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[1][TOP]
>UniRef100_P18616 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Arabidopsis
thaliana RepID=RPB1_ARATH
Length = 1840
Score = 257 bits (656), Expect = 3e-67
Identities = 123/123 (100%), Positives = 123/123 (100%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL
Sbjct: 527 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 586
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN
Sbjct: 587 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 646
Query: 362 GSL 370
GSL
Sbjct: 647 GSL 649
[2][TOP]
>UniRef100_B7SNW8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Drimys winteri
RepID=B7SNW8_DRIWI
Length = 1010
Score = 243 bits (620), Expect = 5e-63
Identities = 115/123 (93%), Positives = 119/123 (96%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGKVPAPAILKPRPL
Sbjct: 444 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPL 503
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+R SAWH++TETGFITPGDTQVRIERGELL GTLCKKTLGTS
Sbjct: 504 WTGKQVFNLIIPKQINLIRQSAWHSETETGFITPGDTQVRIERGELLCGTLCKKTLGTST 563
Query: 362 GSL 370
GSL
Sbjct: 564 GSL 566
[3][TOP]
>UniRef100_UPI0001985649 PREDICTED: similar to NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA
binding / DNA-directed RNA polymerase n=1 Tax=Vitis
vinifera RepID=UPI0001985649
Length = 1848
Score = 242 bits (617), Expect = 1e-62
Identities = 114/123 (92%), Positives = 120/123 (97%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGK+PAPAILKPRPL
Sbjct: 525 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPL 584
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINLLR SAWH+++ETGFITPGDTQVRIE+GELLAGTLCKKTLGTS
Sbjct: 585 WTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTST 644
Query: 362 GSL 370
GSL
Sbjct: 645 GSL 647
[4][TOP]
>UniRef100_B7SNX5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Saruma henryi
RepID=B7SNX5_SARHE
Length = 1009
Score = 242 bits (617), Expect = 1e-62
Identities = 114/123 (92%), Positives = 119/123 (96%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGK+PAPA+LKPRPL
Sbjct: 443 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAVLKPRPL 502
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINLLR SAWHA++ETGFITPGDTQVRIERGELLAGTLCKK LGTS
Sbjct: 503 WTGKQVFNLIIPKQINLLRTSAWHAESETGFITPGDTQVRIERGELLAGTLCKKALGTST 562
Query: 362 GSL 370
GSL
Sbjct: 563 GSL 565
[5][TOP]
>UniRef100_A7NVN6 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
RepID=A7NVN6_VITVI
Length = 707
Score = 242 bits (617), Expect = 1e-62
Identities = 114/123 (92%), Positives = 120/123 (97%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGK+PAPAILKPRPL
Sbjct: 478 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPL 537
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINLLR SAWH+++ETGFITPGDTQVRIE+GELLAGTLCKKTLGTS
Sbjct: 538 WTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTST 597
Query: 362 GSL 370
GSL
Sbjct: 598 GSL 600
[6][TOP]
>UniRef100_B7SNX0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Liriodendron
tulipifera RepID=B7SNX0_LIRTU
Length = 1010
Score = 241 bits (616), Expect = 1e-62
Identities = 113/123 (91%), Positives = 119/123 (96%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGK+PAPA+LKPRPL
Sbjct: 444 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAVLKPRPL 503
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+R SAWH++ ETGFITPGDTQVRIERGELLAGTLCKKTLGTS
Sbjct: 504 WTGKQVFNLIIPKQINLIRTSAWHSEAETGFITPGDTQVRIERGELLAGTLCKKTLGTST 563
Query: 362 GSL 370
GSL
Sbjct: 564 GSL 566
[7][TOP]
>UniRef100_Q71ET6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Magnolia x
soulangeana RepID=Q71ET6_MAGSO
Length = 1010
Score = 240 bits (613), Expect = 3e-62
Identities = 113/123 (91%), Positives = 118/123 (95%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGK+PAP ILKPRPL
Sbjct: 444 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPTILKPRPL 503
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+R SAWH++ ETGFITPGDTQVRIERGELLAGTLCKKTLGTS
Sbjct: 504 WTGKQVFNLIIPKQINLIRTSAWHSEAETGFITPGDTQVRIERGELLAGTLCKKTLGTST 563
Query: 362 GSL 370
GSL
Sbjct: 564 GSL 566
[8][TOP]
>UniRef100_Q71ET5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nymphaea odorata
RepID=Q71ET5_NYMOD
Length = 1013
Score = 240 bits (613), Expect = 3e-62
Identities = 111/123 (90%), Positives = 121/123 (98%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGK+PAPAI+KPRPL
Sbjct: 447 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAIMKPRPL 506
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+RYSAWH+++ETGFITPGDT VRIERGELL+GTLCKKT+GTS+
Sbjct: 507 WTGKQVFNLIIPKQINLIRYSAWHSESETGFITPGDTCVRIERGELLSGTLCKKTMGTSS 566
Query: 362 GSL 370
GSL
Sbjct: 567 GSL 569
[9][TOP]
>UniRef100_Q71ET4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Amborella trichopoda
RepID=Q71ET4_AMBTC
Length = 1013
Score = 240 bits (613), Expect = 3e-62
Identities = 112/123 (91%), Positives = 121/123 (98%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGK+PAPAILKPRPL
Sbjct: 447 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPL 506
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+RYSAWH+++E+GFITPGDT VRIERGELL+GTLCKKTLGTS+
Sbjct: 507 WTGKQVFNLIIPKQINLIRYSAWHSESESGFITPGDTCVRIERGELLSGTLCKKTLGTSS 566
Query: 362 GSL 370
GSL
Sbjct: 567 GSL 569
[10][TOP]
>UniRef100_Q6T3T2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Magnolia x
soulangeana RepID=Q6T3T2_MAGSO
Length = 280
Score = 240 bits (613), Expect = 3e-62
Identities = 113/123 (91%), Positives = 118/123 (95%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGK+PAP ILKPRPL
Sbjct: 25 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPTILKPRPL 84
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+R SAWH++ ETGFITPGDTQVRIERGELLAGTLCKKTLGTS
Sbjct: 85 WTGKQVFNLIIPKQINLIRTSAWHSEAETGFITPGDTQVRIERGELLAGTLCKKTLGTST 144
Query: 362 GSL 370
GSL
Sbjct: 145 GSL 147
[11][TOP]
>UniRef100_Q6T3S8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nymphaea odorata
RepID=Q6T3S8_NYMOD
Length = 280
Score = 240 bits (613), Expect = 3e-62
Identities = 111/123 (90%), Positives = 121/123 (98%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGK+PAPAI+KPRPL
Sbjct: 25 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAIMKPRPL 84
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+RYSAWH+++ETGFITPGDT VRIERGELL+GTLCKKT+GTS+
Sbjct: 85 WTGKQVFNLIIPKQINLIRYSAWHSESETGFITPGDTCVRIERGELLSGTLCKKTMGTSS 144
Query: 362 GSL 370
GSL
Sbjct: 145 GSL 147
[12][TOP]
>UniRef100_B7SNW7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ceratophyllum
demersum RepID=B7SNW7_CERDE
Length = 1010
Score = 240 bits (613), Expect = 3e-62
Identities = 113/123 (91%), Positives = 118/123 (95%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGK+PAP ILKPRPL
Sbjct: 444 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPTILKPRPL 503
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+R SAWH++ ETGFITPGDTQVRIERGELLAGTLCKKTLGTS
Sbjct: 504 WTGKQVFNLIIPKQINLIRTSAWHSEAETGFITPGDTQVRIERGELLAGTLCKKTLGTST 563
Query: 362 GSL 370
GSL
Sbjct: 564 GSL 566
[13][TOP]
>UniRef100_B7SNW6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Beta vulgaris
RepID=B7SNW6_BETVU
Length = 1012
Score = 240 bits (613), Expect = 3e-62
Identities = 113/123 (91%), Positives = 118/123 (95%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGK+PAP ILKPRPL
Sbjct: 446 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPTILKPRPL 505
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+R SAWH++ ETGFITPGDTQVRIERGELLAGTLCKKTLGTS
Sbjct: 506 WTGKQVFNLIIPKQINLIRTSAWHSEAETGFITPGDTQVRIERGELLAGTLCKKTLGTST 565
Query: 362 GSL 370
GSL
Sbjct: 566 GSL 568
[14][TOP]
>UniRef100_B7SNX1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nicotiana tabacum
RepID=B7SNX1_TOBAC
Length = 1010
Score = 239 bits (611), Expect = 5e-62
Identities = 115/123 (93%), Positives = 117/123 (95%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGKVPAPAILKPRPL
Sbjct: 444 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPL 503
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINLLRYSAWH D+E G ITPGDTQVRIE+GELL GTLCKKTLGTS
Sbjct: 504 WTGKQVFNLIIPKQINLLRYSAWHNDSEKGPITPGDTQVRIEKGELLTGTLCKKTLGTST 563
Query: 362 GSL 370
GSL
Sbjct: 564 GSL 566
[15][TOP]
>UniRef100_Q1L5Y6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum lycopersicum
RepID=Q1L5Y6_SOLLC
Length = 773
Score = 239 bits (610), Expect = 7e-62
Identities = 112/123 (91%), Positives = 117/123 (95%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQANRPVMGIVQDTLLGCRK+TKRDTFIEKDVFMN LMWWEDFDGKVPAP ILKPRPL
Sbjct: 202 VSPQANRPVMGIVQDTLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPL 261
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINLLRYS WH D+E G+ITPGDTQVRIE+GELL+GTLCKKTLGTS
Sbjct: 262 WTGKQVFNLIIPKQINLLRYSVWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTST 321
Query: 362 GSL 370
GSL
Sbjct: 322 GSL 324
[16][TOP]
>UniRef100_B7SNX3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Persea americana
RepID=B7SNX3_PERAE
Length = 1009
Score = 239 bits (609), Expect = 9e-62
Identities = 112/123 (91%), Positives = 119/123 (96%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGK+PAPAILKPRPL
Sbjct: 443 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPL 502
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+ SAWH+++ETGFITPGDTQVRIE+GELLAGTLCKKTLGTS
Sbjct: 503 WTGKQVFNLIIPKQINLIXTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTST 562
Query: 362 GSL 370
GSL
Sbjct: 563 GSL 565
[17][TOP]
>UniRef100_Q2TUN9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Thuja occidentalis
RepID=Q2TUN9_THUOC
Length = 1013
Score = 238 bits (608), Expect = 1e-61
Identities = 110/123 (89%), Positives = 120/123 (97%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGK+PAP ILKPRPL
Sbjct: 447 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPTILKPRPL 506
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+RYSAWHA++ETGFITPGDT VRIE+GE+++GTLCKKTLGTS+
Sbjct: 507 WTGKQVFNLIIPKQINLIRYSAWHAESETGFITPGDTCVRIEKGEVISGTLCKKTLGTSS 566
Query: 362 GSL 370
GSL
Sbjct: 567 GSL 569
[18][TOP]
>UniRef100_Q1L5Y7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Antirrhinum majus
RepID=Q1L5Y7_ANTMA
Length = 780
Score = 238 bits (608), Expect = 1e-61
Identities = 113/123 (91%), Positives = 115/123 (93%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGKVPAP ILKPRPL
Sbjct: 202 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPL 261
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINLLRYSAWH + E GFITPGDTQVRIE+GELL GTLCKKTLGT
Sbjct: 262 WTGKQVFNLIIPKQINLLRYSAWHQEKEKGFITPGDTQVRIEKGELLTGTLCKKTLGTGT 321
Query: 362 GSL 370
GSL
Sbjct: 322 GSL 324
[19][TOP]
>UniRef100_A7R1R1 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
RepID=A7R1R1_VITVI
Length = 708
Score = 238 bits (608), Expect = 1e-61
Identities = 112/123 (91%), Positives = 118/123 (95%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFI KDVFMN LMWWEDFDGK+PAPAILKPRPL
Sbjct: 526 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIAKDVFMNILMWWEDFDGKIPAPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WT KQVFNLIIPKQINLLRYSAWH++ ETGF+TPGDTQVRIERGELL+GTLCKKTLGTS
Sbjct: 586 WTRKQVFNLIIPKQINLLRYSAWHSECETGFLTPGDTQVRIERGELLSGTLCKKTLGTST 645
Query: 362 GSL 370
GSL
Sbjct: 646 GSL 648
[20][TOP]
>UniRef100_B7SNX2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Papaver orientale
RepID=B7SNX2_PAPOR
Length = 1010
Score = 238 bits (607), Expect = 2e-61
Identities = 113/123 (91%), Positives = 116/123 (94%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGKVPAP ILKPRPL
Sbjct: 444 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPL 503
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINLLR SAWH++ ETGFITPGDTQVRIERGELL GTLCKK LGTS
Sbjct: 504 WTGKQVFNLIIPKQINLLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTST 563
Query: 362 GSL 370
GSL
Sbjct: 564 GSL 566
[21][TOP]
>UniRef100_B7SNW9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Illicium parviflorum
RepID=B7SNW9_ILLPA
Length = 1013
Score = 238 bits (607), Expect = 2e-61
Identities = 111/123 (90%), Positives = 119/123 (96%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGK+PAPAILKPRPL
Sbjct: 447 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPL 506
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+R SAWH+++ETGFITPGDT VRIE+GELL+GTLCKKTLGTS
Sbjct: 507 WTGKQVFNLIIPKQINLIRTSAWHSESETGFITPGDTHVRIEKGELLSGTLCKKTLGTST 566
Query: 362 GSL 370
GSL
Sbjct: 567 GSL 569
[22][TOP]
>UniRef100_B7SNW5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Asparagus
officinalis RepID=B7SNW5_ASPOF
Length = 1009
Score = 237 bits (604), Expect = 3e-61
Identities = 112/123 (91%), Positives = 117/123 (95%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGKVP PAILKPRPL
Sbjct: 445 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPTPAILKPRPL 504
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL R SAWH+++ETGFITPGDTQVRIE+GELL GTLCKKTLGTS
Sbjct: 505 WTGKQVFNLIIPKQINLSRASAWHSESETGFITPGDTQVRIEKGELLTGTLCKKTLGTST 564
Query: 362 GSL 370
GSL
Sbjct: 565 GSL 567
[23][TOP]
>UniRef100_Q71EU1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Zamia muricata
RepID=Q71EU1_9SPER
Length = 1013
Score = 236 bits (602), Expect = 6e-61
Identities = 108/123 (87%), Positives = 120/123 (97%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGK+P+P ILKPRPL
Sbjct: 447 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPSPTILKPRPL 506
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIP+QINL+RYSAWH+++ETGFITPGDT VRIE+GE+L+GTLCKKTLGTS+
Sbjct: 507 WTGKQVFNLIIPRQINLIRYSAWHSESETGFITPGDTVVRIEKGEVLSGTLCKKTLGTSS 566
Query: 362 GSL 370
GSL
Sbjct: 567 GSL 569
[24][TOP]
>UniRef100_Q2TUN8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Taxus canadensis
RepID=Q2TUN8_TAXCA
Length = 1013
Score = 236 bits (602), Expect = 6e-61
Identities = 110/123 (89%), Positives = 119/123 (96%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGK+PAP ILKPRPL
Sbjct: 447 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPTILKPRPL 506
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+R SAWHA++ETGFITPGDT VRIE+GE+L+GTLCKKTLGTS+
Sbjct: 507 WTGKQVFNLIIPKQINLIRQSAWHAESETGFITPGDTIVRIEKGEVLSGTLCKKTLGTSS 566
Query: 362 GSL 370
GSL
Sbjct: 567 GSL 569
[25][TOP]
>UniRef100_Q6T3T3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cycas revoluta
RepID=Q6T3T3_CYCRE
Length = 280
Score = 236 bits (601), Expect = 8e-61
Identities = 108/123 (87%), Positives = 120/123 (97%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGK+P+P ILKPRPL
Sbjct: 25 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPSPTILKPRPL 84
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIP+QINL+RYSAWH+++ETGFITPGDT VRIE+GE+L+GTLCKKTLGTS+
Sbjct: 85 WTGKQVFNLIIPRQINLIRYSAWHSESETGFITPGDTCVRIEKGEVLSGTLCKKTLGTSS 144
Query: 362 GSL 370
GSL
Sbjct: 145 GSL 147
[26][TOP]
>UniRef100_Q2TUN6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba
RepID=Q2TUN6_GINBI
Length = 1013
Score = 235 bits (600), Expect = 1e-60
Identities = 107/123 (86%), Positives = 120/123 (97%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRK+TKRDTFIEKDVFMN LMWWEDFDGK+P+P ILKPRPL
Sbjct: 447 VSPQSNRPVMGIVQDTLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPSPTILKPRPL 506
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIP+QINL+RYSAWH+++ETGFITPGDT VRIE+GE+L+GTLCKKTLGTS+
Sbjct: 507 WTGKQVFNLIIPRQINLIRYSAWHSESETGFITPGDTCVRIEKGEVLSGTLCKKTLGTSS 566
Query: 362 GSL 370
GSL
Sbjct: 567 GSL 569
[27][TOP]
>UniRef100_B9FZ53 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9FZ53_ORYSJ
Length = 804
Score = 234 bits (598), Expect = 2e-60
Identities = 109/123 (88%), Positives = 117/123 (95%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDT IEKDVFMN LMWWEDFDGKVPAPAILKPRP+
Sbjct: 456 VSPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILKPRPI 515
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPK INL+R+SAWH++ ETGFITPGDT VRIE+GELL+GTLCKKTLGTS
Sbjct: 516 WTGKQVFNLIIPKPINLIRFSAWHSEAETGFITPGDTMVRIEKGELLSGTLCKKTLGTST 575
Query: 362 GSL 370
GSL
Sbjct: 576 GSL 578
[28][TOP]
>UniRef100_B8BAW1 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group
RepID=B8BAW1_ORYSI
Length = 1449
Score = 234 bits (598), Expect = 2e-60
Identities = 109/123 (88%), Positives = 117/123 (95%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDT IEKDVFMN LMWWEDFDGKVPAPAILKPRP+
Sbjct: 495 VSPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILKPRPI 554
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPK INL+R+SAWH++ ETGFITPGDT VRIE+GELL+GTLCKKTLGTS
Sbjct: 555 WTGKQVFNLIIPKPINLIRFSAWHSEAETGFITPGDTMVRIEKGELLSGTLCKKTLGTST 614
Query: 362 GSL 370
GSL
Sbjct: 615 GSL 617
[29][TOP]
>UniRef100_Q71EU0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cycas revoluta
RepID=Q71EU0_CYCRE
Length = 1013
Score = 234 bits (596), Expect = 3e-60
Identities = 107/123 (86%), Positives = 120/123 (97%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWE+FDGK+P+P ILKPRPL
Sbjct: 447 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWENFDGKIPSPTILKPRPL 506
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIP+QINL+RYSAWH+++ETGFITPGDT VRIE+GE+L+GTLCKKTLGTS+
Sbjct: 507 WTGKQVFNLIIPRQINLIRYSAWHSESETGFITPGDTCVRIEKGEVLSGTLCKKTLGTSS 566
Query: 362 GSL 370
GSL
Sbjct: 567 GSL 569
[30][TOP]
>UniRef100_Q6T3T1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba
RepID=Q6T3T1_GINBI
Length = 280
Score = 234 bits (596), Expect = 3e-60
Identities = 106/123 (86%), Positives = 120/123 (97%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSP++NRPVMGIVQDTLLGCRK+TKRDTFIEKDVFMN LMWWEDFDGK+P+P ILKPRPL
Sbjct: 25 VSPKSNRPVMGIVQDTLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPSPTILKPRPL 84
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIP+QINL+RYSAWH+++ETGFITPGDT VRIE+GE+L+GTLCKKTLGTS+
Sbjct: 85 WTGKQVFNLIIPRQINLIRYSAWHSESETGFITPGDTCVRIEKGEVLSGTLCKKTLGTSS 144
Query: 362 GSL 370
GSL
Sbjct: 145 GSL 147
[31][TOP]
>UniRef100_Q2TUN7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Podocarpus
macrophyllus RepID=Q2TUN7_9CONI
Length = 1013
Score = 234 bits (596), Expect = 3e-60
Identities = 108/123 (87%), Positives = 118/123 (95%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGK+P+PAILKPRPL
Sbjct: 447 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPSPAILKPRPL 506
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+RYSAWHA++ETGF+T GDT V IE+GE+L+GTLCKKTLGTS
Sbjct: 507 WTGKQVFNLIIPKQINLIRYSAWHAESETGFLTAGDTVVHIEKGEVLSGTLCKKTLGTST 566
Query: 362 GSL 370
GSL
Sbjct: 567 GSL 569
[32][TOP]
>UniRef100_Q1L5Z5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhododendron
macrophyllum RepID=Q1L5Z5_RHOMC
Length = 589
Score = 234 bits (596), Expect = 3e-60
Identities = 110/123 (89%), Positives = 117/123 (95%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGK+PAPAILKP+PL
Sbjct: 34 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPKPL 93
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINLLR SAWHA++ETG ITPGDT VRIE+GE++ GTLCKKTLGTS
Sbjct: 94 WTGKQVFNLIIPKQINLLRTSAWHAESETGPITPGDTHVRIEKGEVITGTLCKKTLGTST 153
Query: 362 GSL 370
GSL
Sbjct: 154 GSL 156
[33][TOP]
>UniRef100_UPI0000E12351 Os05g0151000 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000E12351
Length = 2085
Score = 232 bits (592), Expect = 8e-60
Identities = 108/123 (87%), Positives = 116/123 (94%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDT IEKDVFMN LMWWEDFDGKVPAPAILKPRP+
Sbjct: 526 VSPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILKPRPI 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+R+S WH++ ET FITPGDT VRIE+GELL+GTLCKKTLGTS
Sbjct: 586 WTGKQVFNLIIPKQINLIRFSGWHSEAETRFITPGDTMVRIEKGELLSGTLCKKTLGTST 645
Query: 362 GSL 370
GSL
Sbjct: 646 GSL 648
[34][TOP]
>UniRef100_Q5WMZ9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q5WMZ9_ORYSJ
Length = 1741
Score = 232 bits (592), Expect = 8e-60
Identities = 108/123 (87%), Positives = 116/123 (94%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDT IEKDVFMN LMWWEDFDGKVPAPAILKPRP+
Sbjct: 473 VSPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILKPRPI 532
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+R+S WH++ ET FITPGDT VRIE+GELL+GTLCKKTLGTS
Sbjct: 533 WTGKQVFNLIIPKQINLIRFSGWHSEAETRFITPGDTMVRIEKGELLSGTLCKKTLGTST 592
Query: 362 GSL 370
GSL
Sbjct: 593 GSL 595
[35][TOP]
>UniRef100_Q0DKN9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q0DKN9_ORYSJ
Length = 1834
Score = 232 bits (592), Expect = 8e-60
Identities = 108/123 (87%), Positives = 116/123 (94%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDT IEKDVFMN LMWWEDFDGKVPAPAILKPRP+
Sbjct: 526 VSPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILKPRPI 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+R+S WH++ ET FITPGDT VRIE+GELL+GTLCKKTLGTS
Sbjct: 586 WTGKQVFNLIIPKQINLIRFSGWHSEAETRFITPGDTMVRIEKGELLSGTLCKKTLGTST 645
Query: 362 GSL 370
GSL
Sbjct: 646 GSL 648
[36][TOP]
>UniRef100_B9SXC0 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9SXC0_RICCO
Length = 1855
Score = 232 bits (591), Expect = 1e-59
Identities = 109/123 (88%), Positives = 117/123 (95%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGKVPAPAILKPRPL
Sbjct: 525 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPL 584
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+R +AWH+D+E G ITPGDT VRIE+GELL+GT+CKKTLGTS
Sbjct: 585 WTGKQVFNLIIPKQINLIRTAAWHSDSERGVITPGDTLVRIEKGELLSGTVCKKTLGTST 644
Query: 362 GSL 370
GSL
Sbjct: 645 GSL 647
[37][TOP]
>UniRef100_C5YGY9 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5YGY9_SORBI
Length = 1857
Score = 229 bits (585), Expect = 5e-59
Identities = 105/123 (85%), Positives = 116/123 (94%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDT IEKDVFMN LMWW+DFDGK+PAPAILKPRP+
Sbjct: 524 VSPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMWWQDFDGKIPAPAILKPRPI 583
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+R+SAWH++ E GFITPGDT VRIE+GELL+GTLCKK+LGT
Sbjct: 584 WTGKQVFNLIIPKQINLIRFSAWHSEEEKGFITPGDTMVRIEKGELLSGTLCKKSLGTGT 643
Query: 362 GSL 370
