[UP]
[1][TOP]
>UniRef100_O23215 Transcription initiation factor like protein n=1 Tax=Arabidopsis
thaliana RepID=O23215_ARATH
Length = 503
Score = 334 bits (856), Expect = 2e-90
Identities = 168/168 (100%), Positives = 168/168 (100%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG
Sbjct: 156 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 215
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA
Sbjct: 216 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 275
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNYT 505
IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNYT
Sbjct: 276 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNYT 323
[2][TOP]
>UniRef100_B9S6G3 RNA polymerase II transcription factor, putative n=1 Tax=Ricinus
communis RepID=B9S6G3_RICCO
Length = 511
Score = 328 bits (840), Expect = 2e-88
Identities = 165/168 (98%), Positives = 166/168 (98%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
QLFRDCCSATCLRNRSVEALATA LVQAIREAQEPRTLQEISIAANV QKEIGKYIKILG
Sbjct: 156 QLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILG 215
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA
Sbjct: 216 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 275
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNYT 505
IYLACQLEDKRKTQAEICK+TGLTEVTLRKVYKELLENWDDLLPSNYT
Sbjct: 276 IYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYT 323
[3][TOP]
>UniRef100_B9HEV3 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9HEV3_POPTR
Length = 278
Score = 323 bits (829), Expect = 3e-87
Identities = 163/168 (97%), Positives = 164/168 (97%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
QLFRDCCSATCLRNRSVEALATA LVQAIREAQEPRTLQEISIAANV QKEIGKYIKILG
Sbjct: 88 QLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILG 147
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA
Sbjct: 148 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 207
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNYT 505
IYLACQLEDKRKTQAEICK+TGLTEVTLRKVYKELLENW DLLP NYT
Sbjct: 208 IYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWGDLLPKNYT 255
[4][TOP]
>UniRef100_UPI0001983170 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001983170
Length = 540
Score = 323 bits (827), Expect = 5e-87
Identities = 163/168 (97%), Positives = 165/168 (98%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
+LFRDC SATCLRNRSVEALATA LVQAIREAQEPRTLQEISIAANV QKEIGKYIKILG
Sbjct: 176 ELFRDCSSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILG 235
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA
Sbjct: 236 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 295
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNYT 505
IYLACQLEDKRKTQAEICK+TGLTEVTLRKVYKELLENWDDLLPSNYT
Sbjct: 296 IYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYT 343
[5][TOP]
>UniRef100_A7PUX2 Chromosome chr4 scaffold_32, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PUX2_VITVI
Length = 523
Score = 323 bits (827), Expect = 5e-87
Identities = 163/168 (97%), Positives = 165/168 (98%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
+LFRDC SATCLRNRSVEALATA LVQAIREAQEPRTLQEISIAANV QKEIGKYIKILG
Sbjct: 159 ELFRDCSSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILG 218
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA
Sbjct: 219 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 278
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNYT 505
IYLACQLEDKRKTQAEICK+TGLTEVTLRKVYKELLENWDDLLPSNYT
Sbjct: 279 IYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYT 326
[6][TOP]
>UniRef100_Q93YB0 TFIIB-related protein (Fragment) n=1 Tax=Spinacia oleracea
RepID=Q93YB0_SPIOL
Length = 414
Score = 321 bits (822), Expect = 2e-86
Identities = 160/168 (95%), Positives = 165/168 (98%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
QLFRDC SATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAAN+ QKEIGKYIKILG
Sbjct: 149 QLFRDCSSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANLPQKEIGKYIKILG 208
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
EALQLSQPINSNSI+VHMPRFC LLQLNKSAQELATHIGEVV+NKCFCTRRNPISISAAA
Sbjct: 209 EALQLSQPINSNSIAVHMPRFCNLLQLNKSAQELATHIGEVVMNKCFCTRRNPISISAAA 268
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNYT 505
IYLACQLED+RKTQAEICK+TGLTEVTLRKVYKELLENWDDLLPSNYT
Sbjct: 269 IYLACQLEDRRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYT 316
[7][TOP]
>UniRef100_Q9FYX3 BAC19.3 n=1 Tax=Solanum lycopersicum RepID=Q9FYX3_SOLLC
Length = 425
Score = 316 bits (810), Expect = 5e-85
Identities = 158/167 (94%), Positives = 163/167 (97%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
QLFRDC SATCLRNRSVEALATA LV AIREAQEPRTLQEIS+AAN+ QKEIGKYIKILG
Sbjct: 156 QLFRDCSSATCLRNRSVEALATAALVHAIREAQEPRTLQEISVAANLPQKEIGKYIKILG 215
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEV+INKCFCTRRNPISISAAA
Sbjct: 216 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVIINKCFCTRRNPISISAAA 275
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
IYLACQLEDKRKTQAEICK+TGLTEVTLRKVYKELLENWDDLLPS+Y
Sbjct: 276 IYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSSY 322
[8][TOP]
>UniRef100_B9VXZ5 Transcription factor IIB n=1 Tax=Capsicum annuum RepID=B9VXZ5_CAPAN
Length = 426
Score = 316 bits (810), Expect = 5e-85
Identities = 158/167 (94%), Positives = 163/167 (97%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
QLFRDC SATCLRNRSVEALATA LV AIREAQEPRTLQEIS+AAN+ QKEIGKYIKILG
Sbjct: 157 QLFRDCSSATCLRNRSVEALATAALVHAIREAQEPRTLQEISVAANLPQKEIGKYIKILG 216
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEV+INKCFCTRRNPISISAAA
Sbjct: 217 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVIINKCFCTRRNPISISAAA 276
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
IYLACQLEDKRKTQAEICK+TGLTEVTLRKVYKELLENWDDLLPS+Y
Sbjct: 277 IYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSSY 323
[9][TOP]
>UniRef100_A9XLD7 Putative uncharacterized protein n=1 Tax=Capsicum frutescens
RepID=A9XLD7_CAPFR
Length = 426
Score = 316 bits (810), Expect = 5e-85
