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[1][TOP]
>UniRef100_P56762 DNA-directed RNA polymerase subunit alpha n=1 Tax=Arabidopsis
thaliana RepID=RPOA_ARATH
Length = 329
Score = 189 bits (479), Expect = 1e-46
Identities = 89/95 (93%), Positives = 91/95 (95%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
KMSNNFEDRSYP+DAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALH+AS
Sbjct: 160 KMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHQAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLIN FIPF HVEEET YLENNQHQVTLPFFPFH
Sbjct: 220 RNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFH 254
[2][TOP]
>UniRef100_A4QJW3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Olimarabidopsis
pumila RepID=RPOA_OLIPU
Length = 327
Score = 187 bits (476), Expect = 2e-46
Identities = 88/95 (92%), Positives = 91/95 (95%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
KMSNNFEDRSYP+DAVFMPV+NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLIN FIPF HVEEET+YLENNQHQVTLPFFPFH
Sbjct: 220 RNLINLFIPFLHVEEETVYLENNQHQVTLPFFPFH 254
[3][TOP]
>UniRef100_A4QKM4 DNA-directed RNA polymerase subunit alpha n=1 Tax=Capsella
bursa-pastoris RepID=RPOA_CAPBU
Length = 327
Score = 187 bits (475), Expect = 3e-46
Identities = 88/95 (92%), Positives = 90/95 (94%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
KMSNNFEDRSYP+DAVFMPV+NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLIN FIPF HVEEET YLENNQHQVTLPFFPFH
Sbjct: 220 RNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFH 254
[4][TOP]
>UniRef100_A4QLW5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nasturtium
officinale RepID=RPOA_NASOF
Length = 327
Score = 185 bits (469), Expect = 2e-45
Identities = 87/95 (91%), Positives = 89/95 (93%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
KMSNNFEDRSYP+DAVFMPV+NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLIN FIPF HVEEET YLENNQHQVTLP FPFH
Sbjct: 220 RNLINLFIPFLHVEEETFYLENNQHQVTLPLFPFH 254
[5][TOP]
>UniRef100_A4QLM6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lobularia
maritima RepID=RPOA_LOBMA
Length = 327
Score = 185 bits (469), Expect = 2e-45
Identities = 87/95 (91%), Positives = 89/95 (93%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
KMSNNFEDRSYP+DAVFMPV+NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLIN FIPF HVEEET YLENNQHQVTLP FPFH
Sbjct: 220 RNLINLFIPFLHVEEETFYLENNQHQVTLPLFPFH 254
[6][TOP]
>UniRef100_A4QLD8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lepidium
virginicum RepID=RPOA_LEPVR
Length = 327
Score = 185 bits (469), Expect = 2e-45
Identities = 87/95 (91%), Positives = 89/95 (93%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
KMSNNFEDRSYP+DAVFMPV+NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLIN FIPF HVEEET YLENNQHQVTLP FPFH
Sbjct: 220 RNLINLFIPFLHVEEETFYLENNQHQVTLPLFPFH 254
[7][TOP]
>UniRef100_A4QKD7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Barbarea verna
RepID=RPOA_BARVE
Length = 327
Score = 185 bits (469), Expect = 2e-45
Identities = 87/95 (91%), Positives = 89/95 (93%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
KMSNNFEDRSYP+DAVFMPV+NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLIN FIPF HVEEET YLENNQHQVTLP FPFH
Sbjct: 220 RNLINLFIPFLHVEEETFYLENNQHQVTLPLFPFH 254
[8][TOP]
>UniRef100_A4QKW3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Crucihimalaya
wallichii RepID=RPOA_CRUWA
Length = 327
Score = 183 bits (465), Expect = 4e-45
Identities = 86/95 (90%), Positives = 89/95 (93%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K+SNN EDRSYP+DAVFMPV+NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KISNNLEDRSYPIDAVFMPVQNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLIN FIPF HVEEET YLENNQHQVTLPFFPFH
Sbjct: 220 RNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFH 254
[9][TOP]
>UniRef100_Q9XQN8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Sinapis alba
RepID=RPOA_SINAL
Length = 327
Score = 181 bits (460), Expect = 2e-44
Identities = 85/95 (89%), Positives = 89/95 (93%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
KMSNNFEDRSYP+DAVFMPV+NANHSIHSYGNGNEKQEILF+EIWTNGSLTPKEAL+ AS
Sbjct: 160 KMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEKQEILFIEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLIN FIPF HVEEET YLENNQHQVTLP FPFH
Sbjct: 220 RNLINLFIPFLHVEEETFYLENNQHQVTLPVFPFH 254
[10][TOP]
>UniRef100_A4QL51 DNA-directed RNA polymerase subunit alpha n=1 Tax=Draba nemorosa
RepID=RPOA_DRANE
Length = 327
Score = 180 bits (457), Expect = 4e-44
Identities = 85/95 (89%), Positives = 88/95 (92%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
KMSNNFEDRSYP+DAVFMPV+NANHSIHSYGNGN KQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNGKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLIN FIPF HVEEET +LENNQHQVTLP FPFH
Sbjct: 220 RNLINLFIPFLHVEEETFHLENNQHQVTLPLFPFH 254
[11][TOP]
>UniRef100_A4QK50 DNA-directed RNA polymerase subunit alpha n=1 Tax=Arabis hirsuta
RepID=RPOA_ARAHI
Length = 337
Score = 174 bits (441), Expect = 3e-42
Identities = 82/95 (86%), Positives = 85/95 (89%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K+ N FEDRSYP+DAVFMPV+NANHSIHSYGNGN KQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KILNTFEDRSYPIDAVFMPVQNANHSIHSYGNGNGKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLIN FIPF HVEEET YLENNQH VTLP FPFH
Sbjct: 220 RNLINLFIPFLHVEEETFYLENNQHHVTLPLFPFH 254
[12][TOP]
>UniRef100_A4QJE7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Aethionema
cordifolium RepID=RPOA_AETCO
Length = 333
Score = 172 bits (436), Expect = 1e-41
Identities = 80/95 (84%), Positives = 86/95 (90%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
KM N+FED SYP+DA+FMPV+NANHSIHSYG GNEKQEILFLEIWTNG+LTPKEALH AS
Sbjct: 160 KMPNHFEDGSYPIDALFMPVQNANHSIHSYGTGNEKQEILFLEIWTNGNLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLIN FIPF HVEEET YLENNQH+VTLP FPFH
Sbjct: 220 RNLINLFIPFLHVEEETFYLENNQHKVTLPLFPFH 254
[13][TOP]
>UniRef100_B1A967 RNA polymerase alpha chain n=1 Tax=Carica papaya RepID=B1A967_CARPA
Length = 327
Score = 171 bits (434), Expect = 2e-41
Identities = 80/95 (84%), Positives = 84/95 (88%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NNF+D SYP+DAVFMPV+NANHSIHSYG GNEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KTPNNFQDGSYPIDAVFMPVQNANHSIHSYGTGNEKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLIN FIPF H EEE YLENNQH+VTLPFFPFH
Sbjct: 220 RNLINLFIPFLHAEEEKFYLENNQHKVTLPFFPFH 254
[14][TOP]
>UniRef100_A4QJN1 DNA-directed RNA polymerase subunit alpha n=1 Tax=Aethionema
grandiflorum RepID=RPOA_AETGR
Length = 333
Score = 164 bits (416), Expect = 2e-39
Identities = 77/95 (81%), Positives = 83/95 (87%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
KM N FED SYP+DA+FMPV+NANHSIHSYG GNE QEILFLEIWTNG+LTPKEALH AS
Sbjct: 160 KMPNPFEDGSYPIDALFMPVQNANHSIHSYGTGNENQEILFLEIWTNGNLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLIN FIPF HVEEET YLENN+ +VTLP FPFH
Sbjct: 220 RNLINLFIPFLHVEEETFYLENNEDKVTLPLFPFH 254
[15][TOP]
>UniRef100_Q49KW6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Eucalyptus
globulus subsp. globulus RepID=RPOA_EUCGG
Length = 337
Score = 163 bits (413), Expect = 5e-39
Identities = 77/95 (81%), Positives = 83/95 (87%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NF+D SYP+DAVFMPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KTPKNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EEE L+LENNQ++VTLPFF FH
Sbjct: 220 RNLIDLFIPFLHAEEENLHLENNQYKVTLPFFTFH 254
[16][TOP]
>UniRef100_B5AH30 RNA polymerase alpha subunit n=1 Tax=Gonystylus bancanus
RepID=B5AH30_9ROSI
Length = 329
Score = 163 bits (412), Expect = 6e-39
Identities = 76/95 (80%), Positives = 81/95 (85%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NNF D SYP+D VFMPV N NHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 162 KTPNNFHDGSYPIDVVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEAS 221
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EEE +LEN+QH+VTLPFFPFH
Sbjct: 222 RNLIDLFIPFLHAEEENSHLENSQHKVTLPFFPFH 256
[17][TOP]
>UniRef100_Q2L938 DNA-directed RNA polymerase subunit alpha n=1 Tax=Gossypium
hirsutum RepID=RPOA_GOSHI
Length = 329
Score = 163 bits (412), Expect = 6e-39
Identities = 77/95 (81%), Positives = 80/95 (84%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NF D SYP+DAVFMPV NANHSIH YGN NEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 162 KTPKNFHDGSYPIDAVFMPVRNANHSIHCYGNDNEKQEILFLEIWTNGSLTPKEALHEAS 221
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EEE L+LENNQH VTLPFFPFH
Sbjct: 222 RNLIDLFIPFLHTEEENLHLENNQHDVTLPFFPFH 256
[18][TOP]
>UniRef100_C0LEA6 RpoA n=1 Tax=Jatropha curcas RepID=C0LEA6_9ROSI
Length = 339
Score = 162 bits (410), Expect = 1e-38
Identities = 76/95 (80%), Positives = 83/95 (87%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K +NNF+D SYP+DAVFMPV NANHS+HSYGNGNEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KPTNNFQDGSYPIDAVFMPVRNANHSVHSYGNGNEKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EEE L+LE NQH+VTLP F FH
Sbjct: 220 RNLIDLFIPFLHAEEENLHLEINQHKVTLPLFTFH 254
[19][TOP]
>UniRef100_A7R909 Chromosome undetermined scaffold_3171, whole genome shotgun
sequence n=1 Tax=Vitis vinifera RepID=A7R909_VITVI
Length = 313
Score = 157 bits (397), Expect = 3e-37
Identities = 75/95 (78%), Positives = 81/95 (85%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NNF+D SYP+DAVFMPV NANHSIHSYGNGNE+QEILFLEIWTNGSLTPKEALH AS
Sbjct: 154 KRPNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNERQEILFLEIWTNGSLTPKEALHEAS 213
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EEETL+LE NQH+ TLP FH
Sbjct: 214 RNLIDLFIPFLHAEEETLHLEYNQHKSTLPPLTFH 248
[20][TOP]
>UniRef100_Q0ZIY7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Vitis vinifera
RepID=RPOA_VITVI
Length = 331
Score = 157 bits (397), Expect = 3e-37
Identities = 75/95 (78%), Positives = 81/95 (85%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NNF+D SYP+DAVFMPV NANHSIHSYGNGNE+QEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KRPNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNERQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EEETL+LE NQH+ TLP FH
Sbjct: 220 RNLIDLFIPFLHAEEETLHLEYNQHKSTLPPLTFH 254
[21][TOP]
>UniRef100_Q68RX5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Panax ginseng
RepID=RPOA_PANGI
Length = 353
Score = 156 bits (395), Expect = 6e-37
Identities = 74/93 (79%), Positives = 81/93 (87%)
Frame = -2
Query: 281 SNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGN 102
+NNF+D SYP+DAVFMPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALH+AS N
Sbjct: 163 NNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHQASRN 222
Query: 101 LIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
LI+ FIPF H EEE L+L +NQH V LP F FH
Sbjct: 223 LIDLFIPFLHTEEENLHLADNQHTVPLPPFTFH 255
[22][TOP]
>UniRef100_Q14FC5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Populus alba
RepID=RPOA_POPAL
Length = 339
Score = 155 bits (393), Expect = 1e-36
Identities = 72/95 (75%), Positives = 80/95 (84%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NF+D SY +DAVFMPV NANHS+HSYGNGNEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KPPKNFQDGSYSIDAVFMPVRNANHSVHSYGNGNEKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EEE+ +LE NQH++TLP F FH
Sbjct: 220 RNLIDLFIPFLHAEEESFHLEKNQHKITLPLFAFH 254
[23][TOP]
>UniRef100_A4GYU3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Populus
trichocarpa RepID=RPOA_POPTR
Length = 339
Score = 155 bits (392), Expect = 1e-36
Identities = 72/95 (75%), Positives = 79/95 (83%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NF+D SY +DAVFMPV NANHS+HSYGNGNEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KPPKNFQDGSYSIDAVFMPVRNANHSVHSYGNGNEKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EEE +LE NQH++TLP F FH
Sbjct: 220 RNLIDLFIPFLHAEEENFHLEKNQHKITLPLFAFH 254
[24][TOP]
>UniRef100_Q33C00 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nicotiana
tomentosiformis RepID=RPOA_NICTO
Length = 337
Score = 155 bits (391), Expect = 2e-36
Identities = 73/95 (76%), Positives = 81/95 (85%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K +NF+D SYP+DAVFMPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KTPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H+EE+ LYL++NQH V L F FH
Sbjct: 220 RNLIDLFIPFLHIEEDNLYLQDNQHTVPLSPFTFH 254
[25][TOP]
>UniRef100_Q3C1M3 DNA-directed RNA polymerase subunit alpha n=2 Tax=Nicotiana
RepID=RPOA_NICSY
Length = 337
Score = 154 bits (389), Expect = 3e-36
Identities = 73/95 (76%), Positives = 81/95 (85%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K +NF+D SYP+DAVFMPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KTPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H+EE+ LYL++NQH V L F FH
Sbjct: 220 RNLIDLFIPFLHMEEDNLYLQDNQHTVPLSPFTFH 254
[26][TOP]
>UniRef100_Q09G14 DNA-directed RNA polymerase subunit alpha n=1 Tax=Platanus
occidentalis RepID=RPOA_PLAOC
Length = 337
Score = 154 bits (388), Expect = 4e-36
Identities = 73/95 (76%), Positives = 80/95 (84%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NN +D SYP+DAVFMPV NANHSIHSY NGNEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KTPNNSQDGSYPIDAVFMPVRNANHSIHSYANGNEKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H +EE + LE+NQ+ VTLPFF FH
Sbjct: 220 RNLIDLFIPFLHAQEENILLEDNQNGVTLPFFTFH 254
[27][TOP]
>UniRef100_Q0G9T0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Daucus carota
RepID=RPOA_DAUCA
Length = 353
Score = 154 bits (388), Expect = 4e-36
Identities = 73/93 (78%), Positives = 79/93 (84%)
Frame = -2
Query: 281 SNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGN 102
+NN +D SYP+DAVFMPV NANHSIHSYGNGN+KQEILFLEIWTNGSLTPKEALH AS N
Sbjct: 163 NNNSKDGSYPIDAVFMPVRNANHSIHSYGNGNDKQEILFLEIWTNGSLTPKEALHEASRN 222
Query: 101 LIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
LI+ FIPF H EEE L+L NNQH V LP F FH
Sbjct: 223 LIDLFIPFLHTEEENLHLANNQHMVPLPPFTFH 255
[28][TOP]
>UniRef100_Q8S8V9 DNA-directed RNA polymerase subunit alpha n=1 Tax=Atropa belladonna
RepID=RPOA_ATRBE
Length = 337
Score = 154 bits (388), Expect = 4e-36
Identities = 73/95 (76%), Positives = 80/95 (84%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NF+D SYP+DAVFMPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KTPQNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H+EE+ LYL++NQH V L F FH
Sbjct: 220 RNLIDLFIPFLHMEEDNLYLQDNQHTVPLSPFTFH 254
[29][TOP]
>UniRef100_B0Z4Q8 RNA polymerase alpha subunit n=2 Tax=Oenothera RepID=B0Z4Q8_OENAR
Length = 366
Score = 153 bits (387), Expect = 5e-36
Identities = 72/95 (75%), Positives = 79/95 (83%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NNF+D SYP+DAVFMPV NANHSIHSYGN NEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KSPNNFQDGSYPIDAVFMPVRNANHSIHSYGNQNEKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ F+PF H EEE L+L NN++ VT P F FH
Sbjct: 220 RNLIDLFLPFLHAEEENLHLGNNKYNVTFPLFTFH 254
[30][TOP]
>UniRef100_Q2MI69 DNA-directed RNA polymerase subunit alpha n=1 Tax=Solanum
lycopersicum RepID=RPOA_SOLLC
Length = 337
Score = 152 bits (385), Expect = 8e-36
Identities = 72/95 (75%), Positives = 81/95 (85%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K +NF+D SYP+DAVFMPV NANHSIHSYGNGNEKQEILF+EIWTNGSLTPKEALH AS
Sbjct: 160 KTPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFIEIWTNGSLTPKEALHDAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H+EE+ LYL++NQH V L F FH
Sbjct: 220 RNLIDLFIPFLHMEEDNLYLQDNQHTVPLSPFTFH 254
[31][TOP]