GSL
Sbjct: 644 GSL 646
[38][TOP]
>UniRef100_Q71ET7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Zea mays
RepID=Q71ET7_MAIZE
Length = 1009
Score = 228 bits (582), Expect = 1e-58
Identities = 104/123 (84%), Positives = 116/123 (94%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDT IEKDVFMN LMWW+DFDGK+PAP ILKPRP+
Sbjct: 443 VSPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMWWQDFDGKIPAPTILKPRPI 502
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+R+SAWH++ E GFITPGDT VRIE+GELL+GTLCKK+LGT +
Sbjct: 503 WTGKQVFNLIIPKQINLIRFSAWHSEEEKGFITPGDTMVRIEKGELLSGTLCKKSLGTGS 562
Query: 362 GSL 370
GSL
Sbjct: 563 GSL 565
[39][TOP]
>UniRef100_Q6T3S7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Zea mays
RepID=Q6T3S7_MAIZE
Length = 280
Score = 228 bits (582), Expect = 1e-58
Identities = 104/123 (84%), Positives = 116/123 (94%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDT IEKDVFMN LMWW+DFDGK+PAP ILKPRP+
Sbjct: 25 VSPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMWWQDFDGKIPAPTILKPRPI 84
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+R+SAWH++ E GFITPGDT VRIE+GELL+GTLCKK+LGT +
Sbjct: 85 WTGKQVFNLIIPKQINLIRFSAWHSEEEKGFITPGDTMVRIEKGELLSGTLCKKSLGTGS 144
Query: 362 GSL 370
GSL
Sbjct: 145 GSL 147
[40][TOP]
>UniRef100_Q71ET9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pinus nigra
RepID=Q71ET9_9CONI
Length = 1013
Score = 227 bits (579), Expect = 3e-58
Identities = 104/123 (84%), Positives = 117/123 (95%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGK+PAP I KPRP+
Sbjct: 447 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPTIYKPRPI 506
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+R SAWH+++E+G ITPGDT VRIE+GE+++GTLCKKTLGTS+
Sbjct: 507 WTGKQVFNLIIPKQINLIRTSAWHSESESGVITPGDTLVRIEKGEVISGTLCKKTLGTSS 566
Query: 362 GSL 370
GSL
Sbjct: 567 GSL 569
[41][TOP]
>UniRef100_Q71ET3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Psilotum nudum
RepID=Q71ET3_PSINU
Length = 1013
Score = 226 bits (576), Expect = 6e-58
Identities = 103/123 (83%), Positives = 116/123 (94%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPV+GIVQDTLLGCRK+TKRDTFIEKDVFMN LMWWEDFDGK+PAP ILKP+PL
Sbjct: 447 VSPQSNRPVIGIVQDTLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPAPTILKPKPL 506
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+F+LIIPKQINL+R+SAWH D+E G ITPGDT VRIE+GEL++GTLCKKTLGTS
Sbjct: 507 WTGKQLFSLIIPKQINLIRFSAWHLDSEVGEITPGDTVVRIEKGELISGTLCKKTLGTSG 566
Query: 362 GSL 370
GSL
Sbjct: 567 GSL 569
[42][TOP]
>UniRef100_C5Y387 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5Y387_SORBI
Length = 1874
Score = 225 bits (574), Expect = 1e-57
Identities = 102/123 (82%), Positives = 115/123 (93%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTLLGCRKITKRDT IEKDVFMN LMWWEDFDGK+PAPAILKPRP+
Sbjct: 525 VSPQSNKPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKIPAPAILKPRPI 584
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIP+QINL+R+ +WH+D E GF+TP DT VRIE+GELL+GTLCKKTLGT +
Sbjct: 585 WTGKQVFNLIIPRQINLIRFCSWHSDEEKGFVTPSDTVVRIEKGELLSGTLCKKTLGTGS 644
Query: 362 GSL 370
GSL
Sbjct: 645 GSL 647
[43][TOP]
>UniRef100_B7SNX4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pisum sativum
RepID=B7SNX4_PEA
Length = 1010
Score = 225 bits (573), Expect = 1e-57
Identities = 106/123 (86%), Positives = 111/123 (90%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQANRPVMGIVQD+LLGCRKITKRDTFI KDVFMN LMWWEDFDGKVPAP ILKP PL
Sbjct: 444 VSPQANRPVMGIVQDSLLGCRKITKRDTFIAKDVFMNILMWWEDFDGKVPAPTILKPEPL 503
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+RYS+WH + E G ITPGDT VRIE+GELL GTLCKKTLGT
Sbjct: 504 WTGKQVFNLIIPKQINLIRYSSWHNEAERGPITPGDTMVRIEKGELLTGTLCKKTLGTGT 563
Query: 362 GSL 370
GSL
Sbjct: 564 GSL 566
[44][TOP]
>UniRef100_Q2TUN5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ephedra viridis
RepID=Q2TUN5_EPHVI
Length = 1013
Score = 224 bits (571), Expect = 2e-57
Identities = 104/123 (84%), Positives = 115/123 (93%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGKVPAPAILKPRP+
Sbjct: 447 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPI 506
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+RYSAWH +++ G +T GDT VRIE+GE++ GTLCKKTLG S+
Sbjct: 507 WTGKQVFNLIIPKQINLVRYSAWHNESDRGHLTLGDTVVRIEKGEVITGTLCKKTLGASS 566
Query: 362 GSL 370
GSL
Sbjct: 567 GSL 569
[45][TOP]
>UniRef100_Q6T3S9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ephedra viridis
RepID=Q6T3S9_EPHVI
Length = 280
Score = 224 bits (570), Expect = 3e-57
Identities = 104/123 (84%), Positives = 115/123 (93%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN LMWWEDFDGKVPAPAILKPRP+
Sbjct: 25 VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPI 84
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+RYSAWH +++ G +T GDT VRIE+GE++ GTLCKKTLG S+
Sbjct: 85 WTGKQVFNLIIPKQINLVRYSAWHNESDRGHMTLGDTVVRIEKGEVITGTLCKKTLGASS 144
Query: 362 GSL 370
GSL
Sbjct: 145 GSL 147
[46][TOP]
>UniRef100_Q71ET8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Welwitschia
mirabilis RepID=Q71ET8_WELMI
Length = 1013
Score = 221 bits (563), Expect = 2e-56
Identities = 101/123 (82%), Positives = 115/123 (93%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRK+TK DTF EKDVFMN LMWWE+F+GK+P PAILKPRP+
Sbjct: 447 VSPQSNRPVMGIVQDTLLGCRKVTKGDTFTEKDVFMNILMWWEEFEGKIPNPAILKPRPI 506
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVFNLIIPKQINL+RYSAWH ++E GF TPGDT VRIE+GE+L+GTLCKKTLG+S+
Sbjct: 507 WTGKQVFNLIIPKQINLIRYSAWHNESEKGFPTPGDTVVRIEKGEVLSGTLCKKTLGSSS 566
Query: 362 GSL 370
GSL
Sbjct: 567 GSL 569
[47][TOP]
>UniRef100_O04144 DNA-directed RNA polymerase (Fragment) n=1 Tax=Spirogyra sp.
RepID=O04144_9VIRI
Length = 613
Score = 220 bits (560), Expect = 4e-56
Identities = 100/123 (81%), Positives = 113/123 (91%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRK+TKRDTFIEKDVFMN LMWWEDF+GK+P+P ILKPRPL
Sbjct: 35 VSPQSNRPVMGIVQDTLLGCRKVTKRDTFIEKDVFMNILMWWEDFEGKIPSPTILKPRPL 94
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVF+LIIP+ +NL RYSAWH D+E G +PGDTQVR+E+GELLAG LCKK+LGTS
Sbjct: 95 WTGKQVFSLIIPRAVNLERYSAWHPDSERGDFSPGDTQVRVEKGELLAGILCKKSLGTSG 154
Query: 362 GSL 370
GSL
Sbjct: 155 GSL 157
[48][TOP]
>UniRef100_Q6T3T0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Araucaria
heterophylla RepID=Q6T3T0_ARAHE
Length = 280
Score = 219 bits (558), Expect = 7e-56
Identities = 100/123 (81%), Positives = 113/123 (91%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPV+GIVQDTLLGCRK+TKRDTFIEKDVFMN LMWW+DFDGK+P PAILKPRP+
Sbjct: 25 VSPQSNRPVIGIVQDTLLGCRKVTKRDTFIEKDVFMNILMWWDDFDGKMPTPAILKPRPI 84
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+F+LIIPKQIN+ R +AWH D+E+ +TPGDT VRIERGELL GTLCKKTLGTS
Sbjct: 85 WTGKQIFSLIIPKQINMTRTAAWHNDSESTDVTPGDTSVRIERGELLTGTLCKKTLGTSG 144
Query: 362 GSL 370
GSL
Sbjct: 145 GSL 147
[49][TOP]
>UniRef100_A9U396 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9U396_PHYPA
Length = 1742
Score = 214 bits (544), Expect = 3e-54
Identities = 97/123 (78%), Positives = 111/123 (90%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPV+GIVQDTLLGCRK+TKRDTFIEKDVF N LMWWE+FDGK+P P ILKPRPL
Sbjct: 528 VSPQSNRPVIGIVQDTLLGCRKVTKRDTFIEKDVFYNILMWWEEFDGKIPIPTILKPRPL 587
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+F+LIIPKQINL+R + WH D E G ++PGDTQVRIE+GE++AGTLCKKTLGT
Sbjct: 588 WTGKQIFSLIIPKQINLMRQAFWHPDGEYGDLSPGDTQVRIEKGEVVAGTLCKKTLGTGQ 647
Query: 362 GSL 370
GSL
Sbjct: 648 GSL 650
[50][TOP]
>UniRef100_A9TK89 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TK89_PHYPA
Length = 1646
Score = 212 bits (540), Expect = 9e-54
Identities = 96/123 (78%), Positives = 110/123 (89%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPV+GIVQDTLLGCRK+TKRDTFIEKDVF N LMWWE+F GK+P P ILKPRPL
Sbjct: 528 VSPQSNRPVIGIVQDTLLGCRKVTKRDTFIEKDVFYNILMWWEEFAGKIPIPTILKPRPL 587
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+F LIIPKQINL+R + WH D+E G ++PGDTQVRIE+GE++AGTLCKKTLGT
Sbjct: 588 WTGKQIFTLIIPKQINLMRQAFWHPDSEVGDLSPGDTQVRIEKGEVVAGTLCKKTLGTGQ 647
Query: 362 GSL 370
GSL
Sbjct: 648 GSL 650
[51][TOP]
>UniRef100_A7R3J9 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
RepID=A7R3J9_VITVI
Length = 197
Score = 209 bits (531), Expect = 1e-52
Identities = 97/109 (88%), Positives = 104/109 (95%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKIT+RDTFIEKDVFMN LMWWEDFDGK+PAPAILKPRPL
Sbjct: 60 VSPQSNRPVMGIVQDTLLGCRKITRRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPL 119
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAG 328
W KQVFNLIIPKQINLLRYSAWH++ ETGF+TPGDTQVRIER ELL+G
Sbjct: 120 WIRKQVFNLIIPKQINLLRYSAWHSECETGFLTPGDTQVRIEREELLSG 168
[52][TOP]
>UniRef100_A5BJX4 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
RepID=A5BJX4_VITVI
Length = 305
Score = 209 bits (531), Expect = 1e-52
Identities = 97/109 (88%), Positives = 104/109 (95%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLGCRKIT+RDTFIEKDVFMN LMWWEDFDGK+PAPAILKPRPL
Sbjct: 124 VSPQSNRPVMGIVQDTLLGCRKITRRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPL 183
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAG 328
W KQVFNLIIPKQINLLRYSAWH++ ETGF+TPGDTQVRIER ELL+G
Sbjct: 184 WIRKQVFNLIIPKQINLLRYSAWHSECETGFLTPGDTQVRIEREELLSG 232
[53][TOP]
>UniRef100_A4S3M0 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus
CCE9901 RepID=A4S3M0_OSTLU
Length = 1646
Score = 180 bits (456), Expect = 5e-44
Identities = 87/123 (70%), Positives = 102/123 (82%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQAN+PVM IVQDTLLGCR ITKRDTFI KDVFMN +MW ED+DGKVP PAILKP+PL
Sbjct: 502 VSPQANKPVMAIVQDTLLGCRLITKRDTFITKDVFMNIIMWLEDWDGKVPKPAILKPQPL 561
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVF++++PK +NLLR SAW D++ + DT VRIE+GELL GTLCKKT+G+
Sbjct: 562 WTGKQVFSMMLPK-VNLLRTSAWAKDSDDMAFSVDDTGVRIEQGELLTGTLCKKTMGSGG 620
Query: 362 GSL 370
G L
Sbjct: 621 GGL 623
[54][TOP]
>UniRef100_Q010D7 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri
RepID=Q010D7_OSTTA
Length = 1673
Score = 179 bits (454), Expect = 8e-44
Identities = 86/123 (69%), Positives = 101/123 (82%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQAN+PVM IVQDTLLGCR ITKRDTFI KDVFMN +MW ED+DGK+P PAILKP+PL
Sbjct: 522 VSPQANKPVMAIVQDTLLGCRLITKRDTFIPKDVFMNIIMWLEDWDGKIPKPAILKPQPL 581
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVF++++PK +NLLR SAW D + + DT VRIE+GELL GTLCKKT+G+
Sbjct: 582 WTGKQVFSMMLPK-VNLLRTSAWARDADDVTFSVDDTGVRIEQGELLTGTLCKKTMGSGG 640
Query: 362 GSL 370
G L
Sbjct: 641 GGL 643
[55][TOP]
>UniRef100_Q30BD9 DNA-directed RNA polymerase n=1 Tax=Glaucocystis nostochinearum
RepID=Q30BD9_9EUKA
Length = 1852
Score = 168 bits (426), Expect = 1e-40
Identities = 80/123 (65%), Positives = 101/123 (82%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
+SPQ+NRPVMGIVQDTL+ +K+T RDTFIEKDV MN LM + FDG++P PAILKPRPL
Sbjct: 518 ISPQSNRPVMGIVQDTLMASQKMTIRDTFIEKDVVMNILMHLDSFDGRLPIPAILKPRPL 577
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+F + +P +NL+R+ + H D E I+PGDT+V IE+GELLAG +CK+TLGTS+
Sbjct: 578 WTGKQLFTMFLP-NVNLIRFCSQHPDNEVSDISPGDTKVIIEQGELLAGIVCKRTLGTSS 636
Query: 362 GSL 370
GSL
Sbjct: 637 GSL 639
[56][TOP]
>UniRef100_Q6JTW2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Peripatus sp. Per3
RepID=Q6JTW2_9BILA
Length = 515
Score = 167 bits (423), Expect = 3e-40
Identities = 78/127 (61%), Positives = 100/127 (78%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQ+NRPVMGIVQDTL RK+TKRD F+EK+ MN LMW +DGK+P PAILKP+PL
Sbjct: 56 ITPQSNRPVMGIVQDTLTAVRKMTKRDVFLEKEEMMNLLMWLPSWDGKIPQPAILKPKPL 115
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+L+IP +NL+R + H D E +I+PGDT+V IE G+L++G LCKKTL
Sbjct: 116 WTGKQIFSLVIPGNVNLIRTHSTHPDNEDDGPYKWISPGDTKVLIEHGDLISGILCKKTL 175
Query: 350 GTSNGSL 370
GTS+GSL
Sbjct: 176 GTSSGSL 182
[57][TOP]
>UniRef100_P35084 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Dictyostelium
discoideum RepID=RPB1_DICDI
Length = 1727
Score = 166 bits (421), Expect = 6e-40
Identities = 82/123 (66%), Positives = 99/123 (80%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLG R TKRD F+EKD+ MN LMW +DGKVP PAILKP+ L
Sbjct: 517 VSPQSNRPVMGIVQDTLLGSRLFTKRDCFMEKDLVMNILMWLPSWDGKVPPPAILKPKQL 576
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+F+LIIP INL+R+++ H D E + GDT+V IERGELLAG LCK++LG +N
Sbjct: 577 WTGKQLFSLIIP-DINLIRFTSTHNDKEPNECSAGDTRVIIERGELLAGILCKRSLGAAN 635
Query: 362 GSL 370
GS+
Sbjct: 636 GSI 638
[58][TOP]
>UniRef100_Q2PYR1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Spiromyces aspiralis
RepID=Q2PYR1_9FUNG
Length = 1022
Score = 164 bits (416), Expect = 2e-39
Identities = 78/123 (63%), Positives = 95/123 (77%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
+SPQAN PVMGIVQDTL RK T+RD F+ KD+ MN LM D+DG VP PAI+KP+PL
Sbjct: 454 ISPQANSPVMGIVQDTLCAIRKFTRRDNFMAKDLVMNILMHIPDWDGTVPTPAIIKPKPL 513
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+++L IPK IN LR+ + H D ET F++PGDT+V IE GELLAG +CKKT+ S
Sbjct: 514 WTGKQIYSLAIPKGINCLRFHSTHPDNETTFVSPGDTRVIIEDGELLAGIICKKTVDASE 573
Query: 362 GSL 370
GSL
Sbjct: 574 GSL 576
[59][TOP]
>UniRef100_Q2PYS1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Basidiobolus ranarum
RepID=Q2PYS1_9FUNG
Length = 1015
Score = 164 bits (414), Expect = 4e-39
Identities = 74/121 (61%), Positives = 94/121 (77%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
+SPQ+N+PVMGIVQDTL G RK TKRD F++K + MN LMW D+DG +P PAILKP+PL
Sbjct: 447 ISPQSNKPVMGIVQDTLCGIRKFTKRDCFVDKALVMNILMWVADWDGVIPTPAILKPQPL 506
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +I+PK IN + Y + H D E I+PGDT+V +E GELL+G +CKKT+G SN
Sbjct: 507 WTGKQLVTMIVPKNINCITYHSAHPDDEKSDISPGDTKVVVENGELLSGIVCKKTVGASN 566
Query: 362 G 364
G
Sbjct: 567 G 567
[60][TOP]
>UniRef100_A1YIB6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Basidiobolus ranarum
RepID=A1YIB6_9FUNG
Length = 1018
Score = 164 bits (414), Expect = 4e-39
Identities = 73/121 (60%), Positives = 95/121 (78%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
+SPQ+N+PVMGIVQDTL G RK TKRD+F++K + MN LMW D+DG +P PAILKP+PL
Sbjct: 445 ISPQSNKPVMGIVQDTLCGIRKFTKRDSFVDKALVMNILMWVADWDGVIPTPAILKPQPL 504
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +I+PK IN + Y + H D E I+PGDT+V +E GEL++G +CKKT+G SN
Sbjct: 505 WTGKQLVTMIVPKNINCITYHSAHPDDEKSDISPGDTKVVVENGELISGIVCKKTVGASN 564
Query: 362 G 364
G
Sbjct: 565 G 565
[61][TOP]
>UniRef100_O61119 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dictyostelium
discoideum RepID=O61119_DICDI
Length = 757
Score = 162 bits (411), Expect = 8e-39
Identities = 80/123 (65%), Positives = 98/123 (79%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+NRPVMGIVQDTLLG R TKRD F+EKD+ MN LMW +DGKVP PAILKP+ L
Sbjct: 443 VSPQSNRPVMGIVQDTLLGSRLFTKRDCFMEKDLVMNILMWLPSWDGKVPPPAILKPKQL 502
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+F+LIIP INL+R+++ H D + + GDT+V IER ELLAG LCK++LG +N
Sbjct: 503 WTGKQLFSLIIP-DINLIRFTSTHNDKKPNECSAGDTRVIIERSELLAGILCKRSLGAAN 561
Query: 362 GSL 370
GS+
Sbjct: 562 GSI 564
[62][TOP]
>UniRef100_Q76II8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cokeromyces
recurvatus RepID=Q76II8_9FUNG
Length = 336
Score = 162 bits (411), Expect = 8e-39
Identities = 74/123 (60%), Positives = 95/123 (77%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL G RK T RD F+ KD+ MN +MW +DG +P PAILKP+P+
Sbjct: 28 VSPQSNKPVMGIVQDTLCGIRKFTLRDCFLTKDLVMNIVMWVPSWDGYIPTPAILKPKPM 87
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +++IPK IN L + + H D ET I+PGDT+V IE GEL+ G +CKKT+GTS+
Sbjct: 88 WTGKQILSMVIPKGINCLTFHSTHPDGETTLISPGDTRVIIENGELICGIVCKKTVGTSS 147
Query: 362 GSL 370
G L
Sbjct: 148 GGL 150
[63][TOP]
>UniRef100_C1MI48 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MI48_9CHLO
Length = 1694
Score = 162 bits (409), Expect = 1e-38
Identities = 79/123 (64%), Positives = 94/123 (76%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQAN+PVM IVQDTLL R +TKRDTFI+KDVFMN LMW E++DGKVP PAILKP PL
Sbjct: 506 VSPQANKPVMAIVQDTLLASRLMTKRDTFIKKDVFMNILMWLENWDGKVPKPAILKPEPL 565
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVF + +P ++L + SAW D + + DT VRIE+GEL+ G LCKKTLG+
Sbjct: 566 WTGKQVFTMFLP-DVSLTKQSAWAKDNDPHDFSVEDTGVRIEKGELITGILCKKTLGSGG 624
Query: 362 GSL 370
G L
Sbjct: 625 GGL 627
[64][TOP]
>UniRef100_Q2PYQ3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phycomyces
blakesleeanus RepID=Q2PYQ3_PHYBL
Length = 564
Score = 162 bits (409), Expect = 1e-38
Identities = 74/123 (60%), Positives = 95/123 (77%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL G RK T RD FI KDV MN +MW D+DG +P PAILKP+P+
Sbjct: 277 VSPQSNKPVMGIVQDTLCGIRKFTLRDCFITKDVVMNIVMWVPDWDGYIPPPAILKPKPM 336
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +++IP+ IN + + H D E +I+PGDT+V IE GELL G +CKKT+GT++
Sbjct: 337 WTGKQIVSMVIPRGINCQTFHSTHPDKENTYISPGDTRVVIENGELLCGIVCKKTVGTTS 396
Query: 362 GSL 370
G L
Sbjct: 397 GGL 399
[65][TOP]
>UniRef100_Q873Q1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Basidiobolus ranarum
RepID=Q873Q1_9FUNG
Length = 335
Score = 161 bits (407), Expect = 2e-38
Identities = 75/121 (61%), Positives = 93/121 (76%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSP +N+PVMGIVQDTL G RK TKRD+F+EK + MN L W D+DG VP PAILKP+PL
Sbjct: 28 VSPHSNKPVMGIVQDTLCGVRKFTKRDSFVEKALVMNLLTWVPDWDGIVPKPAILKPKPL 87
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +LIIPK IN + Y + H D E I+PGDT+V +E GEL+ G +CK+T+G SN
Sbjct: 88 WTGKQLISLIIPKGINCITYHSAHPDDERSDISPGDTKVIVENGELICGIVCKRTIGASN 147
Query: 362 G 364
G
Sbjct: 148 G 148
[66][TOP]
>UniRef100_C1EA31 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1EA31_9CHLO
Length = 1720
Score = 160 bits (406), Expect = 3e-38
Identities = 76/123 (61%), Positives = 93/123 (75%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQAN+PVM IVQDTLL CR ITKRDTFI KDVFMN LMW ++DGKVP PAI+KP PL
Sbjct: 503 VSPQANKPVMAIVQDTLLACRLITKRDTFITKDVFMNILMWHTNWDGKVPKPAIIKPEPL 562
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVF++ P +N++R SAW D + + D VR+ERGEL+ G +CKK++G+
Sbjct: 563 WTGKQVFSMFTP-DVNVIRTSAWARDADDMDFSVDDVGVRVERGELITGIMCKKSMGSGG 621
Query: 362 GSL 370
G L
Sbjct: 622 GGL 624
[67][TOP]
>UniRef100_O02471 DNA-directed RNA polymerase (Fragment) n=1 Tax=Scutigera
coleoptrata RepID=O02471_SCUCO
Length = 582
Score = 160 bits (405), Expect = 4e-38
Identities = 77/127 (60%), Positives = 99/127 (77%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQ+NRPVMGIVQDTL RK+TKRD F+EKD MN LM+ +DGK+P PAILKP+PL
Sbjct: 25 ITPQSNRPVMGIVQDTLTAVRKMTKRDVFLEKDQMMNLLMFLPIWDGKMPMPAILKPKPL 84
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTET----GFITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N++R + H D E +I+PGDT+V +E G+L++G LCKKTL
Sbjct: 85 WTGKQIFSLIIPGNVNMIRTHSTHPDDEDEGPYKWISPGDTKVLVEHGDLISGILCKKTL 144
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 145 GTSAGSL 151
[68][TOP]
>UniRef100_UPI000051A77E PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit isoform 2 n=1 Tax=Apis mellifera
RepID=UPI000051A77E
Length = 1422
Score = 160 bits (404), Expect = 5e-38
Identities = 77/127 (60%), Positives = 97/127 (76%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD FIEK+ MN LM+ +DGK+P P ILKP+PL
Sbjct: 518 ITPQANKPVMGIVQDTLTAVRKMTKRDVFIEKEQMMNILMFLPSWDGKMPQPCILKPKPL 577
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N++R + H D E +I+PGDT+V +E GEL+ G LCKKTL
Sbjct: 578 WTGKQIFSLIIPGNVNMIRTHSTHPDEEDDGPYKWISPGDTKVMVEHGELVMGILCKKTL 637
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 638 GTSAGSL 644
[69][TOP]
>UniRef100_Q7Q3C6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7Q3C6_ANOGA
Length = 1878
Score = 160 bits (404), Expect = 5e-38
Identities = 77/127 (60%), Positives = 97/127 (76%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD FIEK+ MN LM+ +DGK+P PAILKP+PL
Sbjct: 516 ITPQANKPVMGIVQDTLTAVRKMTKRDVFIEKEQMMNLLMFLPTWDGKMPQPAILKPKPL 575
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F LIIP +N++R + H D E +I+PGDT+V +E G+L+ G LCKKTL
Sbjct: 576 WTGKQIFTLIIPGNVNMIRTHSTHPDEEDDGPYKWISPGDTKVMVEHGDLIMGILCKKTL 635
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 636 GTSAGSL 642
[70][TOP]
>UniRef100_Q9NJJ5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Speleonectes
tulumensis RepID=Q9NJJ5_9CRUS
Length = 636
Score = 159 bits (403), Expect = 7e-38
Identities = 77/127 (60%), Positives = 98/127 (77%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD F+EKD MN LM+ +DGK+P PAILKP+PL
Sbjct: 177 ITPQANKPVMGIVQDTLCAVRKMTKRDVFLEKDQMMNLLMFLPIWDGKMPQPAILKPKPL 236
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N++R + H D E +I+PGDT+V +E GEL+ G +CKKTL
Sbjct: 237 WTGKQLFSLIIPGNVNMIRTHSTHPDEEDDGPYKWISPGDTKVMVEHGELVMGIMCKKTL 296
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 297 GTSAGSL 303
[71][TOP]
>UniRef100_Q76IJ3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coemansia mojavensis
RepID=Q76IJ3_9FUNG
Length = 335
Score = 159 bits (403), Expect = 7e-38
Identities = 73/123 (59%), Positives = 95/123 (77%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL RK TKRDTF++ D+ M +M D+DG +P P ILKP+PL
Sbjct: 28 VSPQSNKPVMGIVQDTLCAIRKFTKRDTFMDIDMVMLLMMHISDWDGNLPTPCILKPKPL 87
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ++++IIPK IN LR+ A H D ET +I+PGDT+V + GEL+ G +CKKT+G +N
Sbjct: 88 WTGKQIYSMIIPKGINCLRFHATHPDNETTWISPGDTRVYVANGELICGIVCKKTVGATN 147
Query: 362 GSL 370
G L
Sbjct: 148 GGL 150
[72][TOP]
>UniRef100_UPI0000D5670C PREDICTED: similar to GA13798-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D5670C
Length = 2007
Score = 159 bits (402), Expect = 9e-38
Identities = 77/127 (60%), Positives = 98/127 (77%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD FIEK+ MN LM+ +DGK+P PAILKP+PL
Sbjct: 522 ITPQANKPVMGIVQDTLTAIRKMTKRDVFIEKEQMMNLLMFLPIWDGKMPRPAILKPKPL 581
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTE----TGFITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N++R + H D E +I+PGDT+V +E GEL+ G LCK+TL
Sbjct: 582 WTGKQIFSLIIPGNVNMIRTHSTHPDDEDDGPNKWISPGDTKVMVEHGELVMGILCKRTL 641
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 642 GTSAGSL 648
[73][TOP]
>UniRef100_Q9BNQ2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Abacion magnum
RepID=Q9BNQ2_9MYRI
Length = 624