Identities = 158/167 (94%), Positives = 163/167 (97%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
QLFRDC SATCLRNRSVEALATA LV AIREAQEPRTLQEIS+AAN+ QKEIGKYIKILG
Sbjct: 157 QLFRDCSSATCLRNRSVEALATAALVHAIREAQEPRTLQEISVAANLPQKEIGKYIKILG 216
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEV+INKCFCTRRNPISISAAA
Sbjct: 217 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVIINKCFCTRRNPISISAAA 276
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
IYLACQLEDKRKTQAEICK+TGLTEVTLRKVYKELLENWDDLLPS+Y
Sbjct: 277 IYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSSY 323
[10][TOP]
>UniRef100_A2XDJ3 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2XDJ3_ORYSI
Length = 529
Score = 307 bits (786), Expect = 3e-82
Identities = 151/168 (89%), Positives = 162/168 (96%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
+LF+DC SATCLRNRSVEALATA LVQAIREAQEPRTLQEIS A+N+ QKEIGKYIKILG
Sbjct: 175 ELFKDCSSATCLRNRSVEALATAALVQAIREAQEPRTLQEISTASNLPQKEIGKYIKILG 234
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
E+L+LSQP+NSNSI+VHMPRFC+LLQLNKSAQELA HIGEVV+NKCFCTRRNPISISAAA
Sbjct: 235 ESLKLSQPLNSNSIAVHMPRFCSLLQLNKSAQELAAHIGEVVVNKCFCTRRNPISISAAA 294
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNYT 505
IYLACQLEDKRKTQAEICK+TGLTEVTLRKVYKELLENWDDLLP NYT
Sbjct: 295 IYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPPNYT 342
[11][TOP]
>UniRef100_C5WUN9 Putative uncharacterized protein Sb01g044030 n=1 Tax=Sorghum
bicolor RepID=C5WUN9_SORBI
Length = 533
Score = 304 bits (778), Expect = 2e-81
Identities = 149/168 (88%), Positives = 162/168 (96%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
+LF+DC SATCLRNRSVEALATA LVQAIREAQ+PRTLQEIS A+N+ QKEIGKYIKILG
Sbjct: 172 ELFKDCSSATCLRNRSVEALATAALVQAIREAQQPRTLQEISTASNLPQKEIGKYIKILG 231
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
E+L+LSQP+NSNSI+VHMPRFC+LLQLNKSAQELA HIGEVV+NKCFCTRRNPISISAAA
Sbjct: 232 ESLKLSQPLNSNSIAVHMPRFCSLLQLNKSAQELAAHIGEVVVNKCFCTRRNPISISAAA 291
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNYT 505
IYLACQLEDKRKTQAEICK+TGLTEVTLRKVYKELLENWDDLLP +YT
Sbjct: 292 IYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPPDYT 339
[12][TOP]
>UniRef100_Q93WQ2 TFIIB-related protein (Fragment) n=1 Tax=Zea mays
RepID=Q93WQ2_MAIZE
Length = 469
Score = 302 bits (774), Expect = 7e-81
Identities = 149/168 (88%), Positives = 161/168 (95%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
+LF+DC SATCLRNRSVEALATA LVQAIREAQ+PRTLQEIS A+N+ QKEIGKYIKILG
Sbjct: 109 ELFKDCSSATCLRNRSVEALATAALVQAIREAQQPRTLQEISTASNLPQKEIGKYIKILG 168
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
E+L+LSQP+NSNSI+VHMPRFC+LLQLNKSAQELA HIGEVV NKCFCTRRNPISISAAA
Sbjct: 169 ESLKLSQPLNSNSIAVHMPRFCSLLQLNKSAQELAAHIGEVVANKCFCTRRNPISISAAA 228
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNYT 505
IYLACQLEDKRKTQAEICK+TGLTEVTLRKVYKELLENWDDLLP +YT
Sbjct: 229 IYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPPDYT 276
[13][TOP]
>UniRef100_A8MR42 Putative uncharacterized protein At4g36650.2 n=1 Tax=Arabidopsis
thaliana RepID=A8MR42_ARATH
Length = 369
Score = 287 bits (734), Expect = 3e-76
Identities = 151/168 (89%), Positives = 154/168 (91%), Gaps = 9/168 (5%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG
Sbjct: 156 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 215
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA
Sbjct: 216 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 275
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVY---------KELLENW 478
IYLACQLEDKRKTQAEICKITGLTE RK + ++LLE W
Sbjct: 276 IYLACQLEDKRKTQAEICKITGLTE---RKHFPQPQSPQPAQQLLEPW 320
[14][TOP]
>UniRef100_A3AF39 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=A3AF39_ORYSJ
Length = 501
Score = 284 bits (727), Expect = 2e-75
Identities = 141/155 (90%), Positives = 150/155 (96%)
Frame = +2
Query: 41 NRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGEALQLSQPINSNS 220
NRSVEALATA LVQAIREAQEPRTLQEIS A+N+ QKEIGKYIKILGE+L+LSQP+NSNS
Sbjct: 160 NRSVEALATAALVQAIREAQEPRTLQEISTASNLPQKEIGKYIKILGESLKLSQPLNSNS 219
Query: 221 ISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKT 400
I+VHMPRFC+LLQLNKSAQELA HIGEVV+NKCFCTRRNPISISAAAIYLACQLEDKRKT
Sbjct: 220 IAVHMPRFCSLLQLNKSAQELAAHIGEVVVNKCFCTRRNPISISAAAIYLACQLEDKRKT 279
Query: 401 QAEICKITGLTEVTLRKVYKELLENWDDLLPSNYT 505
QAEICK+TGLTEVTLRKVYKELLENWDDLLP NYT
Sbjct: 280 QAEICKVTGLTEVTLRKVYKELLENWDDLLPPNYT 314
[15][TOP]
>UniRef100_Q0DUA7 Os03g0196900 protein (Fragment) n=2 Tax=Oryza sativa Japonica Group
RepID=Q0DUA7_ORYSJ
Length = 295
Score = 207 bits (528), Expect = 2e-52
Identities = 99/108 (91%), Positives = 106/108 (98%)
Frame = +2
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
E+L+LSQP+NSNSI+VHMPRFC+LLQLNKSAQELA HIGEVV+NKCFCTRRNPISISAAA
Sbjct: 1 ESLKLSQPLNSNSIAVHMPRFCSLLQLNKSAQELAAHIGEVVVNKCFCTRRNPISISAAA 60
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNYT 505
IYLACQLEDKRKTQAEICK+TGLTEVTLRKVYKELLENWDDLLP NYT
Sbjct: 61 IYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPPNYT 108
[16][TOP]
>UniRef100_UPI000194CD4A PREDICTED: hypothetical protein n=1 Tax=Taeniopygia guttata
RepID=UPI000194CD4A
Length = 316
Score = 110 bits (274), Expect = 7e-23
Identities = 61/166 (36%), Positives = 97/166 (58%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ RS +A+A+ACL A R+ PRT +EI + + +KEIG+ K++ +
Sbjct: 141 LFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILK 200
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + M RFC+ L L K Q ATHI + R+PIS++AAAI
Sbjct: 201 ALETS--VDLITTGDFMSRFCSNLGLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAI 258
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q +++TQ EI I G+ +VT+R+ Y+ + DL P+++
Sbjct: 259 YMASQASSEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPADF 304
[17][TOP]
>UniRef100_UPI0000E80A74 PREDICTED: similar to IIB protein n=1 Tax=Gallus gallus
RepID=UPI0000E80A74
Length = 468
Score = 109 bits (272), Expect = 1e-22