>UniRef100_Q2MIF6 DNA-directed RNA polymerase subunit alpha n=2 Tax=Solanum
RepID=RPOA_SOLBU
Length = 337
Score = 152 bits (385), Expect = 8e-36
Identities = 72/95 (75%), Positives = 81/95 (85%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K +NF+D SYP+DAVFMPV NANHSIHSYGNGNEKQEILF+EIWTNGSLTPKEALH AS
Sbjct: 160 KTPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFIEIWTNGSLTPKEALHDAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H+EE+ LYL++NQH V L F FH
Sbjct: 220 RNLIDLFIPFLHMEEDNLYLQDNQHTVPLSPFTFH 254
[32][TOP]
>UniRef100_Q09FS9 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nandina domestica
RepID=RPOA_NANDO
Length = 338
Score = 152 bits (385), Expect = 8e-36
Identities = 72/95 (75%), Positives = 81/95 (85%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K N ++ SYP+DAVFMPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KTPNKAQNGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EE+ + LE+NQ++VTLPFF FH
Sbjct: 220 RNLIDLFIPFLHAEEQDIILEDNQNRVTLPFFTFH 254
[33][TOP]
>UniRef100_C3UP04 RNA polymerase alpha subunit n=1 Tax=Megaleranthis saniculifolia
RepID=C3UP04_9MAGN
Length = 328
Score = 151 bits (382), Expect = 2e-35
Identities = 72/95 (75%), Positives = 81/95 (85%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NN ++RSYP+DAVFMPV NANHSIHSYGNGNEKQEILFLEIWT+GSLTPKEAL+ AS
Sbjct: 160 KTPNNAQERSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTDGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EE+ LE+NQ +VTLPFF FH
Sbjct: 220 RNLIDLFIPFLHAEEQDTKLEDNQSRVTLPFFTFH 254
[34][TOP]
>UniRef100_UPI0001596B8A RNA polymerase alpha subunit n=1 Tax=Medicago truncatula
RepID=UPI0001596B8A
Length = 333
Score = 151 bits (381), Expect = 2e-35
Identities = 73/95 (76%), Positives = 78/95 (82%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NN +D SY +DAVFMPV NANHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 KTLNNIQDGSYTIDAVFMPVRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EEE L ENNQH+VTLP F FH
Sbjct: 220 RNLIDLFIPFLHAEEENLNFENNQHKVTLPLFTFH 254
[35][TOP]
>UniRef100_B5LMQ5 RNA polymerase alpha subunit n=1 Tax=Cicer arietinum
RepID=B5LMQ5_CICAR
Length = 333
Score = 151 bits (381), Expect = 2e-35
Identities = 73/95 (76%), Positives = 78/95 (82%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NN +D SY +DAVFMPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEAL AS
Sbjct: 160 KTLNNIQDESYTIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALFEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EE+ L LENNQ +VTLP F FH
Sbjct: 220 RNLIDLFIPFLHAEEDKLNLENNQQKVTLPLFTFH 254
[36][TOP]
>UniRef100_Q9MTJ3 DNA-directed RNA polymerase subunit alpha n=3 Tax=Oenothera
RepID=RPOA_OENEH
Length = 366
Score = 151 bits (381), Expect = 2e-35
Identities = 71/95 (74%), Positives = 78/95 (82%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NNF+D SYP+DAVFMPV NANHSIHSYGN NEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KSPNNFQDGSYPIDAVFMPVRNANHSIHSYGNQNEKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ F+PF H EEE L+L N++ VT P F FH
Sbjct: 220 RNLIDLFLPFLHAEEENLHLGKNKYNVTFPLFTFH 254
[37][TOP]
>UniRef100_C6TK62 Putative uncharacterized protein (Fragment) n=1 Tax=Glycine max
RepID=C6TK62_SOYBN
Length = 269
Score = 150 bits (378), Expect = 5e-35
Identities = 71/95 (74%), Positives = 77/95 (81%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NF+D SYP+DA FMPV N NHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 KTLKNFQDGSYPIDATFMPVRNVNHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EE+ LENNQH+VTLP F FH
Sbjct: 220 RNLIDLFIPFLHAEEDNFNLENNQHKVTLPLFTFH 254
[38][TOP]
>UniRef100_A9QAY1 RNA polymerase alpha subunit (Fragment) n=1 Tax=Anethum graveolens
RepID=A9QAY1_9APIA
Length = 338
Score = 150 bits (378), Expect = 5e-35
Identities = 72/95 (75%), Positives = 80/95 (84%), Gaps = 2/95 (2%)
Frame = -2
Query: 281 SNNFEDRSYPMDAVFMPVENANHSIHSYGNGN--EKQEILFLEIWTNGSLTPKEALHRAS 108
+NNF+D SYP+DAVFMP+ NANHSIHSYGNGN +KQEILFLEIWTNGSLTPKEALH AS
Sbjct: 163 NNNFQDGSYPIDAVFMPIRNANHSIHSYGNGNGNDKQEILFLEIWTNGSLTPKEALHEAS 222
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EEE L+L +NQH V LP F FH
Sbjct: 223 RNLIDLFIPFLHTEEENLHLADNQHMVPLPPFTFH 257
[39][TOP]
>UniRef100_Q2PMQ3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Glycine max
RepID=RPOA_SOYBN
Length = 333
Score = 150 bits (378), Expect = 5e-35
Identities = 71/95 (74%), Positives = 77/95 (81%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NF+D SYP+DA FMPV N NHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 KTLKNFQDGSYPIDATFMPVRNVNHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EE+ LENNQH+VTLP F FH
Sbjct: 220 RNLIDLFIPFLHAEEDNFNLENNQHKVTLPLFTFH 254
[40][TOP]
>UniRef100_A0ZZ67 DNA-directed RNA polymerase subunit alpha n=1 Tax=Gossypium
barbadense RepID=RPOA_GOSBA
Length = 330
Score = 150 bits (378), Expect = 5e-35
Identities = 74/96 (77%), Positives = 78/96 (81%), Gaps = 1/96 (1%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NF D SYP+DAVFMPV NANHSIH YGN NEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 162 KTPKNFHDGSYPIDAVFMPVRNANHSIHCYGNDNEKQEILFLEIWTNGSLTPKEALHEAS 221
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLP-FFPFH 3
NLI+ FI F H +EE L+LENNQH VTL FFPFH
Sbjct: 222 RNLIDLFIHFLHAKEENLHLENNQHDVTLHFFFPFH 257
[41][TOP]
>UniRef100_B1NWI2 RNA polymerase alpha subunit n=1 Tax=Manihot esculenta
RepID=B1NWI2_MANES
Length = 343
Score = 149 bits (377), Expect = 7e-35
Identities = 75/99 (75%), Positives = 82/99 (82%), Gaps = 4/99 (4%)
Frame = -2
Query: 287 KMSNNFE--DRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHR 114
K +NNF+ D SY +DAVFMPV NANHS+HSYGNGNEKQEILFLEIWTNGSLTPKEALH
Sbjct: 160 KPTNNFQVQDGSYSIDAVFMPVRNANHSVHSYGNGNEKQEILFLEIWTNGSLTPKEALHE 219
Query: 113 ASGNLIN*FIPFQHVEEETLYL--ENNQHQVTLPFFPFH 3
AS NLI+ FIPF H EEE L+L E NQH+VTLP F FH
Sbjct: 220 ASRNLIDFFIPFLHAEEENLHLEIEKNQHKVTLPLFCFH 258
[42][TOP]
>UniRef100_A7KVR0 RNA polymerase alpha subunit (Fragment) n=1 Tax=Olea europaea
RepID=A7KVR0_OLEEU
Length = 280
Score = 149 bits (377), Expect = 7e-35
Identities = 73/95 (76%), Positives = 78/95 (82%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
KM +NF+D SYP+DAVFMPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALH A
Sbjct: 134 KMPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEAC 193
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EEE L LE+NQH V L FH
Sbjct: 194 RNLIDLFIPFLHKEEENLPLEDNQHTVPLSPLTFH 228
[43][TOP]
>UniRef100_A7Y3I1 DNA-directed RNA polymerase subunit alpha n=1 Tax=Ipomoea purpurea
RepID=RPOA_IPOPU
Length = 337
Score = 149 bits (377), Expect = 7e-35
Identities = 71/95 (74%), Positives = 79/95 (83%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K +NFED SYP+DAVFMPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KTHHNFEDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H+EEE L+LE+ +H + L FH
Sbjct: 220 RNLIDLFIPFLHMEEENLHLEDGEHTIPLSPLSFH 254
[44][TOP]
>UniRef100_A0A367 DNA-directed RNA polymerase subunit alpha n=1 Tax=Coffea arabica
RepID=RPOA_COFAR
Length = 335
Score = 149 bits (376), Expect = 9e-35
Identities = 71/95 (74%), Positives = 80/95 (84%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NF+D SYP+DAVFMP+ NAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALH+AS
Sbjct: 160 KTPQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHQAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H+EE+ +LENNQH V L F FH
Sbjct: 220 RNLIDLFIPFLHMEEQNSHLENNQHTVPLAPFFFH 254
[45][TOP]
>UniRef100_P13911 DNA-directed RNA polymerase subunit alpha n=1 Tax=Pisum sativum
RepID=RPOA_PEA
Length = 334
Score = 149 bits (375), Expect = 1e-34
Identities = 71/95 (74%), Positives = 78/95 (82%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NN +D SY +DAVFMPV NANHSIHSY NGN+KQEILFLEIWTNGSLTPKEAL+ AS
Sbjct: 159 KTLNNIQDGSYTIDAVFMPVRNANHSIHSYVNGNQKQEILFLEIWTNGSLTPKEALYEAS 218
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EEE L ENNQH++TLP F FH
Sbjct: 219 RNLIDLFIPFLHAEEENLNFENNQHKMTLPLFTFH 253
[46][TOP]
>UniRef100_Q4VZK3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cucumis sativus
RepID=RPOA_CUCSA
Length = 333
Score = 148 bits (373), Expect = 2e-34
Identities = 71/94 (75%), Positives = 78/94 (82%), Gaps = 2/94 (2%)
Frame = -2
Query: 278 NNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNL 99
NNF+D SYPMDA+FMPV N NHSIHSY NGNEKQEILFLEIWTNGSLTPKEALH AS NL
Sbjct: 163 NNFQDASYPMDAIFMPVRNVNHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALHEASRNL 222
Query: 98 IN*FIPFQHVEE--ETLYLENNQHQVTLPFFPFH 3
I+ FIPF H EE E +L+NN+ +VTLP F FH
Sbjct: 223 IDLFIPFLHAEEEKENFHLKNNKKKVTLPLFTFH 256
[47][TOP]
>UniRef100_B2XWQ5 RNA polymerase alpha subunit n=1 Tax=Fagopyrum esculentum subsp.
ancestrale RepID=B2XWQ5_FAGEA
Length = 337
Score = 146 bits (369), Expect = 6e-34
Identities = 69/95 (72%), Positives = 78/95 (82%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NNF+D SYP+D VFMPV N NHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 KTPNNFQDGSYPIDVVFMPVRNVNHSIHSYSNGNEKQEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF + E+E +LE+NQ +VTLP F FH
Sbjct: 220 RNLIDLFIPFLYAEKENFHLEDNQDRVTLPLFLFH 254
[48][TOP]
>UniRef100_Q09ME5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Citrus sinensis
RepID=RPOA_CITSI
Length = 328
Score = 146 bits (369), Expect = 6e-34
Identities = 72/96 (75%), Positives = 80/96 (83%), Gaps = 1/96 (1%)
Frame = -2
Query: 287 KMSNNFEDRS-YPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRA 111
K N F+D + YP+DAVFMPV NANHSI SYGNGNEKQEILFLEIWTNGSLTPKEALH A
Sbjct: 160 KTPNTFQDGNCYPIDAVFMPVRNANHSIQSYGNGNEKQEILFLEIWTNGSLTPKEALHEA 219
Query: 110 SGNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
S +LI+ FIPF E+E L LENNQ++VTLPFF FH
Sbjct: 220 SRSLIDLFIPFLQAEDENLPLENNQYKVTLPFFTFH 255
[49][TOP]
>UniRef100_A9L9C8 RNA polymerase alpha subunit n=1 Tax=Lemna minor RepID=A9L9C8_LEMMI
Length = 284
Score = 146 bits (368), Expect = 8e-34
Identities = 69/93 (74%), Positives = 78/93 (83%)
Frame = -2
Query: 281 SNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGN 102
+NN +D SYP+DAVFMPV NANHSI+SYGNGNEKQEILFLEIWTNGSLTPKEALH AS N
Sbjct: 162 TNNSQDGSYPIDAVFMPVRNANHSIYSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRN 221
Query: 101 LIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
LI+ FIPF H EE+ + LE N+ + TLP F FH
Sbjct: 222 LIDLFIPFLHAEEKDINLEENKSRFTLPLFTFH 254
[50][TOP]
>UniRef100_Q09WY5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Morus indica
RepID=RPOA_MORIN
Length = 323
Score = 146 bits (368), Expect = 8e-34
Identities = 72/95 (75%), Positives = 78/95 (82%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NNF++ SYP+DAVFMPV NANHSIHSY NGNE QEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KTPNNFQNGSYPIDAVFMPVRNANHSIHSYVNGNENQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EE +LENNQH+ TLP F FH
Sbjct: 220 RNLIDLFIPFFHAEE---HLENNQHKGTLPLFNFH 251
[51][TOP]
>UniRef100_A6MM68 DNA-directed RNA polymerase subunit alpha n=1 Tax=Buxus microphylla
RepID=RPOA_BUXMI
Length = 337
Score = 145 bits (367), Expect = 1e-33
Identities = 69/95 (72%), Positives = 76/95 (80%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K N +D YP+DAVFMPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KTPKNSQDGRYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EE L++NQ++V LP F FH
Sbjct: 220 RNLIDLFIPFLHANEENFILKDNQNKVALPLFTFH 254
[52][TOP]
>UniRef100_Q4FGA2 RNA polymerase alpha chain (Fragment) n=1 Tax=Nuphar advena
RepID=Q4FGA2_NUPAD
Length = 336
Score = 145 bits (365), Expect = 2e-33
Identities = 67/92 (72%), Positives = 78/92 (84%)
Frame = -2
Query: 278 NNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNL 99
NN++D SYP+DAV MPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEAL+ AS NL
Sbjct: 163 NNYQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNL 222
Query: 98 IN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
I+ FIPF H EE+ + +E+N + T+PFF FH
Sbjct: 223 IDLFIPFLHAEEQDINIEDNLKRATVPFFTFH 254
[53][TOP]
>UniRef100_Q9BBQ4 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lotus japonicus
RepID=RPOA_LOTJA
Length = 333
Score = 145 bits (365), Expect = 2e-33
Identities = 69/91 (75%), Positives = 76/91 (83%)
Frame = -2
Query: 275 NFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLI 96
NF+D SY +DA+FMPV NANHSIHSY NGNEKQEILFLEIWTNGSLTPKEAL+ AS NLI
Sbjct: 164 NFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLI 223
Query: 95 N*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
+ FIPF H EEE L ENN+H+VTLP F H
Sbjct: 224 DLFIPFLHAEEEKLNFENNEHKVTLPLFTCH 254
[54][TOP]
>UniRef100_Q0G9I7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Liriodendron
tulipifera RepID=RPOA_LIRTU
Length = 337
Score = 145 bits (365), Expect = 2e-33
Identities = 68/95 (71%), Positives = 78/95 (82%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NN++D SYP+DAV MPV NANHSIHSYGN NEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KTPNNYQDGSYPIDAVSMPVRNANHSIHSYGNRNEKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EE+ + LE+N ++ T+P F FH
Sbjct: 220 RNLIDLFIPFLHAEEQDIVLEDNPNRFTVPLFTFH 254
[55][TOP]
>UniRef100_A6MMF4 DNA-directed RNA polymerase subunit alpha n=1 Tax=Chloranthus
spicatus RepID=RPOA_CHLSC
Length = 334
Score = 145 bits (365), Expect = 2e-33
Identities = 68/95 (71%), Positives = 78/95 (82%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K N +++ SYP+DAV MPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KTPNKYQNGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EEE + LE+N ++ +PFF FH
Sbjct: 220 RNLIDLFIPFLHAEEEGIRLEDNPNRFNIPFFTFH 254
[56][TOP]
>UniRef100_A7QC74 Chromosome chr10 scaffold_76, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QC74_VITVI
Length = 310
Score = 144 bits (364), Expect = 2e-33
Identities = 69/86 (80%), Positives = 75/86 (87%)
Frame = -2
Query: 260 SYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIP 81
SYP+DAVFMPV NANHSIHSYGNG+E+QEILFLEIWTNGSLTPKEALH AS NLI+ FIP
Sbjct: 160 SYPIDAVFMPVRNANHSIHSYGNGSERQEILFLEIWTNGSLTPKEALHEASRNLIDLFIP 219
Query: 80 FQHVEEETLYLENNQHQVTLPFFPFH 3
F H EEETL+LE NQH+ TLP FH
Sbjct: 220 FLHAEEETLHLEYNQHKGTLPPLTFH 245
[57][TOP]
>UniRef100_P06505 DNA-directed RNA polymerase subunit alpha n=1 Tax=Spinacia oleracea
RepID=RPOA_SPIOL
Length = 335
Score = 144 bits (363), Expect = 3e-33
Identities = 69/95 (72%), Positives = 79/95 (83%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NNF+D S+P+DA+FMPV N NHSIHSYGNGNEKQEILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 KAPNNFQDGSFPIDALFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ IPF H EE + LE+NQH+V+LP F FH
Sbjct: 220 RNLIDLLIPFLHA-EENVNLEDNQHKVSLPLFTFH 253
[58][TOP]
>UniRef100_A8SED5 DNA-directed RNA polymerase subunit alpha n=2 Tax=Ceratophyllum
demersum RepID=RPOA_CERDE
Length = 337
Score = 144 bits (363), Expect = 3e-33
Identities = 67/95 (70%), Positives = 78/95 (82%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NN++D SYP+D VFMPV NANHSIHSYGNG EKQEILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 KTPNNYQDGSYPIDTVFMPVRNANHSIHSYGNGTEKQEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLIN FIPF H EE+ + LE++++ T+P F FH
Sbjct: 220 RNLINLFIPFLHAEEQEILLEDSENISTVPLFTFH 254
[59][TOP]
>UniRef100_A6MMX6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Illicium
oligandrum RepID=RPOA_ILLOL
Length = 331
Score = 144 bits (362), Expect = 4e-33
Identities = 66/95 (69%), Positives = 78/95 (82%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NN++D SYP+DAV MPV NANHSIHSYGNGNEKQEILFLEIWTNGS TPKEAL+ AS