Score = 159 bits (402), Expect = 9e-38
Identities = 79/127 (62%), Positives = 97/127 (76%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQ+NRPVMGIVQDTL RK+TKRD FIEK+ MN LM+ +DGKVP PAILKP+PL
Sbjct: 165 ITPQSNRPVMGIVQDTLTAVRKMTKRDVFIEKEHMMNLLMFLPIWDGKVPQPAILKPKPL 224
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTET----GFITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N +R + H D E +I+PGDT+V +E GEL+ G LCKKTL
Sbjct: 225 WTGKQLFSLIIPGNVNCIRTHSTHPDDEDESPYKWISPGDTKVLVEHGELICGILCKKTL 284
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 285 GTSAGSL 291
[74][TOP]
>UniRef100_Q2PYQ7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glomus intraradices
RepID=Q2PYQ7_GLOIN
Length = 585
Score = 159 bits (402), Expect = 9e-38
Identities = 80/125 (64%), Positives = 96/125 (76%), Gaps = 2/125 (1%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL G RK TKRDTF+ KD+ MN LMW +D+DGK+P P ILKP PL
Sbjct: 277 VSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKDWDGKIPTPCILKPIPL 336
Query: 182 WTGKQVFNLIIPKQINL--LRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGT 355
WTGKQ+ ++IIPK IN LR+S H D E I+PGDT+V IE GELL G +CKKT+GT
Sbjct: 337 WTGKQILSMIIPKGINSDNLRHST-HPDGEFTDISPGDTKVLIEDGELLCGIICKKTVGT 395
Query: 356 SNGSL 370
+ L
Sbjct: 396 AQQGL 400
[75][TOP]
>UniRef100_Q2PYP9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neocallimastix sp.
GE13 RepID=Q2PYP9_9FUNG
Length = 813
Score = 159 bits (402), Expect = 9e-38
Identities = 78/123 (63%), Positives = 93/123 (75%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQAN+PVMGIVQDTL G RK TKRD F+ +D MN +MW D+DG VP P ILKP PL
Sbjct: 245 VSPQANKPVMGIVQDTLCGIRKFTKRDCFLTRDFVMNIIMWVPDWDGVVPPPCILKPIPL 304
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +LIIPK IN++ Y + H D E I+PGDT+V IE GELLAG LCKKT+G+S
Sbjct: 305 WTGKQIMSLIIPK-INIVGYHSTHPDNEDTDISPGDTKVLIENGELLAGILCKKTVGSSQ 363
Query: 362 GSL 370
+
Sbjct: 364 NGI 366
[76][TOP]
>UniRef100_A6GVG2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glomus proliferum
RepID=A6GVG2_9GLOM
Length = 478
Score = 159 bits (402), Expect = 9e-38
Identities = 80/125 (64%), Positives = 96/125 (76%), Gaps = 2/125 (1%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL G RK TKRDTF+ KD+ MN LMW +D+DGK+P P ILKP PL
Sbjct: 259 VSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKDWDGKIPTPCILKPIPL 318
Query: 182 WTGKQVFNLIIPKQINL--LRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGT 355
WTGKQ+ ++IIPK IN LR+S H D E I+PGDT+V IE GELL G +CKKT+GT
Sbjct: 319 WTGKQILSMIIPKGINSDNLRHST-HPDGEFTDISPGDTKVLIEDGELLCGIICKKTVGT 377
Query: 356 SNGSL 370
+ L
Sbjct: 378 AQQGL 382
[77][TOP]
>UniRef100_A6GVG1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glomus proliferum
RepID=A6GVG1_9GLOM
Length = 478
Score = 159 bits (402), Expect = 9e-38
Identities = 80/125 (64%), Positives = 96/125 (76%), Gaps = 2/125 (1%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL G RK TKRDTF+ KD+ MN LMW +D+DGK+P P ILKP PL
Sbjct: 259 VSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKDWDGKIPTPCILKPIPL 318
Query: 182 WTGKQVFNLIIPKQINL--LRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGT 355
WTGKQ+ ++IIPK IN LR+S H D E I+PGDT+V IE GELL G +CKKT+GT
Sbjct: 319 WTGKQILSMIIPKGINSDNLRHST-HPDGEFTDISPGDTKVLIEDGELLCGIICKKTVGT 377
Query: 356 SNGSL 370
+ L
Sbjct: 378 AQQGL 382
[78][TOP]
>UniRef100_A6GVG0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glomus proliferum
RepID=A6GVG0_9GLOM
Length = 477
Score = 159 bits (402), Expect = 9e-38
Identities = 80/125 (64%), Positives = 96/125 (76%), Gaps = 2/125 (1%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL G RK TKRDTF+ KD+ MN LMW +D+DGK+P P ILKP PL
Sbjct: 259 VSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKDWDGKIPTPCILKPIPL 318
Query: 182 WTGKQVFNLIIPKQINL--LRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGT 355
WTGKQ+ ++IIPK IN LR+S H D E I+PGDT+V IE GELL G +CKKT+GT
Sbjct: 319 WTGKQILSMIIPKGINSDNLRHST-HPDGEFTDISPGDTKVLIEDGELLCGIICKKTVGT 377
Query: 356 SNGSL 370
+ L
Sbjct: 378 AQQGL 382
[79][TOP]
>UniRef100_A6GVF9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glomus proliferum
RepID=A6GVF9_9GLOM
Length = 498
Score = 159 bits (402), Expect = 9e-38
Identities = 80/125 (64%), Positives = 96/125 (76%), Gaps = 2/125 (1%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL G RK TKRDTF+ KD+ MN LMW +D+DGK+P P ILKP PL
Sbjct: 268 VSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKDWDGKIPTPCILKPIPL 327
Query: 182 WTGKQVFNLIIPKQINL--LRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGT 355
WTGKQ+ ++IIPK IN LR+S H D E I+PGDT+V IE GELL G +CKKT+GT
Sbjct: 328 WTGKQILSMIIPKGINSDNLRHST-HPDGEFTDISPGDTKVLIEDGELLCGIICKKTVGT 386
Query: 356 SNGSL 370
+ L
Sbjct: 387 AQQGL 391
[80][TOP]
>UniRef100_A1YIC6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neocallimastix
frontalis RepID=A1YIC6_NEOFR
Length = 1004
Score = 159 bits (402), Expect = 9e-38
Identities = 78/123 (63%), Positives = 93/123 (75%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQAN+PVMGIVQDTL G RK TKRD F+ +D MN +MW D+DG VP P ILKP PL
Sbjct: 431 VSPQANKPVMGIVQDTLCGIRKFTKRDCFLTRDFVMNIIMWVPDWDGVVPPPCILKPIPL 490
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +LIIPK IN++ Y + H D E I+PGDT+V IE GELLAG LCKKT+G+S
Sbjct: 491 WTGKQIMSLIIPK-INIVGYHSTHPDNEDTDISPGDTKVLIENGELLAGILCKKTVGSSQ 549
Query: 362 GSL 370
+
Sbjct: 550 NGI 552
[81][TOP]
>UniRef100_B0XAQ9 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
RepID=B0XAQ9_CULQU
Length = 1874
Score = 159 bits (401), Expect = 1e-37
Identities = 76/127 (59%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD F+EK+ MN LM+ +DGK+P P ILKP+PL
Sbjct: 516 ITPQANKPVMGIVQDTLTAVRKMTKRDVFLEKEQMMNLLMFLPTWDGKMPQPCILKPKPL 575
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F LIIP +N++R + H D E +I+PGDT+V +E GEL+ G LCKKTL
Sbjct: 576 WTGKQIFTLIIPGNVNMIRTHSTHPDEEDDGPYKWISPGDTKVMVEHGELIMGILCKKTL 635
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 636 GTSAGSL 642
[82][TOP]
>UniRef100_Q76IJ0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dimargaris
bacillispora RepID=Q76IJ0_9FUNG
Length = 335
Score = 159 bits (401), Expect = 1e-37
Identities = 72/123 (58%), Positives = 94/123 (76%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQAN+PVMGIVQDTL R+ TKRDTF+ KD+ MN ++W ++DG++P P ILKP+PL
Sbjct: 28 VSPQANKPVMGIVQDTLCAVRRFTKRDTFLTKDMVMNLMLWLPNWDGQIPQPCILKPKPL 87
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+F++IIP IN +RY + H D E I+PGDT+V IE G L+AG +CKKT+G +
Sbjct: 88 WTGKQIFSMIIPSGINCIRYHSLHPDDEKTDISPGDTKVIIEDGTLVAGIICKKTVGAAE 147
Query: 362 GSL 370
L
Sbjct: 148 SGL 150
[83][TOP]
>UniRef100_Q2PYS2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dimargaris
bacillispora RepID=Q2PYS2_9FUNG
Length = 753
Score = 159 bits (401), Expect = 1e-37
Identities = 72/123 (58%), Positives = 94/123 (76%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQAN+PVMGIVQDTL R+ TKRDTF+ KD+ MN ++W ++DG++P P ILKP+PL
Sbjct: 446 VSPQANKPVMGIVQDTLCAVRRFTKRDTFLTKDMVMNLMLWLPNWDGQIPQPCILKPKPL 505
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+F++IIP IN +RY + H D E I+PGDT+V IE G L+AG +CKKT+G +
Sbjct: 506 WTGKQIFSMIIPSGINCIRYHSLHPDDEKTDISPGDTKVIIEDGTLVAGIICKKTVGAAE 565
Query: 362 GSL 370
L
Sbjct: 566 SGL 568
[84][TOP]
>UniRef100_B4YT36 DNA-directed RNA polymerase (Fragment) n=1 Tax=Chauliognathus
opacus RepID=B4YT36_9COLE
Length = 629
Score = 158 bits (400), Expect = 2e-37
Identities = 77/127 (60%), Positives = 98/127 (77%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD FI+K+ MN LM+ +DGK+P PAILKP+PL
Sbjct: 55 ITPQANKPVMGIVQDTLTAVRKMTKRDVFIDKEQMMNLLMFLPIWDGKMPRPAILKPKPL 114
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N++R + H D E +I+PGDT+V +E GEL+ G LCKKTL
Sbjct: 115 WTGKQLFSLIIPGNVNMIRTHSTHPDEEDDGPYKWISPGDTKVMVEHGELVMGILCKKTL 174
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 175 GTSAGSL 181
[85][TOP]
>UniRef100_A6GVF7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glomus intraradices
RepID=A6GVF7_GLOIN
Length = 487
Score = 158 bits (400), Expect = 2e-37
Identities = 79/125 (63%), Positives = 96/125 (76%), Gaps = 2/125 (1%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL G RK TKRDTF+ KD+ MN +MW +D+DGK+P P ILKP PL
Sbjct: 268 VSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNIIMWVKDWDGKIPTPCILKPIPL 327
Query: 182 WTGKQVFNLIIPKQINL--LRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGT 355
WTGKQ+ ++IIPK IN LR+S H D E I+PGDT+V IE GELL G +CKKT+GT
Sbjct: 328 WTGKQILSMIIPKGINSDNLRHST-HPDGEFTDISPGDTKVLIEDGELLCGIICKKTVGT 386
Query: 356 SNGSL 370
+ L
Sbjct: 387 AQQGL 391
[86][TOP]
>UniRef100_UPI000179348F PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179348F
Length = 1862
Score = 158 bits (399), Expect = 2e-37
Identities = 77/127 (60%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD FIEK+ MN LM +DGK+P P ILKP+P+
Sbjct: 519 ITPQANKPVMGIVQDTLTAIRKMTKRDVFIEKEQMMNLLMHLPIWDGKMPTPCILKPKPM 578
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQVF+LIIP +N++R + H D E +I+PGDT+V +E GEL+ G LCKKTL
Sbjct: 579 WTGKQVFSLIIPGNVNMIRTHSTHPDEEDNGPYKWISPGDTKVMVEHGELVMGILCKKTL 638
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 639 GTSAGSL 645
[87][TOP]
>UniRef100_UPI00005A0B1F PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide A isoform 10 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1F
Length = 1840
Score = 158 bits (399), Expect = 2e-37
Identities = 81/127 (63%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ VFMN LM+ +DGKVP PAILKPRPL
Sbjct: 523 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLER-VFMNLLMFLSTWDGKVPQPAILKPRPL 581
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 582 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 641
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 642 GTSAGSL 648
[88][TOP]
>UniRef100_UPI00005A0B1E PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide A isoform 9 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1E
Length = 1851
Score = 158 bits (399), Expect = 2e-37
Identities = 81/127 (63%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ VFMN LM+ +DGKVP PAILKPRPL
Sbjct: 523 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLER-VFMNLLMFLSTWDGKVPQPAILKPRPL 581
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 582 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 641
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 642 GTSAGSL 648
[89][TOP]
>UniRef100_Q9NJK2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Polyxenus
fasciculatus RepID=Q9NJK2_9MYRI
Length = 751
Score = 158 bits (399), Expect = 2e-37
Identities = 76/127 (59%), Positives = 98/127 (77%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQ+NRPVMGIVQDTL RK+TKRD F++KD MN LM+ +DGK+P PAILKP+P+
Sbjct: 177 ITPQSNRPVMGIVQDTLTAVRKMTKRDVFLDKDQMMNILMFLPIWDGKMPQPAILKPKPV 236
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQVF+LIIP +N++R + H D E +I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 237 WTGKQVFSLIIPGNVNMIRTHSTHPDDEDDGPYKWISPGDTKVLVEHGELMCGILCKKSL 296
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 297 GTSAGSL 303
[90][TOP]
>UniRef100_Q9BNP9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Bothropolys
multidentatus RepID=Q9BNP9_9MYRI
Length = 624
Score = 158 bits (399), Expect = 2e-37
Identities = 78/127 (61%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQ+NRPVMGIVQDTL RK+TKRD F+EKD MN LM+ +DGK+P PAILKP+PL
Sbjct: 165 ITPQSNRPVMGIVQDTLTAVRKMTKRDVFLEKDQMMNLLMFLPIWDGKMPMPAILKPKPL 224
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N +R H D E +I+PGDT+V +E GEL+ G LCKKTL
Sbjct: 225 WTGKQLFSLIIPGNVNCIRAHYSHPDDEDDSPYKWISPGDTKVLVEHGELICGILCKKTL 284
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 285 GTSAGSL 291
[91][TOP]
>UniRef100_O02450 DNA-directed RNA polymerase (Fragment) n=1 Tax=Limulus polyphemus
RepID=O02450_LIMPO
Length = 778
Score = 158 bits (399), Expect = 2e-37
Identities = 76/127 (59%), Positives = 99/127 (77%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQ+N+PVMGIVQDTL RK+T+RD F+EKD MN LM+ +DGK+P PAILKP+PL
Sbjct: 56 ITPQSNKPVMGIVQDTLTAVRKMTRRDVFLEKDQMMNLLMYLPIWDGKMPMPAILKPKPL 115
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP INL+R + H D E +I+PGDT+V IE GEL++G +CKKT+
Sbjct: 116 WTGKQLFSLIIPPNINLIRTHSTHPDEEDDGPYKWISPGDTKVLIEHGELISGIVCKKTV 175
Query: 350 GTSNGSL 370
G S+GSL
Sbjct: 176 GASSGSL 182
[92][TOP]
>UniRef100_C0JPA2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Trichoplax adhaerens
RepID=C0JPA2_TRIAD
Length = 625
Score = 158 bits (399), Expect = 2e-37
Identities = 75/127 (59%), Positives = 99/127 (77%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+N+PVMGIVQD+L RK T RD F+EK+V MN LMW +++GK+P PAIL+P+ L
Sbjct: 53 VTPQSNKPVMGIVQDSLTAVRKFTMRDVFLEKEVVMNLLMWLPNWNGKMPQPAILRPKEL 112
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTET----GFITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +NL+R + H D E FI+PGDT+V IE GE+++G LCK+TL
Sbjct: 113 WTGKQIFSLIIPGNVNLIRTHSTHPDDEDKGPYKFISPGDTKVLIEHGEVISGILCKRTL 172
Query: 350 GTSNGSL 370
GTS+GSL
Sbjct: 173 GTSSGSL 179
[93][TOP]
>UniRef100_B3RM26 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
RepID=B3RM26_TRIAD
Length = 1784
Score = 158 bits (399), Expect = 2e-37
Identities = 75/127 (59%), Positives = 99/127 (77%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+N+PVMGIVQD+L RK T RD F+EK+V MN LMW +++GK+P PAIL+P+ L
Sbjct: 514 VTPQSNKPVMGIVQDSLTAVRKFTMRDVFLEKEVVMNLLMWLPNWNGKMPQPAILRPKEL 573
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTET----GFITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +NL+R + H D E FI+PGDT+V IE GE+++G LCK+TL
Sbjct: 574 WTGKQIFSLIIPGNVNLIRTHSTHPDDEDKGPYKFISPGDTKVLIEHGEVISGILCKRTL 633
Query: 350 GTSNGSL 370
GTS+GSL
Sbjct: 634 GTSSGSL 640
[94][TOP]
>UniRef100_Q873P9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mucor mucedo
RepID=Q873P9_MUCMU
Length = 336
Score = 158 bits (399), Expect = 2e-37
Identities = 72/123 (58%), Positives = 93/123 (75%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL G RK T RD F+ KD+ MN +MW +DG +P PAILKP+P+
Sbjct: 28 VSPQSNKPVMGIVQDTLCGIRKFTLRDCFLTKDLVMNIVMWVPSWDGYIPPPAILKPKPM 87
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +++IPK IN Y + H D E+ I+PGDT+V IE GEL+ G +CKKT+GT+
Sbjct: 88 WTGKQIVSMVIPKGINCQTYHSTHPDGESTLISPGDTRVIIENGELICGIVCKKTVGTAG 147
Query: 362 GSL 370
G L
Sbjct: 148 GGL 150
[95][TOP]
>UniRef100_A1YIC1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Blastocladiella
emersonii RepID=A1YIC1_BLAEM
Length = 1005
Score = 158 bits (399), Expect = 2e-37
Identities = 77/123 (62%), Positives = 95/123 (77%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL G K T+RDTF++K + MN LMW +DG VP PAILKP+PL
Sbjct: 433 VSPQSNKPVMGIVQDTLCGITKFTRRDTFMDKAMVMNLLMWVPGWDGNVPVPAILKPKPL 492
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +LIIPK +N + + H D ET I+PGDT+V +E GELLAG +CKKT+GTS
Sbjct: 493 WTGKQILSLIIPK-VNCITLHSTHPDGETTDISPGDTRVIVEDGELLAGIVCKKTVGTSA 551
Query: 362 GSL 370
G L
Sbjct: 552 GGL 554
[96][TOP]
>UniRef100_UPI000186501C hypothetical protein BRAFLDRAFT_115025 n=1 Tax=Branchiostoma
floridae RepID=UPI000186501C
Length = 1956
Score = 157 bits (398), Expect = 3e-37
Identities = 75/127 (59%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQ+NRPVMGIVQDTL RK TKRD FI+++ MN LMW +DGK+P PAILKP+PL
Sbjct: 522 ITPQSNRPVMGIVQDTLTAVRKFTKRDVFIDRNDMMNLLMWLPTWDGKMPQPAILKPKPL 581
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N +R + H D E +I+PGDT+V +E GEL++G LCKK+L
Sbjct: 582 WTGKQLFSLIIPGHVNCIRMHSTHPDEEDSGPYKWISPGDTKVIVENGELISGILCKKSL 641
Query: 350 GTSNGSL 370
G S GSL
Sbjct: 642 GPSGGSL 648
[97][TOP]
>UniRef100_Q9NJJ7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Scolopendra
polymorpha RepID=Q9NJJ7_SCOPO
Length = 734
Score = 157 bits (398), Expect = 3e-37
Identities = 77/127 (60%), Positives = 98/127 (77%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQ+NRPVMGIVQDTL RK+TKRD F+EKD MN LM+ +DGK+P PAILKP+PL
Sbjct: 177 ITPQSNRPVMGIVQDTLTAVRKMTKRDVFLEKDQMMNLLMFLPIWDGKMPMPAILKPKPL 236
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N++R H D E +I+PGDT+V +E G+L++G LCKKTL
Sbjct: 237 WTGKQLFSLIIPGAVNVIRTHYTHPDDEDDSPYKWISPGDTKVLVEHGKLISGILCKKTL 296
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 297 GTSAGSL 303
[98][TOP]
>UniRef100_C3ZES3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
RepID=C3ZES3_BRAFL
Length = 1934
Score = 157 bits (398), Expect = 3e-37
Identities = 75/127 (59%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQ+NRPVMGIVQDTL RK TKRD FI+++ MN LMW +DGK+P PAILKP+PL
Sbjct: 522 ITPQSNRPVMGIVQDTLTAVRKFTKRDVFIDRNDMMNLLMWLPTWDGKMPQPAILKPKPL 581
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N +R + H D E +I+PGDT+V +E GEL++G LCKK+L
Sbjct: 582 WTGKQLFSLIIPGHVNCIRMHSTHPDEEDSGPYKWISPGDTKVIVENGELISGILCKKSL 641
Query: 350 GTSNGSL 370
G S GSL
Sbjct: 642 GPSGGSL 648
[99][TOP]
>UniRef100_B3MQ29 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3MQ29_DROAN
Length = 1889
Score = 157 bits (398), Expect = 3e-37
Identities = 76/127 (59%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD FI ++ MN LM+ +DGK+P P ILKPRPL
Sbjct: 518 ITPQANKPVMGIVQDTLTAVRKMTKRDVFITREQMMNLLMFLPTWDGKMPQPCILKPRPL 577
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N++R + H D E +I+PGDT+V +E GEL+ G LCKKTL
Sbjct: 578 WTGKQIFSLIIPGNVNMIRTHSTHPDEEDDGPYKWISPGDTKVMVEHGELIMGILCKKTL 637
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 638 GTSAGSL 644
[100][TOP]
>UniRef100_Q76II7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Umbelopsis
ramanniana RepID=Q76II7_UMBRA
Length = 341
Score = 157 bits (398), Expect = 3e-37
Identities = 72/123 (58%), Positives = 95/123 (77%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL G K T+RD+F+ KD+ MN +MW D+DG +P PAILKP+P+
Sbjct: 24 VSPQSNKPVMGIVQDTLCGINKFTRRDSFLSKDLVMNIVMWVPDWDGYLPTPAILKPKPM 83
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ ++IIPK IN L + H D E +I+P DT+V IE GEL+ G +CKKT+GT++
Sbjct: 84 WTGKQILSMIIPKGINCLTFHFNHPDGENTWISPRDTRVFIENGELICGIVCKKTVGTAS 143
Query: 362 GSL 370
G L
Sbjct: 144 GGL 146
[101][TOP]
>UniRef100_UPI0001796DD3 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase II subunit A) (DNA-directed RNA polymerase
III largest subunit) n=1 Tax=Equus caballus
RepID=UPI0001796DD3
Length = 1834
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 526 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 586 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 645
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 646 GTSAGSL 652
[102][TOP]
>UniRef100_UPI0000EBDCD2 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
isoform 4 n=1 Tax=Bos taurus RepID=UPI0000EBDCD2
Length = 1970
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 526 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 586 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 645
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 646 GTSAGSL 652
[103][TOP]
>UniRef100_UPI0000E24648 PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) n=1 Tax=Pan troglodytes
RepID=UPI0000E24648
Length = 1913
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 526 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 586 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 645
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 646 GTSAGSL 652
[104][TOP]
>UniRef100_UPI0000D9E16B PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) n=1 Tax=Macaca mulatta
RepID=UPI0000D9E16B
Length = 1193
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 526 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 586 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 645
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 646 GTSAGSL 652
[105][TOP]
>UniRef100_UPI00005A0B2C PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 23 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2C
Length = 1888
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 526 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 586 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 645
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 646 GTSAGSL 652
[106][TOP]
>UniRef100_UPI00005A0B2B PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 22 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2B
Length = 1892
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 528 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 587
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 588 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 647
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 648 GTSAGSL 654
[107][TOP]
>UniRef100_UPI00005A0B2A PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 21 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2A
Length = 1896
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 528 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 587
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 588 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 647
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 648 GTSAGSL 654
[108][TOP]
>UniRef100_UPI00005A0B29 PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 20 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B29
Length = 1891
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 495 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 554
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 555 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 614
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 615 GTSAGSL 621
[109][TOP]
>UniRef100_UPI00005A0B28 PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 19 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B28
Length = 1908
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 512 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 571
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 572 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 631
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 632 GTSAGSL 638
[110][TOP]