Identities = 61/166 (36%), Positives = 97/166 (58%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ RS +A+A+ACL A R+ PRT +EI + + +KEIG+ K++ +
Sbjct: 293 LFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILK 352
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + M RFC+ L L K Q ATHI + R+PIS++AAAI
Sbjct: 353 ALETS--VDLITTGDFMSRFCSNLGLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAI 410
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q +++TQ EI I G+ +VT+R+ Y+ + DL P+++
Sbjct: 411 YMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPADF 456
[18][TOP]
>UniRef100_UPI0000ECB339 Transcription initiation factor IIB (General transcription factor
TFIIB) (S300-II). n=1 Tax=Gallus gallus
RepID=UPI0000ECB339
Length = 306
Score = 109 bits (272), Expect = 1e-22
Identities = 61/166 (36%), Positives = 97/166 (58%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ RS +A+A+ACL A R+ PRT +EI + + +KEIG+ K++ +
Sbjct: 131 LFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILK 190
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + M RFC+ L L K Q ATHI + R+PIS++AAAI
Sbjct: 191 ALETS--VDLITTGDFMSRFCSNLGLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAI 248
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q +++TQ EI I G+ +VT+R+ Y+ + DL P+++
Sbjct: 249 YMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPADF 294
[19][TOP]
>UniRef100_Q63ZH4 LOC494830 protein n=1 Tax=Xenopus laevis RepID=Q63ZH4_XENLA
Length = 316
Score = 108 bits (271), Expect = 2e-22
Identities = 60/166 (36%), Positives = 97/166 (58%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ RS +A+A+ACL A R+ PRT +EI + + +KEIG+ K++ +
Sbjct: 141 LFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILK 200
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ + ++ + M RFC+ L L K Q ATHI + R+PIS++AAAI
Sbjct: 201 ALETN--VDLITTGDFMSRFCSNLGLTKQVQMAATHIARKAVELDLVPGRSPISVAAAAI 258
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q +++TQ EI I G+ +VT+R+ Y+ + DL P+++
Sbjct: 259 YMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPADF 304
[20][TOP]
>UniRef100_Q28G23 General transcription factor IIBgeneral transcription factor IIB
n=2 Tax=Xenopus (Silurana) tropicalis RepID=Q28G23_XENTR
Length = 316
Score = 108 bits (271), Expect = 2e-22
Identities = 60/166 (36%), Positives = 97/166 (58%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ RS +A+A+ACL A R+ PRT +EI + + +KEIG+ K++ +
Sbjct: 141 LFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILK 200
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ + ++ + M RFC+ L L K Q ATHI + R+PIS++AAAI
Sbjct: 201 ALETN--VDLITTGDFMSRFCSNLGLTKQVQMAATHIARKAVELDLVPGRSPISVAAAAI 258
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q +++TQ EI I G+ +VT+R+ Y+ + DL P+++
Sbjct: 259 YMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPADF 304
[21][TOP]
>UniRef100_Q3UZJ3 Putative uncharacterized protein n=1 Tax=Mus musculus
RepID=Q3UZJ3_MOUSE
Length = 316
Score = 108 bits (271), Expect = 2e-22
Identities = 61/166 (36%), Positives = 97/166 (58%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ R+ +A+A+ACL A R+ PRT +EI + + +KEIG+ K++ +
Sbjct: 141 LFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILK 200
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + M RFC+ L L K Q ATHI + R+PIS++AAAI
Sbjct: 201 ALETS--VDLITTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAI 258
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q +++TQ EI I G+ +VT+R+ Y+ + DL PS++
Sbjct: 259 YMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPSDF 304
[22][TOP]
>UniRef100_C3ZCP1 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3ZCP1_BRAFL
Length = 319
Score = 108 bits (271), Expect = 2e-22
Identities = 60/167 (35%), Positives = 96/167 (57%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ RS +A++ ACL A R+ PRT +EI + V +KEIG+ K++ +
Sbjct: 144 LFKQVNDQKSLKGRSNDAISAACLYIACRQEGVPRTFKEICAISRVSKKEIGRVFKLILK 203
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S + + M RFC+ L L Q ATHI + R+PIS++AAAI
Sbjct: 204 ALETS--VELITTGDFMSRFCSNLNLPSQVQRAATHIARKAVELDLVPGRSPISVAAAAI 261
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNYT 505
Y+A Q ++++TQ EI I G+ +VT+R+ Y+ + +L P+++T
Sbjct: 262 YMASQASEEKRTQKEIGDIAGVADVTIRQSYRLIYPRAHELFPADFT 308
[23][TOP]
>UniRef100_P29054 Transcription initiation factor IIB n=1 Tax=Xenopus laevis
RepID=TF2B_XENLA
Length = 316
Score = 108 bits (271), Expect = 2e-22
Identities = 60/166 (36%), Positives = 97/166 (58%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ RS +A+A+ACL A R+ PRT +EI + + +KEIG+ K++ +
Sbjct: 141 LFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILK 200
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ + ++ + M RFC+ L L K Q ATHI + R+PIS++AAAI
Sbjct: 201 ALETN--VDLITTGDFMSRFCSNLGLTKQVQMAATHIARKAVELDLVPGRSPISVAAAAI 258
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q +++TQ EI I G+ +VT+R+ Y+ + DL P+++
Sbjct: 259 YMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPADF 304
[24][TOP]
>UniRef100_P62915 Transcription initiation factor IIB n=3 Tax=Murinae
RepID=TF2B_MOUSE
Length = 316
Score = 108 bits (271), Expect = 2e-22
Identities = 61/166 (36%), Positives = 97/166 (58%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ R+ +A+A+ACL A R+ PRT +EI + + +KEIG+ K++ +
Sbjct: 141 LFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILK 200
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + M RFC+ L L K Q ATHI + R+PIS++AAAI
Sbjct: 201 ALETS--VDLITTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAI 258
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q +++TQ EI I G+ +VT+R+ Y+ + DL PS++
Sbjct: 259 YMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPSDF 304
[25][TOP]
>UniRef100_UPI0000F2BACE PREDICTED: similar to alpha initiation factor n=1 Tax=Monodelphis
domestica RepID=UPI0000F2BACE
Length = 316
Score = 108 bits (269), Expect = 3e-22
Identities = 60/166 (36%), Positives = 97/166 (58%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ R+ +A+A+ACL A R+ PRT +EI + + +KEIG+ K++ +
