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[1][TOP]
>UniRef100_Q9LFG2 Diaminopimelate epimerase, chloroplastic n=1 Tax=Arabidopsis
thaliana RepID=DAPF_ARATH
Length = 362
Score = 268 bits (686), Expect(2) = 7e-77
Identities = 135/135 (100%), Positives = 135/135 (100%)
Frame = +2
Query: 2 VSTVSVAPQSRRVSNAFSRNLGSVSSLSFGFFEKEYCFKSPSLRVSAAASMDAVTAEKFS 181
VSTVSVAPQSRRVSNAFSRNLGSVSSLSFGFFEKEYCFKSPSLRVSAAASMDAVTAEKFS
Sbjct: 6 VSTVSVAPQSRRVSNAFSRNLGSVSSLSFGFFEKEYCFKSPSLRVSAAASMDAVTAEKFS 65
Query: 182 PASFLDKKETGVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIF 361
PASFLDKKETGVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIF
Sbjct: 66 PASFLDKKETGVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIF 125
Query: 362 AMPGVNGTDYAMRIF 406
AMPGVNGTDYAMRIF
Sbjct: 126 AMPGVNGTDYAMRIF 140
Score = 42.7 bits (99), Expect(2) = 7e-77
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNGVRC
Sbjct: 140 FNSDGSEPEMCGNGVRC 156
[2][TOP]
>UniRef100_A7PSY2 Chromosome chr8 scaffold_29, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PSY2_VITVI
Length = 370
Score = 157 bits (398), Expect(2) = 1e-43
Identities = 84/132 (63%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
Frame = +2
Query: 14 SVAPQSRRVSNAFSRNLGSVSSLSFGFFEKE-YCFKSPSLRVSAAASMDAVTAEKFSPAS 190
SV +S N + S SS+ F E F++P+ RVSA SM EK S S
Sbjct: 18 SVTRRSITSLNVSPSSSSSSSSVQPSFLTLETVAFRNPNFRVSAT-SMSIEALEKGSQTS 76
Query: 191 FLDKKETGVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMP 370
FLD+KE+G LHFVKYHGLGNDFILVDNRDSSEPK+T EQA KLCDRNFG+GADGVIFAMP
Sbjct: 77 FLDRKESGFLHFVKYHGLGNDFILVDNRDSSEPKLTPEQAVKLCDRNFGIGADGVIFAMP 136
Query: 371 GVNGTDYAMRIF 406
G+NGTDY MRIF
Sbjct: 137 GINGTDYTMRIF 148
Score = 42.7 bits (99), Expect(2) = 1e-43
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNGVRC
Sbjct: 148 FNSDGSEPEMCGNGVRC 164
[3][TOP]
>UniRef100_B9T434 Diaminopimelate epimerase, putative n=1 Tax=Ricinus communis
RepID=B9T434_RICCO
Length = 369
Score = 148 bits (373), Expect(2) = 8e-41
Identities = 71/99 (71%), Positives = 84/99 (84%), Gaps = 2/99 (2%)
Frame = +2
Query: 116 KSPSLRVS--AAASMDAVTAEKFSPASFLDKKETGVLHFVKYHGLGNDFILVDNRDSSEP 289
K+P+ R+ +AASM A EK S ASFLD++E+G+ HFVKY GLGNDFILVDNRDS+EP
Sbjct: 49 KNPNFRLLLVSAASMSAEAPEKISTASFLDRRESGIHHFVKYQGLGNDFILVDNRDSTEP 108
Query: 290 KITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRIF 406
+IT EQA +LCDRNFG+GADGVIFAMPG NGTDY+MRIF
Sbjct: 109 RITPEQAVRLCDRNFGIGADGVIFAMPGTNGTDYSMRIF 147
Score = 42.7 bits (99), Expect(2) = 8e-41
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNGVRC
Sbjct: 147 FNSDGSEPEMCGNGVRC 163
[4][TOP]
>UniRef100_C6T990 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T990_SOYBN
Length = 359
Score = 143 bits (360), Expect(2) = 3e-39
Identities = 74/122 (60%), Positives = 90/122 (73%), Gaps = 5/122 (4%)
Frame = +2
Query: 56 RNLGSVSSLSFGFFEK-----EYCFKSPSLRVSAAASMDAVTAEKFSPASFLDKKETGVL 220
R L SV+SLS + FK P+ R+ +SM TA K S ASFL++KE+G L
Sbjct: 17 RTLASVNSLSPRSTRSTLPTPQRTFKYPNSRL-VVSSMSTETAVKTSSASFLNRKESGFL 75
Query: 221 HFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMR 400
HF KYHGLGNDF+L+DNRDSSEPKI+ E+A +LCDRNFGVGADGVIF +PG++GTDY MR
Sbjct: 76 HFAKYHGLGNDFVLIDNRDSSEPKISAEKAVQLCDRNFGVGADGVIFVLPGISGTDYTMR 135
Query: 401 IF 406
IF
Sbjct: 136 IF 137
Score = 42.7 bits (99), Expect(2) = 3e-39
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNGVRC
Sbjct: 137 FNSDGSEPEMCGNGVRC 153
[5][TOP]
>UniRef100_C6TKD3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TKD3_SOYBN
Length = 359
Score = 142 bits (359), Expect(2) = 2e-38
Identities = 74/122 (60%), Positives = 90/122 (73%), Gaps = 5/122 (4%)
Frame = +2
Query: 56 RNLGSVSSLS-----FGFFEKEYCFKSPSLRVSAAASMDAVTAEKFSPASFLDKKETGVL 220
R L SV+SLS + FK P+ R+ A+SM TA K S ASFL+ KE+G L
Sbjct: 17 RTLASVNSLSPHSPRSTLPTPQRTFKYPNSRL-VASSMSTETAVKTSSASFLNLKESGFL 75
Query: 221 HFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMR 400
HF KYHGLGNDF+L+DNRD+SEP+I+ E+A +LCDRNFGVGADGVIF +PG+NGTDY MR
Sbjct: 76 HFAKYHGLGNDFVLIDNRDTSEPRISAEKAVQLCDRNFGVGADGVIFVLPGINGTDYTMR 135
Query: 401 IF 406
IF
Sbjct: 136 IF 137
Score = 40.4 bits (93), Expect(2) = 2e-38
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSD SEPEMCGNGVRC
Sbjct: 137 FNSDSSEPEMCGNGVRC 153
[6][TOP]
>UniRef100_B7FIP6 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=B7FIP6_MEDTR
Length = 221
Score = 137 bits (344), Expect(2) = 2e-37
Identities = 74/135 (54%), Positives = 96/135 (71%), Gaps = 2/135 (1%)
Frame = +2
Query: 8 TVSVAPQSRRVSNAFSRNLGSVSSLSFGFFEKEYCFKSPSLR-VSAAASMDAVTAEKFSP 184
+VS+ +RR ++ + L S S+S + FK P+ R V+ A+SM T K +
Sbjct: 8 SVSITTPTRRSLSSINSILPSSRSISA---TPQPTFKYPNSRLVALASSMKTETPIKTTT 64
Query: 185 A-SFLDKKETGVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIF 361
+ SFL KE+G LHF KYHGLGNDF+L+DNRDSSEPKI+ E+A +LCDRNFGVGADGVIF
Sbjct: 65 STSFLHHKESGFLHFAKYHGLGNDFVLIDNRDSSEPKISSEKAVQLCDRNFGVGADGVIF 124
Query: 362 AMPGVNGTDYAMRIF 406
+PG++GTDY MRIF
Sbjct: 125 VLPGIDGTDYTMRIF 139
Score = 42.7 bits (99), Expect(2) = 2e-37
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNGVRC
Sbjct: 139 FNSDGSEPEMCGNGVRC 155
[7][TOP]
>UniRef100_B9HCY9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HCY9_POPTR
Length = 314
Score = 129 bits (324), Expect(2) = 4e-35
Identities = 68/91 (74%), Positives = 75/91 (82%), Gaps = 1/91 (1%)
Frame = +2
Query: 137 SAAASMDAVTAEKFSPASFLDKKE-TGVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAA 313
SAAA + T+ K S SFLD KE + LHFVKYHGLGNDFI++DNRDSSEPKI EQA
Sbjct: 5 SAAAPQE--TSSKSS--SFLDHKEGSRFLHFVKYHGLGNDFIVLDNRDSSEPKIRPEQAV 60
Query: 314 KLCDRNFGVGADGVIFAMPGVNGTDYAMRIF 406
KLCDRNFG+GADGVIFA+PGVNGTDY MRIF
Sbjct: 61 KLCDRNFGIGADGVIFALPGVNGTDYTMRIF 91
Score = 42.7 bits (99), Expect(2) = 4e-35
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNGVRC
Sbjct: 91 FNSDGSEPEMCGNGVRC 107
[8][TOP]
>UniRef100_B9IGD7 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9IGD7_POPTR
Length = 281
Score = 127 bits (320), Expect(2) = 1e-34
Identities = 58/63 (92%), Positives = 61/63 (96%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
LHFVKYHGLGNDFILVDNRDSSEPKIT EQAAKLCDRNFG+GADGVIFA+PG+NGTDY M
Sbjct: 1 LHFVKYHGLGNDFILVDNRDSSEPKITPEQAAKLCDRNFGIGADGVIFALPGINGTDYTM 60
Query: 398 RIF 406
RIF
Sbjct: 61 RIF 63
Score = 42.7 bits (99), Expect(2) = 1e-34
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNGVRC
Sbjct: 63 FNSDGSEPEMCGNGVRC 79
[9][TOP]
>UniRef100_B8LLS8 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LLS8_PICSI
Length = 375
Score = 127 bits (318), Expect(2) = 2e-34
Identities = 65/96 (67%), Positives = 74/96 (77%), Gaps = 2/96 (2%)
Frame = +2
Query: 125 SLRVSAAASMDAVTAEKFSPASFLD--KKETGVLHFVKYHGLGNDFILVDNRDSSEPKIT 298
+L +S + +M + K S F + + VLHFVKYHGLGNDFILVDNRDS EPKI+
Sbjct: 58 TLHISCSNTMLGGLSYKGSVTDFPEDSNNKKDVLHFVKYHGLGNDFILVDNRDSLEPKIS 117
Query: 299 QEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRIF 406
EQA KLCDRNFGVGADGVIFAMPGVNGTDY+MRIF
Sbjct: 118 PEQAIKLCDRNFGVGADGVIFAMPGVNGTDYSMRIF 153
Score = 42.4 bits (98), Expect(2) = 2e-34
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNG+RC
Sbjct: 153 FNSDGSEPEMCGNGIRC 169
[10][TOP]
>UniRef100_B4FVI8 Putative uncharacterized protein n=2 Tax=Zea mays
RepID=B4FVI8_MAIZE
Length = 353
Score = 126 bits (316), Expect(2) = 3e-34
Identities = 62/96 (64%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = +2
Query: 122 PSLRVSAAASMDAVTAEKFSPASFLDKKETG-VLHFVKYHGLGNDFILVDNRDSSEPKIT 298
P+ A ASM + SFL+++E+ LHFVKY GLGNDFI+VDNRDSS PK+T
Sbjct: 36 PAAPRRAVASMAVSAPRSGAATSFLERRESERALHFVKYQGLGNDFIMVDNRDSSVPKVT 95
Query: 299 QEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRIF 406
E+AAKLCDRNFG+GADGVIF MPGVNG DY MRIF
Sbjct: 96 PEEAAKLCDRNFGIGADGVIFVMPGVNGADYTMRIF 131
Score = 42.7 bits (99), Expect(2) = 3e-34
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNGVRC
Sbjct: 131 FNSDGSEPEMCGNGVRC 147
[11][TOP]
>UniRef100_C4J3L7 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C4J3L7_MAIZE
Length = 350
Score = 126 bits (316), Expect(2) = 3e-34
Identities = 62/96 (64%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = +2
Query: 122 PSLRVSAAASMDAVTAEKFSPASFLDKKETG-VLHFVKYHGLGNDFILVDNRDSSEPKIT 298
P+ A ASM + SFL+++E+ LHFVKY GLGNDFI+VDNRDSS PK+T
Sbjct: 36 PAAPRRAVASMAVSAPRSGAATSFLERRESERALHFVKYQGLGNDFIMVDNRDSSVPKVT 95
Query: 299 QEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRIF 406
E+AAKLCDRNFG+GADGVIF MPGVNG DY MRIF
Sbjct: 96 PEEAAKLCDRNFGIGADGVIFVMPGVNGADYTMRIF 131
Score = 42.7 bits (99), Expect(2) = 3e-34
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNGVRC
Sbjct: 131 FNSDGSEPEMCGNGVRC 147
[12][TOP]
>UniRef100_Q2QNF7 Putative diaminopimelate epimerase, chloroplastic n=1 Tax=Oryza
sativa Japonica Group RepID=DAPF_ORYSJ
Length = 354
Score = 125 bits (313), Expect(2) = 6e-34
Identities = 60/88 (68%), Positives = 71/88 (80%), Gaps = 1/88 (1%)
Frame = +2
Query: 146 ASMDAVTAEKFSPASFLDKKETG-VLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLC 322
A+M T + A+FL+++E+ LHFVKY GLGNDFI+VDNRDS+ PK+T E+AAKLC
Sbjct: 45 AAMAVSTPRSAAAAAFLERRESERALHFVKYQGLGNDFIMVDNRDSAVPKVTPEEAAKLC 104
Query: 323 DRNFGVGADGVIFAMPGVNGTDYAMRIF 406
DRNFGVGADGVIF MPGVNG DY MRIF
Sbjct: 105 DRNFGVGADGVIFVMPGVNGADYTMRIF 132
Score = 42.7 bits (99), Expect(2) = 6e-34
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNGVRC
Sbjct: 132 FNSDGSEPEMCGNGVRC 148
[13][TOP]
>UniRef100_B4F833 Diaminopimelate epimerase n=1 Tax=Zea mays RepID=B4F833_MAIZE
Length = 352
Score = 124 bits (312), Expect(2) = 8e-34
Identities = 61/90 (67%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Frame = +2
Query: 140 AAASMDAVTAEKFSPASFLDKKETG-VLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAK 316
A ASM + ASFL+++E+ LHFVKY GLGNDFI+VDNRDSS PK+T E+AAK
Sbjct: 41 AVASMAVSAPRSGAAASFLERRESERALHFVKYQGLGNDFIMVDNRDSSVPKVTPEEAAK 100
Query: 317 LCDRNFGVGADGVIFAMPGVNGTDYAMRIF 406
LCDRNFG+GADGVIF MPGVN DY MRIF
Sbjct: 101 LCDRNFGIGADGVIFVMPGVNDADYTMRIF 130
Score = 42.7 bits (99), Expect(2) = 8e-34
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNGVRC
Sbjct: 130 FNSDGSEPEMCGNGVRC 146
[14][TOP]
>UniRef100_A2ZLS4 Putative diaminopimelate epimerase, chloroplastic n=1 Tax=Oryza
sativa Indica Group RepID=DAPF_ORYSI
Length = 357
Score = 124 bits (310), Expect(2) = 1e-33
Identities = 59/88 (67%), Positives = 71/88 (80%), Gaps = 1/88 (1%)
Frame = +2
Query: 146 ASMDAVTAEKFSPASFLDKKETG-VLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLC 322
A+M T + A+FL+++E+ LHFVKY GLGNDFI++DNRDS+ PK+T E+AAKLC
Sbjct: 48 AAMAVSTPRSAAAAAFLERRESERALHFVKYQGLGNDFIMMDNRDSAVPKVTPEEAAKLC 107
Query: 323 DRNFGVGADGVIFAMPGVNGTDYAMRIF 406
DRNFGVGADGVIF MPGVNG DY MRIF
Sbjct: 108 DRNFGVGADGVIFVMPGVNGADYTMRIF 135
Score = 42.7 bits (99), Expect(2) = 1e-33
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNGVRC
Sbjct: 135 FNSDGSEPEMCGNGVRC 151
[15][TOP]
>UniRef100_C5YPW9 Putative uncharacterized protein Sb08g018560 n=1 Tax=Sorghum
bicolor RepID=C5YPW9_SORBI
Length = 425
Score = 118 bits (296), Expect(2) = 6e-32
Identities = 62/112 (55%), Positives = 78/112 (69%), Gaps = 1/112 (0%)
Frame = +2
Query: 74 SSLSFGFFEKEYCFKSPSLRVSAAASMDAVTAEKFSPASFLDKKETG-VLHFVKYHGLGN 250
S ++ F E+ ++ +VSA S A A SF++++E+ LHFVKY GLGN
Sbjct: 46 SGIATSFLERRESERALHYQVSAPRSGAAAAA------SFVERRESERALHFVKYQGLGN 99
Query: 251 DFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRIF 406
DFILVDNRDS PK+T E+A KLCDRNFG+GADGVIF MPGVNG DY ++IF
Sbjct: 100 DFILVDNRDSWVPKVTPEEAVKLCDRNFGIGADGVIFVMPGVNGADYNIKIF 151
Score = 42.7 bits (99), Expect(2) = 6e-32
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNGVRC
Sbjct: 151 FNSDGSEPEMCGNGVRC 167
[16][TOP]
>UniRef100_Q31LW2 Diaminopimelate epimerase n=2 Tax=Synechococcus elongatus
RepID=DAPF_SYNE7
Length = 280
Score = 105 bits (263), Expect(2) = 5e-28
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
L F KYHGLGNDFILVDNR+S EP++T EQA ++CDRNFGVGADGVIFA+PG +DY M
Sbjct: 3 LQFAKYHGLGNDFILVDNRESGEPRLTPEQAVQVCDRNFGVGADGVIFALPGSGDSDYVM 62
Query: 398 RIF 406
RIF
Sbjct: 63 RIF 65
Score = 42.4 bits (98), Expect(2) = 5e-28
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNG+RC
Sbjct: 65 FNSDGSEPEMCGNGIRC 81
[17][TOP]
>UniRef100_B2J3A7 Diaminopimelate epimerase n=1 Tax=Nostoc punctiforme PCC 73102
RepID=DAPF_NOSP7
Length = 279
Score = 105 bits (263), Expect(2) = 5e-28
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F KYHGLGNDFIL+DNR SS P +T EQA +LCDR+FG+GADGVIFA+PG NGTDY M
Sbjct: 3 IEFTKYHGLGNDFILIDNRSSSLPVLTPEQAIQLCDRHFGIGADGVIFALPGENGTDYTM 62
Query: 398 RIF 406
RIF
Sbjct: 63 RIF 65
Score = 42.4 bits (98), Expect(2) = 5e-28
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNG+RC
Sbjct: 65 FNSDGSEPEMCGNGIRC 81
[18][TOP]
>UniRef100_P74667 Diaminopimelate epimerase n=1 Tax=Synechocystis sp. PCC 6803
RepID=DAPF_SYNY3
Length = 279
Score = 103 bits (258), Expect(2) = 2e-27
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
L F KYHGLGNDFILVDNR S+EP +T +QA +LCDR+FG+GADGVIFA+PG GTDY M
Sbjct: 3 LSFSKYHGLGNDFILVDNRQSTEPCLTPDQAQQLCDRHFGIGADGVIFALPGQGGTDYTM 62
Query: 398 RIF 406
RIF
Sbjct: 63 RIF 65
Score = 42.4 bits (98), Expect(2) = 2e-27
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNG+RC
Sbjct: 65 FNSDGSEPEMCGNGIRC 81
[19][TOP]
>UniRef100_Q3M8I9 Diaminopimelate epimerase n=1 Tax=Anabaena variabilis ATCC 29413
RepID=Q3M8I9_ANAVT
Length = 282
Score = 103 bits (257), Expect(2) = 2e-27
Identities = 45/63 (71%), Positives = 53/63 (84%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F KYHGLGNDFIL+DNR S P IT E+A ++CDR+FG+GADGVIFA+PG NGTDY M
Sbjct: 6 IEFTKYHGLGNDFILIDNRASKTPAITPEKAVEMCDRHFGIGADGVIFALPGENGTDYTM 65
Query: 398 RIF 406
RIF
Sbjct: 66 RIF 68
Score = 42.4 bits (98), Expect(2) = 2e-27
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNG+RC
Sbjct: 68 FNSDGSEPEMCGNGIRC 84
[20][TOP]
>UniRef100_A0ZFP0 Diaminopimelate epimerase n=1 Tax=Nodularia spumigena CCY9414
RepID=A0ZFP0_NODSP
Length = 279
Score = 103 bits (257), Expect(2) = 2e-27
Identities = 47/63 (74%), Positives = 53/63 (84%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F KYHGLGNDFILVDNR SS P +T EQA +LCDR+FG+GADGVIFA+PG NG DY M
Sbjct: 3 IEFTKYHGLGNDFILVDNRASSLPVLTPEQAIQLCDRHFGIGADGVIFALPGENGADYTM 62
Query: 398 RIF 406
RIF
Sbjct: 63 RIF 65
Score = 42.4 bits (98), Expect(2) = 2e-27
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNG+RC
Sbjct: 65 FNSDGSEPEMCGNGIRC 81
[21][TOP]
>UniRef100_Q8YVD0 Diaminopimelate epimerase 2 n=1 Tax=Nostoc sp. PCC 7120
RepID=DAPF2_ANASP
Length = 279
Score = 103 bits (257), Expect(2) = 2e-27
Identities = 45/63 (71%), Positives = 53/63 (84%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F KYHGLGNDFIL+DNR S P IT E+A ++CDR+FG+GADGVIFA+PG NGTDY M
Sbjct: 3 IEFTKYHGLGNDFILIDNRASKTPAITPEKAVEMCDRHFGIGADGVIFALPGENGTDYTM 62
Query: 398 RIF 406
RIF
Sbjct: 63 RIF 65
Score = 42.4 bits (98), Expect(2) = 2e-27
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNG+RC
Sbjct: 65 FNSDGSEPEMCGNGIRC 81
[22][TOP]
>UniRef100_Q116P1 Diaminopimelate epimerase n=1 Tax=Trichodesmium erythraeum IMS101
RepID=DAPF_TRIEI
Length = 278
Score = 101 bits (251), Expect(2) = 1e-26
Identities = 45/61 (73%), Positives = 51/61 (83%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRI 403
F KYHGLGNDFIL+DNR +P +T EQA +LCDRNFG+GADGVIFA+PGV TDY MRI
Sbjct: 5 FTKYHGLGNDFILIDNRHQLQPILTPEQAIELCDRNFGIGADGVIFALPGVKQTDYTMRI 64
Query: 404 F 406
F
Sbjct: 65 F 65
Score = 42.4 bits (98), Expect(2) = 1e-26
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNG+RC
Sbjct: 65 FNSDGSEPEMCGNGIRC 81
[23][TOP]
>UniRef100_B9YM56 Diaminopimelate epimerase n=1 Tax='Nostoc azollae' 0708
RepID=B9YM56_ANAAZ
Length = 279
Score = 100 bits (250), Expect(2) = 1e-26
Identities = 45/63 (71%), Positives = 51/63 (80%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F KYHGLGNDFIL+DNR S P IT +QA K CDR+FG+GADGVIFA+PG N TDY M
Sbjct: 3 IEFTKYHGLGNDFILIDNRSSLTPVITPQQAVKWCDRHFGIGADGVIFALPGQNDTDYTM 62
Query: 398 RIF 406
RIF
Sbjct: 63 RIF 65
Score = 42.4 bits (98), Expect(2) = 1e-26
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNG+RC
Sbjct: 65 FNSDGSEPEMCGNGIRC 81
[24][TOP]
>UniRef100_B5W4D7 Diaminopimelate epimerase n=1 Tax=Arthrospira maxima CS-328
RepID=B5W4D7_SPIMA
Length = 287
Score = 99.0 bits (245), Expect(2) = 5e-26
Identities = 43/63 (68%), Positives = 51/63 (80%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F KYHGLGNDFIL+DNR SEP TQ QA ++CDR+FG+GADGVIFA+PG +DY M
Sbjct: 3 IEFTKYHGLGNDFILIDNRHQSEPICTQRQAVQMCDRHFGIGADGVIFALPGDGASDYTM 62
Query: 398 RIF 406
RIF
Sbjct: 63 RIF 65
Score = 42.4 bits (98), Expect(2) = 5e-26
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNG+RC
Sbjct: 65 FNSDGSEPEMCGNGIRC 81
[25][TOP]
>UniRef100_A0YIC3 Diaminopimelate epimerase n=1 Tax=Lyngbya sp. PCC 8106
RepID=A0YIC3_9CYAN
Length = 284
Score = 102 bits (254), Expect(2) = 5e-26
Identities = 45/63 (71%), Positives = 52/63 (82%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F KY GLGNDFIL+DNR SEP IT EQA ++CDRNFG+GADGVIFA+PG + TDY M
Sbjct: 3 IEFTKYQGLGNDFILIDNRHQSEPLITPEQAMQMCDRNFGIGADGVIFALPGTSNTDYTM 62
Query: 398 RIF 406
RIF
Sbjct: 63 RIF 65
Score = 38.9 bits (89), Expect(2) = 5e-26
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSD SEP+MCGNG+RC
Sbjct: 65 FNSDSSEPQMCGNGIRC 81
[26][TOP]
>UniRef100_B7KH06 Diaminopimelate epimerase n=1 Tax=Cyanothece sp. PCC 7424
RepID=DAPF_CYAP7
Length = 281
Score = 97.8 bits (242), Expect(2) = 7e-26
Identities = 41/63 (65%), Positives = 51/63 (80%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F KYHGLGNDFIL+DNR SEP ++ E A ++CDR+FG+GADGVIF +PG + TDY M
Sbjct: 3 IEFTKYHGLGNDFILIDNRHGSEPMVSPEMAVEMCDRHFGIGADGVIFVLPGTSQTDYQM 62
Query: 398 RIF 406
RIF
Sbjct: 63 RIF 65
Score = 43.1 bits (100), Expect(2) = 7e-26
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +3
Query: 393 QCGFFNSDGSEPEMCGNGVRC 455
Q FNSDGSEPEMCGNG+RC
Sbjct: 61 QMRIFNSDGSEPEMCGNGIRC 81
[27][TOP]
>UniRef100_A8J8B3 Diaminopimelate epimerase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8J8B3_CHLRE
Length = 318
Score = 98.2 bits (243), Expect(2) = 9e-26
Identities = 51/89 (57%), Positives = 59/89 (66%), Gaps = 6/89 (6%)
Frame = +2
Query: 158 AVTAEKFSPASFLDKKETGV------LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKL 319
AV+A F A+ + V L F KY GLGNDFILVDNR +SEP +T EQA K+
Sbjct: 6 AVSARAFGRAAGRSRSSVRVMASAKPLTFSKYQGLGNDFILVDNRHTSEPVVTPEQAVKI 65
Query: 320 CDRNFGVGADGVIFAMPGVNGTDYAMRIF 406
CDRNFG+G DGVIFA+P V TD MRIF
Sbjct: 66 CDRNFGIGGDGVIFALPPVGDTDLTMRIF 94
Score = 42.4 bits (98), Expect(2) = 9e-26
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNG+RC
Sbjct: 94 FNSDGSEPEMCGNGIRC 110
[28][TOP]
>UniRef100_B1XP39 Diaminopimelate epimerase n=1 Tax=Synechococcus sp. PCC 7002
RepID=DAPF_SYNP2
Length = 281
Score = 97.8 bits (242), Expect(2) = 1e-25
Identities = 44/64 (68%), Positives = 51/64 (79%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYA 394
VL F KY GLGNDFIL+DNR + P +T EQA +LCDR+FG+GADGVIFA+PG G DY