>UniRef100_UPI00005A0B27 PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide A isoform 18 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B27
Length = 1831
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 526 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 586 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 645
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 646 GTSAGSL 652
[111][TOP]
>UniRef100_UPI00005A0B26 PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide A isoform 17 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B26
Length = 1684
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 516 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 575
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 576 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 635
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 636 GTSAGSL 642
[112][TOP]
>UniRef100_UPI00005A0B25 PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide A isoform 16 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B25
Length = 1752
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 516 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 575
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 576 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 635
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 636 GTSAGSL 642
[113][TOP]
>UniRef100_UPI00005A0B24 PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 15 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B24
Length = 1924
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 528 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 587
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 588 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 647
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 648 GTSAGSL 654
[114][TOP]
>UniRef100_UPI00005A0B23 PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide A isoform 14 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B23
Length = 1653
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 499 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 558
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 559 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 618
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 619 GTSAGSL 625
[115][TOP]
>UniRef100_UPI00005A0B22 PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide A isoform 13 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B22
Length = 1722
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 499 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 558
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 559 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 618
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 619 GTSAGSL 625
[116][TOP]
>UniRef100_UPI00005A0B21 PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 12 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B21
Length = 1922
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 526 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 586 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 645
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 646 GTSAGSL 652
[117][TOP]
>UniRef100_UPI00005A0B20 PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 11 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B20
Length = 1923
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 527 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 586
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 587 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 646
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 647 GTSAGSL 653
[118][TOP]
>UniRef100_UPI00005A0B1D PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 1 n=2 Tax=Canis lupus familiaris
RepID=UPI00005A0B1D
Length = 1764
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 526 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 586 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 645
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 646 GTSAGSL 652
[119][TOP]
>UniRef100_UPI00005A0B1C PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide A isoform 8 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1C
Length = 1719
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 526 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 586 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 645
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 646 GTSAGSL 652
[120][TOP]
>UniRef100_UPI00005A0B1B PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide A isoform 7 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1B
Length = 1858
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 526 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 586 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 645
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 646 GTSAGSL 652
[121][TOP]
>UniRef100_UPI00005A0B1A PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 6 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1A
Length = 1767
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 512 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 571
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 572 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 631
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 632 GTSAGSL 638
[122][TOP]
>UniRef100_UPI00005A0B17 PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 3 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B17
Length = 1788
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 526 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 586 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 645
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 646 GTSAGSL 652
[123][TOP]
>UniRef100_UPI00005A0B16 PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 2 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B16
Length = 1922
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 526 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 586 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 645
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 646 GTSAGSL 652
[124][TOP]
>UniRef100_UPI0001B7A25C UPI0001B7A25C related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25C
Length = 1968
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 528 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 587
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 588 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 647
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 648 GTSAGSL 654
[125][TOP]
>UniRef100_UPI0001B7A25B UPI0001B7A25B related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25B
Length = 1932
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 526 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 586 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 645
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 646 GTSAGSL 652
[126][TOP]
>UniRef100_UPI0000DA33D8 PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) n=1 Tax=Rattus norvegicus
RepID=UPI0000DA33D8
Length = 1970
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 526 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 586 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 645
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 646 GTSAGSL 652
[127][TOP]
>UniRef100_UPI0001951285 220 kDa DNA-directed RNA polymerase polypeptide A n=1 Tax=Canis
lupus familiaris RepID=UPI0001951285
Length = 1969
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 526 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 586 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 645
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 646 GTSAGSL 652
[128][TOP]
>UniRef100_O35559 DNA-directed RNA polymerase n=1 Tax=Cricetulus griseus
RepID=O35559_CRIGR
Length = 1970
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 526 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 586 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 645
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 646 GTSAGSL 652
[129][TOP]
>UniRef100_O08847 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=O08847_MOUSE
Length = 1966
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 526 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 586 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 645
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 646 GTSAGSL 652
[130][TOP]
>UniRef100_B4PY98 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4PY98_DROYA
Length = 1889
Score = 157 bits (397), Expect = 3e-37
Identities = 76/127 (59%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD FI ++ MN LM+ +DGK+P P ILKPRPL
Sbjct: 518 ITPQANKPVMGIVQDTLTAVRKMTKRDVFITREQVMNLLMFLPTWDGKMPQPCILKPRPL 577
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N++R + H D E +I+PGDT+V +E GEL+ G LCKKTL
Sbjct: 578 WTGKQIFSLIIPGNVNMIRTHSTHPDEEDDGPYKWISPGDTKVMVEHGELIMGILCKKTL 637
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 638 GTSAGSL 644
[131][TOP]
>UniRef100_B3NUC1 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3NUC1_DROER
Length = 1889
Score = 157 bits (397), Expect = 3e-37
Identities = 76/127 (59%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD FI ++ MN LM+ +DGK+P P ILKPRPL
Sbjct: 518 ITPQANKPVMGIVQDTLTAVRKMTKRDVFITREQVMNLLMFLPTWDGKMPQPCILKPRPL 577
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N++R + H D E +I+PGDT+V +E GEL+ G LCKKTL
Sbjct: 578 WTGKQIFSLIIPGNVNMIRTHSTHPDEEDDGPYKWISPGDTKVMVEHGELIMGILCKKTL 637
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 638 GTSAGSL 644
[132][TOP]
>UniRef100_B4E3V7 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4E3V7_HUMAN
Length = 1935
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 491 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 550
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 551 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 610
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 611 GTSAGSL 617
[133][TOP]
>UniRef100_A6NN93 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=A6NN93_HUMAN
Length = 1970
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 526 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 586 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 645
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 646 GTSAGSL 652
[134][TOP]
>UniRef100_Q2PYR5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mortierella
verticillata RepID=Q2PYR5_9FUNG
Length = 1016
Score = 157 bits (397), Expect = 3e-37
Identities = 72/123 (58%), Positives = 94/123 (76%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL G RK TKRD F+ K++ MN +MW ++G +P PAILKP+PL
Sbjct: 439 VSPQSNKPVMGIVQDTLCGVRKFTKRDCFLTKEMVMNLVMWVPGWEGFLPTPAILKPKPL 498
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTG+Q+ ++IIPK IN + Y + H D E I+PGDT+V +E GEL+ G +CKKT+GTS
Sbjct: 499 WTGRQMLSMIIPKGINCICYHSTHPDNEESDISPGDTKVIVENGELICGIVCKKTVGTSG 558
Query: 362 GSL 370
G L
Sbjct: 559 GGL 561
[135][TOP]
>UniRef100_Q2PYR2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Umbelopsis
ramanniana RepID=Q2PYR2_UMBRA
Length = 571
Score = 157 bits (397), Expect = 3e-37
Identities = 72/123 (58%), Positives = 95/123 (77%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL G K T+RD+F+ KD+ MN +MW D+DG +P PAILKP+P+
Sbjct: 277 VSPQSNKPVMGIVQDTLAGVNKFTRRDSFLSKDLVMNIVMWVPDWDGYLPTPAILKPKPM 336
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ ++IIPK IN + H D ET +I+P DT+V IE GEL+ G +CKKT+GT++
Sbjct: 337 WTGKQILSMIIPKGINCQTFHFNHPDGETTWISPRDTRVFIENGELICGIVCKKTVGTAS 396
Query: 362 GSL 370
G L
Sbjct: 397 GGL 399
[136][TOP]
>UniRef100_P08775 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Mus musculus
RepID=RPB1_MOUSE
Length = 1970
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 526 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 586 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 645
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 646 GTSAGSL 652
[137][TOP]
>UniRef100_P24928 DNA-directed RNA polymerase II subunit RPB1 n=2
Tax=Euarchontoglires RepID=RPB1_HUMAN
Length = 1970
Score = 157 bits (397), Expect = 3e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 526 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 586 WTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 645
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 646 GTSAGSL 652
[138][TOP]
>UniRef100_UPI0000F2BF13 PREDICTED: similar to RNA polymerase II isoform 2 n=1
Tax=Monodelphis domestica RepID=UPI0000F2BF13
Length = 1932
Score = 157 bits (396), Expect = 4e-37
Identities = 78/127 (61%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 526 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LI+P IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 586 WTGKQIFSLIVPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 645
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 646 GTSAGSL 652
[139][TOP]
>UniRef100_UPI0000F2BF12 PREDICTED: similar to RNA polymerase II isoform 1 n=1
Tax=Monodelphis domestica RepID=UPI0000F2BF12
Length = 1970
Score = 157 bits (396), Expect = 4e-37
Identities = 78/127 (61%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 526 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LI+P IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 586 WTGKQIFSLIVPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSL 645
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 646 GTSAGSL 652
[140][TOP]
>UniRef100_B4NDK9 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4NDK9_DROWI
Length = 1890
Score = 157 bits (396), Expect = 4e-37
Identities = 75/127 (59%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD FI ++ MN LM+ +DGK+P P ILKPRP+
Sbjct: 518 ITPQANKPVMGIVQDTLTAVRKMTKRDVFITREQMMNLLMFLPTWDGKMPQPCILKPRPM 577
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N++R + H D E +I+PGDT+V +E GEL+ G LCKKTL
Sbjct: 578 WTGKQIFSLIIPGNVNMIRTHSTHPDEEDDGPYKWISPGDTKVMVEHGELIMGILCKKTL 637
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 638 GTSAGSL 644
[141][TOP]
>UniRef100_UPI0000546D90 PREDICTED: im:7136071 isoform 1 n=1 Tax=Danio rerio
RepID=UPI0000546D90
Length = 1972
Score = 156 bits (395), Expect = 6e-37
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 523 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 582
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN +R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 583 WTGKQIFSLIIPGHINAIRTHSTHPDEEDSGPYKNISPGDTKVIVENGELIMGILCKKSL 642
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 643 GTSAGSL 649
[142][TOP]
>UniRef100_B4MAN9 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
RepID=B4MAN9_DROVI
Length = 1889
Score = 156 bits (395), Expect = 6e-37
Identities = 76/127 (59%), Positives = 95/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD FI ++ MN LM+ +DGK+P P ILKPRPL
Sbjct: 518 ITPQANKPVMGIVQDTLTAVRKMTKRDVFITREQVMNLLMFLPTWDGKMPQPCILKPRPL 577
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N++R H D E +I+PGDT+V +E GEL+ G LCKKTL
Sbjct: 578 WTGKQIFSLIIPGNVNMIRAHETHPDEEDDGPYKWISPGDTKVMVEHGELIMGILCKKTL 637
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 638 GTSAGSL 644
[143][TOP]
>UniRef100_Q9XZU9 DNA-directed RNA polymerase n=1 Tax=Drosophila subobscura
RepID=Q9XZU9_DROSU
Length = 1889
Score = 156 bits (394), Expect = 8e-37
Identities = 75/127 (59%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD FI ++ MN LM+ +DGK+P P ILKPRPL
Sbjct: 518 ITPQANKPVMGIVQDTLTAVRKMTKRDVFITREQVMNLLMFLPTWDGKMPQPCILKPRPL 577
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N++R + H D E +I+PGDT+V +E G+L+ G LCKKTL
Sbjct: 578 WTGKQIFSLIIPGNVNMIRTHSTHPDEEDDGPYKWISPGDTKVMVEHGDLIMGILCKKTL 637
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 638 GTSAGSL 644
[144][TOP]
>UniRef100_Q9XZU8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Drosophila
pseudoobscura pseudoobscura RepID=Q9XZU8_DROPS
Length = 1811
Score = 156 bits (394), Expect = 8e-37
Identities = 75/127 (59%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD FI ++ MN LM+ +DGK+P P ILKPRPL
Sbjct: 440 ITPQANKPVMGIVQDTLTAVRKMTKRDVFITREQVMNLLMFLPTWDGKMPQPCILKPRPL 499
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N++R + H D E +I+PGDT+V +E G+L+ G LCKKTL
Sbjct: 500 WTGKQIFSLIIPGNVNMIRTHSTHPDEEDDGPYKWISPGDTKVMVEHGDLIMGILCKKTL 559
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 560 GTSAGSL 566
[145][TOP]
>UniRef100_Q9XZS2 DNA-directed RNA polymerase n=1 Tax=Drosophila madeirensis
RepID=Q9XZS2_DROMD
Length = 1889
Score = 156 bits (394), Expect = 8e-37
Identities = 75/127 (59%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD FI ++ MN LM+ +DGK+P P ILKPRPL
Sbjct: 518 ITPQANKPVMGIVQDTLTAVRKMTKRDVFITREQVMNLLMFLPTWDGKMPQPCILKPRPL 577
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N++R + H D E +I+PGDT+V +E G+L+ G LCKKTL
Sbjct: 578 WTGKQIFSLIIPGNVNMIRTHSTHPDEEDDGPYKWISPGDTKVMVEHGDLIMGILCKKTL 637
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 638 GTSAGSL 644
[146][TOP]
>UniRef100_Q9XZS1 DNA-directed RNA polymerase n=1 Tax=Drosophila guanche
RepID=Q9XZS1_DROGU
Length = 1889
Score = 156 bits (394), Expect = 8e-37
Identities = 75/127 (59%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD FI ++ MN LM+ +DGK+P P ILKPRPL
Sbjct: 518 ITPQANKPVMGIVQDTLTAVRKMTKRDVFITREQVMNLLMFLPTWDGKMPQPCILKPRPL 577
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N++R + H D E +I+PGDT+V +E G+L+ G LCKKTL
Sbjct: 578 WTGKQIFSLIIPGNVNMIRTHSTHPDEEDDGPYKWISPGDTKVMVEHGDLIMGILCKKTL 637
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 638 GTSAGSL 644
[147][TOP]
>UniRef100_Q29IN2 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura
pseudoobscura RepID=Q29IN2_DROPS
Length = 1889
Score = 156 bits (394), Expect = 8e-37
Identities = 75/127 (59%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD FI ++ MN LM+ +DGK+P P ILKPRPL
Sbjct: 518 ITPQANKPVMGIVQDTLTAVRKMTKRDVFITREQVMNLLMFLPTWDGKMPQPCILKPRPL 577
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N++R + H D E +I+PGDT+V +E G+L+ G LCKKTL
Sbjct: 578 WTGKQIFSLIIPGNVNMIRTHSTHPDEEDDGPYKWISPGDTKVMVEHGDLIMGILCKKTL 637
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 638 GTSAGSL 644
[148][TOP]
>UniRef100_O02462 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pedetontus saltator
RepID=O02462_9INSE
Length = 722
Score = 156 bits (394), Expect = 8e-37
Identities = 76/127 (59%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD F+EK+ MN LM +DGK+P PAILKP+P+
Sbjct: 165 ITPQANKPVMGIVQDTLTAVRKMTKRDVFLEKEQMMNILMHLPIWDGKMPQPAILKPKPM 224
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQVF+LIIP +N++R + H D E +I+PGDT+V +E GEL+ G LCKKTL
Sbjct: 225 WTGKQVFSLIIPGNVNMIRTHSTHPDDEDDGPYKWISPGDTKVMVEHGELVMGILCKKTL 284
Query: 350 GTSNGSL 370
G S GSL
Sbjct: 285 GASAGSL 291
[149][TOP]
>UniRef100_O02452 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mastigoproctus
giganteus RepID=O02452_MASGI
Length = 887
Score = 156 bits (394), Expect = 8e-37
Identities = 73/127 (57%), Positives = 100/127 (78%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQ+N+PVMGIVQDTL RK+TKRD F+EKD MN LM+ +DGK+P PA+LKP+PL
Sbjct: 165 ITPQSNKPVMGIVQDTLTAVRKMTKRDVFLEKDQMMNLLMFLPIWDGKMPMPAVLKPKPL 224
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +NL+R + H D E +I+PGDT+V IE G+L++G +CKKT+
Sbjct: 225 WTGKQLFSLIIPDNVNLIRTHSTHPDDEDDGPYKWISPGDTKVLIEHGQLISGIVCKKTV 284
Query: 350 GTSNGSL 370
G+++GSL
Sbjct: 285 GSASGSL 291
[150][TOP]
>UniRef100_B7PJA3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixodes scapularis
RepID=B7PJA3_IXOSC
Length = 1937
Score = 156 bits (394), Expect = 8e-37
Identities = 75/127 (59%), Positives = 98/127 (77%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQ+N+PVMGIVQDTL RK+TKRD F+EKD M LM+ +DGK+P PAILKP+PL
Sbjct: 526 ITPQSNKPVMGIVQDTLTAVRKMTKRDIFLEKDQMMTILMFLPIWDGKMPMPAILKPKPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +NL+R + H D E +I+PGDT+V IE GEL++G +CKKT+
Sbjct: 586 WTGKQIFSLIIPGNVNLIRTHSTHPDEEDDGPYKWISPGDTKVLIEHGELISGIVCKKTV 645
Query: 350 GTSNGSL 370
G S+GSL
Sbjct: 646 GASSGSL 652
[151][TOP]
>UniRef100_B4L732 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4L732_DROMO
Length = 1889
Score = 156 bits (394), Expect = 8e-37
Identities = 75/127 (59%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD FI ++ MN LM+ +DGK+P P ILKPRPL
Sbjct: 518 ITPQANKPVMGIVQDTLTAVRKMTKRDVFITREQVMNLLMFLPTWDGKMPQPCILKPRPL 577
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N++R + H D E +I+PGDT+V +E G+L+ G LCKKTL
Sbjct: 578 WTGKQIFSLIIPGNVNMIRTHSTHPDEEDDGPYKWISPGDTKVMVEHGDLIMGILCKKTL 637
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 638 GTSAGSL 644
[152][TOP]
>UniRef100_B4JXA6 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4JXA6_DROGR
Length = 1889
Score = 156 bits (394), Expect = 8e-37
Identities = 75/127 (59%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD FI ++ MN LM+ +DGK+P P ILKPRPL
Sbjct: 518 ITPQANKPVMGIVQDTLTAVRKMTKRDVFITREQVMNLLMFLPTWDGKMPQPCILKPRPL 577
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N++R + H D E +I+PGDT+V +E G+L+ G LCKKTL
Sbjct: 578 WTGKQIFSLIIPGNVNMIRTHSTHPDEEDDGPYKWISPGDTKVMVEHGDLIMGILCKKTL 637
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 638 GTSAGSL 644
[153][TOP]
>UniRef100_B4H2R8 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis
RepID=B4H2R8_DROPE
Length = 1804
Score = 156 bits (394), Expect = 8e-37
Identities = 75/127 (59%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD FI ++ MN LM+ +DGK+P P ILKPRPL
Sbjct: 518 ITPQANKPVMGIVQDTLTAVRKMTKRDVFITREQVMNLLMFLPTWDGKMPQPCILKPRPL 577
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N++R + H D E +I+PGDT+V +E G+L+ G LCKKTL
Sbjct: 578 WTGKQIFSLIIPGNVNMIRTHSTHPDEEDDGPYKWISPGDTKVMVEHGDLIMGILCKKTL 637
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 638 GTSAGSL 644
[154][TOP]
>UniRef100_Q76II6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mortierella cf.