Sbjct: 141 LFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILK 200
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + M RFC+ L L K Q ATHI + R+PIS++AAAI
Sbjct: 201 ALETS--VDLITTGDFMSRFCSNLGLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAI 258
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q +++TQ EI I G+ +VT+R+ Y+ + DL P+++
Sbjct: 259 YMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPADF 304
[26][TOP]
>UniRef100_Q00403 Transcription initiation factor IIB n=5 Tax=Eutheria
RepID=TF2B_HUMAN
Length = 316
Score = 107 bits (268), Expect = 3e-22
Identities = 60/166 (36%), Positives = 97/166 (58%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ R+ +A+A+ACL A R+ PRT +EI + + +KEIG+ K++ +
Sbjct: 141 LFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILK 200
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + M RFC+ L L K Q ATHI + R+PIS++AAAI
Sbjct: 201 ALETS--VDLITTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAI 258
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q +++TQ EI I G+ +VT+R+ Y+ + DL P+++
Sbjct: 259 YMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPTDF 304
[27][TOP]
>UniRef100_UPI0000D99A17 PREDICTED: general transcription factor IIB n=1 Tax=Macaca mulatta
RepID=UPI0000D99A17
Length = 373
Score = 107 bits (268), Expect = 3e-22
Identities = 60/166 (36%), Positives = 97/166 (58%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ R+ +A+A+ACL A R+ PRT +EI + + +KEIG+ K++ +
Sbjct: 198 LFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILK 257
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + M RFC+ L L K Q ATHI + R+PIS++AAAI
Sbjct: 258 ALETS--VDLITTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAI 315
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q +++TQ EI I G+ +VT+R+ Y+ + DL P+++
Sbjct: 316 YMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPTDF 361
[28][TOP]
>UniRef100_UPI00015B5246 PREDICTED: similar to Transcription initiation factor IIB (General
transcription factor TFIIB) n=1 Tax=Nasonia vitripennis
RepID=UPI00015B5246
Length = 315
Score = 107 bits (266), Expect = 6e-22
Identities = 61/166 (36%), Positives = 96/166 (57%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ RS +A+A+ACL A R+ PRT +EI + + +KEIG+ K++ +
Sbjct: 140 LFKQVHDGKNLKGRSNDAIASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCFKLILK 199
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + M RFC+ L L Q ATHI ++ R+PIS++AAAI
Sbjct: 200 ALETS--VDLITTGDFMSRFCSNLGLPNMVQRAATHIARKAVDIDIVPGRSPISVTAAAI 257
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q D +K+Q EI I G+ +VT+R+ YK + + L P ++
Sbjct: 258 YMASQASDDKKSQKEIGDIAGVADVTIRQSYKLMFPHAARLFPEDF 303
[29][TOP]
>UniRef100_Q7SX98 General transcription factor IIB n=1 Tax=Danio rerio
RepID=Q7SX98_DANRE
Length = 316
Score = 107 bits (266), Expect = 6e-22
Identities = 61/166 (36%), Positives = 96/166 (57%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ RS +A+A+ACL A R+ PRT +EI + + +KEIG+ K++ +
Sbjct: 141 LFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILK 200
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + M RFC+ L L K Q AT+I + R+PIS++AAAI
Sbjct: 201 ALETS--VDLITTGDFMSRFCSNLGLPKQVQMAATYIARKAVELDLVPGRSPISVAAAAI 258
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q ++KTQ EI I G+ +VT+R+ Y+ + DL P ++
Sbjct: 259 YMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAADLFPPDF 304
[30][TOP]
>UniRef100_A2BIH7 General transcription factor IIB n=1 Tax=Danio rerio
RepID=A2BIH7_DANRE
Length = 316
Score = 107 bits (266), Expect = 6e-22
Identities = 61/166 (36%), Positives = 96/166 (57%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ RS +A+A+ACL A R+ PRT +EI + + +KEIG+ K++ +
Sbjct: 141 LFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILK 200
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + M RFC+ L L K Q AT+I + R+PIS++AAAI
Sbjct: 201 ALETS--VDLITTGDFMSRFCSNLGLPKQVQMAATYIARKAVELDLVPGRSPISVAAAAI 258
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q ++KTQ EI I G+ +VT+R+ Y+ + DL P ++
Sbjct: 259 YMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAADLFPPDF 304
[31][TOP]
>UniRef100_B3RPB4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
RepID=B3RPB4_TRIAD
Length = 340
Score = 107 bits (266), Expect = 6e-22
Identities = 62/166 (37%), Positives = 95/166 (57%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ RS +ALA+A L A R+ PRT +EI + + +KEIG+ K + +
Sbjct: 165 LFKQGYELKSLKGRSNDALASASLYIACRQEGVPRTFKEICAVSKISKKEIGRCFKAILK 224
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ + + S M RFC+ L L Q+ A+HI I R+P+S++AAAI
Sbjct: 225 ALETN--VEMISTQDFMSRFCSNLNLPNYVQKAASHIAHRAIELDLAPGRSPVSVTAAAI 282
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
YLA Q D +K+Q EI + G+ +VT+R+ Y+ LL DL P+++
Sbjct: 283 YLASQASDTKKSQKEIGDVAGVADVTIRQSYRLLLPRSKDLFPADF 328
[32][TOP]
>UniRef100_A8QEV5 Transcription initiation factor IIB, putative n=1 Tax=Brugia malayi
RepID=A8QEV5_BRUMA
Length = 309
Score = 107 bits (266), Expect = 6e-22
Identities = 63/167 (37%), Positives = 95/167 (56%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
++F+D + LR ++ EA A ACL A R+ PRT +EI A+ V +KEIG+ K++
Sbjct: 133 KIFKDVLDSKALRGKNNEAQAAACLYIACRKEGVPRTFKEICAASRVSKKEIGRCFKLII 192
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
++L+ S + + + M RFC L L S Q AT I + + R+PISI+AAA
Sbjct: 193 KSLETS--LEQITSADFMSRFCGNLGLPHSIQAAATRIAKKAVELDLVAGRSPISIAAAA 250
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
IY+A Q +KT EI +I G EVT+++ YK L +L P ++
Sbjct: 251 IYMASQASSNKKTAKEIGEIAGAAEVTVKQTYKLLYPRAGELFPEDF 297
[33][TOP]
>UniRef100_UPI000192557A PREDICTED: similar to general transcription factor IIB n=1
Tax=Hydra magnipapillata RepID=UPI000192557A
Length = 275
Score = 106 bits (264), Expect = 1e-21
Identities = 62/167 (37%), Positives = 97/167 (58%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
QLF+ L+ RS +A+A+ACL A R+ PRT +EI + + +KEIG+ K++
Sbjct: 99 QLFKQVHDQKSLKGRSNDAIASACLYIACRQEGVPRTFKEICAISKIPKKEIGRCFKLIL 158
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