Sbjct: 2 VLEFTKYQGLGNDFILLDNRQQTTPLVTPEQAIQLCDRHFGIGADGVIFALPGQAGADYT 61
Query: 395 MRIF 406
MRIF
Sbjct: 62 MRIF 65
Score = 42.4 bits (98), Expect(2) = 1e-25
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNG+RC
Sbjct: 65 FNSDGSEPEMCGNGIRC 81
[29][TOP]
>UniRef100_B1WRQ3 Diaminopimelate epimerase n=1 Tax=Cyanothece sp. ATCC 51142
RepID=B1WRQ3_CYAA5
Length = 290
Score = 95.9 bits (237), Expect(2) = 1e-24
Identities = 42/64 (65%), Positives = 53/64 (82%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYA 394
++ F KY GLGNDFILVDNR SS P ++ ++A KLCDR+FG+GADGVIFA+PG + +DY
Sbjct: 12 IMEFTKYQGLGNDFILVDNRHSSTPLLSPDEAVKLCDRHFGIGADGVIFALPGDDQSDYT 71
Query: 395 MRIF 406
MRIF
Sbjct: 72 MRIF 75
Score = 41.2 bits (95), Expect(2) = 1e-24
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEP+MCGNG+RC
Sbjct: 75 FNSDGSEPQMCGNGIRC 91
[30][TOP]
>UniRef100_Q4C9K0 Diaminopimelate epimerase n=1 Tax=Crocosphaera watsonii WH 8501
RepID=Q4C9K0_CROWT
Length = 278
Score = 95.9 bits (237), Expect(2) = 1e-24
Identities = 42/63 (66%), Positives = 51/63 (80%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F KY GLGNDFILVDNR S+ P ++ E+A KLCDR+FG+GADGVIFA+PG +DY M
Sbjct: 1 MEFTKYQGLGNDFILVDNRHSTTPSLSPEEAVKLCDRHFGIGADGVIFALPGDENSDYTM 60
Query: 398 RIF 406
RIF
Sbjct: 61 RIF 63
Score = 41.2 bits (95), Expect(2) = 1e-24
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEP+MCGNG+RC
Sbjct: 63 FNSDGSEPQMCGNGIRC 79
[31][TOP]
>UniRef100_B0JJ58 Diaminopimelate epimerase n=1 Tax=Microcystis aeruginosa NIES-843
RepID=DAPF_MICAN
Length = 281
Score = 94.4 bits (233), Expect(2) = 1e-24
Identities = 43/61 (70%), Positives = 48/61 (78%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRI 403
F KY GLGNDFIL+DNR S EP IT E A +CDR+FG+GADGVIFA+PG TDY MRI
Sbjct: 5 FTKYQGLGNDFILIDNRHSPEPLITAEMAVAMCDRHFGIGADGVIFALPGQAETDYTMRI 64
Query: 404 F 406
F
Sbjct: 65 F 65
Score = 42.4 bits (98), Expect(2) = 1e-24
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNG+RC
Sbjct: 65 FNSDGSEPEMCGNGIRC 81
[32][TOP]
>UniRef100_A8YK88 Similar to Q4C9K0_CROWT Diaminopimelate epimerase n=1
Tax=Microcystis aeruginosa PCC 7806 RepID=A8YK88_MICAE
Length = 281
Score = 94.0 bits (232), Expect(2) = 2e-24
Identities = 43/61 (70%), Positives = 48/61 (78%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRI 403
F KY GLGNDFIL+DNR S EP IT E A +CDR+FG+GADGVIFA+PG TDY MRI
Sbjct: 5 FTKYQGLGNDFILIDNRHSPEPLITPEIAVAMCDRHFGIGADGVIFALPGQAATDYTMRI 64
Query: 404 F 406
F
Sbjct: 65 F 65
Score = 42.4 bits (98), Expect(2) = 2e-24
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNG+RC
Sbjct: 65 FNSDGSEPEMCGNGIRC 81
[33][TOP]
>UniRef100_C7QMM0 Diaminopimelate epimerase n=1 Tax=Cyanothece sp. PCC 8802
RepID=C7QMM0_CYAP0
Length = 281
Score = 94.4 bits (233), Expect(2) = 3e-24
Identities = 41/63 (65%), Positives = 49/63 (77%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F KY GLGNDFIL+DNR S P ++ EQA K+CDR+FG+GADGVIF +PG TDY M
Sbjct: 3 IEFSKYQGLGNDFILIDNRSSHTPLVSPEQAIKMCDRHFGIGADGVIFVLPGTANTDYTM 62
Query: 398 RIF 406
RIF
Sbjct: 63 RIF 65
Score = 41.2 bits (95), Expect(2) = 3e-24
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEP+MCGNG+RC
Sbjct: 65 FNSDGSEPQMCGNGIRC 81
[34][TOP]
>UniRef100_B7K1E7 Diaminopimelate epimerase n=1 Tax=Cyanothece sp. PCC 8801
RepID=DAPF_CYAP8
Length = 281
Score = 94.4 bits (233), Expect(2) = 3e-24
Identities = 41/63 (65%), Positives = 49/63 (77%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F KY GLGNDFIL+DNR S P ++ EQA K+CDR+FG+GADGVIF +PG TDY M
Sbjct: 3 IEFSKYQGLGNDFILIDNRSSHTPLVSPEQAIKMCDRHFGIGADGVIFVLPGTANTDYTM 62
Query: 398 RIF 406
RIF
Sbjct: 63 RIF 65
Score = 41.2 bits (95), Expect(2) = 3e-24
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEP+MCGNG+RC
Sbjct: 65 FNSDGSEPQMCGNGIRC 81
[35][TOP]
>UniRef100_B8HU20 Diaminopimelate epimerase n=1 Tax=Cyanothece sp. PCC 7425
RepID=DAPF_CYAP4
Length = 280
Score = 92.4 bits (228), Expect(2) = 5e-24
Identities = 41/63 (65%), Positives = 48/63 (76%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
L F KY GLGNDFIL+DNR+ + P +T EQA +CDR+FGVGADGVIF +P TDY M
Sbjct: 3 LQFTKYQGLGNDFILIDNRNEATPLLTPEQAVDICDRHFGVGADGVIFLLPATGETDYTM 62
Query: 398 RIF 406
RIF
Sbjct: 63 RIF 65
Score = 42.4 bits (98), Expect(2) = 5e-24
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNG+RC
Sbjct: 65 FNSDGSEPEMCGNGIRC 81
[36][TOP]
>UniRef100_A3IPP9 Diaminopimelate epimerase n=1 Tax=Cyanothece sp. CCY0110
RepID=A3IPP9_9CHRO
Length = 286
Score = 93.2 bits (230), Expect(2) = 6e-24
Identities = 41/63 (65%), Positives = 51/63 (80%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F KY GLGNDFILVDNR ++ P ++ ++A KLCDR+FG+GADGVIFA+PG TDY M
Sbjct: 1 MEFTKYQGLGNDFILVDNRHNAIPLLSSKEAIKLCDRHFGIGADGVIFALPGDENTDYTM 60
Query: 398 RIF 406
RIF
Sbjct: 61 RIF 63
Score = 41.2 bits (95), Expect(2) = 6e-24
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEP+MCGNG+RC
Sbjct: 63 FNSDGSEPQMCGNGIRC 79
[37][TOP]
>UniRef100_A4RTF7 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4RTF7_OSTLU
Length = 407
Score = 90.5 bits (223), Expect(2) = 2e-23
Identities = 41/64 (64%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGT-DYA 394
+ F+KY GLGNDFIL+DNRDS+ K++ E AAK+CDRNFG+G DGVIFAMP + + DY+
Sbjct: 119 IDFIKYQGLGNDFILIDNRDSATVKMSSEAAAKMCDRNFGIGGDGVIFAMPPNDASEDYS 178
Query: 395 MRIF 406
MR+F
Sbjct: 179 MRMF 182
Score = 42.4 bits (98), Expect(2) = 2e-23
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNG+RC
Sbjct: 182 FNSDGSEPEMCGNGIRC 198
[38][TOP]
>UniRef100_Q01DU1 Homology to unknown gene n=1 Tax=Ostreococcus tauri
RepID=Q01DU1_OSTTA
Length = 327
Score = 90.5 bits (223), Expect(2) = 2e-23
Identities = 42/63 (66%), Positives = 50/63 (79%), Gaps = 2/63 (3%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGT--DYAM 397
F KY GLGNDF+L+DNR S +T EQAAK+CDRNFG+GADG+IFAMP GT DY+M
Sbjct: 37 FAKYQGLGNDFVLIDNRASDAVPVTAEQAAKMCDRNFGIGADGLIFAMPARPGTDEDYSM 96
Query: 398 RIF 406
R+F
Sbjct: 97 RMF 99
Score = 42.4 bits (98), Expect(2) = 2e-23
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNG+RC
Sbjct: 99 FNSDGSEPEMCGNGIRC 115
[39][TOP]
>UniRef100_B0C312 Diaminopimelate epimerase n=1 Tax=Acaryochloris marina MBIC11017
RepID=DAPF_ACAM1
Length = 283
Score = 90.5 bits (223), Expect(2) = 4e-23
Identities = 38/63 (60%), Positives = 49/63 (77%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F KY GLGNDFIL+DNR ++P +T +QA ++CDRNFG+G DGVIFA+P TDY M
Sbjct: 3 VEFTKYQGLGNDFILIDNRHQAQPCLTPDQAVQMCDRNFGIGGDGVIFALPPEGDTDYTM 62
Query: 398 RIF 406
RI+
Sbjct: 63 RIY 65
Score = 41.2 bits (95), Expect(2) = 4e-23
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
+NSDGSEPEMCGNG+RC
Sbjct: 65 YNSDGSEPEMCGNGIRC 81
[40][TOP]
>UniRef100_B8LBN1 Diaminopimelate epimerase n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8LBN1_THAPS
Length = 323
Score = 89.4 bits (220), Expect(2) = 8e-23
Identities = 42/94 (44%), Positives = 63/94 (67%)
Frame = +2
Query: 125 SLRVSAAASMDAVTAEKFSPASFLDKKETGVLHFVKYHGLGNDFILVDNRDSSEPKITQE 304
SL ++A++ A + + + ++ L+ K + F KY GLGNDFIL+D+RD P++T E
Sbjct: 8 SLLMAASSEAFATLSSQRTSSTSLNAKLGDSIEFAKYEGLGNDFILIDDRDRETPRLTPE 67
Query: 305 QAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRIF 406
Q+ +LC+RNFGVG DGVIFA+ D+ MRI+
Sbjct: 68 QSERLCNRNFGVGGDGVIFALKAPQDYDFTMRIY 101
Score = 41.2 bits (95), Expect(2) = 8e-23
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
+NSDGSEPEMCGNG+RC
Sbjct: 101 YNSDGSEPEMCGNGIRC 117
[41][TOP]
>UniRef100_A1KYM7 Diaminopimelate epimerase 2 n=1 Tax=cyanobacterium endosymbiont of
Rhopalodia gibba RepID=A1KYM7_9CYAN
Length = 279
Score = 92.4 bits (228), Expect(2) = 2e-22
Identities = 39/60 (65%), Positives = 49/60 (81%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRI 403
F KYHGLGND IL+ NR S+ P ++ EQ+ K+CDR+FG+GADGVIFA+PG+ TDY MRI
Sbjct: 5 FTKYHGLGNDLILIHNRLSNSPLVSPEQSVKMCDRHFGIGADGVIFALPGIGNTDYTMRI 64
Score = 37.0 bits (84), Expect(2) = 2e-22
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 408 NSDGSEPEMCGNGVRC 455
N DGSEP+MCGNG+RC
Sbjct: 66 NPDGSEPQMCGNGIRC 81
[42][TOP]
>UniRef100_C1E847 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E847_9CHLO
Length = 331
Score = 89.0 bits (219), Expect(2) = 2e-22
Identities = 42/64 (65%), Positives = 51/64 (79%), Gaps = 3/64 (4%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPG---VNGTDYA 394
F KY GLGNDF+LVDNRDSSE K++ E+ A+LCDRNFG+GADGVIFAMP DY+
Sbjct: 44 FYKYQGLGNDFVLVDNRDSSEIKLSSERCAQLCDRNFGIGADGVIFAMPPGLVQKDEDYS 103
Query: 395 MRIF 406
MR++
Sbjct: 104 MRMY 107
Score = 40.0 bits (92), Expect(2) = 2e-22
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
+NSDG+EPEMCGNG+RC
Sbjct: 107 YNSDGTEPEMCGNGIRC 123
[43][TOP]
>UniRef100_Q2JUV6 Diaminopimelate epimerase n=1 Tax=Synechococcus sp. JA-3-3Ab
RepID=DAPF_SYNJA
Length = 285
Score = 88.6 bits (218), Expect(2) = 5e-22
Identities = 40/63 (63%), Positives = 48/63 (76%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
L F KY GLGNDFILVDNR +P +T E+A LC+R FGVGADGVIF +PG G D++M
Sbjct: 5 LSFHKYQGLGNDFILVDNRHQPQPCLTPEEAVALCNRRFGVGADGVIFLLPGQEGADFSM 64
Query: 398 RIF 406
R+F
Sbjct: 65 RLF 67
Score = 39.3 bits (90), Expect(2) = 5e-22
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSE EMCGNG+RC
Sbjct: 67 FNSDGSEAEMCGNGIRC 83
[44][TOP]
>UniRef100_Q2JLR0 Diaminopimelate epimerase n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13)
RepID=DAPF_SYNJB
Length = 285
Score = 87.8 bits (216), Expect(2) = 9e-22
Identities = 40/63 (63%), Positives = 49/63 (77%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
L F KY GLGNDFILVDNR S+P ++ E+A LC+R FGVGADGVIF +PG G D++M
Sbjct: 5 LSFHKYQGLGNDFILVDNRWQSQPCLSPEEAVALCNRRFGVGADGVIFLLPGQEGADFSM 64
Query: 398 RIF 406
R+F
Sbjct: 65 RLF 67
Score = 39.3 bits (90), Expect(2) = 9e-22
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSE EMCGNG+RC
Sbjct: 67 FNSDGSEAEMCGNGIRC 83
[45][TOP]
>UniRef100_Q7NMF1 Diaminopimelate epimerase n=1 Tax=Gloeobacter violaceus
RepID=Q7NMF1_GLOVI
Length = 283
Score = 90.1 bits (222), Expect(2) = 2e-21
Identities = 39/65 (60%), Positives = 51/65 (78%)
Frame = +2
Query: 212 GVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDY 391
G L FVKY GLGNDF+L+DNR ++EP ++ E+AA +CDR+FGVGADGVIF + G D+
Sbjct: 6 GTLSFVKYEGLGNDFVLIDNRTAAEPVLSAEEAAAVCDRHFGVGADGVIFLLSAETGADF 65
Query: 392 AMRIF 406
MRI+
Sbjct: 66 RMRIY 70
Score = 35.8 bits (81), Expect(2) = 2e-21
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
+N+DGSE +MCGNG+RC
Sbjct: 70 YNNDGSEAQMCGNGIRC 86
[46][TOP]
>UniRef100_B7FV89 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
RepID=B7FV89_PHATR
Length = 334
Score = 83.6 bits (205), Expect(2) = 4e-21
Identities = 40/67 (59%), Positives = 50/67 (74%), Gaps = 6/67 (8%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAM--PGVNGT---- 385
F KYHGLGNDFIL+D+RD SEP +T E++A LC RNFG+G DGVIFA+ P +G
Sbjct: 46 FSKYHGLGNDFILIDDRDKSEPSLTPEESAMLCHRNFGIGGDGVIFALQPPSESGDGADF 105
Query: 386 DYAMRIF 406
D+ MRI+
Sbjct: 106 DFTMRIY 112
Score = 41.2 bits (95), Expect(2) = 4e-21
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
+NSDGSEPEMCGNG+RC
Sbjct: 112 YNSDGSEPEMCGNGIRC 128
[47][TOP]
>UniRef100_Q8DGM2 Diaminopimelate epimerase n=1 Tax=Thermosynechococcus elongatus
BP-1 RepID=DAPF_THEEB
Length = 286
Score = 79.7 bits (195), Expect(2) = 2e-17
Identities = 37/63 (58%), Positives = 45/63 (71%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
L F KY GLGNDF+L+DNR E +T EQA CDR+FGVGADGVIF + G +DY M
Sbjct: 3 LSFQKYQGLGNDFLLIDNRHQEELLLTPEQAQFWCDRHFGVGADGVIFLLRGTGESDYRM 62
Query: 398 RIF 406
R++
Sbjct: 63 RMY 65
Score = 33.1 bits (74), Expect(2) = 2e-17
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
+N+DGS +MCGNG+RC
Sbjct: 65 YNADGSVAQMCGNGIRC 81
[48][TOP]
>UniRef100_B4WKJ6 Diaminopimelate epimerase n=1 Tax=Synechococcus sp. PCC 7335
RepID=B4WKJ6_9SYNE
Length = 271
Score = 71.2 bits (173), Expect(2) = 2e-17
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = +2
Query: 263 VDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRIF 406
+DNR S P +T EQA +CDRNFG+GADGVIF +PG G DY+MRI+
Sbjct: 1 MDNRASETPMVTPEQAVDVCDRNFGIGADGVIFVLPGKEGADYSMRIY 48
Score = 41.2 bits (95), Expect(2) = 2e-17
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
+NSDGSEPEMCGNG+RC
Sbjct: 48 YNSDGSEPEMCGNGIRC 64
[49][TOP]
>UniRef100_A3YZK9 Diaminopimelate epimerase n=1 Tax=Synechococcus sp. WH 5701
RepID=A3YZK9_9SYNE
Length = 388
Score = 69.7 bits (169), Expect(2) = 5e-16
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPK----ITQEQAAKLCDRNFGVGADGVIFAMPGVNG 382
VL F KY GLGNDF+L+D R++++P+ + E+ +CDR FGVGADGVI A+P
Sbjct: 8 VLAFSKYQGLGNDFLLLDGREAADPQELFGLDPERVRWICDRRFGVGADGVILALPPEGD 67
Query: 383 TDYAMRIF 406
+ MRIF
Sbjct: 68 GELRMRIF 75
Score = 38.1 bits (87), Expect(2) = 5e-16
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE EMCGNG+RC
Sbjct: 75 FNADGSEAEMCGNGIRC 91
[50][TOP]
>UniRef100_A9BAE5 Diaminopimelate epimerase n=1 Tax=Prochlorococcus marinus str. MIT
9211 RepID=A9BAE5_PROM4
Length = 284
Score = 64.7 bits (156), Expect(2) = 8e-16
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 4/68 (5%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPK--ITQEQ--AAKLCDRNFGVGADGVIFAMPGVNG 382
++ F KYHGLGNDFI++D R S P ++ E+ LC R++G+G DG+I +P V G
Sbjct: 3 LIGFKKYHGLGNDFIIIDGRFSLLPSSIVSAEKHLVISLCKRHYGIGCDGIILILPPVAG 62
Query: 383 TDYAMRIF 406
D+ M+IF
Sbjct: 63 GDFRMKIF 70
Score = 42.4 bits (98), Expect(2) = 8e-16
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSEPEMCGNG+RC
Sbjct: 70 FNSDGSEPEMCGNGIRC 86
[51][TOP]
>UniRef100_A4CUI5 Diaminopimelate epimerase n=1 Tax=Synechococcus sp. WH 7805
RepID=A4CUI5_SYNPV
Length = 368
Score = 66.2 bits (160), Expect(2) = 5e-15
Identities = 36/68 (52%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPK-ITQEQA---AKLCDRNFGVGADGVIFAMPGVNG 382
+L F KY GLGNDFILV+ RD P+ IT A K+CDR FG+G DG+I A+P
Sbjct: 1 MLQFSKYQGLGNDFILVEGRDGRLPESITSPNADWVRKVCDRRFGLGGDGLILALPPQGQ 60
Query: 383 TDYAMRIF 406
D MRIF
Sbjct: 61 GDLRMRIF 68
Score = 38.1 bits (87), Expect(2) = 5e-15
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE EMCGNG+RC
Sbjct: 68 FNADGSEAEMCGNGIRC 84
[52][TOP]
>UniRef100_A5GT84 Diaminopimelate epimerase n=1 Tax=Synechococcus sp. RCC307
RepID=A5GT84_SYNR3
Length = 357
Score = 67.8 bits (164), Expect(2) = 8e-15
Identities = 31/60 (51%), Positives = 41/60 (68%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRI 403
F KY GLGNDFIL+D R + P++ + A +LCDR FG+G DG+I A+P G D M+I
Sbjct: 19 FRKYQGLGNDFILMDGRTTPLPEMGGDPAKELCDRRFGIGGDGLILALPPQQGGDVRMQI 78
Score = 35.8 bits (81), Expect(2) = 8e-15
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 408 NSDGSEPEMCGNGVRC 455
N+DGSE EMCGNG+RC
Sbjct: 80 NADGSEAEMCGNGIRC 95
[53][TOP]
>UniRef100_B5IJR7 Diaminopimelate epimerase n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5IJR7_9CHRO
Length = 394
Score = 62.0 bits (149), Expect(2) = 1e-14
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 19/83 (22%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPK-------------------ITQEQAAKLCDRNFG 337
+L + KY GLGNDF++VD R +++ +T E+ +LCDR FG
Sbjct: 1 MLQYCKYQGLGNDFLMVDGRGATDAATDVATEAATETPTDDTCLGLTPERIRRLCDRRFG 60
Query: 338 VGADGVIFAMPGVNGTDYAMRIF 406
+GADG+I A P G + MRIF
Sbjct: 61 IGADGLIVAAPPREGGELRMRIF 83
Score = 41.2 bits (95), Expect(2) = 1e-14
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSEPEMCGNG+RC
Sbjct: 83 FNADGSEPEMCGNGIRC 99
[54][TOP]
>UniRef100_Q0IAE7 Diaminopimelate epimerase n=1 Tax=Synechococcus sp. CC9311
RepID=Q0IAE7_SYNS3
Length = 380
Score = 62.8 bits (151), Expect(2) = 5e-14
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQEQ----AAKLCDRNFGVGADGVIFAMPGVNG 382
+L F KY GLGNDF+L++ R P E +LCDR FG+G DG+I A+P +G
Sbjct: 1 MLQFSKYQGLGNDFVLLEGRAGQLPLNIAEPDPNWVRQLCDRRFGIGGDGLILALPPEHG 60
Query: 383 TDYAMRIF 406
+ MRIF
Sbjct: 61 EELRMRIF 68
Score = 38.1 bits (87), Expect(2) = 5e-14
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE EMCGNG+RC
Sbjct: 68 FNADGSEAEMCGNGIRC 84
[55][TOP]
>UniRef100_A5GL73 Diaminopimelate epimerase n=1 Tax=Synechococcus sp. WH 7803
RepID=A5GL73_SYNPW
Length = 368
Score = 62.8 bits (151), Expect(2) = 5e-14
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDS--SEPKITQEQ--AAKLCDRNFGVGADGVIFAMPGVNG 382
+L F KY GLGNDFILV+ RD SE ++ + K+CDR FG+G DG+I A+P
Sbjct: 1 MLQFSKYQGLGNDFILVEGRDGRLSESIVSPDSDWVRKICDRRFGLGGDGLILALPPQGQ 60
Query: 383 TDYAMRIF 406
+ MRIF
Sbjct: 61 GELRMRIF 68
Score = 38.1 bits (87), Expect(2) = 5e-14
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE EMCGNG+RC
Sbjct: 68 FNADGSEAEMCGNGIRC 84
[56][TOP]
>UniRef100_Q7U6T2 Diaminopimelate epimerase n=1 Tax=Synechococcus sp. WH 8102
RepID=Q7U6T2_SYNPX
Length = 364
Score = 62.8 bits (151), Expect(2) = 5e-14
Identities = 31/68 (45%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQEQ----AAKLCDRNFGVGADGVIFAMPGVNG 382
+L F KY GLGNDF++++ R P+ E +LCDR FG+G DGVI A+P
Sbjct: 1 MLQFSKYQGLGNDFLILEGRQGQLPQSVVEPDPVWVRQLCDRRFGIGGDGVILALPPQGQ 60
Query: 383 TDYAMRIF 406
D MRIF
Sbjct: 61 GDLRMRIF 68
Score = 38.1 bits (87), Expect(2) = 5e-14
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE EMCGNG+RC
Sbjct: 68 FNADGSEAEMCGNGIRC 84
[57][TOP]
>UniRef100_A5D193 Diaminopimelate epimerase n=1 Tax=Pelotomaculum thermopropionicum
SI RepID=DAPF_PELTS
Length = 280
Score = 65.9 bits (159), Expect(2) = 5e-14
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDN-RDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYA 394
+HF K HGLGNDFILVD ++ P+ A K+CDR+FGVGADG++ +P + D +
Sbjct: 1 MHFTKAHGLGNDFILVDCFKEKVNPEDFPGLAVKMCDRHFGVGADGLVLLLPSPS-ADVS 59
Query: 395 MRIF 406
MRIF
Sbjct: 60 MRIF 63
Score = 35.0 bits (79), Expect(2) = 5e-14
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DGSE EMCGN +RC
Sbjct: 63 FNPDGSEAEMCGNAIRC 79
[58][TOP]
>UniRef100_Q05SY3 Diaminopimelate epimerase n=1 Tax=Synechococcus sp. RS9916
RepID=Q05SY3_9SYNE
Length = 372
Score = 62.4 bits (150), Expect(2) = 7e-14
Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSS-EPKITQ---EQAAKLCDRNFGVGADGVIFAMPGVNG 382
+L F KY GLGNDF+L++ RD + IT + ++CDR FGVG DG+I A+P
Sbjct: 1 MLQFSKYQGLGNDFVLIEGRDGRLDASITSPDPQWVRRICDRRFGVGGDGIILALPPEGP 60
Query: 383 TDYAMRIF 406
+ MRIF
Sbjct: 61 GELRMRIF 68
Score = 38.1 bits (87), Expect(2) = 7e-14
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE EMCGNG+RC
Sbjct: 68 FNADGSEAEMCGNGIRC 84
[59][TOP]
>UniRef100_A2C9T8 Diaminopimelate epimerase n=1 Tax=Prochlorococcus marinus str. MIT
9303 RepID=A2C9T8_PROM3
Length = 323
Score = 64.3 bits (155), Expect(2) = 1e-13
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 4/68 (5%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDS--SEPKITQEQA--AKLCDRNFGVGADGVIFAMPGVNG 382
+L F KY GLGNDF+L+D R+ S+ I + A K+CDR+FG+GADG+I A+P
Sbjct: 1 MLQFSKYQGLGNDFVLIDGREGQLSDQVINPDPAWVRKICDRHFGIGADGLILALPPRAD 60
Query: 383 TDYAMRIF 406
D M+IF
Sbjct: 61 GDLRMQIF 68
Score = 35.0 bits (79), Expect(2) = 1e-13