elongata IAM14862 RepID=Q76II6_9FUNG
Length = 336
Score = 156 bits (394), Expect = 8e-37
Identities = 71/121 (58%), Positives = 94/121 (77%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL G RK TKRD F+ K++ MN +MW ++G +P PAILKP+PL
Sbjct: 28 VSPQSNKPVMGIVQDTLCGVRKFTKRDCFLTKEMVMNLVMWVPGWEGFLPTPAILKPKPL 87
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ ++IIPK IN + + + H D+E I+PGDT+V +E GEL+ G +CKKT+GTS
Sbjct: 88 WTGKQMVSMIIPKGINCITFHSTHPDSEESDISPGDTKVIVENGELICGIVCKKTVGTSG 147
Query: 362 G 364
G
Sbjct: 148 G 148
[155][TOP]
>UniRef100_Q2PYQ5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Synchytrium
macrosporum RepID=Q2PYQ5_9FUNG
Length = 808
Score = 156 bits (394), Expect = 8e-37
Identities = 77/121 (63%), Positives = 89/121 (73%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ N PVMGIVQDTL G RK TKRDTF++ D+ MN LMW D+DG +P P I+KP PL
Sbjct: 442 VSPQKNAPVMGIVQDTLCGVRKFTKRDTFLDMDIMMNLLMWVPDWDGTLPTPCIIKPIPL 501
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ +LIIP INL Y A H D E G +PGDT+V IE GEL+ G LCKKT+G+S
Sbjct: 502 WTGKQAMSLIIP-NINLTAYHAAHPDKEVGDNSPGDTKVLIEHGELVMGILCKKTVGSSA 560
Query: 362 G 364
G
Sbjct: 561 G 561
[156][TOP]
>UniRef100_A1YIB5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mucor hiemalis
RepID=A1YIB5_9FUNG
Length = 1009
Score = 156 bits (394), Expect = 8e-37
Identities = 71/123 (57%), Positives = 93/123 (75%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL G RK T RD F+ KD+ MN +MW +DG +P PAILKP+P+
Sbjct: 438 VSPQSNKPVMGIVQDTLCGIRKFTLRDCFMTKDLVMNIVMWVPSWDGYIPPPAILKPKPM 497
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +++IPK IN + + H D E+ I+PGDT+V IE GEL+ G +CKKT+GT+
Sbjct: 498 WTGKQIVSMVIPKGINCQTFHSTHPDGESTLISPGDTRVIIENGELICGIVCKKTVGTAG 557
Query: 362 GSL 370
G L
Sbjct: 558 GGL 560
[157][TOP]
>UniRef100_Q873P7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Conidiobolus
coronatus RepID=Q873P7_9FUNG
Length = 336
Score = 155 bits (393), Expect = 1e-36
Identities = 70/123 (56%), Positives = 97/123 (78%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL G RK T+RDTF+++ + MN LMW +++G +P PA++ P+PL
Sbjct: 28 VSPQSNKPVMGIVQDTLCGIRKFTQRDTFLDRALVMNLLMWVPNWNGVLPTPAVITPKPL 87
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +LIIPKQ N++ + H D E FI+PGDT+V + G+L+AG +CKKT+GTS+
Sbjct: 88 WTGKQIVSLIIPKQTNMITTHSTHPDGENTFISPGDTKVIVYDGDLVAGIVCKKTVGTSS 147
Query: 362 GSL 370
G L
Sbjct: 148 GGL 150
[158][TOP]
>UniRef100_Q2PYR6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coemansia reversa
RepID=Q2PYR6_9FUNG
Length = 1013
Score = 155 bits (393), Expect = 1e-36
Identities = 70/123 (56%), Positives = 92/123 (74%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
+SPQ+N+PVMGIVQDTL RK T+RD F++ D+ M +MW D+DG +P P ILKP+PL
Sbjct: 444 ISPQSNKPVMGIVQDTLCAIRKFTRRDNFLDTDMIMLLMMWLPDWDGTLPTPCILKPKPL 503
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+++++IPK N R S H D ET +I+PGDT+V I GEL+ G +CKKT+GTS
Sbjct: 504 WTGKQIYSMVIPKGTNCYRESEGHPDGETTWISPGDTKVYIRDGELVCGMVCKKTVGTSE 563
Query: 362 GSL 370
G L
Sbjct: 564 GGL 566
[159][TOP]
>UniRef100_Q9NJN2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Semibalanus
balanoides RepID=Q9NJN2_SEMBA
Length = 624
Score = 155 bits (392), Expect = 1e-36
Identities = 73/127 (57%), Positives = 97/127 (76%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+N+PVMGIVQDTL RK+TKRD F+EK+ MN LM+ +DGK+P PAI+KPRPL
Sbjct: 165 VTPQSNKPVMGIVQDTLTAVRKMTKRDVFLEKEEMMNMLMFLPTWDGKIPVPAIIKPRPL 224
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N++R + H D E +++PGDT+V ++ GEL+ G LCKK+L
Sbjct: 225 WTGKQLFSLIIPGNVNMVRTHSTHPDDEDSGPYKWVSPGDTKVLVDNGELIMGILCKKSL 284
Query: 350 GTSNGSL 370
G S GSL
Sbjct: 285 GASAGSL 291
[160][TOP]
>UniRef100_Q17085 DNA-directed RNA polymerase (Fragment) n=1 Tax=Artemia salina
RepID=Q17085_ARTSA
Length = 1341
Score = 155 bits (392), Expect = 1e-36
Identities = 74/127 (58%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQANRPVMGIVQDTL RK+TKRD F+EK+ M LM+ +DGK+P PAILKP+PL
Sbjct: 438 ITPQANRPVMGIVQDTLCAVRKMTKRDVFLEKEQMMTLLMYLPTWDGKLPQPAILKPKPL 497
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F LIIP ++N+++ + H D E +I+PGDT+V +E GEL+ G LCKKTL
Sbjct: 498 WTGKQLFTLIIPGKVNMMKTHSTHPDDEDDGPYKWISPGDTKVMVEHGELIMGILCKKTL 557
Query: 350 GTSNGSL 370
G S GS+
Sbjct: 558 GASAGSI 564
[161][TOP]
>UniRef100_UPI000179338A PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179338A
Length = 1862
Score = 155 bits (391), Expect = 2e-36
Identities = 75/127 (59%), Positives = 95/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD F+EK+ MN LM +DGK+P P ILKP+P+
Sbjct: 519 ITPQANKPVMGIVQDTLTAIRKMTKRDVFLEKEQMMNLLMHLPIWDGKMPTPCILKPKPM 578
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +NL+R + H D E +I+PGDT+V +E GEL+ G LCK TL
Sbjct: 579 WTGKQLFSLIIPGNVNLIRTHSTHPDEEDNGPYKWISPGDTKVMVEHGELVMGILCKSTL 638
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 639 GTSAGSL 645
[162][TOP]
>UniRef100_Q84KP6 DNA-directed RNA polymerase n=1 Tax=Cyanidioschyzon merolae
RepID=Q84KP6_CYAME
Length = 1819
Score = 155 bits (391), Expect = 2e-36
Identities = 74/123 (60%), Positives = 93/123 (75%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQANRPVMGIVQD+LLGC T RDTF+E+D N L+ FDG++PAPAILKPRPL
Sbjct: 521 VSPQANRPVMGIVQDSLLGCMLFTLRDTFLEEDTVFNLLLHLPHFDGRIPAPAILKPRPL 580
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+F+L++P +NL R S H D E +TP DT+V I+ GEL+ G + K+T+G+S
Sbjct: 581 WTGKQIFSLLLPDGVNLERLSNGHPDHERTIMTPSDTRVLIQNGELITGIVDKRTVGSSA 640
Query: 362 GSL 370
GSL
Sbjct: 641 GSL 643
[163][TOP]
>UniRef100_Q9NJL4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Limnadia
lenticularis RepID=Q9NJL4_9CRUS
Length = 624
Score = 155 bits (391), Expect = 2e-36
Identities = 75/127 (59%), Positives = 95/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD F+EK+ MN LM+ +DGK+P PAI+KPRPL
Sbjct: 165 ITPQANKPVMGIVQDTLCAVRKMTKRDVFLEKEQMMNLLMFLPTWDGKMPQPAIIKPRPL 224
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F LIIP +N++R + H D E +I+PGDT+V +E GEL+ G LCKKTL
Sbjct: 225 WTGKQLFTLIIPGNVNMIRTHSTHPDDEDDGPYKWISPGDTKVIVENGELIMGILCKKTL 284
Query: 350 GTSNGSL 370
G S SL
Sbjct: 285 GASAASL 291
[164][TOP]
>UniRef100_Q873Q3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Allomyces sp. YT-TT1
RepID=Q873Q3_9FUNG
Length = 334
Score = 155 bits (391), Expect = 2e-36
Identities = 71/123 (57%), Positives = 97/123 (78%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
+SPQ+N+PVMGIVQDTL G K T+RDTF++K++ MN LMW ++DG VP PAI+KP+PL
Sbjct: 28 ISPQSNKPVMGIVQDTLCGITKFTRRDTFMDKNMVMNLLMWVPNWDGNVPPPAIMKPKPL 87
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +L+IPK +N + + + H D E+ I+PGDT+V +E GELLAG +CKKT+G +
Sbjct: 88 WTGKQILSLVIPK-VNCITHHSTHPDDESTDISPGDTRVIVEDGELLAGIVCKKTVGAAA 146
Query: 362 GSL 370
G L
Sbjct: 147 GGL 149
[165][TOP]
>UniRef100_Q76II9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dimargaris
cristalligena RepID=Q76II9_9FUNG
Length = 341
Score = 155 bits (391), Expect = 2e-36
Identities = 71/123 (57%), Positives = 92/123 (74%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQAN+PVMGIVQDTL R+ TKRDTF++ D+ MN ++W D+DG +P P ILKP+PL
Sbjct: 24 VSPQANKPVMGIVQDTLCALRRFTKRDTFVDYDMVMNLMLWVPDWDGLIPQPCILKPKPL 83
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
W+GKQ+F+++IP IN R+ + H D E I+PGDT+V IE G LLAG +CKKT+G S
Sbjct: 84 WSGKQIFSMVIPSGINCTRFHSTHPDEEKTDISPGDTKVIIEDGVLLAGIVCKKTVGASE 143
Query: 362 GSL 370
L
Sbjct: 144 SGL 146
[166][TOP]
>UniRef100_A1YIB9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Allomyces macrogynus
RepID=A1YIB9_ALLMA
Length = 1008
Score = 155 bits (391), Expect = 2e-36
Identities = 71/123 (57%), Positives = 97/123 (78%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
+SPQ+N+PVMGIVQDTL G K T+RDTF++K++ MN LMW ++DG VP PAI+KP+PL
Sbjct: 436 ISPQSNKPVMGIVQDTLCGITKFTRRDTFMDKNMVMNLLMWVPNWDGNVPPPAIMKPKPL 495
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +L+IPK +N + + + H D E+ I+PGDT+V +E GELLAG +CKKT+G +
Sbjct: 496 WTGKQILSLVIPK-VNCITHHSTHPDDESTDISPGDTRVIVEDGELLAGIVCKKTVGAAA 554
Query: 362 GSL 370
G L
Sbjct: 555 GGL 557
[167][TOP]
>UniRef100_Q6JTZ3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Scutigerella sp.
Scu3 RepID=Q6JTZ3_9MYRI
Length = 624
Score = 154 bits (390), Expect = 2e-36
Identities = 74/127 (58%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQ+NRPVMGIVQDTL RK+TKRD F++KD MN LM+ ++GKVP P ILKP+P
Sbjct: 165 ITPQSNRPVMGIVQDTLTAVRKMTKRDVFLDKDQMMNLLMFLPTWNGKVPQPCILKPKPQ 224
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N +R + H D E +I+PGDT+V +E G+L++G LCKKTL
Sbjct: 225 WTGKQIFSLIIPGNVNCIRTHSTHPDEEDDGPYKWISPGDTKVLVEHGDLISGILCKKTL 284
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 285 GTSAGSL 291
[168][TOP]
>UniRef100_Q2PYR0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Boothiomyces
macroporosum RepID=Q2PYR0_9FUNG
Length = 999
Score = 154 bits (390), Expect = 2e-36
Identities = 76/119 (63%), Positives = 92/119 (77%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ N PVMGIVQDTL G RK TKRDTF+ +D+ MN LMW ++DG +P PAILKP PL
Sbjct: 432 VSPQKNAPVMGIVQDTLCGIRKFTKRDTFLHRDLLMNLLMWVPNWDGIIPMPAILKPIPL 491
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTS 358
WT KQV ++IIP QIN++ + + H D E I+PGDT+V IE GELLAG LCKKT+G+S
Sbjct: 492 WTAKQVMSIIIP-QINMIGFHSTHPDDENTDISPGDTKVIIENGELLAGILCKKTVGSS 549
[169][TOP]
>UniRef100_Q2PYQ1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Olpidium brassicae
RepID=Q2PYQ1_9FUNG
Length = 585
Score = 154 bits (390), Expect = 2e-36
Identities = 72/123 (58%), Positives = 92/123 (74%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+P AN+P MGIVQDTL G RK+TKRD F++K MN +MW ++DG +P PAI KP+PL
Sbjct: 278 VAPAANKPCMGIVQDTLCGVRKMTKRDVFLDKAFVMNVVMWIPNWDGNLPVPAIFKPKPL 337
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+F+L IPK INL + + H D E I+PGDT+V IE G++LAG +CKKT+G S
Sbjct: 338 WTGKQIFSLTIPKGINLQAFHSTHPDNEHTDISPGDTKVIIENGDVLAGIICKKTVGASP 397
Query: 362 GSL 370
G L
Sbjct: 398 GGL 400
[170][TOP]
>UniRef100_Q9AXN1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Botryocladia
uvarioides RepID=Q9AXN1_9FLOR
Length = 1712
Score = 154 bits (389), Expect = 3e-36
Identities = 76/123 (61%), Positives = 94/123 (76%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ N+PVMGIVQDTLLGC T+RDTFIE+DV MN LM D+DG VP PAI KPRPL
Sbjct: 421 VSPQGNKPVMGIVQDTLLGCMLFTQRDTFIERDVMMNLLMHVGDWDGVVPEPAIYKPRPL 480
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+F+LI+P +NL+RY+ H D E I+PGDT+V I +G+L+ G + KKT+G+S
Sbjct: 481 WTGKQIFSLILP-PVNLIRYNITHPDEEQEEISPGDTKVYISQGQLICGIVDKKTVGSSA 539
Query: 362 GSL 370
L
Sbjct: 540 NGL 542
[171][TOP]
>UniRef100_A8IRZ2 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IRZ2_CHLRE
Length = 1789
Score = 154 bits (389), Expect = 3e-36
Identities = 75/123 (60%), Positives = 91/123 (73%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQAN+PVMGIVQD LLG R +TKRD FIEKD FMN +M ED+DG VP PA+LKPRPL
Sbjct: 522 VSPQANKPVMGIVQDALLGTRMMTKRDIFIEKDNFMNCVMGIEDWDGTVPMPAVLKPRPL 581
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+F++ +P +NL SAW+ D + ++ D QV I +GELL G LCKKT+G
Sbjct: 582 WTGKQIFSMFVP-DVNLKNKSAWYKDADVPDMSVDDAQVLIRQGELLTGALCKKTVGNGA 640
Query: 362 GSL 370
G L
Sbjct: 641 GGL 643
[172][TOP]
>UniRef100_Q2PYT1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coelomomyces
stegomyiae RepID=Q2PYT1_9FUNG
Length = 542
Score = 154 bits (389), Expect = 3e-36
Identities = 75/123 (60%), Positives = 92/123 (74%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ N+PVMGIVQDTL G RK T+RDTF+ K M LMW +DG VP PAILKP+PL
Sbjct: 248 VSPQGNKPVMGIVQDTLCGIRKFTQRDTFLTKSTVMCILMWVPGWDGNVPIPAILKPKPL 307
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +LIIPK +N + + + H D E I+PGDT+V +E G LLAG +CKKT+GTS+
Sbjct: 308 WTGKQILSLIIPK-VNCIAFHSTHPDDEKTDISPGDTKVIVEDGHLLAGIVCKKTVGTSS 366
Query: 362 GSL 370
G L
Sbjct: 367 GGL 369
[173][TOP]
>UniRef100_A1YIC2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coelomomyces
stegomyiae RepID=A1YIC2_9FUNG
Length = 1014
Score = 154 bits (389), Expect = 3e-36
Identities = 75/123 (60%), Positives = 92/123 (74%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ N+PVMGIVQDTL G RK T+RDTF+ K M LMW +DG VP PAILKP+PL
Sbjct: 442 VSPQGNKPVMGIVQDTLCGIRKFTQRDTFLTKSTVMCILMWVPGWDGNVPIPAILKPKPL 501
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +LIIPK +N + + + H D E I+PGDT+V +E G LLAG +CKKT+GTS+
Sbjct: 502 WTGKQILSLIIPK-VNCIAFHSTHPDDEKTDISPGDTKVIVEDGHLLAGIVCKKTVGTSS 560
Query: 362 GSL 370
G L
Sbjct: 561 GGL 563
[174][TOP]
>UniRef100_Q2PYQ8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Paraglomus occultum
RepID=Q2PYQ8_9GLOM
Length = 847
Score = 154 bits (388), Expect = 4e-36
Identities = 76/125 (60%), Positives = 94/125 (75%), Gaps = 2/125 (1%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL RK TKRD F+ +D+ MN LMW D+DG +P P ILKP P+
Sbjct: 277 VSPQSNKPVMGIVQDTLCAIRKFTKRDCFLTRDLVMNILMWVPDWDGHIPIPCILKPVPM 336
Query: 182 WTGKQVFNLIIPKQINL--LRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGT 355
WTGKQ+ ++IIPK +N LR+S H D ET I+PGDT+V IE GELL+G +CKKT+GT
Sbjct: 337 WTGKQILSIIIPKGVNSDNLRHST-HPDNETSDISPGDTKVLIEDGELLSGIVCKKTVGT 395
Query: 356 SNGSL 370
S L
Sbjct: 396 SQQGL 400
[175][TOP]
>UniRef100_Q9NJN0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ctenolepisma lineata
RepID=Q9NJN0_CTELI
Length = 624
Score = 153 bits (387), Expect = 5e-36
Identities = 75/127 (59%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQ+N+PVMGIVQDTL RK+TKRD F+EK+ MN LM +DGK+P P+ILKP+PL
Sbjct: 165 ITPQSNKPVMGIVQDTLTAVRKMTKRDVFLEKEQMMNILMHLPIWDGKMPYPSILKPKPL 224
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQVF+LIIP +N+ R + H D E +I+PGDT+V +E GEL+ G LCKKTL
Sbjct: 225 WTGKQVFSLIIPGNVNVTRTHSTHPDDEDDGPYKWISPGDTKVMVEHGELIMGILCKKTL 284
Query: 350 GTSNGSL 370
G+S GSL
Sbjct: 285 GSSAGSL 291
[176][TOP]
>UniRef100_Q9NJK6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cypridopsis vidua
RepID=Q9NJK6_9CRUS
Length = 624
Score = 153 bits (387), Expect = 5e-36
Identities = 75/127 (59%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD F+EKD M+ LM +DG++P PAILKP+PL
Sbjct: 165 ITPQANKPVMGIVQDTLCAVRKMTKRDVFLEKDQIMDLLMHLPRWDGRMPVPAILKPKPL 224
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +NL+R + H D E +I+PGDT+V IE G+L+ G LCK+TL
Sbjct: 225 WTGKQLFSLIIPGNVNLVRTHSTHPDDEDDGPYKWISPGDTKVLIEHGQLIMGILCKRTL 284
Query: 350 GTSNGSL 370
G S GSL
Sbjct: 285 GASAGSL 291
[177][TOP]
>UniRef100_Q873Q5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhizophydium sp.