+AL+ S I ++ M RFC+ L L S Q AT+I + R+P+S++AAA
Sbjct: 159 KALEASVDIITSED--FMSRFCSNLSLPASVQRAATYIARRAMELDLVPGRSPVSVAAAA 216
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
IYLA Q +K+Q +I I G+ +VT+R+ Y+ L+ DL P ++
Sbjct: 217 IYLASQASLDKKSQKDIGDIAGVADVTIRQSYRSLVVRAADLFPPDF 263
[34][TOP]
>UniRef100_B5XD83 Transcription initiation factor IIB n=1 Tax=Salmo salar
RepID=B5XD83_SALSA
Length = 318
Score = 105 bits (263), Expect = 1e-21
Identities = 60/166 (36%), Positives = 96/166 (57%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ R+ +A+A+ACL A R+ PRT +EI + + +KEIG+ K++ +
Sbjct: 143 LFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILK 202
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + M RFC+ L L K Q AT+I + R+PIS++AAAI
Sbjct: 203 ALETS--VDLITTGDFMSRFCSNLGLPKQVQMAATYIARKAVELDLVPGRSPISVAAAAI 260
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q ++KTQ EI I G+ +VT+R+ Y+ + DL P ++
Sbjct: 261 YMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAADLFPPDF 306
[35][TOP]
>UniRef100_Q2KIN8 Transcription initiation factor IIB n=1 Tax=Bos taurus
RepID=TF2B_BOVIN
Length = 316
Score = 105 bits (263), Expect = 1e-21
Identities = 59/166 (35%), Positives = 96/166 (57%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ R+ +A+A+ACL A R+ PRT +EI + + +KEIG+ K++ +
Sbjct: 141 LFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILK 200
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + M RFC+ L L K Q ATHI + R+PIS++ AAI
Sbjct: 201 ALETS--VDLITTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAEAAI 258
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q +++TQ EI I G+ +VT+R+ Y+ + DL P+++
Sbjct: 259 YMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPTDF 304
[36][TOP]
>UniRef100_UPI0000E479AC PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus
purpuratus RepID=UPI0000E479AC
Length = 321
Score = 105 bits (262), Expect = 2e-21
Identities = 60/166 (36%), Positives = 94/166 (56%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ LR RS +A+A ACL A R+ PRT +EI + V ++EIG+ K++ +
Sbjct: 146 LFKQVNDQRTLRGRSNDAIAAACLYIACRQEGVPRTFKEICAVSRVNKREIGRCFKLILK 205
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ + + + M RFC+ L L Q ATHI R+PIS++AAAI
Sbjct: 206 ALETNVVLITTGD--FMSRFCSNLSLPPKVQRAATHIARKADELDLVAGRSPISVTAAAI 263
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q +++++Q EI +I G+ +VT+R+ YK + DL P ++
Sbjct: 264 YMASQASEEKRSQKEIGEIAGVADVTIRQSYKLIYPKSHDLFPQDF 309
[37][TOP]
>UniRef100_B0WI57 Transcription initiation factor TFIIB n=1 Tax=Culex
quinquefasciatus RepID=B0WI57_CULQU
Length = 316
Score = 105 bits (262), Expect = 2e-21
Identities = 60/166 (36%), Positives = 94/166 (56%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ RS +A A+ACL A R+ PRT +EI + + +KEIG+ K+ +
Sbjct: 141 LFKQVHDGKNLKGRSNDAKASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCFKLTLK 200
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL S ++ + + M RFC L L + Q ATHI + R+PIS++AAAI
Sbjct: 201 ALATS--VDLITTADFMSRFCANLDLPNTVQRAATHIARKAVEMDIVPGRSPISVAAAAI 258
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q D++KT EI I G+ +VT+R+ Y+ + + +L P ++
Sbjct: 259 YMASQASDQKKTHKEIGDIAGVADVTIRQSYRLMYPHAAELFPEDF 304
[38][TOP]
>UniRef100_UPI0000521774 PREDICTED: similar to Transcription initiation factor IIB (General
transcription factor TFIIB) (S300-II) n=1 Tax=Ciona
intestinalis RepID=UPI0000521774
Length = 314
Score = 105 bits (261), Expect = 2e-21
Identities = 58/167 (34%), Positives = 97/167 (58%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
+LF+ + LR R+ +A++ ACL A R+ PRT +EI + + +KEIG+ K++
Sbjct: 138 KLFKQVYDSKSLRGRANDAISAACLYIACRQEGVPRTFKEICAISRISKKEIGRSFKLIV 197
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
+ L+ + + ++ M RFC+ L L Q AT+I + K R+PIS++AAA
Sbjct: 198 KNLETNVEVITSGD--FMSRFCSNLNLPPYVQRGATYIARKAVEKDLVAGRSPISVAAAA 255
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
IY+A Q ++++Q EI +I G+ EVT+R+ YK + DL P ++
Sbjct: 256 IYMASQASKEKRSQKEISEIAGVAEVTIRQSYKLMHPRAKDLFPEDF 302
[39][TOP]
>UniRef100_Q3UNY0 Putative uncharacterized protein n=1 Tax=Mus musculus
RepID=Q3UNY0_MOUSE
Length = 316
Score = 105 bits (261), Expect = 2e-21
Identities = 61/166 (36%), Positives = 95/166 (57%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ R+ +A+A ACL A R+ PRT +EI + + +KEIG+ K++ +
Sbjct: 141 LFKQVYEQKSLKGRANDAIAYACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILK 200
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + M RFC+ L L K Q ATHI + R+PIS++AAAI
Sbjct: 201 ALETS--VDLITTGDLMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAI 258
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q +++TQ EI I G+ +VT+R+ Y+ DL PS++
Sbjct: 259 YMASQASAEKRTQKEIGDIAGVADVTIRQSYRLNYPRAPDLFPSDF 304
[40][TOP]
>UniRef100_A7SH79 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SH79_NEMVE
Length = 310
Score = 105 bits (261), Expect = 2e-21
Identities = 60/167 (35%), Positives = 98/167 (58%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
QLF+ L+ RS + +A+ACL A R+ PRTL+EI + +KEIG+ K++
Sbjct: 134 QLFKQVHEQKSLKGRSNDTIASACLYIACRQEGVPRTLKEICAIGKISKKEIGRCFKLIL 193
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
+ L+ S + ++ M RFC+ L L S Q+ AT+I + R+PISI+AAA
Sbjct: 194 KHLETSVDLITSGD--FMSRFCSNLTLPLSVQKAATYIARRAVELDLVAGRSPISIAAAA 251
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
IY+A Q +++++Q EI I G+ +VT+R+ Y+ L +L P+++
Sbjct: 252 IYMASQASEEKRSQKEIGDIAGVADVTIRQSYRLLFPKARELFPADF 298
[41][TOP]
>UniRef100_UPI00017936E7 PREDICTED: similar to Transcription initiation factor IIB (General
transcription factor TFIIB) n=1 Tax=Acyrthosiphon pisum
RepID=UPI00017936E7
Length = 310
Score = 104 bits (260), Expect = 3e-21
Identities = 61/166 (36%), Positives = 96/166 (57%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ RS +A+A+A L A R+ PRT +EI + V +KEIG+ K++ +
Sbjct: 135 LFKQVHDGKNLKGRSNDAIASASLYIACRQEGVPRTFKEICAVSKVSKKEIGRVFKLILK 194
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + M RFC L L Q ATHI + + R+PIS++AAAI