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGS EMCGNG+RC
Sbjct: 68 FNADGSLAEMCGNGIRC 84
[60][TOP]
>UniRef100_Q2RK34 Diaminopimelate epimerase n=1 Tax=Moorella thermoacetica ATCC 39073
RepID=DAPF_MOOTA
Length = 279
Score = 58.9 bits (141), Expect(2) = 1e-13
Identities = 29/63 (46%), Positives = 37/63 (58%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+HFVK HGLGNDF+LV+ P A ++C R FG+GADG+I +P M
Sbjct: 1 MHFVKMHGLGNDFVLVNAMTEKVPGDLPGLARRVCHRRFGIGADGLILVLPSEQAR-LRM 59
Query: 398 RIF 406
RIF
Sbjct: 60 RIF 62
Score = 40.4 bits (93), Expect(2) = 1e-13
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DGSEPEMCGNG+RC
Sbjct: 62 FNPDGSEPEMCGNGIRC 78
[61][TOP]
>UniRef100_C9R855 Diaminopimelate epimerase n=1 Tax=Ammonifex degensii KC4
RepID=C9R855_9THEO
Length = 279
Score = 62.8 bits (151), Expect(2) = 2e-13
Identities = 33/63 (52%), Positives = 42/63 (66%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+HFVK HGLGNDF++V R + P T E A K+C +FGVGADG++F +P D M
Sbjct: 1 MHFVKMHGLGNDFVVVMAR--TLPPDTPELARKVCRPHFGVGADGLVFILPS-EEADITM 57
Query: 398 RIF 406
RIF
Sbjct: 58 RIF 60
Score = 35.8 bits (81), Expect(2) = 2e-13
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE EMCGN +RC
Sbjct: 60 FNADGSEAEMCGNAIRC 76
[62][TOP]
>UniRef100_UPI0001745878 diaminopimelate epimerase n=1 Tax=Verrucomicrobium spinosum DSM
4136 RepID=UPI0001745878
Length = 274
Score = 63.2 bits (152), Expect(2) = 2e-13
Identities = 30/64 (46%), Positives = 44/64 (68%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYA 394
+L F K +G GNDF+++DNRD S +++ E A+LCDR+ GVGADG++ P G D+
Sbjct: 4 LLSFWKMNGAGNDFVMLDNRDLSL-QLSGESIAQLCDRHRGVGADGLLAVEPATEGGDFR 62
Query: 395 MRIF 406
MR +
Sbjct: 63 MRYY 66
Score = 35.4 bits (80), Expect(2) = 2e-13
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
++N+DG E EMCGNG RC
Sbjct: 65 YYNADGGEAEMCGNGARC 82
[63][TOP]
>UniRef100_B4CW33 Diaminopimelate epimerase n=1 Tax=Chthoniobacter flavus Ellin428
RepID=B4CW33_9BACT
Length = 267
Score = 63.2 bits (152), Expect(2) = 2e-13
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQEQA--AKLCDRNFGVGADGVIFAMPGVNGTD 388
+L F K +G GNDF+++DNRD K+T ++A A+LCDR+ GVGADGV+ P +G +
Sbjct: 1 MLTFTKMNGAGNDFVMLDNRDG---KLTLDKAQIARLCDRHRGVGADGVLVVEPAQSGAN 57
Query: 389 YAMRIF 406
+ MR +
Sbjct: 58 FRMRYY 63
Score = 35.4 bits (80), Expect(2) = 2e-13
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
++N+DG E EMCGNG RC
Sbjct: 62 YYNADGGEAEMCGNGARC 79
[64][TOP]
>UniRef100_A3Z6S8 Diaminopimelate epimerase n=1 Tax=Synechococcus sp. RS9917
RepID=A3Z6S8_9SYNE
Length = 360
Score = 60.1 bits (144), Expect(2) = 3e-13
Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSS-EPKITQEQAA---KLCDRNFGVGADGVIFAMPGVNG 382
+L F KY GLGNDFIL++ R I + A +LCDR FG+GADG+I A+P
Sbjct: 1 MLQFSKYQGLGNDFILLEGRSGQLSAAICEPDPAWVRRLCDRRFGIGADGLIVALPPAAA 60
Query: 383 TDYAMRIF 406
+ MRIF
Sbjct: 61 GELRMRIF 68
Score = 38.1 bits (87), Expect(2) = 3e-13
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE EMCGNG+RC
Sbjct: 68 FNADGSEAEMCGNGIRC 84
[65][TOP]
>UniRef100_Q7V7M5 Diaminopimelate epimerase n=1 Tax=Prochlorococcus marinus str. MIT
9313 RepID=DAPF_PROMM
Length = 303
Score = 63.2 bits (152), Expect(2) = 3e-13
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 7/71 (9%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQEQ-------AAKLCDRNFGVGADGVIFAMPG 373
+L F KY GLGNDF+L+D R E ++TQ+ K+CDR+FG+GADG+I A+P
Sbjct: 4 MLQFSKYQGLGNDFLLIDGR---EDQLTQQVINPDPAWVRKICDRHFGIGADGLILALPP 60
Query: 374 VNGTDYAMRIF 406
D M+IF
Sbjct: 61 RADGDLRMQIF 71
Score = 35.0 bits (79), Expect(2) = 3e-13
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGS EMCGNG+RC
Sbjct: 71 FNADGSLAEMCGNGIRC 87
[66][TOP]
>UniRef100_B9XSF9 Diaminopimelate epimerase n=1 Tax=bacterium Ellin514
RepID=B9XSF9_9BACT
Length = 269
Score = 60.5 bits (145), Expect(2) = 7e-13
Identities = 29/56 (51%), Positives = 40/56 (71%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNG 382
VL F K +G GNDF+LVDNR+ + K+ EQA +LC R G+GADG++ +P V+G
Sbjct: 2 VLEFNKMNGAGNDFVLVDNRER-KVKLRPEQAVQLCHRQRGIGADGIMLLVPCVSG 56
Score = 36.6 bits (83), Expect(2) = 7e-13
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
F+NSDGS EMCGNG RC
Sbjct: 64 FYNSDGSVAEMCGNGARC 81
[67][TOP]
>UniRef100_B1X3T5 Diaminopimelate epimerase n=1 Tax=Paulinella chromatophora
RepID=B1X3T5_PAUCH
Length = 376
Score = 60.8 bits (146), Expect(2) = 9e-13
Identities = 33/72 (45%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRD--------SSEPKITQEQAAKLCDRNFGVGADGVIFAMP 370
+L F KYHGLGNDF+++D R + +P E LCDR+FGVGADGVI +
Sbjct: 1 MLQFSKYHGLGNDFLIIDGRSWPANFMFANPDP----EWVRHLCDRHFGVGADGVIIILS 56
Query: 371 GVNGTDYAMRIF 406
D+ MRIF
Sbjct: 57 PTLEGDWRMRIF 68
Score = 35.8 bits (81), Expect(2) = 9e-13
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DG+E +MCGNG+RC
Sbjct: 68 FNADGTEAQMCGNGIRC 84
[68][TOP]
>UniRef100_A0B6C1 Diaminopimelate epimerase n=1 Tax=Methanosaeta thermophila PT
RepID=DAPF_METTP
Length = 279
Score = 61.6 bits (148), Expect(2) = 9e-13
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSE-PKITQEQAAK-LCDRNFGVGADGVIFAMPGVNGTDY 391
L FVK HG GNDFIL+D + P+ + +A++ LC RNFG+G DGV+F +P D
Sbjct: 4 LEFVKLHGNGNDFILIDELNGERIPEDEKSEASRILCHRNFGIGGDGVLFLVPS-ERADI 62
Query: 392 AMRIFQ 409
MR+FQ
Sbjct: 63 GMRLFQ 68
Score = 35.0 bits (79), Expect(2) = 9e-13
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
F DGSE EMCGNG+RC
Sbjct: 67 FQPDGSEAEMCGNGIRC 83
[69][TOP]
>UniRef100_C7PKR5 Diaminopimelate epimerase n=1 Tax=Chitinophaga pinensis DSM 2588
RepID=C7PKR5_CHIPD
Length = 261
Score = 64.7 bits (156), Expect(2) = 9e-13
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+HF KY G GNDF+++DNR+ +T+EQ LCDR FG+GADG++ + G D+ M
Sbjct: 4 IHFYKYQGTGNDFVIMDNRNGEYNFLTEEQVHFLCDRRFGIGADGLML-LNKQEGYDFGM 62
Query: 398 RIF 406
+ +
Sbjct: 63 KYY 65
Score = 32.0 bits (71), Expect(2) = 9e-13
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
++N+DG E MCGNG RC
Sbjct: 64 YYNADGRESSMCGNGGRC 81
[70][TOP]
>UniRef100_B1I545 Diaminopimelate epimerase n=1 Tax=Candidatus Desulforudis
audaxviator MP104C RepID=DAPF_DESAP
Length = 278
Score = 58.2 bits (139), Expect(2) = 1e-12
Identities = 27/63 (42%), Positives = 37/63 (58%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F K HGLGNDF++V+ S P A ++CDR GVGADG++ +P D M
Sbjct: 1 MEFTKMHGLGNDFVIVNGFGQSLPDDPGALARRVCDRRLGVGADGLVLLLPSA-AADLRM 59
Query: 398 RIF 406
R+F
Sbjct: 60 RVF 62
Score = 38.1 bits (87), Expect(2) = 1e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DGSEPEMCGN +RC
Sbjct: 62 FNPDGSEPEMCGNAIRC 78
[71][TOP]
>UniRef100_B2KDH2 Diaminopimelate epimerase n=1 Tax=Elusimicrobium minutum Pei191
RepID=DAPF_ELUMP
Length = 274
Score = 57.4 bits (137), Expect(2) = 1e-12
Identities = 33/64 (51%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAA--KLCDRNFGVGADGVIFAMPGVNGTDY 391
+ FVKY GLGNDFIL+D + KI A KLCDR+FG+GADG+I P + DY
Sbjct: 1 MEFVKYQGLGNDFILID---CVKIKIDGLNALGKKLCDRHFGIGADGLIAVFPSAS-ADY 56
Query: 392 AMRI 403
+RI
Sbjct: 57 KIRI 60
Score = 38.9 bits (89), Expect(2) = 1e-12
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 408 NSDGSEPEMCGNGVRC 455
NSDG+EPEMCGNG+RC
Sbjct: 62 NSDGTEPEMCGNGIRC 77
[72][TOP]
>UniRef100_Q3AXV6 Diaminopimelate epimerase n=1 Tax=Synechococcus sp. CC9902
RepID=Q3AXV6_SYNS9
Length = 355
Score = 58.9 bits (141), Expect(2) = 2e-12
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNR----DSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNG 382
+L F KY GLGNDF++++ R D + + ++CDR FGVG DGVI A+P
Sbjct: 1 MLQFSKYQGLGNDFLILEGRQGQLDFAVAEPDPNWVRRICDRRFGVGGDGVILALPPQAD 60
Query: 383 TDYAMRIF 406
D MRIF
Sbjct: 61 GDLRMRIF 68
Score = 37.0 bits (84), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DG+E EMCGNG+RC
Sbjct: 68 FNADGTEAEMCGNGIRC 84
[73][TOP]
>UniRef100_Q067B7 Diaminopimelate epimerase n=1 Tax=Synechococcus sp. BL107
RepID=Q067B7_9SYNE
Length = 354
Score = 58.9 bits (141), Expect(2) = 2e-12
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNR-DSSEPKITQEQ---AAKLCDRNFGVGADGVIFAMPGVNG 382
+L F KY GLGNDF++++ R D + I+ ++CDR FGVG DGVI A+P
Sbjct: 1 MLQFSKYQGLGNDFLILEGRQDQLDVAISDPDPNWVRRICDRRFGVGGDGVILALPPQAD 60
Query: 383 TDYAMRIF 406
D MRIF
Sbjct: 61 GDLRMRIF 68
Score = 37.0 bits (84), Expect(2) = 2e-12
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DG+E EMCGNG+RC
Sbjct: 68 FNADGTEAEMCGNGIRC 84
[74][TOP]
>UniRef100_UPI00006CD160 diaminopimelate epimerase family protein n=1 Tax=Tetrahymena
thermophila RepID=UPI00006CD160
Length = 310
Score = 63.5 bits (153), Expect(2) = 2e-12
Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 5/54 (9%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDS-----SEPKITQEQAAKLCDRNFGVGADGVIF 361
+LHF K+HGLGNDFI++DNR + P + AKLCDR+ G+GADGV+F
Sbjct: 2 ILHFDKFHGLGNDFIIIDNRQNLLNTCGNPDEFSKIIAKLCDRHLGIGADGVMF 55
Score = 32.3 bits (72), Expect(2) = 2e-12
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DG E ++CGNG+RC
Sbjct: 77 FNADGYESQICGNGLRC 93
[75][TOP]
>UniRef100_A7H7Y0 Diaminopimelate epimerase n=1 Tax=Anaeromyxobacter sp. Fw109-5
RepID=A7H7Y0_ANADF
Length = 266
Score = 61.2 bits (147), Expect(2) = 2e-12
Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAM-PGVNGTDYA 394
L FVKYHGLGNDFI+VD P + ++A +LCDR G+GADGV+ + P +G
Sbjct: 7 LSFVKYHGLGNDFIVVDG-----PLMDPDRARRLCDRRRGIGADGVLTVLPPRTSGAAAT 61
Query: 395 MRIF 406
M IF
Sbjct: 62 MHIF 65
Score = 34.7 bits (78), Expect(2) = 2e-12
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGS MCGNGVRC
Sbjct: 65 FNSDGSVAAMCGNGVRC 81
[76][TOP]
>UniRef100_A3UAS7 Diaminopimelate epimerase n=1 Tax=Croceibacter atlanticus HTCC2559
RepID=A3UAS7_9FLAO
Length = 261
Score = 60.8 bits (146), Expect(2) = 2e-12
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIF-AMPGVNGTDYA 394
+ F KY G GNDF+++DNR + K + LCDR FG+GADG+IF G+ G D+
Sbjct: 3 VEFYKYQGTGNDFVIIDNRRYNLSKNDTKTIKLLCDRRFGIGADGLIFLENSGIEGEDFK 62
Query: 395 MRIF 406
M F
Sbjct: 63 MVYF 66
Score = 34.7 bits (78), Expect(2) = 2e-12
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
+FNSDG+E MCGNG RC
Sbjct: 65 YFNSDGNESTMCGNGGRC 82
[77][TOP]
>UniRef100_UPI000185C6B4 diaminopimelate epimerase n=1 Tax=Capnocytophaga sputigena ATCC
33612 RepID=UPI000185C6B4
Length = 258
Score = 63.9 bits (154), Expect(2) = 2e-12
Identities = 28/66 (42%), Positives = 43/66 (65%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYA 394
+++F KY G GNDF+++DNR+ + PK ++ A LCDR FG+GADG+I N + Y
Sbjct: 1 MMNFYKYQGTGNDFVMIDNREGTFPKDNEKLIAHLCDRRFGIGADGLILL---ENDSQYD 57
Query: 395 MRIFQF 412
R+ +
Sbjct: 58 FRMVYY 63
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
++NSDG + MCGNG RC
Sbjct: 62 YYNSDGRQSTMCGNGGRC 79
[78][TOP]
>UniRef100_C2M7N1 Diaminopimelate epimerase n=1 Tax=Capnocytophaga gingivalis ATCC
33624 RepID=C2M7N1_CAPGI
Length = 353
Score = 63.5 bits (153), Expect(2) = 3e-12
Identities = 28/48 (58%), Positives = 36/48 (75%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVI 358
V+HF KY G GNDFIL+DNR ++ PK + A+LC+R FGVG DG+I
Sbjct: 88 VIHFYKYQGTGNDFILIDNRLNTFPKEDTKLVAQLCERRFGVGGDGLI 135
Score = 31.6 bits (70), Expect(2) = 3e-12
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
++NSDG+ MCGNG RC
Sbjct: 149 YYNSDGNPSSMCGNGGRC 166
[79][TOP]
>UniRef100_A6UTH4 Diaminopimelate epimerase n=1 Tax=Methanococcus aeolicus Nankai-3
RepID=DAPF_META3
Length = 295
Score = 55.8 bits (133), Expect(2) = 3e-12
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQ--EQAAKLCDRNFGVGADGVIFAMPGVNGT-D 388
L+F K HGLGND+I+++ D + K + E + K+C R F +GADGVIF P + D
Sbjct: 3 LNFTKMHGLGNDYIVINEFDGEKIKEDEKAEFSKKICKRGFSIGADGVIFVQPATDEKYD 62
Query: 389 YAMRIF 406
RIF
Sbjct: 63 IRFRIF 68
Score = 39.3 bits (90), Expect(2) = 3e-12
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSE EMCGNG+RC
Sbjct: 68 FNSDGSEAEMCGNGIRC 84
[80][TOP]
>UniRef100_A9DYX0 Diaminopimelate epimerase n=1 Tax=Kordia algicida OT-1
RepID=A9DYX0_9FLAO
Length = 269
Score = 62.8 bits (151), Expect(2) = 3e-12
Identities = 29/51 (56%), Positives = 34/51 (66%)
Frame = +2
Query: 206 ETGVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVI 358
E +L F KY G GNDF+LVDNR PK + KLCDR FG+GADG+I
Sbjct: 9 EEMILSFYKYQGTGNDFVLVDNRHDIFPKNNTKLIRKLCDRKFGIGADGLI 59
Score = 32.3 bits (72), Expect(2) = 3e-12
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
++N+DG+E MCGNG RC
Sbjct: 73 YYNADGNESTMCGNGGRC 90
[81][TOP]
>UniRef100_C5RXN2 Diaminopimelate epimerase (Fragment) n=1 Tax=Thermoanaerobacter sp.
X513 RepID=C5RXN2_9THEO
Length = 114
Score = 58.9 bits (141), Expect(2) = 3e-12
Identities = 30/63 (47%), Positives = 41/63 (65%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F K HGLGNDFI+++ R++ + E A KLCDR+FG+GADG++ P D M
Sbjct: 1 MKFTKMHGLGNDFIVIEARENVD---YSELAIKLCDRHFGIGADGLLVVEPS-GIADIRM 56
Query: 398 RIF 406
RIF
Sbjct: 57 RIF 59
Score = 36.2 bits (82), Expect(2) = 3e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE EMCGNG RC
Sbjct: 59 FNADGSEAEMCGNGSRC 75
[82][TOP]
>UniRef100_Q6AR62 Probable diaminopimelate epimerase n=1 Tax=Desulfotalea
psychrophila RepID=Q6AR62_DESPS
Length = 297
Score = 59.7 bits (143), Expect(2) = 3e-12
Identities = 29/57 (50%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +2
Query: 194 LDKKETGVLHFVKYHGLGNDFILVDNRDSS-EPKITQEQAAKLCDRNFGVGADGVIF 361
+D E G L F K G GNDFI +DNR+ + P I + AA +C R F VGADG+IF
Sbjct: 1 MDHMEKGALSFTKMSGAGNDFIFIDNREGAVPPAIRAKLAAHICPRMFSVGADGIIF 57
Score = 35.0 bits (79), Expect(2) = 3e-12
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
F+N+DGS EMCGNG RC
Sbjct: 70 FYNADGSLAEMCGNGARC 87
[83][TOP]
>UniRef100_Q24TW0 Putative uncharacterized protein n=1 Tax=Desulfitobacterium
hafniense Y51 RepID=Q24TW0_DESHY
Length = 287
Score = 54.7 bits (130), Expect(2) = 3e-12
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQ--EQAAKLCDRNFGVGADGVIFAMPGVNGTDY 391
+ VK HGLGNDF+ +D+ + ++ E A KLC R FGVG DG+I +P + D
Sbjct: 5 MEIVKMHGLGNDFVFIDHFQGAPAELPDYPELARKLCHRQFGVGGDGLIMVLPS-DKADA 63
Query: 392 AMRI 403
MRI
Sbjct: 64 RMRI 67
Score = 40.0 bits (92), Expect(2) = 3e-12
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +3
Query: 408 NSDGSEPEMCGNGVRC 455
NSDGSEPEMCGNG+RC
Sbjct: 69 NSDGSEPEMCGNGIRC 84
[84][TOP]
>UniRef100_C9LLL5 Diaminopimelate epimerase n=1 Tax=Dialister invisus DSM 15470
RepID=C9LLL5_9FIRM
Length = 283
Score = 58.2 bits (139), Expect(2) = 3e-12
Identities = 27/71 (38%), Positives = 43/71 (60%)
Frame = +2
Query: 194 LDKKETGVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPG 373
++ + G +HF K+ GNDF+ V N + + + ++ +C+RNFG+GADG+IF +P
Sbjct: 1 MNDMQEGFMHFTKWQACGNDFVFV-NAMTMDIRPVVKKCVSICNRNFGIGADGIIFVLPS 59
Query: 374 VNGTDYAMRIF 406
T MRIF
Sbjct: 60 EKAT-LQMRIF 69
Score = 36.6 bits (83), Expect(2) = 3e-12
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3
Query: 393 QCGFFNSDGSEPEMCGNGVR 452
Q FNSDGSE EMCGNG+R
Sbjct: 65 QMRIFNSDGSEAEMCGNGIR 84
[85][TOP]
>UniRef100_B8FSD4 Diaminopimelate epimerase n=1 Tax=Desulfitobacterium hafniense
DCB-2 RepID=DAPF_DESHD
Length = 283
Score = 54.7 bits (130), Expect(2) = 3e-12
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQ--EQAAKLCDRNFGVGADGVIFAMPGVNGTDY 391
+ VK HGLGNDF+ +D+ + ++ E A KLC R FGVG DG+I +P + D
Sbjct: 1 MEIVKMHGLGNDFVFIDHFQGAPAELPDYPELARKLCHRQFGVGGDGLIMVLPS-DKADA 59
Query: 392 AMRI 403
MRI
Sbjct: 60 RMRI 63
Score = 40.0 bits (92), Expect(2) = 3e-12
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +3
Query: 408 NSDGSEPEMCGNGVRC 455
NSDGSEPEMCGNG+RC
Sbjct: 65 NSDGSEPEMCGNGIRC 80
[86][TOP]
>UniRef100_B5YL43 Diaminopimelate epimerase n=1 Tax=Thermodesulfovibrio yellowstonii
DSM 11347 RepID=B5YL43_THEYD
Length = 279
Score = 57.0 bits (136), Expect(2) = 3e-12
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
++FVK HGLGNDFIL+D + PK QE A C+R FG+GAD ++ P D+ M
Sbjct: 4 INFVKMHGLGNDFILIDCLKNDLPK-PQEFAIHYCNRRFGIGADQLLLLYPS-QIADFKM 61
Query: 398 RIF 406
+IF
Sbjct: 62 KIF 64
Score = 37.7 bits (86), Expect(2) = 3e-12
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE EMCGNG+RC
Sbjct: 64 FNADGSEVEMCGNGIRC 80
[87][TOP]
>UniRef100_B2ULA2 Diaminopimelate epimerase n=1 Tax=Akkermansia muciniphila ATCC
BAA-835 RepID=B2ULA2_AKKM8
Length = 274
Score = 58.5 bits (140), Expect(2) = 3e-12
Identities = 28/53 (52%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRD-SSEPKITQEQAAKLCDRNFGVGADGVIFAMP 370
+LHF K G GNDF++VDNRD S + +E LCDR FG+GADG+I P
Sbjct: 2 LLHFYKMTGAGNDFVMVDNRDLSLSSVLDRETIEALCDRRFGIGADGLIAVEP 54
Score = 36.2 bits (82), Expect(2) = 3e-12
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 387 ITQCGFFNSDGSEPEMCGNGVRC 455
I + ++N+DG E EMCGNG RC
Sbjct: 61 IVRMRYYNADGGEAEMCGNGARC 83
[88][TOP]
>UniRef100_B4UCM0 Diaminopimelate epimerase n=1 Tax=Anaeromyxobacter sp. K
RepID=B4UCM0_ANASK
Length = 266
Score = 60.5 bits (145), Expect(2) = 3e-12
Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAM-PGVNGTDYA 394
L FVKYHGLGNDF++VD P + E+A ++CDR GVGADGV+ + P G
Sbjct: 7 LPFVKYHGLGNDFVVVDG-----PLMDAERARRICDRRRGVGADGVLTVLPPRTAGATAT 61
Query: 395 MRIF 406
M IF
Sbjct: 62 MHIF 65
Score = 34.3 bits (77), Expect(2) = 3e-12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGS MCGNG+RC
Sbjct: 65 FNSDGSVAAMCGNGIRC 81
[89][TOP]
>UniRef100_C6Q7F4 Diaminopimelate epimerase n=1 Tax=Thermoanaerobacter mathranii
subsp. mathranii str. A3 RepID=C6Q7F4_9THEO
Length = 274
Score = 58.2 bits (139), Expect(2) = 4e-12
Identities = 30/63 (47%), Positives = 41/63 (65%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F K HGLGNDFI+++ ++ + E AAKLCDR+FG+GADG++ P D M
Sbjct: 1 MKFTKMHGLGNDFIVIEALENVD---YSELAAKLCDRHFGIGADGLLVVEPS-GIADIRM 56
Query: 398 RIF 406
RIF
Sbjct: 57 RIF 59
Score = 36.2 bits (82), Expect(2) = 4e-12
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE EMCGNG RC
Sbjct: 59 FNADGSEAEMCGNGSRC 75
[90][TOP]
>UniRef100_Q26EQ0 Diaminopimelate epimerase n=1 Tax=Flavobacteria bacterium BBFL7
RepID=Q26EQ0_9BACT
Length = 260
Score = 60.8 bits (146), Expect(2) = 6e-12
Identities = 26/47 (55%), Positives = 33/47 (70%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVI 358
+HF KY G GNDF+++DNRD S K + LCDR FG+GADG+I
Sbjct: 4 IHFYKYQGTGNDFVMIDNRDLSFSKNDTKLIELLCDRKFGIGADGLI 50
Score = 33.1 bits (74), Expect(2) = 6e-12
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
+FN+DG E MCGNG RC
Sbjct: 64 YFNADGKESTMCGNGGRC 81
[91][TOP]
>UniRef100_Q7VBZ4 Diaminopimelate epimerase n=1 Tax=Prochlorococcus marinus
RepID=Q7VBZ4_PROMA
Length = 285
Score = 55.8 bits (133), Expect(2) = 1e-11
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNR-DSSEPKITQEQAA---KLCDRNFGVGADGVIFAMPGVNG 382
++ F KY GLGNDFI++D+R DS+ I + +C+R +GVGADG+I G
Sbjct: 3 IIKFNKYQGLGNDFIIIDDRKDSTVNNILTNDTSLVRNICNRKYGVGADGIILVQNSERG 62
Query: 383 TDYAMRIF 406
+ M+IF
Sbjct: 63 ANTKMQIF 70
Score = 37.4 bits (85), Expect(2) = 1e-11
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +3
Query: 390 TQCGFFNSDGSEPEMCGNGVRC 455
T+ FNSDGS EMCGNG+RC
Sbjct: 65 TKMQIFNSDGSIAEMCGNGIRC 86
[92][TOP]
>UniRef100_Q46L14 Diaminopimelate epimerase n=1 Tax=Prochlorococcus marinus str.
NATL2A RepID=DAPF_PROMT
Length = 284
Score = 52.0 bits (123), Expect(2) = 1e-11
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Frame = +2
Query: 221 HFVKYHGLGNDFILVDNRDSSEPKITQEQAAK----LCDRNFGVGADGVIFAMPGVNGTD 388
+F KY GLGNDFI+ D R ++ + + LC+RNFG+GADG+I + N
Sbjct: 4 NFSKYQGLGNDFIIFDARSNNLDHLFSKNKDNFIEHLCNRNFGIGADGIILILESNNKCF 63
Query: 389 YAMRIF 406
M+I+
Sbjct: 64 VRMKIY 69
Score = 41.2 bits (95), Expect(2) = 1e-11
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
+NSDGSEPEMCGNG+RC
Sbjct: 69 YNSDGSEPEMCGNGIRC 85
[93][TOP]
>UniRef100_A2C243 Diaminopimelate epimerase n=1 Tax=Prochlorococcus marinus str.
NATL1A RepID=DAPF_PROM1
Length = 284
Score = 52.0 bits (123), Expect(2) = 1e-11
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Frame = +2
Query: 221 HFVKYHGLGNDFILVDNRDSSEPKITQEQAAK----LCDRNFGVGADGVIFAMPGVNGTD 388
+F KY GLGNDFI+ D R ++ + + LC+RNFG+GADG+I + N
Sbjct: 4 NFSKYQGLGNDFIIFDARSNNLDHLFSKNKDNFIEHLCNRNFGIGADGIILILESNNKCF 63
Query: 389 YAMRIF 406
M+I+
Sbjct: 64 VRMKIY 69
Score = 41.2 bits (95), Expect(2) = 1e-11
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
+NSDGSEPEMCGNG+RC
Sbjct: 69 YNSDGSEPEMCGNGIRC 85
[94][TOP]
>UniRef100_UPI00016A58CE diaminopimelate epimerase n=1 Tax=Burkholderia ubonensis Bu
RepID=UPI00016A58CE
Length = 289
Score = 61.2 bits (147), Expect(2) = 1e-11
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D S+ P +T+ Q L +R+FGVGAD ++ P V+G D+
Sbjct: 3 LSFTKMHGAGNDFVVLDGYSSALPPLTEAQVRALANRHFGVGADQLLLVEKPTVDGADFK 62
Query: 395 MRIF 406
RIF
Sbjct: 63 YRIF 66
Score = 31.6 bits (70), Expect(2) = 1e-11
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 66 FNCDGGEVEHCGNGARC 82
[95][TOP]
>UniRef100_C8W080 Diaminopimelate epimerase n=1 Tax=Desulfotomaculum acetoxidans DSM
771 RepID=C8W080_9FIRM
Length = 277
Score = 55.1 bits (131), Expect(2) = 1e-11
Identities = 23/47 (48%), Positives = 33/47 (70%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVI 358
+HFVK HGLGNDF++V+ + P E A ++C R FG+GADG++
Sbjct: 1 MHFVKVHGLGNDFVVVNAMTETLPADLPELARRVCHRYFGIGADGLV 47
Score = 37.7 bits (86), Expect(2) = 1e-11
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 408 NSDGSEPEMCGNGVRC 455
NSDGSEPEMCGN +RC
Sbjct: 63 NSDGSEPEMCGNAIRC 78
[96][TOP]
>UniRef100_Q3AC09 Diaminopimelate epimerase n=1 Tax=Carboxydothermus hydrogenoformans
Z-2901 RepID=DAPF_CARHZ
Length = 274
Score = 58.2 bits (139), Expect(2) = 1e-11
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSE--PKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDY 391
+ F+K HGLGNDF++VD + K + A K+CDR FG+GADG++ +P D+
Sbjct: 1 MEFLKMHGLGNDFVVVDEIKNQNLVNKNLSDLAKKICDRRFGIGADGLVLLLPS-EKADF 59
Query: 392 AMRI 403
MRI
Sbjct: 60 KMRI 63
Score = 34.7 bits (78), Expect(2) = 1e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +3
Query: 408 NSDGSEPEMCGNGVRC 455
NSDGSE EMCGN +RC
Sbjct: 65 NSDGSEAEMCGNAIRC 80
[97][TOP]
>UniRef100_C6PLU7 Diaminopimelate epimerase n=1 Tax=Thermoanaerobacter italicus Ab9
RepID=C6PLU7_9THEO
Length = 274
Score = 56.6 bits (135), Expect(2) = 1e-11
Identities = 29/63 (46%), Positives = 40/63 (63%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F K HGLGNDFI+++ ++ + E A KLCDR+FG+GADG++ P D M
Sbjct: 1 MKFTKMHGLGNDFIVIEALENVD---YSELAVKLCDRHFGIGADGLLVVEPS-GIADIRM 56
Query: 398 RIF 406
RIF
Sbjct: 57 RIF 59
Score = 36.2 bits (82), Expect(2) = 1e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE EMCGNG RC
Sbjct: 59 FNADGSEAEMCGNGSRC 75
[98][TOP]
>UniRef100_Q8R9S4 Diaminopimelate epimerase n=1 Tax=Thermoanaerobacter tengcongensis
RepID=DAPF_THETN
Length = 274
Score = 56.6 bits (135), Expect(2) = 1e-11
Identities = 29/63 (46%), Positives = 40/63 (63%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F K HGLGNDFI+++ + + E A KLCDR+FG+GADG++ P + D M
Sbjct: 1 MRFTKMHGLGNDFIVIEAVEGVD---YSELAVKLCDRHFGIGADGLLVVEPS-HIADIKM 56
Query: 398 RIF 406
RIF
Sbjct: 57 RIF 59
Score = 36.2 bits (82), Expect(2) = 1e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE EMCGNG RC
Sbjct: 59 FNADGSEAEMCGNGSRC 75
[99][TOP]
>UniRef100_A4AQ09 Diaminopimelate epimerase n=1 Tax=Flavobacteriales bacterium
HTCC2170 RepID=A4AQ09_9FLAO
Length = 258
Score = 58.9 bits (141), Expect(2) = 1e-11
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVI 358
F KY G GNDF+++DNR PK A+LCDR FG+GADG+I
Sbjct: 5 FYKYQGTGNDFVMIDNRSKLFPKENINLIARLCDRRFGIGADGLI 49
Score = 33.9 bits (76), Expect(2) = 1e-11
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
+FNSDG++ MCGNG RC
Sbjct: 63 YFNSDGNQSSMCGNGGRC 80
[100][TOP]
>UniRef100_B0TGR9 Diaminopimelate epimerase n=1 Tax=Heliobacterium modesticaldum Ice1
RepID=DAPF_HELMI
Length = 281
Score = 52.4 bits (124), Expect(2) = 2e-11
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 5/56 (8%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKIT-----QEQAAKLCDRNFGVGADGVIFAMP 370
+ FVK HGLGNDFI+V+ + EP + +E A ++CDR++G+G DG+I P
Sbjct: 1 MEFVKMHGLGNDFIVVN---AMEPPLLDREDWEEIAVRICDRHYGIGGDGLILLFP 53
Score = 40.0 bits (92), Expect(2) = 2e-11
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +3
Query: 408 NSDGSEPEMCGNGVRC 455
NSDGSEPEMCGNG+RC
Sbjct: 65 NSDGSEPEMCGNGIRC 80
[101][TOP]
>UniRef100_B8JC32 Diaminopimelate epimerase n=1 Tax=Anaeromyxobacter dehalogenans
2CP-1 RepID=B8JC32_ANAD2
Length = 266
Score = 58.2 bits (139), Expect(2) = 2e-11
Identities = 31/64 (48%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAM-PGVNGTDYA 394
L FVKYHGLGNDF++VD P + +A ++CDR GVGADGV+ + P G
Sbjct: 7 LPFVKYHGLGNDFVVVDG-----PLMDAARARRICDRRRGVGADGVLTVLPPRTAGATAT 61
Query: 395 MRIF 406
M IF
Sbjct: 62 MHIF 65
Score = 34.3 bits (77), Expect(2) = 2e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGS MCGNG+RC
Sbjct: 65 FNSDGSVAAMCGNGIRC 81
[102][TOP]
>UniRef100_Q3AJV7 Diaminopimelate epimerase n=1 Tax=Synechococcus sp. CC9605
RepID=Q3AJV7_SYNSC
Length = 368
Score = 57.4 bits (137), Expect(2) = 2e-11
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQEQ----AAKLCDRNFGVGADGVIFAMPGVNG 382
+L F KY GLGNDF++V+ R P ++CDR FGVG DG+I A+P
Sbjct: 1 MLQFSKYQGLGNDFLIVEGRQGQLPDAISNPDPAWVRRICDRRFGVGGDGLILALPAQAD 60
Query: 383 TDYAMRI 403
+ MRI
Sbjct: 61 GELRMRI 67
Score = 34.7 bits (78), Expect(2) = 2e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +3
Query: 408 NSDGSEPEMCGNGVRC 455
N DGSE EMCGNG+RC
Sbjct: 69 NVDGSEAEMCGNGIRC 84
[103][TOP]
>UniRef100_D0CJ51 Diaminopimelate epimerase n=1 Tax=Synechococcus sp. WH 8109
RepID=D0CJ51_9SYNE
Length = 366
Score = 56.2 bits (134), Expect(2) = 2e-11
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQEQ----AAKLCDRNFGVGADGVIFAMPGVNG 382
+L F KY GLGNDF++++ R P + +++CDR FGVG DG+I A+P
Sbjct: 1 MLQFSKYQGLGNDFLILEGRQGQLPDSISDPDPAWVSRICDRRFGVGGDGLILALPPQAE 60
Query: 383 TDYAMRI 403
+ MRI
Sbjct: 61 GELRMRI 67
Score = 35.8 bits (81), Expect(2) = 2e-11
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 408 NSDGSEPEMCGNGVRC 455
N+DGSE EMCGNG+RC
Sbjct: 69 NADGSEAEMCGNGIRC 84
[104][TOP]
>UniRef100_Q2ING7 Diaminopimelate epimerase n=1 Tax=Anaeromyxobacter dehalogenans
2CP-C RepID=Q2ING7_ANADE
Length = 266
Score = 57.8 bits (138), Expect(2) = 2e-11
Identities = 31/64 (48%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAM-PGVNGTDYA 394
L FVKYHGLGNDF++VD P + +A ++CDR GVGADGV+ + P G
Sbjct: 7 LPFVKYHGLGNDFVVVDG-----PLMDAARARRICDRRRGVGADGVLTVLPPRTAGAAAT 61
Query: 395 MRIF 406
M IF
Sbjct: 62 MHIF 65
Score = 34.3 bits (77), Expect(2) = 2e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGS MCGNG+RC
Sbjct: 65 FNSDGSVAAMCGNGIRC 81
[105][TOP]
>UniRef100_A5FP09 Diaminopimelate epimerase n=1 Tax=Flavobacterium johnsoniae UW101
RepID=A5FP09_FLAJ1
Length = 260
Score = 59.3 bits (142), Expect(2) = 2e-11
Identities = 27/60 (45%), Positives = 39/60 (65%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F KY G GNDF+++DNR + PK + +LCDR FG+GADG+I + + TD+ M
Sbjct: 3 VEFYKYQGTGNDFVMIDNRSNFFPKEDVKLIERLCDRRFGIGADGLIL-LENDSETDFRM 61
Score = 32.7 bits (73), Expect(2) = 2e-11
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
++NSDG++ MCGNG RC
Sbjct: 63 YYNSDGNQSSMCGNGGRC 80
[106][TOP]
>UniRef100_A6ESV5 Diaminopimelate epimerase n=1 Tax=unidentified eubacterium SCB49
RepID=A6ESV5_9BACT
Length = 257
Score = 59.3 bits (142), Expect(2) = 2e-11
Identities = 25/46 (54%), Positives = 34/46 (73%)
Frame = +2
Query: 221 HFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVI 358
+F KY G GNDF+++DNR+ + PK + A +CDR FGVGADG+I
Sbjct: 4 NFYKYQGTGNDFVIIDNRELTFPKKDTKLIALMCDRKFGVGADGLI 49
Score = 32.7 bits (73), Expect(2) = 2e-11
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
++N+DG+E MCGNG RC
Sbjct: 63 YYNADGNESSMCGNGGRC 80
[107][TOP]
>UniRef100_C9LXX1 Diaminopimelate epimerase n=1 Tax=Selenomonas sputigena ATCC 35185
RepID=C9LXX1_9FIRM
Length = 279
Score = 54.7 bits (130), Expect(2) = 3e-11
Identities = 25/61 (40%), Positives = 37/61 (60%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRI 403
F K+ G GNDF+LV+ P + ++CDR++G+GADG+I +P D+ MRI
Sbjct: 5 FTKWQGCGNDFVLVNGFREQLPDDLAALSRRVCDRHYGIGADGLILVLPS-QQADFRMRI 63
Query: 404 F 406
F
Sbjct: 64 F 64
Score = 37.0 bits (84), Expect(2) = 3e-11
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DG+E EMCGNG+RC
Sbjct: 64 FNADGTEAEMCGNGIRC 80
[108][TOP]
>UniRef100_B8GJ70 Diaminopimelate epimerase n=1 Tax=Methanosphaerula palustris E1-9c
RepID=B8GJ70_METPE
Length = 277
Score = 59.7 bits (143), Expect(2) = 3e-11
Identities = 32/64 (50%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSSE--PKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
F K HG GNDF+L+D + + ++ E A CDR FGVGADGV+F G G D M
Sbjct: 10 FCKLHGNGNDFLLIDELEGTRIPDQMKGEFAELYCDRRFGVGADGVLFLSAGTEG-DLRM 68
Query: 398 RIFQ 409
RIFQ
Sbjct: 69 RIFQ 72
Score = 32.0 bits (71), Expect(2) = 3e-11
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
F D SE EMCGNG+RC
Sbjct: 71 FQPDRSEAEMCGNGIRC 87
[109][TOP]
>UniRef100_B0MU50 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM
17216 RepID=B0MU50_9BACT
Length = 270
Score = 58.5 bits (140), Expect(2) = 3e-11
Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVI-FAMPGVNGTDYA 394
+ F KY G GNDFIL+D R+ + E A+LCDR+FG+GADG++ A V+G D +
Sbjct: 3 MRFAKYEGAGNDFILLDLRNGGATPQSAE-IARLCDRHFGIGADGLMTLAASAVSGCDCS 61
Query: 395 MRIF 406
MR +
Sbjct: 62 MRYY 65
Score = 33.1 bits (74), Expect(2) = 3e-11
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
++N+DGS EMCGNG RC
Sbjct: 64 YYNADGSPGEMCGNGGRC 81
[110][TOP]
>UniRef100_A0LZ07 Diaminopimelate epimerase n=1 Tax=Gramella forsetii KT0803
RepID=A0LZ07_GRAFK
Length = 262
Score = 57.8 bits (138), Expect(2) = 3e-11
Identities = 25/47 (53%), Positives = 31/47 (65%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVI 358
L F KY G GNDF+++DNRD K + LCDR FG+GADG+I
Sbjct: 3 LKFYKYQGTGNDFVMIDNRDKEVSKNDTKLINHLCDRKFGIGADGLI 49
Score = 33.9 bits (76), Expect(2) = 3e-11
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
+FN+DG+E MCGNG RC
Sbjct: 65 YFNADGNESSMCGNGGRC 82
[111][TOP]
>UniRef100_C1UY59 Diaminopimelate epimerase n=1 Tax=Haliangium ochraceum DSM 14365
RepID=C1UY59_9DELT
Length = 326
Score = 55.1 bits (131), Expect(2) = 4e-11
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQ--------AAKLCDRNFGVGADGVIFAMPG 373
+ F KYHGLGNDF++VD RD T LC+R FG+GADG++ +P
Sbjct: 1 MRFGKYHGLGNDFLVVDLRDPEVAAGTGHAGEVPSPAVVRALCERRFGIGADGIMAVLPA 60
Query: 374 VNGTDYAMRI 403
+ D +R+
Sbjct: 61 LGDGDARLRV 70
Score = 36.2 bits (82), Expect(2) = 4e-11
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 408 NSDGSEPEMCGNGVRC 455
NSDGSE EMCGNG+RC
Sbjct: 72 NSDGSEAEMCGNGLRC 87
[112][TOP]
>UniRef100_A2W6M9 Diaminopimelate epimerase n=1 Tax=Burkholderia dolosa AUO158
RepID=A2W6M9_9BURK
Length = 311
Score = 59.7 bits (143), Expect(2) = 4e-11
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADG-VIFAMPGVNGTDYA 394
L F K HG GNDF+++D + P +TQ Q L +R+FG+GAD ++ P V+G D+
Sbjct: 25 LSFTKMHGAGNDFVVLDGYSRALPPLTQAQVRALANRHFGIGADQLLVVEKPTVDGADFK 84
Query: 395 MRIF 406
RIF
Sbjct: 85 YRIF 88
Score = 31.6 bits (70), Expect(2) = 4e-11
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 88 FNCDGGEVEHCGNGARC 104
[113][TOP]
>UniRef100_B2A663 Diaminopimelate epimerase n=1 Tax=Natranaerobius thermophilus
JW/NM-WN-LF RepID=DAPF_NATTJ
Length = 299
Score = 54.7 bits (130), Expect(2) = 4e-11
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVN---GTD 388
+ F K HGLGNDFIL+ + + P + A +LCDR FG+GADG++ N D
Sbjct: 1 MKFEKMHGLGNDFILMKDFQRNYPDL----AKRLCDRRFGIGADGLVIYSSCKNSNINAD 56
Query: 389 YAMRIF 406
Y MRI+
Sbjct: 57 YQMRIY 62
Score = 36.6 bits (83), Expect(2) = 4e-11
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3
Query: 393 QCGFFNSDGSEPEMCGNGVRC 455
Q +NSDGSE EMCGN +RC
Sbjct: 58 QMRIYNSDGSEAEMCGNAIRC 78
[114][TOP]
>UniRef100_Q7V1I3 Diaminopimelate epimerase n=1 Tax=Prochlorococcus marinus subsp.
pastoris str. CCMP1986 RepID=Q7V1I3_PROMP
Length = 286
Score = 54.3 bits (129), Expect(2) = 4e-11
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 7/55 (12%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDS-------SEPKITQEQAAKLCDRNFGVGADGVIFAM 367
F KYHG GNDFI++D+R+S S+ KI LCDR FG+G DGVIF +
Sbjct: 6 FEKYHGNGNDFIIIDSRNSNIYKKFLSDKKI---DIKNLCDRQFGIGGDGVIFIL 57
Score = 37.0 bits (84), Expect(2) = 4e-11
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
+NSDGSE +MCGNG+RC
Sbjct: 70 YNSDGSEAQMCGNGIRC 86
[115][TOP]
>UniRef100_UPI000178A218 diaminopimelate epimerase n=1 Tax=Geobacillus sp. Y412MC10
RepID=UPI000178A218
Length = 279
Score = 58.5 bits (140), Expect(2) = 4e-11
Identities = 28/63 (44%), Positives = 40/63 (63%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYA 394
++ F K HGLGNDF++V + P E A KLC+R FG+GADG+++ +P D+
Sbjct: 1 MMEFTKMHGLGNDFVVVYG-ERELPSDASELAVKLCNRFFGIGADGLVYILPSAK-ADFM 58
Query: 395 MRI 403
MRI
Sbjct: 59 MRI 61
Score = 32.7 bits (73), Expect(2) = 4e-11
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3
Query: 408 NSDGSEPEMCGNGVRC 455
NSDGSE E CGN +RC
Sbjct: 63 NSDGSEAEQCGNAIRC 78
[116][TOP]
>UniRef100_C9KKR6 Diaminopimelate epimerase n=1 Tax=Mitsuokella multacida DSM 20544
RepID=C9KKR6_9FIRM
Length = 278
Score = 53.1 bits (126), Expect(2) = 4e-11
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F K+ G GNDF+LVD + A K+CDR++G+G DGV++ +P + D+ M
Sbjct: 1 MRFSKWQGCGNDFVLVDCFKENVSDFAAF-AKKVCDRHYGIGGDGVLYVLPS-DKADFRM 58
Query: 398 RIF 406
RIF
Sbjct: 59 RIF 61
Score = 38.1 bits (87), Expect(2) = 4e-11
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE EMCGNG+RC
Sbjct: 61 FNTDGSEAEMCGNGIRC 77
[117][TOP]
>UniRef100_C7P6F3 Diaminopimelate epimerase n=1 Tax=Methanocaldococcus fervens AG86
RepID=C7P6F3_METFA
Length = 297
Score = 51.6 bits (122), Expect(2) = 5e-11
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQ--AAKLCDRNFGVGADGVIFAM-PGVNGTD 388
+ F K H LGND+I+++ D + K ++ A K+C R F VGADGVIF P + D
Sbjct: 3 MEFTKMHALGNDYIVINEFDGEKVKEEEKSYFAKKICRRGFSVGADGVIFVQKPTSDEYD 62
Query: 389 YAMRIF 406
RIF
Sbjct: 63 VRFRIF 68
Score = 39.3 bits (90), Expect(2) = 5e-11
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSE EMCGNG+RC
Sbjct: 68 FNSDGSEAEMCGNGIRC 84
[118][TOP]
>UniRef100_UPI00016A9702 diaminopimelate epimerase n=1 Tax=Burkholderia oklahomensis C6786
RepID=UPI00016A9702
Length = 293
Score = 59.3 bits (142), Expect(2) = 5e-11
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D + P +T Q L DR+FG+GAD ++ P V G D+
Sbjct: 3 LSFTKMHGAGNDFVVLDGYTRALPALTDAQVRALADRHFGIGADQLLLVEKPTVEGADFK 62
Query: 395 MRIF 406
RIF
Sbjct: 63 YRIF 66
Score = 31.6 bits (70), Expect(2) = 5e-11
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 66 FNCDGGEVEHCGNGARC 82
[119][TOP]
>UniRef100_UPI00016A2AAF diaminopimelate epimerase n=1 Tax=Burkholderia oklahomensis EO147
RepID=UPI00016A2AAF
Length = 293
Score = 59.3 bits (142), Expect(2) = 5e-11
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D + P +T Q L DR+FG+GAD ++ P V G D+
Sbjct: 3 LSFTKMHGAGNDFVVLDGYTRALPALTDAQVRALADRHFGIGADQLLLVEKPTVEGADFK 62
Query: 395 MRIF 406
RIF
Sbjct: 63 YRIF 66
Score = 31.6 bits (70), Expect(2) = 5e-11
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 66 FNCDGGEVEHCGNGARC 82
[120][TOP]
>UniRef100_UPI00016AEFDF diaminopimelate epimerase n=1 Tax=Burkholderia thailandensis MSMB43
RepID=UPI00016AEFDF
Length = 289
Score = 59.3 bits (142), Expect(2) = 5e-11
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D + P +T Q L DR+FG+GAD ++ P V+G D+
Sbjct: 3 LSFTKMHGAGNDFVVLDGYSRALPPLTGAQVRALADRHFGIGADQLLLVEKPTVDGADFK 62
Query: 395 MRIF 406
RIF
Sbjct: 63 YRIF 66
Score = 31.6 bits (70), Expect(2) = 5e-11
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 66 FNCDGGEVEHCGNGARC 82
[121][TOP]
>UniRef100_A4JIQ6 Diaminopimelate epimerase n=1 Tax=Burkholderia vietnamiensis G4
RepID=DAPF_BURVG
Length = 289
Score = 59.3 bits (142), Expect(2) = 5e-11
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADG-VIFAMPGVNGTDYA 394
L F K HG GNDF+++D + P +T Q L DR+FG+GAD ++ P V+G D+
Sbjct: 3 LSFTKMHGAGNDFVVLDGYSHTLPPLTDVQVRALADRHFGIGADQLLVVEKPTVDGADFK 62
Query: 395 MRIF 406
RIF
Sbjct: 63 YRIF 66
Score = 31.6 bits (70), Expect(2) = 5e-11
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 66 FNCDGGEVEHCGNGARC 82
[122][TOP]
>UniRef100_O27389 Diaminopimelate epimerase n=1 Tax=Methanothermobacter
thermautotrophicus str. Delta H RepID=DAPF_METTH
Length = 286
Score = 52.8 bits (125), Expect(2) = 5e-11
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSSEPKITQEQ----AAKLCDRNFGVGADGVIFAMPGVNGTDY 391
F K HGLGND++++D +S++ I +++ ++C R F VGADGVIF P D
Sbjct: 4 FSKMHGLGNDYVVID--ESAQECIPEDKKPEFVREVCTRGFSVGADGVIFVQPASGEGDI 61
Query: 392 AMRIF 406
RIF
Sbjct: 62 RFRIF 66
Score = 38.1 bits (87), Expect(2) = 5e-11
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE EMCGNG+RC
Sbjct: 66 FNADGSEAEMCGNGIRC 82
[123][TOP]
>UniRef100_Q8F9V5 Diaminopimelate epimerase n=1 Tax=Leptospira interrogans
RepID=DAPF_LEPIN
Length = 281
Score = 54.7 bits (130), Expect(2) = 5e-11
Identities = 26/63 (41%), Positives = 41/63 (65%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
L F K G+GND++ +D+ ++ ++T EQ K+ DRNFG+G+DGVIF G D+ M
Sbjct: 4 LKFTKMEGIGNDYVYIDST-RNDIRLTPEQIQKISDRNFGIGSDGVIFIRNSKQG-DFMM 61
Query: 398 RIF 406
++
Sbjct: 62 DMY 64
Score = 36.2 bits (82), Expect(2) = 5e-11
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
+NSDGS EMCGNG+RC
Sbjct: 64 YNSDGSSSEMCGNGIRC 80
[124][TOP]
>UniRef100_Q72W63 Diaminopimelate epimerase n=1 Tax=Leptospira interrogans serovar
Copenhageni RepID=DAPF_LEPIC
Length = 281
Score = 54.7 bits (130), Expect(2) = 5e-11
Identities = 26/63 (41%), Positives = 41/63 (65%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
L F K G+GND++ +D+ ++ ++T EQ K+ DRNFG+G+DGVIF G D+ M
Sbjct: 4 LKFTKMEGIGNDYVYIDST-RNDIRLTPEQIQKISDRNFGIGSDGVIFIRNSKQG-DFMM 61
Query: 398 RIF 406
++
Sbjct: 62 DMY 64
Score = 36.2 bits (82), Expect(2) = 5e-11
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
+NSDGS EMCGNG+RC
Sbjct: 64 YNSDGSSSEMCGNGIRC 80
[125][TOP]
>UniRef100_Q0W3B6 Diaminopimelate epimerase n=1 Tax=uncultured methanogenic archaeon
RC-I RepID=DAPF_UNCMA
Length = 280
Score = 53.1 bits (126), Expect(2) = 5e-11
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQ-AAKLCDRNFGVGADGVIFAMPGVNGTDYA 394
+ F K HG GNDFI++D ++ P+ + A K+C R FG+GADGV+F ++ T
Sbjct: 4 IKFTKMHGNGNDFIVIDEFENPVPEEKKAAFAKKVCHRRFGIGADGVLFLAKPLH-TSLH 62
Query: 395 MRIF 406
MRIF
Sbjct: 63 MRIF 66
Score = 37.7 bits (86), Expect(2) = 5e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DGSE EMCGNG+RC
Sbjct: 66 FNEDGSEAEMCGNGIRC 82
[126][TOP]
>UniRef100_A1HMY7 Diaminopimelate epimerase n=1 Tax=Thermosinus carboxydivorans Nor1
RepID=A1HMY7_9FIRM
Length = 279
Score = 56.2 bits (134), Expect(2) = 5e-11
Identities = 27/63 (42%), Positives = 38/63 (60%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F K+HG GNDF++V+ Q A K+CDR+FG+GADG++ P D+ M
Sbjct: 1 MQFTKWHGQGNDFVIVNGFQEKIEDYAQA-AVKICDRHFGIGADGLVIVGPS-QVADFRM 58
Query: 398 RIF 406
RIF
Sbjct: 59 RIF 61
Score = 34.7 bits (78), Expect(2) = 5e-11
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSE EMCGN RC
Sbjct: 61 FNSDGSEAEMCGNVTRC 77
[127][TOP]
>UniRef100_C4V4G3 Diaminopimelate epimerase n=1 Tax=Selenomonas flueggei ATCC 43531
RepID=C4V4G3_9FIRM
Length = 279
Score = 51.6 bits (122), Expect(2) = 5e-11
Identities = 29/63 (46%), Positives = 38/63 (60%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F K+ G GNDF++VD D EP A ++CDR+FGVGADG++ A P D M
Sbjct: 1 MKFSKWQGCGNDFVIVDFLDH-EPVDFAVLAREMCDRHFGVGADGLMAACPS-ETADVRM 58
Query: 398 RIF 406
R F
Sbjct: 59 REF 61
Score = 39.3 bits (90), Expect(2) = 5e-11
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG+EPEMCGNG+RC
Sbjct: 61 FNPDGTEPEMCGNGIRC 77
[128][TOP]
>UniRef100_A6EAU6 Diaminopimelate epimerase n=1 Tax=Pedobacter sp. BAL39
RepID=A6EAU6_9SPHI
Length = 270
Score = 60.8 bits (146), Expect(2) = 5e-11
Identities = 30/71 (42%), Positives = 40/71 (56%)
Frame = +2
Query: 200 KKETGVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVN 379
+KE +HF KY G GNDFIL+DNRD S +LC+R FG+GADG++ +
Sbjct: 6 QKEDMKIHFYKYQGAGNDFILIDNRDLSFKYTGNNAVLQLCNRRFGIGADGLMLLQ---D 62
Query: 380 GTDYAMRIFQF 412
DY + F
Sbjct: 63 HADYDFEMLYF 73
Score = 30.0 bits (66), Expect(2) = 5e-11
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
+FN+DG MCGNG RC
Sbjct: 72 YFNADGKLGSMCGNGGRC 89
[129][TOP]
>UniRef100_B0K299 Diaminopimelate epimerase n=5 Tax=Thermoanaerobacter
RepID=B0K299_THEPX
Length = 269
Score = 54.7 bits (130), Expect(2) = 5e-11
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = +2
Query: 236 HGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRIF 406
HGLGNDFI+++ R++ + E A KLCDR+FG+GADG++ P D MRIF
Sbjct: 2 HGLGNDFIVIEARENVD---YSELAIKLCDRHFGIGADGLLVVEPS-GIADIRMRIF 54
Score = 36.2 bits (82), Expect(2) = 5e-11
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE EMCGNG RC
Sbjct: 54 FNADGSEAEMCGNGSRC 70
[130][TOP]
>UniRef100_C7M779 Diaminopimelate epimerase n=1 Tax=Capnocytophaga ochracea DSM 7271
RepID=C7M779_CAPOD
Length = 264
Score = 58.2 bits (139), Expect(2) = 5e-11
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVI 358
++ F KY G GNDF+++DNR PK + A+LC R FG+GADG+I
Sbjct: 1 MMKFYKYQGTGNDFVMIDNRKGVFPKNNETLVAQLCHRRFGIGADGLI 48
Score = 32.7 bits (73), Expect(2) = 5e-11
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
++NSDG E MCGNG RC
Sbjct: 62 YYNSDGRESTMCGNGGRC 79
[131][TOP]
>UniRef100_C6XYG7 Diaminopimelate epimerase n=1 Tax=Pedobacter heparinus DSM 2366
RepID=C6XYG7_PEDHD
Length = 261
Score = 59.3 bits (142), Expect(2) = 5e-11
Identities = 26/48 (54%), Positives = 32/48 (66%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIF 361
+HF KY G GNDFIL+D+ S I E K+CDR FGVG DG++F
Sbjct: 3 IHFFKYQGAGNDFILIDHSASPIKDIDYEWVKKICDRRFGVGGDGLMF 50
Score = 31.6 bits (70), Expect(2) = 5e-11
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
+FNSDG MCGNG RC
Sbjct: 63 YFNSDGRPGSMCGNGGRC 80
[132][TOP]
>UniRef100_A1ZUT8 Diaminopimelate epimerase n=1 Tax=Microscilla marina ATCC 23134
RepID=A1ZUT8_9SPHI
Length = 258
Score = 59.7 bits (143), Expect(2) = 5e-11
Identities = 28/61 (45%), Positives = 38/61 (62%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRI 403
F KY G GNDF+++D+R + P E A+LCDR FG+GADG+I + G D+ M
Sbjct: 5 FYKYQGTGNDFVMIDDRAAQFPIDNYELIARLCDRRFGIGADGLIL-LRNAEGYDFRMVY 63
Query: 404 F 406
F
Sbjct: 64 F 64
Score = 31.2 bits (69), Expect(2) = 5e-11
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
+FN++G E MCGNG RC
Sbjct: 63 YFNANGKEGSMCGNGGRC 80
[133][TOP]
>UniRef100_A9A044 Diaminopimelate epimerase n=1 Tax=Desulfococcus oleovorans Hxd3
RepID=A9A044_DESOH
Length = 310
Score = 63.5 bits (153), Expect(2) = 6e-11
Identities = 27/65 (41%), Positives = 45/65 (69%)
Frame = +2
Query: 212 GVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDY 391
G + F KYHGLGND+I++D D+ E ++ +Q ++C RN+G+G+DG++F + D+
Sbjct: 24 GQVQFHKYHGLGNDYIVIDPADAGEV-LSADQVRRICHRNYGMGSDGILFGPFAGSRGDF 82
Query: 392 AMRIF 406
+RIF
Sbjct: 83 GLRIF 87
Score = 26.9 bits (58), Expect(2) = 6e-11
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVR 452
FN DGSE E GNG+R
Sbjct: 87 FNPDGSEAEKSGNGLR 102
[134][TOP]
>UniRef100_Q39BY7 Diaminopimelate epimerase n=1 Tax=Burkholderia sp. 383
RepID=Q39BY7_BURS3
Length = 309
Score = 58.9 bits (141), Expect(2) = 6e-11
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D + P +T+ Q L +R+FG+GAD ++ P V+G D+
Sbjct: 23 LSFTKMHGAGNDFVVLDGYSRALPPLTEAQVRALANRHFGIGADQLLLVEKPTVDGVDFK 82
Query: 395 MRIF 406
RIF
Sbjct: 83 YRIF 86
Score = 31.6 bits (70), Expect(2) = 6e-11
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 86 FNCDGGEVEHCGNGARC 102
[135][TOP]
>UniRef100_B1K0F5 Diaminopimelate epimerase n=1 Tax=Burkholderia cenocepacia MC0-3
RepID=B1K0F5_BURCC
Length = 309
Score = 58.9 bits (141), Expect(2) = 6e-11
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D + P +T+ Q L +R+FG+GAD ++ P V+G D+
Sbjct: 23 LSFTKMHGAGNDFVVLDGYSRALPPLTEAQVRALANRHFGIGADQLLLVEKPTVDGADFK 82
Query: 395 MRIF 406
RIF
Sbjct: 83 YRIF 86
Score = 31.6 bits (70), Expect(2) = 6e-11
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 86 FNCDGGEVEHCGNGARC 102
[136][TOP]
>UniRef100_A0KBF6 Diaminopimelate epimerase n=2 Tax=Burkholderia cenocepacia
RepID=A0KBF6_BURCH
Length = 309
Score = 58.9 bits (141), Expect(2) = 6e-11
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D + P +T+ Q L +R+FG+GAD ++ P V+G D+
Sbjct: 23 LSFTKMHGAGNDFVVLDGYSRALPPLTEAQVRALANRHFGIGADQLLLVEKPTVDGADFK 82
Query: 395 MRIF 406
RIF
Sbjct: 83 YRIF 86
Score = 31.6 bits (70), Expect(2) = 6e-11
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 86 FNCDGGEVEHCGNGARC 102
[137][TOP]
>UniRef100_A2VUK2 Diaminopimelate epimerase n=1 Tax=Burkholderia cenocepacia PC184
RepID=A2VUK2_9BURK
Length = 309
Score = 58.9 bits (141), Expect(2) = 6e-11
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D + P +T+ Q L +R+FG+GAD ++ P V+G D+
Sbjct: 23 LSFTKMHGAGNDFVVLDGYSRALPPLTEAQVRALANRHFGIGADQLLLVEKPTVDGADFK 82
Query: 395 MRIF 406
RIF
Sbjct: 83 YRIF 86
Score = 31.6 bits (70), Expect(2) = 6e-11
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 86 FNCDGGEVEHCGNGARC 102
[138][TOP]
>UniRef100_C4RIV3 Diaminopimelate epimerase n=1 Tax=Micromonospora sp. ATCC 39149
RepID=C4RIV3_9ACTO
Length = 306
Score = 60.8 bits (146), Expect(2) = 6e-11
Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = +2
Query: 221 HFVKYHGLGNDFILVDNRDSS-EPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
HF KY LGND++++D RD + EP T + A LCDRNFG+GADGV++ G G +A
Sbjct: 3 HFTKYQALGNDYVVIDPRDVAFEP--TGQDALLLCDRNFGIGADGVLY---GPIGPVHAS 57
Query: 398 RIFQFR 415
R Q R
Sbjct: 58 RPVQLR 63
Score = 29.6 bits (65), Expect(2) = 6e-11
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 393 QCGFFNSDGSEPEMCGNGVR 452
Q FNSDGSE E GNG+R
Sbjct: 61 QLRIFNSDGSECEKSGNGIR 80
[139][TOP]
>UniRef100_C9RGT5 Diaminopimelate epimerase n=1 Tax=Methanocaldococcus vulcanius M7
RepID=C9RGT5_9EURY
Length = 295
Score = 51.2 bits (121), Expect(2) = 6e-11
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQ--AAKLCDRNFGVGADGVIFAM-PGVNGTD 388
+ F K H LGND+I+++ D + K +++ + K+C R F VGADGVIF P + D
Sbjct: 1 MEFTKMHALGNDYIVINEFDGEKIKENEKKNFSKKICRRGFSVGADGVIFIQKPTSDNFD 60
Query: 389 YAMRIF 406
RIF
Sbjct: 61 VRFRIF 66
Score = 39.3 bits (90), Expect(2) = 6e-11
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSE EMCGNG+RC
Sbjct: 66 FNSDGSEAEMCGNGIRC 82
[140][TOP]
>UniRef100_B1FII7 Diaminopimelate epimerase n=1 Tax=Burkholderia ambifaria IOP40-10
RepID=B1FII7_9BURK
Length = 294
Score = 58.9 bits (141), Expect(2) = 6e-11
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D + P +T+ Q L +R+FG+GAD ++ P V+G D+
Sbjct: 3 LSFTKMHGAGNDFVVLDGYSRALPPLTEAQVRALANRHFGIGADQLLLVEKPTVDGADFK 62
Query: 395 MRIF 406
RIF
Sbjct: 63 YRIF 66
Score = 31.6 bits (70), Expect(2) = 6e-11
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 66 FNCDGGEVEHCGNGARC 82
[141][TOP]
>UniRef100_UPI00003A812E diaminopimelate epimerase n=1 Tax=Burkholderia sp. 383
RepID=UPI00003A812E
Length = 289
Score = 58.9 bits (141), Expect(2) = 6e-11
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D + P +T+ Q L +R+FG+GAD ++ P V+G D+
Sbjct: 3 LSFTKMHGAGNDFVVLDGYSRALPPLTEAQVRALANRHFGIGADQLLLVEKPTVDGVDFK 62
Query: 395 MRIF 406
RIF
Sbjct: 63 YRIF 66
Score = 31.6 bits (70), Expect(2) = 6e-11
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 66 FNCDGGEVEHCGNGARC 82
[142][TOP]
>UniRef100_A8KK52 Diaminopimelate epimerase n=1 Tax=Burkholderia pseudomallei Pasteur
52237 RepID=A8KK52_BURPS
Length = 289
Score = 58.9 bits (141), Expect(2) = 6e-11
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D + P +T Q L DR+FG+GAD ++ P V+G D+
Sbjct: 3 LSFTKMHGAGNDFVVLDGYTRALPPLTGAQVRALADRHFGIGADQLLLVEKPTVDGADFK 62
Query: 395 MRIF 406
RIF
Sbjct: 63 YRIF 66
Score = 31.6 bits (70), Expect(2) = 6e-11
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 66 FNCDGGEVEHCGNGARC 82
[143][TOP]
>UniRef100_A8E8B9 Diaminopimelate epimerase n=1 Tax=Burkholderia pseudomallei 406e
RepID=A8E8B9_BURPS
Length = 289
Score = 58.9 bits (141), Expect(2) = 6e-11
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D + P +T Q L DR+FG+GAD ++ P V+G D+
Sbjct: 3 LSFTKMHGAGNDFVVLDGYTRALPPLTGAQVRALADRHFGIGADQLLLVEKPTVDGADFK 62
Query: 395 MRIF 406
RIF
Sbjct: 63 YRIF 66
Score = 31.6 bits (70), Expect(2) = 6e-11
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 66 FNCDGGEVEHCGNGARC 82
[144][TOP]
>UniRef100_Q63YH7 Diaminopimelate epimerase n=2 Tax=Burkholderia pseudomallei
RepID=DAPF_BURPS
Length = 289
Score = 58.9 bits (141), Expect(2) = 6e-11
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D + P +T Q L DR+FG+GAD ++ P V+G D+
Sbjct: 3 LSFTKMHGAGNDFVVLDGYTRALPPLTGAQVRALADRHFGIGADQLLLVEKPTVDGADFK 62
Query: 395 MRIF 406
RIF
Sbjct: 63 YRIF 66
Score = 31.6 bits (70), Expect(2) = 6e-11
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 66 FNCDGGEVEHCGNGARC 82
[145][TOP]
>UniRef100_A3N4H9 Diaminopimelate epimerase n=1 Tax=Burkholderia pseudomallei 668
RepID=DAPF_BURP6
Length = 289
Score = 58.9 bits (141), Expect(2) = 6e-11
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D + P +T Q L DR+FG+GAD ++ P V+G D+
Sbjct: 3 LSFTKMHGAGNDFVVLDGYTRALPPLTGAQVRALADRHFGIGADQLLLVEKPTVDGADFK 62
Query: 395 MRIF 406
RIF
Sbjct: 63 YRIF 66
Score = 31.6 bits (70), Expect(2) = 6e-11
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 66 FNCDGGEVEHCGNGARC 82
[146][TOP]
>UniRef100_A3MRQ6 Diaminopimelate epimerase n=17 Tax=pseudomallei group
RepID=DAPF_BURM7
Length = 289
Score = 58.9 bits (141), Expect(2) = 6e-11
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D + P +T Q L DR+FG+GAD ++ P V+G D+
Sbjct: 3 LSFTKMHGAGNDFVVLDGYTRALPPLTGAQVRALADRHFGIGADQLLLVEKPTVDGADFK 62
Query: 395 MRIF 406
RIF
Sbjct: 63 YRIF 66
Score = 31.6 bits (70), Expect(2) = 6e-11
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 66 FNCDGGEVEHCGNGARC 82
[147][TOP]
>UniRef100_Q0BAY6 Diaminopimelate epimerase n=1 Tax=Burkholderia ambifaria AMMD
RepID=DAPF_BURCM
Length = 289
Score = 58.9 bits (141), Expect(2) = 6e-11
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D + P +T+ Q L +R+FG+GAD ++ P V+G D+
Sbjct: 3 LSFTKMHGAGNDFVVLDGYSRALPPLTEAQVRALANRHFGIGADQLLLVEKPTVDGADFK 62
Query: 395 MRIF 406
RIF
Sbjct: 63 YRIF 66
Score = 31.6 bits (70), Expect(2) = 6e-11
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 66 FNCDGGEVEHCGNGARC 82
[148][TOP]
>UniRef100_C9MWZ2 Diaminopimelate epimerase n=1 Tax=Leptotrichia hofstadii F0254
RepID=C9MWZ2_9FUSO
Length = 283
Score = 53.5 bits (127), Expect(2) = 8e-11
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQ--EQAAKLCDRNFGVGADGVI 358
+L F KY G GNDFI+V R+ E I + E A+++CDR+FG+GADG+I
Sbjct: 1 MLKFEKYQGAGNDFIIVTERELIEKGIPEYGEFASQVCDRHFGIGADGLI 50
Score = 36.6 bits (83), Expect(2) = 8e-11
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
FFN DGS+ MCGNG+RC
Sbjct: 63 FFNGDGSQAPMCGNGIRC 80
[149][TOP]
>UniRef100_C7NAR4 Diaminopimelate epimerase n=1 Tax=Leptotrichia buccalis DSM 1135
RepID=C7NAR4_LEPBD
Length = 283
Score = 53.1 bits (126), Expect(2) = 8e-11
Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQ--EQAAKLCDRNFGVGADGVI 358
+L F KY G GNDF++V +D E I + E A+++CDR+FG+GADG+I
Sbjct: 1 MLKFEKYQGAGNDFVIVAEKDLIEKGIPEYGEFASQVCDRHFGIGADGLI 50
Score = 37.0 bits (84), Expect(2) = 8e-11
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
FFN+DGS+ MCGNG+RC
Sbjct: 63 FFNADGSQAPMCGNGIRC 80
[150][TOP]
>UniRef100_C5BUL6 Diaminopimelate epimerase n=1 Tax=Teredinibacter turnerae T7901
RepID=DAPF_TERTT
Length = 276
Score = 56.2 bits (134), Expect(2) = 8e-11
Identities = 31/64 (48%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGV-IFAMPGVNGTDYA 394
L F K HGLGNDF+++D S + IT E+A KL DR+FGVG D V + P D+
Sbjct: 3 LRFTKMHGLGNDFVMID-AISQKVTITPERARKLADRHFGVGCDQVLVVESPDNPDADFR 61
Query: 395 MRIF 406
RIF
Sbjct: 62 YRIF 65
Score = 33.9 bits (76), Expect(2) = 8e-11
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE E CGNG RC
Sbjct: 65 FNNDGSEVENCGNGARC 81
[151][TOP]
>UniRef100_B5JD45 Diaminopimelate epimerase n=1 Tax=Verrucomicrobiae bacterium DG1235
RepID=B5JD45_9BACT
Length = 270
Score = 58.2 bits (139), Expect(2) = 8e-11
Identities = 24/49 (48%), Positives = 37/49 (75%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMP 370
F K HG GNDF++++N D + ++++EQ A+LC+R FG+GADG+I P
Sbjct: 5 FTKMHGAGNDFVMIENLDG-KIELSKEQVARLCNRRFGIGADGLILLNP 52
Score = 32.0 bits (71), Expect(2) = 8e-11
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
++N+DG +MCGNG RC
Sbjct: 64 YYNADGGRVDMCGNGARC 81
[152][TOP]
>UniRef100_UPI0001BA0BE6 diaminopimelate epimerase n=1 Tax=Blattabacterium sp. (Periplaneta
americana) str. BPLAN RepID=UPI0001BA0BE6
Length = 267
Score = 57.0 bits (136), Expect(2) = 8e-11
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVI 358
+ F KY G GNDFI++DNR P+ +LCDR+FG+GADG+I
Sbjct: 3 MDFFKYQGTGNDFIILDNRKKRIPEEDHTLFTRLCDRHFGIGADGII 49
Score = 33.1 bits (74), Expect(2) = 8e-11
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
++NSDG E MCGNG RC
Sbjct: 63 YYNSDGKESTMCGNGGRC 80
[153][TOP]
>UniRef100_A9FMF9 DapF protein n=1 Tax=Sorangium cellulosum 'So ce 56'
RepID=A9FMF9_SORC5
Length = 265
Score = 52.8 bits (125), Expect(2) = 8e-11
Identities = 26/48 (54%), Positives = 33/48 (68%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVI 358
V+ F K+ GLGNDFILV+ +T E A +LCDR FG+GADGV+
Sbjct: 5 VVRFEKWEGLGNDFILVE-----AVPMTAEAARRLCDRRFGIGADGVL 47
Score = 37.4 bits (85), Expect(2) = 8e-11
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
+N+DGS PEMCGNG+RC
Sbjct: 59 WNADGSRPEMCGNGIRC 75
[154][TOP]
>UniRef100_Q11YU6 Diaminopimelate epimerase n=1 Tax=Cytophaga hutchinsonii ATCC 33406
RepID=Q11YU6_CYTH3
Length = 261
Score = 57.8 bits (138), Expect(2) = 8e-11
Identities = 27/58 (46%), Positives = 37/58 (63%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
F KY G GNDFI++DNR + + ++ A+LCDR FG+GADG I + G D+ M
Sbjct: 5 FYKYQGTGNDFIIIDNRSNIFDRERRDIVAQLCDRRFGIGADGFIL-LQNKEGYDFEM 61
Score = 32.3 bits (72), Expect(2) = 8e-11
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
++N+DG+E MCGNG RC
Sbjct: 63 YYNADGNESTMCGNGGRC 80
[155][TOP]
>UniRef100_A2U473 Diaminopimelate epimerase n=1 Tax=Polaribacter sp. MED152
RepID=A2U473_9FLAO
Length = 256
Score = 61.6 bits (148), Expect(2) = 8e-11
Identities = 24/47 (51%), Positives = 36/47 (76%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVI 358
L F+KY G GNDF+++DNR PK ++ +++CDR+FG+GADG+I
Sbjct: 3 LPFLKYQGTGNDFVMIDNRTKIFPKKNTDKISEICDRHFGIGADGII 49
Score = 28.5 bits (62), Expect(2) = 8e-11
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
++N+DGSE CGNG RC
Sbjct: 63 YYNADGSET-FCGNGARC 79
[156][TOP]
>UniRef100_B4E7Z8 Diaminopimelate epimerase n=1 Tax=Burkholderia cenocepacia J2315
RepID=B4E7Z8_BURCJ
Length = 309
Score = 58.2 bits (139), Expect(2) = 1e-10
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D + P +T Q L +R+FG+GAD ++ P V+G D+
Sbjct: 23 LSFTKMHGAGNDFVVLDGYSRALPPLTDAQVRALANRHFGIGADQLLLVEKPTVDGADFK 82
Query: 395 MRIF 406
RIF
Sbjct: 83 YRIF 86
Score = 31.6 bits (70), Expect(2) = 1e-10
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 86 FNCDGGEVEHCGNGARC 102
[157][TOP]
>UniRef100_Q58519 Diaminopimelate epimerase n=1 Tax=Methanocaldococcus jannaschii
RepID=DAPF_METJA
Length = 295
Score = 50.4 bits (119), Expect(2) = 1e-10
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQ--EQAAKLCDRNFGVGADGVIFAM-PGVNGTD 388
+ F K H LGND+I+++ D + K + E + K+C R F VGADGVIF P + D
Sbjct: 1 MEFTKMHALGNDYIVINEFDGEKVKEEEKAEFSRKICRRGFSVGADGVIFIQKPTSDEYD 60
Query: 389 YAMRIF 406
RIF
Sbjct: 61 VRFRIF 66
Score = 39.3 bits (90), Expect(2) = 1e-10
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSE EMCGNG+RC
Sbjct: 66 FNSDGSEAEMCGNGIRC 82
[158][TOP]
>UniRef100_A2BWL6 Diaminopimelate epimerase n=1 Tax=Prochlorococcus marinus str. MIT
9515 RepID=A2BWL6_PROM5
Length = 286
Score = 52.8 bits (125), Expect(2) = 1e-10
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSS-EPKITQE---QAAKLCDRNFGVGADGVIFAMPGVNGTDY 391
F KYHG GNDFI++D R+ + K E +LCDR FG+G DG+IF + NG ++
Sbjct: 6 FEKYHGNGNDFIIIDTRNKNIFNKFISENIFDIKELCDRQFGIGGDGLIFILE-PNGNNH 64
Query: 392 AMRI 403
A I
Sbjct: 65 ARMI 68
Score = 37.0 bits (84), Expect(2) = 1e-10
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
+NSDGSE +MCGNG+RC
Sbjct: 70 YNSDGSEAQMCGNGIRC 86
[159][TOP]
>UniRef100_B0SC36 Diaminopimelate epimerase n=2 Tax=Leptospira biflexa serovar Patoc
RepID=DAPF_LEPBA
Length = 280
Score = 52.0 bits (123), Expect(2) = 1e-10
Identities = 22/48 (45%), Positives = 34/48 (70%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIF 361
++F K G+GND++ +D ++ +++ EQ KL DRNFG+G DGVIF
Sbjct: 3 INFTKMEGIGNDYVYID-ATKNDIRLSPEQIQKLSDRNFGIGGDGVIF 49
Score = 37.7 bits (86), Expect(2) = 1e-10
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 393 QCGFFNSDGSEPEMCGNGVRC 455
Q +NSDGS EMCGNGVRC
Sbjct: 59 QMDMYNSDGSSSEMCGNGVRC 79
[160][TOP]
>UniRef100_A3J518 Diaminopimelate epimerase n=1 Tax=Flavobacteria bacterium BAL38
RepID=A3J518_9FLAO
Length = 262
Score = 55.8 bits (133), Expect(2) = 1e-10
Identities = 23/47 (48%), Positives = 30/47 (63%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVI 358
+ F KY G GNDF+++DNR PK +LCDR FG+G DG+I
Sbjct: 3 ISFYKYQGTGNDFVMIDNRSEFFPKKDTNLIKQLCDRRFGIGGDGLI 49
Score = 33.9 bits (76), Expect(2) = 1e-10
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
++NSDG+E MCGNG RC
Sbjct: 63 YYNSDGNESSMCGNGGRC 80
[161][TOP]
>UniRef100_A2TUS9 Diaminopimelate epimerase n=1 Tax=Dokdonia donghaensis MED134
RepID=A2TUS9_9FLAO
Length = 259
Score = 57.0 bits (136), Expect(2) = 1e-10
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVI 358
+ F KY G GNDF+++DNR PK + A+LCDR FG+GADG++
Sbjct: 3 ISFSKYQGTGNDFVIIDNRLDIFPKDDTKLVAQLCDRKFGIGADGLM 49
Score = 32.7 bits (73), Expect(2) = 1e-10
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
++N+DG+E MCGNG RC
Sbjct: 63 YYNADGNESSMCGNGGRC 80
[162][TOP]
>UniRef100_C6W7U7 Diaminopimelate epimerase n=1 Tax=Dyadobacter fermentans DSM 18053
RepID=C6W7U7_DYAFD
Length = 259
Score = 56.6 bits (135), Expect(2) = 1e-10
Identities = 28/61 (45%), Positives = 39/61 (63%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRI 403
F KY G GNDF++VD+R+ P +++E A +C R FGVGADG+I + G D+ M
Sbjct: 5 FYKYQGTGNDFVMVDDRNLQFP-VSKELIASICHRRFGVGADGLIL-LQNAEGYDFRMVY 62
Query: 404 F 406
F
Sbjct: 63 F 63
Score = 33.1 bits (74), Expect(2) = 1e-10
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
+FN+DG E MCGNG RC
Sbjct: 62 YFNADGGEGSMCGNGGRC 79
[163][TOP]
>UniRef100_Q04W97 Diaminopimelate epimerase n=2 Tax=Leptospira borgpetersenii serovar
Hardjo-bovis RepID=DAPF_LEPBJ
Length = 281
Score = 53.1 bits (126), Expect(2) = 1e-10
Identities = 26/63 (41%), Positives = 41/63 (65%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
L F K G+GND+I +D+ ++ ++T EQ K+ +RNFG+G+DGVIF G D+ M
Sbjct: 4 LKFTKMEGIGNDYIYIDSTQANI-RLTPEQIQKISNRNFGIGSDGVIFIRNSKQG-DFMM 61
Query: 398 RIF 406
++
Sbjct: 62 DMY 64
Score = 36.2 bits (82), Expect(2) = 1e-10
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
+NSDGS EMCGNG+RC
Sbjct: 64 YNSDGSSSEMCGNGIRC 80
[164][TOP]
>UniRef100_C8SAM2 Diaminopimelate epimerase n=1 Tax=Ferroglobus placidus DSM 10642
RepID=C8SAM2_FERPL
Length = 281
Score = 47.0 bits (110), Expect(2) = 1e-10
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAK----LCDRNFGVGADGVIF 361
+ F K HG GNDF+++D + E + +E+ K + RNFG+GADGVIF
Sbjct: 3 IKFAKMHGNGNDFVIID--EFREEVVKEEEKPKFVRAIAHRNFGIGADGVIF 52
Score = 42.4 bits (98), Expect(2) = 1e-10
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +3
Query: 369 QESMVLITQCGFFNSDGSEPEMCGNGVRC 455
Q+S V + +FNSDGSE EMCGNG+RC
Sbjct: 54 QKSEVADAKFRYFNSDGSEAEMCGNGIRC 82
[165][TOP]
>UniRef100_C1Q8C9 Diaminopimelate epimerase n=1 Tax=Brachyspira murdochii DSM 12563
RepID=C1Q8C9_9SPIR
Length = 279
Score = 51.6 bits (122), Expect(2) = 1e-10
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAK----LCDRNFGVGADGVIFAMPGVNG 382
+L+F K HG+GND+I V D + K T E A K L R++ +GADG+I MP +
Sbjct: 2 ILNFTKMHGIGNDYIYV---DCFKEKFTVEDAMKYSPILSHRHYSIGADGIILIMPS-DK 57
Query: 383 TDYAMRIFQF 412
D MR+F +
Sbjct: 58 ADVQMRMFNY 67
Score = 37.7 bits (86), Expect(2) = 1e-10
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 393 QCGFFNSDGSEPEMCGNGVRC 455
Q FN DGSE EMCGNG+RC
Sbjct: 61 QMRMFNYDGSESEMCGNGIRC 81
[166][TOP]
>UniRef100_A0LE31 Diaminopimelate epimerase n=1 Tax=Magnetococcus sp. MC-1
RepID=DAPF_MAGSM
Length = 278
Score = 57.4 bits (137), Expect(2) = 1e-10
Identities = 27/61 (44%), Positives = 41/61 (67%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRI 403
F+K HGLGNDF+++D+ +S +++ ++A DR GVG D V+ +PGV G D MRI
Sbjct: 5 FIKMHGLGNDFVVLDHLESPR-ELSPQEARFWADRRRGVGCDQVVQLLPGVEGGDAQMRI 63
Query: 404 F 406
+
Sbjct: 64 Y 64
Score = 32.0 bits (71), Expect(2) = 1e-10
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 393 QCGFFNSDGSEPEMCGNGVRC 455
Q +N DGS EMCGN +RC
Sbjct: 60 QMRIYNPDGSRAEMCGNAMRC 80
[167][TOP]
>UniRef100_A6GYX5 Diaminopimelate epimerase n=1 Tax=Flavobacterium psychrophilum
JIP02/86 RepID=DAPF_FLAPJ
Length = 256
Score = 57.0 bits (136), Expect(2) = 1e-10
Identities = 28/56 (50%), Positives = 34/56 (60%)
Frame = +2
Query: 230 KYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
KY G GNDFI++DNR PK KLCDR FG+GADG+I + TD+ M
Sbjct: 5 KYQGTGNDFIMIDNRLQIFPKQNTALIQKLCDRRFGIGADGLIL-LENDQSTDFKM 59
Score = 32.3 bits (72), Expect(2) = 1e-10
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
++NSDG++ MCGNG RC
Sbjct: 61 YYNSDGNQSTMCGNGGRC 78
[168][TOP]
>UniRef100_A9AC26 Diaminopimelate epimerase n=1 Tax=Burkholderia multivorans ATCC
17616 RepID=A9AC26_BURM1
Length = 387
Score = 57.4 bits (137), Expect(2) = 2e-10
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D + P +T Q L R+FG+GAD ++ P V+G D+
Sbjct: 101 LSFTKMHGAGNDFVVLDGYSRTLPPLTAAQVRALASRHFGIGADQLLLVEKPTVDGADFK 160
Query: 395 MRIF 406
RIF
Sbjct: 161 YRIF 164
Score = 31.6 bits (70), Expect(2) = 2e-10
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 164 FNCDGGEVEHCGNGARC 180
[169][TOP]
>UniRef100_UPI00016A8432 diaminopimelate epimerase n=1 Tax=Burkholderia thailandensis Bt4
RepID=UPI00016A8432
Length = 289
Score = 57.4 bits (137), Expect(2) = 2e-10
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D + P +T L DR+FG+GAD ++ P V+G D+
Sbjct: 3 LSFTKMHGAGNDFVVLDGYSRALPPLTDALVRALADRHFGIGADQLLLVEKPTVDGADFK 62
Query: 395 MRIF 406
RIF
Sbjct: 63 YRIF 66
Score = 31.6 bits (70), Expect(2) = 2e-10
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 66 FNCDGGEVEHCGNGARC 82
[170][TOP]
>UniRef100_UPI00016A4F2E diaminopimelate epimerase n=1 Tax=Burkholderia thailandensis TXDOH
RepID=UPI00016A4F2E
Length = 289
Score = 57.4 bits (137), Expect(2) = 2e-10
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D + P +T L DR+FG+GAD ++ P V+G D+
Sbjct: 3 LSFTKMHGAGNDFVVLDGYSRALPPLTDALVRALADRHFGIGADQLLLVEKPTVDGADFK 62
Query: 395 MRIF 406
RIF
Sbjct: 63 YRIF 66
Score = 31.6 bits (70), Expect(2) = 2e-10
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 66 FNCDGGEVEHCGNGARC 82
[171][TOP]
>UniRef100_B9BW48 Diaminopimelate epimerase n=2 Tax=Burkholderia multivorans
RepID=B9BW48_9BURK
Length = 289
Score = 57.4 bits (137), Expect(2) = 2e-10
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D + P +T Q L R+FG+GAD ++ P V+G D+
Sbjct: 3 LSFTKMHGAGNDFVVLDGYSRTLPPLTAAQVRALASRHFGIGADQLLLVEKPTVDGADFK 62
Query: 395 MRIF 406
RIF
Sbjct: 63 YRIF 66
Score = 31.6 bits (70), Expect(2) = 2e-10
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 66 FNCDGGEVEHCGNGARC 82
[172][TOP]
>UniRef100_B3CVY6 Diaminopimelate epimerase n=2 Tax=Burkholderia multivorans
RepID=B3CVY6_BURM1
Length = 289
Score = 57.4 bits (137), Expect(2) = 2e-10
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D + P +T Q L R+FG+GAD ++ P V+G D+
Sbjct: 3 LSFTKMHGAGNDFVVLDGYSRTLPPLTAAQVRALASRHFGIGADQLLLVEKPTVDGADFK 62
Query: 395 MRIF 406
RIF
Sbjct: 63 YRIF 66
Score = 31.6 bits (70), Expect(2) = 2e-10
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 66 FNCDGGEVEHCGNGARC 82
[173][TOP]
>UniRef100_Q2T269 Diaminopimelate epimerase n=1 Tax=Burkholderia thailandensis E264
RepID=DAPF_BURTA
Length = 289
Score = 57.4 bits (137), Expect(2) = 2e-10
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D + P +T L DR+FG+GAD ++ P V+G D+
Sbjct: 3 LSFTKMHGAGNDFVVLDGYSRALPPLTDALVRALADRHFGIGADQLLLVEKPTVDGADFK 62
Query: 395 MRIF 406
RIF
Sbjct: 63 YRIF 66
Score = 31.6 bits (70), Expect(2) = 2e-10
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 66 FNCDGGEVEHCGNGARC 82
[174][TOP]
>UniRef100_B8CX90 Diaminopimelate epimerase n=1 Tax=Halothermothrix orenii H 168
RepID=DAPF_HALOH
Length = 284
Score = 50.8 bits (120), Expect(2) = 2e-10
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAK-LCDRNFGVGADGVIFAMPGVN-GTDY 391
L F K HG GNDFI+V+ S+ P + + A+ LC R+F +GADG+I +P + D+
Sbjct: 3 LSFTKMHGTGNDFIMVNG--SNYPDLDFSKLARQLCRRHFSIGADGLIIVLPPESVEHDF 60
Query: 392 AMRIF 406
MRIF
Sbjct: 61 RMRIF 65
Score = 38.1 bits (87), Expect(2) = 2e-10
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE EMCGNG+RC
Sbjct: 65 FNADGSEAEMCGNGIRC 81
[175][TOP]
>UniRef100_C0QAP3 Diaminopimelate epimerase n=1 Tax=Desulfobacterium autotrophicum
HRM2 RepID=DAPF_DESAH
Length = 283
Score = 49.3 bits (116), Expect(2) = 2e-10
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQ--AAKLCDRNFGVGADGVIFAMPGVNGTDY 391
L+F K GLGNDF+++D+R+ + + A KLC R FGVG DG+I + D
Sbjct: 3 LNFTKMEGLGNDFVMLDDRNGAIVQTVPYPVLAKKLCSRRFGVGGDGIIIIIDS-ETADV 61
Query: 392 AMRIF 406
+IF
Sbjct: 62 GFKIF 66
Score = 39.7 bits (91), Expect(2) = 2e-10
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DGSEPEMCGNG+RC
Sbjct: 66 FNPDGSEPEMCGNGMRC 82
[176][TOP]
>UniRef100_A3DK16 Diaminopimelate epimerase n=3 Tax=Clostridium thermocellum
RepID=DAPF_CLOTH
Length = 280
Score = 52.0 bits (123), Expect(2) = 2e-10
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F K HGLGND+I V+ + + E A K+ DR+FG+G+DG++ MP D+ M
Sbjct: 1 MRFTKMHGLGNDYIYVNCFEETVEN-PSEVAKKVSDRHFGIGSDGLVLIMPS-ERADFKM 58
Query: 398 RIF 406
R+F
Sbjct: 59 RMF 61
Score = 37.0 bits (84), Expect(2) = 2e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSE EMCGN +RC
Sbjct: 61 FNSDGSEAEMCGNAIRC 77
[177][TOP]
>UniRef100_C6PE47 Diaminopimelate epimerase n=1 Tax=Thermoanaerobacterium
thermosaccharolyticum DSM 571 RepID=C6PE47_CLOTS
Length = 277
Score = 53.1 bits (126), Expect(2) = 2e-10
Identities = 29/62 (46%), Positives = 38/62 (61%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F K +GLGNDFI+ +N D+ E A KLCDR+FG+GADG++ P D M
Sbjct: 1 MKFTKMNGLGNDFIVFENLDNEEYDY-DILARKLCDRHFGIGADGLLIVEPS-GIADIKM 58
Query: 398 RI 403
RI
Sbjct: 59 RI 60
Score = 35.8 bits (81), Expect(2) = 2e-10
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3
Query: 408 NSDGSEPEMCGNGVRC 455
NSDGSE EMCGNG RC
Sbjct: 62 NSDGSEAEMCGNGARC 77
[178][TOP]
>UniRef100_A8UN00 Diaminopimelate epimerase n=1 Tax=Flavobacteriales bacterium ALC-1
RepID=A8UN00_9FLAO
Length = 257
Score = 56.2 bits (134), Expect(2) = 2e-10
Identities = 26/45 (57%), Positives = 31/45 (68%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVI 358
F KY G GNDFI+VDNR K ++ A+LCDR FG+GADG I
Sbjct: 3 FYKYQGTGNDFIIVDNRLQKIDKGDTKRIAELCDRRFGIGADGFI 47
Score = 32.7 bits (73), Expect(2) = 2e-10
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
++N+DG+E MCGNG RC
Sbjct: 61 YYNADGNESSMCGNGGRC 78
[179][TOP]
>UniRef100_C4CS57 Diaminopimelate epimerase n=1 Tax=Spirosoma linguale DSM 74
RepID=C4CS57_9SPHI
Length = 257
Score = 55.5 bits (132), Expect(2) = 2e-10
Identities = 28/65 (43%), Positives = 36/65 (55%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F KY G GNDFIL+D+R + P Q LC R FG+GADG+I N +Y
Sbjct: 1 MDFFKYQGTGNDFILIDDRARTFPAADQAFIEHLCHRRFGIGADGLILLQ---NDPEYDF 57
Query: 398 RIFQF 412
R+ F
Sbjct: 58 RMVYF 62
Score = 33.5 bits (75), Expect(2) = 2e-10
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
+FN+DG+E MCGNG RC
Sbjct: 61 YFNADGAEGSMCGNGGRC 78
[180][TOP]
>UniRef100_A6F216 Diaminopimelate epimerase n=1 Tax=Marinobacter algicola DG893
RepID=A6F216_9ALTE
Length = 327
Score = 52.8 bits (125), Expect(2) = 2e-10
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEP-KITQEQAAKLCDRNFGVGADG-VIFAMPGVNGTD 388
+L+F K HGLGNDF++VD S+P ++ E +L DRNFG+G D ++ PG+ D
Sbjct: 17 MLNFTKMHGLGNDFMVVD--AISQPFRLRPEMIRELADRNFGIGFDQLLVVEPPGLPDVD 74
Query: 389 YAMRIF 406
+ RIF
Sbjct: 75 FRYRIF 80
Score = 35.8 bits (81), Expect(2) = 2e-10
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSE E CGNG RC
Sbjct: 80 FNSDGSEVEQCGNGARC 96
[181][TOP]
>UniRef100_Q310Q1 Diaminopimelate epimerase n=1 Tax=Desulfovibrio desulfuricans
subsp. desulfuricans str. G20 RepID=Q310Q1_DESDG
Length = 283
Score = 55.5 bits (132), Expect(2) = 2e-10
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSSEP-KITQEQAAKLCDRNFGVGADGVIF--AMPGVNGTDYA 394
F K G GNDF+ +DNR+ P + ++ A K+C R+F VGADG++F P + G DY
Sbjct: 11 FYKMQGCGNDFVFIDNRELKLPVALMEDWARKICRRSFSVGADGLVFLEEAPDIPGVDYR 70
Query: 395 MRIF 406
+
Sbjct: 71 WHFY 74
Score = 33.1 bits (74), Expect(2) = 2e-10
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
F+N+DGS EMCGN RC
Sbjct: 73 FYNADGSRAEMCGNASRC 90
[182][TOP]
>UniRef100_Q1K3Q6 Diaminopimelate epimerase n=1 Tax=Desulfuromonas acetoxidans DSM
684 RepID=Q1K3Q6_DESAC
Length = 282
Score = 51.6 bits (122), Expect(2) = 2e-10
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDN--RDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDY 391
+ F+K HG GND++ VD +D P +E A ++ DR+FGVG+DG+I +P + D
Sbjct: 1 MKFIKMHGAGNDYVYVDGFQQDVHRP---EELAVRISDRHFGVGSDGLILILPS-DCADA 56
Query: 392 AMRIF 406
MR+F
Sbjct: 57 RMRMF 61
Score = 37.0 bits (84), Expect(2) = 2e-10
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE +MCGNG+RC
Sbjct: 61 FNADGSEAQMCGNGIRC 77
[183][TOP]
>UniRef100_B3EBJ0 Diaminopimelate epimerase n=1 Tax=Geobacter lovleyi SZ
RepID=B3EBJ0_GEOLS
Length = 278
Score = 49.3 bits (116), Expect(2) = 2e-10
Identities = 26/63 (41%), Positives = 37/63 (58%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F K HG GND++ VD + E A K+ +RNFG+G+DG+I MP + D M
Sbjct: 1 MKFTKMHGAGNDYVYVDCFKETVDN-PAETAIKVSNRNFGIGSDGLILIMP-TDKADVRM 58
Query: 398 RIF 406
R+F
Sbjct: 59 RMF 61
Score = 39.3 bits (90), Expect(2) = 2e-10
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSE EMCGNG+RC
Sbjct: 61 FNSDGSESEMCGNGIRC 77
[184][TOP]
>UniRef100_A6PLJ4 Diaminopimelate epimerase n=1 Tax=Victivallis vadensis ATCC BAA-548
RepID=A6PLJ4_9BACT
Length = 276
Score = 55.1 bits (131), Expect(2) = 2e-10
Identities = 27/63 (42%), Positives = 41/63 (65%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F K+HGLGNDF++V+ + + A LCDR+FG+GADGV+ P + G+ + M
Sbjct: 1 MQFSKWHGLGNDFVIVEPEKNPGFDF-RGSAEHLCDRHFGIGADGVVTVRP-LGGSAFEM 58
Query: 398 RIF 406
RI+
Sbjct: 59 RIY 61
Score = 33.5 bits (75), Expect(2) = 2e-10
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
+NSDG+E EMCGN RC
Sbjct: 61 YNSDGTETEMCGNATRC 77
[185][TOP]
>UniRef100_Q1VXI7 Diaminopimelate epimerase n=1 Tax=Psychroflexus torquis ATCC 700755
RepID=Q1VXI7_9FLAO
Length = 263
Score = 55.1 bits (131), Expect(2) = 2e-10
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNR---DSSEPKITQEQAAKLCDRNFGVGADG-VIFAMPGVNGT 385
LHF KY G GNDF+L+DNR ++ K Q LCDR FGVGADG ++ P + +
Sbjct: 3 LHFFKYQGTGNDFVLIDNRIPIFKNDAKFIQ----GLCDRRFGVGADGLILLENPSDSIS 58
Query: 386 DYAMRIF 406
D+ M F
Sbjct: 59 DFKMIYF 65
Score = 33.5 bits (75), Expect(2) = 2e-10
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
+FN+DG E MCGNG RC
Sbjct: 64 YFNADGKESSMCGNGGRC 81
[186][TOP]
>UniRef100_C8X410 Diaminopimelate epimerase n=1 Tax=Desulfohalobium retbaense DSM
5692 RepID=C8X410_9DELT
Length = 281
Score = 52.8 bits (125), Expect(2) = 3e-10
Identities = 32/73 (43%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Frame = +2
Query: 200 KKETGVLHFV-KYHGLGNDFILVDNRDSSEP-KITQEQAAKLCDRNFGVGADGVIF--AM 367
+ + G FV K G GNDFIL+DN +S P K E A K+C R FG GADG+IF
Sbjct: 2 RSDFGHASFVYKMQGSGNDFILIDNTESRVPQKAMAEWAQKICRRAFGAGADGLIFLDEA 61
Query: 368 PGVNGTDYAMRIF 406
P + DY +
Sbjct: 62 PADSEADYIWHFY 74
Score = 35.4 bits (80), Expect(2) = 3e-10
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
F+N+DGS EMCGNG RC
Sbjct: 73 FYNADGSRAEMCGNGSRC 90
[187][TOP]
>UniRef100_C5PKV0 Diaminopimelate epimerase n=1 Tax=Sphingobacterium spiritivorum
ATCC 33861 RepID=C5PKV0_9SPHI
Length = 259
Score = 56.6 bits (135), Expect(2) = 3e-10
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +2
Query: 209 TGVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVI 358
T + F KY G GNDFIL+DNR+ + + + ++CDR FGVGADG++
Sbjct: 2 TDQIKFYKYQGAGNDFILIDNRNGAFERANEAFIKQICDRRFGVGADGLM 51
Score = 31.6 bits (70), Expect(2) = 3e-10
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
++N+DG E MCGNG RC
Sbjct: 65 YYNADGREGSMCGNGGRC 82
[188][TOP]
>UniRef100_C0YJ58 Diaminopimelate epimerase n=1 Tax=Chryseobacterium gleum ATCC 35910
RepID=C0YJ58_9FLAO
Length = 255
Score = 55.1 bits (131), Expect(2) = 3e-10
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVI 358
+ F KY G GNDF++VDNRD K + KLCDR FG+GADG+I
Sbjct: 1 MEFYKYQGTGNDFVMVDNRDLQFTK-DKGIIEKLCDRRFGIGADGLI 46
Score = 33.1 bits (74), Expect(2) = 3e-10
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
++NSDG E MCGNG RC
Sbjct: 60 YYNSDGGESTMCGNGGRC 77
[189][TOP]
>UniRef100_A3JE40 Diaminopimelate epimerase n=1 Tax=Marinobacter sp. ELB17
RepID=A3JE40_9ALTE
Length = 328
Score = 53.1 bits (126), Expect(2) = 4e-10
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +2
Query: 212 GVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADG-VIFAMPGVNGTD 388
GVL F K HGLGNDF++VD S ++ E +L DR+FG+G D ++ PG+ D
Sbjct: 34 GVLRFTKMHGLGNDFMVVD-AISQMFRLRPEMIRELADRHFGIGFDQLLVVEPPGLPDVD 92
Query: 389 YAMRIF 406
+ RIF
Sbjct: 93 FRYRIF 98
Score = 34.7 bits (78), Expect(2) = 4e-10
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE E CGNG RC
Sbjct: 98 FNADGSEVEQCGNGARC 114
[190][TOP]
>UniRef100_B2H2N6 Diaminopimelate epimerase n=1 Tax=Burkholderia pseudomallei 1655
RepID=B2H2N6_BURPS
Length = 289
Score = 56.2 bits (134), Expect(2) = 4e-10
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D + P +T Q L DR+FG+GAD ++ P V+ D+
Sbjct: 3 LSFTKMHGAGNDFVVLDGYTRALPPLTGAQVRALADRHFGIGADQLLLVEKPTVDDADFK 62
Query: 395 MRIF 406
RIF
Sbjct: 63 YRIF 66
Score = 31.6 bits (70), Expect(2) = 4e-10
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 66 FNCDGGEVEHCGNGARC 82
[191][TOP]
>UniRef100_Q1MPX8 Diaminopimelate epimerase n=1 Tax=Lawsonia intracellularis
PHE/MN1-00 RepID=Q1MPX8_LAWIP
Length = 281
Score = 52.4 bits (124), Expect(2) = 4e-10
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAK-LCDRNFGVGADGV-IFAMPGVNGTDY 391
+ F K HG GNDF+ +DNR PK A+ +C R GVGADG+ F + + G DY
Sbjct: 10 IEFFKLHGCGNDFVFIDNRSLFIPKEKMSSWAEVICRRKRGVGADGIAFFELSTIAGADY 69
Query: 392 AMRIF 406
F
Sbjct: 70 MWHFF 74
Score = 35.4 bits (80), Expect(2) = 4e-10
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
FFNSDGS EMCGN RC
Sbjct: 73 FFNSDGSRAEMCGNASRC 90
[192][TOP]
>UniRef100_UPI00016C50AA diaminopimelate epimerase n=1 Tax=Gemmata obscuriglobus UQM 2246
RepID=UPI00016C50AA
Length = 280
Score = 49.3 bits (116), Expect(2) = 4e-10
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F K HGLGND++ VD P A + DR+FG+G+DG+I P D M
Sbjct: 1 MQFTKMHGLGNDYVYVDCVRQKPPADPAALARAVSDRHFGIGSDGLILICPS-EKADARM 59
Query: 398 RIF 406
R+F
Sbjct: 60 RMF 62
Score = 38.5 bits (88), Expect(2) = 4e-10
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE EMCGNGVRC
Sbjct: 62 FNADGSESEMCGNGVRC 78
[193][TOP]
>UniRef100_A8UU47 Diaminopimelate epimerase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1
RepID=A8UU47_9AQUI
Length = 278
Score = 48.1 bits (113), Expect(2) = 4e-10
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAA-------KLCDRNFGVGADG-VIFAMPG 373
+ F K G GNDFIL+DNRD + +E KLC+ + GVGADG ++ P
Sbjct: 1 MDFAKLQGSGNDFILIDNRDGKVYRKIEELGVCLKEFILKLCEPHRGVGADGLILIEEPE 60
Query: 374 VNGTDYAMRIF 406
N D+ + F
Sbjct: 61 DNANDFRWQFF 71
Score = 39.7 bits (91), Expect(2) = 4e-10
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
FFNSDGSE EMCGNG RC
Sbjct: 70 FFNSDGSEAEMCGNGSRC 87
[194][TOP]
>UniRef100_Q21P78 Diaminopimelate epimerase n=1 Tax=Saccharophagus degradans 2-40
RepID=DAPF_SACD2
Length = 277
Score = 54.7 bits (130), Expect(2) = 4e-10
Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGV-IFAMPGVNGTDYA 394
L F K HGLGNDF+++D S IT E+A +L DR+FGVG D V + P D+
Sbjct: 3 LRFTKMHGLGNDFVMID-AISQRVTITPERARQLADRHFGVGCDQVLVVETPDSPDADFK 61
Query: 395 MRIF 406
RIF
Sbjct: 62 YRIF 65
Score = 33.1 bits (74), Expect(2) = 4e-10
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DGSE E CGNG RC
Sbjct: 65 FNHDGSEVENCGNGARC 81
[195][TOP]
>UniRef100_B1C3N1 Putative uncharacterized protein n=1 Tax=Clostridium spiroforme DSM
1552 RepID=B1C3N1_9FIRM
Length = 277
Score = 52.8 bits (125), Expect(2) = 4e-10
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVD--NRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDY 391
LHF K GLGND+I VD N+D K E K+ DR+FG+G+DG+I +P + D+
Sbjct: 3 LHFTKMEGLGNDYIYVDGINQDVCMDK---EFIKKISDRHFGIGSDGMIVILPS-DKYDF 58
Query: 392 AMRIF 406
MR+F
Sbjct: 59 KMRMF 63
Score = 35.0 bits (79), Expect(2) = 4e-10
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DGSE +MCGNG+RC
Sbjct: 63 FNLDGSEGKMCGNGIRC 79
[196][TOP]
>UniRef100_C6X3R8 Diaminopimelate epimerase n=1 Tax=Flavobacteriaceae bacterium
3519-10 RepID=C6X3R8_FLAB3
Length = 262
Score = 54.3 bits (129), Expect(2) = 4e-10
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVI 358
++ F KYHG GNDF+++DNR+ K + ++LCDR FG+G DG+I
Sbjct: 8 LMTFYKYHGTGNDFVMIDNRNLLFSK-DKNLVSRLCDRRFGIGGDGLI 54
Score = 33.5 bits (75), Expect(2) = 4e-10
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
++NSDG+E MCGNG RC
Sbjct: 68 YYNSDGNESTMCGNGGRC 85
[197][TOP]
>UniRef100_Q6AE05 Diaminopimelate epimerase n=1 Tax=Leifsonia xyli subsp. xyli
RepID=DAPF_LEIXX
Length = 292
Score = 55.1 bits (131), Expect(2) = 5e-10
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAM 367
LHF K G GNDF+L + D + P ++ Q A++CDR+FGVGADGVI A+
Sbjct: 4 LHFTKGQGTGNDFVLYADPDGTLP-LSAGQIAEICDRHFGVGADGVIRAV 52
Score = 32.3 bits (72), Expect(2) = 5e-10
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVR 452
++N+DGS EMCGNG+R
Sbjct: 76 YYNADGSAAEMCGNGIR 92
[198][TOP]
>UniRef100_A2BR46 Diaminopimelate epimerase n=1 Tax=Prochlorococcus marinus str.
AS9601 RepID=A2BR46_PROMS
Length = 286
Score = 49.3 bits (116), Expect(2) = 5e-10
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAA----KLCDRNFGVGADGVIFAMPGVNGT 385
+ F KY G GNDF+++D+R + K + K+C+R FGVGADGVIF + N
Sbjct: 4 ISFEKYQGNGNDFVIIDSRGNELYKNYKTNKIFDIKKICNRQFGVGADGVIF-IEEPNED 62
Query: 386 DYAMRI 403
+YA I
Sbjct: 63 NYAKMI 68
Score = 38.1 bits (87), Expect(2) = 5e-10
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSE +MCGNG+RC
Sbjct: 70 FNSDGSEAQMCGNGIRC 86
[199][TOP]
>UniRef100_Q74FS5 Diaminopimelate epimerase n=1 Tax=Geobacter sulfurreducens
RepID=Q74FS5_GEOSL
Length = 282
Score = 48.1 bits (113), Expect(2) = 5e-10
Identities = 24/63 (38%), Positives = 39/63 (61%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F K HG GND++ V+ + + ++ A K+ +RNFG+G+DG+I MP + D M
Sbjct: 1 MKFTKMHGAGNDYVYVNCFEETVGN-PEQTAIKVSNRNFGIGSDGLILIMPS-DKADVRM 58
Query: 398 RIF 406
R+F
Sbjct: 59 RMF 61
Score = 39.3 bits (90), Expect(2) = 5e-10
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSE EMCGNG+RC
Sbjct: 61 FNSDGSESEMCGNGIRC 77
[200][TOP]
>UniRef100_A5G8E2 Diaminopimelate epimerase n=1 Tax=Geobacter uraniireducens Rf4
RepID=A5G8E2_GEOUR
Length = 278
Score = 48.1 bits (113), Expect(2) = 5e-10
Identities = 26/63 (41%), Positives = 37/63 (58%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F K HG GND++ V N S + A K+ +RNFG+G+DG+I MP + D M
Sbjct: 1 MKFTKMHGAGNDYVYV-NCFSERVDNPADVAIKVSNRNFGIGSDGLILIMPS-DKADVRM 58
Query: 398 RIF 406
R+F
Sbjct: 59 RMF 61
Score = 39.3 bits (90), Expect(2) = 5e-10
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSE EMCGNG+RC
Sbjct: 61 FNSDGSESEMCGNGIRC 77
[201][TOP]
>UniRef100_A5N7G4 DapF n=2 Tax=Clostridium kluyveri RepID=A5N7G4_CLOK5
Length = 274
Score = 55.1 bits (131), Expect(2) = 5e-10
Identities = 23/47 (48%), Positives = 35/47 (74%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVI 358
+ F K HG GNDFI++D+R++ +E A +LC+R+FG+GADGV+
Sbjct: 1 MKFTKMHGTGNDFIVIDDRENRFLGKEEELALRLCNRHFGIGADGVL 47
Score = 32.3 bits (72), Expect(2) = 5e-10
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3
Query: 408 NSDGSEPEMCGNGVRC 455
NSDGS MCGNG+RC
Sbjct: 63 NSDGSYASMCGNGIRC 78
[202][TOP]
>UniRef100_C2FRQ3 Diaminopimelate epimerase n=1 Tax=Sphingobacterium spiritivorum
ATCC 33300 RepID=C2FRQ3_9SPHI
Length = 259
Score = 55.8 bits (133), Expect(2) = 5e-10
Identities = 25/50 (50%), Positives = 33/50 (66%)
Frame = +2
Query: 209 TGVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVI 358
T + F KY G GNDFIL+DNR + + + +LCDR FGVGADG++
Sbjct: 2 TDQIKFYKYQGAGNDFILIDNRKAVFERSNEAFVKQLCDRRFGVGADGLM 51
Score = 31.6 bits (70), Expect(2) = 5e-10
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
++N+DG E MCGNG RC
Sbjct: 65 YYNADGREGSMCGNGGRC 82
[203][TOP]
>UniRef100_UPI00017433E4 Diaminopimelate epimerase n=1 Tax=candidate division TM7
single-cell isolate TM7a RepID=UPI00017433E4
Length = 193
Score = 50.4 bits (119), Expect(2) = 5e-10
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQ--EQAAKLCDRNFGVGADGVI 358
+L F KY G GNDF++V ++ E I + E A+++C+R+FG+GADG+I
Sbjct: 1 MLKFEKYQGAGNDFVIVSEKELIEKGIPEYGEFASQVCNRHFGIGADGLI 50
Score = 37.0 bits (84), Expect(2) = 5e-10
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
FFN+DGS+ MCGNG+RC
Sbjct: 63 FFNADGSQAPMCGNGIRC 80
[204][TOP]
>UniRef100_A1TXX7 Diaminopimelate epimerase n=1 Tax=Marinobacter aquaeolei VT8
RepID=A1TXX7_MARAV
Length = 308
Score = 52.4 bits (124), Expect(2) = 6e-10
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEP-KITQEQAAKLCDRNFGVGADG-VIFAMPGVNGTD 388
VL F K HGLGNDF++VD S+P ++ + +L DRNFG+G D ++ PG+ D
Sbjct: 11 VLRFTKMHGLGNDFMVVD--AISQPFRLAPDTIRELADRNFGIGFDQLLVVEPPGLPDVD 68
Query: 389 YAMRIF 406
+ RIF
Sbjct: 69 FRYRIF 74
Score = 34.7 bits (78), Expect(2) = 6e-10
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE E CGNG RC
Sbjct: 74 FNADGSEVEQCGNGARC 90
[205][TOP]
>UniRef100_B1G3K4 Diaminopimelate epimerase n=1 Tax=Burkholderia graminis C4D1M
RepID=B1G3K4_9BURK
Length = 300
Score = 55.5 bits (132), Expect(2) = 6e-10
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D + +T EQ L DR+FGVGAD ++ P V+G D+
Sbjct: 16 LKFTKMHGAGNDFVVLDGYTQAL-NLTPEQVRALADRHFGVGADQLLLVEKPTVDGVDFR 74
Query: 395 MRIF 406
RIF
Sbjct: 75 YRIF 78
Score = 31.6 bits (70), Expect(2) = 6e-10
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 78 FNCDGGEVEHCGNGARC 94
[206][TOP]
>UniRef100_Q39RB7 Diaminopimelate epimerase n=1 Tax=Geobacter metallireducens GS-15
RepID=Q39RB7_GEOMG
Length = 282
Score = 47.8 bits (112), Expect(2) = 6e-10
Identities = 25/63 (39%), Positives = 37/63 (58%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F K HG GND++ V N ++ A K+ +RNFG+G+DG+I MP + D M
Sbjct: 1 MKFTKMHGAGNDYVYV-NCFEERVDNPEQVAIKVSNRNFGIGSDGLILIMPS-DKADVRM 58
Query: 398 RIF 406
R+F
Sbjct: 59 RMF 61
Score = 39.3 bits (90), Expect(2) = 6e-10
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSE EMCGNG+RC
Sbjct: 61 FNSDGSESEMCGNGIRC 77
[207][TOP]
>UniRef100_A3Q9P7 Diaminopimelate epimerase n=1 Tax=Shewanella loihica PV-4
RepID=DAPF_SHELP
Length = 279
Score = 52.4 bits (124), Expect(2) = 6e-10
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVN-GTDY 391
++HF K HGLGNDF++VD + + EQ +L DRNFG+G D ++ P + D+
Sbjct: 1 MIHFTKMHGLGNDFMVVDG-VTQNVYFSPEQIKRLADRNFGIGFDQLLLVEPPYDPDLDF 59
Query: 392 AMRIF 406
RIF
Sbjct: 60 HYRIF 64
Score = 34.7 bits (78), Expect(2) = 6e-10
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE E CGNG RC
Sbjct: 64 FNADGSEVEQCGNGARC 80
[208][TOP]
>UniRef100_B3PEI8 Diaminopimelate epimerase n=1 Tax=Cellvibrio japonicus Ueda107
RepID=DAPF_CELJU
Length = 276
Score = 53.9 bits (128), Expect(2) = 6e-10
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
+ F K HGLGNDF+++D S ++T E+ KL DR+FGVG D V+ +P D+
Sbjct: 3 IRFSKMHGLGNDFVVIDGI-SQTVRLTPEKIRKLADRHFGVGCDQVLLVEIPEQPNVDFR 61
Query: 395 MRIF 406
RIF
Sbjct: 62 YRIF 65
Score = 33.1 bits (74), Expect(2) = 6e-10
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DGSE E CGNG RC
Sbjct: 65 FNCDGSEVENCGNGARC 81
[209][TOP]
>UniRef100_C4C2J5 Diaminopimelate epimerase n=1 Tax=Sebaldella termitidis ATCC 33386
RepID=C4C2J5_9FUSO
Length = 133
Score = 51.2 bits (121), Expect(2) = 7e-10
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKIT--QEQAAKLCDRNFGVGADGVI 358
L F KYHGLGNDF++ D ++ + I + A K+C R FG+G DG++
Sbjct: 15 LKFEKYHGLGNDFVIFDEKELEKNNIKDYSKLAEKVCHRRFGIGGDGIL 63
Score = 35.8 bits (81), Expect(2) = 7e-10
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
++NSDGS+ MCGNG+RC
Sbjct: 76 YYNSDGSQAPMCGNGIRC 93
[210][TOP]
>UniRef100_C0ZH35 Diaminopimelate epimerase n=1 Tax=Brevibacillus brevis NBRC 100599
RepID=C0ZH35_BREBN
Length = 286
Score = 53.5 bits (127), Expect(2) = 8e-10
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKIT-QEQAAKLCDRNFGVGADGVIFAMPGVNGTDYA 394
+ F K HGLGND++ V+ + ++ E A ++ DRNFG+G DG+I MP D+
Sbjct: 1 MKFTKLHGLGNDYVYVNCFEEDLSRVDLPELARRVSDRNFGIGGDGLILIMPS-ERADFR 59
Query: 395 MRIF 406
MR+F
Sbjct: 60 MRVF 63
Score = 33.1 bits (74), Expect(2) = 8e-10
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE + CGNG+RC
Sbjct: 63 FNNDGSEAKNCGNGLRC 79
[211][TOP]
>UniRef100_UPI00019666E7 hypothetical protein METSMIF1_00422 n=1 Tax=Methanobrevibacter
smithii DSM 2374 RepID=UPI00019666E7
Length = 286
Score = 49.3 bits (116), Expect(2) = 8e-10
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSE-PKITQEQAAK-LCDRNFGVGADGVIFAMPGVNGTDY 391
L F K HG+GNDF ++D P+ + +A + LC R+FGVG DGV+F P + D
Sbjct: 6 LKFSKMHGIGNDFPIIDESAGEVIPEADKAEACRFLCHRHFGVGGDGVLFVTPS-DVADI 64
Query: 392 AMRIF 406
R+F
Sbjct: 65 GYRMF 69
Score = 37.4 bits (85), Expect(2) = 8e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DGSE EMCGNG+RC
Sbjct: 69 FNPDGSEAEMCGNGIRC 85
[212][TOP]
>UniRef100_B9AG14 Putative uncharacterized protein n=1 Tax=Methanobrevibacter smithii
DSM 2375 RepID=B9AG14_METSM
Length = 286
Score = 49.3 bits (116), Expect(2) = 8e-10
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSE-PKITQEQAAK-LCDRNFGVGADGVIFAMPGVNGTDY 391
L F K HG+GNDF ++D P+ + +A + LC R+FGVG DGV+F P + D
Sbjct: 6 LKFSKMHGIGNDFPIIDESAGEVIPEADKAEACRFLCHRHFGVGGDGVLFVTPS-DVADI 64
Query: 392 AMRIF 406
R+F
Sbjct: 65 GYRMF 69
Score = 37.4 bits (85), Expect(2) = 8e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DGSE EMCGNG+RC
Sbjct: 69 FNPDGSEAEMCGNGIRC 85
[213][TOP]
>UniRef100_B9P1W1 Diaminopimelate epimerase n=1 Tax=Prochlorococcus marinus str. MIT
9202 RepID=B9P1W1_PROMA
Length = 286
Score = 48.5 bits (114), Expect(2) = 8e-10
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSSEPKITQEQAA----KLCDRNFGVGADGVIFAMPGVNGTDY 391
F KY G GNDFI++D+R + K + K+C+R FG+GADGVIF + N +Y
Sbjct: 6 FEKYQGNGNDFIVIDSRGNDIYKNYKTNKIFDIKKICNRQFGIGADGVIF-IEEPNEDNY 64
Query: 392 AMRI 403
A I
Sbjct: 65 AKMI 68
Score = 38.1 bits (87), Expect(2) = 8e-10
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSE +MCGNG+RC
Sbjct: 70 FNSDGSEAQMCGNGIRC 86
[214][TOP]
>UniRef100_B0N3X2 Putative uncharacterized protein n=1 Tax=Clostridium ramosum DSM
1402 RepID=B0N3X2_9FIRM
Length = 283
Score = 52.4 bits (124), Expect(2) = 8e-10
Identities = 26/63 (41%), Positives = 40/63 (63%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
LHF K G+GND+I D + P + +E K+ DR+FG+G+DG+I +P + D+ M
Sbjct: 9 LHFTKMEGIGNDYIYFDGINQEIP-MDKEFIMKISDRHFGIGSDGMIVILPS-DQYDFKM 66
Query: 398 RIF 406
R+F
Sbjct: 67 RMF 69
Score = 34.3 bits (77), Expect(2) = 8e-10
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DGSE MCGNG+RC
Sbjct: 69 FNLDGSEAMMCGNGIRC 85
[215][TOP]
>UniRef100_C7LN01 Diaminopimelate epimerase n=1 Tax=Desulfomicrobium baculatum DSM
4028 RepID=C7LN01_DESBD
Length = 279
Score = 45.4 bits (106), Expect(2) = 8e-10
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSS-EPKITQEQAAKLCDRNFGVGADGVIF 361
F K G GNDFI++DNR + P+ A LC F +GADG+IF
Sbjct: 11 FYKMQGSGNDFIVIDNRAKTISPEDMPRWAKTLCPHAFSIGADGIIF 57
Score = 41.2 bits (95), Expect(2) = 8e-10
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +3
Query: 357 FLQCQESMVLITQCGFFNSDGSEPEMCGNGVRC 455
FL+ +S T+ FFN+DGS EMCGNG RC
Sbjct: 57 FLEIDDSGQAATRWHFFNADGSRAEMCGNGSRC 89
[216][TOP]
>UniRef100_C3RLM7 Diaminopimelate epimerase n=1 Tax=Mollicutes bacterium D7
RepID=C3RLM7_9MOLU
Length = 277
Score = 52.4 bits (124), Expect(2) = 8e-10
Identities = 26/63 (41%), Positives = 40/63 (63%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
LHF K G+GND+I D + P + +E K+ DR+FG+G+DG+I +P + D+ M
Sbjct: 3 LHFTKMEGIGNDYIYFDGINQEIP-MDKEFIMKISDRHFGIGSDGMIVILPS-DQYDFKM 60
Query: 398 RIF 406
R+F
Sbjct: 61 RMF 63
Score = 34.3 bits (77), Expect(2) = 8e-10
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DGSE MCGNG+RC
Sbjct: 63 FNLDGSEAMMCGNGIRC 79
[217][TOP]
>UniRef100_Q2SQ64 Diaminopimelate epimerase n=1 Tax=Hahella chejuensis KCTC 2396
RepID=DAPF_HAHCH
Length = 276
Score = 52.0 bits (123), Expect(2) = 8e-10
Identities = 30/65 (46%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADG-VIFAMPGVNGTDY 391
++ F K HGLGNDF++VD S EQ +L DRNFGVG D +I PG D+
Sbjct: 2 LIKFTKMHGLGNDFMVVD-LISQHAHFRPEQVRRLADRNFGVGFDQLLIVEPPGRPDADF 60
Query: 392 AMRIF 406
RIF
Sbjct: 61 RYRIF 65
Score = 34.7 bits (78), Expect(2) = 8e-10
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE E CGNG RC
Sbjct: 65 FNADGSEVEQCGNGARC 81
[218][TOP]
>UniRef100_Q088K8 Diaminopimelate epimerase n=1 Tax=Shewanella frigidimarina NCIMB
400 RepID=DAPF_SHEFN
Length = 275
Score = 52.0 bits (123), Expect(2) = 8e-10
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVN-GTDY 391
++HF K HGLGNDF++VD + + EQ +L DRNFG+G D ++ P + D+
Sbjct: 1 MIHFTKMHGLGNDFMVVDG-VTQNVFFSPEQIRRLADRNFGIGFDQLLLVEPPYDPDLDF 59
Query: 392 AMRIF 406
RIF
Sbjct: 60 HYRIF 64
Score = 34.7 bits (78), Expect(2) = 8e-10
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE E CGNG RC
Sbjct: 64 FNADGSEVEQCGNGARC 80
[219][TOP]
>UniRef100_A1SAP5 Diaminopimelate epimerase n=1 Tax=Shewanella amazonensis SB2B
RepID=DAPF_SHEAM
Length = 275
Score = 52.0 bits (123), Expect(2) = 8e-10
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVN-GTDY 391
++HF K HGLGNDF++VD + + EQ +L DRNFG+G D ++ P + D+
Sbjct: 1 MIHFTKMHGLGNDFMVVDG-VTQNVFFSPEQIRRLADRNFGIGFDQLLLVEPPYDPDLDF 59
Query: 392 AMRIF 406
RIF
Sbjct: 60 HYRIF 64
Score = 34.7 bits (78), Expect(2) = 8e-10
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE E CGNG RC
Sbjct: 64 FNADGSEVEQCGNGARC 80
[220][TOP]
>UniRef100_B1A1I6 Diaminopimelate epimerase (Fragment) n=1 Tax=Flammeovirga
yaeyamensis RepID=B1A1I6_9SPHI
Length = 205
Score = 57.0 bits (136), Expect(2) = 8e-10
Identities = 25/48 (52%), Positives = 34/48 (70%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVI 358
++HF KY G GNDFI++D+RD++ E+ A LC R FGVG DG+I
Sbjct: 1 MIHFWKYQGAGNDFIMIDDRDATFDINDHEKVAFLCHRRFGVGGDGLI 48
Score = 29.6 bits (65), Expect(2) = 8e-10
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
+FN+DG MCGNG RC
Sbjct: 62 YFNADGHVGTMCGNGGRC 79
[221][TOP]
>UniRef100_Q31AX3 Diaminopimelate epimerase n=1 Tax=Prochlorococcus marinus str. MIT
9312 RepID=Q31AX3_PROM9
Length = 286
Score = 48.1 bits (113), Expect(2) = 1e-09
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAA----KLCDRNFGVGADGVIFAMPGVNGT 385
++F KY G GNDF+++D+R + K + ++C+R FG+GADGVIF + N
Sbjct: 4 INFEKYQGNGNDFVVIDSRGNDLYKNYKSNKIFDIKQICNRQFGIGADGVIF-IEEPNED 62
Query: 386 DYAMRI 403
+YA I
Sbjct: 63 NYAKMI 68
Score = 38.1 bits (87), Expect(2) = 1e-09
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSE +MCGNG+RC
Sbjct: 70 FNSDGSEAQMCGNGIRC 86
[222][TOP]
>UniRef100_C9RS69 Diaminopimelate epimerase n=1 Tax=Fibrobacter succinogenes subsp.
succinogenes S85 RepID=C9RS69_FIBSU
Length = 284
Score = 53.9 bits (128), Expect(2) = 1e-09
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 21/84 (25%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAA-KLCDRNFGVGADGVIFAMP-------- 370
++F K+ GLGNDF+L++ +S + EQ KLCDR FG+GADGV+ P
Sbjct: 1 MNFSKWTGLGNDFVLLEPGESLDFSSGFEQRIIKLCDRRFGIGADGVVVVTPMDGDGCLV 60
Query: 371 --GV----------NGTDYAMRIF 406
G+ NG D+ MRIF
Sbjct: 61 LNGISEGPVSKAVANGVDFEMRIF 84
Score = 32.3 bits (72), Expect(2) = 1e-09
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE MCGN RC
Sbjct: 84 FNADGSEAAMCGNATRC 100
[223][TOP]
>UniRef100_Q3Z8H4 Diaminopimelate epimerase n=1 Tax=Dehalococcoides ethenogenes 195
RepID=Q3Z8H4_DEHE1
Length = 284
Score = 50.4 bits (119), Expect(2) = 1e-09
Identities = 25/63 (39%), Positives = 37/63 (58%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F K +GNDF+L+D + E K + A +C R+FG GADG++ +P D+ M
Sbjct: 1 MKFTKLQSVGNDFVLIDPQ--GEDKDWSKLALHMCHRHFGAGADGLMLILPSAK-ADFRM 57
Query: 398 RIF 406
RIF
Sbjct: 58 RIF 60
Score = 35.8 bits (81), Expect(2) = 1e-09
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE E+CGNG+RC
Sbjct: 60 FNADGSEAEICGNGLRC 76
[224][TOP]
>UniRef100_C0GM64 Diaminopimelate epimerase n=1 Tax=Desulfonatronospira thiodismutans
ASO3-1 RepID=C0GM64_9DELT
Length = 284
Score = 49.7 bits (117), Expect(2) = 1e-09
Identities = 28/63 (44%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSSEP-KITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYAM 397
F K G GNDFIL DN + P ++ A LC R FG+GADG+IF P G D+
Sbjct: 11 FFKMQGSGNDFILWDNTSLNLPGELMSRWAETLCPRGFGIGADGMIFLDNPRTQGHDFDW 70
Query: 398 RIF 406
F
Sbjct: 71 HFF 73
Score = 36.6 bits (83), Expect(2) = 1e-09
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
FFN+DGS EMCGNG RC
Sbjct: 72 FFNADGSRAEMCGNGSRC 89
[225][TOP]
>UniRef100_A6TRX5 Diaminopimelate epimerase n=1 Tax=Alkaliphilus metalliredigens QYMF
RepID=DAPF_ALKMQ
Length = 283
Score = 44.3 bits (103), Expect(2) = 1e-09
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVI 358
+ F K HG GNDFI++ D + + A ++C R+FG+GADG++
Sbjct: 3 IKFKKMHGTGNDFIMIYYEDYPFEQHFNQLAKEVCHRHFGIGADGLM 49
Score = 42.0 bits (97), Expect(2) = 1e-09
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +3
Query: 369 QESMVLITQCGFFNSDGSEPEMCGNGVRC 455
+ES V Q +FNSDGSE MCGNG+RC
Sbjct: 52 KESSVADVQMKYFNSDGSEAGMCGNGIRC 80
[226][TOP]
>UniRef100_C6J2A7 Diaminopimelate epimerase n=1 Tax=Paenibacillus sp. oral taxon 786
str. D14 RepID=C6J2A7_9BACL
Length = 278
Score = 54.7 bits (130), Expect(2) = 1e-09
Identities = 29/62 (46%), Positives = 37/62 (59%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F K HGLGNDF LV + P E A + CDR FGVG DG++F +P + D+ M
Sbjct: 1 MEFTKMHGLGNDF-LVFYGEQQLPDNVSELAIRWCDRYFGVGGDGLVFILPS-DKADFKM 58
Query: 398 RI 403
RI
Sbjct: 59 RI 60
Score = 31.6 bits (70), Expect(2) = 1e-09
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 408 NSDGSEPEMCGNGVRC 455
NSDG+E E CGN +RC
Sbjct: 62 NSDGTEAEQCGNAIRC 77
[227][TOP]
>UniRef100_B9M4N3 Diaminopimelate epimerase n=1 Tax=Geobacter sp. FRC-32
RepID=B9M4N3_GEOSF
Length = 278
Score = 47.0 bits (110), Expect(2) = 1e-09
Identities = 25/63 (39%), Positives = 38/63 (60%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F K HG GND++ VD S + + + A K+ +RNFG+G+DG+I MP + M
Sbjct: 1 MKFTKMHGAGNDYVYVDCF-SEQVENPADVAIKVSNRNFGIGSDGLILIMPS-DKAHVRM 58
Query: 398 RIF 406
R+F
Sbjct: 59 RMF 61
Score = 39.3 bits (90), Expect(2) = 1e-09
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSE EMCGNG+RC
Sbjct: 61 FNSDGSESEMCGNGIRC 77
[228][TOP]
>UniRef100_C4FN33 Putative uncharacterized protein n=1 Tax=Veillonella dispar ATCC
17748 RepID=C4FN33_9FIRM
Length = 277
Score = 49.3 bits (116), Expect(2) = 1e-09
Identities = 26/62 (41%), Positives = 36/62 (58%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ K HGLGNDFIL + + T + A +LCDR G+GADG++ +P + D M
Sbjct: 1 MKLTKMHGLGNDFILFADPQGANKDYT-DLAIRLCDRRTGIGADGLVIVVPS-DTCDVRM 58
Query: 398 RI 403
RI
Sbjct: 59 RI 60
Score = 37.0 bits (84), Expect(2) = 1e-09
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 408 NSDGSEPEMCGNGVRC 455
NSDGSE EMCGNG+RC
Sbjct: 62 NSDGSEAEMCGNGIRC 77
[229][TOP]
>UniRef100_A6CHG3 Diaminopimelate epimerase n=1 Tax=Bacillus sp. SG-1
RepID=A6CHG3_9BACI
Length = 330
Score = 50.4 bits (119), Expect(2) = 1e-09
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSS---EPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTD 388
++ +K HG GNDF+L+D + K Q A LCDR G+GADG++F + + D
Sbjct: 3 INLIKCHGSGNDFLLIDEITETYNFSEKDRQNLAIALCDRKKGIGADGILFVLDS-DRCD 61
Query: 389 YAMRIF 406
MR+F
Sbjct: 62 GKMRVF 67
Score = 35.4 bits (80), Expect(2) = 1e-09
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE MCGNG+RC
Sbjct: 67 FNADGSEASMCGNGLRC 83
[230][TOP]
>UniRef100_A6UN47 Diaminopimelate epimerase n=1 Tax=Methanococcus vannielii SB
RepID=A6UN47_METVS
Length = 292
Score = 48.9 bits (115), Expect(2) = 1e-09
Identities = 27/74 (36%), Positives = 42/74 (56%)
Frame = +2
Query: 185 ASFLDKKETGVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA 364
+S L K V+ F K HGLGND+I + N + K E + + DR+FG+G+DG++
Sbjct: 5 SSILPKNSDKVVKFTKMHGLGNDYIYI-NAVLEDIKNPNEFSKFVSDRHFGIGSDGLVLI 63
Query: 365 MPGVNGTDYAMRIF 406
+ D+ MR+F
Sbjct: 64 LDS-KIADFKMRMF 76
Score = 37.0 bits (84), Expect(2) = 1e-09
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSE EMCGN +RC
Sbjct: 76 FNSDGSEAEMCGNAIRC 92
[231][TOP]
>UniRef100_C5AEZ7 Diaminopimelate epimerase n=1 Tax=Burkholderia glumae BGR1
RepID=C5AEZ7_BURGB
Length = 288
Score = 54.3 bits (129), Expect(2) = 1e-09
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYA 394
L F K HG GNDF+++D + + +T E+ L DR+FGVGAD V+ P ++G D+
Sbjct: 3 LPFTKMHGAGNDFVVLDGT-AGDLGLTPERVRALADRHFGVGADQVLLVERPTLDGADFR 61
Query: 395 MRIF 406
RIF
Sbjct: 62 YRIF 65
Score = 31.6 bits (70), Expect(2) = 1e-09
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 65 FNCDGGEVEHCGNGARC 81
[232][TOP]
>UniRef100_A5UMZ9 Diaminopimelate epimerase, DapF n=1 Tax=Methanobrevibacter smithii
ATCC 35061 RepID=A5UMZ9_METS3
Length = 286
Score = 48.5 bits (114), Expect(2) = 1e-09
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSE--PKITQEQAAK-LCDRNFGVGADGVIFAMPGVNGTD 388
L F K HG+GNDF ++ N + E P+ + +A + LC R+FGVG DGV+F P + D
Sbjct: 6 LKFSKMHGIGNDFPII-NESAGEVIPEADKAEACRFLCHRHFGVGGDGVLFVTPS-DVAD 63
Query: 389 YAMRIF 406
R+F
Sbjct: 64 IGYRMF 69
Score = 37.4 bits (85), Expect(2) = 1e-09
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DGSE EMCGNG+RC
Sbjct: 69 FNPDGSEAEMCGNGIRC 85
[233][TOP]
>UniRef100_A6NZA1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus
ATCC 29799 RepID=A6NZA1_9BACE
Length = 280
Score = 50.4 bits (119), Expect(2) = 1e-09
Identities = 28/63 (44%), Positives = 36/63 (57%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F K GLGND++ + N P E A +L DR+FGVGADG+I P D+ M
Sbjct: 1 MRFTKMQGLGNDYVYL-NCTGGLPDNLPELAVRLSDRHFGVGADGLICICPS-ERADFGM 58
Query: 398 RIF 406
RIF
Sbjct: 59 RIF 61
Score = 35.4 bits (80), Expect(2) = 1e-09
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DGSE MCGNG+RC
Sbjct: 61 FNADGSEGAMCGNGIRC 77
[234][TOP]
>UniRef100_O29511 Diaminopimelate epimerase n=1 Tax=Archaeoglobus fulgidus
RepID=DAPF_ARCFU
Length = 280
Score = 47.8 bits (112), Expect(2) = 1e-09
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDN------RDSSEPKITQEQAAKLCDRNFGVGADGVIFAMP 370
F K HG GNDF+L+D + +P+ + +C RNFGVGADG +F P
Sbjct: 5 FTKMHGNGNDFVLIDEFEGVIVGEEEKPRFVRA----VCHRNFGVGADGALFVQP 55
Score = 38.1 bits (87), Expect(2) = 1e-09
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
+FNSDGSE MCGNG+RC
Sbjct: 65 YFNSDGSEAAMCGNGIRC 82
[235][TOP]
>UniRef100_Q39ZZ8 Diaminopimelate epimerase n=1 Tax=Pelobacter carbinolicus DSM 2380
RepID=Q39ZZ8_PELCD
Length = 279
Score = 46.6 bits (109), Expect(2) = 1e-09
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVD--NRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDY 391
+ F K HG GND++ V+ + +P E A K+ +RNFG+G+DG+I +P D
Sbjct: 1 MKFAKMHGAGNDYVYVNCFEQTIDDPA---EMARKVSNRNFGIGSDGLILILPS-EVADV 56
Query: 392 AMRIF 406
MR+F
Sbjct: 57 RMRMF 61
Score = 39.3 bits (90), Expect(2) = 1e-09
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSE EMCGNG+RC
Sbjct: 61 FNSDGSESEMCGNGIRC 77
[236][TOP]
>UniRef100_Q2FSY3 Diaminopimelate epimerase n=1 Tax=Methanospirillum hungatei JF-1
RepID=Q2FSY3_METHJ
Length = 274
Score = 53.9 bits (128), Expect(2) = 1e-09
Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSSEPKITQEQ----AAKLCDRNFGVGADGVIFAMPGVNGTDY 391
FVK HG GNDFIL+D + + KI + AA CDR FG+G DGV+F + +G
Sbjct: 5 FVKLHGNGNDFILID--EYAGEKIPDDMKGHFAAVYCDRKFGIGGDGVLFLLKSNDG--I 60
Query: 392 AMRIFQ 409
MR+FQ
Sbjct: 61 RMRLFQ 66
Score = 32.0 bits (71), Expect(2) = 1e-09
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
F D SE EMCGNG+RC
Sbjct: 65 FQPDESEAEMCGNGIRC 81
[237][TOP]
>UniRef100_Q6ME33 Putative diaminopimelate epimerase n=1 Tax=Candidatus
Protochlamydia amoebophila UWE25 RepID=Q6ME33_PARUW
Length = 269
Score = 47.8 bits (112), Expect(2) = 1e-09
Identities = 24/45 (53%), Positives = 29/45 (64%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVI 358
F KY G GNDFIL DNR+ P + +LC R +GVGADG+I
Sbjct: 5 FTKYVGCGNDFILFDNRNGKFP-FSIPLIQQLCHRQWGVGADGII 48
Score = 38.1 bits (87), Expect(2) = 1e-09
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +3
Query: 369 QESMVLITQCGFFNSDGSEPEMCGNGVRC 455
+ S + + FN+DGSE EMCGNG+RC
Sbjct: 51 ENSTIAHARMRIFNADGSEAEMCGNGLRC 79
[238][TOP]
>UniRef100_A4CLX3 Diaminopimelate epimerase n=1 Tax=Robiginitalea biformata HTCC2501
RepID=A4CLX3_9FLAO
Length = 257
Score = 54.3 bits (129), Expect(2) = 1e-09
Identities = 28/61 (45%), Positives = 33/61 (54%)
Frame = +2
Query: 224 FVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRI 403
F KY GNDFIL+DNR P A LC R FG+GADG+I + G D+ M
Sbjct: 5 FYKYQATGNDFILIDNRLGGFPGNDSSHIANLCHRRFGIGADGLIL-LENDPGADFRMVY 63
Query: 404 F 406
F
Sbjct: 64 F 64
Score = 31.6 bits (70), Expect(2) = 1e-09
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
+FNSDG MCGNG RC
Sbjct: 63 YFNSDGRPGSMCGNGGRC 80
[239][TOP]
>UniRef100_Q1WTU5 Diaminopimelate epimerase n=2 Tax=Lactobacillus salivarius
RepID=DAPF_LACS1
Length = 325
Score = 55.1 bits (131), Expect(2) = 2e-09
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 6/68 (8%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQ----AAKLCDRNFGV--GADGVIFAMPGVN 379
+ +K HG GNDF ++D + EP +T+E+ A K+CDR+ G+ GADGV++ G
Sbjct: 1 MEMLKVHGSGNDFFILDEDNLEEP-LTEEELIQLAQKVCDRDTGLHGGADGVLYVQAGHE 59
Query: 380 GTDYAMRI 403
GTD MR+
Sbjct: 60 GTDGRMRV 67
Score = 30.4 bits (67), Expect(2) = 2e-09
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 408 NSDGSEPEMCGNGVR 452
N+DGSE MCGNG+R
Sbjct: 69 NADGSEASMCGNGIR 83
[240][TOP]
>UniRef100_Q2NE08 DapF n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NE08_METST
Length = 292
Score = 46.2 bits (108), Expect(2) = 2e-09
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAK-----LCDRNFGVGADGVIFAMPGVNG 382
+ F K H LGND+I+++ +E ++ E+A +C R F VG+DGVIFA +
Sbjct: 5 IEFTKMHALGNDYIVINE---TETEVIPEEAKNKLSNDICTRRFSVGSDGVIFACKS-DK 60
Query: 383 TDYAMRIF 406
+D RIF
Sbjct: 61 SDVRFRIF 68
Score = 39.3 bits (90), Expect(2) = 2e-09
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSE EMCGNG+RC
Sbjct: 68 FNSDGSEAEMCGNGIRC 84
[241][TOP]
>UniRef100_A6G1D2 Diaminopimelate epimerase n=1 Tax=Plesiocystis pacifica SIR-1
RepID=A6G1D2_9DELT
Length = 286
Score = 49.3 bits (116), Expect(2) = 2e-09
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQ------EQAAKLCDRNFGVGADGVIFAMPG 373
L FVK GL NDF++VD RD+ + + E A ++CDR GVG DG++ PG
Sbjct: 10 LPFVKVEGLSNDFLVVDLRDAGPAVLDETVAWAREHAPRVCDRRRGVGGDGLLLIGPG 67
Score = 36.2 bits (82), Expect(2) = 2e-09
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 408 NSDGSEPEMCGNGVRC 455
N+DGS PEMCGNG+RC
Sbjct: 80 NADGSRPEMCGNGLRC 95
[242][TOP]
>UniRef100_B1YPQ6 Diaminopimelate epimerase n=1 Tax=Burkholderia ambifaria MC40-6
RepID=B1YPQ6_BURA4
Length = 282
Score = 53.9 bits (128), Expect(2) = 2e-09
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +2
Query: 236 HGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYAMRIF 406
HG GNDF+++D + P +T+ Q L +R+FG+GAD ++ P V+G D+ RIF
Sbjct: 2 HGAGNDFVVLDGYSRALPPLTEAQVRALANRHFGIGADQLLLVEKPTVDGADFKYRIF 59
Score = 31.6 bits (70), Expect(2) = 2e-09
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 59 FNCDGGEVEHCGNGARC 75
[243][TOP]
>UniRef100_B1TAX6 Diaminopimelate epimerase n=1 Tax=Burkholderia ambifaria MEX-5
RepID=B1TAX6_9BURK
Length = 282
Score = 53.9 bits (128), Expect(2) = 2e-09
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +2
Query: 236 HGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFA-MPGVNGTDYAMRIF 406
HG GNDF+++D + P +T+ Q L +R+FG+GAD ++ P V+G D+ RIF
Sbjct: 2 HGAGNDFVVLDGYSRALPPLTEAQVRALANRHFGIGADQLLLVEKPTVDGADFKYRIF 59
Score = 31.6 bits (70), Expect(2) = 2e-09
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN DG E E CGNG RC
Sbjct: 59 FNCDGGEVEHCGNGARC 75
[244][TOP]
>UniRef100_B1KQD0 Diaminopimelate epimerase n=1 Tax=Shewanella woodyi ATCC 51908
RepID=DAPF_SHEWM
Length = 279
Score = 52.4 bits (124), Expect(2) = 2e-09
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +2
Query: 215 VLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVN-GTDY 391
++HF K HGLGNDF++VD + + EQ +L DRNFGVG D ++ P + D+
Sbjct: 1 MIHFAKMHGLGNDFMVVDG-VTQNVFFSPEQIKRLADRNFGVGFDQLLLVEPPYDPDLDF 59
Query: 392 AMRIF 406
RIF
Sbjct: 60 HYRIF 64
Score = 33.1 bits (74), Expect(2) = 2e-09
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FN+DG E E CGNG RC
Sbjct: 64 FNADGGEVEQCGNGARC 80
[245][TOP]
>UniRef100_Q6LYS1 Diaminopimelate epimerase n=1 Tax=Methanococcus maripaludis
RepID=DAPF_METMP
Length = 277
Score = 48.5 bits (114), Expect(2) = 2e-09
Identities = 25/63 (39%), Positives = 40/63 (63%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F K HGLGND+I VD S + + E + + DR+FG+G+DG++ +P + D+ M
Sbjct: 1 MKFTKMHGLGNDYIYVD-AISQKIENPNEISKFVSDRHFGIGSDGLVLILPS-DVADFKM 58
Query: 398 RIF 406
R+F
Sbjct: 59 RMF 61
Score = 37.0 bits (84), Expect(2) = 2e-09
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSE EMCGN +RC
Sbjct: 61 FNSDGSEAEMCGNAIRC 77
[246][TOP]
>UniRef100_A6VFK8 Diaminopimelate epimerase n=1 Tax=Methanococcus maripaludis C7
RepID=DAPF_METM7
Length = 277
Score = 48.5 bits (114), Expect(2) = 2e-09
Identities = 25/63 (39%), Positives = 39/63 (61%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F K HGLGND+I VD S + + E + + DR+FG+G+DG++ +P D+ M
Sbjct: 1 MKFTKMHGLGNDYIYVD-ATSQKIENPNEISRFVSDRHFGIGSDGLVLILPS-EIADFKM 58
Query: 398 RIF 406
R+F
Sbjct: 59 RMF 61
Score = 37.0 bits (84), Expect(2) = 2e-09
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSE EMCGN +RC
Sbjct: 61 FNSDGSEAEMCGNAIRC 77
[247][TOP]
>UniRef100_A4FXV0 Diaminopimelate epimerase n=1 Tax=Methanococcus maripaludis C5
RepID=DAPF_METM5
Length = 277
Score = 48.5 bits (114), Expect(2) = 2e-09
Identities = 25/63 (39%), Positives = 40/63 (63%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAM 397
+ F K HGLGND+I VD S + + E + + DR+FG+G+DG++ +P + D+ M
Sbjct: 1 MKFTKMHGLGNDYIYVD-AISQKIENPNEISKFVSDRHFGIGSDGLVLILPS-DVADFKM 58
Query: 398 RIF 406
R+F
Sbjct: 59 RMF 61
Score = 37.0 bits (84), Expect(2) = 2e-09
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
FNSDGSE EMCGN +RC
Sbjct: 61 FNSDGSEAEMCGNAIRC 77
[248][TOP]
>UniRef100_A2SQX8 Diaminopimelate epimerase n=1 Tax=Methanocorpusculum labreanum Z
RepID=A2SQX8_METLZ
Length = 274
Score = 52.8 bits (125), Expect(2) = 2e-09
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 200 KKETGVLHFVKYHGLGNDFILVDNRDS--SEPKITQEQAAKLCDRNFGVGADGVIFAMPG 373
K + + F K HG GNDFIL+D D + + A CDR FG+G DGV+F
Sbjct: 7 KHDLRSIAFTKLHGNGNDFILIDEMDQVIIPDDMKAQFAVVYCDRRFGIGGDGVLFISKS 66
Query: 374 VNGTDYAMRIFQ 409
+ D MR+FQ
Sbjct: 67 -DKADIRMRLFQ 77
Score = 32.7 bits (73), Expect(2) = 2e-09
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 405 FNSDGSEPEMCGNGVRC 455
F D SE EMCGNG+RC
Sbjct: 76 FQPDASEAEMCGNGIRC 92
[249][TOP]
>UniRef100_Q5FQZ4 Diaminopimelate epimerase n=1 Tax=Gluconobacter oxydans
RepID=DAPF_GLUOX
Length = 257
Score = 55.1 bits (131), Expect(2) = 2e-09
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADG-VIFAMPGVNGTDYA 394
L F K HGLGNDF+++D R ++P + LCDR FG+G D V+ P + G D
Sbjct: 3 LSFTKMHGLGNDFVVIDGR-QNDPALETATIRHLCDRRFGIGCDQLVLLTPPTLAGADVH 61
Query: 395 MRIF 406
+R F
Sbjct: 62 VRFF 65
Score = 30.4 bits (67), Expect(2) = 2e-09
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
FFN DGSE CGN RC
Sbjct: 64 FFNPDGSEAGACGNASRC 81
[250][TOP]
>UniRef100_C1ZR66 Diaminopimelate epimerase n=1 Tax=Rhodothermus marinus DSM 4252
RepID=C1ZR66_RHOMR
Length = 292
Score = 52.8 bits (125), Expect(2) = 2e-09
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Frame = +2
Query: 206 ETGVLHFVKYHGLGNDFILVDNR-DSSEPKITQEQAAKLCDRNFGVGADGVI-FAMPGVN 379
+T VL F K +G GNDF+++DNR + + E A + C R FG+GADG++ A P
Sbjct: 3 KTLVLEFTKMNGAGNDFVVLDNRFYAFSDEELAELARRYCRRRFGIGADGLLALAPPRQP 62
Query: 380 GTDYAMRIF 406
T Y MR F
Sbjct: 63 DTHYRMRYF 71
Score = 32.3 bits (72), Expect(2) = 2e-09
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 402 FFNSDGSEPEMCGNGVRC 455
+FN+DGS MCGNG RC
Sbjct: 70 YFNADGSLGTMCGNGARC 87