YT-GR1 RepID=Q873Q5_9FUNG
Length = 334
Score = 153 bits (387), Expect = 5e-36
Identities = 76/123 (61%), Positives = 92/123 (74%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ N PVMGIVQDTL G RK TKRDTF+ +D+ MN LMW +DG +P PAILKP PL
Sbjct: 28 VSPQKNAPVMGIVQDTLCGVRKFTKRDTFLRRDMVMNLLMWVPSWDGVIPCPAILKPIPL 87
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WT KQ+ +LIIP INL+ + + H D E I+PGDT+V IE GELLAG LCK+T+G+S
Sbjct: 88 WTSKQIMSLIIP-NINLIGFHSAHPDGENTDISPGDTKVIIEDGELLAGILCKRTVGSSA 146
Query: 362 GSL 370
G +
Sbjct: 147 GGI 149
[178][TOP]
>UniRef100_A1YIB7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glomus mosseae
RepID=A1YIB7_GLOMO
Length = 1054
Score = 153 bits (387), Expect = 5e-36
Identities = 77/125 (61%), Positives = 94/125 (75%), Gaps = 2/125 (1%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL RK TKRD F+ KD+ MN LMW +D+DGK+P P ILKP PL
Sbjct: 463 VSPQSNKPVMGIVQDTLCAIRKFTKRDCFLSKDLVMNILMWVKDWDGKIPIPCILKPIPL 522
Query: 182 WTGKQVFNLIIPKQINL--LRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGT 355
WTGKQ+ ++IIPK IN LR+S H D E ++PGDT+V IE GELL G +CKKT+GT
Sbjct: 523 WTGKQILSMIIPKGINSXNLRHST-HPDGENTDMSPGDTKVLIEDGELLCGIVCKKTVGT 581
Query: 356 SNGSL 370
+ L
Sbjct: 582 AQQGL 586
[179][TOP]
>UniRef100_B4R348 DNA-directed RNA polymerase n=1 Tax=Drosophila simulans
RepID=B4R348_DROSI
Length = 1150
Score = 153 bits (386), Expect = 6e-36
Identities = 74/127 (58%), Positives = 95/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD FI ++ MN LM+ +D K+P P ILKPRPL
Sbjct: 518 ITPQANKPVMGIVQDTLTAVRKMTKRDVFITREQVMNLLMFLPTWDAKMPQPCILKPRPL 577
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTET----GFITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N++R + H D E +I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 578 WTGKQIFSLIIPGNVNMIRTHSTHPDEEDEGPYKWISPGDTKVMVEHGELIMGILCKKSL 637
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 638 GTSAGSL 644
[180][TOP]
>UniRef100_B4IK28 DNA-directed RNA polymerase n=1 Tax=Drosophila sechellia
RepID=B4IK28_DROSE
Length = 1887
Score = 153 bits (386), Expect = 6e-36
Identities = 74/127 (58%), Positives = 95/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD FI ++ MN LM+ +D K+P P ILKPRPL
Sbjct: 518 ITPQANKPVMGIVQDTLTAVRKMTKRDVFITREQVMNLLMFLPTWDAKMPQPCILKPRPL 577
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTET----GFITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N++R + H D E +I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 578 WTGKQIFSLIIPGNVNMIRTHSTHPDEEDEGPYKWISPGDTKVMVEHGELIMGILCKKSL 637
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 638 GTSAGSL 644
[181][TOP]
>UniRef100_A9UNH9 DNA-directed RNA polymerase n=1 Tax=Drosophila melanogaster
RepID=A9UNH9_DROME
Length = 1887
Score = 153 bits (386), Expect = 6e-36
Identities = 74/127 (58%), Positives = 95/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD FI ++ MN LM+ +D K+P P ILKPRPL
Sbjct: 518 ITPQANKPVMGIVQDTLTAVRKMTKRDVFITREQVMNLLMFLPTWDAKMPQPCILKPRPL 577
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTET----GFITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N++R + H D E +I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 578 WTGKQIFSLIIPGNVNMIRTHSTHPDEEDEGPYKWISPGDTKVMVEHGELIMGILCKKSL 637
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 638 GTSAGSL 644
[182][TOP]
>UniRef100_Q2PYS7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Batrachochytrium
dendrobatidis RepID=Q2PYS7_BATDE
Length = 985
Score = 153 bits (386), Expect = 6e-36
Identities = 75/119 (63%), Positives = 92/119 (77%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ N PVMGIVQDTL G RK +KRDTF+++D+ MN LMW D+DG +P PAILKP PL
Sbjct: 426 VSPQKNAPVMGIVQDTLCGIRKFSKRDTFLKRDLMMNLLMWVPDWDGIIPTPAILKPIPL 485
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTS 358
WT KQ+ +LI+PK INL+ + A H D E I+PGDT+V IE GELL G LCK+T+G+S
Sbjct: 486 WTAKQIISLILPK-INLVGFHAAHPDNEKTDISPGDTKVLIEDGELLMGILCKRTVGSS 543
[183][TOP]
>UniRef100_Q2PYR9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Conidiobolus
coronatus RepID=Q2PYR9_9FUNG
Length = 749
Score = 153 bits (386), Expect = 6e-36
Identities = 69/123 (56%), Positives = 95/123 (77%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL G RK T+RD F+++ + MN LMW +++G +P PA++ P+PL
Sbjct: 442 VSPQSNKPVMGIVQDTLCGIRKFTQRDAFLDRALVMNLLMWVPNWNGVLPTPAVIAPKPL 501
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +LIIPKQ N++ + H D E FI+PGDT+V I G+L+AG +CKKT+GT +
Sbjct: 502 WTGKQIVSLIIPKQTNMMTTHSTHPDGENTFISPGDTKVIIHDGDLVAGIVCKKTVGTPS 561
Query: 362 GSL 370
G L
Sbjct: 562 GGL 564
[184][TOP]
>UniRef100_A1YIC0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Catenaria
anguillulae RepID=A1YIC0_9FUNG
Length = 1020
Score = 153 bits (386), Expect = 6e-36
Identities = 70/123 (56%), Positives = 96/123 (78%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL G K T+RDTF+++ + MN LMW +DG +P PAI+KP+P+
Sbjct: 448 VSPQSNKPVMGIVQDTLCGITKFTRRDTFMDRAMVMNLLMWVPGWDGNMPPPAIVKPKPM 507
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +LIIPK +N + + + H D ET ++PGDT+V +E GEL+AG +CKKT+GT+
Sbjct: 508 WTGKQIMSLIIPK-VNAVTFHSTHPDGETDLLSPGDTRVIVEDGELVAGIVCKKTVGTAA 566
Query: 362 GSL 370
G L
Sbjct: 567 GGL 569
[185][TOP]
>UniRef100_P04052 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Drosophila
melanogaster RepID=RPB1_DROME
Length = 1887
Score = 153 bits (386), Expect = 6e-36
Identities = 74/127 (58%), Positives = 95/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD FI ++ MN LM+ +D K+P P ILKPRPL
Sbjct: 518 ITPQANKPVMGIVQDTLTAVRKMTKRDVFITREQVMNLLMFLPTWDAKMPQPCILKPRPL 577
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTET----GFITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N++R + H D E +I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 578 WTGKQIFSLIIPGNVNMIRTHSTHPDEEDEGPYKWISPGDTKVMVEHGELIMGILCKKSL 637
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 638 GTSAGSL 644
[186][TOP]
>UniRef100_UPI00017B0A92 UPI00017B0A92 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B0A92
Length = 1714
Score = 152 bits (385), Expect = 8e-36
Identities = 76/127 (59%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+++ MN LM+ +DGK+P PAILKPR L
Sbjct: 504 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLDRGEVMNLLMFLSTWDGKMPQPAILKPRAL 563
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN++R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 564 WTGKQIFSLIIPGHINVIRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCKKSL 623
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 624 GTSAGSL 630
[187][TOP]
>UniRef100_UPI00016E658E UPI00016E658E related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E658E
Length = 1628
Score = 152 bits (385), Expect = 8e-36
Identities = 76/127 (59%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+++ MN LM+ +DGK+P PAILKPR L
Sbjct: 524 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLDRGEVMNLLMFLSTWDGKMPQPAILKPRAL 583
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN++R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 584 WTGKQIFSLIIPGHINVIRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCKKSL 643
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 644 GTSAGSL 650
[188][TOP]
>UniRef100_Q4SF83 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon
nigroviridis RepID=Q4SF83_TETNG
Length = 1745
Score = 152 bits (385), Expect = 8e-36
Identities = 76/127 (59%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+++ MN LM+ +DGK+P PAILKPR L
Sbjct: 394 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLDRGEVMNLLMFLSTWDGKMPQPAILKPRAL 453
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP IN++R + H D E I+PGDT+V +E GEL+ G LCKK+L
Sbjct: 454 WTGKQIFSLIIPGHINVIRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCKKSL 513
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 514 GTSAGSL 520
[189][TOP]
>UniRef100_Q30BD8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cyanophora paradoxa
RepID=Q30BD8_CYAPA
Length = 1000
Score = 152 bits (385), Expect = 8e-36
Identities = 77/125 (61%), Positives = 99/125 (79%), Gaps = 2/125 (1%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILK-PR- 175
VSPQ+NRPVMGIVQDTL+ +K+T RDTFIEKDV MN +M + FDG++P PAI+K P+
Sbjct: 426 VSPQSNRPVMGIVQDTLMASQKMTLRDTFIEKDVIMNIVMHLDSFDGRLPIPAIVKSPKG 485
Query: 176 PLWTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGT 355
P WTGKQ+F+ +P +N++R+ + H D E+ I+PGDTQVRIE GELL G +CK+TLGT
Sbjct: 486 PRWTGKQLFSTFLP-NVNVVRFHSTHPDGESTDISPGDTQVRIENGELLCGIVCKRTLGT 544
Query: 356 SNGSL 370
S GSL
Sbjct: 545 SAGSL 549
[190][TOP]
>UniRef100_Q2PYT0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Physoderma maydis
RepID=Q2PYT0_9FUNG
Length = 748
Score = 152 bits (385), Expect = 8e-36
Identities = 71/123 (57%), Positives = 93/123 (75%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQAN+P MGIVQDTL G RK TKRDTF+ K + MN L+W ++DG +P PAI KP+PL
Sbjct: 441 VSPQANKPCMGIVQDTLCGIRKFTKRDTFLSKSLVMNILLWVPNWDGVIPPPAIFKPKPL 500
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +LIIP + N + + + H D E I+PGDT+V IE G LLAG +CK+T+G+S+
Sbjct: 501 WTGKQILSLIIPPRTNCITHHSTHPDNERTDISPGDTKVIIEDGCLLAGIVCKRTVGSSS 560
Query: 362 GSL 370
G +
Sbjct: 561 GGV 563
[191][TOP]
>UniRef100_Q2PYR8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glomus mosseae
RepID=Q2PYR8_GLOMO
Length = 585
Score = 152 bits (384), Expect = 1e-35
Identities = 77/125 (61%), Positives = 93/125 (74%), Gaps = 2/125 (1%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL RK TKRD F KD+ MN LMW +D+DGK+P P ILKP PL
Sbjct: 277 VSPQSNKPVMGIVQDTLCAIRKFTKRDCFXSKDLVMNILMWVKDWDGKIPIPCILKPIPL 336
Query: 182 WTGKQVFNLIIPKQINL--LRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGT 355
WTGKQ+ ++IIPK IN LR+S H D E ++PGDT+V IE GELL G +CKKT+GT
Sbjct: 337 WTGKQILSMIIPKGINSDNLRHST-HPDGENTDMSPGDTKVLIEDGELLCGIVCKKTVGT 395
Query: 356 SNGSL 370
+ L
Sbjct: 396 AQQGL 400
[192][TOP]
>UniRef100_Q6JU17 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neogonodactylus
oerstedii RepID=Q6JU17_9CRUS
Length = 624
Score = 152 bits (383), Expect = 1e-35
Identities = 73/127 (57%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL RK+TKRD F+EK M LM+ +DG++P PAILKP+P
Sbjct: 165 ITPQANKPVMGIVQDTLTAVRKMTKRDVFLEKHEMMTLLMFLPIWDGRMPQPAILKPKPY 224
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +NL++ + H D E +I+PGDT+V +E GEL+ G LCKKTL
Sbjct: 225 WTGKQIFSLIIPGNLNLIKTHSTHPDDEDDGPYRWISPGDTKVLVEHGELIMGILCKKTL 284
Query: 350 GTSNGSL 370
G+S+GSL
Sbjct: 285 GSSSGSL 291
[193][TOP]
>UniRef100_Q2N134 DNA-directed RNA polymerase (Fragment) n=1 Tax=Leucosolenia sp.
AR-2003 RepID=Q2N134_9METZ
Length = 363
Score = 152 bits (383), Expect = 1e-35
Identities = 73/127 (57%), Positives = 95/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK+TKRD FI+++ M LMW +++GK+P PAILKPRPL
Sbjct: 52 VTPQSNRPVMGIVQDTLTAVRKMTKRDVFIDRENVMQLLMWIPEWNGKIPQPAILKPRPL 111
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+L+IP +N ++Y + H D E I+ DT+V I+ GEL+ G LCKK+L
Sbjct: 112 WTGKQLFSLVIPGNVNCVQYHSAHPDEEDDSPYKHISVSDTKVLIDNGELICGILCKKSL 171
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 172 GTSGGSL 178
[194][TOP]
>UniRef100_Q25203 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ilyanassa obsoleta
RepID=Q25203_9CAEN
Length = 1343
Score = 152 bits (383), Expect = 1e-35
Identities = 73/127 (57%), Positives = 97/127 (76%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQANRPVMGIVQDTL RK+TKRD F+ + M+ LM+ +DG++P PAI+KP PL
Sbjct: 440 ITPQANRPVMGIVQDTLTAVRKMTKRDVFLTRAQMMHLLMFLPTWDGRMPQPAIIKPEPL 499
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+L+IP ++N++R + H D E +I+PGDT+V IE GEL++G LCKKTL
Sbjct: 500 WTGKQIFSLVIPGRVNVIRTHSTHPDGEDSGPYKWISPGDTKVLIEDGELISGILCKKTL 559
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 560 GTSAGSL 566
[195][TOP]
>UniRef100_Q2PYT2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Allomyces arbuscula
RepID=Q2PYT2_ALLAR
Length = 739
Score = 152 bits (383), Expect = 1e-35
Identities = 70/123 (56%), Positives = 96/123 (78%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
+SPQ+N+PVMGIVQDTL G K T+RDTF++K++ MN LMW ++D VP PAI+KP+PL
Sbjct: 432 ISPQSNKPVMGIVQDTLCGITKFTRRDTFMDKNMVMNLLMWVPNWDRNVPPPAIMKPKPL 491
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +L+IPK +N + + + H D E+ I+PGDT+V +E GELLAG +CKKT+G +
Sbjct: 492 WTGKQILSLVIPK-VNCITHHSTHPDDESTDISPGDTRVIVEDGELLAGIVCKKTVGAAA 550
Query: 362 GSL 370
G L
Sbjct: 551 GGL 553
[196][TOP]
>UniRef100_Q23699 DNA-directed RNA polymerase (Fragment) n=1 Tax=Crassostrea gigas
RepID=Q23699_CRAGI
Length = 1340
Score = 151 bits (381), Expect = 2e-35
Identities = 75/127 (59%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQANRPVMGIVQDTL RK+TKRD F+++ MN LM+ +DG VP PAILKP+PL
Sbjct: 437 ITPQANRPVMGIVQDTLTAVRKMTKRDVFLDRGQVMNLLMFLPRWDGHVPQPAILKPKPL 496
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTET----GFITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+L+IP + N +R + H D E +I+PGDT+V IE G L++G LCKKTL
Sbjct: 497 WTGKQLFSLVIPGRTNCIRTHSTHPDEEDKGPYKWISPGDTKVLIEDGMLISGILCKKTL 556
Query: 350 GTSNGSL 370
GTS+GSL
Sbjct: 557 GTSSGSL 563
[197][TOP]
>UniRef100_A6GVF8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glomus mosseae
RepID=A6GVF8_GLOMO
Length = 496
Score = 151 bits (381), Expect = 2e-35
Identities = 76/125 (60%), Positives = 93/125 (74%), Gaps = 2/125 (1%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL RK TKRD F+ KD+ N LMW +D+DGK+P P ILKP PL
Sbjct: 268 VSPQSNKPVMGIVQDTLCAIRKFTKRDCFLSKDLVTNILMWVKDWDGKIPIPCILKPIPL 327
Query: 182 WTGKQVFNLIIPKQINL--LRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGT 355
WTGKQ+ ++IIPK IN LR+S H D E ++PGDT+V IE GELL G +CKKT+GT
Sbjct: 328 WTGKQILSMIIPKGINSDNLRHST-HPDGENTDMSPGDTKVLIEDGELLCGIVCKKTVGT 386
Query: 356 SNGSL 370
+ L
Sbjct: 387 AQQGL 391
[198][TOP]
>UniRef100_O09451 DNA-directed RNA polymerase (Fragment) n=1 Tax=Bonnemaisonia
hamifera RepID=O09451_9FLOR
Length = 1732
Score = 150 bits (379), Expect = 4e-35
Identities = 72/123 (58%), Positives = 94/123 (76%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ N+PVMGIVQDTLLGC T+RDTF+E+D+ MN LM D+DG +P PAI KPRPL
Sbjct: 420 VSPQGNKPVMGIVQDTLLGCMLFTQRDTFLERDLMMNLLMHVGDWDGVIPKPAIYKPRPL 479
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVF+LI+P +N++R++ H D E I+PGDT+V I RG+L+ G + K+T+G+S
Sbjct: 480 WTGKQVFSLILP-PVNIIRFNITHPDDEKTDISPGDTKVYISRGQLICGIVDKRTVGSSA 538
Query: 362 GSL 370
L
Sbjct: 539 NGL 541
[199][TOP]
>UniRef100_Q9U5F6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Eptatretus burgeri
RepID=Q9U5F6_EPTBU
Length = 595
Score = 150 bits (379), Expect = 4e-35
Identities = 75/127 (59%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+++ MN LM ++GK+P PAILKP+PL
Sbjct: 25 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLDRGTVMNLLMCLSTWNGKMPQPAILKPQPL 84
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQVF+LIIP +IN +R + H D E I+PGDT+V +E GEL+ G LCK++L
Sbjct: 85 WTGKQVFSLIIPGRINCIRTHSTHPDNEDAGPYKHISPGDTKVVVEDGELIMGILCKRSL 144
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 145 GTSAGSL 151
[200][TOP]
>UniRef100_A0AAR2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Geosiphon pyriformis
RepID=A0AAR2_9GLOM
Length = 649
Score = 150 bits (379), Expect = 4e-35
Identities = 69/123 (56%), Positives = 91/123 (73%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL RK TKRD F+ +D+ MN LMW ++DG++P P I+KP P+
Sbjct: 283 VSPQSNKPVMGIVQDTLCAVRKFTKRDCFLSRDLVMNILMWVPEWDGRIPRPCIIKPIPM 342
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +LIIPK IN + + H + E I+PGDT+V IE G++L G +CKKT+GTS
Sbjct: 343 WTGKQILSLIIPKGINCDGFHSGHPENEKSDISPGDTKVLIEDGQVLCGIICKKTVGTSQ 402
Query: 362 GSL 370
L
Sbjct: 403 QGL 405
[201][TOP]
>UniRef100_Q2PYS3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cladochytrium
replicatum RepID=Q2PYS3_9FUNG
Length = 981
Score = 150 bits (378), Expect = 5e-35
Identities = 70/123 (56%), Positives = 93/123 (75%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ N PVMGIVQDTL G RK+T+RD F+ D+ N LMW ++DG VP PAILKP PL
Sbjct: 417 VSPQKNAPVMGIVQDTLCGIRKLTRRDCFLTMDLMKNILMWVPNWDGVVPMPAILKPVPL 476
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ +L++PK +N++ + + H D E ++PGDT+V+IE GELL G LCK+T+G+S+
Sbjct: 477 WTGKQAISLVLPK-VNMIGFHSQHPDGEHTLVSPGDTRVQIEEGELLMGILCKQTVGSSS 535
Query: 362 GSL 370
G +
Sbjct: 536 GGI 538
[202][TOP]
>UniRef100_Q9PTX4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Lethenteron
reissneri RepID=Q9PTX4_LAMRE
Length = 595
Score = 149 bits (377), Expect = 7e-35
Identities = 74/127 (58%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQ+NRPVMGIVQDTL RK TKRD F+++ M LM+ ++GK+P PA+LKP+PL
Sbjct: 25 ITPQSNRPVMGIVQDTLTAVRKFTKRDVFLDRAEVMTLLMYLSTWNGKMPQPAVLKPQPL 84
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTE-TG---FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQVF+L+IP QIN +R + H D E TG I+PGDT+V +E GEL+ G LCK++L
Sbjct: 85 WTGKQVFSLVIPGQINCVRTHSTHPDNEDTGPYRHISPGDTKVIVENGELIMGILCKRSL 144
Query: 350 GTSNGSL 370
GTS GSL
Sbjct: 145 GTSAGSL 151
[203][TOP]
>UniRef100_Q25151 DNA-directed RNA polymerase (Fragment) n=1 Tax=Helobdella stagnalis
RepID=Q25151_9ANNE
Length = 1337
Score = 149 bits (377), Expect = 7e-35
Identities = 74/127 (58%), Positives = 97/127 (76%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQANRPVMGIVQD+L K+T+RDTFI KD MN LM+ + GK+P PAILKPR L
Sbjct: 433 ITPQANRPVMGIVQDSLTAVNKMTRRDTFITKDEIMNILMYLPGWAGKLPQPAILKPRAL 492
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTET----GFITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F++IIP +IN++R + H D E +I+PGDT+V +E G+LL+G LCKK+L
Sbjct: 493 WTGKQLFSIIIPGRINVIRTHSTHPDDEDRGPHKWISPGDTKVLVEDGKLLSGILCKKSL 552
Query: 350 GTSNGSL 370
G S+GSL
Sbjct: 553 GASSGSL 559
[204][TOP]
>UniRef100_Q2PYQ4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Orphella haysii
RepID=Q2PYQ4_9FUNG
Length = 750
Score = 149 bits (377), Expect = 7e-35
Identities = 69/123 (56%), Positives = 92/123 (74%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL RK TKRD F+E D+ MN LM ++DG VP P I+KP+ L
Sbjct: 455 VSPQSNKPVMGIVQDTLAAIRKFTKRDCFLEADLVMNLLMTLPEWDGIVPPPCIMKPKML 514
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+++L+IPK N R+ + H D E + +PGDT+V IE G++LAG +CK+T+G+S
Sbjct: 515 WTGKQIYSLVIPKGTNCYRFHSTHPDEENTWCSPGDTRVIIENGQVLAGIICKRTVGSSE 574
Query: 362 GSL 370
G L
Sbjct: 575 GGL 577
[205][TOP]
>UniRef100_C6YYS1 DNA-directed RNA polymerase (Fragment) n=29 Tax=Panurginae
RepID=C6YYS1_9HYME
Length = 286
Score = 149 bits (376), Expect = 9e-35
Identities = 73/120 (60%), Positives = 90/120 (75%), Gaps = 4/120 (3%)
Frame = +2
Query: 23 PVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPLWTGKQVF 202
PVMGIVQDTL RK+TKRD FIEK+ MN LM+ +DGK+P P ILKP+PLWTGKQ+F
Sbjct: 2 PVMGIVQDTLTAVRKMTKRDVFIEKEQMMNILMFLPSWDGKMPQPCILKPKPLWTGKQIF 61
Query: 203 NLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTLGTSNGSL 370
+LIIP +N++R + H D E +I+PGDT+V +E GEL+ G LCKKTLGTS GSL
Sbjct: 62 SLIIPGNVNMIRTHSTHPDDEDDGPYKWISPGDTKVMVEHGELVMGILCKKTLGTSAGSL 121
[206][TOP]
>UniRef100_Q9C428 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monoblepharis
macrandra RepID=Q9C428_9FUNG
Length = 1603
Score = 149 bits (376), Expect = 9e-35
Identities = 72/123 (58%), Positives = 94/123 (76%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
+SP+ N+PVMGIVQDTL G RK T RD F+ +D+ MN LMW ED+DG +P PAI+KP PL
Sbjct: 448 ISPKHNQPVMGIVQDTLCGIRKFTIRDNFLSRDMVMNILMWVEDWDGVIPLPAIVKPVPL 507
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +L IP INL+ +SA H D E G ++ GDT+V IE G +L+GT+CKKT+G+S
Sbjct: 508 WTGKQMMSLAIP-DINLVGFSATHPDDEKGDMSVGDTKVIIEGGTILSGTMCKKTVGSSA 566
Query: 362 GSL 370
G +
Sbjct: 567 GGV 569
[207][TOP]
>UniRef100_Q2PYS8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rozella allomycis
RepID=Q2PYS8_9FUNG
Length = 809
Score = 149 bits (376), Expect = 9e-35
Identities = 67/123 (54%), Positives = 93/123 (75%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+P MGIVQDTL G RK T+R++F+ K + MN +MW ++GK+P P ILKP PL
Sbjct: 243 VSPQSNKPCMGIVQDTLCGVRKFTRRESFLNKAMVMNIVMWLPSWEGKLPRPCILKPVPL 302
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
W+GKQ+F++IIPK +N + + + H D E I+PGDT+V IE GEL++G +CKKT+G +
Sbjct: 303 WSGKQIFSMIIPKGVNCVTFHSTHPDNEYSDISPGDTKVLIEDGELISGIVCKKTVGPAA 362
Query: 362 GSL 370
G L
Sbjct: 363 GGL 365
[208][TOP]
>UniRef100_P16356 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
elegans RepID=RPB1_CAEEL
Length = 1852
Score = 149 bits (376), Expect = 9e-35
Identities = 74/127 (58%), Positives = 95/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL R +TKRD FI+ M+ LM+ +DGKVP PAILKP+PL
Sbjct: 516 ITPQANKPVMGIVQDTLCAVRMMTKRDVFIDWPFMMDLLMYLPTWDGKVPQPAILKPKPL 575
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQVF+LIIP +N+LR + H D+E +I+PGDT+V IE GELL+G +C KT+
Sbjct: 576 WTGKQVFSLIIPGNVNVLRTHSTHPDSEDSGPYKWISPGDTKVIIEHGELLSGIVCSKTV 635
Query: 350 GTSNGSL 370
G S G+L
Sbjct: 636 GKSAGNL 642
[209][TOP]
>UniRef100_P35074 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
briggsae RepID=RPB1_CAEBR
Length = 1853
Score = 149 bits (376), Expect = 9e-35
Identities = 74/127 (58%), Positives = 95/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL R +TKRD FI+ M+ LM+ +DGKVP PAILKP+PL
Sbjct: 520 ITPQANKPVMGIVQDTLCAVRMMTKRDIFIDWPFMMDLLMYLPTWDGKVPQPAILKPKPL 579
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQVF+LIIP +N+LR + H D+E +I+PGDT+V IE GELL+G +C KT+
Sbjct: 580 WTGKQVFSLIIPGNVNVLRTHSTHPDSEDSGPYKWISPGDTKVLIEHGELLSGIVCSKTV 639
Query: 350 GTSNGSL 370
G S G+L
Sbjct: 640 GKSAGNL 646
[210][TOP]
>UniRef100_Q2PYQ6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Scutellospora
heterogama RepID=Q2PYQ6_9GLOM
Length = 639
Score = 148 bits (374), Expect = 2e-34
Identities = 75/125 (60%), Positives = 93/125 (74%), Gaps = 2/125 (1%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL RK TKRD F+ KD+ MN LMW D+DG++P P ILKP PL
Sbjct: 278 VSPQSNKPVMGIVQDTLCAVRKFTKRDCFLTKDLVMNILMWVLDWDGRLPIPCILKPIPL 337
Query: 182 WTGKQVFNLIIPKQINL--LRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGT 355
WTGKQ+ ++IIPK IN LR+S H + E I+PGDT+V IE GELL G +CKKT+G
Sbjct: 338 WTGKQILSMIIPKGINSDNLRHSG-HPENEHSDISPGDTKVLIEDGELLCGIVCKKTVGA 396
Query: 356 SNGSL 370
++ L
Sbjct: 397 THQGL 401
[211][TOP]
>UniRef100_A1YIB8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Gigaspora gigantea
RepID=A1YIB8_9GLOM
Length = 1039
Score = 148 bits (374), Expect = 2e-34
Identities = 75/125 (60%), Positives = 93/125 (74%), Gaps = 2/125 (1%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N+PVMGIVQDTL RK TKRD F+ KD+ MN LMW D+DG++P P ILKP PL
Sbjct: 457 VSPQSNKPVMGIVQDTLCAVRKFTKRDCFLTKDLVMNILMWVLDWDGRLPIPCILKPIPL 516
Query: 182 WTGKQVFNLIIPKQINL--LRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGT 355
WTGKQ+ ++IIPK IN LR+S H + E I+PGDT+V IE GELL G +CKKT+G
Sbjct: 517 WTGKQILSMIIPKGINSDNLRHSG-HPENEHSDISPGDTKVLIEDGELLCGIVCKKTVGA 575
Query: 356 SNGSL 370
++ L
Sbjct: 576 THQGL 580
[212][TOP]
>UniRef100_Q9NJJ0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tanystylum
orbiculare RepID=Q9NJJ0_9CHEL
Length = 624
Score = 148 bits (373), Expect = 2e-34
Identities = 71/127 (55%), Positives = 95/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL+ RK+TKRD F+E+D M LM+ +DG++ PAILKP+PL
Sbjct: 165 ITPQANKPVMGIVQDTLMAVRKMTKRDVFLERDQMMTLLMFLPTWDGRMMQPAILKPKPL 224
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP +N +R + H D E +I+PGDT+V IE G LL+G +CK+T+
Sbjct: 225 WTGKQLFSLIIPGTVNCIRTHSTHPDDEDDGPYKWISPGDTKVLIEHGHLLSGIICKRTV 284
Query: 350 GTSNGSL 370
G S GSL
Sbjct: 285 GPSGGSL 291
[213][TOP]
>UniRef100_A8PU11 DNA-directed RNA polymerase n=1 Tax=Brugia malayi
RepID=A8PU11_BRUMA
Length = 1943
Score = 148 bits (373), Expect = 2e-34
Identities = 74/127 (58%), Positives = 93/127 (73%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQAN+PVMGIVQDTL R +TKRD FIE M+ LM ++DGKVP PAILKP+PL
Sbjct: 591 ITPQANKPVMGIVQDTLTAVRMMTKRDVFIELPRMMDLLMQMPNWDGKVPQPAILKPKPL 650
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQVF LIIP +N+LR + H D E +I+PGDT+V IE GELL+G +C +T+
Sbjct: 651 WTGKQVFTLIIPGNVNVLRTHSTHPDDEDNGPYKWISPGDTKVIIEHGELLSGIICSRTI 710
Query: 350 GTSNGSL 370
G S G+L
Sbjct: 711 GRSAGNL 717
[214][TOP]
>UniRef100_Q2PYS6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Polychytrium
aggregatum RepID=Q2PYS6_9FUNG
Length = 1016
Score = 147 bits (371), Expect = 4e-34
Identities = 72/123 (58%), Positives = 88/123 (71%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ N P MGIVQDTL RK T+RD F+ KD+ MN LMW D+DG VP P I+KP PL
Sbjct: 449 VTPQKNGPCMGIVQDTLCAIRKFTRRDCFLSKDMVMNLLMWVPDWDGTVPTPCIIKPIPL 508
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +LIIP+ IN++ Y H D E I+PGDT+V IE GELL G LCKKT+G+S
Sbjct: 509 WTGKQMMSLIIPR-INMVGYHMAHPDDEKSDISPGDTKVYIEDGELLTGILCKKTVGSSQ 567
Query: 362 GSL 370
+
Sbjct: 568 NGI 570
[215][TOP]
>UniRef100_Q9NJK7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nebalia hessleri
RepID=Q9NJK7_9CRUS
Length = 624
Score = 146 bits (369), Expect = 6e-34
Identities = 69/127 (54%), Positives = 95/127 (74%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQ+N+PVMGIVQDTL RK+TKRD F+E MN LM+ +DGK+P PAILKP+PL
Sbjct: 165 ITPQSNKPVMGIVQDTLTAVRKMTKRDVFLEMHEMMNCLMFLPIWDGKMPQPAILKPKPL 224
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F +IIP +N+++ + H D E +I+PGDT+V +E G+L+ G +CKK+L
Sbjct: 225 WTGKQLFTMIIPGNLNMVKTHSTHPDDEDDGPYKWISPGDTKVLVEHGDLVMGIICKKSL 284
Query: 350 GTSNGSL 370
G S+GSL
Sbjct: 285 GASSGSL 291
[216][TOP]
>UniRef100_Q2N1B6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Platynereis
dumerilii RepID=Q2N1B6_PLADU
Length = 363
Score = 146 bits (369), Expect = 6e-34
Identities = 69/127 (54%), Positives = 97/127 (76%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQ+NRPVMGIVQDTL RK+TKRD F++K M+ L+ E +DG++P PA+LKPRPL
Sbjct: 52 ITPQSNRPVMGIVQDTLCAVRKMTKRDVFLDKSEMMSLLLHLEKWDGRLPQPAVLKPRPL 111
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTET----GFITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+LIIP ++N +R + H D+E +I+ GDT+V +E GEL+ G +CKK++
Sbjct: 112 WTGKQLFSLIIPGRVNCIRTHSTHPDSEDKGPYKWISVGDTKVIVEDGELVCGIICKKSI 171
Query: 350 GTSNGSL 370
G S+GSL
Sbjct: 172 GASSGSL 178
[217][TOP]
>UniRef100_Q2PYQ9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Endogone pisiformis
RepID=Q2PYQ9_9FUNG
Length = 845
Score = 146 bits (369), Expect = 6e-34
Identities = 65/123 (52%), Positives = 95/123 (77%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N PVMGIVQDTL G RK TKRD F+ K++ MN +++ +DG++PA AILKP+P+
Sbjct: 277 VSPQSNXPVMGIVQDTLCGIRKFTKRDCFLTKEMVMNIVLYVPAWDGQIPAXAILKPKPM 336
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +++IP+ IN + + H + E +++PGDT+V IE G+L+ G +CKKT+GT++
Sbjct: 337 WTGKQIVSMVIPEXINCDTFHSSHPEAENTWMSPGDTRVHIEDGDLICGIVCKKTVGTAD 396
Query: 362 GSL 370
G L
Sbjct: 397 GGL 399
[218][TOP]
>UniRef100_UPI0000E48673 PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 1 n=1 Tax=Strongylocentrotus
purpuratus RepID=UPI0000E48673
Length = 1880
Score = 145 bits (367), Expect = 1e-33
Identities = 68/127 (53%), Positives = 93/127 (73%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQ+NRPVMGIVQD+L RK TKRD F+ K MN L++ ++DGK+P PAILKPRPL
Sbjct: 520 ITPQSNRPVMGIVQDSLCAIRKFTKRDVFVTKPNVMNLLLFLPNWDGKIPKPAILKPRPL 579
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTET----GFITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+ L+IP +N++R+ + H D E +++PGDT+V I GEL+ G +CKKT+
Sbjct: 580 WTGKQLLTLVIPDNVNVVRFHSTHPDGEDRGPYKWLSPGDTKVYIVNGELITGIVCKKTV 639
Query: 350 GTSNGSL 370
G S G+L
Sbjct: 640 GASGGTL 646
[219][TOP]
>UniRef100_UPI0000E48672 PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 2 n=1 Tax=Strongylocentrotus
purpuratus RepID=UPI0000E48672
Length = 1913
Score = 145 bits (367), Expect = 1e-33
Identities = 68/127 (53%), Positives = 93/127 (73%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQ+NRPVMGIVQD+L RK TKRD F+ K MN L++ ++DGK+P PAILKPRPL
Sbjct: 526 ITPQSNRPVMGIVQDSLCAIRKFTKRDVFVTKPNVMNLLLFLPNWDGKIPKPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTET----GFITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+ L+IP +N++R+ + H D E +++PGDT+V I GEL+ G +CKKT+
Sbjct: 586 WTGKQLLTLVIPDNVNVVRFHSTHPDGEDRGPYKWLSPGDTKVYIVNGELITGIVCKKTV 645
Query: 350 GTSNGSL 370
G S G+L
Sbjct: 646 GASGGTL 652
[220][TOP]
>UniRef100_UPI0000E48671 PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) isoform 3 n=1 Tax=Strongylocentrotus
purpuratus RepID=UPI0000E48671
Length = 1921
Score = 145 bits (367), Expect = 1e-33
Identities = 68/127 (53%), Positives = 93/127 (73%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQ+NRPVMGIVQD+L RK TKRD F+ K MN L++ ++DGK+P PAILKPRPL
Sbjct: 526 ITPQSNRPVMGIVQDSLCAIRKFTKRDVFVTKPNVMNLLLFLPNWDGKIPKPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTET----GFITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+ L+IP +N++R+ + H D E +++PGDT+V I GEL+ G +CKKT+
Sbjct: 586 WTGKQLLTLVIPDNVNVVRFHSTHPDGEDRGPYKWLSPGDTKVYIVNGELITGIVCKKTV 645
Query: 350 GTSNGSL 370
G S G+L
Sbjct: 646 GASGGTL 652
[221][TOP]
>UniRef100_Q2N163 DNA-directed RNA polymerase (Fragment) n=1 Tax=Suberites fuscus
RepID=Q2N163_9METZ
Length = 363
Score = 145 bits (366), Expect = 1e-33
Identities = 71/127 (55%), Positives = 92/127 (72%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQ+NRPVMGIVQD+L K+TKRD F+ K+ MN LMW +DGK+P PAILKP+PL
Sbjct: 52 LTPQSNRPVMGIVQDSLTAATKMTKRDVFLGKEDVMNLLMWLPAWDGKMPQPAILKPKPL 111
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F L IP IN++R + H D E +I+PGDT+V +E GEL++G L K TL
Sbjct: 112 WTGKQMFTLTIPGNINVVRTHSTHPDEEDDGPYRYISPGDTKVLVEHGELISGILSKDTL 171
Query: 350 GTSNGSL 370
G +GSL
Sbjct: 172 GPKSGSL 178
[222][TOP]
>UniRef100_Q2N109 DNA-directed RNA polymerase (Fragment) n=1 Tax=Aphrocallistes
vastus RepID=Q2N109_9METZ
Length = 365
Score = 145 bits (366), Expect = 1e-33
Identities = 68/127 (53%), Positives = 92/127 (72%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
+SPQ+N+PVMGIVQDTL K+TKRD FIE+D MN LMW+ ++DG++P PAI+KP+P+
Sbjct: 54 ISPQSNKPVMGIVQDTLTAVCKMTKRDVFIERDDMMNLLMWYPEWDGRMPQPAIIKPKPM 113
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGF----ITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+L+IP +N + H D E I+ GDT+V IE EL++G +CKKT+
Sbjct: 114 WTGKQLFSLVIPGNVNCTNTCSTHPDEEDNTPSRNISVGDTRVLIENSELISGIICKKTV 173
Query: 350 GTSNGSL 370
G S SL
Sbjct: 174 GRSGSSL 180
[223][TOP]
>UniRef100_A7S8F9 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
RepID=A7S8F9_NEMVE
Length = 1929
Score = 145 bits (365), Expect = 2e-33
Identities = 73/127 (57%), Positives = 90/127 (70%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+N+PVMGIVQD+L RK TKRD FIEKD MN LMW +DGK+P PAILKPRPL
Sbjct: 531 VTPQSNKPVMGIVQDSLTAVRKFTKRDVFIEKDAMMNLLMWIPTWDGKIPQPAILKPRPL 590
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+ ++IIP +N++R + H D E I+PGDT+ RI LCKK+L
Sbjct: 591 WTGKQICSMIIPGNVNVIRTHSTHPDDEDSGPYKHISPGDTKARI---------LCKKSL 641
Query: 350 GTSNGSL 370
GTS+GSL
Sbjct: 642 GTSSGSL 648
[224][TOP]
>UniRef100_Q2PYS4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Spizellomyces
punctatus RepID=Q2PYS4_SPIPN
Length = 792
Score = 144 bits (364), Expect = 2e-33
Identities = 73/120 (60%), Positives = 87/120 (72%), Gaps = 1/120 (0%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ N PVMGIVQDTL G RK TKRDTF+ +D MN LMW D+DG VP PAILKP PL
Sbjct: 441 VSPQKNAPVMGIVQDTLCGIRKFTKRDTFLRRDFVMNLLMWVPDWDGTVPQPAILKPVPL 500
Query: 182 WTGKQVFNLIIPKQINLLRY-SAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTS 358
WTGKQ+ +L+IP +IN+ Y SA+ T+ + D +V IE GELL G LCKKT+G+S
Sbjct: 501 WTGKQIMSLVIPPKINVTGYHSAFDEQTDKDDGSSSDCKVLIENGELLTGILCKKTVGSS 560
[225][TOP]
>UniRef100_Q2PYQ2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monoblepharella sp.
M15 RepID=Q2PYQ2_9FUNG
Length = 547
Score = 144 bits (363), Expect = 3e-33
Identities = 69/123 (56%), Positives = 93/123 (75%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
+SP+ N+PVMGIVQDTL G RK T RD F+ +D+ MN LMW + +DG VPAPAI+KP PL
Sbjct: 241 ISPKHNQPVMGIVQDTLCGIRKFTLRDNFMTRDMVMNILMWVDGWDGVVPAPAIIKPTPL 300
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ + IIP +NL+ ++A H D E G ++ DT+V IE G ++AG LCKKT+G+S+
Sbjct: 301 WTGKQLLSXIIP-DVNLVGFAATHPDDERGDMSLADTKVIIEGGNIVAGILCKKTVGSSS 359
Query: 362 GSL 370
G +
Sbjct: 360 GGV 362
[226][TOP]
>UniRef100_A1YIB4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Furculomyces
boomerangus RepID=A1YIB4_9FUNG
Length = 1024
Score = 144 bits (363), Expect = 3e-33
Identities = 67/123 (54%), Positives = 89/123 (72%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N PVMGIVQDTL TKRDT ++ D MN LM D+DG VP P ILKP+PL
Sbjct: 451 VSPQSNMPVMGIVQDTLCAINIFTKRDTLLQYDFVMNLLMTIPDWDGIVPTPCILKPQPL 510
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
W+GKQ+++++IPK +N RY++ H D E + +PGDT++ IE GELL+G LCK+T+G +
Sbjct: 511 WSGKQIYSMVIPKGVNCHRYNSTHPDNEYTWCSPGDTRIIIENGELLSGALCKRTVGAVD 570
Query: 362 GSL 370
L
Sbjct: 571 SGL 573
[227][TOP]
>UniRef100_UPI00019270E9 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 2 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270E9
Length = 2014
Score = 143 bits (361), Expect = 5e-33
Identities = 70/127 (55%), Positives = 90/127 (70%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQ+N+P MGIVQD+L K TKRD F+EKDV MN L+W +DGK P PAILKP+PL
Sbjct: 524 ITPQSNKPCMGIVQDSLCAVYKFTKRDVFLEKDVVMNLLLWIRKWDGKFPIPAILKPKPL 583
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+L+IP IN + H D E+ I+PGDT+V IE G L++G +CKKT+
Sbjct: 584 WTGKQIFSLLIPPGINHSGEHSAHPDDESNGPYCHISPGDTKVLIEDGTLISGIICKKTV 643
Query: 350 GTSNGSL 370
G S SL
Sbjct: 644 GPSGNSL 650
[228][TOP]
>UniRef100_UPI00019270BB PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 1 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270BB
Length = 2041
Score = 143 bits (361), Expect = 5e-33
Identities = 70/127 (55%), Positives = 90/127 (70%), Gaps = 4/127 (3%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
++PQ+N+P MGIVQD+L K TKRD F+EKDV MN L+W +DGK P PAILKP+PL
Sbjct: 524 ITPQSNKPCMGIVQDSLCAVYKFTKRDVFLEKDVVMNLLLWIRKWDGKFPIPAILKPKPL 583
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTL 349
WTGKQ+F+L+IP IN + H D E+ I+PGDT+V IE G L++G +CKKT+
Sbjct: 584 WTGKQIFSLLIPPGINHSGEHSAHPDDESNGPYCHISPGDTKVLIEDGTLISGIICKKTV 643
Query: 350 GTSNGSL 370
G S SL
Sbjct: 644 GPSGNSL 650
[229][TOP]
>UniRef100_UPI00005A0B19 PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide A isoform 5 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B19
Length = 1693
Score = 143 bits (361), Expect = 5e-33
Identities = 73/123 (59%), Positives = 86/123 (69%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+PQ+NRPVMGIVQDTL RK TKRD F+E+ MN LM+ +DGKVP PAILKPRPL
Sbjct: 526 VTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPL 585
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+F+LIIP IN +R + H D E +E GEL+ G LCKK+LGTS
Sbjct: 586 WTGKQIFSLIIPGHINCIRTHSTHPDDEDS----------VENGELIMGILCKKSLGTSA 635
Query: 362 GSL 370
GSL
Sbjct: 636 GSL 638
[230][TOP]
>UniRef100_Q2PYS5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hyaloraphidium
curvatum RepID=Q2PYS5_HYACU
Length = 1002
Score = 143 bits (360), Expect = 7e-33
Identities = 68/123 (55%), Positives = 88/123 (71%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
+SPQAN+PVMGIVQDT G RK T RD + +D+ MN MW D+DG+ P PAILKP+PL
Sbjct: 435 ISPQANKPVMGIVQDTFCGIRKFTLRDNMMTRDMVMNICMWIPDWDGQPPPPAILKPQPL 494
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +++IP +IN+ + H D E I+PGDTQV IE G +LAG L K+T+G S
Sbjct: 495 WTGKQLMSMVIPSRINVTGKHSTHPDDERDNISPGDTQVVIEDGVVLAGILSKRTVGNSA 554
Query: 362 GSL 370
G +
Sbjct: 555 GGI 557
[231][TOP]
>UniRef100_Q76IJ1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Furculomyces
boomerangus RepID=Q76IJ1_9FUNG
Length = 341
Score = 142 bits (358), Expect = 1e-32
Identities = 66/123 (53%), Positives = 89/123 (72%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ+N PVMGIVQDTL TKRDT ++ D M+ LM D+DG VP P ILKP+PL
Sbjct: 24 VSPQSNMPVMGIVQDTLCAINIFTKRDTLLQYDFVMSLLMTIPDWDGIVPTPCILKPQPL 83
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
W+GKQ+++++IPK +N RY++ H D E + +PGDT++ IE GELL+G LCK+T+G +
Sbjct: 84 WSGKQIYSMVIPKGVNCHRYNSTHPDNEYTWCSPGDTRIIIENGELLSGALCKRTVGAVD 143
Query: 362 GSL 370
L
Sbjct: 144 SGL 146
[232][TOP]
>UniRef100_Q2PYS0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Entomophthora muscae
RepID=Q2PYS0_9FUNG
Length = 1007
Score = 142 bits (357), Expect = 1e-32
Identities = 64/123 (52%), Positives = 87/123 (70%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ N+PVMGIVQD+L G RK TKRD F+ K+ N ++W D++G +P P I P PL
Sbjct: 437 VSPQGNKPVMGIVQDSLCGVRKFTKRDCFLSKEFVQNLVLWIPDWNGYIPPPCIQFPVPL 496
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +L+IP IN+ + A H D E +I+PGDT+V I GE++AG +CK+T+G +
Sbjct: 497 WTGKQLLSLLIPTGINMTTFHAAHPDDEKSYISPGDTRVEIVNGEIIAGIICKRTVGAAA 556
Query: 362 GSL 370
G L
Sbjct: 557 GGL 559
[233][TOP]
>UniRef100_C6YYR9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Arhysosage ochracea
RepID=C6YYR9_9HYME
Length = 275
Score = 141 bits (356), Expect = 2e-32
Identities = 70/118 (59%), Positives = 87/118 (73%), Gaps = 4/118 (3%)
Frame = +2
Query: 29 MGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPLWTGKQVFNL 208
M IVQDTL RK+TKRD FIEK+ MN LM+ +DGK+P P ILKP+PLWTGKQ+F+L
Sbjct: 1 MVIVQDTLTAVRKMTKRDVFIEKEQMMNILMFLPSWDGKMPQPCILKPKPLWTGKQIFSL 60
Query: 209 IIPKQINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTLGTSNGSL 370
IIP +N++R + H D E +I+PGDT+V +E GEL+ G LCKKTLGTS GSL
Sbjct: 61 IIPGNVNMIRTHSTHPDDEDDGPYKWISPGDTKVMVEHGELVMGILCKKTLGTSAGSL 118
[234][TOP]
>UniRef100_Q873Q0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhizophlyctis sp.
C-14 RepID=Q873Q0_9FUNG
Length = 334
Score = 141 bits (356), Expect = 2e-32
Identities = 71/123 (57%), Positives = 88/123 (71%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ N PVMGIVQDTL G T+RDTF+ KD+ MN LMW D+DG +P PAILKP PL
Sbjct: 28 VSPQKNGPVMGIVQDTLCGVTMFTQRDTFLRKDMMMNILMWVPDWDGNIPEPAILKPVPL 87
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ LIIP+ IN+ H DTE +I+PGDT+V I+ GEL+ G L K T+G++
Sbjct: 88 WTGKQMMTLIIPR-INMEGKHFGHPDTEKTWISPGDTRVIIQDGELITGILSKGTVGSAA 146
Query: 362 GSL 370
G +
Sbjct: 147 GGI 149
[235][TOP]
>UniRef100_Q2PYS9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhizoclosmatium sp.
JEL347-h RepID=Q2PYS9_9FUNG
Length = 573
Score = 141 bits (355), Expect = 3e-32
Identities = 72/124 (58%), Positives = 89/124 (71%), Gaps = 1/124 (0%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ N P MGIVQDTL G RK TKRD F+ +D+ MN LMW D+DG +P PAILKP PL
Sbjct: 278 VSPQKNAPCMGIVQDTLCGVRKFTKRDNFLPRDLVMNILMWVPDWDGVIPTPAILKPVPL 337
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETG-FITPGDTQVRIERGELLAGTLCKKTLGTS 358
WTGKQ+ +LIIPK IN+ + + H D E ++ GDT+V I+ GE +AG LCKKT+G S
Sbjct: 338 WTGKQMMSLIIPK-INIEGFHSQHPDDEKNPDMSVGDTKVIIQDGEHIAGILCKKTVGNS 396
Query: 359 NGSL 370
G +
Sbjct: 397 GGGI 400
[236][TOP]
>UniRef100_A1YIC4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Chytriomyces
hyalinus RepID=A1YIC4_9FUNG
Length = 1003
Score = 140 bits (354), Expect = 3e-32
Identities = 72/124 (58%), Positives = 88/124 (70%), Gaps = 1/124 (0%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ N P MGIVQD+L G RK TKRD F+ KD MN LMW D+DG VP PAI+KP PL
Sbjct: 432 VSPQKNAPCMGIVQDSLCGVRKFTKRDNFLPKDFVMNILMWVPDWDGVVPTPAIVKPVPL 491
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTE-TGFITPGDTQVRIERGELLAGTLCKKTLGTS 358
WTGKQ+ +LIIPK INL + + H D E ++ GDT+V I+ GE +AG LCKKT+G +
Sbjct: 492 WTGKQMMSLIIPK-INLENFHSQHPDDEPNADVSVGDTKVIIQDGEHIAGILCKKTVGNA 550
Query: 359 NGSL 370
G +
Sbjct: 551 GGGI 554
[237][TOP]
>UniRef100_O04142 DNA-directed RNA polymerase (Fragment) n=1 Tax=Porphyra yezoensis
RepID=O04142_PORYE
Length = 1685
Score = 140 bits (353), Expect = 4e-32
Identities = 68/123 (55%), Positives = 91/123 (73%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ N+PVMGIVQDTLLGC T RDTF+ +DV M+ L+ E +DG +P PAI+KP PL
Sbjct: 438 VSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPL 497
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+F+L++P +NL+RY H D E+ I+PGDT+V I GEL+ G + K+T+G++
Sbjct: 498 WTGKQLFSLLLP-DVNLVRYCNTHPDDESTDISPGDTRVLIVGGELITGIVDKRTVGSAA 556
Query: 362 GSL 370
L
Sbjct: 557 NGL 559
[238][TOP]
>UniRef100_Q76IJ4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Syncephalis depressa
RepID=Q76IJ4_9FUNG
Length = 334
Score = 140 bits (353), Expect = 4e-32
Identities = 64/121 (52%), Positives = 87/121 (71%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ N PVMGIVQDTL G T+RDTF+ + MN LMW ++DG++P PAILKP+PL
Sbjct: 28 VSPQKNAPVMGIVQDTLCGINLFTRRDTFLNQSETMNILMWVPNWDGRIPVPAILKPKPL 87
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
W+GKQ+F+L++PK ++ A + + E ++TP DT+V +E GELL G +CKKT+G
Sbjct: 88 WSGKQIFSLVVPKGVSHTGAHASNPEGEHPYLTPHDTKVLVENGELLTGIICKKTVGVGA 147
Query: 362 G 364
G
Sbjct: 148 G 148
[239][TOP]
>UniRef100_Q2PYR4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhopalomyces elegans
RepID=Q2PYR4_9FUNG
Length = 792
Score = 140 bits (353), Expect = 4e-32
Identities = 67/120 (55%), Positives = 85/120 (70%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ N PVMGIVQDTL G T+RDTF+ + MN LMW ++DG++PAPAILKP+PL
Sbjct: 443 VSPQKNAPVMGIVQDTLCGVNIFTRRDTFLSRQQTMNILMWVPNWDGRIPAPAILKPKPL 502
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ LIIPK ++ + + D E +TP DT+V IE GELL G +CKKT+G +
Sbjct: 503 WTGKQMLTLIIPKGVSYTGAHSGNPDGEHPHLTPNDTKVLIENGELLTGIVCKKTVGVGS 562
[240][TOP]
>UniRef100_Q2PYR3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhizophlyctis rosea
RepID=Q2PYR3_9FUNG
Length = 1006
Score = 140 bits (353), Expect = 4e-32
Identities = 70/123 (56%), Positives = 89/123 (72%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ N PVMGIVQDTL G T+RDTF+ KD+ MN LMW D+DG +P PAILKP PL
Sbjct: 437 VSPQKNGPVMGIVQDTLCGITMFTQRDTFLRKDMMMNILMWVPDWDGNIPEPAILKPVPL 496
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+ +LIIP+ IN+ H D E +++PGDT+V I+ GEL+AG L K T+G++
Sbjct: 497 WTGKQMMSLIIPR-INMEGKHFGHPDAEKTWMSPGDTRVIIQDGELIAGILSKGTVGSAA 555
Query: 362 GSL 370
G +
Sbjct: 556 GGI 558
[241][TOP]
>UniRef100_Q8MX26 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cercomonas sp. ATCC
50319 RepID=Q8MX26_9EUKA
Length = 1014
Score = 139 bits (351), Expect = 7e-32
Identities = 69/123 (56%), Positives = 93/123 (75%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQAN+PV+GIVQDTLLGC K T RD F++K + N LM E++DG VP P ILKP PL
Sbjct: 442 VSPQANKPVIGIVQDTLLGCMKFTYRDNFLDKAMVFNILMHLENWDGTVPIPCILKPVPL 501
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
W+GKQ+F+LIIP+ +N+ R + H D+E ++ DT+VRIE+G+LL G + K+T+G +
Sbjct: 502 WSGKQIFSLIIPR-VNMERKANGHPDSEHTVMSVNDTRVRIEQGQLLMGVVDKQTVGNTP 560
Query: 362 GSL 370
GSL
Sbjct: 561 GSL 563
[242][TOP]
>UniRef100_B4YT34 DNA-directed RNA polymerase (Fragment) n=1 Tax=Sialis sp. ALW-2008
RepID=B4YT34_9NEOP
Length = 555
Score = 139 bits (351), Expect = 7e-32
Identities = 70/114 (61%), Positives = 85/114 (74%), Gaps = 4/114 (3%)
Frame = +2
Query: 41 QDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPK 220
QDTL RK+TKRD FIEK+ MN LM+ +DGK+P PAILKP+PLWTGKQVF+LIIP
Sbjct: 1 QDTLTAVRKMTKRDVFIEKEQMMNILMFLPIWDGKMPQPAILKPKPLWTGKQVFSLIIPG 60
Query: 221 QINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTLGTSNGSL 370
+NL+R + H D E +I+PGDT+V +E GEL+ G LCKKTLGTS GSL
Sbjct: 61 NVNLIRTHSTHPDEEDDGPYKWISPGDTKVMVEHGELIMGILCKKTLGTSAGSL 114
[243][TOP]
>UniRef100_Q76IJ2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Capniomyces
stellatus RepID=Q76IJ2_9FUNG
Length = 341
Score = 139 bits (351), Expect = 7e-32
Identities = 66/123 (53%), Positives = 87/123 (70%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQAN+PVMGIVQDTL TKRDT + D+ M+ L+ +DG +P P ILKP+PL
Sbjct: 24 VSPQANKPVMGIVQDTLCALLMFTKRDTLMRLDMVMSLLLKVPGWDGLIPTPCILKPQPL 83
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
W+GKQ+F+LIIPK IN + H D ET + +PGD++V IE GELL+G +CK+T+G
Sbjct: 84 WSGKQIFSLIIPKGINCYTFFKGHPDNETAWCSPGDSRVVIENGELLSGIICKQTVGAVR 143
Query: 362 GSL 370
G +
Sbjct: 144 GGI 146
[244][TOP]
>UniRef100_O00820 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acanthamoeba
castellanii RepID=O00820_ACACA
Length = 1569
Score = 139 bits (349), Expect = 1e-31
Identities = 73/123 (59%), Positives = 91/123 (73%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
V+ Q+N+PV+GIVQDTLLG +T+RDTFIEKDV MN LMW E +DG VP P ILKP+ L
Sbjct: 441 VTAQSNKPVIGIVQDTLLGGCLLTQRDTFIEKDVMMNILMWLESWDGTVPTPTILKPKQL 500
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQVF+LIIP+ N + +AD E ++ D +V IE GEL++G L KKTLGTS+
Sbjct: 501 WTGKQVFSLIIPRNTNFV-----NADDEEPDMSFTDNKVLIEEGELVSGILNKKTLGTSH 555
Query: 362 GSL 370
SL
Sbjct: 556 KSL 558
[245][TOP]
>UniRef100_A1YIB3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Capniomyces
stellatus RepID=A1YIB3_9FUNG
Length = 1024
Score = 139 bits (349), Expect = 1e-31
Identities = 66/123 (53%), Positives = 87/123 (70%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQAN+PVMGIVQDTL TKRDT + D+ M+ L+ +DG +P P ILKP+PL
Sbjct: 451 VSPQANKPVMGIVQDTLCALLMFTKRDTLMRLDMVMSLLLKVPGWDGLIPTPCILKPQPL 510
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
W+GKQ+F+LIIPK IN + H D ET + +PGD++V IE GELL+G +CK+T+G
Sbjct: 511 WSGKQIFSLIIPKGINCYTFFKDHPDNETAWCSPGDSRVVIENGELLSGIICKQTVGAVR 570
Query: 362 GSL 370
G +
Sbjct: 571 GGI 573
[246][TOP]
>UniRef100_Q6JTX0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Macrobiotus
islandicus RepID=Q6JTX0_9BILA
Length = 297
Score = 137 bits (346), Expect = 3e-31
Identities = 67/112 (59%), Positives = 83/112 (74%), Gaps = 4/112 (3%)
Frame = +2
Query: 47 TLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 226
TL RK+TKRD FIEKD M LMW +DGK+P PAILKPRPLWTGKQ+F+LIIP +
Sbjct: 1 TLTAVRKMTKRDVFIEKDQIMQLLMWHPGWDGKIPTPAILKPRPLWTGKQLFSLIIPGNV 60
Query: 227 NLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTLGTSNGSL 370
N++R + H D E +I+PGDT+V IE G+L++G +CKKTLGTS GSL
Sbjct: 61 NVIRTHSTHPDDEDDGPYKWISPGDTKVLIENGQLISGIVCKKTLGTSAGSL 112
[247][TOP]
>UniRef100_Q9AXN0 DNA-directed RNA polymerase n=1 Tax=Glaucosphaera vacuolata
RepID=Q9AXN0_9RHOD
Length = 1746
Score = 137 bits (345), Expect = 4e-31
Identities = 69/123 (56%), Positives = 93/123 (75%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ N+PVMGIVQDTL+G T+RDTF+EKD+ MN L+ + +DG +P PAILKPR L
Sbjct: 498 VSPQGNKPVMGIVQDTLVGTMLFTQRDTFMEKDLVMNLLLHFRGWDGVIPPPAILKPRQL 557
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSN 361
WTGKQ+F++I+P +NL+R+S H D + GDT+V I RGELL+GT+ K+T+G++
Sbjct: 558 WTGKQLFSMILP-DVNLVRFSNTHDDDD--IENAGDTKVLISRGELLSGTVDKRTVGSAA 614
Query: 362 GSL 370
SL
Sbjct: 615 NSL 617
[248][TOP]
>UniRef100_B4YT41 DNA-directed RNA polymerase (Fragment) n=1 Tax=Macrogyrus oblongus
RepID=B4YT41_9COLE
Length = 554
Score = 137 bits (344), Expect = 5e-31
Identities = 67/114 (58%), Positives = 85/114 (74%), Gaps = 4/114 (3%)
Frame = +2
Query: 41 QDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPK 220
QDTL RK+TKRD FI+K+ MN LM+ +DGK+P PAILKP+PLWTGKQ+F+LIIP
Sbjct: 1 QDTLTAIRKMTKRDVFIDKEQMMNLLMFLPIWDGKMPRPAILKPKPLWTGKQIFSLIIPG 60
Query: 221 QINLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTLGTSNGSL 370
+N++R + H D E +I+PGDT+V +E GEL+ G LCKKTLGTS GSL
Sbjct: 61 NVNMIRTHSTHPDDEDDGPYRWISPGDTKVMVEHGELVMGILCKKTLGTSAGSL 114
[249][TOP]
>UniRef100_Q76IJ5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Kuzuhaea
moniliformis RepID=Q76IJ5_9FUNG
Length = 352
Score = 136 bits (343), Expect = 6e-31
Identities = 69/134 (51%), Positives = 89/134 (66%), Gaps = 11/134 (8%)
Frame = +2
Query: 2 VSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPL 181
VSPQ N PVMGIVQDTL G T+RDTF+++ MN LMW +DG++P PAI P+PL
Sbjct: 24 VSPQKNAPVMGIVQDTLCGINLFTRRDTFLDRGQVMNLLMWLPRWDGQIPMPAICYPKPL 83
Query: 182 WTGKQVFNLIIPKQINLLRYSAWHADTE------TGF-----ITPGDTQVRIERGELLAG 328
WTGKQ+ +LI+PK +LL + + H D E GF +PGDT+VR GEL+ G
Sbjct: 84 WTGKQLISLIVPKGTSLLTFHSTHPDGEGVGSNVQGFNVEAEASPGDTRVRFMDGELVCG 143
Query: 329 TLCKKTLGTSNGSL 370
+CK+T+GTS G L
Sbjct: 144 IVCKRTVGTSQGGL 157
[250][TOP]
>UniRef100_Q2TDG7 DNA-directed RNA polymerase (Fragment) n=2 Tax=Aculeata
RepID=Q2TDG7_9HYME
Length = 296
Score = 136 bits (342), Expect = 8e-31
Identities = 66/113 (58%), Positives = 83/113 (73%), Gaps = 4/113 (3%)
Frame = +2
Query: 44 DTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQ 223
DTL RK+TKRD FIEK+ MN LM+ +DGK+P P ILKP+PLWTGKQ+F+LIIP
Sbjct: 1 DTLTAVRKMTKRDVFIEKEQMMNILMFLPSWDGKMPQPCILKPKPLWTGKQIFSLIIPGN 60
Query: 224 INLLRYSAWHADTETG----FITPGDTQVRIERGELLAGTLCKKTLGTSNGSL 370
+N++R + H D E +I+PGDT+V +E GEL+ G LCKKTLGTS GSL
Sbjct: 61 VNMIRTHSTHPDEEDDGPYKWISPGDTKVMVEHGELIMGILCKKTLGTSAGSL 113