Sbjct: 195 ALETS--VDLITTGDFMSRFCCNLGLPNMVQRAATHIAKKAVEYDIVPGRSPISVAAAAI 252
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
++A Q D++++Q EI I G+ EVT+++ YK +L N L P ++
Sbjct: 253 FMASQASDEKRSQKEIGDIAGVAEVTIKQSYKLILANATLLFPEDF 298
[42][TOP]
>UniRef100_Q17AB9 Transcription initiation factor TFIIB n=1 Tax=Aedes aegypti
RepID=Q17AB9_AEDAE
Length = 318
Score = 104 bits (260), Expect = 3e-21
Identities = 60/166 (36%), Positives = 94/166 (56%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ RS +A A+ACL A R+ PRT +EI + + +KEIG+ K+ +
Sbjct: 141 LFKQVHDGKNLKGRSNDAKASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCFKLTLK 200
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL S ++ + + M RFC L L + Q ATHI + R+PIS++AAAI
Sbjct: 201 ALATS--VDLITTADFMSRFCANLDLPNTVQRAATHIARKAVEMDIVPGRSPISVAAAAI 258
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q D++KT EI I G+ +VT+R+ Y+ + + +L P ++
Sbjct: 259 YMASQASDQKKTHKEIGDIAGVADVTIRQSYRLMHPHAAELFPEDF 304
[43][TOP]
>UniRef100_Q17AB8 Transcription initiation factor TFIIB n=1 Tax=Aedes aegypti
RepID=Q17AB8_AEDAE
Length = 316
Score = 104 bits (260), Expect = 3e-21
Identities = 60/166 (36%), Positives = 94/166 (56%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ RS +A A+ACL A R+ PRT +EI + + +KEIG+ K+ +
Sbjct: 141 LFKQVHDGKNLKGRSNDAKASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCFKLTLK 200
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL S ++ + + M RFC L L + Q ATHI + R+PIS++AAAI
Sbjct: 201 ALATS--VDLITTADFMSRFCANLDLPNTVQRAATHIARKAVEMDIVPGRSPISVAAAAI 258
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q D++KT EI I G+ +VT+R+ Y+ + + +L P ++
Sbjct: 259 YMASQASDQKKTHKEIGDIAGVADVTIRQSYRLMHPHAAELFPEDF 304
[44][TOP]
>UniRef100_Q2FU09 Transcription initiation factor IIB (TFIIB) n=1
Tax=Methanospirillum hungatei JF-1 RepID=Q2FU09_METHJ
Length = 337
Score = 104 bits (259), Expect = 4e-21
Identities = 59/159 (37%), Positives = 88/159 (55%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++RD +R RS+E +A A L A R+ PRTL EI+ + V +KEIG+ + +
Sbjct: 176 VYRDAVDKNLIRGRSIEGVAAAALYAACRQCSVPRTLDEIAEVSRVSRKEIGRTYRFISR 235
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L + S ++PRFC+ LQL Q A I + + R P ++AAAI
Sbjct: 236 ELGLK--LLPTSPIDYVPRFCSGLQLKGEVQSRAVEILRQAGERELTSGRGPTGVAAAAI 293
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
Y++ L +R+TQ E+ ++ G+TEVT+R YKEL E D
Sbjct: 294 YISSILGGERRTQREVAEVAGVTEVTIRNRYKELAEKLD 332
[45][TOP]
>UniRef100_Q7QG89 AGAP009558-PA n=1 Tax=Anopheles gambiae RepID=Q7QG89_ANOGA
Length = 316
Score = 103 bits (258), Expect = 5e-21
Identities = 60/166 (36%), Positives = 92/166 (55%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ RS +A A+ACL A R+ PRT +EI + + +KEIG+ K+ +
Sbjct: 141 LFKQVHDGKNLKGRSNDAKASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCFKLTLK 200
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL S ++ + + M RFC L L Q ATHI + R+PIS++AAAI
Sbjct: 201 ALATS--VDLITTADFMSRFCANLDLPNVVQRAATHIARKAVEMDIVPGRSPISVAAAAI 258
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q D +KT EI I G+ +VT+R+ Y+ + + +L P ++
Sbjct: 259 YMASQASDNKKTHKEIGDIAGVADVTIRQSYRLMYPHAAELFPEDF 304
[46][TOP]
>UniRef100_UPI00003C0936 PREDICTED: similar to Transcription initiation factor IIB (General
transcription factor TFIIB) isoform 1 n=1 Tax=Apis
mellifera RepID=UPI00003C0936
Length = 315
Score = 103 bits (256), Expect = 8e-21
Identities = 58/166 (34%), Positives = 95/166 (57%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ R+ +A+A+ACL A R+ PRT +EI + + +KEIG+ K++ +
Sbjct: 140 LFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCFKLILK 199
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + M RFC+ L L Q ATHI + R+PIS++AAAI
Sbjct: 200 ALETS--VDLITTGDFMSRFCSNLGLPNMVQRAATHIARKAVEIDIVPGRSPISVAAAAI 257
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q + +++Q EI I G+ +VT+R+ YK + + L P ++
Sbjct: 258 YMASQASEDKRSQKEIGDIAGVADVTIRQSYKLMYPHAGKLFPEDF 303
[47][TOP]
>UniRef100_UPI00017B0FC9 UPI00017B0FC9 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B0FC9
Length = 318
Score = 103 bits (256), Expect = 8e-21
Identities = 59/166 (35%), Positives = 95/166 (57%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ R+ +A+A+ACL A R+ PRT +EI + + +KEIG+ K++ +
Sbjct: 143 LFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILK 202
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + M RFC+ L L K Q AT I + R+PIS++AAAI
Sbjct: 203 ALETS--VDLITTGDFMSRFCSNLGLPKQVQMAATFIARKAVELDLVPGRSPISVAAAAI 260
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q ++KTQ EI I G+ +VT+R+ Y+ + +L P ++
Sbjct: 261 YMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAELFPPDF 306
[48][TOP]
>UniRef100_UPI00016E2A21 UPI00016E2A21 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E2A21
Length = 318
Score = 103 bits (256), Expect = 8e-21
Identities = 59/166 (35%), Positives = 95/166 (57%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ R+ +A+A+ACL A R+ PRT +EI + + +KEIG+ K++ +
Sbjct: 143 LFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILK 202
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + M RFC+ L L K Q AT I + R+PIS++AAAI
Sbjct: 203 ALETS--VDLITTGDFMSRFCSNLGLPKQVQMAATFIARKAVELDLVPGRSPISVAAAAI 260
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q ++KTQ EI I G+ +VT+R+ Y+ + +L P ++
Sbjct: 261 YMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAELFPPDF 306
[49][TOP]
>UniRef100_Q6B512 General transcription factor II B n=1 Tax=Oreochromis mossambicus
RepID=Q6B512_OREMO
Length = 318
Score = 103 bits (256), Expect = 8e-21
Identities = 59/166 (35%), Positives = 95/166 (57%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ R+ +A+A+ACL A R+ PRT +EI + + +KEIG+ K++ +
Sbjct: 143 LFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILK 202
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + M RFC+ L L K Q AT I + R+PIS++AAAI
Sbjct: 203 ALETS--VDLITTGDFMSRFCSNLGLPKQVQMAATFIARKAVELDLVPGRSPISVAAAAI 260
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q ++KTQ EI I G+ +VT+R+ Y+ + +L P ++
Sbjct: 261 YMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAELFPPDF 306
[50][TOP]
>UniRef100_Q4SSL3 Chromosome 15 SCAF14367, whole genome shotgun sequence. (Fragment)
n=1 Tax=Tetraodon nigroviridis RepID=Q4SSL3_TETNG
Length = 344
Score = 103 bits (256), Expect = 8e-21
Identities = 59/166 (35%), Positives = 95/166 (57%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ R+ +A+A+ACL A R+ PRT +EI + + +KEIG+ K++ +
Sbjct: 169 LFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILK 228
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + M RFC+ L L K Q AT I + R+PIS++AAAI
Sbjct: 229 ALETS--VDLITTGDFMSRFCSNLGLPKQVQMAATFIARKAVELDLVPGRSPISVAAAAI 286
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q ++KTQ EI I G+ +VT+R+ Y+ + +L P ++
Sbjct: 287 YMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAELFPPDF 332
[51][TOP]
>UniRef100_B8GJQ9 Transcription initiation factor IIB n=1 Tax=Methanosphaerula
palustris E1-9c RepID=TF2B_METPE
Length = 334
Score = 103 bits (256), Expect = 8e-21
Identities = 58/159 (36%), Positives = 87/159 (54%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++RD +R RS+E +A A L A R+ PRTL EI+ + V +KEIG+ + +
Sbjct: 173 VYRDAVDKNLIRGRSIEGVAAAALYAACRQCSVPRTLDEIAEVSRVSRKEIGRTYRFISR 232
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L + S ++PRFC+ L L Q A I + + R P ++AAAI
Sbjct: 233 ELGLK--LLPTSPIDYVPRFCSGLTLKGEVQSRAVEILRQAAERELTSGRGPTGVAAAAI 290
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
Y++ L +R+TQ E+ ++ G+TEVT+R YKEL E D
Sbjct: 291 YISSILGGERRTQREVAEVAGVTEVTIRNRYKELAEKLD 329
[52][TOP]
>UniRef100_UPI0001758201 PREDICTED: similar to Transcription initiation factor IIB (General
transcription factor TFIIB) n=1 Tax=Tribolium castaneum
RepID=UPI0001758201
Length = 313
Score = 102 bits (255), Expect = 1e-20
Identities = 58/166 (34%), Positives = 95/166 (57%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ RS +A+A+ACL A R+ PRT +EI + + ++EIG+ K++ +
Sbjct: 138 LFKQVHDGRNLKGRSNDAIASACLYIACRQEGVPRTFKEICAVSKISKREIGRCFKLILK 197
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + M RFC+ L L Q ATHI + R+PIS++AAAI
Sbjct: 198 ALETS--VDLITTGDFMSRFCSNLGLPNMVQRAATHIARKAVELDIVPGRSPISVAAAAI 255
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q + +++Q EI I G+ +VT+R+ YK + + L P ++
Sbjct: 256 YMASQASEDKRSQKEIGDIAGVADVTIRQSYKLMYPHAVKLFPEDF 301
[53][TOP]
>UniRef100_C8S6Q6 Transcription factor TFIIB cyclin-related protein n=1
Tax=Ferroglobus placidus DSM 10642 RepID=C8S6Q6_FERPL
Length = 328
Score = 102 bits (255), Expect = 1e-20
Identities = 58/156 (37%), Positives = 88/156 (56%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E + A L A R+A PRTL EI+ + V +KEIG+ + +
Sbjct: 167 IYRKAVEKNLIRGRSIEGVVAAALYAACRQAGVPRTLDEIATYSRVDRKEIGRTYRFIAR 226
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L + S + ++PRFC L L+ Q+ A I + K + R P ++AAAI
Sbjct: 227 ELGLK--LLPTSPADYVPRFCAALGLSGEVQKKAIEIIKKAEEKELTSGRGPTGVAAAAI 284
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
Y+A L +R+TQ E+ ++ G+TEVT+R YKEL E
Sbjct: 285 YIASILTGERRTQREVAEVAGVTEVTIRNRYKELAE 320
[54][TOP]
>UniRef100_B5DHX4 GA27746 n=1 Tax=Drosophila pseudoobscura pseudoobscura
RepID=B5DHX4_DROPS
Length = 314
Score = 102 bits (254), Expect = 1e-20
Identities = 59/166 (35%), Positives = 94/166 (56%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ RS +A A+ACL A R+ PRT +EI + + +KEIG+ K+ +
Sbjct: 139 LFKQVHDGKNLKGRSNDAKASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCFKLTLK 198
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + + M RFC L L Q ATHI + + R+PIS++AAAI
Sbjct: 199 ALETS--VDLITTADFMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAI 256
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q + +++Q EI I G+ +VT+R+ YK + + L P ++
Sbjct: 257 YMASQASEHKRSQKEIGDIAGVADVTIRQSYKLMYPHAAKLFPEDF 302
[55][TOP]
>UniRef100_B4KHS4 GI20422 n=2 Tax=Drosophila RepID=B4KHS4_DROMO
Length = 315
Score = 102 bits (254), Expect = 1e-20
Identities = 59/166 (35%), Positives = 94/166 (56%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ RS +A A+ACL A R+ PRT +EI + + +KEIG+ K+ +
Sbjct: 140 LFKQVHDGKNLKGRSNDAKASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCFKLTLK 199
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + + M RFC L L Q ATHI + + R+PIS++AAAI
Sbjct: 200 ALETS--VDLITTADFMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAI 257
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q + +++Q EI I G+ +VT+R+ YK + + L P ++
Sbjct: 258 YMASQASEHKRSQKEIGDIAGVADVTIRQSYKLMYPHAAKLFPEDF 303
[56][TOP]
>UniRef100_B4HWP7 GM18405 n=1 Tax=Drosophila sechellia RepID=B4HWP7_DROSE
Length = 315
Score = 102 bits (254), Expect = 1e-20
Identities = 59/166 (35%), Positives = 94/166 (56%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ RS +A A+ACL A R+ PRT +EI + + +KEIG+ K+ +
Sbjct: 140 LFKQVHDGKNLKGRSNDAKASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCFKLTLK 199
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + + M RFC L L Q ATHI + + R+PIS++AAAI
Sbjct: 200 ALETS--VDLITTADFMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAI 257
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q + +++Q EI I G+ +VT+R+ YK + + L P ++
Sbjct: 258 YMASQASEHKRSQKEIGDIAGVADVTIRQSYKLMYPHAAKLFPEHF 303
[57][TOP]
>UniRef100_A2STL9 Transcription initiation factor IIB (TFIIB) n=1
Tax=Methanocorpusculum labreanum Z RepID=A2STL9_METLZ
Length = 340
Score = 102 bits (254), Expect = 1e-20
Identities = 58/159 (36%), Positives = 87/159 (54%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++RD +R RS+E +A A L A R+ PRTL EI+ + V +KEIG+ + +
Sbjct: 179 VYRDAVDKNLIRGRSIEGVAAAALYAACRQCNVPRTLDEIAEVSRVSRKEIGRTYRFISR 238
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L + S ++PRFC+ L L Q A I + + + R P ++AAAI
Sbjct: 239 ELGLK--LLPTSPGDYVPRFCSGLGLKGEVQSRAMEILKQAGERELTSGRGPTGVAAAAI 296
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
Y++ L +R+TQ E+ + G+TEVT+R YKEL E D
Sbjct: 297 YISSILSGERRTQREVADVAGVTEVTIRNRYKELAEQLD 335
[58][TOP]
>UniRef100_A3CSQ6 Transcription initiation factor IIB n=1 Tax=Methanoculleus
marisnigri JR1 RepID=TF2B_METMJ
Length = 337
Score = 102 bits (254), Expect = 1e-20
Identities = 58/159 (36%), Positives = 87/159 (54%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++RD +R RS+E +A A L A R+ PRTL EI+ + V +KEIG+ + +
Sbjct: 176 VYRDAVDKNLIRGRSIEGVAAAALYAACRQCSVPRTLDEIAEVSRVSRKEIGRTYRFISR 235
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L + S ++PRFC+ L L Q A I + + R P ++AAAI
Sbjct: 236 ELGLK--LLPTSPIDYVPRFCSGLNLKGEVQSRAVEILRQAGERELTSGRGPTGVAAAAI 293
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
Y++ L +R+TQ E+ ++ G+TEVT+R YKEL E D
Sbjct: 294 YISSILGGERRTQREVAEVAGVTEVTIRNRYKELAEKLD 332
[59][TOP]
>UniRef100_Q9NHP7 Transcription initiation factor IIB n=1 Tax=Drosophila virilis
RepID=TF2B_DROVI
Length = 293
Score = 102 bits (254), Expect = 1e-20
Identities = 59/166 (35%), Positives = 94/166 (56%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ RS +A A+ACL A R+ PRT +EI + + +KEIG+ K+ +
Sbjct: 118 LFKQVHDGKNLKGRSNDAKASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCFKLTLK 177
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + + M RFC L L Q ATHI + + R+PIS++AAAI
Sbjct: 178 ALETS--VDLITTADFMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAI 235
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q + +++Q EI I G+ +VT+R+ YK + + L P ++
Sbjct: 236 YMASQASEHKRSQKEIGDIAGVADVTIRQSYKLMYPHAAKLFPEDF 281
[60][TOP]
>UniRef100_P29052 Transcription initiation factor IIB n=6 Tax=Sophophora
RepID=TF2B_DROME
Length = 315
Score = 102 bits (254), Expect = 1e-20
Identities = 59/166 (35%), Positives = 94/166 (56%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ RS +A A+ACL A R+ PRT +EI + + +KEIG+ K+ +
Sbjct: 140 LFKQVHDGKNLKGRSNDAKASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCFKLTLK 199
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + + M RFC L L Q ATHI + + R+PIS++AAAI
Sbjct: 200 ALETS--VDLITTADFMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAI 257
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q + +++Q EI I G+ +VT+R+ YK + + L P ++
Sbjct: 258 YMASQASEHKRSQKEIGDIAGVADVTIRQSYKLMYPHAAKLFPEDF 303
[61][TOP]
>UniRef100_A7IAR4 Transcription initiation factor IIB n=1 Tax=Candidatus
Methanoregula boonei 6A8 RepID=TF2B_METB6
Length = 334
Score = 102 bits (253), Expect = 2e-20
Identities = 58/159 (36%), Positives = 87/159 (54%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++RD +R RS+E +A A L A R+ PRTL EI+ + V +KEIG+ + +
Sbjct: 173 VYRDAVDKNLIRGRSIEGVAAAALYAACRQCSVPRTLDEIAEVSRVSRKEIGRTYRFISR 232
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L + S ++PRFC+ L L Q A I + + R P ++AAAI
Sbjct: 233 ELGLK--LLPTSPIDYVPRFCSGLTLKGEVQSRAVEILRQAGERELTSGRGPTGVAAAAI 290
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
Y++ L +R+TQ E+ ++ G+TEVT+R YKEL E D
Sbjct: 291 YISSILGGERRTQREVAEVAGVTEVTIRNRYKELAEKLD 329
[62][TOP]
>UniRef100_Q54FD6 Transcription initiation factor IIB n=1 Tax=Dictyostelium
discoideum RepID=TF2B_DICDI
Length = 325
Score = 102 bits (253), Expect = 2e-20
Identities = 54/166 (32%), Positives = 93/166 (56%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
+LFR + RSV+ + A L A R+ RT +EI+ NV +KEI + KI+
Sbjct: 147 ELFRFMDDKKSTKGRSVDGMVAAALYIACRQEHLSRTFKEIAALTNVPKKEISRCYKIMK 206
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
E + + S RFC+ L+L ++ A H+ ++ ++ ++PIS++AA+
Sbjct: 207 ETFASVLNLQTISSEDFTSRFCSTLKLPNDVKKGAEHVSKMAMDMGIVAGKSPISVTAAS 266
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSN 499
IY+ QL +++TQ +I ++G++EVT+R YK+L D L+PS+
Sbjct: 267 IYMVSQLSPEKRTQKQIADVSGVSEVTIRNAYKDLYAKRDQLIPSD 312
[63][TOP]
>UniRef100_O16991 Transcription initiation factor IIB n=1 Tax=Caenorhabditis elegans
RepID=TF2B_CAEEL
Length = 306
Score = 102 bits (253), Expect = 2e-20
Identities = 59/167 (35%), Positives = 93/167 (55%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
++F+D + LR ++ EA A ACL A R+ PRT +EI + V +KEIG+ KI+
Sbjct: 130 RIFKDVLESKALRGKNNEAQAAACLYIACRKDGVPRTFKEICAVSRVSKKEIGRCFKIIV 189
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
+L+ + + + + M RFC L L S Q AT I + ++ R PISI+AAA
Sbjct: 190 RSLETN--LEQITSADFMSRFCGNLSLPNSIQAAATRIAKCAVDMDLVAGRTPISIAAAA 247
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
IY+A Q ++++ EI + G E+T+R+ YK L +L P ++
Sbjct: 248 IYMASQASAEKRSAKEIGDVAGAAEITVRQTYKLLYPKALELFPKDF 294
[64][TOP]
>UniRef100_B3T9W7 Putative transcription factor TFIIB repeat protein n=1
Tax=uncultured marine microorganism HF4000_APKG7N23
RepID=B3T9W7_9ZZZZ
Length = 242
Score = 101 bits (252), Expect = 2e-20
Identities = 60/159 (37%), Positives = 89/159 (55%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
L+R +R RSVE +A A L A R + PRTL EI+ A+ +KE+G+ + +
Sbjct: 81 LYRRAVQDNLVRGRSVEGVAAAALYGACRRCEVPRTLSEITEASRASKKEVGRTYRYISR 140
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L+L+ + S +V++ RFC L+L + A +I I + R P ++AAAI
Sbjct: 141 ELKLN--LQPASPAVYIIRFCRELELPGYVESAAINILNQAIEAELTSGRGPTGVAAAAI 198
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
Y+A + D+RKTQ I G+TEVT+R YKEL +N D
Sbjct: 199 YIASVVYDQRKTQKTIADTVGVTEVTIRNRYKELAKNLD 237
[65][TOP]
>UniRef100_UPI000186D9D8 transcription initiation factor iib, putative n=1 Tax=Pediculus
humanus corporis RepID=UPI000186D9D8
Length = 313
Score = 101 bits (251), Expect = 3e-20
Identities = 58/166 (34%), Positives = 93/166 (56%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ R+ +A+A+A L A R+ PRT +EI + + +KEIG+ K++ +
Sbjct: 138 LFKQVHDGKNLKGRANDAIASAALYIACRQEGVPRTFKEICAVSKISKKEIGRCFKLILK 197
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + M RFC+ L L Q ATHI + R+PIS++AAAI
Sbjct: 198 ALETS--VDLITTGDFMSRFCSNLGLPNMVQRAATHIARKAVELDIVPGRSPISVAAAAI 255
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q D ++ Q EI I G+ +VT+R+ YK + + L P ++
Sbjct: 256 YMASQASDDKRVQKEIGDIAGVADVTIRQSYKLMYPHATKLFPEDF 301
[66][TOP]
>UniRef100_B4NZP8 GE18945 n=1 Tax=Drosophila yakuba RepID=B4NZP8_DROYA
Length = 315
Score = 101 bits (251), Expect = 3e-20
Identities = 58/166 (34%), