240 bits (612), Expect = 8e-62
Identities = 117/150 (78%), Positives = 140/150 (93%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAILGTGI+REKLGDI++Q EKGAQVLIVPELVDF+V++L+KVGNV V+C+K+PLLALEY
Sbjct: 263 GAILGTGIAREKLGDIILQGEKGAQVLIVPELVDFLVSSLEKVGNVSVSCTKMPLLALEY 322
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
E PRT +FKT+E SLR+DA+ASAGFK+SRSKL++L+ + DVRVNW TVTKNGT +KTGDV
Sbjct: 323 EEPRTTTFKTIELSLRVDALASAGFKLSRSKLIELLFNGDVRVNWTTVTKNGTTLKTGDV 382
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
VSVSGKGRLKIGEIN TKKGK+AVE+IR+L
Sbjct: 383 VSVSGKGRLKIGEINSTKKGKYAVELIRFL 412
[4][TOP]
>UniRef100_B9HZV1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HZV1_POPTR
Length = 268
Score = 234 bits (597), Expect = 4e-60
Identities = 116/150 (77%), Positives = 136/150 (90%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAILGTGI+R KLGDI++ K AQVL+VP+LVD++V++LDKVG+V V+C+ IPL A+EY
Sbjct: 119 GAILGTGIARNKLGDIIVLGGKRAQVLLVPDLVDYIVSSLDKVGDVSVSCTPIPLHAIEY 178
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
EPPRT SFKTVEASLR+DA+ASAGFKISRSKLVDLIS+KDVRVNW T+TKN T +KTGDV
Sbjct: 179 EPPRTKSFKTVEASLRVDALASAGFKISRSKLVDLISNKDVRVNWTTITKNNTTLKTGDV 238
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
VSVSGKGRLKIGEIN T+KGKFAVE+I YL
Sbjct: 239 VSVSGKGRLKIGEINTTRKGKFAVELIHYL 268
[5][TOP]
>UniRef100_B7FL87 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=B7FL87_MEDTR
Length = 325
Score = 232 bits (591), Expect = 2e-59
Identities = 111/150 (74%), Positives = 137/150 (91%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+ILGTGI+REK+GDI++Q E+GAQ+++VPELV+F+ +ALDKV NV VTC+KIPL++L+Y
Sbjct: 176 GSILGTGIAREKVGDIILQGEQGAQIIVVPELVEFLTSALDKVRNVPVTCTKIPLISLDY 235
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
EPPRT SFKT+EASLR+DAVASAGFKISRSKLVD+IS+ DVR+NW +T GT VK+GD+
Sbjct: 236 EPPRTKSFKTIEASLRVDAVASAGFKISRSKLVDMISNGDVRINWIPITTKGTTVKSGDL 295
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
VSVSG GRLKIGE+N TKKGKFAVE+IRYL
Sbjct: 296 VSVSGLGRLKIGEVNTTKKGKFAVELIRYL 325
[6][TOP]
>UniRef100_B4F7Y6 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4F7Y6_MAIZE
Length = 304
Score = 229 bits (585), Expect = 1e-58
Identities = 113/150 (75%), Positives = 135/150 (90%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAILGTGI+REK+GDIL+Q E+GAQVL+ PELVD++++ L+KVG VGV+C++IPLLALEY
Sbjct: 155 GAILGTGITREKVGDILLQGERGAQVLVDPELVDYLISTLEKVGKVGVSCTQIPLLALEY 214
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
EPPRTNSFKTVE+SLR+DA+ASAGFKISR+KL LISS DVRVNW TKNG +K+GDV
Sbjct: 215 EPPRTNSFKTVESSLRVDALASAGFKISRTKLASLISSGDVRVNWTPTTKNGVTLKSGDV 274
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
VSVSG GRLKIGEI T+KGK+AVE+IRYL
Sbjct: 275 VSVSGMGRLKIGEIVTTRKGKYAVELIRYL 304
[7][TOP]
>UniRef100_C6TI80 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TI80_SOYBN
Length = 324
Score = 227 bits (579), Expect = 5e-58
Identities = 108/150 (72%), Positives = 136/150 (90%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+ILGTGI REKLGDI++Q E+GAQ+++VPELV+F+++ L KV NV V+C+KIPL++L+Y
Sbjct: 175 GSILGTGIVREKLGDIILQGEQGAQIIVVPELVEFLMSTLVKVRNVPVSCTKIPLISLDY 234
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
EPPRT SFKT+EASLR+DA+ASAGFK+SRSKLVD+IS+ DVR+NW VT GT +K+GD+
Sbjct: 235 EPPRTKSFKTIEASLRVDALASAGFKVSRSKLVDMISNGDVRINWIPVTTKGTTLKSGDI 294
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
VS+SGKGRLKIGEIN TKKGKFAVE+IRYL
Sbjct: 295 VSISGKGRLKIGEINSTKKGKFAVELIRYL 324
[8][TOP]
>UniRef100_C5XK23 Putative uncharacterized protein Sb03g034470 n=1 Tax=Sorghum
bicolor RepID=C5XK23_SORBI
Length = 304
Score = 227 bits (578), Expect = 7e-58
Identities = 112/150 (74%), Positives = 134/150 (89%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAILGTGI+REK+GDIL+Q E+GAQVL+ P LVD++++ L+KVG VGV+C++IPLLALEY
Sbjct: 155 GAILGTGITREKVGDILLQGERGAQVLVDPGLVDYLISTLEKVGKVGVSCTQIPLLALEY 214
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
EPPRTNSFKTVE+SLR+DA+ASAGFKISR+KL LISS DVRVNW TKNG +K+GDV
Sbjct: 215 EPPRTNSFKTVESSLRVDALASAGFKISRTKLASLISSGDVRVNWTPTTKNGVTLKSGDV 274
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
VSVSG GRLKIGEI T+KGK+AVE+IRYL
Sbjct: 275 VSVSGMGRLKIGEIVTTRKGKYAVELIRYL 304
[9][TOP]
>UniRef100_B6TPG8 RNA-binding S4 n=1 Tax=Zea mays RepID=B6TPG8_MAIZE
Length = 304
Score = 226 bits (577), Expect = 9e-58
Identities = 112/150 (74%), Positives = 134/150 (89%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAILGTGI+REK+GDIL+Q E+GAQVL+ PELVD++++ L+KVG VGV+C++IPLLALEY
Sbjct: 155 GAILGTGITREKVGDILLQGERGAQVLVDPELVDYLISTLEKVGKVGVSCTQIPLLALEY 214
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
EPPRTNSFKTVE+SLR+DA+ASAGFKISR+KL LISS DVRVNW TKNG +K+ DV
Sbjct: 215 EPPRTNSFKTVESSLRVDALASAGFKISRTKLASLISSGDVRVNWTPTTKNGVTLKSRDV 274
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
VSVSG GRLKIGEI T+KGK+AVE+IRYL
Sbjct: 275 VSVSGMGRLKIGEIVTTRKGKYAVELIRYL 304
[10][TOP]
>UniRef100_Q5JNI6 Os01g0747700 protein n=2 Tax=Oryza sativa Japonica Group
RepID=Q5JNI6_ORYSJ
Length = 305
Score = 222 bits (566), Expect = 2e-56
Identities = 109/150 (72%), Positives = 133/150 (88%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAILGTGI+R+K+GDIL+Q E+GAQVL+ PELVD++ + L+KVG VGV+C++IPLLALEY
Sbjct: 156 GAILGTGITRDKVGDILLQGERGAQVLVDPELVDYLTSTLEKVGKVGVSCTQIPLLALEY 215
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
EPPRT SFKTVE+SLR+DA+ SAGFKISR+KL LIS+ DVRVNW+ V+KNG +K GDV
Sbjct: 216 EPPRTKSFKTVESSLRVDALGSAGFKISRTKLASLISAGDVRVNWSPVSKNGVTLKAGDV 275
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
VSVSG GRLKIGEI T+KGK+AVE+IRYL
Sbjct: 276 VSVSGMGRLKIGEIVTTRKGKYAVELIRYL 305
[11][TOP]
>UniRef100_B8A9E7 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8A9E7_ORYSI
Length = 305
Score = 222 bits (566), Expect = 2e-56
Identities = 109/150 (72%), Positives = 133/150 (88%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAILGTGI+R+K+GDIL+Q E+GAQVL+ PELVD++ + L+KVG VGV+C++IPLLALEY
Sbjct: 156 GAILGTGITRDKVGDILLQGERGAQVLVDPELVDYLTSTLEKVGKVGVSCTQIPLLALEY 215
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
EPPRT SFKTVE+SLR+DA+ SAGFKISR+KL LIS+ DVRVNW+ V+KNG +K GDV
Sbjct: 216 EPPRTKSFKTVESSLRVDALGSAGFKISRTKLASLISAGDVRVNWSPVSKNGVTLKAGDV 275
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
VSVSG GRLKIGEI T+KGK+AVE+IRYL
Sbjct: 276 VSVSGMGRLKIGEIVTTRKGKYAVELIRYL 305
[12][TOP]
>UniRef100_A9NS86 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NS86_PICSI
Length = 332
Score = 218 bits (554), Expect = 4e-55
Identities = 102/150 (68%), Positives = 134/150 (89%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+L TGI REK+GDIL+Q EKGAQ+++VPELVD++V++L +V NV V+CS IPLLALE+
Sbjct: 183 GAVLATGIRREKVGDILLQGEKGAQIIVVPELVDYIVSSLTQVHNVPVSCSPIPLLALEF 242
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+PPRT K+VEASLR+DA+ASAGF++SRSKLV+LIS DVRVNW+ VTKNGT++KTGD+
Sbjct: 243 QPPRTKVLKSVEASLRVDAIASAGFQMSRSKLVNLISGGDVRVNWSEVTKNGTLLKTGDI 302
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
+S+ GKGR+++GEI T+KGKFAV++IRYL
Sbjct: 303 ISIKGKGRVQLGEIKTTRKGKFAVDLIRYL 332
[13][TOP]
>UniRef100_Q9LNN6 F8L10.3 protein n=1 Tax=Arabidopsis thaliana RepID=Q9LNN6_ARATH
Length = 773
Score = 211 bits (536), Expect = 5e-53
Identities = 116/139 (83%), Positives = 116/139 (83%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAILGTGISREKLGDILIQ VGNVGVTCSKIPLLALEY
Sbjct: 623 GAILGTGISREKLGDILIQ-----------------------VGNVGVTCSKIPLLALEY 659
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV
Sbjct: 660 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 719
Query: 250 VSVSGKGRLKIGEINETKK 194
VSVSGKGRLKIGEINETKK
Sbjct: 720 VSVSGKGRLKIGEINETKK 738
[14][TOP]
>UniRef100_B9EZN1 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9EZN1_ORYSJ
Length = 290
Score = 194 bits (494), Expect = 4e-48
Identities = 95/131 (72%), Positives = 116/131 (88%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAILGTGI+R+K+GDIL+Q E+GAQVL+ PELVD++ + L+KVG VGV+C++IPLLALEY
Sbjct: 156 GAILGTGITRDKVGDILLQGERGAQVLVDPELVDYLTSTLEKVGKVGVSCTQIPLLALEY 215
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
EPPRT SFKTVE+SLR+DA+ SAGFKISR+KL LIS+ DVRVNW+ V+KNG +K GDV
Sbjct: 216 EPPRTKSFKTVESSLRVDALGSAGFKISRTKLASLISAGDVRVNWSPVSKNGVTLKAGDV 275
Query: 250 VSVSGKGRLKI 218
VSVSG GRLKI
Sbjct: 276 VSVSGMGRLKI 286
[15][TOP]
>UniRef100_A9S0V3 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9S0V3_PHYPA
Length = 276
Score = 189 bits (480), Expect = 2e-46
Identities = 93/150 (62%), Positives = 124/150 (82%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+ILGTG++R+K+GDI++Q EKGAQ+L+VPELV+F ++L +V NV V S IPL AL+
Sbjct: 127 GSILGTGVTRDKVGDIIMQGEKGAQILVVPELVEFFCSSLVQVRNVAVQTSAIPLSALQV 186
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ PR ++FK+VEASLR+DA+ SAGF++SRSKL +LISS +VRVNW VTK +KTGDV
Sbjct: 187 KAPRVDTFKSVEASLRVDALTSAGFRMSRSKLAELISSGEVRVNWKEVTKTSLTLKTGDV 246
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
VSV GKGR+++GEI TKKG++AVE+ RYL
Sbjct: 247 VSVRGKGRIQVGEIVMTKKGRYAVELTRYL 276
[16][TOP]
>UniRef100_C1N282 Predicted protein (Fragment) n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N282_9CHLO
Length = 244
Score = 168 bits (425), Expect = 4e-40
Identities = 83/153 (54%), Positives = 114/153 (74%), Gaps = 3/153 (1%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTA---LDKVGNVGVTCSKIPLLA 440
GA+LGTGI R+++GDIL+Q E+GAQVL PE+ F+ A L V +V V C+ PL
Sbjct: 92 GAVLGTGIERDRVGDILVQGERGAQVLATPEMATFLSQARPALTSVRSVPVACAAAPLSD 151
Query: 439 LEYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKT 260
L PPR ++F +VEAS+R+DA+ASAGF++SRSK+ DL++S VRVNW K T+V T
Sbjct: 152 LRVPPPRVDAFNSVEASMRLDAIASAGFRMSRSKMSDLVTSGAVRVNWREGCKPKTVVAT 211
Query: 259 GDVVSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
GDV+S+ GKGR+++GE+ TKKGKF+V++ RYL
Sbjct: 212 GDVISLRGKGRVEVGEVETTKKGKFSVQLTRYL 244
[17][TOP]
>UniRef100_A8YHU1 Similar to tr|Q8YT36|Q8YT36 n=1 Tax=Microcystis aeruginosa PCC 7806
RepID=A8YHU1_MICAE
Length = 259
Score = 164 bits (415), Expect = 5e-39
Identities = 81/150 (54%), Positives = 111/150 (74%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+LGTGI REK+GDI++ E+GAQ ++VPEL DF+ L +V +V V S IPL AL+
Sbjct: 110 GAMLGTGIVREKVGDIIVLGERGAQAIVVPELADFLSANLRQVRSVPVKTSLIPLTALKV 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
PP+ TVEASLR+DA+ASAGF ISRSK+ + ISS DVRVNW ++++ VKTGD+
Sbjct: 170 RPPQKKEINTVEASLRLDAIASAGFGISRSKMAEAISSGDVRVNWKDISQSSYNVKTGDL 229
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
+S GKGRL++GE+ TKK ++ V + R++
Sbjct: 230 ISFRGKGRLEVGEVTVTKKERYRVHLTRFI 259
[18][TOP]
>UniRef100_B0JHA5 RNA-binding S4 n=1 Tax=Microcystis aeruginosa NIES-843
RepID=B0JHA5_MICAN
Length = 259
Score = 160 bits (406), Expect = 6e-38
Identities = 79/150 (52%), Positives = 110/150 (73%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+LGTGI REK+GDI++ E+GAQ ++VPEL DF+ L +V +V V S IPL L+
Sbjct: 110 GAMLGTGIVREKVGDIIVLGERGAQAIVVPELADFLSANLLQVRSVPVKTSPIPLTELKV 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
PP+ TVEASLR+DA+ASAGF ISRSK+ + IS+ DVRVNW ++++ VKTGD+
Sbjct: 170 RPPQKKEINTVEASLRLDAIASAGFGISRSKMAEAISAGDVRVNWKDISQSSYNVKTGDL 229
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
+S GKGRL++GE+ TKK ++ V + R++
Sbjct: 230 ISFRGKGRLEVGEVTVTKKERYRVHLTRFI 259
[19][TOP]
>UniRef100_Q5MZ42 Putative uncharacterized protein n=1 Tax=Synechococcus elongatus
PCC 6301 RepID=Q5MZ42_SYNP6
Length = 259
Score = 160 bits (404), Expect = 1e-37
Identities = 80/150 (53%), Positives = 110/150 (73%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G++LGTG+ REK+GDIL+ ++GAQ L++PELV+F+ L +V +V V +IPL L
Sbjct: 110 GSLLGTGLVREKVGDILVLGDRGAQALVMPELVEFLGLQLTQVRSVPVKVREIPLAELRI 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
PR TVEASLR+DA+ASAGF +SRSK+VDLIS +VRVNW T+ T +KTGD+
Sbjct: 170 PAPRIKQLTTVEASLRLDAIASAGFGLSRSKMVDLISRGEVRVNWKAATQPSTQLKTGDL 229
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
V+V GKGRL IG++ TKK ++ +E+ RY+
Sbjct: 230 VAVRGKGRLAIGDVQVTKKERYRLELTRYV 259
[20][TOP]
>UniRef100_B9YUT8 Photosystem II S4 domain protein n=1 Tax='Nostoc azollae' 0708
RepID=B9YUT8_ANAAZ
Length = 259
Score = 160 bits (404), Expect = 1e-37
Identities = 78/150 (52%), Positives = 111/150 (74%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAILGTGI REK GDI++ E+GAQV++VPEL +F+ +L +V +V V I + L+
Sbjct: 110 GAILGTGIVREKTGDIMVLGERGAQVIVVPELTEFLEMSLKQVRSVPVKTQPIDINELKI 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
P+ TVEASLR+DA+ASAGF +SRSK+VDLI S DVRVNW +T+ + +KTGD+
Sbjct: 170 REPKKKELTTVEASLRLDAIASAGFGMSRSKMVDLIDSGDVRVNWKEITQASSQLKTGDL 229
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
+++ GKGRL++GEI TKK ++ +++ RY+
Sbjct: 230 IAIPGKGRLEVGEITVTKKDRYRMQLTRYM 259
[21][TOP]
>UniRef100_B7KD11 Photosystem II S4 domain protein n=1 Tax=Cyanothece sp. PCC 7424
RepID=B7KD11_CYAP7
Length = 259
Score = 159 bits (402), Expect = 2e-37
Identities = 76/150 (50%), Positives = 111/150 (74%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+LGTGI R+K+GDI++ E+GAQ ++VPELVDF+ T+L +V +V V I L L+
Sbjct: 110 GAMLGTGIVRDKVGDIIVLGERGAQAIVVPELVDFLQTSLVQVRSVPVKTQPIELTDLKI 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
PP+ TVEAS+R+DA+ASAGF +SRSK+ + ISS DVRVNW +T +++GD+
Sbjct: 170 RPPKKKEMTTVEASMRLDAIASAGFGMSRSKMAEAISSGDVRVNWKEITSTSHNIQSGDL 229
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
+SV GKGRL++GE+ TKK ++ +++ RY+
Sbjct: 230 ISVRGKGRLEVGEVAVTKKERYRIQLTRYI 259
[22][TOP]
>UniRef100_Q31N36 RNA-binding S4 n=1 Tax=Synechococcus elongatus PCC 7942
RepID=Q31N36_SYNE7
Length = 259
Score = 159 bits (401), Expect = 2e-37
Identities = 79/150 (52%), Positives = 110/150 (73%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G++LGTG+ REK+GDIL+ ++GAQ L++PELV+F+ L +V +V V +IPL L
Sbjct: 110 GSLLGTGLVREKVGDILVLGDRGAQALVMPELVEFLGLQLTQVRSVPVKVREIPLAELRI 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
PR TVEASLR+DA+ASAGF +SRSK+VDLI+ +VRVNW T+ T +KTGD+
Sbjct: 170 PAPRIKQLTTVEASLRLDAIASAGFGLSRSKMVDLINRGEVRVNWKAATQPSTQLKTGDL 229
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
V+V GKGRL IG++ TKK ++ +E+ RY+
Sbjct: 230 VAVRGKGRLAIGDVQVTKKERYRLELTRYV 259
[23][TOP]
>UniRef100_Q3MEF0 RNA-binding S4 n=1 Tax=Anabaena variabilis ATCC 29413
RepID=Q3MEF0_ANAVT
Length = 259
Score = 158 bits (400), Expect = 3e-37
Identities = 79/150 (52%), Positives = 110/150 (73%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+LGTGI REK GDI++ E+GAQ ++VPEL +F+ L++V +V V I L L+
Sbjct: 110 GAMLGTGIVREKTGDIIVLGERGAQAIVVPELAEFLQIHLNQVRSVPVKTQPIELAELKV 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
P+ TVEASLR+DA+ASAGF +SRSK+VDLI S DVRVNW VT+ + VK+GD+
Sbjct: 170 REPKKKELTTVEASLRLDAIASAGFGMSRSKMVDLIDSGDVRVNWKEVTQASSQVKSGDL 229
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
+++ GKGRL++GEI TKK ++ V++ RY+
Sbjct: 230 IAIRGKGRLEVGEIAVTKKERYRVQLTRYM 259
[24][TOP]
>UniRef100_C7QX48 Photosystem II S4 domain protein n=2 Tax=Cyanothece
RepID=C7QX48_CYAP0
Length = 259
Score = 157 bits (398), Expect = 5e-37
Identities = 76/149 (51%), Positives = 112/149 (75%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAILGTGI REK+GDI++ E+GAQV++VPE+V+F+ T+L +V +V V I L L+
Sbjct: 110 GAILGTGIVREKIGDIIVLGERGAQVIVVPEMVNFLETSLVQVRSVPVKVQLIDLSELKI 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
PP+T TVEAS+R+DA+ASAGF ISRSK+ + IS+ DVRVNW +T+ V++GD+
Sbjct: 170 RPPKTKEMNTVEASMRLDAIASAGFGISRSKMAEAISAGDVRVNWKEITQASYNVQSGDL 229
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRY 164
++ GKGRL++GE+ TKK ++ +++ R+
Sbjct: 230 ITFRGKGRLEVGEVAVTKKERYRIQLTRF 258
[25][TOP]
>UniRef100_B4AYM3 Photosystem II S4 domain protein n=1 Tax=Cyanothece sp. PCC 7822
RepID=B4AYM3_9CHRO
Length = 259
Score = 157 bits (398), Expect = 5e-37
Identities = 76/150 (50%), Positives = 112/150 (74%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+LGTG+ REK+GDI++ E+GAQ ++VPELV+F+ T+L +V +V V +I L L+
Sbjct: 110 GAMLGTGLVREKVGDIIVLGERGAQAIVVPELVEFLETSLVQVRSVPVKTERIELTDLKV 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
PP+ TVEAS+R+DA+ASAGF +SRSK+ + ISS DVRVNW +T+ V +GD+
Sbjct: 170 RPPQKKEMTTVEASMRLDAIASAGFGMSRSKMAEAISSGDVRVNWKEITQASHNVSSGDL 229
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
+S+ GKGRL++GE+ TKK ++ V++ RY+
Sbjct: 230 ISMRGKGRLEVGEVAVTKKERYRVQLTRYI 259
[26][TOP]
>UniRef100_Q8YT36 Alr2890 protein n=1 Tax=Nostoc sp. PCC 7120 RepID=Q8YT36_ANASP
Length = 259
Score = 157 bits (396), Expect = 8e-37
Identities = 78/150 (52%), Positives = 109/150 (72%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+LGTGI REK GDI++ E+GAQ ++VPEL +F+ L++V +V V I L L+
Sbjct: 110 GAMLGTGIVREKTGDIIVLGERGAQAIVVPELAEFLQIHLNQVRSVPVKTQPIELTELKV 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
P+ TVEASLR+DA+ASAGF +SRSK+VD I S DVRVNW VT+ + VK+GD+
Sbjct: 170 REPKKKELTTVEASLRLDAIASAGFGMSRSKMVDFIDSGDVRVNWKEVTQASSQVKSGDL 229
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
+++ GKGRL++GEI TKK ++ V++ RY+
Sbjct: 230 IAIRGKGRLEVGEIAVTKKERYRVQLTRYM 259
[27][TOP]
>UniRef100_B1WVU9 Putative RNA-binding S4 protein n=1 Tax=Cyanothece sp. ATCC 51142
RepID=B1WVU9_CYAA5
Length = 259
Score = 157 bits (396), Expect = 8e-37
Identities = 76/148 (51%), Positives = 111/148 (75%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAIL TGI R+K+GDI++ E+G QV++VPELV+F+ T+L +V +V V +I L L+
Sbjct: 110 GAILATGIVRDKIGDIIVLGERGGQVIVVPELVEFLETSLTQVRSVPVKTQRIELSELKI 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
PP+T TVEAS+R+DA+ASAGF +SRSK+VD I+ DVRVNW +T+ V++GD+
Sbjct: 170 RPPKTKEMTTVEASMRLDAIASAGFGMSRSKMVDAINKGDVRVNWKEITQASHNVESGDL 229
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIR 167
++V GKGRL+IGE+ TKK ++ +++ R
Sbjct: 230 IAVRGKGRLEIGEVAITKKQRYRIQLTR 257
[28][TOP]
>UniRef100_A3IGZ9 RNA-binding S4 n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IGZ9_9CHRO
Length = 259
Score = 157 bits (396), Expect = 8e-37
Identities = 75/149 (50%), Positives = 110/149 (73%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAIL TGI R+K+GDI++ E+G QV+IVPELV+F+ T+L +V +V V I L L+
Sbjct: 110 GAILATGIVRDKIGDIIVLGERGGQVIIVPELVEFLETSLTQVRSVPVKTQSIELSELKI 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
PP+T TVEAS+R+DA+ASAGF +SRSK+VD I+ DVRVNW +T+ +++GD+
Sbjct: 170 RPPKTKEMTTVEASMRLDAIASAGFGMSRSKMVDAINKGDVRVNWKEITQASHNIESGDL 229
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRY 164
++V GKGRL++GE+ TKK ++ + + R+
Sbjct: 230 IAVRGKGRLEVGEVGITKKQRYRIHLTRF 258
[29][TOP]
>UniRef100_B9T6N6 RNA binding protein, putative n=1 Tax=Ricinus communis
RepID=B9T6N6_RICCO
Length = 231
Score = 157 bits (396), Expect = 8e-37
Identities = 75/96 (78%), Positives = 91/96 (94%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+ILGTGISREK+GDI++Q EKGAQ+L VPELVDF++++LDKVGNV V+C++IPLLALEY
Sbjct: 135 GSILGTGISREKVGDIILQGEKGAQILTVPELVDFIMSSLDKVGNVSVSCARIPLLALEY 194
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLI 323
EPPRT +F T+EASLR+DA+ASAGFKISRSKLVDLI
Sbjct: 195 EPPRTRTFNTIEASLRVDALASAGFKISRSKLVDLI 230
[30][TOP]
>UniRef100_Q4C0K5 RNA-binding S4 n=1 Tax=Crocosphaera watsonii WH 8501
RepID=Q4C0K5_CROWT
Length = 275
Score = 155 bits (393), Expect = 2e-36
Identities = 75/149 (50%), Positives = 111/149 (74%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAIL TGI REK+GDI++ E+G QV++VPELV+F+ T+L +V +V V +I L L+
Sbjct: 126 GAILATGIVREKIGDIIVLGERGGQVIVVPELVEFLETSLTQVRSVPVKTQQIELSELKI 185
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
PP+T TVEAS+R+DA+ASAGF +SRSK+ D I+ DVRVNW +++ VK+GD+
Sbjct: 186 RPPKTKEMTTVEASMRLDAIASAGFGMSRSKMSDAINRGDVRVNWKETSQSSYNVKSGDL 245
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRY 164
++V GKGRL++GE+ TKK ++ +++ R+
Sbjct: 246 ITVRGKGRLEVGEVAITKKQRYRIQLTRF 274
[31][TOP]
>UniRef100_A8IJH5 Predicted protein n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IJH5_CHLRE
Length = 291
Score = 155 bits (393), Expect = 2e-36
Identities = 81/151 (53%), Positives = 109/151 (72%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGT-GISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALE 434
GAILGT G+ REK+GDIL+Q E GAQ+L+ P+LV+ T+L +V V V +IPL L
Sbjct: 141 GAILGTAGVVREKVGDILVQGESGAQILVDPDLVEHFETSLVQVRTVPVETRRIPLSELS 200
Query: 433 YEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGD 254
PPR F +VEAS+R+DA+ASAGF++SR+K+ D+I + DVR+NW VTK VK GD
Sbjct: 201 VRPPRQEEFSSVEASMRLDAIASAGFRMSRTKIGDMIKAGDVRLNWRPVTKPSVEVKEGD 260
Query: 253 VVSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
V+S SGKGR++I TKK K+AV ++RY+
Sbjct: 261 VISCSGKGRVEIKACEMTKKEKYAVTMMRYV 291
[32][TOP]
>UniRef100_Q2JTP6 S4 domain protein n=1 Tax=Synechococcus sp. JA-3-3Ab
RepID=Q2JTP6_SYNJA
Length = 262
Score = 155 bits (392), Expect = 2e-36
Identities = 79/150 (52%), Positives = 110/150 (73%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+L TGI+REK+GDIL+ E GAQ ++VPELVD++ L +V +V V S+IPL L+
Sbjct: 113 GALLATGIAREKVGDILVVGEFGAQAIVVPELVDYLSLNLTQVRSVPVKVSRIPLSQLKV 172
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+PPR S +VEASLR+DAVASAGF +SRSK+V+ I +VRVNW +T+ V D
Sbjct: 173 QPPRVKSITSVEASLRLDAVASAGFGLSRSKMVEEIQRGEVRVNWKPITQASYTVGPQDW 232
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
+++ G+GRL+I E+ ETKKG+F +++ RYL
Sbjct: 233 IAIRGRGRLQIEEVAETKKGRFRIQMKRYL 262
[33][TOP]
>UniRef100_Q2JJI9 S4 domain protein n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13)
RepID=Q2JJI9_SYNJB
Length = 259
Score = 154 bits (389), Expect = 5e-36
Identities = 78/150 (52%), Positives = 107/150 (71%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+LG GI+REK+GDIL+ + GAQ ++VPE+VD++ L +V V V +IPL L
Sbjct: 110 GALLGAGIAREKVGDILLLGDSGAQAIVVPEMVDYLTLNLTQVRTVPVKVGRIPLSQLNI 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+PPR S +VEASLR+DAVASAGF ISRSK+V+ I +VRVNW +T+ V D
Sbjct: 170 QPPRVKSITSVEASLRLDAVASAGFGISRSKMVEEIQRGEVRVNWKPITQASYTVGPQDW 229
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
+++ G+GRL+I E+ ETKKG+F V++ RYL
Sbjct: 230 IAIRGRGRLQIEEVAETKKGRFRVQMRRYL 259
[34][TOP]
>UniRef100_B1XMP5 S4 domain protein n=1 Tax=Synechococcus sp. PCC 7002
RepID=B1XMP5_SYNP2
Length = 253
Score = 154 bits (389), Expect = 5e-36
Identities = 73/150 (48%), Positives = 111/150 (74%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G++LGTG+ R+K+GDIL+ ++GAQ L++PELV F+ T+L +V +V V IPL L+
Sbjct: 104 GSLLGTGLVRDKVGDILVLGDRGAQTLVIPELVSFLETSLVQVRSVPVKTRSIPLEELKV 163
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
PP+ TVEASLR+DA+ SAG +SR+K+ + I+S +VRVNW T+T++ VK GD+
Sbjct: 164 RPPKKKELTTVEASLRLDAIGSAGLGMSRTKMAEAIASGNVRVNWKTITQSSYNVKAGDL 223
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
+S+ GKGR+++GEIN TKK ++ V + R++
Sbjct: 224 ISLRGKGRVEVGEINMTKKERYRVNLTRFV 253
[35][TOP]
>UniRef100_B2IVN0 RNA-binding S4 domain protein n=1 Tax=Nostoc punctiforme PCC 73102
RepID=B2IVN0_NOSP7
Length = 259
Score = 154 bits (388), Expect = 7e-36
Identities = 74/150 (49%), Positives = 108/150 (72%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+LGTGI REK GD+++ E+GAQ ++ PELV+F+ +L +V +V V +I + L
Sbjct: 110 GAMLGTGIVREKTGDVIVLGERGAQAIVAPELVEFLEMSLKQVRSVPVKTQRIEITELRV 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
P+ TVEASLR+DA+ASAGF +SRSK+VD I + DVRVNW VT+ + VK+GD+
Sbjct: 170 REPKKKELTTVEASLRLDAIASAGFGMSRSKMVDFIDAGDVRVNWKEVTQASSQVKSGDL 229
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
+++ KGRL++GEI TKK ++ V++ RY+
Sbjct: 230 IAIRSKGRLEVGEIAVTKKDRYRVQLTRYM 259
[36][TOP]
>UniRef100_P74082 Sll1252 protein n=1 Tax=Synechocystis sp. PCC 6803
RepID=P74082_SYNY3
Length = 259
Score = 153 bits (387), Expect = 9e-36
Identities = 74/150 (49%), Positives = 107/150 (71%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+LGTG+ REK+GDI++ E+GAQ ++VPE+ +F+ L +V V V I L L+
Sbjct: 110 GALLGTGLVREKVGDIILLGERGAQAIVVPEVAEFISLHLTQVRTVPVKAKAIALEELKI 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
PP+T TVEASLR+DA+ASAGF +SRSK+ D ++ +V+VNW VT++ +K GD+
Sbjct: 170 RPPKTKEMTTVEASLRLDAIASAGFGLSRSKMADAVTQGNVQVNWKPVTQSSYALKAGDL 229
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
V+ GKGRL+IGEI TKK ++ +++ RYL
Sbjct: 230 VTYRGKGRLEIGEITVTKKERYRIQLTRYL 259
[37][TOP]
>UniRef100_B5W1F2 Photosystem II S4 domain protein n=1 Tax=Arthrospira maxima CS-328
RepID=B5W1F2_SPIMA
Length = 259
Score = 152 bits (385), Expect = 2e-35
Identities = 74/149 (49%), Positives = 107/149 (71%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G++LGTGI REK GD+++ E+GAQ +++PELV+++ L +V V V I L L+
Sbjct: 110 GSLLGTGIVREKTGDLIVLGERGAQAIVIPELVEYLEMNLTQVRTVPVKVQPIDLSELKV 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
P+ + TVEASLR+DA+ASAGF +SRSK+V+LI DVRVNW V + +KTGD+
Sbjct: 170 REPKKKAMTTVEASLRLDAIASAGFGMSRSKMVNLIDGGDVRVNWKEVKQASIAIKTGDL 229
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRY 164
+++ GKGRL+IGE++ TKK ++ VE+ RY
Sbjct: 230 IAIRGKGRLEIGEVSVTKKQRYRVELTRY 258
[38][TOP]
>UniRef100_B4W101 Photosystem II S4 domain protein n=1 Tax=Microcoleus chthonoplastes
PCC 7420 RepID=B4W101_9CYAN
Length = 259
Score = 152 bits (384), Expect = 2e-35
Identities = 73/150 (48%), Positives = 109/150 (72%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAILGTGI REK+GDI++ E+GAQV+++PE+V F+ T L +V +V V I L L+
Sbjct: 110 GAILGTGIVREKVGDIIVLGERGAQVIVIPEIVPFLETQLTQVRSVPVKTRPIQLSQLKI 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
P+ TVEAS+R+DA+ASAGF SRSK+ DLI + DVRVNW V++ VK GD+
Sbjct: 170 REPKKKEMTTVEASMRLDAIASAGFGTSRSKMADLIGAGDVRVNWKEVSQASYSVKPGDL 229
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
+++ GKGRL++G+++ TKK ++ +++ R++
Sbjct: 230 IAIRGKGRLQVGDVSITKKERYRIQLTRFI 259
[39][TOP]
>UniRef100_A0ZM87 Putative uncharacterized protein n=1 Tax=Nodularia spumigena
CCY9414 RepID=A0ZM87_NODSP
Length = 259
Score = 152 bits (383), Expect = 3e-35
Identities = 75/150 (50%), Positives = 108/150 (72%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+LGTGI REK GDIL+ E+GAQ ++ PEL +F+ +L +V +V V +I + L+
Sbjct: 110 GAMLGTGIVREKTGDILVLGERGAQAIVAPELAEFLEMSLQQVRSVPVKTQRIDINELKV 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
P+ TVEASLR+DA+ASAGF +SRSK+V+ I S DVRVNW VT+ + VK+GD+
Sbjct: 170 REPKKKELTTVEASLRLDAIASAGFGMSRSKMVNYIESGDVRVNWKDVTQASSQVKSGDL 229
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
+++ KGRL++GEI TKK ++ V++ RY+
Sbjct: 230 IAIRSKGRLEVGEIAVTKKERYRVQLTRYM 259
[40][TOP]
>UniRef100_A0YWE2 RNA-binding S4 n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YWE2_9CYAN
Length = 259
Score = 151 bits (381), Expect = 5e-35
Identities = 74/149 (49%), Positives = 107/149 (71%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G++LGTGI REK GDI++ E+GA ++VPELV+F+ L +V +V V +I L L+
Sbjct: 110 GSMLGTGIVREKTGDIIVLGERGAHAVVVPELVEFLEMNLTQVRSVPVKTKRIELSELKI 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
PP+ TVEAS+R+DAVASAGF +SRSK+V LI DVRVNW +++ VK+GD+
Sbjct: 170 RPPKKKEMTTVEASMRLDAVASAGFGMSRSKMVSLIDGGDVRVNWKDISQASYQVKSGDL 229
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRY 164
+++ GKGRL++GE+ TKK ++ V++ RY
Sbjct: 230 IAIRGKGRLEVGEVAVTKKERYRVQLTRY 258
[41][TOP]
>UniRef100_C1FFD4 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FFD4_9CHLO
Length = 311
Score = 151 bits (381), Expect = 5e-35
Identities = 76/150 (50%), Positives = 105/150 (70%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA LG GI R++LGDIL+Q E+GAQ+L + F+ +A+ V V V S PL L
Sbjct: 162 GAALGAGIERDRLGDILVQGERGAQILATRPMAAFLSSAMTSVRKVPVATSIAPLTDLRV 221
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
PPR ++F +VE S+R+DAVASAGF++SRSK+ DLI++ V+VNW K T K+GDV
Sbjct: 222 PPPRVDTFASVEKSMRLDAVASAGFRMSRSKMSDLIAAGAVKVNWREGAKPKTECKSGDV 281
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
+S+ GKGR+++GE+ TKKG F V++ RYL
Sbjct: 282 ISLRGKGRVEVGEVTTTKKGSFNVQLTRYL 311
[42][TOP]
>UniRef100_B0C8C9 Uncharacterized conserved protein, contains S4-like domain n=1
Tax=Acaryochloris marina MBIC11017 RepID=B0C8C9_ACAM1
Length = 259
Score = 148 bits (373), Expect = 4e-34
Identities = 73/149 (48%), Positives = 108/149 (72%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+LGTGI R+++GDIL+ E+GAQ + P+LV F+ T L +V V V IP L+
Sbjct: 110 GALLGTGIVRDQVGDILVLGERGAQAIASPQLVPFLQTHLTQVRTVPVQVEPIPFEQLKV 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
PR TVEAS+R+DAVASAGF +SRSK+V+LI++ DVRVNW ++++ +KTGD+
Sbjct: 170 REPRCKEMTTVEASMRLDAVASAGFGLSRSKMVNLINTGDVRVNWKEISQSSYGLKTGDL 229
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRY 164
V++ GKGRL++GE+ TKK ++ +++ R+
Sbjct: 230 VTIRGKGRLELGEVQITKKERYRIQLKRF 258
[43][TOP]
>UniRef100_Q7NNM0 Gll0391 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NNM0_GLOVI
Length = 262
Score = 147 bits (372), Expect = 5e-34
Identities = 74/149 (49%), Positives = 105/149 (70%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAILGTGI R K+GDIL+ ++GAQ L+ PELV F+ T+L V V V I L
Sbjct: 113 GAILGTGIVRGKVGDILVLGDRGAQTLVAPELVPFLQTSLTSVRTVPVQVVPIGFEELRI 172
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
PP+T +VEASLRIDA+ SAGF +SR+K+V+ I + +V +NW TVT+ V+TGD
Sbjct: 173 RPPQTKEITSVEASLRIDAIGSAGFGLSRNKMVESIEAGEVTLNWKTVTQPSKNVQTGDR 232
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRY 164
+++ G+GRL++G ++ TKKG++ V++IRY
Sbjct: 233 ITLRGRGRLEVGPVDTTKKGRYRVQMIRY 261
[44][TOP]
>UniRef100_Q10X22 RNA-binding S4 n=1 Tax=Trichodesmium erythraeum IMS101
RepID=Q10X22_TRIEI
Length = 259
Score = 147 bits (372), Expect = 5e-34
Identities = 72/150 (48%), Positives = 105/150 (70%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G++LGTGI REK GDI++ E+GAQ ++VP+LV+++ +V +V V I L+
Sbjct: 110 GSMLGTGIEREKTGDIIVLGERGAQAIVVPKLVEYLEMNFQQVRSVPVKIKPIEFSELKI 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
P+ TVEAS+R+DAVASAGF +SRSK+VDLI DVRVNW +++ VKTGD+
Sbjct: 170 RQPKKKELTTVEASMRLDAVASAGFGMSRSKMVDLIDGGDVRVNWKEISQASYTVKTGDL 229
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
+++ GKGRL++G+I TKK ++ V + RY+
Sbjct: 230 IAIRGKGRLEVGDIAITKKERYRVHLTRYV 259
[45][TOP]
>UniRef100_B4WIQ2 Photosystem II S4 domain protein n=1 Tax=Synechococcus sp. PCC 7335
RepID=B4WIQ2_9SYNE
Length = 259
Score = 147 bits (370), Expect = 9e-34
Identities = 71/148 (47%), Positives = 106/148 (71%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G++LGTGI R K+GDI++ E+GAQ ++VPELV+F+ T+L +V +V V I + L
Sbjct: 110 GSLLGTGIVRAKVGDIIVLGERGAQAVVVPELVEFLTTSLTQVRSVSVKTRPIEMSELRV 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
P+ TVEAS+R+DA+ASAGF +SRSK+ D+I+ DVRVNW VT+ ++ GD+
Sbjct: 170 REPKKKEMTTVEASMRLDALASAGFGMSRSKMADMITGGDVRVNWKPVTQASQTLQPGDL 229
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIR 167
V++ GKGRL++GE+ TKK ++ V++ R
Sbjct: 230 VAIRGKGRLEVGEMAVTKKQRYRVQLTR 257
[46][TOP]
>UniRef100_B8HWA0 Photosystem II S4 domain protein n=1 Tax=Cyanothece sp. PCC 7425
RepID=B8HWA0_CYAP4
Length = 259
Score = 145 bits (367), Expect = 2e-33
Identities = 71/150 (47%), Positives = 105/150 (70%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAILGTGI REK+GDI++ E+GAQ + E+ +F+ L +V V V +I L L+
Sbjct: 110 GAILGTGIVREKVGDIIVLGERGAQAIATTEMAEFLELHLTQVRTVPVQTRRIELSELKI 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
PP+ TVEASLR+DA+ASAGF +SRSK+ DLI++ DVRVNW +++ +K GD+
Sbjct: 170 RPPQKKELTTVEASLRLDAIASAGFGMSRSKMADLIAAGDVRVNWKDISQPSFTLKAGDL 229
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL 161
V++ GKGRL++G++ TKK ++ V++ R +
Sbjct: 230 VAIRGKGRLEVGDVQVTKKERYRVQLTRLI 259
[47][TOP]
>UniRef100_Q017D1 [S] KOG4837 Uncharacterized conserved protein n=1 Tax=Ostreococcus
tauri RepID=Q017D1_OSTTA
Length = 306
Score = 135 bits (340), Expect = 3e-30
Identities = 67/151 (44%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAILGTGI RE++GDI++ E+GA V++ PE+ +F+ TAL V V V ++ L+
Sbjct: 156 GAILGTGIKRERVGDIVVTGERGADVMVTPEMCEFLSTALTSVRTVKVEAREVDASELKV 215
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
P+T +T E+S R+DA+ SAGF++SRSK + + S DV+VNW V+K + GDV
Sbjct: 216 PEPKTEEMQTSESSTRLDAIGSAGFRMSRSKFMAHVDSGDVKVNWKEVSKGRHDLNAGDV 275
Query: 250 VSVSGKGRLKIGEINETKK-GKFAVEIIRYL 161
+S GKGR+++ EIN +K G+F V ++R++
Sbjct: 276 ISCRGKGRVEVLEINPARKEGRFFVRLLRFV 306
[48][TOP]
>UniRef100_A4RYT0 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4RYT0_OSTLU
Length = 303
Score = 129 bits (324), Expect = 2e-28
Identities = 68/151 (45%), Positives = 97/151 (64%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAILGTGI REK+GDI++ E+GA V++ PE+ +F+ TAL V V V ++ L+
Sbjct: 153 GAILGTGIKREKVGDIVVTGERGADVMVSPEMAEFLSTALTSVRTVKVEAREVDASELKV 212
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
P+ + E+S R+DA+ SAGF++SRSK V + S DV+VNW V K + GDV
Sbjct: 213 PEPKVEDIFSSESSTRLDALGSAGFRMSRSKFVAHVESGDVKVNWKEVKKGRYDLSAGDV 272
Query: 250 VSVSGKGRLKIGEINETKK-GKFAVEIIRYL 161
VS GKGRL++ +I +K G+FA + RY+
Sbjct: 273 VSCRGKGRLEVVDIQPARKEGRFACNLRRYV 303
[49][TOP]
>UniRef100_C0GJQ8 RNA-binding S4 domain protein n=1 Tax=Dethiobacter alkaliphilus AHT
1 RepID=C0GJQ8_9FIRM
Length = 261
Score = 127 bits (318), Expect = 9e-28
Identities = 63/142 (44%), Positives = 96/142 (67%), Gaps = 1/142 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+LG G+ REKLGDIL+ E AQ+++ PE++ F++T +VG V+ +I L
Sbjct: 111 GAVLGLGLRREKLGDILLIGESKAQLVVHPEILSFLLTNWGEVGKYSVSVKEITADELAP 170
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
PPR KT ASLR+D+VASAGF +SRSKL + S +++NW +VT VK GD+
Sbjct: 171 TPPRVREIKTTVASLRLDSVASAGFGMSRSKLSPAVKSGQIKLNWQSVTSASATVKEGDI 230
Query: 250 VSVSGKGRLKIGEI-NETKKGK 188
+S++G+GR+++ E+ ++KKG+
Sbjct: 231 ISLAGRGRVEVAEVRGQSKKGR 252
[50][TOP]
>UniRef100_Q8DGZ9 Tlr2161 protein n=1 Tax=Thermosynechococcus elongatus BP-1
RepID=Q8DGZ9_THEEB
Length = 243
Score = 119 bits (297), Expect = 3e-25
Identities = 63/148 (42%), Positives = 92/148 (62%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAI G+ GD+++ E+GAQV+++PE V + L +V V VT L
Sbjct: 94 GAIASVGLDEGDYGDVILLGERGAQVILIPEKVSTLQKELKQVRTVPVTVDLCDWSELAV 153
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
PP+ S TVEASLR+DAVASAGF +SRSK+ + IS VRVNW V + ++K D+
Sbjct: 154 APPQRKSLSTVEASLRLDAVASAGFGVSRSKMSEWISQGLVRVNWQVVQQPRYLLKVNDL 213
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIR 167
+++ GKG+L+I EI TKK ++ +++ R
Sbjct: 214 IAIRGKGQLRIQEIQLTKKERYRIQMER 241
[51][TOP]
>UniRef100_A3DDJ5 RNA-binding S4 n=3 Tax=Clostridium thermocellum RepID=A3DDJ5_CLOTH
Length = 263
Score = 115 bits (287), Expect = 4e-24
Identities = 61/151 (40%), Positives = 95/151 (62%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+++G GI REK+GDIL++E+ A V+++ ++ D++ L KVGN V + L+
Sbjct: 114 GSLMGLGIKREKIGDILVREDF-AFVVVLKDIADYIRINLTKVGNARVEIDIVNPDELDI 172
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
P+ + ASLR+D+VASAGF ISRSK DLI + V VNW T T +VK GD
Sbjct: 173 LEPKVKEISSTVASLRLDSVASAGFGISRSKTADLIRGEKVAVNWETATNPARLVKEGDT 232
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEIIRYL 161
+S+ GKGR+ + ++ N TKK + + + +++
Sbjct: 233 ISIRGKGRVVVEKVGNTTKKDRIHILLKKFI 263
[52][TOP]
>UniRef100_B9MRZ3 RNA-binding S4 domain protein n=1 Tax=Anaerocellum thermophilum DSM
6725 RepID=B9MRZ3_ANATD
Length = 260
Score = 113 bits (282), Expect = 1e-23
Identities = 65/153 (42%), Positives = 96/153 (62%), Gaps = 4/153 (2%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+ +G G+ R+K+GDIL++E GA V + E+ +VVT +DK+GN V CS + ++
Sbjct: 108 GSFIGNGLKRDKIGDILVKEN-GALVFVKDEIATYVVTNIDKMGNEKVKCSIVGNGQIDI 166
Query: 430 EPPRTNSFKTVE---ASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKT 260
+ N+ K V ASLR+D+V S GF ISR + DLI V VNW + K VK
Sbjct: 167 KWFINNNSKRVVYTVASLRVDSVISHGFGISREEAADLIRQMKVAVNWVYIDKPSYAVKE 226
Query: 259 GDVVSVSGKGRLKIGEI-NETKKGKFAVEIIRY 164
GD+VSV GRLKI ++ + TKKG+ ++E++R+
Sbjct: 227 GDLVSVRHHGRLKIEKVLSTTKKGRISIEVLRF 259
[53][TOP]
>UniRef100_Q8R9L0 Putative uncharacterized protein n=1 Tax=Thermoanaerobacter
tengcongensis RepID=Q8R9L0_THETN
Length = 248
Score = 112 bits (279), Expect = 3e-23
Identities = 68/152 (44%), Positives = 98/152 (64%), Gaps = 2/152 (1%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLL-ALE 434
G+ILG GI REK+GDI+++E K V++ E+ DF++ L K+G V +I L ++
Sbjct: 99 GSILGLGIKREKVGDIIVKESK-CDVILKEEMRDFLLFNLTKIGRESVEVHEIELSDVMQ 157
Query: 433 YEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGD 254
E + F TV ASLR+D+VA++GF ISR+K +LI S +RVNW V V GD
Sbjct: 158 PEIKYKDIFSTV-ASLRVDSVAASGFGISRTKASELIKSGLLRVNWEAVEDPSFHVGEGD 216
Query: 253 VVSVSGKGRLKIGEI-NETKKGKFAVEIIRYL 161
V+S+ G GR+K+ EI TKKG+ ++ I+RYL
Sbjct: 217 VISLRGFGRIKLQEIKGNTKKGRISIHILRYL 248
[54][TOP]
>UniRef100_C0WA16 S4 RNA-binding protein n=1 Tax=Acidaminococcus sp. D21
RepID=C0WA16_9FIRM
Length = 261
Score = 111 bits (278), Expect = 4e-23
Identities = 59/151 (39%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA G G SR+ LGDI+ +E GAQ+++ +V F+++ L ++G V +IPL L+
Sbjct: 112 GAFTGMGCSRDILGDIVFTDE-GAQMVVDKTMVPFILSNLTQIGAATVEVKEIPLTELKE 170
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ R ++LR+DAVA+AGF +SRS++ + I ++VRVNW +VK GDV
Sbjct: 171 KEQRVKVISATVSALRLDAVAAAGFGVSRSRMAEEIKGQNVRVNWQDAKNPSQLVKEGDV 230
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEIIRYL 161
+S +GR ++ E+ TKKG+ A+ + RYL
Sbjct: 231 ISFRSRGRAELAEVRGTTKKGRMAITMKRYL 261
[55][TOP]
>UniRef100_C4FNJ4 Putative uncharacterized protein n=1 Tax=Veillonella dispar ATCC
17748 RepID=C4FNJ4_9FIRM
Length = 261
Score = 109 bits (273), Expect = 2e-22
Identities = 58/151 (38%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+++G GI R K GD+++Q+ GAQ+L+ + DFV+ K+ V V+ I L +
Sbjct: 112 GSLMGLGIDRSKFGDVIVQQG-GAQILVDESVADFVIQNFTKIAMVSVSVEAIDLSDIAP 170
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ + +T ASLR+DAVAS+GF +SR+KLV I++ ++VNW VK GDV
Sbjct: 171 KEEKIKEVRTTVASLRLDAVASSGFSVSRTKLVSAINAGLLQVNWQPAKGASQEVKEGDV 230
Query: 250 VSVSGKGRLKIGEINET-KKGKFAVEIIRYL 161
+S+ G+GR+K+ I T +KG+ V + R++
Sbjct: 231 ISMRGRGRMKVEAITGTSRKGRIGVYLKRFM 261
[56][TOP]
>UniRef100_C9LW05 S4 domain protein n=1 Tax=Selenomonas sputigena ATCC 35185
RepID=C9LW05_9FIRM
Length = 261
Score = 109 bits (272), Expect = 2e-22
Identities = 62/151 (41%), Positives = 95/151 (62%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAI+G G+ RE +GDI IQ+ A+++ V + DF++T + G VTCS L AL
Sbjct: 112 GAIMGLGVEREIIGDIQIQQG-AARIVTVENMADFLLTNCVQFGAAHVTCSLGELSALLP 170
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
R + ASLR D++A+AGF +SRS+ I+++ +++NW +V VK GDV
Sbjct: 171 REERCKEIRATVASLRADSIAAAGFGMSRSRAAADIAAEKLKLNWQSVKSASQAVKEGDV 230
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEIIRYL 161
+S+ G+GRL++ EI +TKKG+ +V + RYL
Sbjct: 231 LSMRGRGRLEVKEIRGQTKKGRISVLLHRYL 261
[57][TOP]
>UniRef100_C0V3A6 Uncharacterized conserved protein, contains S4-like domain n=1
Tax=Veillonella parvula DSM 2008 RepID=C0V3A6_9FIRM
Length = 261
Score = 108 bits (271), Expect = 3e-22
Identities = 57/151 (37%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+++G GI R K GD+++Q+ GAQ+++ + DFV+ K+ V V+ I L +
Sbjct: 112 GSLMGLGIDRSKFGDVIVQQG-GAQIMVDESVADFVIQNFTKIAMVSVSVEAIELSDIAP 170
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ + +T ASLR+DAVAS+GF +SR+KLV I++ ++VNW VK GDV
Sbjct: 171 KEEKIKEVRTTVASLRLDAVASSGFSVSRTKLVSAINAGLLQVNWQPAKGASQEVKEGDV 230
Query: 250 VSVSGKGRLKIGEINET-KKGKFAVEIIRYL 161
+S+ G+GR+K+ I T +KG+ V + R++
Sbjct: 231 ISMRGRGRMKVEAITGTSRKGRIGVYLKRFM 261
[58][TOP]
>UniRef100_Q3AAH6 S4 domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901
RepID=Q3AAH6_CARHZ
Length = 246
Score = 107 bits (266), Expect = 1e-21
Identities = 64/151 (42%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAILGTGI REK+GD+++ G QV++ +LV +++ LDKV VGVT +I L
Sbjct: 97 GAILGTGIKREKVGDLILIPN-GCQVVVDRDLVPYLIQQLDKVHRVGVTVKEIVREELLL 155
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+T SLR+D+V ++GF ISRS++V I + VRVNW K V GDV
Sbjct: 156 PEAKTREVVAFVKSLRLDSVGASGFGISRSQMVKEIEGQKVRVNWKLQVKPSYEVAPGDV 215
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEIIRYL 161
+S+ G+GR+++ EI +K G+ V + RYL
Sbjct: 216 ISLRGRGRVEVLEIAGVSKSGRNKVILRRYL 246
[59][TOP]
>UniRef100_C9KPZ5 S4 domain protein n=1 Tax=Mitsuokella multacida DSM 20544
RepID=C9KPZ5_9FIRM
Length = 264
Score = 107 bits (266), Expect = 1e-21
Identities = 53/151 (35%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA++G GI R++LGD+L+ + ++L ++ ++++ L K+G VGV+C L +
Sbjct: 115 GALMGLGIERDRLGDLLVTADS-VRILCDSKMAEYLLQNLTKIGAVGVSCEMADLAGIAP 173
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
R + ASLRID++A++GF SRS+ I++ +++NW V VK GD+
Sbjct: 174 REERCKEIRATVASLRIDSIAASGFGSSRSRAAADIAADKMKLNWQPVKSASQTVKEGDI 233
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEIIRYL 161
+S+ G+GRL++ E+ +TKKG+ V + RY+
Sbjct: 234 ISMRGRGRLEVAEVRGQTKKGRTVVVLKRYI 264
[60][TOP]
>UniRef100_B8I756 RNA-binding S4 domain protein n=1 Tax=Clostridium cellulolyticum
H10 RepID=B8I756_CLOCE
Length = 260
Score = 106 bits (264), Expect = 2e-21
Identities = 54/150 (36%), Positives = 89/150 (59%), Gaps = 1/150 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G++LG GI REK+GDIL+ E K V ++ ++ +++ LDK+GN V C +
Sbjct: 111 GSLLGLGIKREKIGDILVSE-KCTDVFVIDKIAEYISYNLDKIGNTKVHCELCDIYQFTP 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ S T ASLR D+VAS+GF +SR+K++D ++ V VNW V ++ GDV
Sbjct: 170 PQKKVRSINTTVASLRADSVASSGFGLSRTKVMDYFKAQKVNVNWELVQSPSKMLTEGDV 229
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEIIRY 164
+S+ G GR+ + ++ T+K + ++ I R+
Sbjct: 230 ISIRGMGRIVLEKVLGNTRKDRISIIIKRF 259
[61][TOP]
>UniRef100_A6TRY3 RNA-binding S4 domain protein n=1 Tax=Alkaliphilus metalliredigens
QYMF RepID=A6TRY3_ALKMQ
Length = 262
Score = 106 bits (264), Expect = 2e-21
Identities = 61/147 (41%), Positives = 90/147 (61%), Gaps = 1/147 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAILG GI REK+GDIL+Q++ QV+I EL D+V+ L KVGN+ V +I L ++
Sbjct: 113 GAILGLGIKREKIGDILLQDDI-CQVVITTELRDYVLLNLVKVGNMSVKVREIELEEIKA 171
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ ASLR+DA+ SAGFK+SRS+ LI + VNW + K V GD+
Sbjct: 172 PDKVYKEIRLNVASLRLDAIVSAGFKLSRSEAHVLIQKQRCSVNWEVIDKPSNEVSCGDL 231
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEI 173
+S+ GKGR+ + I T+ G+ ++++
Sbjct: 232 ISIRGKGRMIVENIEGTTRSGRTSIKL 258
[62][TOP]
>UniRef100_C7IDL5 RNA-binding S4 domain protein n=1 Tax=Clostridium papyrosolvens DSM
2782 RepID=C7IDL5_9CLOT
Length = 260
Score = 106 bits (264), Expect = 2e-21
Identities = 53/150 (35%), Positives = 91/150 (60%), Gaps = 1/150 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+++G GI REK+GDIL+ E A V ++ ++ ++++ LDK+GNV V C +
Sbjct: 111 GSLIGLGIKREKIGDILVNETF-ADVFVIDKIAEYILYNLDKIGNVKVQCELCDIYQFTP 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ S T ASLR D+VAS+GF +SR+K+++ ++ V VNW V ++ GDV
Sbjct: 170 PQKKERSINTTVASLRADSVASSGFGLSRTKVMEYFKAQRVNVNWEVVQSPSKMLDEGDV 229
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEIIRY 164
+S+ G GR+ + ++ T+K + ++ I R+
Sbjct: 230 ISIRGMGRIVLEKVLGNTRKDRISIVIKRF 259
[63][TOP]
>UniRef100_A8MH67 RNA-binding S4 domain protein n=1 Tax=Alkaliphilus oremlandii
OhILAs RepID=A8MH67_ALKOO
Length = 262
Score = 105 bits (263), Expect = 2e-21
Identities = 62/156 (39%), Positives = 95/156 (60%), Gaps = 6/156 (3%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLL---- 443
GAILG G+ REK+GDI++ E +QV++ L D++ L+KVGNV V ++ +
Sbjct: 113 GAILGLGLKREKIGDIIVHNEI-SQVIVHESLKDYIFYNLNKVGNVSVKIKELEISDIIP 171
Query: 442 -ALEYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIV 266
+EY+ R N +SLR+DA+ S +KISRS+ +LIS + V VNW TK+ V
Sbjct: 172 PKIEYKEIRGNV-----SSLRLDAILSLAYKISRSEAQELISKERVSVNWKNTTKSAQDV 226
Query: 265 KTGDVVSVSGKGRLKIGEI-NETKKGKFAVEIIRYL 161
G+++SV GKGR+KI I +TK + V + +++
Sbjct: 227 TEGNIISVKGKGRVKIAAIEGKTKSDRIVVSVHKFV 262
[64][TOP]
>UniRef100_B0K2W4 RNA-binding S4 domain protein n=5 Tax=Thermoanaerobacter
RepID=B0K2W4_THEPX
Length = 248
Score = 105 bits (262), Expect = 3e-21
Identities = 62/152 (40%), Positives = 99/152 (65%), Gaps = 2/152 (1%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLL-ALE 434
G++LG GI R+K+GDI+++E+K +L+ ++ +V+ L KVG V + I L +E
Sbjct: 99 GSLLGLGIKRQKIGDIIVKEDK-CDILLHKDVESYVLMNLFKVGKEKVRVNSIDLKDVIE 157
Query: 433 YEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGD 254
E + F TV ASLR+D+VA+AGF ISR+K +LI S +++NW + VK GD
Sbjct: 158 PEIKYKDIFSTV-ASLRVDSVAAAGFGISRTKASELIKSGLLQINWEYTEDPSSEVKEGD 216
Query: 253 VVSVSGKGRLKIGEI-NETKKGKFAVEIIRYL 161
V+S+ G GR+++ E+ TKKG+ +V I+R++
Sbjct: 217 VISLRGFGRIRLEEVRGNTKKGRVSVHILRFI 248
[65][TOP]
>UniRef100_C8W4A4 RNA-binding S4 domain protein n=1 Tax=Desulfotomaculum acetoxidans
DSM 771 RepID=C8W4A4_9FIRM
Length = 267
Score = 103 bits (258), Expect = 8e-21
Identities = 57/151 (37%), Positives = 88/151 (58%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+LG GI REKLGDI++ E AQ+++ E+ DF+ L K+G V V+ +I L
Sbjct: 118 GALLGLGIKREKLGDIIVLEN-AAQLIVAEEISDFIAANLVKIGRVRVSVKRIKEQDLIL 176
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ +T SLR D + GF SRSK+ I+++ + +NW + + VK D+
Sbjct: 177 PEKKFKEIRTTVPSLRFDVICGEGFGTSRSKIAREITAEKINLNWQSCSDLSRPVKEKDI 236
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEIIRYL 161
+S G+GRL+I E+ +TKKG+ V + +YL
Sbjct: 237 ISARGRGRLEIYEVGGKTKKGRLVVVLRKYL 267
[66][TOP]
>UniRef100_A4J2F1 RNA-binding S4 domain protein n=1 Tax=Desulfotomaculum reducens
MI-1 RepID=A4J2F1_DESRM
Length = 255
Score = 103 bits (257), Expect = 1e-20
Identities = 55/151 (36%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G++LG GI RE +GD+++ + KG QV++ E+ +++ L KV V V +I L+
Sbjct: 106 GSLLGLGIKREMVGDLIVSD-KGCQVMVAREIAPYLMANLTKVHKVRVEVREICPEELKL 164
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ KT ASLR+D VA+AGF SRS++ I ++ + +NW + + VK+GD+
Sbjct: 165 PELKVKEIKTTVASLRLDTVAAAGFGTSRSRIAREIQAERLNLNWHSCSDVAASVKSGDM 224
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEIIRYL 161
+S+ G+GR++I E+ TK G+ ++ + RYL
Sbjct: 225 LSIRGRGRVEIAEVKGNTKSGRISIVLKRYL 255
[67][TOP]
>UniRef100_C6Q3J5 RNA-binding S4 domain protein n=1 Tax=Thermoanaerobacter mathranii
subsp. mathranii str. A3 RepID=C6Q3J5_9THEO
Length = 248
Score = 103 bits (257), Expect = 1e-20
Identities = 62/152 (40%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLL-ALE 434
G++LG GI R+K+GDI+++E+K +L+ ++ +V+ KVG V S I L +E
Sbjct: 99 GSLLGLGIRRQKIGDIIVKEDK-CDILLHKDVESYVLMNFFKVGKEKVRVSSIDLKDVME 157
Query: 433 YEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGD 254
E + F TV ASLR+D+VA+AGF ISR+K LI S +++NW + VK GD
Sbjct: 158 PEIRYKDIFSTV-ASLRVDSVAAAGFGISRTKASQLIKSGLLQINWEYTDDPSSEVKEGD 216
Query: 253 VVSVSGKGRLKIGEI-NETKKGKFAVEIIRYL 161
V+S+ G GR+++ E+ TKKG+ +V I+R++
Sbjct: 217 VISLRGFGRIRLEEVRGNTKKGRVSVHILRFI 248
[68][TOP]
>UniRef100_A1HSA2 RNA-binding S4 domain protein n=1 Tax=Thermosinus carboxydivorans
Nor1 RepID=A1HSA2_9FIRM
Length = 262
Score = 103 bits (257), Expect = 1e-20
Identities = 58/151 (38%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA++G GI R+ +GDI I GAQV++ + F+ T L KVG V IPL +
Sbjct: 113 GALMGLGIDRDVVGDI-IMTGSGAQVVVDTAMAGFIETNLTKVGAAPVAVKIIPLSDIAP 171
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ + SLR+D VA+AGF +SR+K+ I++ V+VNW VK GD+
Sbjct: 172 RIEKVKEIRATVPSLRLDVVAAAGFGLSRTKMAAEIAADKVKVNWQEAKNAAQAVKPGDI 231
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEIIRYL 161
+S+ G+GR++I EI +TKKG+ ++ + R+L
Sbjct: 232 ISMRGRGRVEICEILGQTKKGRISIFLKRFL 262
[69][TOP]
>UniRef100_C6PG68 RNA-binding S4 domain protein n=1 Tax=Thermoanaerobacter italicus
Ab9 RepID=C6PG68_9THEO
Length = 248
Score = 102 bits (254), Expect = 2e-20
Identities = 61/152 (40%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLL-ALE 434
G++LG GI R+K+GDI+++E+K +L+ ++ +V+ KVG V + I L +E
Sbjct: 99 GSLLGLGIRRQKIGDIIVKEDK-CDILLHKDVESYVLMNFFKVGKEKVRINSIDLKDVME 157
Query: 433 YEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGD 254
E + F TV ASLR+D++A+AGF ISR+K LI S ++VNW + VK GD
Sbjct: 158 PEIKYKDIFSTV-ASLRVDSIAAAGFGISRTKASQLIKSGLLQVNWEYTGDPSSEVKEGD 216
Query: 253 VVSVSGKGRLKIGEI-NETKKGKFAVEIIRYL 161
V+S+ G GR+++ E+ TKKG+ +V I+R++
Sbjct: 217 VISLRGFGRIRLEEVRGNTKKGRVSVHILRFI 248
[70][TOP]
>UniRef100_C6D540 RNA-binding S4 domain protein n=1 Tax=Paenibacillus sp. JDR-2
RepID=C6D540_PAESJ
Length = 257
Score = 100 bits (248), Expect = 1e-19
Identities = 55/151 (36%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+LG G+ R+++GDI + E+ + ++++ E+ D++ L +V V IP L L+
Sbjct: 108 GALLGLGVKRDRIGDIHVHEDY-SHIIVLDEIADYLNVHLRQVHRASVLTEIIPTLKLKP 166
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
P AS+R+D +AS ++ISR+K+VD I + RVNW T +K GDV
Sbjct: 167 VVPALQEMSFTVASMRLDGIASDVYRISRTKIVDPIRAGRCRVNWKTAENPSEQLKLGDV 226
Query: 250 VSVSGKGRLKIGEIN-ETKKGKFAVEIIRYL 161
VS G GR K+ EI+ TKKG+ V++ +++
Sbjct: 227 VSFKGLGRFKVMEIDGMTKKGRIRVKVGKFI 257
[71][TOP]
>UniRef100_C9LQI9 S4 domain protein n=1 Tax=Dialister invisus DSM 15470
RepID=C9LQI9_9FIRM
Length = 263
Score = 99.8 bits (247), Expect = 2e-19
Identities = 58/150 (38%), Positives = 84/150 (56%), Gaps = 1/150 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA++G GI R LGDIL+Q G Q++ + +++ KV V V +I L LE
Sbjct: 114 GALMGLGIDRAVLGDILMQGA-GCQIVADSSMAEWIKRNFLKVAMVSVQIKEISLEELEP 172
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ ASLR+DAV +AGF ISRSK+V + S +NW V +K GDV
Sbjct: 173 PKKTAREVRATVASLRLDAVGAAGFGISRSKMVQCVESGRTEINWQPVKSASQTIKAGDV 232
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEIIRY 164
+S+ GKGR++I E+ ++KG+ + I RY
Sbjct: 233 ISIRGKGRIEIREVTGMSRKGRTGLLIDRY 262
[72][TOP]
>UniRef100_C6PEB2 RNA-binding S4 domain protein n=1 Tax=Thermoanaerobacterium
thermosaccharolyticum DSM 571 RepID=C6PEB2_CLOTS
Length = 246
Score = 99.8 bits (247), Expect = 2e-19
Identities = 52/150 (34%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+ILG GI R+K+GDI I+ ++ +++ ++ +++ L K+G V I L +
Sbjct: 97 GSILGLGIKRDKVGDI-IKRQESCDIVVHNDIASYILINLHKIGKERVNVYSINLDEIME 155
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ + T AS+R+D++ ++GFK+SR+K +LI + VNW T + +K GD+
Sbjct: 156 PEVKYDDINTTVASIRLDSIIASGFKLSRTKASELIKAGLAEVNWETKLEPSFEIKEGDI 215
Query: 250 VSVSGKGRLKIGE-INETKKGKFAVEIIRY 164
VS+ G+GR+K E I TKKG+ + I++Y
Sbjct: 216 VSLRGRGRIKFEEIIGTTKKGRIYIHILKY 245
[73][TOP]
>UniRef100_B2A2I6 RNA-binding S4 domain protein n=1 Tax=Natranaerobius thermophilus
JW/NM-WN-LF RepID=B2A2I6_NATTJ
Length = 265
Score = 99.0 bits (245), Expect = 3e-19
Identities = 55/151 (36%), Positives = 88/151 (58%), Gaps = 2/151 (1%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVD-FVVTALDKVGNVGVTCSKIPLLALE 434
GA++G G+ R+K+GDI + EE+ ++ V E + F+ L +V NV V+ + +
Sbjct: 114 GAVMGLGLKRDKIGDIHVMEEEHRLIIAVDESISQFITQNLTQVKNVSVSAEAMDQEEIP 173
Query: 433 YEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGD 254
+ T K +SLR+DAVAS GF SRSK+ LI ++ +++NW V GD
Sbjct: 174 RQQEYTREIKGTVSSLRLDAVASIGFGASRSKMSQLIKAERIKLNWQPTKDPKATVSEGD 233
Query: 253 VVSVSGKGRLKIGEI-NETKKGKFAVEIIRY 164
V+S+ GKGR++I I +++KG+ V + RY
Sbjct: 234 VISLRGKGRVEISAIGGKSRKGRRHVTLKRY 264
[74][TOP]
>UniRef100_C4V5I6 Ribosomal protein S4e n=1 Tax=Selenomonas flueggei ATCC 43531
RepID=C4V5I6_9FIRM
Length = 264
Score = 98.6 bits (244), Expect = 4e-19
Identities = 54/150 (36%), Positives = 88/150 (58%), Gaps = 1/150 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA++G GI RE +GDIL + A++L ++ F++ L +G V V + L +
Sbjct: 115 GAVMGLGIEREMIGDILPAPDT-AKILCDAKIAPFLIENLTMIGAVSVKTAPSDLAEIAP 173
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
RT + ASLR+D++ +AGF ISRS+ D I++ V+ NW + VK GDV
Sbjct: 174 REERTKEIRATVASLRLDSIVAAGFGISRSRAADDIAADKVKHNWQSTASASKTVKEGDV 233
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEIIRY 164
+S+ G+GR+++ E+ +TKKG+ V + R+
Sbjct: 234 LSMRGRGRVEVTEVRGQTKKGRTVVVLHRF 263
[75][TOP]
>UniRef100_B0G5L0 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC
27755 RepID=B0G5L0_9FIRM
Length = 251
Score = 97.1 bits (240), Expect = 1e-18
Identities = 55/151 (36%), Positives = 87/151 (57%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAI+ G SR K+GDI IQ + GA V + E+ D+++ L ++ + +T + L + Y
Sbjct: 103 GAIMNLGTSRTKIGDI-IQADDGAIVFVKEEISDYIMKNLTRIRHTTITVERRELSDISY 161
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
EP K S+R+D V S + +SRSKL I + V VN +T NG + GD+
Sbjct: 162 EP-HFEELKGTVPSVRLDTVLSVAYPLSRSKLTTYIEAAKVFVNGKLITNNGYHLNEGDL 220
Query: 250 VSVSGKGRLK-IGEINETKKGKFAVEIIRYL 161
+SV G GR+ G ++ETKKG++ + + +Y+
Sbjct: 221 ISVRGLGRIAYAGILSETKKGRYMISLRKYI 251
[76][TOP]
>UniRef100_A2C714 Uncharacterized conserved protein, contains S4-like domain n=1
Tax=Prochlorococcus marinus str. MIT 9303
RepID=A2C714_PROM3
Length = 295
Score = 96.3 bits (238), Expect = 2e-18
Identities = 53/140 (37%), Positives = 84/140 (60%), Gaps = 1/140 (0%)
Frame = -2
Query: 580 EKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYEPPR-TNSFK 404
E+LGD+ I+ ++GAQ L PEL + KV V +TC + + L+ R T
Sbjct: 156 EQLGDLWIRGDRGAQALCTPELAVNLDGRSSKVREVEITCEAVAVTQLQPPAHRLTRRLN 215
Query: 403 TVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDVVSVSGKGRL 224
+VEAS RIDA+ASAGF +SR+K+V+ I +R+NW V + + GD + + G+G L
Sbjct: 216 SVEASCRIDAIASAGFGLSRAKVVNQIKQGHLRLNWEPVRQTSRELVVGDRLQLQGRGTL 275
Query: 223 KIGEINETKKGKFAVEIIRY 164
K+ + TK+ ++ VE++R+
Sbjct: 276 KVLALEMTKRQRWRVEMLRH 295
[77][TOP]
>UniRef100_C0BC67 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC
27758 RepID=C0BC67_9FIRM
Length = 258
Score = 95.9 bits (237), Expect = 2e-18
Identities = 60/151 (39%), Positives = 88/151 (58%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+L GI+R K GDILI + K A V + EL +F+V L +V + V ++ ++
Sbjct: 110 GALLNLGITRAKTGDILIHD-KEAYVFVHQELTEFLVKELTRVRHTTVRAVEVENADFKW 168
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
EP + K AS+R+D++ S F SRSKL LI + V VN +T NG VK D+
Sbjct: 169 EP-KYEEIKGTVASVRLDSLLSLAFSSSRSKLTALIEAGRVYVNGKLITSNGYHVKDNDI 227
Query: 250 VSVSGKGRLKI-GEINETKKGKFAVEIIRYL 161
+SV GR + G ++ETKKG++ V I +Y+
Sbjct: 228 ISVRQMGRFQYEGVLSETKKGRYYVTIRKYI 258
[78][TOP]
>UniRef100_C5RW19 RNA-binding S4 domain protein n=1 Tax=Thermoanaerobacter sp. X513
RepID=C5RW19_9THEO
Length = 244
Score = 95.5 bits (236), Expect = 3e-18
Identities = 59/144 (40%), Positives = 91/144 (63%), Gaps = 2/144 (1%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLL-ALE 434
G++LG GI R+K+GDI+++E+K +L+ ++ +V+ L KVG V + I L +E
Sbjct: 99 GSLLGLGIKRQKIGDIIVKEDK-CDILLHKDVESYVLMNLFKVGKEKVRVNSIDLKDVIE 157
Query: 433 YEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGD 254
E + F TV ASLR+D+VA+AGF ISR+K +LI S +++NW + VK GD
Sbjct: 158 PEIKYKDIFSTV-ASLRVDSVAAAGFGISRTKASELIKSGLLQINWEYTEDPSSEVKEGD 216
Query: 253 VVSVSGKGRLKIGEI-NETKKGKF 185
V+S+ G GR+++ E+ TKK F
Sbjct: 217 VISLRGFGRIRLEEVRGNTKKVAF 240
[79][TOP]
>UniRef100_B5IMK1 Photosystem II S4 domain protein n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5IMK1_9CHRO
Length = 261
Score = 95.5 bits (236), Expect = 3e-18
Identities = 54/150 (36%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Frame = -2
Query: 607 AILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYE 428
A++ G + +GD+ ++ ++GAQ ++V + + V +V VT +PL L+
Sbjct: 113 ALIQQGWADGAIGDVWLRGDRGAQAIVVAKAAEPTAALTLTVRSVPVTGELVPLALLQ-- 170
Query: 427 PP---RTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTG 257
PP + TVEAS R+DAVASAGF ISR+++V LI VR+NW ++ G ++ G
Sbjct: 171 PPARRQPRQLHTVEASTRLDAVASAGFGISRNRMVTLIRDGAVRLNWVVASRPGQELQAG 230
Query: 256 DVVSVSGKGRLKIGEINETKKGKFAVEIIR 167
D V +SG+G L++ I TK+ ++ +E+ R
Sbjct: 231 DRVQLSGRGELEVRAITATKRERWRIELSR 260
[80][TOP]
>UniRef100_Q7V5V6 Putative uncharacterized protein n=1 Tax=Prochlorococcus marinus
str. MIT 9313 RepID=Q7V5V6_PROMM
Length = 263
Score = 95.1 bits (235), Expect = 4e-18
Identities = 52/140 (37%), Positives = 84/140 (60%), Gaps = 1/140 (0%)
Frame = -2
Query: 580 EKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYEPPR-TNSFK 404
E+LGD+ I+ ++GAQ L PEL + +V V +TC + + L+ R T
Sbjct: 124 EQLGDLWIRGDRGAQALCTPELAVNLDGRSSRVREVEITCEAVAVAQLQPPAHRLTRRLN 183
Query: 403 TVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDVVSVSGKGRL 224
+VEAS RIDA+ASAGF +SR+K+V+ I +R+NW V + + GD + + G+G L
Sbjct: 184 SVEASCRIDAIASAGFGLSRAKVVNQIKQGHLRLNWEPVRQTSRELVVGDRLQLQGRGTL 243
Query: 223 KIGEINETKKGKFAVEIIRY 164
K+ + TK+ ++ VE++R+
Sbjct: 244 KVLALEMTKRQRWRVEMLRH 263
[81][TOP]
>UniRef100_B8CWL2 RNA-binding S4 domain protein n=1 Tax=Halothermothrix orenii H 168
RepID=B8CWL2_HALOH
Length = 262
Score = 95.1 bits (235), Expect = 4e-18
Identities = 56/152 (36%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAILG GI RE +GDILI ++ A+V++ E+ +++ L KV V V ++ +
Sbjct: 113 GAILGLGIKREMIGDILILKDF-AEVVVAEEIKEYICLRLKKVHQVPVNVEELDRENVVI 171
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
T F T S+R+DAV+SAGF SR+K+ +I S+ V+VNW V+ GD+
Sbjct: 172 PAENTREFTTTVPSMRLDAVSSAGFGDSRNKISRIIKSEKVKVNWKKENNPAQTVEIGDL 231
Query: 250 VSVSGKGRLKIGEINE--TKKGKFAVEIIRYL 161
+S+ G+GR++I + NE + +G+ + + R+L
Sbjct: 232 ISIKGRGRVQIVK-NEGLSHRGRVKLRLKRFL 262
[82][TOP]
>UniRef100_A4XKR0 RNA-binding S4 domain protein n=1 Tax=Caldicellulosiruptor
saccharolyticus DSM 8903 RepID=A4XKR0_CALS8
Length = 277
Score = 95.1 bits (235), Expect = 4e-18
Identities = 54/153 (35%), Positives = 87/153 (56%), Gaps = 4/153 (2%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G +G G+ R+K+GDIL++E K A V + E+ F+ T +D++G + + ++
Sbjct: 125 GTFIGQGLKRDKIGDILVKENK-ALVFVKEEVSLFITTHIDRIGRDRIKTEVVNKDDIDI 183
Query: 430 EPPRTNSFKTVEAS---LRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKT 260
NS K + S +R+DA+ S GF ISR DL+ V VNW + K VK
Sbjct: 184 SQFIQNSGKRIVCSVPSMRVDAIVSHGFGISREDASDLVRQFKVAVNWVYIDKPSYEVKE 243
Query: 259 GDVVSVSGKGRLKIGEI-NETKKGKFAVEIIRY 164
GD++SV GRLK+ ++ TKKG+ ++E++R+
Sbjct: 244 GDLISVRHHGRLKVEKVLTTTKKGRISIELLRF 276
[83][TOP]
>UniRef100_Q0I7W6 S4 domain protein n=1 Tax=Synechococcus sp. CC9311
RepID=Q0I7W6_SYNS3
Length = 259
Score = 94.7 bits (234), Expect = 5e-18
Identities = 51/143 (35%), Positives = 82/143 (57%), Gaps = 1/143 (0%)
Frame = -2
Query: 592 GISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYEPPRT- 416
G++ E LGD+ I+ ++GAQ + PE + + V +TC +PL L++ R
Sbjct: 116 GVADESLGDLWIRGDRGAQAICTPEAAAVLQGQQGSLREVIITCESLPLEGLQWPVQRVA 175
Query: 415 NSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDVVSVSG 236
+VEAS R+DA+ASAGF ISRSK+V I +R+NW V +K GD + +
Sbjct: 176 RRLSSVEASCRLDAIASAGFGISRSKVVKQIKEGRLRLNWEPVRLASRDLKVGDRLQLQD 235
Query: 235 KGRLKIGEINETKKGKFAVEIIR 167
+G +++ I TK+ ++ V+I+R
Sbjct: 236 RGSIEVMNIERTKRERWRVDILR 258
[84][TOP]
>UniRef100_A6NR04 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus
ATCC 29799 RepID=A6NR04_9BACE
Length = 266
Score = 94.7 bits (234), Expect = 5e-18
Identities = 54/151 (35%), Positives = 85/151 (56%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+ILG G+ REK+GD+L+ +L++ E+ DF++ L+ G + + + L AL
Sbjct: 117 GSILGLGLDREKVGDLLVSPGV-CDILLLKEIEDFLLLHLESAGRTRLKVAPVALSALTP 175
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ A+LR+DAVA++ F + RSK DLISS V++N TK V GDV
Sbjct: 176 PKVEVKLIRDTVATLRLDAVAASAFSLPRSKAADLISSGRVQLNHRECTKPDRTVAQGDV 235
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEIIRYL 161
+S G G+ + + +KKG+ +E+ RYL
Sbjct: 236 ISCRGMGKAAVKTVGGVSKKGRIIIEVERYL 266
[85][TOP]
>UniRef100_C6LCA4 S4 domain protein n=1 Tax=Bryantella formatexigens DSM 14469
RepID=C6LCA4_9FIRM
Length = 268
Score = 93.6 bits (231), Expect = 1e-17
Identities = 57/151 (37%), Positives = 84/151 (55%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA L TGI R +GDIL+ EE A + + + DF+ AL +V N V ++P ++Y
Sbjct: 120 GAALNTGIERSTIGDILV-EENAAWMFCLERMADFLSEALTRVRNTPVNVRQVPPEKIDY 178
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
P + + AS+R+D++ + F SRS LV LI V VN +T NG VK D+
Sbjct: 179 AP-KYELVRGSVASVRLDSLLALAFGASRSSLVGLIEGGKVFVNGRLITSNGYKVKENDL 237
Query: 250 VSVSGKGRLK-IGEINETKKGKFAVEIIRYL 161
+S G GR + +G + TKKG+ EI +Y+
Sbjct: 238 ISARGLGRFRYLGVSSSTKKGRLIAEIEKYI 268
[86][TOP]
>UniRef100_B0NAN5 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC
35704 RepID=B0NAN5_EUBSP
Length = 251
Score = 93.6 bits (231), Expect = 1e-17
Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA++ GI R KLGDILI++ K A + EL +++ L ++ + V S + Y
Sbjct: 103 GAVMNLGIERCKLGDILIEDGK-AILFAKEELAGYIMEHLTRIRHTTVKTSILSAFEDSY 161
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
EP R K AS+R+D V S + +SRSK+ LI V VN VT NG +K GD+
Sbjct: 162 EP-RYEELKGTVASVRLDTVLSLAYPLSRSKITGLIEGARVFVNGKLVTSNGYRLKEGDI 220
Query: 250 VSVSGKGRLKI-GEINETKKGKFAVEIIRYL 161
+SV GR+ G ++ETKKG++ V I +Y+
Sbjct: 221 LSVRKMGRIGYNGILSETKKGRYMVSIRKYI 251
[87][TOP]
>UniRef100_B5CLX5 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC
29176 RepID=B5CLX5_9FIRM
Length = 270
Score = 93.2 bits (230), Expect = 1e-17
Identities = 58/151 (38%), Positives = 84/151 (55%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAIL GI R + GDIL++E + A + E+ + V L V + V C L +EY
Sbjct: 122 GAILNLGIERSRTGDILLEEHR-AYLFAQTEIAELVSRELSNVRHTPVKCRLTELEGVEY 180
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
P RT + + +S+R+D++ F SRS+L LI V VN +T NG VK D+
Sbjct: 181 VP-RTEAVRGTVSSVRLDSLLPLAFSSSRSRLSGLIEGAKVFVNGKLITSNGYQVKENDL 239
Query: 250 VSVSGKGRLK-IGEINETKKGKFAVEIIRYL 161
+SV G G+ + IG +TKK + +VEI RY+
Sbjct: 240 ISVRGMGKFRYIGTGGKTKKNRLSVEIERYI 270
[88][TOP]
>UniRef100_Q7VAM2 RNA-binding protein, contains S4-like domain n=1
Tax=Prochlorococcus marinus RepID=Q7VAM2_PROMA
Length = 262
Score = 92.8 bits (229), Expect = 2e-17
Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 1/148 (0%)
Frame = -2
Query: 607 AILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYE 428
+I TG+ E++GD+ I ++GAQ + PE + + + +V + I L L
Sbjct: 114 SIAETGVKAEEIGDLWITGDRGAQAMCTPEALKLLQNNQGFIRDVEIKYKSIDLTDLRIP 173
Query: 427 PPRT-NSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
R +VEAS R+DA+ASAGF ISR+K++ I VR+NW T+ + GD
Sbjct: 174 FQRNPKKITSVEASKRLDAIASAGFGISRAKIISQIREGRVRLNWHTINNASRALTIGDR 233
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIR 167
V + GKG +++ + TKK ++ VE+IR
Sbjct: 234 VDLEGKGSIEVLNLEITKKDRWRVELIR 261
[89][TOP]
>UniRef100_C6J3C1 RNA-binding S4 domain-containing protein n=1 Tax=Paenibacillus sp.
oral taxon 786 str. D14 RepID=C6J3C1_9BACL
Length = 261
Score = 92.8 bits (229), Expect = 2e-17
Identities = 56/151 (37%), Positives = 86/151 (56%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAILG G+ R+K+GDI ++E+ G V++ E+ F+ L +V V V + L L
Sbjct: 112 GAILGLGLKRDKIGDIHVRED-GCHVIVAEEIAPFLQMNLHQVHRVNVMTDVLNLSELRT 170
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ ASLR+D +AS F++SR+K++ I + RVNW T T +K GDV
Sbjct: 171 MEKELEPMELTVASLRLDGIASDVFRLSRNKVLLPIKAGRCRVNWRTEEDPSTPLKVGDV 230
Query: 250 VSVSGKGRLKIGEINE-TKKGKFAVEIIRYL 161
V++ G GR K+ E TKKG+ V+I +++
Sbjct: 231 VALQGFGRFKVLEAGGLTKKGRHRVKIGKFV 261
[90][TOP]
>UniRef100_A3YVI0 RNA-binding S4 n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YVI0_9SYNE
Length = 264
Score = 92.4 bits (228), Expect = 3e-17
Identities = 54/148 (36%), Positives = 85/148 (57%), Gaps = 1/148 (0%)
Frame = -2
Query: 604 ILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYEP 425
+L G +LGD+ ++ ++GAQV++ P+L + +V +V V L L+
Sbjct: 117 LLAAGALDGELGDLWLRGDRGAQVIVDPQLAARLGGTTARVRSVEVKLEARGLDQLQPPT 176
Query: 424 -PRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDVV 248
P+ TVEASLR+DAVASAGF +SRS++ DL+ RVNW VT +KTGD +
Sbjct: 177 RPQPRQLATVEASLRLDAVASAGFGLSRSRMADLVRRGAARVNWQPVTTPSRDLKTGDRI 236
Query: 247 SVSGKGRLKIGEINETKKGKFAVEIIRY 164
+ +G L + I TK+ ++ +E+ R+
Sbjct: 237 QLENRGELTVLSIQPTKRQRWRLELQRH 264
[91][TOP]
>UniRef100_A6BE22 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM
13814 RepID=A6BE22_9FIRM
Length = 251
Score = 92.0 bits (227), Expect = 3e-17
Identities = 50/151 (33%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA++ GI R K+GDI+++++KG + + EL +++ L V + V S + ++Y
Sbjct: 103 GALMNLGIERSKVGDIIVEDQKGL-IFVKEELAEYIADNLTVVRHTNVNTSIGKGVKVDY 161
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
EP R K +S+R+D+V + + +SRSK+ I + V VN +T NG +K D+
Sbjct: 162 EP-RFEELKGTVSSIRLDSVLALAYPLSRSKITAQIEAGKVFVNGKLITSNGYRLKDNDI 220
Query: 250 VSVSGKGRLKI-GEINETKKGKFAVEIIRYL 161
+SV GR+ G ++ETKKG++ + + +Y+
Sbjct: 221 ISVRKMGRIAYDGILSETKKGRYLISVRKYI 251
[92][TOP]
>UniRef100_A8W1S5 Putative uncharacterized protein n=1 Tax=Bacillus selenitireducens
MLS10 RepID=A8W1S5_9BACI
Length = 257
Score = 91.3 bits (225), Expect = 6e-17
Identities = 56/147 (38%), Positives = 82/147 (55%), Gaps = 1/147 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G++ G GI REK GDIL +E+ QV++ E+ D++ LDKVG V + PL +
Sbjct: 108 GSLTGMGIRREKFGDILSLDER-FQVVVCHEIADYMSLNLDKVGKTKVRAEEKPLSDILP 166
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
R +S+R+D + + G+ +SRSK LI S+ V+VNW TV ++ DV
Sbjct: 167 NELRLVWKHETVSSMRLDVIIAEGYHLSRSKAKPLIQSEKVKVNWRTVNDPAFTIEEEDV 226
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEI 173
VSV G GR+ I I T+KGK + +
Sbjct: 227 VSVRGYGRMYITAIEGNTRKGKIKLTL 253
[93][TOP]
>UniRef100_Q05U21 RNA-binding S4 n=1 Tax=Synechococcus sp. RS9916 RepID=Q05U21_9SYNE
Length = 263
Score = 90.9 bits (224), Expect = 7e-17
Identities = 52/148 (35%), Positives = 87/148 (58%), Gaps = 1/148 (0%)
Frame = -2
Query: 607 AILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYE 428
AIL GI LGD+ I+ ++GAQ+L PE + +V +V + + P+ +L+
Sbjct: 115 AILELGIEAGHLGDLWIRGDRGAQLLCTPEAAVALHGRSGRVRDVDIQLEERPVASLQLP 174
Query: 427 PPRT-NSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
R F +VEAS R+DA+ASAGF +SR+K+VD I S +R+NW +V + ++ GD
Sbjct: 175 QSRVPKRFASVEASCRLDAIASAGFGLSRAKVVDQIRSGRLRLNWQSVRQASKDLRVGDR 234
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIR 167
+ + +G +++ + TKK ++ V + R
Sbjct: 235 LQLQDRGSVEVLALERTKKDRWRVHMER 262
[94][TOP]
>UniRef100_C4VMP0 Cell division protein n=3 Tax=Lactobacillus jensenii
RepID=C4VMP0_9LACO
Length = 274
Score = 90.9 bits (224), Expect = 7e-17
Identities = 51/153 (33%), Positives = 85/153 (55%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G +LG+G+S LGDI+ + Q I ++DFV + ++G V V +IPL +
Sbjct: 118 GTLLGSGLSPASLGDIITDGKGNWQFFISDIMLDFVCREITRIGKVAVRLDRIPLKQILN 177
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ K V SLRIDA+ +A + SR+ + + I +++++NW + + IV DV
Sbjct: 178 IEDDVQNVKLVVNSLRIDAILAALTRTSRNIINNQIEKENIKLNWHKINNSNIIVTVNDV 237
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL*KE 152
+SV GR++I I T+KGK+ +E +L K+
Sbjct: 238 LSVRHFGRIEISNITTTRKGKYRLEANLWLSKK 270
[95][TOP]
>UniRef100_Q182V5 Putative RNA-binding cell division protein n=1 Tax=Clostridium
difficile 630 RepID=Q182V5_CLOD6
Length = 261
Score = 90.5 bits (223), Expect = 1e-16
Identities = 52/146 (35%), Positives = 80/146 (54%), Gaps = 1/146 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+ILG GI REK+GDI+I + QV++ ++ DF++ L+KV V +I +
Sbjct: 112 GSILGLGIKREKIGDIIIHDSF-CQVVVSSDICDFIIVNLEKVSRNNVIVKEISRENIVN 170
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ +S R+D V S + ISR I+ + V VN+ +T IVK D+
Sbjct: 171 SSSKYKEVSFTVSSDRLDCVISGIYNISRQDSAKYINGEKVHVNYEKITSTSKIVKNDDL 230
Query: 250 VSVSGKGRLKIGEINE-TKKGKFAVE 176
+S+ GKGR K+ +I + TKKGK V+
Sbjct: 231 ISIRGKGRAKVTQIGDITKKGKIKVQ 256
[96][TOP]
>UniRef100_C9XMY6 Putative RNA-binding cell division protein n=2 Tax=Clostridium
difficile RepID=C9XMY6_CLODI
Length = 261
Score = 90.5 bits (223), Expect = 1e-16
Identities = 52/146 (35%), Positives = 80/146 (54%), Gaps = 1/146 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+ILG GI REK+GDI+I + QV++ ++ DF++ L+KV V +I +
Sbjct: 112 GSILGLGIKREKIGDIIIHDSF-CQVVVSSDICDFIIVNLEKVSRNNVIVKEISRENIVN 170
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ +S R+D V S + ISR I+ + V VN+ +T IVK D+
Sbjct: 171 SSSKYKEVSFTVSSDRLDCVISGIYNISRQDSAKYINGEKVHVNYEKITSTSKIVKNDDL 230
Query: 250 VSVSGKGRLKIGEINE-TKKGKFAVE 176
+S+ GKGR K+ +I + TKKGK V+
Sbjct: 231 ISIRGKGRAKVTQIGDITKKGKIKVQ 256
[97][TOP]
>UniRef100_A6CUJ0 S4 domain protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CUJ0_9BACI
Length = 258
Score = 90.5 bits (223), Expect = 1e-16
Identities = 53/145 (36%), Positives = 79/145 (54%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+++ G+ REK GDIL+ ++ Q++ E+ DFV +VG VT K+PL + +
Sbjct: 109 GSLMSIGLKREKFGDILMNSDR-VQMITASEISDFVEMNFQEVGRNKVTLEKVPLDRMVH 167
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
T +SLR+D + SA + +SR K+ LI+ V+VNW V V GDV
Sbjct: 168 SSEEWREALTTVSSLRLDVILSALYNVSRQKVQTLIAGGVVKVNWRVVESPAFEVAEGDV 227
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
S+ G GR K+ I +TKK KF +
Sbjct: 228 FSMRGHGRSKLISIEGKTKKDKFRI 252
[98][TOP]
>UniRef100_A3Z6A1 Putative uncharacterized protein n=1 Tax=Synechococcus sp. RS9917
RepID=A3Z6A1_9SYNE
Length = 264
Score = 89.7 bits (221), Expect = 2e-16
Identities = 49/148 (33%), Positives = 86/148 (58%), Gaps = 1/148 (0%)
Frame = -2
Query: 607 AILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYE 428
A+ G + E+LGD+ I+ ++GAQ+L PE D + ++ +V + C +P+ L+
Sbjct: 116 ALAPLGAAPEQLGDVWIRGDRGAQLLCTPEAADRLNGRKGRLRDVEIHCETVPIDGLQLP 175
Query: 427 PPRT-NSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
R F +VEAS R+DA+ASAGF +SRSK+ I S +R+NW + + +K GD
Sbjct: 176 VRRAIKRFSSVEASCRLDAIASAGFGLSRSKVSQEIRSGQLRLNWEPIRQASRELKVGDR 235
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIR 167
+ + +G +++ + TK+ ++ V + R
Sbjct: 236 LQLQNRGSVEVLSLTLTKRERWRVAMER 263
[99][TOP]
>UniRef100_UPI00017F515E putative RNA-binding cell division protein n=1 Tax=Clostridium
difficile QCD-23m63 RepID=UPI00017F515E
Length = 261
Score = 89.4 bits (220), Expect = 2e-16
Identities = 51/146 (34%), Positives = 80/146 (54%), Gaps = 1/146 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+ILG GI REK+GDI+I + QV++ ++ DF++ L+KV V +I +
Sbjct: 112 GSILGLGIKREKIGDIIIHDSF-CQVVVSSDICDFIIVNLEKVSRNNVIVKEISRENIVN 170
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ +S R+D V S + ISR I+ + V VN+ +T IVK D+
Sbjct: 171 SSSKYKEVSFTVSSDRLDCVISGIYNISRQDSAKYINGEKVHVNYEKITSTSKIVKNDDL 230
Query: 250 VSVSGKGRLKIGEINE-TKKGKFAVE 176
+S+ GKGR K+ +I + T+KGK V+
Sbjct: 231 ISIRGKGRAKVTQIGDITRKGKIKVQ 256
[100][TOP]
>UniRef100_UPI0001789A15 RNA-binding S4 domain protein n=1 Tax=Geobacillus sp. Y412MC10
RepID=UPI0001789A15
Length = 261
Score = 88.6 bits (218), Expect = 4e-16
Identities = 51/150 (34%), Positives = 83/150 (55%), Gaps = 1/150 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+ILG GI R K+GDI + + G ++ ++ F+ L +V V V +PL L+
Sbjct: 112 GSILGLGIKRSKIGDIHVLAD-GCHAVVADDISAFLHLNLSQVHRVHVMTDLLPLDKLQV 170
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ +S+R+D +AS ++ISR+K++ I + RVNW T +K GDV
Sbjct: 171 ARTNFEAMDITVSSMRLDGIASDAYRISRTKIIVPIKAGRCRVNWKVEEDPSTNLKEGDV 230
Query: 250 VSVSGKGRLKIGEINE-TKKGKFAVEIIRY 164
VS+ G GR K+ E TKKG++ +++ +Y
Sbjct: 231 VSIQGFGRFKVLETGGLTKKGRYRIKVGKY 260
[101][TOP]
>UniRef100_UPI00006DCC3E hypothetical protein CdifQ_04003052 n=1 Tax=Clostridium difficile
QCD-32g58 RepID=UPI00006DCC3E
Length = 252
Score = 88.6 bits (218), Expect = 4e-16
Identities = 51/142 (35%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+ILG GI REK+GDI+I + QV++ ++ DF++ L+KV V +I +
Sbjct: 112 GSILGLGIKREKIGDIIIHDSF-CQVVVSSDICDFIIVNLEKVSRNNVIVKEISRENIVN 170
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ +S R+D V S + ISR I+ + V VN+ +T IVK D+
Sbjct: 171 SSSKYKEVSFTVSSDRLDCVISGIYNISRQDSAKYINGEKVHVNYEKITSTSKIVKNDDL 230
Query: 250 VSVSGKGRLKIGEINE-TKKGK 188
+S+ GKGR K+ +I + TKKGK
Sbjct: 231 ISIRGKGRAKVTQIGDITKKGK 252
[102][TOP]
>UniRef100_Q74JX8 Putative uncharacterized protein n=1 Tax=Lactobacillus johnsonii
RepID=Q74JX8_LACJO
Length = 265
Score = 88.6 bits (218), Expect = 4e-16
Identities = 49/146 (33%), Positives = 81/146 (55%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + GI + GDI+ E Q I EL D+ + +D++G V S++PL +
Sbjct: 112 GVLTHLGIELDTFGDIINDENGNWQFFIKAELKDYFLEEIDRIGRTKVKLSELPLSKVLV 171
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ + +V SLR+DAV SA +SRS++ +I + +V++NW VT++ I+ D+
Sbjct: 172 QEDDSEEMTSVAISLRLDAVISAITNLSRSQVKKIIEAGEVKLNWHLVTQSNIIISVQDM 231
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEI 173
+S+ GR +I + TKKGK +EI
Sbjct: 232 LSIRHYGRYEIINLATTKKGKKRLEI 257
[103][TOP]
>UniRef100_Q3AZI4 RNA-binding S4 n=1 Tax=Synechococcus sp. CC9902 RepID=Q3AZI4_SYNS9
Length = 261
Score = 88.2 bits (217), Expect = 5e-16
Identities = 51/148 (34%), Positives = 84/148 (56%), Gaps = 1/148 (0%)
Frame = -2
Query: 607 AILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYE 428
A+ G + +++GD+ ++ ++G Q L PE + +V +V + C +P+ AL
Sbjct: 113 ALQELGAAPDQIGDLWVRGDRGGQGLCTPESAARLHEQRGRVRDVEIRCEALPIEALHLP 172
Query: 427 PPRT-NSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
RT +TVEAS RIDA+ASAGF +SR+K+V I + +RVNW V V GD
Sbjct: 173 AQRTPRILQTVEASCRIDAIASAGFGLSRAKIVGHIKAGRLRVNWHDVRLASRDVGVGDR 232
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIR 167
+ + +G L++ + TK+ ++ VE+ R
Sbjct: 233 LQLQDRGALEVLSLTRTKRERWRVELRR 260
[104][TOP]
>UniRef100_A5GN94 Putative uncharacterized protein SynWH7803_1983 n=1
Tax=Synechococcus sp. WH 7803 RepID=A5GN94_SYNPW
Length = 259
Score = 88.2 bits (217), Expect = 5e-16
Identities = 47/148 (31%), Positives = 88/148 (59%), Gaps = 1/148 (0%)
Frame = -2
Query: 607 AILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYE 428
A++ +S + +GD+ ++ ++GAQ + PE + + +V +V + +PL AL++
Sbjct: 111 ALMQLDVSADSIGDLWLRGDRGAQAVCTPEAGEQLNGLTGQVRDVPLLLETVPLDALQWP 170
Query: 427 PPRT-NSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
RT ++VEAS R+DA+ASAGF +SRSK+ I +R+NW + + VK GD
Sbjct: 171 ARRTPRLLRSVEASCRLDAIASAGFGLSRSKVTREIKEGRLRLNWGAIRQASRDVKVGDQ 230
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIR 167
+ + +G +++ + TK+ ++ VE++R
Sbjct: 231 LQLQDRGSVEVLSLTLTKRERWRVEMMR 258
[105][TOP]
>UniRef100_C7WFB4 RNA-binding protein S4 n=1 Tax=Enterococcus faecalis DS5
RepID=C7WFB4_ENTFA
Length = 260
Score = 88.2 bits (217), Expect = 5e-16
Identities = 54/145 (37%), Positives = 78/145 (53%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G ++ G+ RE GDI+ +K QV I E+ FVV +DK+G + V + +
Sbjct: 110 GTLMNVGVRREAFGDIISDGDKW-QVFIAQEVAGFVVNQVDKIGKITVRLEERDYTQILI 168
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+T +SLR+D+V SA F ISR + LI S V+VNW T+ + D+
Sbjct: 169 PKDGWQEERTTMSSLRLDSVISAVFNISRQRSKQLIESGKVKVNWTETTRPDFALDLLDI 228
Query: 250 VSVSGKGRLKIGEIN-ETKKGKFAV 179
VS+ G GRL+I E+ +TKK KF V
Sbjct: 229 VSIRGFGRLQIQELEVKTKKEKFRV 253
[106][TOP]
>UniRef100_C4VCH0 S4 domain protein n=1 Tax=Enterococcus faecalis TUSoD Ef11
RepID=C4VCH0_ENTFA
Length = 260
Score = 88.2 bits (217), Expect = 5e-16
Identities = 54/145 (37%), Positives = 78/145 (53%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G ++ G+ RE GDI+ +K QV I E+ FVV +DK+G + V + +
Sbjct: 110 GTLMNVGVRREAFGDIISDGDKW-QVFIAQEVAGFVVNQVDKIGKITVRLEERDYTQILI 168
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+T +SLR+D+V SA F ISR + LI S V+VNW T+ + D+
Sbjct: 169 PKDGWQEERTTMSSLRLDSVISAVFNISRQRSKQLIESGKVKVNWTETTRPDFALDLLDI 228
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
VS+ G GRL+I E+ +TKK KF V
Sbjct: 229 VSIRGFGRLQIQELEGKTKKEKFRV 253
[107][TOP]
>UniRef100_C0XKK0 Ribosomal protein S4e n=1 Tax=Lactobacillus hilgardii ATCC 8290
RepID=C0XKK0_LACHI
Length = 264
Score = 88.2 bits (217), Expect = 5e-16
Identities = 53/150 (35%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+++G GI R +GDI+ K Q ++ E+ D+V +D +G + V I +
Sbjct: 112 GSLMGVGIERNVVGDIITDGLKW-QFMVQSEMADYVKAQVDHIGKIKVMLEDISPEGVIA 170
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ + T +SLR+DA+ S GF ISR +L+ + DVR+NW T+ + T D+
Sbjct: 171 PVDESETLTTTVSSLRVDALISDGFHISRHHAKELVDTGDVRINWVDTTRPDFELSTKDI 230
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEIIRY 164
+SV G GRL I EI TKK K + I Y
Sbjct: 231 ISVRGYGRLVIKEITGMTKKDKIRIIISVY 260
[108][TOP]
>UniRef100_C0X322 Ribosomal protein S4e n=19 Tax=Enterococcus faecalis
RepID=C0X322_ENTFA
Length = 260
Score = 88.2 bits (217), Expect = 5e-16
Identities = 54/145 (37%), Positives = 78/145 (53%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G ++ G+ RE GDI+ +K QV I E+ FVV +DK+G + V + +
Sbjct: 110 GTLMNVGVRREAFGDIISDGDKW-QVFIAQEVAGFVVNQVDKIGKITVRLEERDYTQILI 168
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+T +SLR+D+V SA F ISR + LI S V+VNW T+ + D+
Sbjct: 169 PKDGWQEERTTMSSLRLDSVISAVFNISRQRSKQLIESGKVKVNWTETTRPDFALDLLDI 228
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
VS+ G GRL+I E+ +TKK KF V
Sbjct: 229 VSIRGFGRLQIQELEGKTKKEKFRV 253
[109][TOP]
>UniRef100_B6FYW3 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
13275 RepID=B6FYW3_9CLOT
Length = 261
Score = 88.2 bits (217), Expect = 5e-16
Identities = 52/146 (35%), Positives = 84/146 (57%), Gaps = 1/146 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G++LG GI REK+GDILI E+ QV++ ++ D++V L KV V +I L+
Sbjct: 112 GSLLGLGIKREKIGDILIHEDF-CQVIVSSDICDYIVMNLTKVATNSVKVKEINREELKT 170
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ +S R+D V S + ISR + + I+++ V +N+ +T V +GD+
Sbjct: 171 SEKKYKDISFTVSSDRLDCVISGIYNISRQESLKYINAERVHLNYEKITSASKTVSSGDL 230
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVE 176
+SV GKGR ++ EI ET+KG+ V+
Sbjct: 231 ISVRGKGRSEVVEIGGETRKGRTRVK 256
[110][TOP]
>UniRef100_A4CR99 RNA-binding S4 n=1 Tax=Synechococcus sp. WH 7805 RepID=A4CR99_SYNPV
Length = 259
Score = 88.2 bits (217), Expect = 5e-16
Identities = 46/148 (31%), Positives = 88/148 (59%), Gaps = 1/148 (0%)
Frame = -2
Query: 607 AILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYE 428
A++ +S + +GD+ ++ ++GAQ + PE + + +V +V + +PL AL++
Sbjct: 111 ALMRLDVSADAIGDLWLRGDRGAQAICTPEAGEHLNGLTGQVRDVPLLLETVPLEALQWP 170
Query: 427 PPRT-NSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
RT ++VEAS R+DA+ASAGF +SRSK+ I +R+NW + + +K GD
Sbjct: 171 ARRTPRLLRSVEASCRLDAIASAGFGLSRSKVTREIKEGRLRLNWGAIRQASRDLKVGDQ 230
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIR 167
+ + +G +++ + TK+ ++ VE++R
Sbjct: 231 LQLQDRGSVEVLSLTLTKRERWRVEMMR 258
[111][TOP]
>UniRef100_B8FT38 RNA-binding S4 domain protein n=1 Tax=Desulfitobacterium hafniense
DCB-2 RepID=B8FT38_DESHD
Length = 265
Score = 87.8 bits (216), Expect = 6e-16
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 2/151 (1%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+++G G+ RE +GDI + E+ V + E+ DF+++ DK G + ++ + +
Sbjct: 114 GSLMGLGLKREVIGDIRLTEQC-CFVAVAQEIADFLLSQWDKAGRERI---RVEAVEKDV 169
Query: 430 EPP--RTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTG 257
E P + + AS RIDAVAS+GF +SR+ +LI V+ N V K VK G
Sbjct: 170 EIPLEQGKERRITAASSRIDAVASSGFNVSRTMFQELIQQGKVKRNDRMVAKADLEVKPG 229
Query: 256 DVVSVSGKGRLKIGEINETKKGKFAVEIIRY 164
D++S G GR+++ E ET+KG+ A +I Y
Sbjct: 230 DILSCRGYGRMRLLEFQETRKGRMAWNVILY 260
[112][TOP]
>UniRef100_C7XYV5 Photosystem II S4 domain-containing protein n=2 Tax=Lactobacillus
jensenii RepID=C7XYV5_9LACO
Length = 274
Score = 87.8 bits (216), Expect = 6e-16
Identities = 46/153 (30%), Positives = 85/153 (55%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G ++G+G++ LGDI+ + Q + + DFV + ++G V V+ +++ L +
Sbjct: 118 GTLVGSGLNLSSLGDIITDGKGKWQFFVSEAMADFVCQEIKRIGKVAVSLNEVSLKQIVN 177
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ K + SLRIDA+ +A K SR+ + LI +++++NW + + I+ DV
Sbjct: 178 IEDDIQNTKIIVNSLRIDAILAALTKSSRNIVKQLIEKENIKLNWHKIDNSNIIISVNDV 237
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL*KE 152
+SV GR++I I T+KGK+ +E +L K+
Sbjct: 238 LSVRHYGRIEISNITNTRKGKYRLEANLWLSKK 270
[113][TOP]
>UniRef100_C2E295 Ribosomal protein S4e n=1 Tax=Lactobacillus jensenii JV-V16
RepID=C2E295_9LACO
Length = 226
Score = 87.8 bits (216), Expect = 6e-16
Identities = 46/153 (30%), Positives = 85/153 (55%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G ++G+G++ LGDI+ + Q + + DFV + ++G V V+ +++ L +
Sbjct: 70 GTLVGSGLNLSSLGDIITDGKGKWQFFVSEAMADFVCQEIKRIGKVAVSLNEVSLKQIVN 129
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ K + SLRIDA+ +A K SR+ + LI +++++NW + + I+ DV
Sbjct: 130 IEDDIQNTKIIVNSLRIDAILAALTKSSRNIVKQLIEKENIKLNWHKIDNSNIIISVNDV 189
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRYL*KE 152
+SV GR++I I T+KGK+ +E +L K+
Sbjct: 190 LSVRHYGRIEISNITNTRKGKYRLEANLWLSKK 222
[114][TOP]
>UniRef100_Q24TG8 Putative uncharacterized protein n=1 Tax=Desulfitobacterium
hafniense Y51 RepID=Q24TG8_DESHY
Length = 268
Score = 87.4 bits (215), Expect = 8e-16
Identities = 52/149 (34%), Positives = 82/149 (55%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+++G G+ RE +GDI + E+ V + E+ DF+++ DK G + + +E
Sbjct: 117 GSLMGLGLKREVIGDIRLTEQC-CFVAVAQEIADFLLSQWDKAGRERIRVEAVEQ-NVEI 174
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ + AS RIDAVAS+GF +SR+ +LI V+ N V K VK GD+
Sbjct: 175 PLEQGKERRITAASSRIDAVASSGFNVSRTMFQELIQQGKVKRNDRMVAKADLEVKPGDI 234
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIRY 164
+S G GR+++ E ET+KG+ A +I Y
Sbjct: 235 LSCRGYGRMRLLEFQETRKGRIAWNVILY 263
[115][TOP]
>UniRef100_A2C4D0 Uncharacterized conserved protein, contains S4-like domain n=1
Tax=Prochlorococcus marinus str. NATL1A
RepID=A2C4D0_PROM1
Length = 262
Score = 87.4 bits (215), Expect = 8e-16
Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Frame = -2
Query: 580 EKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYEPPRTNS-FK 404
+ +GDI + ++GAQ + + D + + K+ V +T + L +E R
Sbjct: 123 DDIGDIWLIRDRGAQAICTKKCADSINQKIGKLREVEITIHALDLNEMEIPFNRPKKVIN 182
Query: 403 TVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDVVSVSGKGRL 224
TVEAS RIDA+ASAGF +SRSK++ I +R+NWA + V GD++ + KG L
Sbjct: 183 TVEASTRIDAIASAGFGLSRSKVIKQIKEGCLRLNWALNEQPSKSVNIGDLIHLDKKGSL 242
Query: 223 KIGEINETKKGKFAVEIIR 167
KI I++TKK ++ ++++R
Sbjct: 243 KILNIDKTKKERWRIKLLR 261
[116][TOP]
>UniRef100_C2D1X7 Ribosomal protein S4e n=1 Tax=Lactobacillus brevis subsp.
gravesensis ATCC 27305 RepID=C2D1X7_LACBR
Length = 264
Score = 87.4 bits (215), Expect = 8e-16
Identities = 52/150 (34%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+++G GI R +GDI+ K Q ++ E+ D+V +D +G + V I +
Sbjct: 112 GSLMGAGIERNVVGDIITDGLKW-QFMVQSEMADYVKAQVDHIGKIKVKLEDISPEGVIT 170
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ + T +SLR+DA+ S GF ISR +L+ + DVR+NW T+ + T D+
Sbjct: 171 PVDESETLTTTVSSLRVDALISDGFHISRHHAKELVDAGDVRINWVDTTRPDFELSTKDI 230
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEIIRY 164
+SV G GR+ I EI TKK K + I Y
Sbjct: 231 ISVRGYGRIVIKEITGMTKKDKIRIIISVY 260
[117][TOP]
>UniRef100_D0CGM7 Photosystem II S4 domain protein n=1 Tax=Synechococcus sp. WH 8109
RepID=D0CGM7_9SYNE
Length = 258
Score = 87.0 bits (214), Expect = 1e-15
Identities = 43/143 (30%), Positives = 84/143 (58%), Gaps = 1/143 (0%)
Frame = -2
Query: 592 GISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYEPPRT- 416
G++ +K+GD+ ++ ++G Q + P + + L V V + C +P+ L+ R+
Sbjct: 115 GVNADKIGDLWVRGDRGGQGVCTPSAAEALHGRLGAVRKVEIRCESLPIEQLQQPVKRSV 174
Query: 415 NSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDVVSVSG 236
+ +TVEAS R+DA+ASAGF +SR+K+V + + +R+NW V + + GD + +
Sbjct: 175 RTLQTVEASCRLDAIASAGFGLSRAKIVTHVKAGRLRLNWGNVRQASRELVVGDRLQLQD 234
Query: 235 KGRLKIGEINETKKGKFAVEIIR 167
+G +++ + TK+ ++ VE+ R
Sbjct: 235 RGSVEVLSLTRTKRERWRVELRR 257
[118][TOP]
>UniRef100_C6J9K9 Putative uncharacterized protein n=1 Tax=Ruminococcus sp.
5_1_39BFAA RepID=C6J9K9_9FIRM
Length = 250
Score = 87.0 bits (214), Expect = 1e-15
Identities = 54/151 (35%), Positives = 85/151 (56%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+L G+ R +GDI++Q+ K A ++ +F + L +V + + +K+ + E+
Sbjct: 102 GALLNLGVDRSVIGDIVVQK-KAAWFFCQNKMTEFFLENLCRVRHTNILITKVED-SDEF 159
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
P S AS+R+D++ S FK SRS +V I V VN +T NG K GD+
Sbjct: 160 PRPVLESVSGTCASVRLDSLISLAFKTSRSSMVSYIEGGQVFVNGKLITSNGYEPKDGDI 219
Query: 250 VSVSGKGRLKI-GEINETKKGKFAVEIIRYL 161
+SV GKGR G ++TKKG+ +V I+RY+
Sbjct: 220 ISVRGKGRFIFDGVSHQTKKGRCSVRIMRYV 250
[119][TOP]
>UniRef100_Q2B058 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911
RepID=Q2B058_9BACI
Length = 257
Score = 86.7 bits (213), Expect = 1e-15
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+++ G+ R K GDI +Q+E+ AQ + E+ D+V L+ +G VT K+PL
Sbjct: 108 GSLMALGLKRGKFGDITVQDER-AQFFVSREIEDYVSMQLESIGKASVTLKKLPLEKAIT 166
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+DAV SA + ISR K + V+VNW V + DV
Sbjct: 167 AAGAWEESSASVSSLRLDAVISAIYNISRQKSQLFVQQGLVKVNWGQVEDPSFVCGEADV 226
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
+SV GKGR KI E+ +TKK K+ +
Sbjct: 227 LSVRGKGRSKIIEVEGKTKKDKWRI 251
[120][TOP]
>UniRef100_C2E5X4 Possible ribosomal protein S4e n=1 Tax=Lactobacillus johnsonii ATCC
33200 RepID=C2E5X4_LACJO
Length = 265
Score = 86.7 bits (213), Expect = 1e-15
Identities = 47/146 (32%), Positives = 80/146 (54%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + GI + GDI+ E Q + EL D+ + +D++G V S++PL +
Sbjct: 112 GVLTHLGIELDTFGDIINDENGNWQFFVKAELKDYFLEEIDRIGRTKVKLSELPLSKVLV 171
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ + +V SLR+DAV SA +SRS++ +I + + ++NW VT++ I+ D+
Sbjct: 172 QEDDSEEMTSVAISLRLDAVISAITNLSRSQVKKIIEAGEAKLNWHLVTQSNIIISVQDM 231
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEI 173
+S+ GR +I + TKKGK +EI
Sbjct: 232 LSIRHYGRYEIINLATTKKGKKRLEI 257
[121][TOP]
>UniRef100_C0BW48 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM
15053 RepID=C0BW48_9CLOT
Length = 251
Score = 86.7 bits (213), Expect = 1e-15
Identities = 53/151 (35%), Positives = 80/151 (52%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA++ GI R KLGDI I GA + + EL ++ L ++ + V + P Y
Sbjct: 103 GALMNLGIERSKLGDI-IAGSFGAFLFVKEELAAYITGELTRIRHTAVQAVQRPAAEFTY 161
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
EP + K S+R+D V S + +SRSKL I V VN +T NG +K D
Sbjct: 162 EP-KYEEMKGTVPSVRLDTVLSVAWPLSRSKLTAYIEGGKVFVNGKLITSNGYHLKESDR 220
Query: 250 VSVSGKGRLKI-GEINETKKGKFAVEIIRYL 161
+SV G GRL G +++TKKG++ + + +Y+
Sbjct: 221 ISVRGMGRLTYEGILSQTKKGRYMISVHKYI 251
[122][TOP]
>UniRef100_Q7U8T0 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 8102
RepID=Q7U8T0_SYNPX
Length = 291
Score = 86.3 bits (212), Expect = 2e-15
Identities = 48/148 (32%), Positives = 82/148 (55%), Gaps = 1/148 (0%)
Frame = -2
Query: 607 AILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYE 428
A+ G E LGD+ ++ ++G Q LI P + + ++ +V + C + + L+
Sbjct: 143 ALHNMGAQPEDLGDLWVRGDRGGQGLISPNAAELLQGRRGQLRDVEIHCDVLEITQLQLP 202
Query: 427 PPRT-NSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
R TVEAS RIDA+ASAGF +SRSK+V I + +R+NW V + +K GD
Sbjct: 203 AQRNPKRLTTVEASCRIDAIASAGFGLSRSKVVSQIKAGRLRLNWEPVLQGSRELKVGDR 262
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIR 167
+ + +G L++ TK+ ++ +E++R
Sbjct: 263 LQLQDRGSLELLSCTLTKRERWRIELMR 290
[123][TOP]
>UniRef100_C9L5V3 RNA-binding S4 n=1 Tax=Blautia hansenii DSM 20583
RepID=C9L5V3_RUMHA
Length = 250
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/150 (36%), Positives = 85/150 (56%), Gaps = 1/150 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+IL GI R K+GDIL++E+ GA V +VDF++ + ++ + V +I
Sbjct: 102 GSILNLGIERCKIGDILVEED-GAFVFCHTSMVDFLIDEICRIKHTPVKAERITEENQLP 160
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
P R TV AS R+D+V F+ SRS ++ I S V +N +V NG ++K GD+
Sbjct: 161 TPKREEISGTV-ASPRLDSVIGLAFRTSRSSMISYIESGKVFINGKSVVSNGYVLKEGDI 219
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEIIRY 164
VSV GKG+ + + ++TKK + V + +Y
Sbjct: 220 VSVRGKGKFQFHSVTSKTKKNRSHVILYKY 249
[124][TOP]
>UniRef100_A5ZQL4 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC
29174 RepID=A5ZQL4_9FIRM
Length = 206
Score = 86.3 bits (212), Expect = 2e-15
Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+L GI R +GDIL+Q+ A + ++ D+++ L +V + + S + LE+
Sbjct: 58 GAVLNLGIERAVIGDILVQKHT-AWIFCHEKIADYIIENLTRVRHTTMKLSMVD--NLEH 114
Query: 430 EP-PRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGD 254
P P AS+R+DA+ F+ SR+ +V I V VN +T NG K GD
Sbjct: 115 IPEPEFQEINGTCASVRLDALIGLAFQTSRNSMVPFIEGGQVFVNGKLITSNGYEPKDGD 174
Query: 253 VVSVSGKGRLKI-GEINETKKGKFAVEIIRY 164
++SV GKGR + G +TKKG+ +V+++RY
Sbjct: 175 IISVRGKGRFRYEGVSRQTKKGRNSVKLLRY 205
[125][TOP]
>UniRef100_Q65JV9 RNA-binding protein n=1 Tax=Bacillus licheniformis ATCC 14580
RepID=Q65JV9_BACLD
Length = 258
Score = 85.9 bits (211), Expect = 2e-15
Identities = 50/143 (34%), Positives = 80/143 (55%), Gaps = 1/143 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+++G G+ R+K GD++ + Q + E+ DFV T L ++G V V+ KIPL L+
Sbjct: 109 GSLMGIGLKRQKFGDLIFSDGTW-QFICSEEVADFVFTQLTQIGKVKVSLEKIPLSKLKV 167
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+DA+ SA + SR K L+ + V+VNW + + GD+
Sbjct: 168 PEQDVEIRDDTVSSLRLDAICSAMSRQSRQKAQVLVKNGLVKVNWKVIEDPSYALAEGDM 227
Query: 250 VSVSGKGRLKIGEIN-ETKKGKF 185
VS+ G GR ++ I+ +TKKGK+
Sbjct: 228 VSIRGFGRFRMKNIDGKTKKGKW 250
[126][TOP]
>UniRef100_C0WQD5 Ribosomal protein S4e n=1 Tax=Lactobacillus buchneri ATCC 11577
RepID=C0WQD5_LACBU
Length = 264
Score = 85.9 bits (211), Expect = 2e-15
Identities = 52/150 (34%), Positives = 79/150 (52%), Gaps = 1/150 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+++G GI R +GDI+ K Q ++ E+ D+V +D +G + V I +
Sbjct: 112 GSLMGVGIERNVVGDIITDGLKW-QFMVQSEMADYVKAQVDHIGKIKVKLEDISPEGVIA 170
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ + +SLR+DA+ S GF ISR +L+ + DVR+NW T+ + T D+
Sbjct: 171 PVDESETLTITVSSLRVDALISDGFHISRHHAKELVDTGDVRINWVDTTRPDFELSTKDI 230
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEIIRY 164
+SV G GRL I EI TKK K + I Y
Sbjct: 231 ISVRGYGRLVIKEITGMTKKDKIRIIISVY 260
[127][TOP]
>UniRef100_Q46JA9 RNA-binding S4 n=1 Tax=Prochlorococcus marinus str. NATL2A
RepID=Q46JA9_PROMT
Length = 262
Score = 85.5 bits (210), Expect = 3e-15
Identities = 48/139 (34%), Positives = 79/139 (56%), Gaps = 1/139 (0%)
Frame = -2
Query: 580 EKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYEPPRTNS-FK 404
+ +GDI + ++GAQ + + D + + K+ V + + L +E R
Sbjct: 123 DDIGDIWLIRDRGAQAICTKKCADSINQKIGKLREVEIIIHALDLNEMEIPFNRPEKVIN 182
Query: 403 TVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDVVSVSGKGRL 224
TVEAS RIDA+ASAGF +SRSK++ I +R+NWA + V GD++ + KG L
Sbjct: 183 TVEASTRIDAIASAGFGLSRSKIIKQIKEGCLRLNWALNDQPSKSVNIGDLIHLEKKGSL 242
Query: 223 KIGEINETKKGKFAVEIIR 167
KI I++TKK ++ ++++R
Sbjct: 243 KILNIDKTKKERWRIKLLR 261
[128][TOP]
>UniRef100_A7Z4G1 YlmH n=1 Tax=Bacillus amyloliquefaciens FZB42 RepID=A7Z4G1_BACA2
Length = 256
Score = 85.5 bits (210), Expect = 3e-15
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 1/149 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+++G G+ R+K GD++ EE Q+++ E+ DFV T L K G V KI L AL
Sbjct: 107 GSLMGIGLKRQKYGDLIFSEE-AVQLIVSGEIADFVSTQLTKAGKAPVKLEKIELSALHI 165
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+DAV ++ + SR K L+ + V+VNW + V GD+
Sbjct: 166 PASDVEIRDDTVSSLRLDAVCASMSRQSRQKAQALVKNGLVKVNWKAIEDPSYQVAEGDM 225
Query: 250 VSVSGKGRLKIGEIN-ETKKGKFAVEIIR 167
+S+ G GR + +++ +TKK K+ V R
Sbjct: 226 LSIRGFGRCSLAKVDGKTKKDKWKVTFER 254
[129][TOP]
>UniRef100_B6FNE8 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM
1787 RepID=B6FNE8_9CLOT
Length = 264
Score = 85.5 bits (210), Expect = 3e-15
Identities = 53/151 (35%), Positives = 82/151 (54%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+L GI R K+GDIL+QE+ A + + L F+ L ++ + V Y
Sbjct: 116 GAVLNLGIERSKIGDILVQEDS-AILFVHQSLEQFIQDELKRIRHTSVMAEPENFEKFSY 174
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
P TV +SLR+D++ + F SR+KLV I + V VN +T NG +K D+
Sbjct: 175 TPQIEEKKGTV-SSLRLDSLLALAFSSSRTKLVPYIENGKVFVNGKLITSNGYQIKQDDI 233
Query: 250 VSVSGKGRLKIGE-INETKKGKFAVEIIRYL 161
+SV G GR + E +++TK+G++ V I Y+
Sbjct: 234 ISVRGLGRFQYKEMLSQTKRGRYLVTIHLYI 264
[130][TOP]
>UniRef100_Q064V0 RNA-binding S4 n=1 Tax=Synechococcus sp. BL107 RepID=Q064V0_9SYNE
Length = 261
Score = 84.7 bits (208), Expect = 5e-15
Identities = 48/148 (32%), Positives = 84/148 (56%), Gaps = 1/148 (0%)
Frame = -2
Query: 607 AILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYE 428
A+ G + +++GD+ ++ ++G Q L PE + +V +V + C + + AL
Sbjct: 113 ALQELGAAPDQIGDLWVRGDRGGQGLCTPESAAQLHEQCGRVRDVDIRCEALAIEALHLP 172
Query: 427 PPRT-NSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
RT +TVEAS RIDA+ASAGF +SR+K+V I + +R+NW V + + GD
Sbjct: 173 AQRTPRILQTVEASCRIDAIASAGFGLSRAKIVGHIKAGRLRMNWHDVRQASRELGVGDR 232
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIR 167
+ + +G L++ + TK+ ++ VE+ R
Sbjct: 233 LQLQDRGALEVLSLTRTKRERWRVELRR 260
[131][TOP]
>UniRef100_C5D8P0 RNA-binding S4 domain protein n=1 Tax=Geobacillus sp. WCH70
RepID=C5D8P0_GEOSW
Length = 257
Score = 84.3 bits (207), Expect = 7e-15
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 1/147 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA++ G+ R K GDIL++EE+ Q L E+ D++ L +G V+ K PL +
Sbjct: 108 GALMSLGLRRGKFGDILMKEER-VQFLAANEVADYIRLHLHAIGKANVSVEKRPLTEIIT 166
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ +SLR+DA+ S F +SR K+ I + V+VNW V + + GD+
Sbjct: 167 LEEKWQDTTITASSLRLDAILSQAFHVSRQKIQSFIENGFVKVNWKIVEQAHFECQQGDI 226
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEI 173
+S G GR KI I +TKK K+ + I
Sbjct: 227 LSARGFGRCKIISIEGKTKKEKWRIRI 253
[132][TOP]
>UniRef100_Q7V0B3 Putative uncharacterized protein n=1 Tax=Prochlorococcus marinus
subsp. pastoris str. CCMP1986 RepID=Q7V0B3_PROMP
Length = 263
Score = 84.0 bits (206), Expect = 9e-15
Identities = 47/147 (31%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Frame = -2
Query: 604 ILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYEP 425
++ G+ E++GDI ++GAQ +I ++F+ + + +V V + L L+
Sbjct: 116 LVDNGLREERIGDIWTIGDRGAQGIIDDSKIEFLDEKIFSLRDVKVKIKIVSLDELQIPA 175
Query: 424 PRTNSF-KTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDVV 248
R+ TVEAS RIDA+ASAGF+ISR+K+++ I + +++N TV K +K GD +
Sbjct: 176 GRSKKIINTVEASTRIDAIASAGFRISRNKILERIETGMLKLNGKTVKKGTISLKVGDKL 235
Query: 247 SVSGKGRLKIGEINETKKGKFAVEIIR 167
+ KG ++I ++ TK+ ++ ++++R
Sbjct: 236 QLDNKGFIEILDLEITKRERWKIKLLR 262
[133][TOP]
>UniRef100_C9A0Y3 S4 domain-containing protein n=1 Tax=Enterococcus gallinarum EG2
RepID=C9A0Y3_ENTGA
Length = 260
Score = 84.0 bits (206), Expect = 9e-15
Identities = 49/139 (35%), Positives = 74/139 (53%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G ++GTG+ RE GDI I + + QV + E+ FV T +DK+GNV V + L
Sbjct: 110 GTLMGTGVKREYFGDI-ISDGENWQVFVASEISHFVQTQVDKIGNVSVRLEETKYTELIV 168
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ + +SLR+D V SA + ISR + LI S V+VNW + ++ D+
Sbjct: 169 PKDGWSEERETVSSLRLDTVISAVYNISRQRSKQLIESGKVKVNWTETLRPDFMLDLLDI 228
Query: 250 VSVSGKGRLKIGEINETKK 194
VS+ G GR++I + T K
Sbjct: 229 VSIRGFGRIQIQGLEGTTK 247
[134][TOP]
>UniRef100_Q3AHP1 RNA-binding S4 n=1 Tax=Synechococcus sp. CC9605 RepID=Q3AHP1_SYNSC
Length = 258
Score = 83.2 bits (204), Expect = 2e-14
Identities = 44/148 (29%), Positives = 82/148 (55%), Gaps = 1/148 (0%)
Frame = -2
Query: 607 AILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYE 428
A+ G+ + +GD+ ++ ++G Q + P + L V V + C PL L+
Sbjct: 110 ALQTMGVDADNIGDLWVRGDRGGQGICTPSAAKALHGRLGAVREVEIRCESRPLEQLQQP 169
Query: 427 PPRT-NSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
R+ + +TVEAS R+DA+ASAGF +SR+K+V + + +R+NW V + + GD
Sbjct: 170 VQRSVRTLQTVEASCRLDAIASAGFGLSRAKIVTHVKAGRLRLNWGNVRQASRELVVGDR 229
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEIIR 167
+ + +G +++ + TK+ ++ VE+ R
Sbjct: 230 LQLQDRGSVEVLSLTRTKRERWRVELRR 257
[135][TOP]
>UniRef100_Q02WY5 Cell division protein, S4-like domain n=1 Tax=Lactococcus lactis
subsp. cremoris SK11 RepID=Q02WY5_LACLS
Length = 263
Score = 83.2 bits (204), Expect = 2e-14
Identities = 53/148 (35%), Positives = 82/148 (55%), Gaps = 2/148 (1%)
Frame = -2
Query: 610 GAILG-TGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALE 434
G LG G+ R++LGDI++ + K Q+ + LV+ ++DK+G V +I L L
Sbjct: 110 GTFLGQAGVKRQELGDIIVTDSK-IQIFVSKHLVESF-KSIDKIGRAAVKIDEISLTDLA 167
Query: 433 YEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGD 254
+ R + LRID + + FKISR+ +++ SK V++N+ + K V GD
Sbjct: 168 QDTERAIQEVVLLDGLRIDKMIAIAFKISRNIATNMLESKKVKINYQEIDKKDFSVGAGD 227
Query: 253 VVSVSGKGRLKI-GEINETKKGKFAVEI 173
++SV G GR+KI + TKKGK VEI
Sbjct: 228 LISVRGFGRIKILSLLGLTKKGKQRVEI 255
[136][TOP]
>UniRef100_Q9K9U8 BH2547 protein n=1 Tax=Bacillus halodurans RepID=Q9K9U8_BACHD
Length = 258
Score = 82.8 bits (203), Expect = 2e-14
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA + G+ REK GDIL+ +E+ Q+++ E+ +FV L VG V ++ +
Sbjct: 108 GACMSLGVKREKFGDILVADER-IQLVVATEIAEFVRLHLTSVGKAQVEMVELGFEQMLV 166
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ +SLR+DAV +SR+K +L+ V+VNW V ++ GD
Sbjct: 167 TTESWHERTATVSSLRLDAVIGEMLSLSRAKAAELVEKGRVKVNWKLVESGALTLQAGDH 226
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEIIR 167
+SV G GR K+ E+ +TKK KF + I R
Sbjct: 227 ISVRGFGRHKLLEVEGKTKKDKFRLRIGR 255
[137][TOP]
>UniRef100_Q1WTA6 RNA binding protein n=1 Tax=Lactobacillus salivarius UCC118
RepID=Q1WTA6_LACS1
Length = 262
Score = 82.4 bits (202), Expect = 3e-14
Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 5/151 (3%)
Frame = -2
Query: 610 GAILGT----GISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLL 443
G ILGT G+ RE +GDI+ Q + Q L E+ D+ +D+VG + V PL
Sbjct: 106 GQILGTLANSGLDREVIGDIIEQNDTW-QFLCEKEVSDYFRLQIDRVGKIKVRLEDAPLD 164
Query: 442 ALEYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVK 263
+ +SLRID++ S F ISR +LI ++ V++NW TV + VK
Sbjct: 165 EIVVPELNWQEKMVTSSSLRIDSLVSVTFNISRESSKNLIKAEKVQLNWMTVARPDYEVK 224
Query: 262 TGDVVSVSGKGRLKIGE-INETKKGKFAVEI 173
GD++S+ G GRL+I + + T+K K + +
Sbjct: 225 YGDILSIRGYGRLRIDDLLGVTRKDKLRIRV 255
[138][TOP]
>UniRef100_A9VU59 RNA-binding S4 domain protein n=1 Tax=Bacillus weihenstephanensis
KBAB4 RepID=A9VU59_BACWK
Length = 255
Score = 82.4 bits (202), Expect = 3e-14
Identities = 51/145 (35%), Positives = 79/145 (54%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA + G++REK GDIL+QE++ AQ+ + E+V ++ L +G + VT S I + +
Sbjct: 106 GAFMSLGLTREKCGDILLQEDR-AQIAVAKEVVSYIEMNLQSIGKMKVTLSPIQVEKILR 164
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ +SLR+D + + ISR K+ LI V+VNW TV + GDV
Sbjct: 165 VGEKWGEKSGTVSSLRLDVLLAEMLHISRQKVQPLIKGGLVKVNWKTVEQTSYECFPGDV 224
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + +TK+ K+ V
Sbjct: 225 FSVRGYGRSKLFSVEGKTKRDKWRV 249
[139][TOP]
>UniRef100_A2RMT7 Putative uncharacterized protein n=1 Tax=Lactococcus lactis subsp.
cremoris MG1363 RepID=A2RMT7_LACLM
Length = 239
Score = 82.4 bits (202), Expect = 3e-14
Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 2/148 (1%)
Frame = -2
Query: 610 GAILG-TGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALE 434
G LG G+ R++LGDI++ + K Q+ + LV+ ++DK+G V +I L L
Sbjct: 86 GTFLGQAGVKRQELGDIIVTDRK-IQIFVSKHLVESF-KSIDKIGRAAVKIDEISLTDLA 143
Query: 433 YEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGD 254
R + LRID + + FKISR+ +++ SK V++N+ + K V GD
Sbjct: 144 QNTERAIQEVVLLDGLRIDKMIAIAFKISRNIATNMLESKKVKINYQEIDKKDFSVGAGD 203
Query: 253 VVSVSGKGRLKI-GEINETKKGKFAVEI 173
++SV G GR+KI + TKKGK VEI
Sbjct: 204 LISVRGFGRIKILSLLGLTKKGKQRVEI 231
[140][TOP]
>UniRef100_C3A9T9 RNA-binding S4 domain protein n=1 Tax=Bacillus mycoides DSM 2048
RepID=C3A9T9_BACMY
Length = 241
Score = 82.4 bits (202), Expect = 3e-14
Identities = 51/145 (35%), Positives = 79/145 (54%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA + G++REK GDIL+QE++ AQ+ + E+V ++ L +G + VT S I + +
Sbjct: 92 GAFMSLGLTREKCGDILLQEDR-AQIAVAKEVVSYIEMNLQSIGKMKVTLSPIQVEKILR 150
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ +SLR+D + + ISR K+ LI V+VNW TV + GDV
Sbjct: 151 VGEKWGEKSGTVSSLRLDVLLAEMLHISRQKVQPLIKGGLVKVNWKTVEQTSYECFPGDV 210
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + +TK+ K+ V
Sbjct: 211 FSVRGYGRSKLFSVEGKTKRDKWRV 235
[141][TOP]
>UniRef100_C2SNY5 RNA-binding S4 domain protein n=2 Tax=Bacillus cereus
RepID=C2SNY5_BACCE
Length = 255
Score = 82.4 bits (202), Expect = 3e-14
Identities = 51/145 (35%), Positives = 79/145 (54%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA + G++REK GDIL+QE++ AQ+ + E+V ++ L +G + VT S I + +
Sbjct: 106 GAFMSLGLTREKCGDILLQEDR-AQIAVAKEVVSYIEMNLQSIGKMKVTLSPIQVEKILR 164
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ +SLR+D + + ISR K+ LI V+VNW TV + GDV
Sbjct: 165 VGEKWGEKSGTVSSLRLDVLLAEMLHISRQKVQPLIKGGLVKVNWKTVEQTSYECFPGDV 224
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + +TK+ K+ V
Sbjct: 225 FSVRGYGRSKLFSVEGKTKRDKWRV 249
[142][TOP]
>UniRef100_C2PZU7 RNA-binding S4 domain protein n=1 Tax=Bacillus cereus AH621
RepID=C2PZU7_BACCE
Length = 241
Score = 82.4 bits (202), Expect = 3e-14
Identities = 51/145 (35%), Positives = 79/145 (54%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA + G++REK GDIL+QE++ AQ+ + E+V ++ L +G + VT S I + +
Sbjct: 92 GAFMSLGLTREKCGDILLQEDR-AQIAVAKEVVSYIEMNLQSIGKMKVTLSPIQVEKILR 150
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ +SLR+D + + ISR K+ LI V+VNW TV + GDV
Sbjct: 151 VGEKWGEKSGTVSSLRLDVLLAEMLHISRQKVQPLIKGGLVKVNWKTVEQTSYECFPGDV 210
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + +TK+ K+ V
Sbjct: 211 FSVRGYGRSKLFSVEGKTKRDKWRV 235
[143][TOP]
>UniRef100_C2EFW4 Ribosomal protein S4e n=1 Tax=Lactobacillus salivarius ATCC 11741
RepID=C2EFW4_9LACO
Length = 262
Score = 82.4 bits (202), Expect = 3e-14
Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 5/151 (3%)
Frame = -2
Query: 610 GAILGT----GISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLL 443
G ILGT G+ RE +GDI+ Q + Q L E+ D+ +D+VG + V PL
Sbjct: 106 GQILGTLANSGLDREVIGDIIEQNDTW-QFLCEKEVSDYFRLQIDRVGKIKVRLEDAPLD 164
Query: 442 ALEYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVK 263
+ +SLRID++ S F ISR +LI ++ V++NW TV + VK
Sbjct: 165 EIVVPELNWQEKMVTSSSLRIDSLVSVTFNISRESSKNLIKAEKVQLNWMTVARPDYEVK 224
Query: 262 TGDVVSVSGKGRLKIGE-INETKKGKFAVEI 173
GD++S+ G GRL+I + + T+K K + +
Sbjct: 225 YGDILSIRGYGRLRIDDLLGVTRKDKLRIRV 255
[144][TOP]
>UniRef100_A5GV40 Putative uncharacterized protein SynRCC307_1846 n=1
Tax=Synechococcus sp. RCC307 RepID=A5GV40_SYNR3
Length = 261
Score = 81.6 bits (200), Expect = 4e-14
Identities = 43/136 (31%), Positives = 78/136 (57%)
Frame = -2
Query: 574 LGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYEPPRTNSFKTVE 395
LGD+L++ ++GA V++ + + + +V +V L + + S +VE
Sbjct: 124 LGDVLVRGDRGALVIVTSAMAERLQEQSLQVRSVDCQLQAGDWSRLPSQASSSKSLTSVE 183
Query: 394 ASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDVVSVSGKGRLKIG 215
ASLR+DA+ASAGF +SRSK+ I +RV+WA VT ++ G+ V + G+G L +
Sbjct: 184 ASLRLDAIASAGFGVSRSKMATWIRQGRIRVDWAVVTTPSRELQNGERVQLEGRGELVLD 243
Query: 214 EINETKKGKFAVEIIR 167
++ TK+ ++ +++ R
Sbjct: 244 RVDRTKRDRWRLQMTR 259
[145][TOP]
>UniRef100_A5KLK6 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC
27756 RepID=A5KLK6_9FIRM
Length = 266
Score = 81.6 bits (200), Expect = 4e-14
Identities = 53/151 (35%), Positives = 81/151 (53%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+IL GI R K GDILI E A + ++V F+ + L ++ + V ++P ++Y
Sbjct: 118 GSILNLGIDRSKTGDILI-ENNTAILFAHDDIVSFLCSELTRIRHTSVKTEELPSFDIQY 176
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
P TV AS+R+D++ S F SR+KL LI V VN +T NG GD+
Sbjct: 177 TPKYEELTGTV-ASVRLDSLLSLAFSSSRTKLSGLIEGGRVFVNGKLITSNGYQPNEGDL 235
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEIIRYL 161
+SV G+ + I N+T+K + V I +Y+
Sbjct: 236 ISVRKMGKFRFAGIGNKTRKHRIYVRIQKYI 266
[146][TOP]
>UniRef100_P71020 Putative RNA-binding protein ylmH n=1 Tax=Bacillus subtilis
RepID=YLMH_BACSU
Length = 257
Score = 81.6 bits (200), Expect = 4e-14
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 1/149 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA++G G+ R+K GDI+ E Q+++ + DFV L + G V+ KI L L
Sbjct: 108 GALMGIGLKRQKFGDIVFSET-AVQLIVSADTADFVAAQLTQAGKAAVSLEKIDLSDLNI 166
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+DAV ++ + SR K L+ + V+VNW V IV GD+
Sbjct: 167 PAVDVEIRDDTVSSLRLDAVCASMSRQSRQKSQTLVKNGLVKVNWKVVEDPSYIVAEGDM 226
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEIIR 167
+S+ G GR + +I +TKK K+ V R
Sbjct: 227 LSIRGFGRCSLTKIEGKTKKDKWRVTFER 255
[147][TOP]
>UniRef100_C9B0E9 S4 domain-containing protein n=2 Tax=Enterococcus casseliflavus
RepID=C9B0E9_ENTCA
Length = 260
Score = 80.9 bits (198), Expect = 8e-14
Identities = 49/139 (35%), Positives = 71/139 (51%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G ++GTG+ RE GDIL E QV + E+ F+ +DK+GNV V + L
Sbjct: 110 GTLMGTGVKREYFGDILSDGEIW-QVFVATEVSHFIQLQVDKIGNVSVRLEETKYTELIV 168
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ +SLR+D V SA + ISR + LI S V+VNW + ++ D+
Sbjct: 169 PKDGWTEERETVSSLRLDTVISAVYNISRQRSKQLIESGKVKVNWTEALRPDFVLDLLDI 228
Query: 250 VSVSGKGRLKIGEINETKK 194
VSV G GR++I + T K
Sbjct: 229 VSVRGFGRIQIQGLEGTTK 247
[148][TOP]
>UniRef100_C9ACG2 S4 domain-containing protein n=1 Tax=Enterococcus casseliflavus
EC20 RepID=C9ACG2_ENTCA
Length = 260
Score = 80.9 bits (198), Expect = 8e-14
Identities = 49/139 (35%), Positives = 71/139 (51%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G ++GTG+ RE GDIL E QV + E+ F+ +DK+GNV V + L
Sbjct: 110 GTLMGTGVKREYFGDILSDGEIW-QVFVAAEVSHFIQLQVDKIGNVSVRLEETKYTELIV 168
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ +SLR+D V SA + ISR + LI S V+VNW + ++ D+
Sbjct: 169 PKDGWTEERETVSSLRLDTVISAVYNISRQRSKQLIESGKVKVNWTEALRPDFVLDLLDI 228
Query: 250 VSVSGKGRLKIGEINETKK 194
VSV G GR++I + T K
Sbjct: 229 VSVRGFGRIQIQGLEGTTK 247
[149][TOP]
>UniRef100_B4AE80 RNA-binding protein n=1 Tax=Bacillus pumilus ATCC 7061
RepID=B4AE80_BACPU
Length = 258
Score = 80.9 bits (198), Expect = 8e-14
Identities = 51/145 (35%), Positives = 78/145 (53%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+++GTG+ R+K GD+L EE Q + ++ DFV L VG V+ +I L+
Sbjct: 109 GSLIGTGLKRQKFGDLLFSEED-VQFICTSDVADFVRAQLTHVGRASVSLEEITQADLKP 167
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+T+ + +SLR+DAV +A + SR K L+ + V+VNW + GD
Sbjct: 168 VKSKTDIKEDTISSLRLDAVCAAISRQSRQKAQLLVKNGLVKVNWKVTEDPSFTIGEGDQ 227
Query: 250 VSVSGKGRLKIGEIN-ETKKGKFAV 179
+SV G GR + I+ +TKK KF V
Sbjct: 228 LSVRGFGRFSLKTIDGKTKKDKFKV 252
[150][TOP]
>UniRef100_A7B2X7 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC
29149 RepID=A7B2X7_RUMGN
Length = 262
Score = 80.9 bits (198), Expect = 8e-14
Identities = 53/151 (35%), Positives = 80/151 (52%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G ILG GI R K+GDIL+ + A V + L F++ L +V + V +I +Y
Sbjct: 114 GTILGLGIERAKIGDILV-DGTDAVVFVHRTLQSFLMEELTRVRHTQVLVKEISREDFQY 172
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
E P+ + AS+R+D++ S F SR+KL LI V VN +T N +K DV
Sbjct: 173 E-PKYEEIRGTVASVRLDSLLSLAFSASRTKLSGLIEGAKVFVNGKLITTNSYQLKENDV 231
Query: 250 VSVSGKGRLKI-GEINETKKGKFAVEIIRYL 161
+SV G G+ + G +TKK + V + +Y+
Sbjct: 232 ISVRGYGKFRYNGTGAKTKKNRIYVSVYKYI 262
[151][TOP]
>UniRef100_UPI0001850E76 RNA-binding S4 domain-containing protein n=1 Tax=Bacillus
coahuilensis m4-4 RepID=UPI0001850E76
Length = 257
Score = 80.5 bits (197), Expect = 1e-13
Identities = 48/145 (33%), Positives = 81/145 (55%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA++ GI REK GDIL+ +++ Q++ EL ++ +VG + + +
Sbjct: 108 GALMSLGIRREKYGDILLSDDR-IQLIAANELKSYITLQFTEVGKSQIELIEKNRKEIIQ 166
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ ++T +SLR+D + S KISR+K I++ V+VNW + I + GD+
Sbjct: 167 PNEEWSEYQTTVSSLRLDVMLSTLLKISRNKAQAYITTNKVKVNWREEDRVSFICEPGDM 226
Query: 250 VSVSGKGRLKIGEIN-ETKKGKFAV 179
+SV GKGRLKI ++ +TK+ K+ V
Sbjct: 227 ISVRGKGRLKIFSLDGQTKREKWKV 251
[152][TOP]
>UniRef100_Q9CEH6 Putative uncharacterized protein ytdC n=1 Tax=Lactococcus lactis
subsp. lactis RepID=Q9CEH6_LACLA
Length = 263
Score = 80.5 bits (197), Expect = 1e-13
Identities = 53/148 (35%), Positives = 83/148 (56%), Gaps = 2/148 (1%)
Frame = -2
Query: 610 GAILG-TGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALE 434
G LG G+ R++LGDI++ + K QV + LV+ A++K+G + +I L L
Sbjct: 110 GTFLGQAGVKRQELGDIIVSDNK-IQVFVSKHLVESF-KAIEKIGRAAIKIQEISLENLV 167
Query: 433 YEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGD 254
E + + +LR+D + + FKISR+ +++ SK V+VN+ + K V D
Sbjct: 168 EETDKAVREVVLVDNLRVDKMIAVAFKISRNIATNMLESKKVKVNYLEIDKKDFSVGLDD 227
Query: 253 VVSVSGKGRLKIGEINE-TKKGKFAVEI 173
++SV G GR+KI I + TKKGK VEI
Sbjct: 228 LISVRGFGRIKILRILDFTKKGKQRVEI 255
[153][TOP]
>UniRef100_Q8E179 YlmH protein n=1 Tax=Streptococcus agalactiae serogroup V
RepID=Q8E179_STRA5
Length = 262
Score = 80.5 bits (197), Expect = 1e-13
Identities = 50/150 (33%), Positives = 83/150 (55%), Gaps = 6/150 (4%)
Frame = -2
Query: 604 ILGT-----GISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLA 440
I+GT G+ R LGDIL+ EE AQVL+ ++ + +V ++ K+G V +++PL
Sbjct: 108 IMGTLLNYLGVKRSILGDILV-EEGCAQVLVDSQMTNHLVHSVTKIGTASVQLAEVPLSK 166
Query: 439 LEYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKT 260
L + +SLR+D + + KISR++ LI + V+VN+ATV + +
Sbjct: 167 LLTPKQDIQKLTVIASSLRLDKILATILKISRTQSTKLIEADKVKVNYATVNRVSEQLVE 226
Query: 259 GDVVSVSGKGRLKIG-EINETKKGKFAVEI 173
GD++SV G GR + + TK K+ +E+
Sbjct: 227 GDLISVRGYGRFTLNHNLGLTKNQKYKLEV 256
[154][TOP]
>UniRef100_Q042Q5 Cell division protein, S4-like domain n=1 Tax=Lactobacillus gasseri
ATCC 33323 RepID=Q042Q5_LACGA
Length = 265
Score = 80.5 bits (197), Expect = 1e-13
Identities = 46/146 (31%), Positives = 75/146 (51%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + GI + GDI+ E Q + EL D+ + + +VG V +PL +
Sbjct: 112 GVLTHLGIELDTFGDIINDENGKWQFFVKTELKDYFIEQVTRVGRTKVKLHDLPLSKVLA 171
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ + + SLR+DAV SA +SRS++ +I+ +V++NW V ++ IV D+
Sbjct: 172 QEDDSKELSVITISLRLDAVVSAVTNLSRSQVKKIIADGEVKLNWHLVAQSNIIVSVQDM 231
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEI 173
S+ GR +I + TKKGK +EI
Sbjct: 232 FSIRHYGRYEIINLATTKKGKKRLEI 257
[155][TOP]
>UniRef100_Q4MGX8 S4 domain protein n=1 Tax=Bacillus cereus G9241 RepID=Q4MGX8_BACCE
Length = 255
Score = 80.5 bits (197), Expect = 1e-13
Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + G++REK GDIL+QE++ AQ+++ E+V ++ L +G V V+ S + +
Sbjct: 106 GTFMSLGLTREKCGDILLQEDR-AQIVVAKEVVSYIEMNLQSIGKVKVSLSPVQGEKILQ 164
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D + + ISR K+ LI + V+VNW TV + TGDV
Sbjct: 165 IQETWGEKSGTVSSLRLDVMLAEMLHISRQKVQPLIKNGLVKVNWKTVEQTSYECYTGDV 224
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + TK+ K+ +
Sbjct: 225 FSVRGYGRSKLFSVEGRTKRDKWRI 249
[156][TOP]
>UniRef100_Q3DTK4 YlmH protein n=1 Tax=Streptococcus agalactiae 18RS21
RepID=Q3DTK4_STRAG
Length = 179
Score = 80.5 bits (197), Expect = 1e-13
Identities = 50/150 (33%), Positives = 83/150 (55%), Gaps = 6/150 (4%)
Frame = -2
Query: 604 ILGT-----GISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLA 440
I+GT G+ R LGDIL+ EE AQVL+ ++ + +V ++ K+G V +++PL
Sbjct: 25 IMGTLLNYLGVKRSILGDILV-EEGCAQVLVDSQMTNHLVHSVTKIGTASVQLAEVPLSK 83
Query: 439 LEYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKT 260
L + +SLR+D + + KISR++ LI + V+VN+ATV + +
Sbjct: 84 LLTPKQDIQKLTVIASSLRLDKILATILKISRTQSTKLIEADKVKVNYATVNRVSEQLVE 143
Query: 259 GDVVSVSGKGRLKIG-EINETKKGKFAVEI 173
GD++SV G GR + + TK K+ +E+
Sbjct: 144 GDLISVRGYGRFTLNHNLGLTKNQKYKLEV 173
[157][TOP]
>UniRef100_Q3D2V4 YlmH protein n=2 Tax=Streptococcus agalactiae RepID=Q3D2V4_STRAG
Length = 262
Score = 80.5 bits (197), Expect = 1e-13
Identities = 50/150 (33%), Positives = 83/150 (55%), Gaps = 6/150 (4%)
Frame = -2
Query: 604 ILGT-----GISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLA 440
I+GT G+ R LGDIL+ EE AQVL+ ++ + +V ++ K+G V +++PL
Sbjct: 108 IMGTLLNYLGVKRSILGDILV-EEGCAQVLVDSQMTNHLVHSVTKIGTASVQLAEVPLSK 166
Query: 439 LEYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKT 260
L + +SLR+D + + KISR++ LI + V+VN+ATV + +
Sbjct: 167 LLTPKQDIQKLTVIASSLRLDKILATILKISRTQSTKLIEADKVKVNYATVNRVSEQLVE 226
Query: 259 GDVVSVSGKGRLKIG-EINETKKGKFAVEI 173
GD++SV G GR + + TK K+ +E+
Sbjct: 227 GDLISVRGYGRFTLNHNLGLTKNQKYKLEV 256
[158][TOP]
>UniRef100_B7AR14 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus
ATCC 43243 RepID=B7AR14_9BACE
Length = 251
Score = 80.5 bits (197), Expect = 1e-13
Identities = 55/157 (35%), Positives = 86/157 (54%), Gaps = 7/157 (4%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPL----- 446
GA++ GI R+ +GDI+I++ K A V ++V ++ +LDKV + V C +
Sbjct: 101 GALMNLGIERDVIGDIMIRD-KTAYVFATRKIVPYIADSLDKVKHTSVKCRILSTEEITA 159
Query: 445 -LALEYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTI 269
+++E E + V +S R+DAV S + +SRS+ +++ K V VN N +
Sbjct: 160 SVSVELERQ-----ELVISSERLDAVISKLYNMSRSQSIEMFRDKKVFVNGRQYENNSGV 214
Query: 268 VKTGDVVSVSGKGRLKI-GEINETKKGKFAVEIIRYL 161
VK GDVV+V G G+ G I ETKKG+ V RY+
Sbjct: 215 VKPGDVVAVRGFGKFVYEGIIYETKKGRICVAADRYV 251
[159][TOP]
>UniRef100_A8FD06 Putative uncharacterized protein ylmH n=1 Tax=Bacillus pumilus
SAFR-032 RepID=A8FD06_BACP2
Length = 258
Score = 80.1 bits (196), Expect = 1e-13
Identities = 51/145 (35%), Positives = 78/145 (53%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+++GTG+ R+K GD+L EE Q + ++ DFV L VG V+ +I L+
Sbjct: 109 GSLIGTGLKRQKFGDLLFSEED-VQFICTSDVADFVRAQLTHVGRASVSLEEITQADLKP 167
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+T+ + +SLR+DAV +A + SR K L+ + V+VNW + GD
Sbjct: 168 VISKTDIKEDTISSLRLDAVCAAISRQSRQKAQLLVKNGLVKVNWKVTEDPSFTIGEGDQ 227
Query: 250 VSVSGKGRLKIGEIN-ETKKGKFAV 179
+SV G GR + I+ +TKK KF V
Sbjct: 228 LSVRGFGRFSLKTIDGKTKKDKFKV 252
[160][TOP]
>UniRef100_A2BY63 Uncharacterized conserved protein, contains S4-like domain n=1
Tax=Prochlorococcus marinus str. MIT 9515
RepID=A2BY63_PROM5
Length = 263
Score = 80.1 bits (196), Expect = 1e-13
Identities = 47/143 (32%), Positives = 86/143 (60%), Gaps = 1/143 (0%)
Frame = -2
Query: 592 GISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYEPPRTN 413
G+ E++GDI ++GAQ +I ++ + + + +V V + L +L+ R+
Sbjct: 120 GLIEERIGDIWTTGDRGAQGIIDDSKIEDLNEKVFFLRDVKVKIQIVDLDSLQIPVGRSQ 179
Query: 412 SF-KTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDVVSVSG 236
TVEAS R+DA+ASAGF+ISR+K+++ I + +++N TV K +K GD V +
Sbjct: 180 KLINTVEASTRLDAIASAGFRISRTKILERIETGMLKLNGKTVKKGTISLKVGDKVQLDN 239
Query: 235 KGRLKIGEINETKKGKFAVEIIR 167
KG ++I ++ TK+ ++ +++IR
Sbjct: 240 KGFVEILDLEMTKRERWKIKLIR 262
[161][TOP]
>UniRef100_D0ABL4 RNA binding protein S4 n=1 Tax=Enterococcus faecium TC 6
RepID=D0ABL4_ENTFC
Length = 260
Score = 80.1 bits (196), Expect = 1e-13
Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G ++GTGI R GDI+ ++ QV I E+ FV T + K+G V V I +
Sbjct: 110 GTLVGTGIKRSYFGDIISDGDRW-QVFIANEVDHFVATQVTKIGKVAVRLEPIKYTEMIM 168
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ +S+R+D+V S + ISR + LI + V+VNW T+ +++ D+
Sbjct: 169 PKDSWTQERGTVSSMRLDSVISEIYNISRQRSKQLIEAGKVKVNWTENTRPDFVLELLDI 228
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
+SV G GR++I E+ +TKK K+ V
Sbjct: 229 ISVRGYGRVQIQELEGKTKKEKYRV 253
[162][TOP]
>UniRef100_A5Z689 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum
ATCC 27560 RepID=A5Z689_9FIRM
Length = 251
Score = 80.1 bits (196), Expect = 1e-13
Identities = 51/154 (33%), Positives = 84/154 (54%), Gaps = 4/154 (2%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAIL GI R K+GDI +++ + A V + ++ ++ L K+ + V C+ + A+
Sbjct: 103 GAILNLGIVRNKIGDIFLKDNQ-AYVYCIDDISGYIAENLKKIKHTIVKCTVKYMEAVNI 161
Query: 430 EPPRTNSFKTVE---ASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKT 260
P FK ++ +++R+D++ + F SRS ++ I S V VN VT NG K
Sbjct: 162 TP----EFKIIKGTISNIRLDSLIATAFGTSRSSIISFIESGKVFVNGKMVTSNGHQPKP 217
Query: 259 GDVVSVSGKGRLKI-GEINETKKGKFAVEIIRYL 161
D++SV GKGR G++ TKKG+ + I Y+
Sbjct: 218 DDIISVRGKGRFIFEGQLGVTKKGRNLISIKLYI 251
[163][TOP]
>UniRef100_B9DUU9 Putative uncharacterized protein n=1 Tax=Streptococcus uberis 0140J
RepID=B9DUU9_STRU0
Length = 263
Score = 79.7 bits (195), Expect = 2e-13
Identities = 51/156 (32%), Positives = 87/156 (55%), Gaps = 6/156 (3%)
Frame = -2
Query: 604 ILGT-----GISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLA 440
ILGT GI R +GDIL+ + AQ+++ + + + + + K+ V V +I L +
Sbjct: 109 ILGTLINELGIKRSMIGDILVHDGF-AQLMVNRQFLHYFLGNIQKIARVSVNLKEIDLNS 167
Query: 439 LEYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKT 260
L + +SLRID + ++ K+SRS+ + L+ S+ V+VN+ +TK+ +
Sbjct: 168 LLLVQKEESLIDITLSSLRIDRLIASVLKLSRSQAIKLVESEKVKVNYRIITKSSDSIAI 227
Query: 259 GDVVSVSGKGRLKIGEINE-TKKGKFAVEIIRYL*K 155
GD+VSV G GR K+ + N TK GK+ + + + L K
Sbjct: 228 GDLVSVRGFGRFKLLQDNGFTKNGKYKITLSKTLHK 263
[164][TOP]
>UniRef100_A4IM23 RNA binding protein n=2 Tax=Geobacillus RepID=A4IM23_GEOTN
Length = 257
Score = 79.7 bits (195), Expect = 2e-13
Identities = 53/150 (35%), Positives = 80/150 (53%), Gaps = 2/150 (1%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPL-LALE 434
GA++ G+ R K GDIL+Q + Q E+ D++ ++ +G VT +PL A+
Sbjct: 108 GALMSLGLRRGKFGDILVQGGE-IQFFAAAEVADYIRLHVETIGKARVTLEPLPLSAAMP 166
Query: 433 YEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGD 254
E TV +SLR+DAV + F+++R K L+ S V+VNW V K + GD
Sbjct: 167 IEETWQEGTVTV-SSLRLDAVLAQAFRLARDKARTLVESGLVKVNWRVVDKPDFVCGPGD 225
Query: 253 VVSVSGKGRLKIGEI-NETKKGKFAVEIIR 167
V+S G GR K+ + TKK ++ V I R
Sbjct: 226 VLSARGFGRCKLFSVEGPTKKERWLVRIGR 255
[165][TOP]
>UniRef100_C4VTQ4 Cell division protein n=1 Tax=Lactobacillus gasseri 202-4
RepID=C4VTQ4_9LACO
Length = 265
Score = 79.3 bits (194), Expect = 2e-13
Identities = 46/146 (31%), Positives = 75/146 (51%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + GI + GDI+ E Q + EL D+ + + +VG V +PL +
Sbjct: 112 GVLTHLGIELDTFGDIINDENGKWQFFVKTELKDYFIEQVTRVGRTKVKLHDLPLSKVLA 171
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ + + SLR+DAV SA +SRS++ +I+ +V++NW V ++ IV D+
Sbjct: 172 QEDDSKELIVITISLRLDAVVSAVTNLSRSQVKKIIADGEVKLNWHLVAQSNIIVSVQDM 231
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEI 173
S+ GR +I + TKKGK +EI
Sbjct: 232 FSIRHYGRYEIINLATTKKGKKRLEI 257
[166][TOP]
>UniRef100_C3BP00 RNA-binding S4 domain protein n=1 Tax=Bacillus pseudomycoides DSM
12442 RepID=C3BP00_9BACI
Length = 257
Score = 79.3 bits (194), Expect = 2e-13
Identities = 50/148 (33%), Positives = 83/148 (56%), Gaps = 4/148 (2%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIP---LLA 440
GA + G++REK GDIL+QE + AQ+++ E+V ++ L +G + V+ S + +L
Sbjct: 108 GAFMSLGLTREKCGDILLQENR-AQIIVAKEIVSYIEMNLQSIGKMTVSLSSVQADKVLR 166
Query: 439 LEYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKT 260
L+ E + +SLR+D + + +SR K+ LI + V+VNW TV +
Sbjct: 167 LQEEWKEQSG---TVSSLRLDVLLAEMLHLSRQKVQPLIKNGLVKVNWKTVEQTAYECFP 223
Query: 259 GDVVSVSGKGRLKIGEI-NETKKGKFAV 179
GDV S+ G GR K+ + +TK+ K+ V
Sbjct: 224 GDVFSIRGYGRSKLFSVEGKTKRDKWRV 251
[167][TOP]
>UniRef100_C3B6Y5 RNA-binding S4 domain protein n=1 Tax=Bacillus mycoides Rock3-17
RepID=C3B6Y5_BACMY
Length = 257
Score = 79.3 bits (194), Expect = 2e-13
Identities = 50/148 (33%), Positives = 83/148 (56%), Gaps = 4/148 (2%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIP---LLA 440
GA + G++REK GDIL+QE + AQ+++ E+V ++ L +G + V+ S + +L
Sbjct: 108 GAFMSLGLTREKCGDILLQENR-AQIIVAKEIVSYIEMNLQSIGKMTVSLSSVQADKVLR 166
Query: 439 LEYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKT 260
L+ E + +SLR+D + + +SR K+ LI + V+VNW TV +
Sbjct: 167 LQEEWKEQSG---TVSSLRLDVLLAEMLHLSRQKVQPLIKNGLVKVNWKTVEQTAYECFP 223
Query: 259 GDVVSVSGKGRLKIGEI-NETKKGKFAV 179
GDV S+ G GR K+ + +TK+ K+ V
Sbjct: 224 GDVFSIRGYGRSKLFSVEGKTKRDKWRV 251
[168][TOP]
>UniRef100_C3APK1 RNA-binding S4 domain protein n=1 Tax=Bacillus mycoides Rock1-4
RepID=C3APK1_BACMY
Length = 246
Score = 79.3 bits (194), Expect = 2e-13
Identities = 50/148 (33%), Positives = 83/148 (56%), Gaps = 4/148 (2%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIP---LLA 440
GA + G++REK GDIL+QE + AQ+++ E+V ++ L +G + V+ S + +L
Sbjct: 97 GAFMSLGLTREKCGDILLQENR-AQIIVAKEIVSYIEMNLQSIGKMTVSLSSVQADKVLR 155
Query: 439 LEYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKT 260
L+ E + +SLR+D + + +SR K+ LI + V+VNW TV +
Sbjct: 156 LQEEWKEQSG---TVSSLRLDVLLAEMLHLSRQKVQPLIKNGLVKVNWKTVEQTAYECFP 212
Query: 259 GDVVSVSGKGRLKIGEI-NETKKGKFAV 179
GDV S+ G GR K+ + +TK+ K+ V
Sbjct: 213 GDVFSIRGYGRSKLFSVEGKTKRDKWRV 240
[169][TOP]
>UniRef100_C0XAY6 Ribosomal protein S4e n=1 Tax=Lactobacillus gasseri JV-V03
RepID=C0XAY6_9LACO
Length = 265
Score = 79.3 bits (194), Expect = 2e-13
Identities = 45/146 (30%), Positives = 75/146 (51%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + GI + GDI+ E Q + EL ++ + + +VG V + PL +
Sbjct: 112 GVLTHLGIKLDTFGDIINDENGTWQFFVKTELKNYFLEQVTRVGRTKVKLHEFPLSKVLV 171
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ + + SLR+DAV SA +SRS++ +I +V++NW V ++ IV D+
Sbjct: 172 QEDDSKELSVITISLRLDAVVSAVTNLSRSQVKKMIEDGEVKLNWHLVAQSNIIVSVQDM 231
Query: 250 VSVSGKGRLKIGEINETKKGKFAVEI 173
+S+ GR +I + TKKGK +EI
Sbjct: 232 LSIRHYGRYEIINLTTTKKGKKRLEI 257
[170][TOP]
>UniRef100_Q03EY7 Cell division protein, S4-like domain n=1 Tax=Pediococcus
pentosaceus ATCC 25745 RepID=Q03EY7_PEDPA
Length = 261
Score = 79.0 bits (193), Expect = 3e-13
Identities = 51/157 (32%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G ++ GI R GDI+ Q E+ Q + EL +F + +D++G + K+ L+
Sbjct: 110 GTLVNAGIKRSTFGDIVHQAERW-QFAVNGELENFFLNEIDRIGKI-----KVKLI---- 159
Query: 430 EPPRTNSFKTVE----------ASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTK 281
P TN V+ ASLR+D++ S GF ISR ++ +LI + V++NW K
Sbjct: 160 -PTSTNDILKVQDDWEPVNQTVASLRMDSIISTGFSISRHRVKELIEKRLVQLNWMIDEK 218
Query: 280 NGTIVKTGDVVSVSGKGRLKIGEI-NETKKGKFAVEI 173
T++ DV+SV GR+K+ +I +TKK K +++
Sbjct: 219 ADTLIALNDVISVRKYGRIKLVDILGKTKKDKLKIQL 255
[171][TOP]
>UniRef100_Q039R1 Cell division protein, S4-like domain n=1 Tax=Lactobacillus casei
ATCC 334 RepID=Q039R1_LACC3
Length = 259
Score = 79.0 bits (193), Expect = 3e-13
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G +L G+ R+ GDI+ + Q + + D+V + +DK+G VGV ++ PL +Y
Sbjct: 109 GTLLNAGLDRDVFGDIITDGDIW-QFFVAAHMQDWVTSNVDKIGRVGVHFTEHPLA--DY 165
Query: 430 EPPRTNSFKTVEAS---LRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKT 260
P N ++ + S LR+D V + GF ISR + LI VR+N+ + T
Sbjct: 166 VTPE-NDWEPLNFSVSALRLDTVVAHGFNISRQRAKTLIQGGKVRLNFGESDAPDAEIAT 224
Query: 259 GDVVSVSGKGRLKIGEI-NETKKGKFAV 179
D++SV G GRL++ EI E+KKGK V
Sbjct: 225 SDIISVRGFGRLRLDEILGESKKGKLRV 252
[172][TOP]
>UniRef100_B3WDY8 YlmH (RNA-binding protein) n=1 Tax=Lactobacillus casei BL23
RepID=B3WDY8_LACCB
Length = 259
Score = 79.0 bits (193), Expect = 3e-13
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G +L G+ R+ GDI+ + Q + + D+V + +DK+G VGV ++ PL +Y
Sbjct: 109 GTLLNAGLDRDVFGDIITDGDIW-QFFVAAHMQDWVTSNVDKIGRVGVHFTEHPLA--DY 165
Query: 430 EPPRTNSFKTVEAS---LRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKT 260
P N ++ + S LR+D V + GF ISR + LI VR+N+ + T
Sbjct: 166 VTPE-NDWEPLNFSVSALRLDTVVAHGFNISRQRAKTLIQGGKVRLNFGESDAPDAEIAT 224
Query: 259 GDVVSVSGKGRLKIGEI-NETKKGKFAV 179
D++SV G GRL++ EI E+KKGK V
Sbjct: 225 SDIISVRGFGRLRLDEILGESKKGKLRV 252
[173][TOP]
>UniRef100_C8NFH5 S4 domain-containing protein YlmH n=1 Tax=Granulicatella adiacens
ATCC 49175 RepID=C8NFH5_9LACT
Length = 263
Score = 79.0 bits (193), Expect = 3e-13
Identities = 44/147 (29%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+++ G R +GDI+ E Q+ + +++ L+K+G V V ++ L
Sbjct: 110 GSLMSLGFDRSLIGDIISNGEDW-QLFCAQNMKEYIKQQLEKIGKVAVRLEEVDYTKLIV 168
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ +TV +SLR+D V ++ F +SR + ++I S V+VNW + +++ D+
Sbjct: 169 PVDHWTNIQTVVSSLRLDTVIASVFNVSRQRSKEMIESGKVKVNWTEENRPDFLLEILDI 228
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEI 173
VS+ G GRL+I +I TKK K +E+
Sbjct: 229 VSIRGYGRLQIQKIEGRTKKDKIKIEL 255
[174][TOP]
>UniRef100_C5F2T9 Putative uncharacterized protein n=1 Tax=Lactobacillus paracasei
subsp. paracasei 8700:2 RepID=C5F2T9_LACPA
Length = 259
Score = 79.0 bits (193), Expect = 3e-13
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G +L G+ R+ GDI+ + Q + + D+V + +DK+G VGV ++ PL +Y
Sbjct: 109 GTLLNAGLDRDVFGDIITDGDIW-QFFVAAHMQDWVTSNVDKIGRVGVHFTEHPLA--DY 165
Query: 430 EPPRTNSFKTVEAS---LRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKT 260
P N ++ + S LR+D V + GF ISR + LI VR+N+ + T
Sbjct: 166 VTPE-NDWEPLNFSVSALRLDTVVAHGFNISRQRAKTLIQGGKVRLNFGESDAPDAEIAT 224
Query: 259 GDVVSVSGKGRLKIGEI-NETKKGKFAV 179
D++SV G GRL++ EI E+KKGK V
Sbjct: 225 SDIISVRGFGRLRLDEILGESKKGKLRV 252
[175][TOP]
>UniRef100_B1SD65 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius
subsp. infantarius ATCC BAA-102 RepID=B1SD65_9STRE
Length = 261
Score = 79.0 bits (193), Expect = 3e-13
Identities = 49/156 (31%), Positives = 88/156 (56%), Gaps = 6/156 (3%)
Frame = -2
Query: 604 ILGT-----GISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLA 440
I+GT G+ R +GDIL+ E+ AQ+L+ +VD+ + K+ V+ +I L
Sbjct: 107 IMGTLLHKLGVKRTIIGDILV-EQGYAQLLVTKSMVDYFRVNVTKIAKASVSLKEISLDQ 165
Query: 439 LEYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKT 260
L ++ + +S+R+D V + K+SRS+ + LIS++ V+VN+ T+ + +++
Sbjct: 166 LIKGEKESHQLDIMVSSMRLDKVLATVLKLSRSQAIQLISAEKVKVNYQTLDRPSEMLQF 225
Query: 259 GDVVSVSGKGRLKI-GEINETKKGKFAVEIIRYL*K 155
GD++SV G GR I E TK GK+ + + + + K
Sbjct: 226 GDLISVRGFGRFSILSENGLTKNGKYKLTVDKMIHK 261
[176][TOP]
>UniRef100_A7GRM2 RNA-binding S4 domain protein n=1 Tax=Bacillus cytotoxicus NVH
391-98 RepID=A7GRM2_BACCN
Length = 257
Score = 78.6 bits (192), Expect = 4e-13
Identities = 50/146 (34%), Positives = 79/146 (54%), Gaps = 2/146 (1%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLL-ALE 434
GA++ G+ REK GDI IQE + Q+++ E+V ++ L +G V+ + L+
Sbjct: 108 GALMSLGLKREKYGDIFIQENR-VQIVVAKEVVSYIEMNLQSIGKTKVSLFSVSAENVLQ 166
Query: 433 YEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGD 254
+ F TV +SLR+D V + +SR K+ LI + V+VNW V + GD
Sbjct: 167 LQDEWREQFGTV-SSLRLDVVLAEILHLSRQKVQPLIKNGLVKVNWKVVDQTSYECLPGD 225
Query: 253 VVSVSGKGRLKIGEIN-ETKKGKFAV 179
++SV G GR K+ ++ TKK K+ V
Sbjct: 226 ILSVRGHGRSKLFSVDGRTKKDKWRV 251
[177][TOP]
>UniRef100_C2QG31 RNA-binding S4 domain protein n=1 Tax=Bacillus cereus R309803
RepID=C2QG31_BACCE
Length = 241
Score = 78.6 bits (192), Expect = 4e-13
Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + G++REK GDIL+QE + AQ+++ E+V ++ L +G V V+ S I +
Sbjct: 92 GTFMSLGLTREKCGDILLQENR-AQIIVAKEIVSYIEMNLQSIGKVKVSLSSIQGEQILQ 150
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D + + +SR K+ LI + V+VNW TV + GDV
Sbjct: 151 MHETWGEKSGTVSSLRLDVMLAEMLHVSRQKVQPLIRNGLVKVNWKTVEQTSYECYPGDV 210
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + +TK+ K+ +
Sbjct: 211 FSVRGYGRSKLFSVEGKTKRDKWRI 235
[178][TOP]
>UniRef100_C2HNQ8 Ribosomal protein S4e n=2 Tax=Lactobacillus acidophilus
RepID=C2HNQ8_LACAC
Length = 266
Score = 78.6 bits (192), Expect = 4e-13
Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 2/146 (1%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + +GI+ + GDI+ + Q EL DF +D++G V P+
Sbjct: 112 GTLANSGINTDAFGDIITDDNGTWQFFAKKELTDFFEEQVDRIGRTQVKLK--PISFKNV 169
Query: 430 EPPRTNSFKTVE--ASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTG 257
P +S + E AS+R+DAV S K SR ++ +I SK V++NW +T + +VK
Sbjct: 170 IVPEDDSIEKTEIIASMRVDAVLSGISKQSRGQIQKMIDSKLVKLNWHDITGSNIMVKED 229
Query: 256 DVVSVSGKGRLKIGEINETKKGKFAV 179
DV+S+ GR+ I ++ T+KGK+ V
Sbjct: 230 DVLSLRHFGRVLIENVSATRKGKYKV 255
[179][TOP]
>UniRef100_Q5L0W1 Hypothetical conserved protein n=1 Tax=Geobacillus kaustophilus
RepID=Q5L0W1_GEOKA
Length = 257
Score = 78.2 bits (191), Expect = 5e-13
Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA++ G+ R + GDILI++ + Q + E+ D+V ++ +G V +PL A
Sbjct: 108 GALMSLGLRRGEFGDILIRDGE-IQFFVAAEVADYVRLHVETIGKAPVALEPLPLSAAMP 166
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+DAV + F+++R K L+ S V+VNW V K + GDV
Sbjct: 167 LAETWEEGTVTVSSLRLDAVLAQAFRLAREKARALVESGLVKVNWKVVDKPDFLCGPGDV 226
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEIIR 167
+S G GR K+ + TKK ++ V+I R
Sbjct: 227 LSARGFGRCKLFSVEGPTKKERWLVQIGR 255
[180][TOP]
>UniRef100_Q3D9H5 YlmH protein n=3 Tax=Streptococcus agalactiae RepID=Q3D9H5_STRAG
Length = 262
Score = 78.2 bits (191), Expect = 5e-13
Identities = 49/150 (32%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
Frame = -2
Query: 604 ILGT-----GISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLA 440
I+GT G+ R LGDIL+ EE AQVL+ ++ + +V ++ K+G V +++PL
Sbjct: 108 IMGTLLNYLGVKRSILGDILV-EEGCAQVLVDSQMTNHLVHSVTKIGTASVQLAEVPLSK 166
Query: 439 LEYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKT 260
L + +SLR+D + + KISR++ LI + V+VN+A V + +
Sbjct: 167 LLTPKQDIQKLTVIASSLRLDKILATILKISRTQSTKLIEADKVKVNYAIVNRVSEQLVE 226
Query: 259 GDVVSVSGKGRLKIG-EINETKKGKFAVEI 173
GD++SV G GR + + TK K+ +E+
Sbjct: 227 GDLISVRGYGRFTLNHNLGLTKNQKYKLEV 256
[181][TOP]
>UniRef100_C9B795 RNA binding protein S4 n=7 Tax=Enterococcus faecium
RepID=C9B795_ENTFC
Length = 260
Score = 78.2 bits (191), Expect = 5e-13
Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G ++GTGI R GDI+ ++ QV I E+ FV + K+G V V I +
Sbjct: 110 GTLVGTGIKRSYFGDIISDGDRW-QVFIANEVDHFVAAQVTKIGKVAVRLEPIKYTEMIM 168
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ +S+R+D+V S + ISR + LI + V+VNW T+ +++ D+
Sbjct: 169 PKDSWTQERGTVSSMRLDSVISEIYNISRQRSKQLIEAGKVKVNWTENTRPDFVLELLDI 228
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
+SV G GR++I E+ +TKK K+ V
Sbjct: 229 ISVRGYGRVQIQELEGKTKKEKYRV 253
[182][TOP]
>UniRef100_C9AQ26 RNA binding protein S4 n=1 Tax=Enterococcus faecium Com15
RepID=C9AQ26_ENTFC
Length = 260
Score = 78.2 bits (191), Expect = 5e-13
Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G ++GTGI R GDI+ ++ QV I E+ FV + K+G V V I +
Sbjct: 110 GTLVGTGIKRSYFGDIISDGDRW-QVFIANEVDHFVAAQVTKIGKVAVRLEPIKYTEMIL 168
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ +S+R+D+V S + ISR + LI + V+VNW T+ +++ D+
Sbjct: 169 PKDSWTQERGTVSSMRLDSVISEIYNISRQRSKQLIEAGKVKVNWTENTRPDFVLELLDI 228
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
+SV G GR++I E+ +TKK K+ V
Sbjct: 229 ISVRGYGRVQIQELEGKTKKEKYRV 253
[183][TOP]
>UniRef100_C7TC41 Cell division protein n=1 Tax=Lactobacillus rhamnosus GG
RepID=C7TC41_LACRG
Length = 259
Score = 78.2 bits (191), Expect = 5e-13
Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G +L G+ R+ GDI + + + Q + + D+V++ + K+G VGV + PL A
Sbjct: 109 GTLLNAGLDRDVFGDI-VTDGRTWQFFVAAHMEDWVMSNITKIGRVGVHFTDYPLAAAVT 167
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
S ++LR+DA+ + GF +SR + LI + VR+N+ V T D+
Sbjct: 168 PENDWESISFSVSALRLDAIVAHGFNMSRQRAKMLIQAGKVRLNFGENDAPDAEVATSDI 227
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
+SV G GRL++ I E+KKGK V
Sbjct: 228 ISVRGFGRLRLDAILGESKKGKLRV 252
[184][TOP]
>UniRef100_C9RZK8 RNA-binding S4 domain protein n=2 Tax=Geobacillus
RepID=C9RZK8_9BACI
Length = 257
Score = 78.2 bits (191), Expect = 5e-13
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 1/149 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA++ G+ R K GDIL+ + + Q + E+ D+V ++ +G V +PL A
Sbjct: 108 GALMSLGLRRGKFGDILVLDGE-IQFFVAAEVADYVRLHVETIGKAPVALEPLPLSAAMP 166
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+DAV + F+++R K L+ S V+VNW V K + GDV
Sbjct: 167 LAETWEEGTVTVSSLRLDAVLAQAFRLAREKARALVESGLVKVNWKVVDKPDFLCGPGDV 226
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEIIR 167
+S G GR K+ + TKK ++ V+I R
Sbjct: 227 LSARGFGRCKLFSVEGPTKKERWLVQIGR 255
[185][TOP]
>UniRef100_C3F609 RNA-binding S4 domain protein n=2 Tax=Bacillus thuringiensis
RepID=C3F609_BACTU
Length = 241
Score = 78.2 bits (191), Expect = 5e-13
Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + G++REK GDIL+QE++ AQ+++ E+V ++ L +G V V+ S + +
Sbjct: 92 GTFMSLGLTREKCGDILLQEDR-AQIVVAKEVVSYIEMNLQSIGKVKVSLSPVQGEKILQ 150
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D + + ISR K+ LI + V+VNW TV + GDV
Sbjct: 151 IQETWGEKSGTVSSLRLDVMLAEMLHISRQKVQPLIKNGLVKVNWKTVEQTSYECYPGDV 210
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + TK+ K+ +
Sbjct: 211 FSVRGYGRSKLFSVEGRTKRDKWRI 235
[186][TOP]
>UniRef100_C3C6M1 RNA-binding S4 domain protein n=1 Tax=Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1 RepID=C3C6M1_BACTU
Length = 241
Score = 78.2 bits (191), Expect = 5e-13
Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + G++REK GDIL+QE++ AQ+++ E+V ++ L +G V V+ S + +
Sbjct: 92 GTFMSLGLTREKCGDILLQEDR-AQIVVAKEVVSYIEMNLQSIGKVKVSLSPVQGEKILQ 150
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D + + ISR K+ LI + V+VNW TV + GDV
Sbjct: 151 IQETWGEKSGTVSSLRLDVMLAEMLHISRQKVQPLIKNGLVKVNWKTVEQTSYECYPGDV 210
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + TK+ K+ +
Sbjct: 211 FSVRGYGRSKLFSVEGRTKRDKWRI 235
[187][TOP]
>UniRef100_C2QX69 RNA-binding S4 domain protein n=1 Tax=Bacillus cereus ATCC 4342
RepID=C2QX69_BACCE
Length = 241
Score = 78.2 bits (191), Expect = 5e-13
Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + G++REK GDIL+QE++ AQ+++ E+V ++ L +G V V+ S + +
Sbjct: 92 GTFMSLGLTREKCGDILLQEDR-AQIVVAKEVVSYIEMNLQSIGKVKVSLSPVQGEKILQ 150
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D + + ISR K+ LI + V+VNW TV + GDV
Sbjct: 151 IQETWGEKSGTVSSLRLDVMLAEMLHISRQKVQPLIKNGLVKVNWKTVEQTSYECYPGDV 210
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + TK+ K+ +
Sbjct: 211 FSVRGYGRSKLFSVEGRTKRDKWRI 235
[188][TOP]
>UniRef100_C2H875 Ribosomal protein S4e n=3 Tax=Enterococcus faecium
RepID=C2H875_ENTFC
Length = 260
Score = 78.2 bits (191), Expect = 5e-13
Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G ++GTGI R GDI+ ++ QV I E+ FV + K+G V V I +
Sbjct: 110 GTLVGTGIKRSYFGDIISDGDRW-QVFIANEVDHFVAAQVTKIGKVAVRLEPIKYTEMIL 168
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ +S+R+D+V S + ISR + LI + V+VNW T+ +++ D+
Sbjct: 169 PKDSWTQERGTVSSMRLDSVISEIYNISRQRSKQLIEAGKVKVNWTENTRPDFVLELLDI 228
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
+SV G GR++I E+ +TKK K+ V
Sbjct: 229 ISVRGYGRVQIQELEGKTKKEKYRV 253
[189][TOP]
>UniRef100_C1P6Y2 RNA-binding S4 domain protein n=1 Tax=Bacillus coagulans 36D1
RepID=C1P6Y2_BACCO
Length = 258
Score = 78.2 bits (191), Expect = 5e-13
Identities = 51/143 (35%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+++ G+ REK GDILI E + Q + EL DF+ ++G VT +K+ L
Sbjct: 109 GSLMALGLKREKFGDILIGEGR-IQFFVAAELSDFIQMEFRQIGKTPVTLTKMQLGEAIG 167
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ R + +SLR+DA+ SA + ISR K LI V+VNW TV + GD
Sbjct: 168 QQQRWLEKQATVSSLRLDAILSAVYNISRQKTRALIEHGLVKVNWKTVEDPAFQCEEGDT 227
Query: 250 VSVSGKGRLKIGEI-NETKKGKF 185
S G GR ++ + +TKK K+
Sbjct: 228 FSARGYGRSRLIRVEGKTKKEKW 250
[190][TOP]
>UniRef100_B7JJY4 S4 domain protein n=2 Tax=Bacillus cereus RepID=B7JJY4_BACC0
Length = 255
Score = 78.2 bits (191), Expect = 5e-13
Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + G++REK GDIL+QE++ AQ+++ E+V ++ L +G V V+ S + +
Sbjct: 106 GTFMSLGLTREKCGDILLQEDR-AQIVVAKEVVSYIEMNLQSIGKVKVSLSPVQGEKILQ 164
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D + + ISR K+ LI + V+VNW TV + GDV
Sbjct: 165 IQETWGEKSGTVSSLRLDVMLAEMLHISRQKVQPLIKNGLVKVNWKTVEQTSYECYPGDV 224
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + TK+ K+ +
Sbjct: 225 FSVRGYGRSKLFSVEGRTKRDKWRI 249
[191][TOP]
>UniRef100_C6QMD3 RNA-binding S4 domain protein n=1 Tax=Geobacillus sp. Y4.1MC1
RepID=C6QMD3_9BACI
Length = 257
Score = 77.8 bits (190), Expect = 6e-13
Identities = 52/148 (35%), Positives = 83/148 (56%), Gaps = 2/148 (1%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLL-ALE 434
GA++ G+ R K GDIL+++E+ Q L E+ D++ L +G V+ K PL ++
Sbjct: 108 GALMSLGLRRGKFGDILMKDEQ-IQFLAANEVADYIRLHLHAIGKANVSVEKKPLTDIIK 166
Query: 433 YEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGD 254
E ++ TV +SLR+DA+ S F SR K+ I + V+VNW V + + GD
Sbjct: 167 LEENWQDAMITV-SSLRLDAILSQAFHTSRQKIQSCIENGLVKVNWKIVDQAHFECRQGD 225
Query: 253 VVSVSGKGRLKIGEIN-ETKKGKFAVEI 173
V+S G GR KI ++ +TKK ++ + I
Sbjct: 226 VLSARGFGRCKIIAMDGKTKKDRWRIRI 253
[192][TOP]
>UniRef100_Q1GAS9 Putative RNA binding protein n=1 Tax=Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842 RepID=Q1GAS9_LACDA
Length = 265
Score = 77.4 bits (189), Expect = 8e-13
Identities = 42/145 (28%), Positives = 77/145 (53%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G++ +G+ + GDI+ + Q EL F + +D++G V V + PL
Sbjct: 112 GSLANSGVKTDTFGDIITDGQGRWQFFAEKELAGFFASQIDRMGPVKVRLEEKPLKDSLE 171
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ V +S+R+DAV +A SRS++ + + + +VR+NW K +++K GD+
Sbjct: 172 AEDNSEIISAVASSMRLDAVLAALSNKSRSQVKEALEAGEVRLNWHEEEKGESLLKVGDI 231
Query: 250 VSVSGKGRLKIGEINETKKGKFAVE 176
+S+ GR+K+ + +KKG+ VE
Sbjct: 232 LSLRRFGRVKLLSVQPSKKGRLRVE 256
[193][TOP]
>UniRef100_Q04B66 Cell division protein, S4-like domain n=1 Tax=Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365
RepID=Q04B66_LACDB
Length = 265
Score = 77.4 bits (189), Expect = 8e-13
Identities = 42/145 (28%), Positives = 77/145 (53%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G++ +G+ + GDI+ + Q EL F + +D++G V V + PL
Sbjct: 112 GSLANSGVKTDTFGDIITDGQGRWQFFAEKELAGFFASQIDRMGPVKVRLEEKPLKDRLE 171
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ V +S+R+DAV +A SRS++ + + + +VR+NW K +++K GD+
Sbjct: 172 AEDNSEIISAVASSMRLDAVLAALSNKSRSQVKEALEAGEVRLNWHEEEKGESLLKVGDI 231
Query: 250 VSVSGKGRLKIGEINETKKGKFAVE 176
+S+ GR+K+ + +KKG+ VE
Sbjct: 232 LSLRRFGRVKLLSVQPSKKGRLRVE 256
[194][TOP]
>UniRef100_Q03QI1 Cell division protein, S4-like domain n=1 Tax=Lactobacillus brevis
ATCC 367 RepID=Q03QI1_LACBA
Length = 259
Score = 77.4 bits (189), Expect = 8e-13
Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 1/147 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G +LG GI RE LGDIL QV+ + D++ +D++G V L +
Sbjct: 109 GTLLGAGIEREILGDILTDGTTW-QVVTEAGMADYLTGQVDRIGRVKARLQLADFADLVH 167
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ +SLR+D + GF +SR + +LI + VR+NWA K + D+
Sbjct: 168 PLSEWTAEGATLSSLRLDNIVGTGFHLSRHRAKELIEAGHVRLNWAETQKPDYELDVADI 227
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEI 173
VSV G GR+++ E+ TKK K V +
Sbjct: 228 VSVRGFGRIRLDEVGGRTKKDKIRVTL 254
[195][TOP]
>UniRef100_Q3DF04 YlmH protein n=1 Tax=Streptococcus agalactiae CJB111
RepID=Q3DF04_STRAG
Length = 262
Score = 77.4 bits (189), Expect = 8e-13
Identities = 48/150 (32%), Positives = 81/150 (54%), Gaps = 6/150 (4%)
Frame = -2
Query: 604 ILGT-----GISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLA 440
I+GT G+ R LGDIL+ EE AQVL+ ++ + ++ ++ K+G V +++PL
Sbjct: 108 IMGTLLNYLGVKRSILGDILV-EEGYAQVLVDSQMTNHLIHSVTKIGTASVQLAEVPLSK 166
Query: 439 LEYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKT 260
L + +SLR+D + + KISR + LI + V+VN+A V + +
Sbjct: 167 LLTPKQDIQKLTVIASSLRLDKILATILKISRKQSTKLIEADKVKVNYAIVNRVSEQLVE 226
Query: 259 GDVVSVSGKGRLKIG-EINETKKGKFAVEI 173
GD++SV G GR + + TK K+ +E+
Sbjct: 227 GDLISVRGYGRFTLSHNLGLTKNQKYKLEV 256
[196][TOP]
>UniRef100_C2ZBU0 RNA-binding S4 domain protein n=2 Tax=Bacillus cereus
RepID=C2ZBU0_BACCE
Length = 241
Score = 77.4 bits (189), Expect = 8e-13
Identities = 47/145 (32%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA + G++REK GDIL+QE + AQ+ + E+ ++ L +G V V+ + + +
Sbjct: 92 GAFMSLGLTREKCGDILLQENR-AQIAVAKEVASYIEMNLQSIGKVKVSLTPVQAEQILR 150
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ +SLR+D + + ISR K+ LI V+VNW TV + GDV
Sbjct: 151 VGEKWGEKSGTVSSLRLDVLLAEMLHISRQKVQPLIKGGLVKVNWKTVEQTAYECFPGDV 210
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
S+ G GR KI + +TK+ K+ +
Sbjct: 211 FSIRGYGRSKIFSVEGKTKRDKWRI 235
[197][TOP]
>UniRef100_C2WB32 RNA-binding S4 domain protein n=1 Tax=Bacillus cereus Rock3-44
RepID=C2WB32_BACCE
Length = 257
Score = 77.4 bits (189), Expect = 8e-13
Identities = 49/148 (33%), Positives = 82/148 (55%), Gaps = 4/148 (2%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIP---LLA 440
G+ + G++REK GDIL+QE + AQ+++ E+ ++ L +G + V+ S + +L
Sbjct: 108 GSFMSLGLTREKCGDILLQENR-AQIVVAKEVASYIEMNLQSIGKMKVSLSSVQADRILR 166
Query: 439 LEYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKT 260
L+ E + +SLR+D V + +SR K+ LI + V+VNW TV +
Sbjct: 167 LQEEWKEQSG---TVSSLRLDVVIAEMLHLSRQKVQPLIKNGLVKVNWKTVEQTAYECFP 223
Query: 259 GDVVSVSGKGRLKIGEI-NETKKGKFAV 179
GDV S+ G GR K+ + +TK+ K+ V
Sbjct: 224 GDVFSIRGYGRSKLFSVEGKTKRDKWRV 251
[198][TOP]
>UniRef100_B0ADQ8 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM
16795 RepID=B0ADQ8_9CLOT
Length = 179
Score = 77.4 bits (189), Expect = 8e-13
Identities = 45/144 (31%), Positives = 76/144 (52%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+L GI REK+GDI+I + QV++ ++ DF++ L+KV V +I + +
Sbjct: 31 GALLNLGIKREKIGDIIIHDNF-CQVVVSEDICDFIIINLEKVSKNKVKVKEITVKDIIE 89
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D+V + +SRS+ + LI + V V++ + +KT +
Sbjct: 90 SEQNFKEISFTVSSLRLDSVIGGVYNLSRSESLKLIKGEKVHVDYEKIISPSKEIKTNSL 149
Query: 250 VSVSGKGRLKIGEINETKKGKFAV 179
+SV G GR I + TKKG+ +
Sbjct: 150 ISVRGHGRAIIEIGDMTKKGRIKI 173
[199][TOP]
>UniRef100_Q732H2 S4 domain protein n=1 Tax=Bacillus cereus ATCC 10987
RepID=Q732H2_BACC1
Length = 255
Score = 77.0 bits (188), Expect = 1e-12
Identities = 47/145 (32%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + G++REK GDIL+QE++ AQ+++ E+V ++ L +G V V+ S + +
Sbjct: 106 GTFMSLGLTREKCGDILLQEDR-AQIVVAKEVVSYIEMNLQSIGKVKVSLSPVQGEKILQ 164
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D + + ISR K+ I + V+VNW TV + GDV
Sbjct: 165 IQETWGEKSGTVSSLRLDVMLAEMLHISRQKVQPFIKNGLVKVNWKTVEQTSYECYPGDV 224
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + TK+ K+ +
Sbjct: 225 FSVRGHGRSKLFSVEGRTKRDKWRI 249
[200][TOP]
>UniRef100_A8YUP5 Cell division protein n=2 Tax=Lactobacillus helveticus
RepID=A8YUP5_LACH4
Length = 266
Score = 77.0 bits (188), Expect = 1e-12
Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 4/147 (2%)
Frame = -2
Query: 607 AILGT----GISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLA 440
AILGT GI + GDI+ E Q ELVDF + ++G V +I
Sbjct: 109 AILGTLANSGIETDTFGDIITDENGKWQFFAKKELVDFFEEQITRIGRAQVKLKEITFKD 168
Query: 439 LEYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKT 260
+ + + AS+RIDAV S+ K SR ++ LI + V++NW + + +VK
Sbjct: 169 VLVPEDDSTEKTEIVASMRIDAVLSSISKQSRGQIQKLIENHLVKLNWHDIADSNIMVKE 228
Query: 259 GDVVSVSGKGRLKIGEINETKKGKFAV 179
D++S+ GR+ I +++ T+KGK+ V
Sbjct: 229 NDILSLRHFGRILIEDVSATRKGKYKV 255
[201][TOP]
>UniRef100_C6SRV0 Putative uncharacterized protein ylmH n=1 Tax=Streptococcus mutans
NN2025 RepID=C6SRV0_STRMN
Length = 262
Score = 77.0 bits (188), Expect = 1e-12
Identities = 48/143 (33%), Positives = 72/143 (50%), Gaps = 5/143 (3%)
Frame = -2
Query: 604 ILGT-----GISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLA 440
ILGT GI R LGDI++QE + AQV I +V ++ + K+G V +IP
Sbjct: 108 ILGTLINRLGIERYLLGDIIVQENR-AQVFIEKTMVSYLNAQVTKIGEAAVVFEEIPFER 166
Query: 439 LEYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKT 260
+ +S+R+D + +A K+SR K LI S+ V++N+ K ++
Sbjct: 167 QITSQSHIREMNVLVSSMRLDKIIAAVLKLSRRKANQLIESEKVKLNYLVQPKVSHLIDI 226
Query: 259 GDVVSVSGKGRLKIGEINETKKG 191
GD++SV G GR I N KG
Sbjct: 227 GDLISVRGYGRFTISRDNGLSKG 249
[202][TOP]
>UniRef100_C2PJ61 RNA-binding S4 domain protein n=1 Tax=Bacillus cereus MM3
RepID=C2PJ61_BACCE
Length = 241
Score = 77.0 bits (188), Expect = 1e-12
Identities = 47/145 (32%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + G++REK GDIL+QE++ AQ+++ E+V ++ L +G V V+ S + +
Sbjct: 92 GTFMSLGLTREKCGDILLQEDR-AQIVVAKEVVSYIEMNLQSIGKVKVSLSPVQGEKILQ 150
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D + + ISR K+ I + V+VNW TV + GDV
Sbjct: 151 MQETWGEKSGTVSSLRLDVMLAEMLHISRQKVQPFIKNGLVKVNWKTVEQTSYECYPGDV 210
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + TK+ K+ +
Sbjct: 211 FSVRGYGRSKLFSVEGRTKRDKWRI 235
[203][TOP]
>UniRef100_C2ERW0 Ribosomal protein S4e n=1 Tax=Lactobacillus vaginalis ATCC 49540
RepID=C2ERW0_9LACO
Length = 261
Score = 77.0 bits (188), Expect = 1e-12
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G +LG G+ R GDI + K QV++ ++ FV +D VG + V + L L
Sbjct: 111 GTLLGEGLERASFGDI-VTNGKRWQVVVTNQMARFVRERIDHVGKIKVKWKPVQLEELIV 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
T +SLRIDA+ +AGF SR++ L+ V++NW + + V+ D+
Sbjct: 170 PEDDWEQLSTTVSSLRIDAIIAAGFNYSRNRAKQLLEHGLVQINWEEMQRPDYSVREHDM 229
Query: 250 VSVSGKGRLK---IGEINETKKGKFAVEIIR 167
+SV GRL+ +G I K + + IIR
Sbjct: 230 LSVRHAGRLRMDQVGSITRKNKQRITLSIIR 260
[204][TOP]
>UniRef100_Q8DVD5 Putative uncharacterized protein ylmH n=1 Tax=Streptococcus mutans
RepID=Q8DVD5_STRMU
Length = 263
Score = 76.6 bits (187), Expect = 1e-12
Identities = 48/143 (33%), Positives = 72/143 (50%), Gaps = 5/143 (3%)
Frame = -2
Query: 604 ILGT-----GISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLA 440
ILGT GI R LGDI++QE + AQV I +V ++ + K+G V +IP
Sbjct: 109 ILGTLINRLGIERYLLGDIIVQENR-AQVFIEKTMVSYLNAQVTKIGKATVVFEEIPFER 167
Query: 439 LEYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKT 260
+ +S+R+D + +A K+SR K LI S+ V++N+ K ++
Sbjct: 168 QITSQSHIKEMNVLVSSMRLDKIIAAVLKLSRRKANQLIESEKVKLNYLVQPKVSQLIDI 227
Query: 259 GDVVSVSGKGRLKIGEINETKKG 191
GD++SV G GR I N KG
Sbjct: 228 GDLISVRGYGRFTISRDNGLSKG 250
[205][TOP]
>UniRef100_Q6HER7 S4 domain protein n=1 Tax=Bacillus thuringiensis serovar konkukian
RepID=Q6HER7_BACHK
Length = 255
Score = 76.6 bits (187), Expect = 1e-12
Identities = 47/145 (32%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + G++REK GDIL+QE++ AQ+++ E+V ++ L +G V V+ S + +
Sbjct: 106 GTFMSLGLTREKCGDILLQEDR-AQIVVAKEVVSYIEMNLQSIGKVKVSLSPVKGEKILQ 164
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D + + ISR K+ I + V+VNW TV + GDV
Sbjct: 165 IQETWGEKSGTVSSLRLDVMLAEMLHISRQKVQPFIKNGLVKVNWKTVEQTSYECYPGDV 224
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + TK+ K+ +
Sbjct: 225 FSVRGYGRSKLFSVEGRTKRDKWRI 249
[206][TOP]
>UniRef100_Q636C9 S4 domain protein n=1 Tax=Bacillus cereus E33L RepID=Q636C9_BACCZ
Length = 255
Score = 76.6 bits (187), Expect = 1e-12
Identities = 47/145 (32%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + G++REK GDIL+QE++ AQ+++ E+V ++ L +G V V+ S + +
Sbjct: 106 GTFMSLGLTREKCGDILLQEDR-AQIVVAKEVVSYIEMNLQSIGKVKVSLSPVKGEKILQ 164
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D + + ISR K+ I + V+VNW TV + GDV
Sbjct: 165 IQETWGEKSGTVSSLRLDVMLAEMLHISRQKVQPFIKNGLVKVNWKTVEQTSYECYPGDV 224
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + TK+ K+ +
Sbjct: 225 FSVRGYGRSKLFSVEGRTKRDKWRI 249
[207][TOP]
>UniRef100_Q5M4X4 Putative uncharacterized protein n=1 Tax=Streptococcus thermophilus
LMG 18311 RepID=Q5M4X4_STRT2
Length = 266
Score = 76.6 bits (187), Expect = 1e-12
Identities = 43/149 (28%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Frame = -2
Query: 610 GAILGT-GISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALE 434
GA+L G+ R+ GD+++ EE Q I L + + + K+G V VT ++
Sbjct: 111 GALLNQLGLERQVFGDVILDEEGRVQFNIASHLASYAIMTITKIGRVSVTLREVSKDEWI 170
Query: 433 YEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGD 254
+ + + +S+R+D V S K SRS + LI+S +++N+ + K+ I+ GD
Sbjct: 171 SNQEKYSQSFVLLSSMRLDNVLSTVLKTSRSNALKLIASGKIKLNYRQIEKSDQIISIGD 230
Query: 253 VVSVSGKGRLKIGE---INETKKGKFAVE 176
++SV G GR ++G+ I+++ K K ++
Sbjct: 231 MISVRGFGRFRLGQQEGISKSGKAKVVID 259
[208][TOP]
>UniRef100_Q5M0C7 Putative uncharacterized protein n=1 Tax=Streptococcus thermophilus
CNRZ1066 RepID=Q5M0C7_STRT1
Length = 266
Score = 76.6 bits (187), Expect = 1e-12
Identities = 43/149 (28%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Frame = -2
Query: 610 GAILGT-GISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALE 434
GA+L G+ R+ GD+++ EE Q I L + + + K+G V VT ++
Sbjct: 111 GALLNQLGLERQVFGDVILDEEGRVQFNIASHLASYAIMTITKIGRVSVTLREVSKDEWI 170
Query: 433 YEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGD 254
+ + + +S+R+D V S K SRS + LI+S +++N+ + K+ I+ GD
Sbjct: 171 SNQEKYSQSFVLLSSMRLDNVLSTVLKTSRSNALKLIASGKIKLNYRQIEKSDQIISIGD 230
Query: 253 VVSVSGKGRLKIGE---INETKKGKFAVE 176
++SV G GR ++G+ I+++ K K ++
Sbjct: 231 MISVRGFGRFRLGQQEGISKSGKAKVVID 259
[209][TOP]
>UniRef100_Q03L90 Cell division protein, contains S4-like domain n=1
Tax=Streptococcus thermophilus LMD-9 RepID=Q03L90_STRTD
Length = 266
Score = 76.6 bits (187), Expect = 1e-12
Identities = 45/156 (28%), Positives = 83/156 (53%), Gaps = 4/156 (2%)
Frame = -2
Query: 610 GAILGT-GISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALE 434
GA+L G+ R+ GD+++ EE Q I L + + + K+G V VT ++
Sbjct: 111 GALLNQLGLERQVFGDVILDEEGRVQFNIASHLASYAIMTITKIGRVSVTLREVSKDDWI 170
Query: 433 YEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGD 254
+ + + +S+R+D V S K SRS + LI+S +++N+ + K+ I+ GD
Sbjct: 171 SNQEKYSQSFVLLSSMRLDNVLSTVLKTSRSNALKLIASGKIKLNYRQIEKSDQIISIGD 230
Query: 253 VVSVSGKGRLKIGE---INETKKGKFAVEIIRYL*K 155
++SV G GR ++G+ I+++ K K ++ + L K
Sbjct: 231 MISVRGFGRFRLGQQEGISKSGKAKVVIDSLLRLQK 266
[210][TOP]
>UniRef100_D0DVB7 RNA-binding S4 domain-containing protein n=1 Tax=Lactobacillus
fermentum 28-3-CHN RepID=D0DVB7_LACFE
Length = 261
Score = 76.6 bits (187), Expect = 1e-12
Identities = 44/133 (33%), Positives = 68/133 (51%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+L TG+ R GDI+ +E Q++I +L D+++ + +G V K L
Sbjct: 111 GAVLSTGVERGAFGDIIASDEHW-QIIIQRQLSDYLIEQVTSIGKAKVRLEKRELQGARA 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
T ASLR+DAV +A F SR++ LI VRVNW + + + + D+
Sbjct: 170 PQEDWQELVTTVASLRLDAVVAASFNYSRNRAKQLIERGQVRVNWEEIDRPDYELASRDL 229
Query: 250 VSVSGKGRLKIGE 212
+SV GR+K+ E
Sbjct: 230 ISVRHGGRIKVQE 242
[211][TOP]
>UniRef100_C3G763 RNA-binding S4 domain protein n=2 Tax=Bacillus thuringiensis
RepID=C3G763_BACTU
Length = 241
Score = 76.6 bits (187), Expect = 1e-12
Identities = 47/145 (32%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + G++REK GDIL+QE++ AQ+++ E+V ++ L +G V V+ S + +
Sbjct: 92 GTFMSLGLTREKCGDILLQEDR-AQIVVAKEVVSYIEMNLQSIGKVKVSLSPVQGEKILQ 150
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D + + ISR K+ I + V+VNW TV + GDV
Sbjct: 151 IQETWGEKSGTVSSLRLDVMLAEMLHISRQKVQPFIKNGLVKVNWKTVEQTSYECYPGDV 210
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + TK+ K+ +
Sbjct: 211 FSVRGYGRSKLFSVEGRTKRDKWRI 235
[212][TOP]
>UniRef100_C2NLV3 RNA-binding S4 domain protein n=3 Tax=Bacillus cereus
RepID=C2NLV3_BACCE
Length = 241
Score = 76.6 bits (187), Expect = 1e-12
Identities = 47/145 (32%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + G++REK GDIL+QE++ AQ+++ E+V ++ L +G V V+ S + +
Sbjct: 92 GTFMSLGLTREKCGDILLQEDR-AQIVVAKEVVSYIEMNLQSIGKVKVSLSPVKGEKILQ 150
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D + + ISR K+ I + V+VNW TV + GDV
Sbjct: 151 IQETWGEKSGTVSSLRLDVMLAEMLHISRQKVQPFIKNGLVKVNWKTVEQTSYECYPGDV 210
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + TK+ K+ +
Sbjct: 211 FSVRGYGRSKLFSVEGRTKRDKWRI 235
[213][TOP]
>UniRef100_C2MPM7 RNA-binding S4 domain protein n=2 Tax=Bacillus cereus
RepID=C2MPM7_BACCE
Length = 241
Score = 76.6 bits (187), Expect = 1e-12
Identities = 47/145 (32%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + G++REK GDIL+QE++ AQ+++ E+V ++ L +G V V+ S + +
Sbjct: 92 GTFMSLGLTREKCGDILLQEDR-AQIVVAKEVVSYIEMNLQSIGKVKVSLSPVQGEKILQ 150
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D + + ISR K+ I + V+VNW TV + GDV
Sbjct: 151 IQETWGEKSGTVSSLRLDVMLAEMLHISRQKVQPFIKNGLVKVNWKTVEQTSYECYPGDV 210
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + TK+ K+ +
Sbjct: 211 FSVRGYGRSKLFSVEGRTKRDKWRI 235
[214][TOP]
>UniRef100_C2FG12 Ribosomal protein S4e n=1 Tax=Lactobacillus paracasei subsp.
paracasei ATCC 25302 RepID=C2FG12_LACPA
Length = 259
Score = 76.6 bits (187), Expect = 1e-12
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G +L G+ R+ GDI+ + Q + + D+V + +DK+G VGV ++ PL +Y
Sbjct: 109 GTLLNAGLDRDVFGDIITDGDIW-QFFVAAHMQDWVTSNVDKIGRVGVHFTEHPLA--DY 165
Query: 430 EPPRTNSFKTVEAS---LRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKT 260
P N ++ + S LR+D V + GF ISR + LI VR+ + + T
Sbjct: 166 VTPE-NDWEPLNFSVSALRLDTVVAHGFNISRQRAKTLIQGGKVRLKFGESDAPDAEIAT 224
Query: 259 GDVVSVSGKGRLKIGEI-NETKKGKFAV 179
D++SV G GRL++ EI E+KKGK V
Sbjct: 225 SDIISVRGFGRLRLDEILGESKKGKLRV 252
[215][TOP]
>UniRef100_C0WXT7 Ribosomal protein S4e n=1 Tax=Lactobacillus fermentum ATCC 14931
RepID=C0WXT7_LACFE
Length = 262
Score = 76.6 bits (187), Expect = 1e-12
Identities = 43/133 (32%), Positives = 68/133 (51%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+L TG+ R GDI+ +E Q+++ +L D+++ + +G V K L
Sbjct: 112 GAVLSTGVERGAFGDIIASDEHW-QIIVQRQLSDYLIEQVTSIGKAKVRLEKRELQGARV 170
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
T ASLR+DAV +A F SR++ LI VRVNW + + + + D+
Sbjct: 171 PQEDWQELVTTVASLRLDAVVAASFNYSRNRAKQLIERGQVRVNWEEIDRPDYELASRDL 230
Query: 250 VSVSGKGRLKIGE 212
+SV GR+K+ E
Sbjct: 231 ISVRHGGRIKVQE 243
[216][TOP]
>UniRef100_B7HLN1 S4 domain protein n=3 Tax=Bacillus cereus RepID=B7HLN1_BACC7
Length = 255
Score = 76.6 bits (187), Expect = 1e-12
Identities = 47/145 (32%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + G++REK GDIL+QE++ AQ+++ E+V ++ L +G V V+ S + +
Sbjct: 106 GTFMSLGLTREKCGDILLQEDR-AQIVVAKEVVSYIEMNLQSIGKVKVSLSPVQGEKILQ 164
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D + + ISR K+ I + V+VNW TV + GDV
Sbjct: 165 IQETWGEKSGTVSSLRLDVMLAEMLHISRQKVQPFIKNGLVKVNWKTVEQTSYECYPGDV 224
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + TK+ K+ +
Sbjct: 225 FSVRGYGRSKLFSVEGRTKRDKWRI 249
[217][TOP]
>UniRef100_A0RHR9 S4 domain protein n=6 Tax=Bacillus cereus group RepID=A0RHR9_BACAH
Length = 255
Score = 76.6 bits (187), Expect = 1e-12
Identities = 47/145 (32%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + G++REK GDIL+QE++ AQ+++ E+V ++ L +G V V+ S + +
Sbjct: 106 GTFMSLGLTREKCGDILLQEDR-AQIVVAKEVVSYIEMNLQSIGKVKVSLSPVKGEKILQ 164
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D + + ISR K+ I + V+VNW TV + GDV
Sbjct: 165 IQETWGEKSGTVSSLRLDVMLAEMLHISRQKVQPFIKNGLVKVNWKTVEQTSYECYPGDV 224
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + TK+ K+ +
Sbjct: 225 FSVRGYGRSKLFSVEGRTKRDKWRI 249
[218][TOP]
>UniRef100_C3L728 S4 domain protein n=8 Tax=Bacillus anthracis RepID=C3L728_BACAC
Length = 255
Score = 76.6 bits (187), Expect = 1e-12
Identities = 47/145 (32%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + G++REK GDIL+QE++ AQ+++ E+V ++ L +G V V+ S + +
Sbjct: 106 GTFMSLGLTREKCGDILLQEDR-AQIVVAKEVVSYIEMNLQSIGKVKVSLSPVKGEKILQ 164
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D + + ISR K+ I + V+VNW TV + GDV
Sbjct: 165 IQETWGEKSGTVSSLRLDVMLAEMLHISRQKVQPFIKNGLVKVNWKTVEQTSYECYPGDV 224
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + TK+ K+ +
Sbjct: 225 FSVRGYGRSKLFSVEGRTKRDKWRI 249
[219][TOP]
>UniRef100_B7GFB4 Uncharacterized conserved protein, contains S4-like domain n=1
Tax=Anoxybacillus flavithermus WK1 RepID=B7GFB4_ANOFW
Length = 257
Score = 76.3 bits (186), Expect = 2e-12
Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 1/147 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+L G+ REK GDI+I ++ Q ++ E+ FV + +G V+ + PL L
Sbjct: 108 GALLSLGVKREKFGDIVIVDDI-IQFVVAKEIAPFVKMNVTTIGKAKVSLEEQPLSQLLD 166
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+DA+ + F+ISR K I+ V+VNW TV + + GD+
Sbjct: 167 VKEEWEEETFTVSSLRLDAILAQCFRISRQKSQAFIAQNFVKVNWKTVDQAHMECQEGDL 226
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEI 173
+S+ G GR ++ I +TKK K+ + +
Sbjct: 227 LSLRGYGRCRLQAIVGQTKKEKWRIVV 253
[220][TOP]
>UniRef100_B2GB84 Putative uncharacterized protein n=1 Tax=Lactobacillus fermentum
IFO 3956 RepID=B2GB84_LACF3
Length = 262
Score = 76.3 bits (186), Expect = 2e-12
Identities = 43/133 (32%), Positives = 68/133 (51%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+L TG+ R GDI+ +E Q+++ +L D+++ + +G V K L
Sbjct: 112 GAVLSTGVERGAFGDIIASDEHW-QIIVQRQLSDYLIEQVTSIGKAKVRLEKRELQGARA 170
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
T ASLR+DAV +A F SR++ LI VRVNW + + + + D+
Sbjct: 171 PQEDWQELVTTVASLRLDAVVAASFNYSRNRAKQLIERGQVRVNWEEIDRPDYELASRDL 230
Query: 250 VSVSGKGRLKIGE 212
+SV GR+K+ E
Sbjct: 231 ISVRHGGRIKVQE 243
[221][TOP]
>UniRef100_A9BBY0 Putative uncharacterized protein n=1 Tax=Prochlorococcus marinus
str. MIT 9211 RepID=A9BBY0_PROM4
Length = 262
Score = 76.3 bits (186), Expect = 2e-12
Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Frame = -2
Query: 592 GISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYEPPRT- 416
GIS LGDI I ++GAQ++ E + + V + + + L R
Sbjct: 119 GISPSDLGDIWIVGDRGAQLICTREAGLLLNKQNGLIREVSIKYELLDINQLRLPSKRMP 178
Query: 415 NSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDVVSVSG 236
T+EAS R+D+++SAGF +SR+K+V I + +R+NW + VK+GD + + G
Sbjct: 179 KKITTIEASTRLDSISSAGFGLSRAKIVTEIKAGRIRLNWTRANQPFKDVKSGDRIHLEG 238
Query: 235 KGRLKIGEINETKKGKFAVEIIR 167
KG L I I TK+ ++ V + R
Sbjct: 239 KGSLLIQNIEPTKRARWRVVLQR 261
[222][TOP]
>UniRef100_C2U1L1 RNA-binding S4 domain protein n=4 Tax=Bacillus cereus
RepID=C2U1L1_BACCE
Length = 255
Score = 76.3 bits (186), Expect = 2e-12
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + G++REK GDIL+QE + AQ+++ E+V ++ L +G V V+ S + +
Sbjct: 106 GTFMSLGLTREKCGDILLQENR-AQIVVAKEIVSYIEMNLQAIGKVKVSLSAVQGEQILQ 164
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D + + ISR K+ I + V+VNW TV + GDV
Sbjct: 165 THETWGEKSGTVSSLRLDVMLAEMLHISRQKVQPFIKNGLVKVNWKTVEQTSYECYPGDV 224
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + TK+ K+ +
Sbjct: 225 FSVRGYGRSKLFSVEGRTKRDKWRI 249
[223][TOP]
>UniRef100_C5RAG0 Ribosomal protein S4e n=1 Tax=Weissella paramesenteroides ATCC
33313 RepID=C5RAG0_WEIPA
Length = 261
Score = 75.9 bits (185), Expect = 2e-12
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + GI+R+ +GDI+ E + + + F++ LD +G V ++ +
Sbjct: 110 GTFMHNGIARQSIGDIIKGEAETWYFVATKAIGTFILRHLDHIGKAKVRFEEVMANQIVV 169
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
T +SLR+D++ + G+ ISR+ +I VRVNW + K ++ D+
Sbjct: 170 VDDEWTIINTTVSSLRLDSIVANGYNISRNHAKQMIEHDLVRVNWTDINKPDYVLAVNDL 229
Query: 250 VSVSGKGRLKIGEINE-TKKGKFAV 179
VSV GRLKI E+N TKK K+ +
Sbjct: 230 VSVRKYGRLKIDELNGLTKKDKWRI 254
[224][TOP]
>UniRef100_A3I4G2 Putative uncharacterized protein n=1 Tax=Bacillus sp. B14905
RepID=A3I4G2_9BACI
Length = 262
Score = 75.9 bits (185), Expect = 2e-12
Identities = 51/154 (33%), Positives = 79/154 (51%), Gaps = 6/154 (3%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+L G++R K GDI + E + Q ++ E+ ++V L +G V V + E
Sbjct: 109 GALLSLGLNRSKFGDIRVSEHQ-IQFVVAKEVAEYVRLHLTGIGKVKVHVESLK----EQ 163
Query: 430 EPPRTNSFKTVE-----ASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIV 266
EP N + +E S+R+D + + K+SR K LI+ K VRVNW +
Sbjct: 164 EPLLINEDEWLEESHTVTSMRLDVIIATVLKVSRQKAQALITGKKVRVNWTERDAVAFEL 223
Query: 265 KTGDVVSVSGKGRLK-IGEINETKKGKFAVEIIR 167
+ GD++S+ G GRLK I TKK K +++ R
Sbjct: 224 QEGDILSIRGSGRLKIIMTEGRTKKDKIRLQVGR 257
[225][TOP]
>UniRef100_Q319D1 RNA-binding S4 n=1 Tax=Prochlorococcus marinus str. MIT 9312
RepID=Q319D1_PROM9
Length = 263
Score = 75.5 bits (184), Expect = 3e-12
Identities = 45/147 (30%), Positives = 87/147 (59%), Gaps = 1/147 (0%)
Frame = -2
Query: 604 ILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYEP 425
++ G+ + K+GDI ++GAQ +I ++ + + + +V V + + + L+
Sbjct: 116 LIENGVHKVKVGDIWTIGDRGAQGIIDNLDIEHLNEKIFYLRDVKVKINLVGIDELQIPS 175
Query: 424 PRTNSF-KTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDVV 248
RT TVEAS R+DA+ASAGF+ISR+K+++ I + +++N + V K +K GD +
Sbjct: 176 GRTKKLVNTVEASTRLDAIASAGFRISRTKIIERIENGMLKLNGSKVNKPTINLKIGDKL 235
Query: 247 SVSGKGRLKIGEINETKKGKFAVEIIR 167
+ KG ++I + TK+ ++ V+++R
Sbjct: 236 ELENKGFIEILNLEITKRERWKVKLLR 262
[226][TOP]
>UniRef100_C4Z019 Putative uncharacterized protein n=1 Tax=Eubacterium eligens ATCC
27750 RepID=C4Z019_EUBE2
Length = 251
Score = 75.5 bits (184), Expect = 3e-12
Identities = 47/151 (31%), Positives = 81/151 (53%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA++ GI RE LGDI I+ K A + V + DF++ L V + + C+K + +E
Sbjct: 103 GALMNLGIKREMLGDINIKG-KDAYLYCVSHIADFIIDNLSTVKHTHIQCTKTDINDIEC 161
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
P + + AS RIDA ++ K+SRS+ V+L ++ + +N + N +K D+
Sbjct: 162 SP-ELEDIEVLSASERIDAAVASLTKLSRSQAVELFRARKIFINSRQMENNSYQLKANDI 220
Query: 250 VSVSGKGR-LKIGEINETKKGKFAVEIIRYL 161
+ + G G+ + G ETKKG+ + +Y+
Sbjct: 221 LVIRGTGKFIYQGCGRETKKGRVYLSFKKYV 251
[227][TOP]
>UniRef100_C2EMG9 Ribosomal protein S4e n=1 Tax=Lactobacillus ultunensis DSM 16047
RepID=C2EMG9_9LACO
Length = 266
Score = 75.5 bits (184), Expect = 3e-12
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 6/149 (4%)
Frame = -2
Query: 607 AILGT----GISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLA 440
AILGT GI+ + GDIL + Q L EL +F + ++G V P+
Sbjct: 109 AILGTLANSGINTDTFGDILTDGKGKWQFLAKKELTEFFEEQITRIGKAQVKLK--PITF 166
Query: 439 LEYEPPRTNSFKTVE--ASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIV 266
E P +S + E AS+RIDA+ S K SR ++ +I+S V++NW + + +V
Sbjct: 167 KEILIPEDDSVERTEIMASMRIDAILSGISKQSRGQIQKMITSHLVKLNWHDIADSNIMV 226
Query: 265 KTGDVVSVSGKGRLKIGEINETKKGKFAV 179
K DV+S+ GR+ I +++ T+KGK+ V
Sbjct: 227 KENDVLSLRHFGRILIEDVSATRKGKYKV 255
[228][TOP]
>UniRef100_A2BSS9 Uncharacterized conserved protein, contains S4-like
domain-containing protein n=1 Tax=Prochlorococcus
marinus str. AS9601 RepID=A2BSS9_PROMS
Length = 263
Score = 75.1 bits (183), Expect = 4e-12
Identities = 44/147 (29%), Positives = 87/147 (59%), Gaps = 1/147 (0%)
Frame = -2
Query: 604 ILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYEP 425
++ G+++ K+GDI ++GAQ +I + + + + +V V + + + L+
Sbjct: 116 LIENGVNQIKVGDIWTIGDRGAQGIIDNSNIKHLDEKIFYLRDVKVKVNVVGIDELQIPS 175
Query: 424 PRTNSF-KTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDVV 248
R+ TVEAS R+DA+ASAGF++SR+K+++ I + +R+N + V K +K GD +
Sbjct: 176 GRSKKLVNTVEASTRLDAIASAGFRVSRTKIIERIENGMLRLNGSKVNKPTINLKIGDKL 235
Query: 247 SVSGKGRLKIGEINETKKGKFAVEIIR 167
+ KG ++I + TK+ ++ V+++R
Sbjct: 236 ELENKGFIEILNLEITKRERWKVKLLR 262
[229][TOP]
>UniRef100_D0BLB2 YlmH protein n=1 Tax=Granulicatella elegans ATCC 700633
RepID=D0BLB2_9LACT
Length = 262
Score = 75.1 bits (183), Expect = 4e-12
Identities = 44/147 (29%), Positives = 80/147 (54%), Gaps = 1/147 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+++G GI R++LGDI I + Q+L+ +++ ++ KVG + + + L
Sbjct: 110 GSLVGLGIDRDQLGDI-ISDGIRWQLLLTKQMLPYLKQNFQKVGKISIRIDEKEYTELIL 168
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ +SLR+D + ++ F ISR + +L+ S V+VNWA + +++ D+
Sbjct: 169 PIDHWTYTTAIVSSLRLDTLIASIFHISRQRSKELVESNKVKVNWAEEIRPDFMIELLDI 228
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEI 173
+S+ G GR++I I TKK K +EI
Sbjct: 229 ISIRGYGRIQIKNIEGRTKKDKIKLEI 255
[230][TOP]
>UniRef100_C7UDE1 S4 domain-containing protein (Fragment) n=1 Tax=Enterococcus
faecalis ATCC 4200 RepID=C7UDE1_ENTFA
Length = 141
Score = 75.1 bits (183), Expect = 4e-12
Identities = 46/121 (38%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Frame = -2
Query: 538 QVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYEPPRTNSFKTVEASLRIDAVASAG 359
QV I E+ FVV +DK+G + V + + +T +SLR+D+V SA
Sbjct: 14 QVFIAQEVAGFVVNQVDKIGKITVRLEERDYTQILIPKDGWQEERTTMSSLRLDSVISAV 73
Query: 358 FKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDVVSVSGKGRLKIGEI-NETKKGKFA 182
F ISR + LI S V+VNW T+ + D+VS+ G GRL+I E+ +TKK KF
Sbjct: 74 FNISRQRSKQLIESGKVKVNWTETTRPDFALDLLDIVSIRGFGRLQIQELEGKTKKEKFR 133
Query: 181 V 179
V
Sbjct: 134 V 134
[231][TOP]
>UniRef100_C2YVI1 RNA-binding S4 domain protein n=1 Tax=Bacillus cereus AH1271
RepID=C2YVI1_BACCE
Length = 241
Score = 75.1 bits (183), Expect = 4e-12
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + G++REK GDIL+QE++ AQ+++ E+V ++ L +G V+ S + +
Sbjct: 92 GTFMSLGLTREKCGDILLQEDR-AQIVVAKEVVSYIEMNLQTIGKAKVSLSPVQGEKILQ 150
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D + + ISR K+ I + V+VNW TV + GDV
Sbjct: 151 MQETWGEKSGTVSSLRLDVMLAEMLHISRQKVQPFIKNGLVKVNWKTVEQTSYECYPGDV 210
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + TK+ K+ +
Sbjct: 211 FSVRGYGRSKLFSVEGRTKRDKWRI 235
[232][TOP]
>UniRef100_B5QMU1 Cell division protein, S4-like domain n=2 Tax=Lactobacillus
rhamnosus RepID=B5QMU1_LACRH
Length = 259
Score = 75.1 bits (183), Expect = 4e-12
Identities = 47/145 (32%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G +L G+ R+ GDI + + + Q + + D+V++ + K+G VGV + PL A
Sbjct: 109 GTLLNAGLDRDVFGDI-VTDGRTWQFFVAAHMEDWVMSNITKIGRVGVHFTDYPLDAAVT 167
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
++LR+DA+ + GF +SR + LI + VR+N+ V T D+
Sbjct: 168 PENDWEPISFSVSALRLDAIVAHGFNMSRQRAKMLIQAGKVRLNFGENDAPDAEVATSDI 227
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
+SV G GRL++ I E+KKGK V
Sbjct: 228 ISVRGFGRLRLDAILGESKKGKLRV 252
[233][TOP]
>UniRef100_Q819R2 RNA binding protein n=1 Tax=Bacillus cereus ATCC 14579
RepID=Q819R2_BACCR
Length = 255
Score = 74.7 bits (182), Expect = 5e-12
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + G++REK GDIL+QE + AQ+++ E+V ++ L +G V V+ + + +
Sbjct: 106 GTFMSLGLTREKCGDILLQENR-AQIVVAKEIVSYIEMNLQSIGKVKVSLASVQGEQILQ 164
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D + + +SR K+ I + V+VNW TV + GDV
Sbjct: 165 IDETWGEKSGTVSSLRLDVMLAEMLHLSRQKVQPFIKNGLVKVNWKTVEQTSYECYPGDV 224
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + TK+ K+ +
Sbjct: 225 FSVRGYGRSKLFSVEGRTKRDKWRI 249
[234][TOP]
>UniRef100_Q03W41 Cell division protein, S4-like domain n=1 Tax=Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293
RepID=Q03W41_LEUMM
Length = 265
Score = 74.7 bits (182), Expect = 5e-12
Identities = 54/155 (34%), Positives = 87/155 (56%), Gaps = 7/155 (4%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGA-QVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALE 434
G+++ +GISR +GDIL + Q++I ++ ++ + K+G+V V+ + L +
Sbjct: 113 GSMMYSGISRNVIGDILYDQTHSRWQIIIDSKMQHYMQQMVTKIGHVQVSLIECDLNNVL 172
Query: 433 YEPPRTNSFKT---VEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVK 263
P N ++ + +SLR+D V SAGF +SRS LI VRVNW+ + K +
Sbjct: 173 ---PHINDWEENFLLLSSLRLDTVISAGFDLSRSGAKKLIEENQVRVNWSEIAKPDVELA 229
Query: 262 TGDVVSVSGKGRLKIGEINE-TKKGKF--AVEIIR 167
GDV+SV GR++I ++ +KKGK V IIR
Sbjct: 230 IGDVISVRKHGRVQIKLLDGISKKGKIKSIVNIIR 264
[235][TOP]
>UniRef100_A3PEJ0 Uncharacterized conserved protein, contains S4-like
domain-containing protein n=1 Tax=Prochlorococcus
marinus str. MIT 9301 RepID=A3PEJ0_PROM0
Length = 263
Score = 74.7 bits (182), Expect = 5e-12
Identities = 44/147 (29%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Frame = -2
Query: 604 ILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYEP 425
++ G+++ K+GDI ++GAQ +I ++ + + + +V V + + + L+
Sbjct: 116 LIKNGVNQLKVGDIWTIGDRGAQGIIDNLDIEHLDEKIFYLRDVKVKINVVGIDELQIPS 175
Query: 424 PRTNSF-KTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDVV 248
R+ TVEAS R+DA+ASAGF++SR+K+++ I + +R+N + V K +K GD +
Sbjct: 176 GRSKKLVNTVEASTRLDAIASAGFRVSRTKIIERIENGMLRLNGSKVNKPTINLKIGDKL 235
Query: 247 SVSGKGRLKIGEINETKKGKFAVEIIR 167
+ KG ++I + TK+ ++ V+++R
Sbjct: 236 ELENKGFIEILNLEITKRERWKVKLLR 262
[236][TOP]
>UniRef100_C7TIW2 RNA-binding S4 domain protein n=1 Tax=Lactobacillus rhamnosus Lc
705 RepID=C7TIW2_LACRL
Length = 259
Score = 74.7 bits (182), Expect = 5e-12
Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G +L G+ R+ GDI + + + Q + + D+V++ + K+G VGV + PL A
Sbjct: 109 GTLLNAGLDRDVFGDI-VTDGRTWQFFVAAHMEDWVMSNITKIGRVGVHFTDYPLDAAVT 167
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
++LR+DA+ + GF +SR + LI + VR+N+ V T D+
Sbjct: 168 PENDWEPISFSVSALRLDAIVAHGFNMSRQRAKMLIQAGKVRLNFGENDAPDAEVATSDI 227
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
+SV G GRL++ I E+KKGK +
Sbjct: 228 ISVRGFGRLRLDAILGESKKGKLRI 252
[237][TOP]
>UniRef100_C4FYR4 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC
49176 RepID=C4FYR4_ABIDE
Length = 262
Score = 74.7 bits (182), Expect = 5e-12
Identities = 50/154 (32%), Positives = 83/154 (53%), Gaps = 5/154 (3%)
Frame = -2
Query: 610 GAILGTGISREKLGDI-LIQEEKG---AQVLIVPELVDFVVTALDKVGNVGVTCSKIPLL 443
GAILG GI R+ +GDI + E+K A VL ++ DF+++ L ++G V+C+K+
Sbjct: 109 GAILGVGIDRKLIGDIYTVSEDKSVVKAFVLCQNKITDFLISELHQIGRCQVSCTKVETT 168
Query: 442 ALEYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVK 263
+ + + TV SLR+D + +SR+K+ LI S V VN A ++ + V
Sbjct: 169 DIMSVRRIEDKYGTV-PSLRLDVIIGEALNLSRTKVKALIDSDKVAVNSAQISSSHYQVM 227
Query: 262 TGDVVSVSGKGRLKIGE-INETKKGKFAVEIIRY 164
D++SV G G+ E + TKK + + + +Y
Sbjct: 228 PKDIISVRGFGKFIFYESLGRTKKDRIQIHLGKY 261
[238][TOP]
>UniRef100_C3CMV0 RNA-binding S4 domain protein n=3 Tax=Bacillus thuringiensis
RepID=C3CMV0_BACTU
Length = 255
Score = 74.7 bits (182), Expect = 5e-12
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + G++REK GDIL+QE + AQ+++ E+V ++ L +G V V+ S + +
Sbjct: 106 GTFMSLGLTREKCGDILLQENR-AQIVVAKEIVSYIEMNLQAIGKVKVSLSAVQGEQILQ 164
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D + + +SR K+ I + V+VNW TV + GDV
Sbjct: 165 IHETWGEKSGTVSSLRLDVMLAEMLHLSRQKVQPFIKNGLVKVNWKTVEQTSYECYPGDV 224
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + TK+ K+ +
Sbjct: 225 FSVRGYGRSKLFSVEGRTKRDKWRI 249
[239][TOP]
>UniRef100_C2BYX6 Ribosomal protein S4e n=1 Tax=Listeria grayi DSM 20601
RepID=C2BYX6_LISGR
Length = 258
Score = 74.7 bits (182), Expect = 5e-12
Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 1/147 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G ++ G+ R+ GDIL +E+ Q + + D++ T ++K+G V V ++PL
Sbjct: 109 GTLMSLGMKRDIFGDILEKEDIW-QFFVEASMKDYLSTQIEKIGKVNVMLEEVPLTDAIL 167
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D + +A ISR K L+ VRVNW T+ + D+
Sbjct: 168 THVDWIEKAITVSSLRLDVLIAASHNISRQKAKQLVQGGLVRVNWKTIENADFLCVAEDI 227
Query: 250 VSVSGKGRLKIGEIN-ETKKGKFAVEI 173
+SV G GR+K+ E N ++KK K + I
Sbjct: 228 ISVRGYGRIKLMETNGKSKKDKDKITI 254
[240][TOP]
>UniRef100_B7H6N3 S4 domain protein n=8 Tax=Bacillus cereus group RepID=B7H6N3_BACC4
Length = 241
Score = 74.7 bits (182), Expect = 5e-12
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + G++REK GDIL+QE + AQ+++ E+V ++ L +G V V+ + + +
Sbjct: 92 GTFMSLGLTREKCGDILLQENR-AQIVVAKEIVSYIEMNLQSIGKVKVSLASVQGEQILQ 150
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D + + +SR K+ I + V+VNW TV + GDV
Sbjct: 151 IDETWGEKSGTVSSLRLDVMLAEMLHLSRQKVQPFIKNGLVKVNWKTVEQTSYECYPGDV 210
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + TK+ K+ +
Sbjct: 211 FSVRGYGRSKLFSVEGRTKRDKWRI 235
[241][TOP]
>UniRef100_A9KKY9 RNA-binding S4 domain protein n=1 Tax=Clostridium phytofermentans
ISDg RepID=A9KKY9_CLOPH
Length = 263
Score = 74.3 bits (181), Expect = 7e-12
Identities = 58/153 (37%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GAIL GI R KLGDIL++ K A L DF+ T+L KV + V I
Sbjct: 115 GAILNVGIERSKLGDILVRG-KEAYCYCDSLLSDFITTSLSKVRHNVVRVEMIK----PD 169
Query: 430 EPPRTNSFKTVE---ASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKT 260
E T SF+ V AS R+D++ + F SRS + LI+ + V VN VT N ++K
Sbjct: 170 EVQATISFREVTGSVASFRLDSLIALAFHTSRSSITGLIAGEKVFVNARLVTSNSYMLKP 229
Query: 259 GDVVSVSGKGRLKIGEINE-TKKGKFAVEIIRY 164
D+VSV G G+ K E +KKG+ + Y
Sbjct: 230 DDIVSVRGYGKFKFKEQGGISKKGRIYATLSIY 262
[242][TOP]
>UniRef100_C3H595 RNA-binding S4 domain protein n=1 Tax=Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1 RepID=C3H595_BACTU
Length = 241
Score = 74.3 bits (181), Expect = 7e-12
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + G++REK GDIL+QE + AQ+++ E+V ++ L +G V V+ + + +
Sbjct: 92 GTFMSLGLTREKCGDILLQENR-AQIVVAKEIVSYIEMNLQSIGKVKVSLASVQGEKILQ 150
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D + + +SR K+ I + V+VNW TV + GDV
Sbjct: 151 IHETWGEKSGTVSSLRLDVMLAEMLHLSRQKVQPFIKNGLVKVNWKTVEQTSYECYPGDV 210
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + TK+ K+ +
Sbjct: 211 FSVRGYGRSKLFSVEGRTKRDKWRI 235
[243][TOP]
>UniRef100_C2P2P0 RNA-binding S4 domain protein n=4 Tax=Bacillus cereus group
RepID=C2P2P0_BACCE
Length = 241
Score = 74.3 bits (181), Expect = 7e-12
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + G++REK GDIL+QE + AQ+++ E+V ++ L +G V V+ + + +
Sbjct: 92 GTFMSLGLTREKCGDILLQENR-AQIVVAKEIVSYIEMNLQSIGKVKVSLASVQGEQILQ 150
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D + + +SR K+ I + V+VNW TV + GDV
Sbjct: 151 IHETWGEKSGTVSSLRLDVMLAEMLHLSRQKVQPFIKNGLVKVNWKTVEQTSYECYPGDV 210
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + TK+ K+ +
Sbjct: 211 FSVRGYGRSKLFSVEGRTKRDKWRI 235
[244][TOP]
>UniRef100_B1HQA6 Putative uncharacterized protein n=1 Tax=Lysinibacillus sphaericus
C3-41 RepID=B1HQA6_LYSSC
Length = 262
Score = 73.9 bits (180), Expect = 9e-12
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 6/154 (3%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+L G++R K GDI + + + Q ++ E+ ++V L +G V V + E
Sbjct: 109 GALLSLGLNRSKFGDIRVNDHQ-IQFVVAQEVAEYVRLHLTGIGKVKVHVESLK----EQ 163
Query: 430 EPPRTNSFKTVE-----ASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIV 266
EP N + +E S+R+D + + K+SR K LI+ K VRVNW +
Sbjct: 164 EPLLINEEEWLEESYTVTSMRLDVIIATVLKVSRQKAQALITGKKVRVNWTERDAVAFEL 223
Query: 265 KTGDVVSVSGKGRLK-IGEINETKKGKFAVEIIR 167
+ GD++S+ G GR+K I TKK K +++ R
Sbjct: 224 QEGDILSIRGSGRMKIIMTEGRTKKDKIRLQVGR 257
[245][TOP]
>UniRef100_A8G6G7 RNA-binding S4 n=1 Tax=Prochlorococcus marinus str. MIT 9215
RepID=A8G6G7_PROM2
Length = 263
Score = 73.9 bits (180), Expect = 9e-12
Identities = 45/147 (30%), Positives = 86/147 (58%), Gaps = 1/147 (0%)
Frame = -2
Query: 604 ILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYEP 425
++ G+++ K+GDI ++GAQ +I ++ + + + +V V + + + L
Sbjct: 116 LIENGVNKVKVGDIWTIGDRGAQGIIDNLDIEHLDEKIFYLRDVEVKINLVGIDELLIPA 175
Query: 424 PRTNSF-KTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDVV 248
RT TVEAS R+DA+ASAGF+ISR K+++ I + +++N + V K +K GD +
Sbjct: 176 GRTKKLVNTVEASTRLDAIASAGFRISRKKIIERIENGMLKLNGSKVNKPTINLKIGDKL 235
Query: 247 SVSGKGRLKIGEINETKKGKFAVEIIR 167
+ KG ++I + TK+ ++ V+++R
Sbjct: 236 ELENKGFIEIINLEITKRERWKVKLLR 262
[246][TOP]
>UniRef100_C2N583 RNA-binding S4 domain protein n=1 Tax=Bacillus cereus ATCC 10876
RepID=C2N583_BACCE
Length = 241
Score = 73.9 bits (180), Expect = 9e-12
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G + G++REK GDIL+QE + AQ+++ E+V ++ L +G V V+ + + +
Sbjct: 92 GTFMSLGLTREKCGDILLQENR-AQIVVAKEIVSYIEMNLQSIGKVKVSLASVHGEQILQ 150
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+SLR+D + + +SR K+ I + V+VNW TV + GDV
Sbjct: 151 IHETWGEKSGTVSSLRLDVMLAEMLHLSRQKVQPFIKNGLVKVNWKTVEQTSYECYPGDV 210
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAV 179
SV G GR K+ + TK+ K+ +
Sbjct: 211 FSVRGYGRSKLFSVEGRTKRDKWRI 235
[247][TOP]
>UniRef100_C0CHW6 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica
DSM 10507 RepID=C0CHW6_9FIRM
Length = 254
Score = 73.9 bits (180), Expect = 9e-12
Identities = 48/151 (31%), Positives = 76/151 (50%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
GA+L G+ R LGD+LI +E GA + F+ L +V + V ++ + E
Sbjct: 106 GALLNLGLERSMLGDLLI-DETGAYCFCKETMAGFIQDNLTRVRHTAVLTVQVMEME-EL 163
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
P+ + S+R+D + + F SRS++ I V VN +T NG + D+
Sbjct: 164 PQPKFREIQGTVPSIRLDVLIALAFGESRSRITPFIEGGKVFVNGRQITSNGYTPREKDL 223
Query: 250 VSVSGKGRLKIGEI-NETKKGKFAVEIIRYL 161
+SV KGR +I +TKKG++ V + RYL
Sbjct: 224 ISVRQKGRFIYEQILTQTKKGRYRVSVKRYL 254
[248][TOP]
>UniRef100_B1CBW0 Putative uncharacterized protein n=1 Tax=Anaerofustis
stercorihominis DSM 17244 RepID=B1CBW0_9FIRM
Length = 247
Score = 73.9 bits (180), Expect = 9e-12
Identities = 44/151 (29%), Positives = 79/151 (52%), Gaps = 1/151 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G+IL + R K+GDI I ++ ++ + + +F+V+ L K+G VT + +
Sbjct: 98 GSILSLSVDRSKVGDINILDDH-IEIFVYDTISEFLVSELTKIGGNNVTFYECDINEASV 156
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
P+ + S+R+DAV FK+SR++ + V++N V+K VK GD+
Sbjct: 157 IEPKFKELNIIVPSMRLDAVIGNIFKLSRNEANMFVKGGKVKINHNQVSKPAMTVKVGDM 216
Query: 250 VSVSGKGRLKI-GEINETKKGKFAVEIIRYL 161
+SV KGR + E +TKKG + + +++
Sbjct: 217 ISVRTKGRAIVDSESGQTKKGNTKLLVKKFV 247
[249][TOP]
>UniRef100_Q894C7 RNA binding protein n=1 Tax=Clostridium tetani RepID=Q894C7_CLOTE
Length = 258
Score = 73.6 bits (179), Expect = 1e-11
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 1/145 (0%)
Frame = -2
Query: 610 GAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEY 431
G I+ GI R KLGD ++++ V + L +++V L +G SK+ L E
Sbjct: 109 GGIMSLGIKRYKLGDFILKDNV-CYVAVCQSLSEYIVNNLTSIGRNPCIVSKLDLFTKEL 167
Query: 430 EPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDV 251
+ SLR+D+V ++ +SRSK +LI S V +++ TV +VK +
Sbjct: 168 PNYEFEDINIIITSLRMDSVVASLANLSRSKGEELIQSGKVLLDYLTVKDKAKVVKPNSI 227
Query: 250 VSVSGKGRLK-IGEINETKKGKFAV 179
+++ G G+ K I EI ET +G+ V
Sbjct: 228 ITIRGLGKFKFICEIGETNRGRIKV 252
[250][TOP]
>UniRef100_C5WHY1 Putative uncharacterized protein n=1 Tax=Streptococcus dysgalactiae
subsp. equisimilis GGS_124 RepID=C5WHY1_STRDG
Length = 263
Score = 73.6 bits (179), Expect = 1e-11
Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 6/158 (3%)
Frame = -2
Query: 610 GAILGT-----GISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPL 446
G ILGT GI R LGDI + E AQ++I +L+ +V+T + K+ V+ +IPL
Sbjct: 107 GQILGTLINELGIKRSLLGDIFV-ETGYAQLMINRQLLGYVLTTISKIARASVSLKEIPL 165
Query: 445 LALEYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIV 266
L + +SLR+D + + K SR++ + LI + V+VN+ V K +
Sbjct: 166 NQLIKSSNDAQLVDIMVSSLRLDRLVATVLKKSRAQAMTLIETDKVKVNYRQVHKVADHL 225
Query: 265 KTGDVVSVSGKGRLKIGEINE-TKKGKFAVEIIRYL*K 155
GD+VS+ G GR + N TK GK+ + + + + K
Sbjct: 226 AIGDMVSIRGYGRFTLLTDNGLTKNGKYKLTLSKMMHK 263