Sbjct: 160 KTPNNYQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSFTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ F+PF H EE+ + +E+NQ++ T P F FH
Sbjct: 220 RNLIDLFLPFLHAEEQDINVEDNQNRATAPLFTFH 254
[60][TOP]
>UniRef100_A4GGD7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Phaseolus
vulgaris RepID=RPOA_PHAVU
Length = 333
Score = 142 bits (358), Expect = 1e-32
Identities = 68/95 (71%), Positives = 75/95 (78%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NF+D SY +DA FMPV N N+SIHSY NGNEKQEILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 KTLKNFQDGSYDIDARFMPVRNVNYSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI FIPF H EE+ +LE NQH+VTLP F FH
Sbjct: 220 QNLIELFIPFLHAEEDNFHLEKNQHKVTLPLFTFH 254
[61][TOP]
>UniRef100_Q06GM8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Piper cenocladum
RepID=RPOA_PIPCE
Length = 339
Score = 141 bits (355), Expect = 3e-32
Identities = 66/95 (69%), Positives = 77/95 (81%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K +N ED SYP+DA+FMPV NANHS+HSYGNGNEKQEILF+EIWTNGSLTPKEAL+ AS
Sbjct: 160 KTPHNDEDGSYPIDAIFMPVRNANHSVHSYGNGNEKQEILFIEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EE ++LE+N + V L F FH
Sbjct: 220 RNLIDLFIPFLHAEEREIHLEDNANGVPLALFTFH 254
[62][TOP]
>UniRef100_Q4FGA0 RNA polymerase alpha chain (Fragment) n=1 Tax=Typha latifolia
RepID=Q4FGA0_TYPLA
Length = 339
Score = 140 bits (354), Expect = 3e-32
Identities = 67/92 (72%), Positives = 76/92 (82%)
Frame = -2
Query: 281 SNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGN 102
+NN +D SYP+DAV MPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEAL+ AS N
Sbjct: 162 TNNSQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRN 221
Query: 101 LIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
LI+ FIPF H EEE + E N+++ TLPF F
Sbjct: 222 LIDLFIPFLHAEEEDINFEENKNRFTLPFLTF 253
[63][TOP]
>UniRef100_A1XGS0 DNA-directed RNA polymerase subunit alpha n=2 Tax=Ranunculus
macranthus RepID=RPOA_RANMC
Length = 346
Score = 140 bits (354), Expect = 3e-32
Identities = 70/96 (72%), Positives = 78/96 (81%), Gaps = 1/96 (1%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NN + SYP+DAVFMPV NANHSIHSYGNGNE QEILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 KTPNNAQKGSYPIDAVFMPVRNANHSIHSYGNGNENQEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQ-HQVTLPFFPFH 3
NLI+ FIPF H EE+ L++NQ + VTLPFF FH
Sbjct: 220 RNLIDLFIPFLHAEEQDQNLKDNQKNGVTLPFFTFH 255
[64][TOP]
>UniRef100_Q06RA0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Jasminum
nudiflorum RepID=RPOA_JASNU
Length = 355
Score = 140 bits (353), Expect = 4e-32
Identities = 69/95 (72%), Positives = 75/95 (78%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
KM +N +D SYP+DAVFMPV NANHSIHSYG+GNEK EILFLEIWTNGSLTPKEALH A
Sbjct: 160 KMPHNSQDGSYPIDAVFMPVRNANHSIHSYGSGNEKHEILFLEIWTNGSLTPKEALHEAC 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EEET LE+N H V L FH
Sbjct: 220 RNLIDLFIPFLHKEEETSPLEDNHHTVPLSPLTFH 254
[65][TOP]
>UniRef100_A9QBD4 RNA polymerase alpha subunit (Fragment) n=1 Tax=Elaeis oleifera
RepID=A9QBD4_ELAOL
Length = 339
Score = 140 bits (352), Expect = 6e-32
Identities = 67/94 (71%), Positives = 76/94 (80%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K +NN +D SYP+DAV MPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 KSANNSQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ FIPF H EEE + E N+++ LP F F
Sbjct: 220 RNLIDLFIPFLHAEEEDINFEENKNRFPLPLFTF 253
[66][TOP]
>UniRef100_Q5QA74 DNA-directed RNA polymerase subunit alpha n=1 Tax=Acorus gramineus
RepID=RPOA_ACOGR
Length = 337
Score = 140 bits (352), Expect = 6e-32
Identities = 67/94 (71%), Positives = 76/94 (80%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K + N +D SYP+DAV MPV NANHSIHSYGNGN+KQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KTTKNSQDGSYPIDAVSMPVRNANHSIHSYGNGNQKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ FIPF H EEE + E NQ++ T+P F F
Sbjct: 220 RNLIDLFIPFLHAEEEDINFEENQNRFTVPPFTF 253
[67][TOP]
>UniRef100_Q3V502 DNA-directed RNA polymerase subunit alpha n=2 Tax=Acorus
RepID=RPOA_ACOCL
Length = 337
Score = 140 bits (352), Expect = 6e-32
Identities = 67/94 (71%), Positives = 76/94 (80%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K + N +D SYP+DAV MPV NANHSIHSYGNGN+KQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KTTKNSQDGSYPIDAVSMPVRNANHSIHSYGNGNQKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ FIPF H EEE + E NQ++ T+P F F
Sbjct: 220 RNLIDLFIPFLHAEEEDINFEENQNRFTVPPFTF 253
[68][TOP]
>UniRef100_Q4FG99 RNA polymerase alpha chain (Fragment) n=1 Tax=Yucca schidigera
RepID=Q4FG99_9ASPA
Length = 337
Score = 139 bits (351), Expect = 7e-32
Identities = 66/92 (71%), Positives = 76/92 (82%)
Frame = -2
Query: 281 SNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGN 102
+NN +D SYP+DAV MPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEAL+ AS N
Sbjct: 160 TNNSQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRN 219
Query: 101 LIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
LI+ FIPF H EE ++ E N+++ TLP F F
Sbjct: 220 LIDLFIPFLHAEEGDIHFEENKNRFTLPLFTF 251
[69][TOP]
>UniRef100_Q8MC99 DNA-directed RNA polymerase subunit alpha n=1 Tax=Vigna angularis
RepID=RPOA_PHAAN
Length = 333
Score = 138 bits (348), Expect = 2e-31
Identities = 67/95 (70%), Positives = 74/95 (77%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NF+D SY +DA FMPV N N+SIHSY NGNEKQEILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 KTLKNFQDGSYDIDARFMPVRNVNYSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EEE LE +H+VTLP F FH
Sbjct: 220 QNLIDLFIPFLHAEEENFNLEKKKHKVTLPLFTFH 254
[70][TOP]
>UniRef100_A9QC95 RNA polymerase alpha subunit (Fragment) n=1 Tax=Trachelium
caeruleum RepID=A9QC95_TRACE
Length = 337
Score = 137 bits (346), Expect = 3e-31
Identities = 67/93 (72%), Positives = 75/93 (80%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K + NF+D SYP+DAVFMPV N NHSI+SYG GN+K EILFLEIWTNGSLTPKEALH A+
Sbjct: 160 KTAKNFQDGSYPIDAVFMPVRNVNHSIYSYGTGNDKHEILFLEIWTNGSLTPKEALHEAA 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFP 9
NLI+ FIPF H EEE L LE+NQH LPF P
Sbjct: 220 RNLIDLFIPFLHTEEENLDLEDNQHM--LPFRP 250
[71][TOP]
>UniRef100_Q7YJU6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Calycanthus
floridus var. glaucus RepID=RPOA_CALFG
Length = 340
Score = 137 bits (346), Expect = 3e-31
Identities = 67/97 (69%), Positives = 79/97 (81%), Gaps = 2/97 (2%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NN++D SYP+DAV MPV NANHSIHSYG+GNEKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KAPNNYQDGSYPIDAVSMPVRNANHSIHSYGSGNEKQEILFLEIWTNGSLTPKEALHEAS 219
Query: 107 GNLIN*FIPFQHVEEETLY--LENNQHQVTLPFFPFH 3
NLI+ FIPF H EE+ ++ LE+NQ++ T+ F H
Sbjct: 220 RNLIDLFIPFLHAEEQDIHLNLEDNQNRFTVSPFTLH 256
[72][TOP]
>UniRef100_Q5IBI2 RNA polymerase alpha subunit (Fragment) n=1 Tax=Plantago rugelii
RepID=Q5IBI2_9LAMI
Length = 308
Score = 137 bits (345), Expect = 4e-31
Identities = 70/95 (73%), Positives = 75/95 (78%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K + F+DRSYP+DAVFMPV N NHSIHSYGN EKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 145 KSPHIFQDRSYPIDAVFMPVRNVNHSIHSYGN--EKQEILFLEIWTNGSLTPKEALHEAS 202
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EEE L LENNQ V+ F FH
Sbjct: 203 RNLIDLFIPFLHKEEENLPLENNQDTVSFSPFSFH 237
[73][TOP]
>UniRef100_A6MMN9 DNA-directed RNA polymerase subunit alpha n=1 Tax=Dioscorea
elephantipes RepID=RPOA_DIOEL
Length = 337
Score = 137 bits (345), Expect = 4e-31
Identities = 66/94 (70%), Positives = 75/94 (79%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K N +D SYP+DAVFMPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 KPITNSQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE + E N+++ TLP F
Sbjct: 220 RNLIDLFVPFLHAEEEDINFEENKNKFTLPPLTF 253
[74][TOP]
>UniRef100_A9QBM7 RNA polymerase alpha subunit (Fragment) n=1 Tax=Musa acuminata
RepID=A9QBM7_MUSAC
Length = 339
Score = 136 bits (342), Expect = 8e-31
Identities = 65/94 (69%), Positives = 76/94 (80%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K + N ++ SYP+DAV MPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 KPTTNSQNGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ FIPF H EEE + + N+++ TLP F F
Sbjct: 220 RNLIDLFIPFLHAEEEDINFKENKNRFTLPIFTF 253
[75][TOP]
>UniRef100_Q06GW5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Drimys
granadensis RepID=RPOA_DRIGR
Length = 339
Score = 136 bits (342), Expect = 8e-31
Identities = 69/96 (71%), Positives = 78/96 (81%), Gaps = 2/96 (2%)
Frame = -2
Query: 287 KMSNNFEDRSYPM--DAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHR 114
K NN +D SYP+ +AV MPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALH
Sbjct: 160 KTPNNDQDGSYPIPIEAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHE 219
Query: 113 ASGNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
AS NLI+ FIPF H EEE + LE++ ++ TLPFF F
Sbjct: 220 ASHNLIDLFIPFLHGEEEDINLEDSLNRGTLPFFTF 255
[76][TOP]
>UniRef100_Q6EW20 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nymphaea alba
RepID=RPOA_NYMAL
Length = 341
Score = 135 bits (341), Expect = 1e-30
Identities = 65/96 (67%), Positives = 78/96 (81%), Gaps = 2/96 (2%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
+ NN++D SYP+DAV MPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 RTQNNYQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETL--YLENNQHQVTLPFFPF 6
NLI+ FIPF H EE+ + +E+N + ++PFF F
Sbjct: 220 RNLIDLFIPFLHAEEQDINRNMEDNLKRASVPFFAF 255
[77][TOP]
>UniRef100_A8W3F3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cuscuta exaltata
RepID=RPOA_CUSEX
Length = 335
Score = 135 bits (340), Expect = 1e-30
Identities = 69/92 (75%), Positives = 76/92 (82%), Gaps = 1/92 (1%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NFED SYP+DAVFMPV NANHSIHSYGN EKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KTHPNFEDGSYPIDAVFMPVRNANHSIHSYGN--EKQEILFLEIWTNGSLTPKEALHEAS 217
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTL-PF 15
NLI+ FIPF H+EEE L+LE+ H ++L PF
Sbjct: 218 RNLIDLFIPFLHMEEENLHLEDADHTISLSPF 249
[78][TOP]
>UniRef100_B0FIU6 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta japonica
RepID=B0FIU6_CUSJA
Length = 332
Score = 134 bits (337), Expect = 3e-30
Identities = 69/94 (73%), Positives = 76/94 (80%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NFED SYP+DAVFMPV+NANHSIHSYGN EKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KTHANFEDGSYPIDAVFMPVQNANHSIHSYGN--EKQEILFLEIWTNGSLTPKEALHEAS 217
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ FIPF H+E+E L LE+ H T+P PF
Sbjct: 218 RNLIDLFIPFLHMEKENLPLEDADH--TIPLSPF 249
[79][TOP]
>UniRef100_Q49CA2 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cuscuta japonica
RepID=RPOA_CUSJA
Length = 332
Score = 134 bits (337), Expect = 3e-30
Identities = 69/94 (73%), Positives = 76/94 (80%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NFED SYP+DAVFMPV+NANHSIHSYGN EKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KTHANFEDGSYPIDAVFMPVQNANHSIHSYGN--EKQEILFLEIWTNGSLTPKEALHEAS 217
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ FIPF H+E+E L LE+ H T+P PF
Sbjct: 218 RNLIDLFIPFLHMEKENLPLEDADH--TIPLSPF 249
[80][TOP]
>UniRef100_Q4QZ04 DNA-directed RNA polymerase alpha chain n=1 Tax=Chrysanthemum x
morifolium RepID=Q4QZ04_CHRMO
Length = 335
Score = 134 bits (336), Expect = 4e-30
Identities = 66/95 (69%), Positives = 74/95 (77%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K N F+D SYP+D VFMPV NANHSIHSY NGN+ EILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KAPNTFQDGSYPIDPVFMPVRNANHSIHSYENGNK--EILFLEIWTNGSLTPKEALHEAS 217
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ IPF H +EE L LE+NQH + LP F F+
Sbjct: 218 RNLIDLLIPFLHTKEENLNLEDNQHMIPLPPFTFY 252
[81][TOP]
>UniRef100_B0FIU7 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta
lupuliformis RepID=B0FIU7_9ASTE
Length = 335
Score = 134 bits (336), Expect = 4e-30
Identities = 68/94 (72%), Positives = 76/94 (80%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NFED SYP+DAVFMPV+NANHSIHSYGN EKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KTHANFEDGSYPIDAVFMPVQNANHSIHSYGN--EKQEILFLEIWTNGSLTPKEALHEAS 217
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ FIPF H+E+E L+LE+ T+P PF
Sbjct: 218 RNLIDLFIPFLHIEKENLHLEDADR--TIPLSPF 249
[82][TOP]
>UniRef100_B8R4C0 RNA polymerase alpha subunit n=1 Tax=Trifolium subterraneum
RepID=B8R4C0_TRISU
Length = 337
Score = 133 bits (335), Expect = 5e-30
Identities = 66/97 (68%), Positives = 76/97 (78%), Gaps = 2/97 (2%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDA--VFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHR 114
K +N +D SY +D VFMPV +AN+SIHSY N NEKQEILFLEIWTNGSLTPKEAL+
Sbjct: 160 KTIDNIQDGSYTIDVDPVFMPVIHANYSIHSYLNANEKQEILFLEIWTNGSLTPKEALYE 219
Query: 113 ASGNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
A+ NLI+ FIPF H EEE + ENNQH+VTLP F FH
Sbjct: 220 AARNLIDLFIPFLHAEEENFHFENNQHKVTLPLFAFH 256
[83][TOP]
>UniRef100_B2LMM5 RNA polymerase alpha subunit n=1 Tax=Guizotia abyssinica
RepID=B2LMM5_GUIAB
Length = 335
Score = 133 bits (334), Expect = 7e-30
Identities = 67/95 (70%), Positives = 74/95 (77%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K N F+D SYP+D VFMPV NANHSIHSY NGN+ EILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KAPNTFQDGSYPIDPVFMPVRNANHSIHSYENGNK--EILFLEIWTNGSLTPKEALHEAS 217
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ IPF H +EE L LE+NQH V LP F F+
Sbjct: 218 RNLIDLLIPFLHTKEENLNLEDNQHIVPLPPFTFY 252
[84][TOP]
>UniRef100_Q1KXS7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Helianthus annuus
RepID=RPOA_HELAN
Length = 335
Score = 133 bits (334), Expect = 7e-30
Identities = 67/95 (70%), Positives = 74/95 (77%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K N F+D SYP+D VFMPV NANHSIHSY NGN+ EILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KAPNTFQDGSYPIDPVFMPVRNANHSIHSYENGNK--EILFLEIWTNGSLTPKEALHEAS 217
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ IPF H +EE L LE+NQH V LP F F+
Sbjct: 218 RNLIDLLIPFLHTKEENLSLEDNQHIVPLPPFTFY 252
[85][TOP]
>UniRef100_Q8SKY1 DNA-directed RNA polymerase subunit alpha n=2 Tax=Cuscuta reflexa
RepID=RPOA_CUSRE
Length = 335
Score = 133 bits (334), Expect = 7e-30
Identities = 68/94 (72%), Positives = 76/94 (80%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NFED SYP+DA+FMPV NANHSI+SYGN EKQEILFLEIWTNGSLTPKEALH AS
Sbjct: 160 KTHANFEDGSYPIDALFMPVRNANHSINSYGN--EKQEILFLEIWTNGSLTPKEALHEAS 217
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ FIPF H+EEE L+LE+ H T+P PF
Sbjct: 218 RNLIDLFIPFLHMEEENLHLEDADH--TIPLSPF 249
[86][TOP]
>UniRef100_P60314 DNA-directed RNA polymerase subunit alpha n=1 Tax=Amborella
trichopoda RepID=RPOA_AMBTC
Length = 334
Score = 132 bits (332), Expect = 1e-29
Identities = 63/89 (70%), Positives = 73/89 (82%)
Frame = -2
Query: 269 EDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN* 90
+D SYP+DAV MPV NAN+SI YGN NEKQEILFLEIWTNGSLTPKEAL+ AS NLI+
Sbjct: 164 QDASYPIDAVSMPVRNANYSIQCYGNENEKQEILFLEIWTNGSLTPKEALYEASRNLIDL 223
Query: 89 FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
FIPF H EE L+L+++Q+ T PFFPFH
Sbjct: 224 FIPFLHAEERDLHLDDDQNIFTAPFFPFH 252
[87][TOP]
>UniRef100_Q332U5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lactuca sativa
RepID=RPOA_LACSA
Length = 335
Score = 131 bits (330), Expect = 2e-29
Identities = 66/95 (69%), Positives = 73/95 (76%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K N F+D SYP+D VFMPV NANHSIHSY NGN+ EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 KAPNTFQDGSYPIDPVFMPVRNANHSIHSYENGNK--EILFLEIWTNGSLTPKEALYEAS 217
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ IPF H +EE L LE NQH V LP F F+
Sbjct: 218 RNLIDLLIPFLHTKEENLNLEGNQHMVPLPPFTFY 252
[88][TOP]
>UniRef100_Q3BAK5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Phalaenopsis
aphrodite subsp. formosana RepID=RPOA_PHAAO
Length = 337
Score = 129 bits (324), Expect = 1e-28
Identities = 62/94 (65%), Positives = 73/94 (77%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K +N+ D SYP+D V MPV NANHSIHSYGNGNEKQEILF+EIWTNGSLTPKEAL+ AS
Sbjct: 160 KSTNDSHDGSYPIDIVSMPVRNANHSIHSYGNGNEKQEILFIEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ IPF H EEE + + N+++ LP F F
Sbjct: 220 RNLIDLLIPFLHAEEEDMNFKENENRWNLPPFSF 253
[89][TOP]
>UniRef100_Q49C94 RpoA n=1 Tax=Cuscuta europaea RepID=Q49C94_CUSEU
Length = 329
Score = 125 bits (314), Expect = 1e-27
Identities = 62/95 (65%), Positives = 76/95 (80%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K+ +F+D SYP+DA+FMPV+NANHSIHSYGN EKQEILFLEIWTNGSLTPKEALH ++
Sbjct: 160 KVDLHFDDGSYPIDALFMPVQNANHSIHSYGN--EKQEILFLEIWTNGSLTPKEALHESA 217
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
LI+ FIPF +EEE LYL + +H + LP F+
Sbjct: 218 RILIDFFIPFFQMEEENLYLADAKHTIXLPPLIFY 252
[90][TOP]
>UniRef100_B0FIU5 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta europaea
RepID=B0FIU5_CUSEU
Length = 329
Score = 125 bits (314), Expect = 1e-27
Identities = 62/95 (65%), Positives = 76/95 (80%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K+ +F+D SYP+DA+FMPV+NANHSIHSYGN EKQEILFLEIWTNGSLTPKEALH ++
Sbjct: 160 KVDLHFDDGSYPIDALFMPVQNANHSIHSYGN--EKQEILFLEIWTNGSLTPKEALHESA 217
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
LI+ FIPF +EEE LYL + +H + LP F+
Sbjct: 218 RILIDFFIPFFQMEEENLYLADAKHTIPLPPLIFY 252
[91][TOP]
>UniRef100_B0FIU4 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta epilinum
RepID=B0FIU4_9ASTE
Length = 330
Score = 125 bits (314), Expect = 1e-27
Identities = 62/95 (65%), Positives = 75/95 (78%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K+ +F+D YP+DA+FMPV+NANHSIHSYGN EKQEILFLEIWTNGSLTPKEALH A+
Sbjct: 160 KVDLHFDDGIYPIDALFMPVQNANHSIHSYGN--EKQEILFLEIWTNGSLTPKEALHEAA 217
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
LI+ FIPF H+EEE LYL + +H + L F+
Sbjct: 218 RILIDFFIPFFHMEEENLYLADAEHTIPLSSLIFY 252
[92][TOP]
>UniRef100_P93993 DNA-directed RNA polymerase subunit alpha n=1 Tax=Australopyrum
velutinum RepID=RPOA_AUSVE
Length = 339
Score = 123 bits (309), Expect = 5e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVXMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 253
[93][TOP]
>UniRef100_Q7H6H4 RNA polymerase alpha subunit n=1 Tax=Elymus virginicus
RepID=Q7H6H4_9POAL
Length = 339
Score = 123 bits (308), Expect = 7e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 253
[94][TOP]
>UniRef100_Q539W2 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys lanuginosa
RepID=Q539W2_9POAL
Length = 339
Score = 123 bits (308), Expect = 7e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 253
[95][TOP]
>UniRef100_Q539W0 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys fragilis
subsp. secaliformis RepID=Q539W0_PSAFR
Length = 339
Score = 123 bits (308), Expect = 7e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 253
[96][TOP]
>UniRef100_Q539V6 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys caduca
RepID=Q539V6_9POAL
Length = 339
Score = 123 bits (308), Expect = 7e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 253
[97][TOP]
>UniRef100_Q539V4 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys caduca
RepID=Q539V4_9POAL
Length = 339
Score = 123 bits (308), Expect = 7e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 253
[98][TOP]
>UniRef100_Q3Y512 RNA polymerase subunit a n=1 Tax=Elymus dentatus RepID=Q3Y512_9POAL
Length = 339
Score = 123 bits (308), Expect = 7e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 253
[99][TOP]
>UniRef100_B8Y305 RNA polymerase alpha subunit n=1 Tax=Festuca arundinacea
RepID=B8Y305_FESAR
Length = 346
Score = 123 bits (308), Expect = 7e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 165 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 224
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 225 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 258
[100][TOP]
>UniRef100_P93964 DNA-directed RNA polymerase subunit alpha n=1 Tax=Secale strictum
RepID=RPOA_SECST
Length = 339
Score = 123 bits (308), Expect = 7e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGASFEENKNRFTPPLFTF 253
[101][TOP]
>UniRef100_P93960 DNA-directed RNA polymerase subunit alpha n=1 Tax=Psathyrostachys
rupestris RepID=RPOA_PSARU
Length = 339
Score = 123 bits (308), Expect = 7e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 253
[102][TOP]
>UniRef100_Q7H6F6 DNA-directed RNA polymerase subunit alpha n=9 Tax=Triticeae
RepID=RPOA_PSAJU
Length = 339
Score = 123 bits (308), Expect = 7e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 253
[103][TOP]
>UniRef100_P92418 DNA-directed RNA polymerase subunit alpha n=1 Tax=Psathyrostachys
fragilis RepID=RPOA_PSAFR
Length = 339
Score = 123 bits (308), Expect = 7e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 253
[104][TOP]
>UniRef100_A8Y9B8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lolium perenne
RepID=RPOA_LOLPR
Length = 341
Score = 123 bits (308), Expect = 7e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 253
[105][TOP]
>UniRef100_Q7H6J2 DNA-directed RNA polymerase subunit alpha n=8 Tax=Hordeum
RepID=RPOA_HORBU
Length = 339
Score = 123 bits (308), Expect = 7e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 253
[106][TOP]
>UniRef100_P93956 DNA-directed RNA polymerase subunit alpha n=2 Tax=Triticeae
RepID=RPOA_FESSE
Length = 339
Score = 123 bits (308), Expect = 7e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 253
[107][TOP]
>UniRef100_P93974 DNA-directed RNA polymerase subunit alpha n=2 Tax=Eremopyrum
RepID=RPOA_EREDI
Length = 339
Score = 123 bits (308), Expect = 7e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 253
[108][TOP]
>UniRef100_Q8MAI9 DNA-directed RNA polymerase subunit alpha n=1 Tax=Leymus
californicus RepID=RPOA_ELYCL
Length = 339
Score = 123 bits (308), Expect = 7e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 253
[109][TOP]
>UniRef100_Q7H6I5 DNA-directed RNA polymerase subunit alpha n=22 Tax=Triticeae
RepID=RPOA_ELYCA
Length = 339
Score = 123 bits (308), Expect = 7e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 253
[110][TOP]
>UniRef100_P92225 DNA-directed RNA polymerase subunit alpha n=1 Tax=Crithopsis
delileana RepID=RPOA_CRIDE
Length = 339
Score = 123 bits (308), Expect = 7e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGASFEENKNRFTPPLFTF 253
[111][TOP]
>UniRef100_P92220 DNA-directed RNA polymerase subunit alpha n=1 Tax=Bromus inermis
RepID=RPOA_BROIN
Length = 339
Score = 123 bits (308), Expect = 7e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 253
[112][TOP]
>UniRef100_A1EA40 DNA-directed RNA polymerase subunit alpha n=1 Tax=Agrostis
stolonifera RepID=RPOA_AGRST
Length = 339
Score = 123 bits (308), Expect = 7e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 253
[113][TOP]
>UniRef100_P92209 DNA-directed RNA polymerase subunit alpha n=3 Tax=Agropyron
RepID=RPOA_AGRCR
Length = 339
Score = 123 bits (308), Expect = 7e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 253
[114][TOP]
>UniRef100_Q8MAJ0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Aegilops
uniaristata RepID=RPOA_AEGUN
Length = 339
Score = 123 bits (308), Expect = 7e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGASFEENKNRFTPPLFTF 253
[115][TOP]
>UniRef100_P92429 DNA-directed RNA polymerase subunit alpha n=1 Tax=Aegilops tauschii
RepID=RPOA_AEGTA
Length = 339
Score = 123 bits (308), Expect = 7e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 253
[116][TOP]
>UniRef100_Q7GED9 DNA-directed RNA polymerase subunit alpha n=9 Tax=Triticeae
RepID=RPOA_AEGCM
Length = 339
Score = 123 bits (308), Expect = 7e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGASFEENKNRFTPPLFTF 253
[117][TOP]
>UniRef100_B3TN81 RNA polymerase alpha subunit (Fragment) n=1 Tax=Brachypodium
distachyon RepID=B3TN81_BRADI
Length = 338
Score = 122 bits (307), Expect = 9e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTGFEENKNRFTPPLFTF 253
[118][TOP]
>UniRef100_P09562 DNA-directed RNA polymerase subunit alpha n=1 Tax=Zea mays
RepID=RPOA_MAIZE
Length = 339
Score = 122 bits (307), Expect = 9e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N +D SYP+DAVFMPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNSQDGSYPIDAVFMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N++++T P F
Sbjct: 220 RNLIDLFLPFLHTEEEGTSFEENKNRLTPPLLTF 253
[119][TOP]
>UniRef100_P92389 DNA-directed RNA polymerase subunit alpha n=1 Tax=Heteranthelium
piliferum RepID=RPOA_HETPI
Length = 339
Score = 122 bits (307), Expect = 9e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELIKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 253
[120][TOP]
>UniRef100_P93968 DNA-directed RNA polymerase subunit alpha n=1 Tax=Festucopsis
festucoides RepID=RPOA_FESFE
Length = 339
Score = 122 bits (307), Expect = 9e-27
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNLNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 253
[121][TOP]
>UniRef100_C8XU47 RNA polymerase alpha subunit n=1 Tax=Coix lacryma-jobi
RepID=C8XU47_COILA
Length = 339
Score = 122 bits (306), Expect = 1e-26
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N +D SYP+DAVFMPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNSQDGSYPIDAVFMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N++++T P F
Sbjct: 220 RNLIDLFLPFIHTEEEGTSFEENKNRLTPPLLTF 253
[122][TOP]
>UniRef100_Q6L370 DNA-directed RNA polymerase subunit alpha n=2 Tax=Saccharum
RepID=RPOA_SACHY
Length = 339
Score = 122 bits (306), Expect = 1e-26
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N +D SYP+DAVFMPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNSQDGSYPIDAVFMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N++++T P F
Sbjct: 220 RNLIDLFLPFIHTEEEGTSFEENKNRLTPPLLTF 253
[123][TOP]
>UniRef100_P92439 DNA-directed RNA polymerase subunit alpha n=3 Tax=Thinopyrum
RepID=RPOA_THIBE
Length = 339
Score = 121 bits (304), Expect = 2e-26
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPPFTF 253
[124][TOP]
>UniRef100_Q8MAI6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lophopyrum
elongatum RepID=RPOA_LOPEL
Length = 339
Score = 121 bits (304), Expect = 2e-26
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPPFTF 253
[125][TOP]
>UniRef100_Q8MAI8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Elymus hystrix
RepID=RPOA_ELYHY
Length = 339
Score = 120 bits (302), Expect = 4e-26
Identities = 58/94 (61%), Positives = 70/94 (74%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DA MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAESMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 253
[126][TOP]
>UniRef100_A1E9V6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Sorghum bicolor
RepID=RPOA_SORBI
Length = 339
Score = 120 bits (301), Expect = 5e-26
Identities = 58/94 (61%), Positives = 71/94 (75%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N +D SYP+DAVFMPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNSQDGSYPIDAVFMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E +++++T P F
Sbjct: 220 RNLIDLFLPFIHTEEEGTSFEESKNRLTPPLLTF 253
[127][TOP]
>UniRef100_A6H5L3 DNA-directed RNA polymerase subunit alpha n=2 Tax=Cycas
RepID=RPOA_CYCTA
Length = 340
Score = 120 bits (300), Expect = 6e-26
Identities = 57/90 (63%), Positives = 71/90 (78%)
Frame = -2
Query: 275 NFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLI 96
N++D +P+DAVFMPV NAN+SIHSYGNGN+ QEILFLEIWTNGSL P+EAL+RAS NLI
Sbjct: 164 NYQDGIFPIDAVFMPVRNANYSIHSYGNGNDIQEILFLEIWTNGSLAPREALYRASRNLI 223
Query: 95 N*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
+ FIPF EE+ + +NQ+ +P F F
Sbjct: 224 DLFIPFLRAEEQNIDGMDNQNGSNMPSFSF 253
[128][TOP]
>UniRef100_Q3Y511 RNA polymerase subunit a n=1 Tax=Elymus mutabilis
RepID=Q3Y511_9POAL
Length = 339
Score = 119 bits (299), Expect = 8e-26
Identities = 58/94 (61%), Positives = 70/94 (74%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV MPV N N+SI S GNG EK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGIEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 253
[129][TOP]
>UniRef100_C7SM26 RNA polymerase alpha subunit n=1 Tax=Joinvillea plicata
RepID=C7SM26_9POAL
Length = 339
Score = 119 bits (299), Expect = 8e-26
Identities = 59/90 (65%), Positives = 68/90 (75%)
Frame = -2
Query: 275 NFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLI 96
N +D SYP+DAV MPV N N+SI+S GN NEK EILFLEIWTNGSLTPKEAL+ AS NLI
Sbjct: 164 NSQDGSYPIDAVSMPVRNVNYSIYSCGNENEKYEILFLEIWTNGSLTPKEALYEASRNLI 223
Query: 95 N*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
+ FIPF H EEE E N+++ TLP F
Sbjct: 224 DLFIPFLHAEEEDTNFEENKNRFTLPLLTF 253
[130][TOP]
>UniRef100_B7T309 RNA polymerase alpha subunit n=1 Tax=Erodium texanum
RepID=B7T309_EROTE
Length = 328
Score = 119 bits (299), Expect = 8e-26
Identities = 58/86 (67%), Positives = 68/86 (79%)
Frame = -2
Query: 281 SNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGN 102
+N+ +DR YP+DAVFMPV+N NHSIH+Y NG+ E+LF EIWTNGSLTPKEAL AS
Sbjct: 165 TNSHDDRGYPIDAVFMPVKNVNHSIHAYENGSH--EMLFFEIWTNGSLTPKEALREASRK 222
Query: 101 LIN*FIPFQHVEEETLYLENNQHQVT 24
LIN FIPF H EEE +LENNQ+Q T
Sbjct: 223 LINLFIPFLHAEEENSHLENNQNQHT 248
[131][TOP]
>UniRef100_B2ZE98 RNA polymerase alpha subunit n=1 Tax=Phyllostachys propinqua
RepID=B2ZE98_9POAL
Length = 339
Score = 119 bits (297), Expect = 1e-25
Identities = 58/94 (61%), Positives = 69/94 (73%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N +D SYP+DAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNSQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLLTF 253
[132][TOP]
>UniRef100_P93962 DNA-directed RNA polymerase subunit alpha n=1 Tax=Psathyrostachys
stoloniformis RepID=RPOA_PSAST
Length = 339
Score = 118 bits (296), Expect = 2e-25
Identities = 57/94 (60%), Positives = 69/94 (73%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+ V MPV N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIXXVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTF 253
[133][TOP]
>UniRef100_B7T379 RNA polymerase alpha subunit n=1 Tax=Geranium carolinianum
RepID=B7T379_9ROSI
Length = 329
Score = 118 bits (295), Expect = 2e-25
Identities = 59/88 (67%), Positives = 68/88 (77%), Gaps = 1/88 (1%)
Frame = -2
Query: 284 MSNNF-EDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
M NF +DR YP+DAVF+PV+N NHSIHSY NG+ E+LFLEIWTNGSLTPKEAL AS
Sbjct: 163 MPTNFHDDRGYPIDAVFLPVKNVNHSIHSYENGSH--EMLFLEIWTNGSLTPKEALREAS 220
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVT 24
LIN FIPF H EEE + ENNQ++ T
Sbjct: 221 RKLINLFIPFLHAEEENFHFENNQNEHT 248
[134][TOP]
>UniRef100_B0FIU3 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta nitida
RepID=B0FIU3_9ASTE
Length = 339
Score = 118 bits (295), Expect = 2e-25
Identities = 59/89 (66%), Positives = 72/89 (80%)
Frame = -2
Query: 272 FEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN 93
F++ +Y +DAVFMPV N NHSI+SYGN EK+EILFLEIWTNGSLTPKEALH A+ NL++
Sbjct: 165 FQNETYSLDAVFMPVLNVNHSIYSYGN--EKKEILFLEIWTNGSLTPKEALHEAAQNLMD 222
Query: 92 *FIPFQHVEEETLYLENNQHQVTLPFFPF 6
FIPF +EEE L LE+ +HQ+ PF PF
Sbjct: 223 LFIPFLQMEEENLNLEDAEHQI--PFSPF 249
[135][TOP]
>UniRef100_Q539W1 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys lanuginosa
RepID=Q539W1_9POAL
Length = 339
Score = 117 bits (294), Expect = 3e-25
Identities = 57/94 (60%), Positives = 69/94 (73%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N++D SYP+DAV M V N N+SI S GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNYQDGSYPIDAVSMXVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLLTF 253
[136][TOP]
>UniRef100_C3W0T7 RNA polymerase alpha subunit n=1 Tax=Cedrus deodara
RepID=C3W0T7_CEDDE
Length = 335
Score = 117 bits (294), Expect = 3e-25
Identities = 55/90 (61%), Positives = 71/90 (78%)
Frame = -2
Query: 278 NNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNL 99
NN++D +P+DAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+EAL+ AS NL
Sbjct: 163 NNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNL 222
Query: 98 IN*FIPFQHVEEETLYLENNQHQVTLPFFP 9
I+ FIPF H EE+ + NN+ +P FP
Sbjct: 223 IDLFIPFLHGEEQNIDGMNNRKGSNMPPFP 252
[137][TOP]
>UniRef100_C3W2E4 RNA polymerase alpha subunit n=1 Tax=Pinus peuce RepID=C3W2E4_PINPE
Length = 335
Score = 117 bits (292), Expect = 5e-25
Identities = 56/91 (61%), Positives = 71/91 (78%)
Frame = -2
Query: 281 SNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGN 102
SNN++D +P+DAVFMPV +AN+SIHSYG+GNE QE+LFLEIWTNG LTP+EAL+ AS N
Sbjct: 162 SNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPREALYEASRN 221
Query: 101 LIN*FIPFQHVEEETLYLENNQHQVTLPFFP 9
LI+ FIPF H EE+ + NN+ + FP
Sbjct: 222 LIDLFIPFLHGEEQNIDGMNNKKGSNMLPFP 252
[138][TOP]
>UniRef100_C3W219 RNA polymerase alpha subunit n=1 Tax=Pinus monticola
RepID=C3W219_PINMO
Length = 335
Score = 117 bits (292), Expect = 5e-25
Identities = 56/91 (61%), Positives = 71/91 (78%)
Frame = -2
Query: 281 SNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGN 102
SNN++D +P+DAVFMPV +AN+SIHSYG+GNE QE+LFLEIWTNG LTP+EAL+ AS N
Sbjct: 162 SNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPREALYEASRN 221
Query: 101 LIN*FIPFQHVEEETLYLENNQHQVTLPFFP 9
LI+ FIPF H EE+ + NN+ + FP
Sbjct: 222 LIDLFIPFLHGEEQNIDGMNNKKGSNMLPFP 252
[139][TOP]
>UniRef100_C3VYH6 RNA polymerase alpha subunit n=4 Tax=Strobus RepID=C3VYH6_PINST
Length = 335
Score = 117 bits (292), Expect = 5e-25
Identities = 56/91 (61%), Positives = 71/91 (78%)
Frame = -2
Query: 281 SNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGN 102
SNN++D +P+DAVFMPV +AN+SIHSYG+GNE QE+LFLEIWTNG LTP+EAL+ AS N
Sbjct: 162 SNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPREALYEASRN 221
Query: 101 LIN*FIPFQHVEEETLYLENNQHQVTLPFFP 9
LI+ FIPF H EE+ + NN+ + FP
Sbjct: 222 LIDLFIPFLHGEEQNIDGMNNKKGSNMLPFP 252
[140][TOP]
>UniRef100_C3VYB7 RNA polymerase alpha subunit n=1 Tax=Pinus squamata
RepID=C3VYB7_9CONI
Length = 335
Score = 117 bits (292), Expect = 5e-25
Identities = 56/91 (61%), Positives = 71/91 (78%)
Frame = -2
Query: 281 SNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGN 102
SNN++D +P+DAVFMPV +AN+SIHSYG+GNE QE+LFLEIWTNG LTP+EAL+ AS N
Sbjct: 162 SNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPREALYEASRN 221
Query: 101 LIN*FIPFQHVEEETLYLENNQHQVTLPFFP 9
LI+ FIPF H EE+ + NN+ + FP
Sbjct: 222 LIDLFIPFLHGEEQNIDGMNNKKGSNMLPFP 252
[141][TOP]
>UniRef100_C3TSB3 RNA polymerase alpha subunit n=1 Tax=Pinus krempfii
RepID=C3TSB3_PINKR
Length = 335
Score = 117 bits (292), Expect = 5e-25
Identities = 56/91 (61%), Positives = 71/91 (78%)
Frame = -2
Query: 281 SNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGN 102
SNN++D +P+DAVFMPV +AN+SIHSYG+GNE QE+LFLEIWTNG LTP+EAL+ AS N
Sbjct: 162 SNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPREALYEASRN 221
Query: 101 LIN*FIPFQHVEEETLYLENNQHQVTLPFFP 9
LI+ FIPF H EE+ + NN+ + FP
Sbjct: 222 LIDLFIPFLHGEEQNIDGMNNKKGSNMLPFP 252
[142][TOP]
>UniRef100_Q85X01 DNA-directed RNA polymerase subunit alpha n=5 Tax=Strobus
RepID=RPOA_PINKO
Length = 335
Score = 117 bits (292), Expect = 5e-25
Identities = 56/91 (61%), Positives = 71/91 (78%)
Frame = -2
Query: 281 SNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGN 102
SNN++D +P+DAVFMPV +AN+SIHSYG+GNE QE+LFLEIWTNG LTP+EAL+ AS N
Sbjct: 162 SNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPREALYEASRN 221
Query: 101 LIN*FIPFQHVEEETLYLENNQHQVTLPFFP 9
LI+ FIPF H EE+ + NN+ + FP
Sbjct: 222 LIDLFIPFLHGEEQNIDGMNNKKGSNMLPFP 252
[143][TOP]
>UniRef100_Q2LIP2 RNA polymerase subunit (Fragment) n=1 Tax=Oryza rhizomatis
RepID=Q2LIP2_9ORYZ
Length = 317
Score = 116 bits (291), Expect = 7e-25
Identities = 57/94 (60%), Positives = 68/94 (72%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N +D SYP+DAV MPV N N+SI S GNGN K EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 140 EVRKNTQDGSYPIDAVSMPVRNVNYSIFSCGNGNAKYEILFLEIWTNGSLTPKEALYEAS 199
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE + NQ++ T P F
Sbjct: 200 RNLIDLFLPFLHTEEEGTRFQENQNRFTSPLLSF 233
[144][TOP]
>UniRef100_C6GJ86 RpoA n=2 Tax=Bambuseae RepID=C6GJ86_BAMOL
Length = 339
Score = 116 bits (291), Expect = 7e-25
Identities = 57/94 (60%), Positives = 68/94 (72%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N +D SYP+DAV MPV N N+SI GNGNEK EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 ELRKNSQDGSYPIDAVSMPVRNVNYSIFYCGNGNEKHEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE E N+++ T P F
Sbjct: 220 RNLIDLFLPFLHAEEEGTSFEENKNRFTPPLLTF 253
[145][TOP]
>UniRef100_C3W1N1 RNA polymerase alpha subunit n=1 Tax=Larix occidentalis
RepID=C3W1N1_LAROX
Length = 335
Score = 115 bits (288), Expect = 1e-24
Identities = 54/90 (60%), Positives = 70/90 (77%)
Frame = -2
Query: 278 NNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNL 99
NN++D +P+DAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+EAL+ AS NL
Sbjct: 163 NNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNL 222
Query: 98 IN*FIPFQHVEEETLYLENNQHQVTLPFFP 9
I+ IPF H EE+ + NN+ +P FP
Sbjct: 223 IDLLIPFLHGEEQNIDGMNNRKGSNMPPFP 252
[146][TOP]
>UniRef100_C1IXV8 RNA polymerase alpha subunit n=1 Tax=Pinus gerardiana
RepID=C1IXV8_PINGE
Length = 335
Score = 115 bits (288), Expect = 1e-24
Identities = 55/91 (60%), Positives = 70/91 (76%)
Frame = -2
Query: 281 SNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGN 102
SNN++D +P+DAVFMPV + N+SIHSYG+GNE QE+LFLEIWTNG LTP+EAL+ AS N
Sbjct: 162 SNNYQDGIFPIDAVFMPVRDVNYSIHSYGSGNEIQEVLFLEIWTNGGLTPREALYEASRN 221
Query: 101 LIN*FIPFQHVEEETLYLENNQHQVTLPFFP 9
LI+ FIPF H EE+ + NN+ + FP
Sbjct: 222 LIDLFIPFLHGEEQNIDGMNNKKGSNMLPFP 252
[147][TOP]
>UniRef100_Q2LIP1 RNA polymerase subunit (Fragment) n=1 Tax=Oryza punctata
RepID=Q2LIP1_ORYPU
Length = 317
Score = 115 bits (287), Expect = 2e-24
Identities = 56/94 (59%), Positives = 68/94 (72%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N +D SYP+DAV MPV N N+SI S GNGN K EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 140 EVRKNTQDGSYPIDAVSMPVRNVNYSIFSCGNGNAKYEILFLEIWTNGSLTPKEALYEAS 199
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE + N+++ T P F
Sbjct: 200 RNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLSF 233
[148][TOP]
>UniRef100_Q2LIP0 RNA polymerase subunit (Fragment) n=2 Tax=Oryza RepID=Q2LIP0_9ORYZ
Length = 317
Score = 115 bits (287), Expect = 2e-24
Identities = 56/94 (59%), Positives = 68/94 (72%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N +D SYP+DAV MPV N N+SI S GNGN K EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 140 EVRKNTQDGSYPIDAVSMPVRNVNYSIFSCGNGNAKYEILFLEIWTNGSLTPKEALYEAS 199
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE + N+++ T P F
Sbjct: 200 RNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLSF 233
[149][TOP]
>UniRef100_Q2LIN9 RNA polymerase subunit (Fragment) n=1 Tax=Oryza granulata
RepID=Q2LIN9_9ORYZ
Length = 317
Score = 115 bits (287), Expect = 2e-24
Identities = 56/94 (59%), Positives = 68/94 (72%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N +D SYP+DAV MPV N N+SI S GNGN K EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 140 EVRKNAQDGSYPIDAVSMPVRNVNYSIFSCGNGNAKYEILFLEIWTNGSLTPKEALYEAS 199
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE + N+++ T P F
Sbjct: 200 RNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLSF 233
[150][TOP]
>UniRef100_B7T2T8 RNA polymerase alpha subunit n=1 Tax=Erodium chrysanthum
RepID=B7T2T8_9ROSI
Length = 329
Score = 115 bits (287), Expect = 2e-24
Identities = 55/84 (65%), Positives = 66/84 (78%)
Frame = -2
Query: 281 SNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGN 102
+N+ ++R YP+DAVFMPV+N NHSIHSY NG+ E+LF EIWTNGSLTPKEAL AS
Sbjct: 165 NNSHDERGYPIDAVFMPVKNVNHSIHSYENGSH--EMLFFEIWTNGSLTPKEALREASRK 222
Query: 101 LIN*FIPFQHVEEETLYLENNQHQ 30
LIN FIPF H EEE + ENNQ++
Sbjct: 223 LINLFIPFLHAEEEKPHFENNQNE 246
[151][TOP]
>UniRef100_C3VZR7 RNA polymerase alpha subunit n=1 Tax=Pinus aristata
RepID=C3VZR7_9CONI
Length = 335
Score = 114 bits (286), Expect = 3e-24
Identities = 55/91 (60%), Positives = 70/91 (76%)
Frame = -2
Query: 281 SNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGN 102
SNN++D +P+DAVFMPV +AN+SIHSYG+GNE QE+LFLEIWTNG LTP+EAL+ AS N
Sbjct: 162 SNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPREALYEASRN 221
Query: 101 LIN*FIPFQHVEEETLYLENNQHQVTLPFFP 9
LI+ FIPF H EE+ + N + + FP
Sbjct: 222 LIDLFIPFLHGEEQNIDGMNKKKGSNMLPFP 252
[152][TOP]
>UniRef100_C3VZJ9 RNA polymerase alpha subunit n=1 Tax=Pinus albicaulis
RepID=C3VZJ9_9CONI
Length = 335
Score = 114 bits (286), Expect = 3e-24
Identities = 55/91 (60%), Positives = 70/91 (76%)
Frame = -2
Query: 281 SNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGN 102
SNN++D +P+DAVFMPV +AN+SIHSYG+GNE QE+LFLEIWTNG LTP+EAL+ AS N
Sbjct: 162 SNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPREALYEASRN 221
Query: 101 LIN*FIPFQHVEEETLYLENNQHQVTLPFFP 9
LI+ FIPF H EE+ + N + + FP
Sbjct: 222 LIDLFIPFLHGEEQNIDGMNKKKGSNMLPFP 252
[153][TOP]
>UniRef100_C3VXZ8 RNA polymerase alpha subunit n=1 Tax=Pinus rzedowskii
RepID=C3VXZ8_PINRZ
Length = 335
Score = 114 bits (286), Expect = 3e-24
Identities = 55/91 (60%), Positives = 70/91 (76%)
Frame = -2
Query: 281 SNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGN 102
SNN++D +P+DAVFMPV +AN+SIHSYG+GNE QE+LFLEIWTNG LTP+EAL+ AS N
Sbjct: 162 SNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPREALYEASRN 221
Query: 101 LIN*FIPFQHVEEETLYLENNQHQVTLPFFP 9
LI+ FIPF H EE+ + N + + FP
Sbjct: 222 LIDLFIPFLHGEEQNIDGMNKKKGSNMLPFP 252
[154][TOP]
>UniRef100_B7T3F0 RNA polymerase alpha subunit n=1 Tax=Geranium macrorrhizum
RepID=B7T3F0_9ROSI
Length = 329
Score = 114 bits (286), Expect = 3e-24
Identities = 57/87 (65%), Positives = 66/87 (75%)
Frame = -2
Query: 284 MSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASG 105
+SN +DR YP+DAVFMPV+N NHSIHSY NG +LFLEIWTNGSLTPKEAL AS
Sbjct: 164 LSNLHDDRGYPIDAVFMPVKNVNHSIHSYENGIHA--MLFLEIWTNGSLTPKEALRGASR 221
Query: 104 NLIN*FIPFQHVEEETLYLENNQHQVT 24
LIN FIPF H EE+ + ENNQ++ T
Sbjct: 222 KLINLFIPFLHAEEQNCHFENNQNEHT 248
[155][TOP]
>UniRef100_B7ZIR8 RNA polymerase alpha chain n=1 Tax=Keteleeria davidiana
RepID=B7ZIR8_KETDA
Length = 336
Score = 114 bits (285), Expect = 3e-24
Identities = 54/91 (59%), Positives = 71/91 (78%), Gaps = 1/91 (1%)
Frame = -2
Query: 278 NNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNL 99
NN++D +P+DAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+EAL+ AS NL
Sbjct: 163 NNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNL 222
Query: 98 IN*FIPFQHVEEETL-YLENNQHQVTLPFFP 9
I+ FIPF H EE+ + + N + +P FP
Sbjct: 223 IDFFIPFLHGEEQNIDGINNRKGSSNMPPFP 253
[156][TOP]
>UniRef100_UPI0000DD8D71 Os01g0789400 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000DD8D71
Length = 425
Score = 114 bits (284), Expect = 4e-24
Identities = 55/94 (58%), Positives = 68/94 (72%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N +D SYP+DAV MPV N N+SI + GNGN K EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 248 EVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPKEALYEAS 307
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE + N+++ T P F
Sbjct: 308 RNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLSF 341
[157][TOP]
>UniRef100_Q8S1Q6 Chloroplast RNA polymerase alpha chain n=1 Tax=Oryza sativa
Japonica Group RepID=Q8S1Q6_ORYSJ
Length = 337
Score = 114 bits (284), Expect = 4e-24
Identities = 55/94 (58%), Positives = 68/94 (72%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N +D SYP+DAV MPV N N+SI + GNGN K EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 EVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE + N+++ T P F
Sbjct: 220 RNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLSF 253
[158][TOP]
>UniRef100_Q7DNA8 OSJNBa0061C08.8 protein n=2 Tax=Oryza sativa RepID=Q7DNA8_ORYSJ
Length = 446
Score = 114 bits (284), Expect = 4e-24
Identities = 55/94 (58%), Positives = 68/94 (72%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N +D SYP+DAV MPV N N+SI + GNGN K EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 269 EVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPKEALYEAS 328
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE + N+++ T P F
Sbjct: 329 RNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLSF 362
[159][TOP]
>UniRef100_Q2LIP7 RNA polymerase subunit (Fragment) n=1 Tax=Oryza sativa
RepID=Q2LIP7_ORYSA
Length = 317
Score = 114 bits (284), Expect = 4e-24
Identities = 55/94 (58%), Positives = 68/94 (72%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N +D SYP+DAV MPV N N+SI + GNGN K EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 140 EVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPKEALYEAS 199
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE + N+++ T P F
Sbjct: 200 RNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLSF 233
[160][TOP]
>UniRef100_C3W2L0 RNA polymerase alpha subunit n=1 Tax=Pinus pinaster
RepID=C3W2L0_PINPS
Length = 335
Score = 114 bits (284), Expect = 4e-24
Identities = 54/90 (60%), Positives = 70/90 (77%)
Frame = -2
Query: 278 NNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNL 99
NN++D +P+DAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+EAL+ AS NL
Sbjct: 163 NNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNL 222
Query: 98 IN*FIPFQHVEEETLYLENNQHQVTLPFFP 9
I+ FIPF H EE+ + NN+ + FP
Sbjct: 223 IDLFIPFLHGEEQNIDGMNNKKGSNMLPFP 252
[161][TOP]
>UniRef100_C3W1V8 RNA polymerase alpha subunit n=1 Tax=Pinus merkusii
RepID=C3W1V8_9CONI
Length = 335
Score = 114 bits (284), Expect = 4e-24
Identities = 54/90 (60%), Positives = 70/90 (77%)
Frame = -2
Query: 278 NNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNL 99
NN++D +P+DAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+EAL+ AS NL
Sbjct: 163 NNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNL 222
Query: 98 IN*FIPFQHVEEETLYLENNQHQVTLPFFP 9
I+ FIPF H EE+ + NN+ + FP
Sbjct: 223 IDLFIPFLHGEEQNIDGMNNKKGSNMLPFP 252
[162][TOP]
>UniRef100_C3W150 RNA polymerase alpha subunit n=1 Tax=Pinus leiophylla var.
chihuahuana RepID=C3W150_PINLE
Length = 335
Score = 114 bits (284), Expect = 4e-24
Identities = 54/90 (60%), Positives = 70/90 (77%)
Frame = -2
Query: 278 NNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNL 99
NN++D +P+DAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+EAL+ AS NL
Sbjct: 163 NNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNL 222
Query: 98 IN*FIPFQHVEEETLYLENNQHQVTLPFFP 9
I+ FIPF H EE+ + NN+ + FP
Sbjct: 223 IDLFIPFLHGEEQNIDGMNNKKGSNMLPFP 252
[163][TOP]
>UniRef100_C3W0G5 RNA polymerase alpha subunit n=1 Tax=Pinus banksiana
RepID=C3W0G5_PINBN
Length = 335
Score = 114 bits (284), Expect = 4e-24
Identities = 54/90 (60%), Positives = 70/90 (77%)
Frame = -2
Query: 278 NNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNL 99
NN++D +P+DAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+EAL+ AS NL
Sbjct: 163 NNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNL 222
Query: 98 IN*FIPFQHVEEETLYLENNQHQVTLPFFP 9
I+ FIPF H EE+ + NN+ + FP
Sbjct: 223 IDLFIPFLHGEEQNIDGMNNKKGSNMLPFP 252
[164][TOP]
>UniRef100_C3VZ24 RNA polymerase alpha subunit n=2 Tax=Pinus torreyana
RepID=C3VZ24_PINTO
Length = 335
Score = 114 bits (284), Expect = 4e-24
Identities = 54/90 (60%), Positives = 70/90 (77%)
Frame = -2
Query: 278 NNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNL 99
NN++D +P+DAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+EAL+ AS NL
Sbjct: 163 NNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNL 222
Query: 98 IN*FIPFQHVEEETLYLENNQHQVTLPFFP 9
I+ FIPF H EE+ + NN+ + FP
Sbjct: 223 IDLFIPFLHGEEQNIDGMNNKKGSNMLPFP 252
[165][TOP]
>UniRef100_C3VYP0 RNA polymerase alpha subunit n=1 Tax=Pinus taeda RepID=C3VYP0_PINTA
Length = 335
Score = 114 bits (284), Expect = 4e-24
Identities = 54/90 (60%), Positives = 70/90 (77%)
Frame = -2
Query: 278 NNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNL 99
NN++D +P+DAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+EAL+ AS NL
Sbjct: 163 NNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNL 222
Query: 98 IN*FIPFQHVEEETLYLENNQHQVTLPFFP 9
I+ FIPF H EE+ + NN+ + FP
Sbjct: 223 IDLFIPFLHGEEQNIDGMNNKKGSNMLPFP 252
[166][TOP]
>UniRef100_C3VXT2 RNA polymerase alpha subunit n=1 Tax=Pinus resinosa
RepID=C3VXT2_PINRE
Length = 335
Score = 114 bits (284), Expect = 4e-24
Identities = 54/90 (60%), Positives = 70/90 (77%)
Frame = -2
Query: 278 NNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNL 99
NN++D +P+DAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+EAL+ AS NL
Sbjct: 163 NNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNL 222
Query: 98 IN*FIPFQHVEEETLYLENNQHQVTLPFFP 9
I+ FIPF H EE+ + NN+ + FP
Sbjct: 223 IDLFIPFLHGEEQNIDGMNNKKGSNMLPFP 252
[167][TOP]
>UniRef100_C3VXH3 RNA polymerase alpha subunit n=2 Tax=Pinus RepID=C3VXH3_PINPO
Length = 335
Score = 114 bits (284), Expect = 4e-24
Identities = 54/90 (60%), Positives = 70/90 (77%)
Frame = -2
Query: 278 NNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNL 99
NN++D +P+DAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+EAL+ AS NL
Sbjct: 163 NNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNL 222
Query: 98 IN*FIPFQHVEEETLYLENNQHQVTLPFFP 9
I+ FIPF H EE+ + NN+ + FP
Sbjct: 223 IDLFIPFLHGEEQNIDGMNNKKGSNMLPFP 252
[168][TOP]
>UniRef100_C1IXP0 RNA polymerase alpha subunit n=1 Tax=Pinus contorta
RepID=C1IXP0_PINCO
Length = 335
Score = 114 bits (284), Expect = 4e-24
Identities = 54/90 (60%), Positives = 70/90 (77%)
Frame = -2
Query: 278 NNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNL 99
NN++D +P+DAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+EAL+ AS NL
Sbjct: 163 NNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNL 222
Query: 98 IN*FIPFQHVEEETLYLENNQHQVTLPFFP 9
I+ FIPF H EE+ + NN+ + FP
Sbjct: 223 IDLFIPFLHGEEQNIDGMNNKKGSNMLPFP 252
[169][TOP]
>UniRef100_P41629 DNA-directed RNA polymerase subunit alpha n=2 Tax=Pinus thunbergii
RepID=RPOA_PINTH
Length = 335
Score = 114 bits (284), Expect = 4e-24
Identities = 54/90 (60%), Positives = 70/90 (77%)
Frame = -2
Query: 278 NNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNL 99
NN++D +P+DAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+EAL+ AS NL
Sbjct: 163 NNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNL 222
Query: 98 IN*FIPFQHVEEETLYLENNQHQVTLPFFP 9
I+ FIPF H EE+ + NN+ + FP
Sbjct: 223 IDLFIPFLHGEEQNIDGMNNKKGSNMLPFP 252
[170][TOP]
>UniRef100_P0C500 DNA-directed RNA polymerase subunit alpha n=7 Tax=Oryza
RepID=RPOA_ORYSJ
Length = 337
Score = 114 bits (284), Expect = 4e-24
Identities = 55/94 (58%), Positives = 68/94 (72%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N +D SYP+DAV MPV N N+SI + GNGN K EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 160 EVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPKEALYEAS 219
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE + N+++ T P F
Sbjct: 220 RNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLSF 253
[171][TOP]
>UniRef100_Q7G6A7 DNA-directed RNA polymerase alpha chain, putative, expressed n=2
Tax=Oryza sativa RepID=Q7G6A7_ORYSJ
Length = 446
Score = 112 bits (281), Expect = 1e-23
Identities = 54/94 (57%), Positives = 68/94 (72%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N +D SYP+DAV MPV N N+SI + GNGN + EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 269 EVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNARYEILFLEIWTNGSLTPKEALYEAS 328
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE + N+++ T P F
Sbjct: 329 RNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLSF 362
[172][TOP]
>UniRef100_C1IXH8 RNA polymerase alpha subunit n=1 Tax=Picea sitchensis
RepID=C1IXH8_PICSI
Length = 336
Score = 112 bits (281), Expect = 1e-23
Identities = 54/90 (60%), Positives = 68/90 (75%)
Frame = -2
Query: 278 NNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNL 99
NN++D +P+DAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+EAL AS L
Sbjct: 163 NNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALSEASRIL 222
Query: 98 IN*FIPFQHVEEETLYLENNQHQVTLPFFP 9
I FIPF H EE+ + NN+ +P FP
Sbjct: 223 IELFIPFLHGEEQNIDGMNNRKGSNMPPFP 252
[173][TOP]
>UniRef100_A9QC21 RNA polymerase alpha subunit (Fragment) n=1 Tax=Scaevola aemula
RepID=A9QC21_9ASTR
Length = 332
Score = 112 bits (281), Expect = 1e-23
Identities = 60/95 (63%), Positives = 68/95 (71%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K N F+D SY + AV MPV + N+SIHS GNG KQEILFLEIWTNGSLTPKEALH A
Sbjct: 160 KERNTFQDGSYAIGAVLMPVRHMNYSIHSSGNG--KQEILFLEIWTNGSLTPKEALHEAC 217
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPFH 3
NLI+ FIPF H EE LENNQ ++ P F F+
Sbjct: 218 RNLIDLFIPFLHKEEGN--LENNQDRIPFPSFTFY 250
[174][TOP]
>UniRef100_C3W0M8 RNA polymerase alpha subunit n=1 Tax=Pinus canariensis
RepID=C3W0M8_9CONI
Length = 335
Score = 112 bits (280), Expect = 1e-23
Identities = 53/90 (58%), Positives = 69/90 (76%)
Frame = -2
Query: 278 NNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNL 99
NN++D +P+DAVFMPV + N+SIHSYG+GNE +E+LFLEIWTNG LTP+EAL+ AS NL
Sbjct: 163 NNYQDGIFPIDAVFMPVRDVNYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNL 222
Query: 98 IN*FIPFQHVEEETLYLENNQHQVTLPFFP 9
I+ FIPF H EE+ + NN+ + FP
Sbjct: 223 IDLFIPFLHGEEQNIDGMNNKKGSNMLPFP 252
[175][TOP]
>UniRef100_C3VZD6 RNA polymerase alpha subunit n=1 Tax=Abies firma RepID=C3VZD6_ABIFI
Length = 336
Score = 112 bits (279), Expect = 2e-23
Identities = 53/91 (58%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Frame = -2
Query: 278 NNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNL 99
NN++D +P+DAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+EAL+ AS NL
Sbjct: 163 NNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPREALYEASRNL 222
Query: 98 IN*FIPFQHVEEETL-YLENNQHQVTLPFFP 9
I+ IPF H EE+ + + N + +P FP
Sbjct: 223 IDLLIPFLHGEEQNIDGMNNRKGSSNMPPFP 253
[176][TOP]
>UniRef100_Q2LIP5 RNA polymerase subunit (Fragment) n=1 Tax=Oryza glumipatula
RepID=Q2LIP5_9ORYZ
Length = 317
Score = 111 bits (278), Expect = 2e-23
Identities = 54/94 (57%), Positives = 67/94 (71%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N +D SYP+DAV MPV N N+SI + GNGN K EILFLEIWTNGSLTP EAL+ AS
Sbjct: 140 EVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPMEALYEAS 199
Query: 107 GNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
NLI+ F+PF H EEE + N+++ T P F
Sbjct: 200 RNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLSF 233
[177][TOP]
>UniRef100_B7T3M1 RNA polymerase alpha subunit n=1 Tax=Geranium palmatum
RepID=B7T3M1_9ROSI
Length = 329
Score = 111 bits (277), Expect = 3e-23
Identities = 54/87 (62%), Positives = 65/87 (74%)
Frame = -2
Query: 284 MSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASG 105
++N +DR YP+D+VFMPV+N NHSIHSY NG +LFLEIWTNGSLTPKEAL AS
Sbjct: 164 LTNLHDDRGYPIDSVFMPVKNVNHSIHSYENGIHA--MLFLEIWTNGSLTPKEALREASR 221
Query: 104 NLIN*FIPFQHVEEETLYLENNQHQVT 24
L N FIPF H EE+ + ENNQ++ T
Sbjct: 222 KLSNLFIPFLHAEEQNFHFENNQNEHT 248
[178][TOP]
>UniRef100_B7T3U2 RNA polymerase alpha subunit n=1 Tax=Monsonia speciosa
RepID=B7T3U2_9ROSI
Length = 331
Score = 108 bits (271), Expect = 1e-22
Identities = 56/82 (68%), Positives = 62/82 (75%), Gaps = 1/82 (1%)
Frame = -2
Query: 266 DRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*F 87
D +YP+DAVFMPV N NHSIHSY G+ E+LFLEIWTNGSLTPKEAL AS LIN
Sbjct: 171 DSAYPIDAVFMPVRNVNHSIHSYERGSH--EMLFLEIWTNGSLTPKEALREASRKLINLL 228
Query: 86 IPFQHVEEETLYL-ENNQHQVT 24
+PF H EEE YL ENNQ+Q T
Sbjct: 229 MPFLHAEEENFYLVENNQNQDT 250
[179][TOP]
>UniRef100_Q60F88 DNA-directed RNA polymerase subunit alpha n=1 Tax=Takakia
lepidozioides RepID=RPOA_TAKLE
Length = 341
Score = 108 bits (271), Expect = 1e-22
Identities = 51/86 (59%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
Frame = -2
Query: 266 DRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*F 87
D ++P+DAVFMP+ N N+S+HS+ NGNE QEILFLEIWTNGS+TPKEAL+ AS +LIN F
Sbjct: 167 DGNFPVDAVFMPIRNVNYSVHSFENGNETQEILFLEIWTNGSVTPKEALYEASRSLINLF 226
Query: 86 IPFQHVE-EETLYLENNQHQVTLPFF 12
IPF H E +E +Y N ++ + +F
Sbjct: 227 IPFLHAEKKEFIYGLKNTYESNMSYF 252
[180][TOP]
>UniRef100_Q4FGA3 RNA polymerase alpha chain (Fragment) n=1 Tax=Ginkgo biloba
RepID=Q4FGA3_GINBI
Length = 337
Score = 107 bits (268), Expect = 3e-22
Identities = 54/91 (59%), Positives = 63/91 (69%)
Frame = -2
Query: 278 NNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNL 99
NN D + DAV MPV NAN+SIHSYGNGNE QEILF EIWTNGSL P EAL+ AS NL
Sbjct: 163 NNSRDGIFSTDAVSMPVRNANYSIHSYGNGNEMQEILFSEIWTNGSLAPGEALYEASRNL 222
Query: 98 IN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
I+ FIPF EE+ + +N + + FPF
Sbjct: 223 IDLFIPFMRAEEQNIDGIDNWNGYNMSLFPF 253
[181][TOP]
>UniRef100_B7T413 RNA polymerase alpha subunit n=1 Tax=Monsonia vanderietiae
RepID=B7T413_9ROSI
Length = 333
Score = 106 bits (265), Expect = 7e-22
Identities = 56/78 (71%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Frame = -2
Query: 254 PMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
P+DAVFMPV N NHSI+SY G+ +EILFLEIWTNGSLTPKEAL AS LIN FIPF
Sbjct: 177 PIDAVFMPVRNVNHSIYSYKRGS--REILFLEIWTNGSLTPKEALREASRKLINLFIPFL 234
Query: 74 HVEEETLY-LENNQHQVT 24
H EEE Y LENNQ+Q T
Sbjct: 235 HAEEENFYLLENNQNQHT 252
[182][TOP]
>UniRef100_UPI0000E123FA Os05g0292500 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000E123FA
Length = 351
Score = 106 bits (264), Expect = 9e-22
Identities = 51/76 (67%), Positives = 60/76 (78%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
++ N +D SYP+DAV MPV N N+SI + GNGN K EILFLEIWTNGSLTPKEAL+ AS
Sbjct: 269 EVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPKEALYEAS 328
Query: 107 GNLIN*FIPFQHVEEE 60
NLI+ F+PF H EEE
Sbjct: 329 RNLIDLFLPFLHTEEE 344
[183][TOP]
>UniRef100_Q5EFY8 RNA polymerase alpha subunit n=1 Tax=Oedipodium griffithianum
RepID=Q5EFY8_9BRYO
Length = 340
Score = 100 bits (248), Expect = 6e-20
Identities = 46/87 (52%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
Frame = -2
Query: 266 DRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*F 87
D +P+DA+FMP+ NAN+S+HS+ + N+ QEILF+EIWTNGS+TPKEAL+ AS +LI+ F
Sbjct: 167 DGHFPIDAIFMPIRNANYSVHSFEHENKTQEILFIEIWTNGSITPKEALYEASRSLIDLF 226
Query: 86 IPFQHVEEETLY--LENNQHQVTLPFF 12
IPF H E++ + LEN + +F
Sbjct: 227 IPFLHAEKKEIINGLENKYESNNMSYF 253
[184][TOP]
>UniRef100_Q5EG69 RNA polymerase alpha subunit n=1 Tax=Sphagnum fimbriatum
RepID=Q5EG69_9BRYO
Length = 338
Score = 98.6 bits (244), Expect = 2e-19
Identities = 45/77 (58%), Positives = 60/77 (77%)
Frame = -2
Query: 266 DRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*F 87
D + +DAVF P+ NAN+S+HS+ N NE QEILF+EIWTNGS+TPKEAL+ AS +LI+ F
Sbjct: 170 DGYFSVDAVFTPIRNANYSVHSFENKNETQEILFIEIWTNGSVTPKEALYEASRSLIDLF 229
Query: 86 IPFQHVEEETLYLENNQ 36
IPF H E+E + + N+
Sbjct: 230 IPFLHAEKEEVMHDKNE 246
[185][TOP]
>UniRef100_Q60F85 DNA-dependent RNA polymerase alpha subunit n=1 Tax=Sphagnum
girgensohnii RepID=Q60F85_9BRYO
Length = 341
Score = 97.8 bits (242), Expect = 3e-19
Identities = 49/86 (56%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Frame = -2
Query: 266 DRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*F 87
D + +DAVF P+ NAN+S+HS+ N NE QEILF+EIWTNGS+TPKEAL+ AS +LI+ F
Sbjct: 170 DGYFSVDAVFTPIRNANYSVHSFENKNETQEILFIEIWTNGSVTPKEALYEASRSLIDLF 229
Query: 86 IPFQHVEEETLY--LENNQHQVTLPF 15
IPF H E+E + L N TL F
Sbjct: 230 IPFLHAEKEEVMHGLGNKNESNTLHF 255
[186][TOP]
>UniRef100_Q5EFY2 RNA polymerase alpha subunit n=1 Tax=Polytrichum pallidisetum
RepID=Q5EFY2_9BRYO
Length = 338
Score = 97.8 bits (242), Expect = 3e-19
Identities = 43/69 (62%), Positives = 58/69 (84%)
Frame = -2
Query: 266 DRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*F 87
D +P+DA+FMP+ NAN+S+HS+ N N+ QEILF+EIWTNGS+TPKEAL+ AS +LI+ F
Sbjct: 167 DGYFPIDAIFMPIRNANYSVHSFENNNKIQEILFIEIWTNGSITPKEALYEASRSLIDLF 226
Query: 86 IPFQHVEEE 60
IPF H E++
Sbjct: 227 IPFLHPEKK 235
[187][TOP]
>UniRef100_A7Q481 Chromosome chr9 scaffold_49, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7Q481_VITVI
Length = 150
Score = 97.1 bits (240), Expect = 5e-19
Identities = 43/61 (70%), Positives = 51/61 (83%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRAS 108
K NNF+D SYP+D VFM V+NANH+IH YGN NE+QEILFL++WTN +LTPKEA H AS
Sbjct: 89 KRPNNFQDGSYPIDTVFMSVQNANHNIHFYGNVNERQEILFLKLWTNKNLTPKEAFHEAS 148
Query: 107 G 105
G
Sbjct: 149 G 149
[188][TOP]
>UniRef100_A2T365 DNA-directed RNA polymerase subunit alpha n=1 Tax=Angiopteris
evecta RepID=RPOA_ANGEV
Length = 341
Score = 97.1 bits (240), Expect = 5e-19
Identities = 43/72 (59%), Positives = 58/72 (80%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQH 72
+DAVFMP+ AN+S+HS+GN + QEILF+EIWT+GSLTPKEAL+ AS NLI+ F+PF H
Sbjct: 172 IDAVFMPIRKANYSVHSFGNNKKFQEILFIEIWTDGSLTPKEALYEASRNLIDLFLPFLH 231
Query: 71 VEEETLYLENNQ 36
EEE + + ++
Sbjct: 232 TEEEEIISDRDE 243
[189][TOP]
>UniRef100_Q5EFY4 RNA polymerase alpha subunit n=1 Tax=Dendroligotrichum dendroides
RepID=Q5EFY4_9BRYO
Length = 340
Score = 95.5 bits (236), Expect = 2e-18
Identities = 42/69 (60%), Positives = 57/69 (82%)
Frame = -2
Query: 266 DRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*F 87
D + +DA+FMP+ NAN+S+HS+ N N+ QEILF+EIWTNGS+TPKEAL+ AS +LI+ F
Sbjct: 167 DGYFSIDAIFMPIRNANYSVHSFENNNKIQEILFIEIWTNGSITPKEALYEASRSLIDLF 226
Query: 86 IPFQHVEEE 60
IPF H E++
Sbjct: 227 IPFLHTEKK 235
[190][TOP]
>UniRef100_Q5EFZ1 RNA polymerase alpha subunit n=1 Tax=Buxbaumia aphylla
RepID=Q5EFZ1_9BRYO
Length = 340
Score = 95.1 bits (235), Expect = 2e-18
Identities = 45/92 (48%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
Frame = -2
Query: 281 SNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGN 102
SN + + +DA+FMP+ NAN+S+HS+ N N+ QE+LF+EIWTNGS+TPK+AL+ AS +
Sbjct: 162 SNKSTNSHFFIDAIFMPIRNANYSVHSFENENKTQEMLFIEIWTNGSITPKDALYEASRS 221
Query: 101 LIN*FIPFQHVEEETLY--LENNQHQVTLPFF 12
LI+ FIPF H E + LEN + +F
Sbjct: 222 LIDLFIPFLHAERREIINELENEYKLSNISYF 253
[191][TOP]
>UniRef100_Q85A01 DNA-directed RNA polymerase subunit alpha n=1 Tax=Anthoceros
formosae RepID=RPOA_ANTFO
Length = 340
Score = 94.7 bits (234), Expect = 3e-18
Identities = 46/79 (58%), Positives = 58/79 (73%), Gaps = 2/79 (2%)
Frame = -2
Query: 272 FEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN 93
+ED ++ ++A F P+ NAN+S+HS+ N EKQEILF+E+WTNGSLTPKEAL AS +LIN
Sbjct: 165 YEDGNFAVNAAFTPIRNANYSVHSFENEKEKQEILFIEVWTNGSLTPKEALREASQSLIN 224
Query: 92 *FIPFQH--VEEETLYLEN 42
FIP H E E LEN
Sbjct: 225 LFIPLLHEKKERENRKLEN 243
[192][TOP]
>UniRef100_B1VKC7 RNA polymerase alpha subunit n=1 Tax=Cryptomeria japonica
RepID=B1VKC7_CRYJA
Length = 342
Score = 94.0 bits (232), Expect = 5e-18
Identities = 46/83 (55%), Positives = 57/83 (68%)
Frame = -2
Query: 257 YPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPF 78
+P+DA F PV+N N+SIHSY + NE QEILFLEIWTNG L PKEAL+ AS NLI+ F+PF
Sbjct: 180 FPIDAAFAPVQNVNYSIHSYWSENETQEILFLEIWTNGGLAPKEALYEASRNLIDFFLPF 239
Query: 77 QHVEEETLYLENNQHQVTLPFFP 9
+ +EE N+ P P
Sbjct: 240 LNAKEENSDGTNSLSDDITPSLP 262
[193][TOP]
>UniRef100_Q9BBN0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Marsilea
quadrifolia RepID=RPOA_MARQU
Length = 341
Score = 92.4 bits (228), Expect = 1e-17
Identities = 43/90 (47%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Frame = -2
Query: 278 NNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNL 99
N + D +P+DAVFMPV N N+S+H +G+G E +EILF+E+WTNGSLTP EA+ +AS +
Sbjct: 163 NEYRDGEFPVDAVFMPVRNVNYSVHPFGSGKEMREILFIEVWTNGSLTPTEAISKASKSS 222
Query: 98 IN*FIPFQHVEEETL-YLENNQHQVTLPFF 12
I+ PF H + E + E+N+ +L F
Sbjct: 223 IDLLSPFLHTKHEDIPDFESNRDSSSLMKF 252
[194][TOP]
>UniRef100_P06270 DNA-directed RNA polymerase subunit alpha n=1 Tax=Marchantia
polymorpha RepID=RPOA_MARPO
Length = 340
Score = 90.9 bits (224), Expect = 4e-17
Identities = 44/90 (48%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Frame = -2
Query: 272 FEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN 93
+++ +P+DAVFMP+ NAN+S+HS+ + + +EILFLEIWT+GSLTPKEAL+ AS NLI+
Sbjct: 165 YQEGLFPVDAVFMPIRNANYSVHSFESEKKIKEILFLEIWTDGSLTPKEALYEASRNLID 224
Query: 92 *FIPFQHVE-EETLYLENNQHQVTLPFFPF 6
FIP + E +E + ++ + +FPF
Sbjct: 225 LFIPLINSEKKEKNFGIEKTNESNMSYFPF 254
[195][TOP]
>UniRef100_C5HY86 RNA polymerase a-subunit n=1 Tax=Alsophila spinulosa
RepID=C5HY86_9FILI
Length = 338
Score = 90.1 bits (222), Expect = 7e-17
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Frame = -2
Query: 278 NNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNL 99
N + D +P+DAV MPV N N+S+H +G+G E +EI F+EIWTNGS TP EAL AS NL
Sbjct: 163 NGYRDGEFPVDAVPMPVRNVNYSVHPFGSGREMREISFIEIWTNGSPTPNEALCEASKNL 222
Query: 98 IN*FIPFQHVEEETL-YLENNQ 36
I+ IPF H++ E + + E+ Q
Sbjct: 223 IDLLIPFLHMKHEDVPHFEDEQ 244
[196][TOP]
>UniRef100_B0YPQ7 RNA polymerase alpha subunit n=1 Tax=Aneura mirabilis
RepID=B0YPQ7_ANEMR
Length = 342
Score = 88.2 bits (217), Expect = 3e-16
Identities = 39/67 (58%), Positives = 54/67 (80%)
Frame = -2
Query: 281 SNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGN 102
S + + +P+DAVFMP+ NAN+S+HS+G+ + +EIL LEIWTNGSLTP++AL+ AS N
Sbjct: 163 SRKYREGFFPIDAVFMPIRNANYSVHSFGSREKTKEILLLEIWTNGSLTPEKALYEASRN 222
Query: 101 LIN*FIP 81
LI+ FIP
Sbjct: 223 LIDLFIP 229
[197][TOP]
>UniRef100_Q2KKK3 RNA polymerase alpha subunit (Fragment) n=1 Tax=Polytrichadelphus
purpureus RepID=Q2KKK3_9BRYO
Length = 165
Score = 86.7 bits (213), Expect = 7e-16
Identities = 38/60 (63%), Positives = 50/60 (83%)
Frame = -2
Query: 239 FMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQHVEEE 60
FMP+ NAN+S+HS+ N N+ QEILF+EIWTNGS+TPKEAL+ AS +L + FIPF H E++
Sbjct: 1 FMPIRNANYSVHSFENNNKIQEILFIEIWTNGSITPKEALYEASRSLXDLFIPFLHTEKK 60
[198][TOP]
>UniRef100_Q85FJ1 DNA-directed RNA polymerase subunit alpha n=1 Tax=Adiantum
capillus-veneris RepID=RPOA_ADICA
Length = 345
Score = 83.6 bits (205), Expect = 6e-15
Identities = 43/84 (51%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = -2
Query: 257 YPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPF 78
+P+DAVFMPV N N+SIH +G+G QEILF+EIWTNGSLTP EAL +AS L++ F
Sbjct: 171 FPIDAVFMPVRNVNYSIHLFGSGRATQEILFIEIWTNGSLTPHEALRKASEKLMDLLTTF 230
Query: 77 QHVEEETLYL-ENNQHQVTLPFFP 9
+V + L EN + + L P
Sbjct: 231 LYVRGGDVSLFENGEDSLDLTKSP 254
[199][TOP]
>UniRef100_Q8WHZ1 DNA-directed RNA polymerase subunit alpha n=1 Tax=Psilotum nudum
RepID=RPOA_PSINU
Length = 340
Score = 82.8 bits (203), Expect = 1e-14
Identities = 40/81 (49%), Positives = 58/81 (71%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQH 72
+DA+F P+ NAN+SIHS+ + N+ +EILFLE+WTNGSLTP AL AS +LI+ FI F +
Sbjct: 172 IDALFTPIRNANYSIHSFESNNKVREILFLEVWTNGSLTPGAALSEASRDLIDLFIIFLN 231
Query: 71 VEEETLYLENNQHQVTLPFFP 9
+E+E E +++ + FP
Sbjct: 232 MEKEESIKEIENNELNIKNFP 252
[200][TOP]
>UniRef100_P60315 DNA-directed RNA polymerase subunit alpha, chloroplastic n=2
Tax=Physcomitrella patens RepID=RPOA_PHYPA
Length = 450
Score = 82.8 bits (203), Expect = 1e-14
Identities = 40/70 (57%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Frame = -2
Query: 266 DRSYPMDAVFMPVENANHSIHSYGNGNE-KQEILFLEIWTNGSLTPKEALHRASGNLIN* 90
D + +D+VFMPV NAN+S+HSY + + QEILFLEIWTNGS+TP+EALH A+ LI+
Sbjct: 279 DGRFYIDSVFMPVRNANYSVHSYESEPDVTQEILFLEIWTNGSITPEEALHEAARCLIDL 338
Query: 89 FIPFQHVEEE 60
F+PF H +++
Sbjct: 339 FLPFLHPKKK 348
[201][TOP]
>UniRef100_A6BM49 RNA polymerase alpha subunit n=2 Tax=Spermatophyta
RepID=A6BM49_BRANA
Length = 326
Score = 76.3 bits (186), Expect = 1e-12
Identities = 35/74 (47%), Positives = 49/74 (66%)
Frame = -2
Query: 281 SNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGN 102
S ++ +P+DA MPV N N SIHSY + N+ +E+L EIWTNG LTP+EA + A
Sbjct: 165 SRRHKNGLFPIDAPCMPVRNVNFSIHSYKSENDIREMLIFEIWTNGGLTPREAFYEACWK 224
Query: 101 LIN*FIPFQHVEEE 60
LI+ +P H+EE+
Sbjct: 225 LIDLIVPLLHMEED 238
[202][TOP]
>UniRef100_O98462 DNA-directed RNA polymerase subunit alpha n=1 Tax=Spirogyra maxima
RepID=RPOA_SPIMX
Length = 344
Score = 73.2 bits (178), Expect = 8e-12
Identities = 36/74 (48%), Positives = 52/74 (70%)
Frame = -2
Query: 278 NNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNL 99
N+ +D +P+DA+F PV N N SIH+ E+QE L LEIWTNG++TP +AL + S NL
Sbjct: 165 NDVQDGYFPVDALFNPVRNVNFSIHNLA---EQQEALILEIWTNGAITPLDALRQGSENL 221
Query: 98 IN*FIPFQHVEEET 57
I+ F+P +E++T
Sbjct: 222 IHLFLPPFGLEDDT 235
[203][TOP]
>UniRef100_Q1ACG7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Chara vulgaris
RepID=RPOA_CHAVU
Length = 358
Score = 72.8 bits (177), Expect = 1e-11
Identities = 33/70 (47%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = -2
Query: 260 SYPMDAVFMPVENANHSIHSYGN-GNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FI 84
S+ +DA+FMP+ N N+SIH G+ K E+L LEIWTNGS+TPKEA H+AS ++N F+
Sbjct: 166 SFSIDAIFMPIRNVNYSIHPVEKAGDWKSELLILEIWTNGSITPKEAFHQASEKIMNIFL 225
Query: 83 PFQHVEEETL 54
+ + +
Sbjct: 226 SLSNSSDNQI 235
[204][TOP]
>UniRef100_B7ZII6 RNA polymerase alpha chain n=1 Tax=Ephedra equisetina
RepID=B7ZII6_EPHEU
Length = 258
Score = 71.2 bits (173), Expect = 3e-11
Identities = 34/78 (43%), Positives = 52/78 (66%)
Frame = -2
Query: 269 EDRSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN* 90
+D +P+D V +PV+N N SIHSY + + QE+L EIWTNG LTP+E ++ A +L++
Sbjct: 167 KDIFFPIDGVSLPVQNVNFSIHSYKSSDNIQEMLIFEIWTNGGLTPRETIYEACWSLLDL 226
Query: 89 FIPFQHVEEETLYLENNQ 36
IP VE+ ++N+Q
Sbjct: 227 IIPLLCVEQN---IKNSQ 241
[205][TOP]
>UniRef100_C5Z5P0 Putative uncharacterized protein Sb10g023655 (Fragment) n=1
Tax=Sorghum bicolor RepID=C5Z5P0_SORBI
Length = 66
Score = 70.5 bits (171), Expect = 6e-11
Identities = 33/54 (61%), Positives = 40/54 (74%)
Frame = -2
Query: 167 FLEIWTNGSLTPKEALHRASGNLIN*FIPFQHVEEETLYLENNQHQVTLPFFPF 6
FLEIWTNGSLTPKEAL+ S NLI+ F+PF H EEE E N++++T PF F
Sbjct: 7 FLEIWTNGSLTPKEALYETSRNLIDLFLPFIHTEEEGTNFEENKNRLTPPFLTF 60
[206][TOP]
>UniRef100_Q5SD25 DNA-directed RNA polymerase subunit alpha n=1 Tax=Huperzia lucidula
RepID=RPOA_HUPLU
Length = 336
Score = 70.1 bits (170), Expect = 7e-11
Identities = 31/73 (42%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Frame = -2
Query: 272 FEDRSYPMDAVFMPVENANHSIHSYGNGNEK--QEILFLEIWTNGSLTPKEALHRASGNL 99
++D ++ +DAVF P+ + N+SIH + + ++ +E+L EIW+NGS+TP+EA++ AS +
Sbjct: 168 YKDGNFTVDAVFTPIRSVNYSIHCFESHDKSIMKEMLLYEIWSNGSITPEEAIYEASRSS 227
Query: 98 IN*FIPFQHVEEE 60
IN F+PF E+E
Sbjct: 228 INLFLPFLQAEKE 240
[207][TOP]
>UniRef100_Q32RM8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Zygnema
circumcarinatum RepID=RPOA_ZYGCR
Length = 356
Score = 69.7 bits (169), Expect = 9e-11
Identities = 33/62 (53%), Positives = 43/62 (69%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQH 72
+DA PV N N+SIHS G G+ +QE+L LE+WTNGSLTP+E + +AS NL + P
Sbjct: 169 LDAALKPVRNMNYSIHSLGEGDMRQEMLVLEVWTNGSLTPQEVISQASQNLNDLLKPLLK 228
Query: 71 VE 66
VE
Sbjct: 229 VE 230
[208][TOP]
>UniRef100_C7B2H8 RNA polymerase alpha chain n=1 Tax=Selaginella moellendorffii
RepID=C7B2H8_9TRAC
Length = 247
Score = 68.2 bits (165), Expect = 3e-10
Identities = 35/69 (50%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Frame = -2
Query: 272 FEDRSYPMDAVFMPVENANHSIHSYGN--GNEKQEILFLEIWTNGSLTPKEALHRASGNL 99
++ S P DAVFMP+ +AN+SIH G+ G +E+L LE T+GS TP+EA++ AS NL
Sbjct: 166 YQKGSLPPDAVFMPIRHANYSIHRLGSHGGGIMKEMLLLEARTDGSPTPREAIYEASRNL 225
Query: 98 IN*FIPFQH 72
N F PF H
Sbjct: 226 ANLFSPFPH 234
[209][TOP]
>UniRef100_Q8M9V7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Chaetosphaeridium
globosum RepID=RPOA_CHAGL
Length = 334
Score = 67.8 bits (164), Expect = 4e-10
Identities = 32/70 (45%), Positives = 47/70 (67%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQH 72
+D VF+P+ + N+SIHS+ + +E L +E+WTNGS+ PKEA+ AS NL+N F P
Sbjct: 172 VDPVFIPIRSVNYSIHSFEDEKATKEFLIVEVWTNGSIEPKEAIKEASYNLVNLFTPL-- 229
Query: 71 VEEETLYLEN 42
V +E L+N
Sbjct: 230 VSQEYQQLKN 239
[210][TOP]
>UniRef100_A9SHY0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SHY0_PHYPA
Length = 438
Score = 64.7 bits (156), Expect = 3e-09
Identities = 33/70 (47%), Positives = 51/70 (72%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQH 72
+D+VFMPV AN+S+HS+ + +EILFLEI+TNGS++P+EAL A+ +LI+ +P
Sbjct: 273 IDSVFMPVVQANYSVHSFEVEDVTREILFLEIYTNGSISPEEALIEAARSLIDLLLPL-- 330
Query: 71 VEEETLYLEN 42
+E E + + N
Sbjct: 331 LESEVIEVTN 340
[211][TOP]
>UniRef100_A9CP51 DNA-directed RNA polymerase alpha chain n=1 Tax=Physcomitrella
patens RepID=A9CP51_PHYPA
Length = 525
Score = 64.7 bits (156), Expect = 3e-09
Identities = 33/70 (47%), Positives = 51/70 (72%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQH 72
+D+VFMPV AN+S+HS+ + +EILFLEI+TNGS++P+EAL A+ +LI+ +P
Sbjct: 360 IDSVFMPVVQANYSVHSFEVEDVTREILFLEIYTNGSISPEEALIEAARSLIDLLLPL-- 417
Query: 71 VEEETLYLEN 42
+E E + + N
Sbjct: 418 LESEVIEVTN 427
[212][TOP]
>UniRef100_Q3ZJ77 DNA-directed RNA polymerase subunit alpha n=1 Tax=Pseudendoclonium
akinetum RepID=RPOA_PSEAK
Length = 577
Score = 63.9 bits (154), Expect = 5e-09
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Frame = -2
Query: 257 YPMDAVFMPVENANHSIHSYGNGNEK-QEILFLEIWTNGSLTPKEALHRASGNLIN*FIP 81
+P+DA+FMP+ N+ I S + K ++ + LE+WTNGS+ P+ A+H+A+ LI F+P
Sbjct: 397 FPIDAIFMPINRVNYLIESTEDIKLKIKDRVILEVWTNGSIHPRHAIHKAAKALIQLFLP 456
Query: 80 FQHVEEETLYLENNQH 33
Q + + +N H
Sbjct: 457 LQQIRTNLFLISDNSH 472
[213][TOP]
>UniRef100_Q32RU7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Staurastrum
punctulatum RepID=RPOA_STAPU
Length = 383
Score = 62.8 bits (151), Expect = 1e-08
Identities = 30/55 (54%), Positives = 40/55 (72%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*F 87
+DA F PV+ AN SIHS G+ Q++L LEIWTN +LTP EAL++A +L+N F
Sbjct: 179 IDANFTPVQKANFSIHSVGDPKGLQQLLLLEIWTNKTLTPAEALYQAHASLLNLF 233
[214][TOP]
>UniRef100_B1WQT5 RNA polymerase alpha subunit n=1 Tax=Cyanothece sp. ATCC 51142
RepID=B1WQT5_CYAA5
Length = 314
Score = 62.0 bits (149), Expect = 2e-08
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSY-GNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
+DAVFMPV N+S+ S G E ++ L LEIWTNGS PKEAL RA+ L++ F P +
Sbjct: 166 IDAVFMPVTKVNYSVESIRGEEGEAKDRLMLEIWTNGSFNPKEALSRAADILVDLFNPLK 225
Query: 74 HVEEETLYLENNQHQVTLPFFP 9
+ NQ + +P +P
Sbjct: 226 DL---------NQLETAVPEYP 238
[215][TOP]
>UniRef100_A3IQ28 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cyanothece sp.
CCY0110 RepID=A3IQ28_9CHRO
Length = 314
Score = 62.0 bits (149), Expect = 2e-08
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSY-GNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
+DAVFMPV N+S+ S G E ++ L LEIWTNGS PKEAL RA+ L++ F P +
Sbjct: 166 IDAVFMPVTKVNYSVESIRGEEGEAKDRLMLEIWTNGSFNPKEALSRAADILVDLFNPLK 225
Query: 74 HVEEETLYLENNQHQVTLPFFP 9
+ NQ + +P +P
Sbjct: 226 DL---------NQLETAVPEYP 238
[216][TOP]
>UniRef100_A2CI44 DNA-directed RNA polymerase subunit alpha n=1 Tax=Chlorokybus
atmophyticus RepID=RPOA_CHLAT
Length = 318
Score = 60.5 bits (145), Expect = 6e-08
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Frame = -2
Query: 254 PMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
P+DAVFMPV N+++ G+ QE + +E+WTNGS+ ++A+ + +IN F P Q
Sbjct: 170 PIDAVFMPVTKVNYTVEENYGGDRSQERVIIEVWTNGSINSRQAIDLSVNKIINLFSPLQ 229
Query: 74 HV---EEETLYLENN 39
+V E E L E +
Sbjct: 230 NVRSIEHEPLVKEKD 244
[217][TOP]
>UniRef100_Q6GZZ8 Putative RNA polymerase alpha subunit n=1 Tax=Fremyella diplosiphon
RepID=Q6GZZ8_FREDI
Length = 155
Score = 59.7 bits (143), Expect = 1e-07
Identities = 28/65 (43%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = -2
Query: 251 MDAVFMPVENANHSIH-SYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
+D+VFMPV N+S+ + G+G+ ++ L LE+WTNGS++P+EAL A+G L++ F P +
Sbjct: 6 IDSVFMPVRKVNYSVEEARGDGSITKDRLLLEVWTNGSISPQEALSSAAGILVDLFNPLK 65
Query: 74 HVEEE 60
+ E
Sbjct: 66 DISLE 70
[218][TOP]
>UniRef100_Q4C148 DNA-directed RNA polymerase n=1 Tax=Crocosphaera watsonii WH 8501
RepID=Q4C148_CROWT
Length = 314
Score = 59.7 bits (143), Expect = 1e-07
Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSY-GNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
+DAVFMPV N+S+ S G E ++ L LEIWTNGS PKEAL +A+ L++ F P +
Sbjct: 166 IDAVFMPVTKVNYSVESIRGEEGEAKDRLMLEIWTNGSFNPKEALSKAADILVDLFNPLK 225
Query: 74 HVEE 63
+ +
Sbjct: 226 DLNQ 229
[219][TOP]
>UniRef100_O46914 DNA-directed RNA polymerase subunit alpha n=1 Tax=Guillardia theta
RepID=RPOA_GUITH
Length = 318
Score = 59.7 bits (143), Expect = 1e-07
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Frame = -2
Query: 251 MDAVFMPVENANHSIH-SYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
+D+VFMPV+ N I + G N E L L+IWTNGS++ KEA+ A+ NLIN F P +
Sbjct: 165 VDSVFMPVKKVNFRIEETRGENNILNEQLILDIWTNGSISAKEAISNAADNLINLFSPLK 224
Query: 74 HV--EEETLYLENNQHQV 27
+ E ET Y N +
Sbjct: 225 TIDGESETDYETNETSHI 242
[220][TOP]
>UniRef100_B9IJB3 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IJB3_POPTR
Length = 73
Score = 59.3 bits (142), Expect = 1e-07
Identities = 24/39 (61%), Positives = 31/39 (79%)
Frame = -2
Query: 287 KMSNNFEDRSYPMDAVFMPVENANHSIHSYGNGNEKQEI 171
K NF+D SY +DA+FM V NANH++HSYGNGNEK ++
Sbjct: 30 KPPKNFQDGSYSIDAIFMHVRNANHNVHSYGNGNEKSQL 68
[221][TOP]
>UniRef100_A0YJS0 DNA-directed RNA polymerase alpha subunit n=1 Tax=Lyngbya sp. PCC
8106 RepID=A0YJS0_9CYAN
Length = 314
Score = 58.9 bits (141), Expect = 2e-07
Identities = 28/67 (41%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSYG-NGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
+DAVFMPV N+++ G+ +++ L L+IWTNGSLTP+EAL +A+ L++ F+P +
Sbjct: 166 IDAVFMPVRKVNYTVEDARVGGSLEKDRLILDIWTNGSLTPQEALSQAATILVDLFVPLK 225
Query: 74 HVEEETL 54
+ E++
Sbjct: 226 DITLESI 232
[222][TOP]
>UniRef100_Q2JUJ5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Synechococcus sp.
JA-3-3Ab RepID=RPOA_SYNJA
Length = 331
Score = 58.9 bits (141), Expect = 2e-07
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSYGNGNE-KQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
+D+VFMPV N+++ + G +++ L LEIWTNGSLTP+EAL +A+ L+ F P Q
Sbjct: 184 IDSVFMPVRKVNYTVEAARVGQSLEKDRLILEIWTNGSLTPQEALSQAARILVGLFSPLQ 243
Query: 74 HVEEET 57
V +T
Sbjct: 244 EVSFDT 249
[223][TOP]
>UniRef100_B2ITN1 DNA-directed RNA polymerase, alpha subunit RpoA n=1 Tax=Nostoc
punctiforme PCC 73102 RepID=B2ITN1_NOSP7
Length = 315
Score = 58.5 bits (140), Expect = 2e-07
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = -2
Query: 251 MDAVFMPVENANHSIH-SYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
+D++FMPV N+S+ S G G ++ L LE+WTNGS++P+EAL A+G L++ F P +
Sbjct: 166 IDSIFMPVRKVNYSVEESRGEGLIPKDRLLLEVWTNGSISPQEALSSAAGILVDLFNPLK 225
Query: 74 HVEEE 60
+ E
Sbjct: 226 DISLE 230
[224][TOP]
>UniRef100_B9YIU5 DNA-directed RNA polymerase, alpha subunit n=1 Tax='Nostoc azollae'
0708 RepID=B9YIU5_ANAAZ
Length = 314
Score = 58.2 bits (139), Expect = 3e-07
Identities = 26/64 (40%), Positives = 41/64 (64%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQH 72
+D+VFMPV N+S+ ++ L LE+WTNGS++P+EAL A+G L++ F P +
Sbjct: 166 IDSVFMPVRKVNYSVEEARGDGSLKDRLLLEVWTNGSISPQEALSSAAGILVDLFNPLKD 225
Query: 71 VEEE 60
+ E
Sbjct: 226 ISLE 229
[225][TOP]
>UniRef100_Q9TLV2 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cyanidium
caldarium RepID=RPOA_CYACA
Length = 310
Score = 57.8 bits (138), Expect = 4e-07
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Frame = -2
Query: 254 PMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
P+D++FMPV+ N+ + + E L LE+WTNGSL+P+++++ AS NL+ F P +
Sbjct: 168 PIDSIFMPVKKVNYYVEEILDSKVAYEKLILELWTNGSLSPQQSINYASDNLVKLFNPLR 227
Query: 74 HV----EEETLYLENN 39
+ E ++Y +N+
Sbjct: 228 VLDFSKESSSVYEQNS 243
[226][TOP]
>UniRef100_Q8DML0 DNA-directed RNA polymerase subunit alpha n=1
Tax=Thermosynechococcus elongatus BP-1 RepID=RPOA_THEEB
Length = 321
Score = 57.4 bits (137), Expect = 5e-07
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSYGNGNEK-----QEILFLEIWTNGSLTPKEALHRASGNLIN*F 87
+DAVFMPV N+++ S + + Q+ L LEIWTNGSLTP++AL++A+ L++ F
Sbjct: 169 LDAVFMPVRRVNYTVDSVRSAGAEGDRQLQDYLKLEIWTNGSLTPQDALNQAATILVDLF 228
Query: 86 IPFQHVEEET 57
P + V T
Sbjct: 229 SPLKEVPLHT 238
[227][TOP]
>UniRef100_P48118 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cyanophora
paradoxa RepID=RPOA_CYAPA
Length = 315
Score = 57.4 bits (137), Expect = 5e-07
Identities = 27/66 (40%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = -2
Query: 254 PMDAVFMPVENANHSIHS-YGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPF 78
P+DA+FMPV N+ + + +E +E L LEIW NGS+TP++++ +A+ L+N F PF
Sbjct: 164 PIDAIFMPVRKVNYMVEEIFLRNSEIKERLILEIWRNGSVTPQDSISQAAEVLLNLFNPF 223
Query: 77 QHVEEE 60
+ + E
Sbjct: 224 KKINFE 229
[228][TOP]
>UniRef100_Q85FU3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cyanidioschyzon
merolae RepID=RPOA_CYAME
Length = 316
Score = 57.0 bits (136), Expect = 6e-07
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = -2
Query: 254 PMDAVFMPVENANHSIH-SYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPF 78
P+D VFMPV+ N + + + + L LEIWTNGS++P+EALH+A+ L + F P
Sbjct: 170 PIDGVFMPVKRVNFWVDKALVDKVLVDKALHLEIWTNGSISPQEALHQAARILTHWFNPL 229
Query: 77 QHVEEETLYLENNQHQVTL 21
Q +E +T + +N Q L
Sbjct: 230 QTLEWKTSHTKNEQTMAQL 248
[229][TOP]
>UniRef100_Q3MF97 DNA-directed RNA polymerase subunit alpha n=1 Tax=Anabaena
variabilis ATCC 29413 RepID=RPOA_ANAVT
Length = 315
Score = 57.0 bits (136), Expect = 6e-07
Identities = 26/65 (40%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSY-GNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
+D++FMPV N+S+ +G+ ++ L LE+WTNGS++P+EAL A+G L++ F P +
Sbjct: 166 IDSIFMPVRKVNYSVEEVRADGSIPKDRLLLEVWTNGSISPQEALSSAAGILVDLFNPLK 225
Query: 74 HVEEE 60
+ E
Sbjct: 226 DISLE 230
[230][TOP]
>UniRef100_Q8YPK3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nostoc sp. PCC
7120 RepID=RPOA_ANASP
Length = 315
Score = 57.0 bits (136), Expect = 6e-07
Identities = 26/65 (40%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSY-GNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
+D++FMPV N+S+ +G+ ++ L LE+WTNGS++P+EAL A+G L++ F P +
Sbjct: 166 IDSIFMPVRKVNYSVEEVRADGSIPKDRLLLEVWTNGSISPQEALSSAAGILVDLFNPLK 225
Query: 74 HVEEE 60
+ E
Sbjct: 226 DISLE 230
[231][TOP]
>UniRef100_A0ZG51 DNA-directed RNA polymerase alpha subunit n=1 Tax=Nodularia
spumigena CCY9414 RepID=A0ZG51_NODSP
Length = 315
Score = 56.6 bits (135), Expect = 8e-07
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -2
Query: 251 MDAVFMPVENANHSIH-SYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
+D+VFMPV N+S+ + G + ++ L LE+WTNGS++P+EAL A+G L+ F P +
Sbjct: 166 IDSVFMPVRKVNYSVEEARGESSIPKDRLLLEVWTNGSISPQEALSSAAGILVELFNPLK 225
Query: 74 HVEEE 60
+ E
Sbjct: 226 DISLE 230
[232][TOP]
>UniRef100_Q6J224 RNA polymerase alpha subunit (Fragment) n=1 Tax=Thalassionema
frauenfeldii RepID=Q6J224_9STRA
Length = 298
Score = 56.6 bits (135), Expect = 8e-07
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Frame = -2
Query: 275 NFEDRSY-PMDAVFMPVENANHSIHS-YGNGNEKQEILFLEIWTNGSLTPKEALHRASGN 102
N E++++ +D++FMPV+ N I + Y N E L LEIWTNGS+ P EAL +A
Sbjct: 156 NDENKNFLQIDSIFMPVQKVNFKIENLYDADNSISERLILEIWTNGSIEPIEALKKACKI 215
Query: 101 LIN*F---IPFQHVEEETLYLENNQHQVTLPF 15
+IN F + Q+ +E T NN+ P+
Sbjct: 216 IINCFNSLLKTQNTKETTKKTSNNRKLTIEPY 247
[233][TOP]
>UniRef100_B8HMS8 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Cyanothece sp.
PCC 7425 RepID=B8HMS8_CYAP4
Length = 314
Score = 56.2 bits (134), Expect = 1e-06
Identities = 27/62 (43%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSYGNGN-EKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
+DA+FMPV N+++ +G +++ L LEIWTNGSLTP+EAL++ + L++ F P +
Sbjct: 165 IDAIFMPVRKVNYTVEDARSGGLVEKDRLVLEIWTNGSLTPQEALNQGASILVDLFNPLK 224
Query: 74 HV 69
V
Sbjct: 225 DV 226
[234][TOP]
>UniRef100_B4VPM9 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Microcoleus
chthonoplastes PCC 7420 RepID=B4VPM9_9CYAN
Length = 315
Score = 56.2 bits (134), Expect = 1e-06
Identities = 26/63 (41%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSYG-NGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
+DAVFMPV N+S+ +G+ +++ L L++WTNGS++P+EAL +A+ L++ F P +
Sbjct: 166 LDAVFMPVTKVNYSVEDTRVDGSLEKDRLILDVWTNGSVSPQEALSQAANILVDLFNPLK 225
Query: 74 HVE 66
+E
Sbjct: 226 DIE 228
[235][TOP]
>UniRef100_P73297 DNA-directed RNA polymerase subunit alpha n=1 Tax=Synechocystis sp.
PCC 6803 RepID=RPOA_SYNY3
Length = 314
Score = 56.2 bits (134), Expect = 1e-06
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSY-GNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
+D+VFMPV N+++ +G ++ L L+IWTNGS+ P+EAL AS + N FIP +
Sbjct: 166 IDSVFMPVTKVNYTVEDIRADGMSPKDRLILDIWTNGSIQPREALSEASDIIANLFIPLK 225
Query: 74 HVEE 63
+ E
Sbjct: 226 DLNE 229
[236][TOP]
>UniRef100_Q2JL74 DNA-directed RNA polymerase subunit alpha n=1 Tax=Synechococcus sp.
JA-2-3B'a(2-13) RepID=RPOA_SYNJB
Length = 335
Score = 56.2 bits (134), Expect = 1e-06
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSYGNGNE-KQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
+D+VFMPV N+++ + G +++ L LEIWTNGSLTP+EAL +A+ L+ F P Q
Sbjct: 186 IDSVFMPVRKVNYAVEAARVGQFLEKDRLVLEIWTNGSLTPQEALSQAARILVGLFAPLQ 245
Query: 74 HV 69
V
Sbjct: 246 EV 247
[237][TOP]
>UniRef100_P49465 DNA-directed RNA polymerase subunit alpha n=1 Tax=Odontella
sinensis RepID=RPOA_ODOSI
Length = 312
Score = 56.2 bits (134), Expect = 1e-06
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 10/83 (12%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHS-YGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*F---- 87
+DA+FMPV+ + I + Y N N+ E LFL+IWTNGS++P+EA+ AS +I+ F
Sbjct: 165 IDAIFMPVQKVDFKIENIYDNSNDLTERLFLDIWTNGSMSPEEAVSSASRFIISFFSSLL 224
Query: 86 ---IPFQHVEEE--TLYLENNQH 33
+P + E E TL N H
Sbjct: 225 ENKLPQETKESENKTLSAPKNPH 247
[238][TOP]
>UniRef100_B5YDX0 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Dictyoglomus
thermophilum H-6-12 RepID=B5YDX0_DICT6
Length = 324
Score = 55.8 bits (133), Expect = 1e-06
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 15/98 (15%)
Frame = -2
Query: 269 EDRSYP-----MDAVFMPVENANHSIHSYGNGNEKQ-EILFLEIWTNGSLTPKEALHRAS 108
+D++YP +D++F PV+ ++++ G + L LEIWTNGS++P+EA AS
Sbjct: 152 KDQNYPIGVLVLDSIFSPVKKVSYTVEKTRVGRRTDLDRLILEIWTNGSISPEEAFREAS 211
Query: 107 GNLIN*F---------IPFQHVEEETLYLENNQHQVTL 21
L+ F +P++ V+ E YLE + +TL
Sbjct: 212 RILMEYFRLLNEKEFQLPYEEVKPENTYLEEEKKGLTL 249
[239][TOP]
>UniRef100_B0JY38 RNA polymerase alpha subunit n=1 Tax=Microcystis aeruginosa
NIES-843 RepID=B0JY38_MICAN
Length = 313
Score = 55.8 bits (133), Expect = 1e-06
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSY-GNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
+D++FMPV N+S+ + ++ L LEIWTNGS+ PKEAL +A+ L+N F P +
Sbjct: 166 IDSIFMPVTKVNYSVEDIRSESGQARDRLLLEIWTNGSINPKEALSQAADMLVNLFNPLK 225
[240][TOP]
>UniRef100_A8YCU3 RpoA protein n=1 Tax=Microcystis aeruginosa PCC 7806
RepID=A8YCU3_MICAE
Length = 313
Score = 55.8 bits (133), Expect = 1e-06
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSY-GNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
+D++FMPV N+S+ + ++ L LEIWTNGS+ PKEAL +A+ L+N F P +
Sbjct: 166 IDSIFMPVTKVNYSVEDIRSESGQARDRLLLEIWTNGSINPKEALSQAADMLVNLFNPLK 225
[241][TOP]
>UniRef100_B7KI11 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Cyanothece sp.
PCC 7424 RepID=B7KI11_CYAP7
Length = 314
Score = 55.5 bits (132), Expect = 2e-06
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSYG-NGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
+D+VFMPV N+S+ +G ++ L LEIWTNGS+ PKEAL A+ +++ F P +
Sbjct: 166 IDSVFMPVTKVNYSVEDVRVDGTGSKDRLTLEIWTNGSINPKEALSEAAAIIVDLFSPLK 225
Query: 74 HVEE 63
+ E
Sbjct: 226 DLNE 229
[242][TOP]
>UniRef100_C7QS38 DNA-directed RNA polymerase, alpha subunit n=2 Tax=Cyanothece
RepID=C7QS38_CYAP0
Length = 316
Score = 55.5 bits (132), Expect = 2e-06
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSY-GNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
+DAVFMPV N+ + G E Q+ L LEIWTNGS PKEAL A+ +++ F P +
Sbjct: 168 IDAVFMPVTKVNYIVEDIRGEHGEAQDRLILEIWTNGSFNPKEALSEAAEIVVDLFSPLK 227
Query: 74 HVEE 63
+ +
Sbjct: 228 DLNQ 231
[243][TOP]
>UniRef100_A0T0Z4 DNA-directed RNA polymerase subunit alpha n=1 Tax=Thalassiosira
pseudonana RepID=RPOA_THAPS
Length = 313
Score = 55.5 bits (132), Expect = 2e-06
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Frame = -2
Query: 281 SNNFEDRSYPMDAVFMPVENANHSIHS-YGNGNEKQEILFLEIWTNGSLTPKEALHRASG 105
S+ FED DA+FMPV+ + + + Y N N +E L ++IWTNGS++P++A+ S
Sbjct: 158 SDKFED-FIETDAIFMPVQKVDFKVENVYDNSNNIKERLLIDIWTNGSISPEQAIFSGSN 216
Query: 104 NLIN*F--IPFQHVEEETLYLENNQH 33
+IN F I Q + +E ++ H
Sbjct: 217 LIINLFKSIGEQKINKEKENIKEKNH 242
[244][TOP]
>UniRef100_B1XJI4 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Synechococcus
sp. PCC 7002 RepID=B1XJI4_SYNP2
Length = 313
Score = 55.1 bits (131), Expect = 2e-06
Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHS-YGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
+DAVFMPV N+S+ S + G+ ++ L LEIWTNGS+ P+EAL +A+ + F P +
Sbjct: 166 IDAVFMPVTKVNYSVDSIHSEGDAVRDRLTLEIWTNGSIKPEEALSQAAAIAVELFNPLK 225
Query: 74 HVEEETL 54
+ E +
Sbjct: 226 DLTLEAI 232
[245][TOP]
>UniRef100_B4B3P8 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Cyanothece sp.
PCC 7822 RepID=B4B3P8_9CHRO
Length = 314
Score = 55.1 bits (131), Expect = 2e-06
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSYG-NGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
+D+VFMPV N+S+ +G ++ L +EIWTNGS+ PKEAL A+ +++ F P +
Sbjct: 166 IDSVFMPVTKVNYSVEDVRVDGTSSKDRLTIEIWTNGSVNPKEALSEAAAIIVDLFSPLR 225
Query: 74 HVEE 63
+ E
Sbjct: 226 DLNE 229
[246][TOP]
>UniRef100_Q110D1 DNA-directed RNA polymerase subunit alpha n=1 Tax=Trichodesmium
erythraeum IMS101 RepID=RPOA_TRIEI
Length = 314
Score = 54.7 bits (130), Expect = 3e-06
Identities = 26/62 (41%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSYGNGNE-KQEILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
+DA+FMPV N++I G+ +Q+ L ++IWTNGS TP++AL A+G L++ F P +
Sbjct: 166 IDAIFMPVRKVNYTIEDAHIGSSLEQDRLIMDIWTNGSYTPQDALSNAAGILMSLFEPLK 225
Query: 74 HV 69
+
Sbjct: 226 DI 227
[247][TOP]
>UniRef100_Q9MUV0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Mesostigma viride
RepID=RPOA_MESVI
Length = 316
Score = 54.7 bits (130), Expect = 3e-06
Identities = 25/67 (37%), Positives = 37/67 (55%)
Frame = -2
Query: 260 SYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FIP 81
S P+DA+FMP+ N+ + E + LEIWTNGS++P++AL +I+ F P
Sbjct: 168 SLPVDAIFMPIHKVNYMVEQDHTSKFLTERVILEIWTNGSISPRDALDIGIKKVIDLFNP 227
Query: 80 FQHVEEE 60
H E
Sbjct: 228 LHHCSSE 234
[248][TOP]
>UniRef100_Q31L30 DNA-directed RNA polymerase subunit alpha n=2 Tax=Synechococcus
elongatus RepID=RPOA_SYNE7
Length = 309
Score = 54.3 bits (129), Expect = 4e-06
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = -2
Query: 251 MDAVFMPVENANHSIHSYGNGNEKQ-EILFLEIWTNGSLTPKEALHRASGNLIN*FIPFQ 75
+DAVFMPV N+S+ G + L LE+WTNGSL+P+EAL +A+ L+ F P +
Sbjct: 165 LDAVFMPVRRVNYSVEDARVGESTAIDRLVLEVWTNGSLSPQEALSQAASCLVALFEPLK 224
Query: 74 HV 69
+V
Sbjct: 225 NV 226
[249][TOP]
>UniRef100_Q20F02 DNA-directed RNA polymerase subunit alpha n=1 Tax=Oltmannsiellopsis
viridis RepID=RPOA_OLTVI
Length = 508
Score = 54.3 bits (129), Expect = 4e-06
Identities = 25/62 (40%), Positives = 40/62 (64%)
Frame = -2
Query: 263 RSYPMDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN*FI 84
++ P+D +FMP++ N+ I +E + LEIWTNGS+ P++A+H A+ LI+ F
Sbjct: 316 QALPVDTLFMPIKKVNYMI-DIDPAEPDRESVVLEIWTNGSIHPRQAVHEAAKQLIHLFS 374
Query: 83 PF 78
PF
Sbjct: 375 PF 376
[250][TOP]
>UniRef100_Q6J223 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cylindrotheca
fusiformis RepID=Q6J223_CYLFU
Length = 291
Score = 53.5 bits (127), Expect = 7e-06
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = -2
Query: 266 DRSYPMDAVFMPVENANHSIHS-YGNGNEKQEILFLEIWTNGSLTPKEALHRASGNLIN* 90
D +D +FMPV+ N I + Y N N E +FL+IWTNGS++P EAL A+ I+
Sbjct: 152 DNYLQLDTIFMPVQKVNFKIENVYDNNNNITEQVFLDIWTNGSISPNEALKSAAQITIDL 211
Query: 89 F 87
F
Sbjct: 212 F 212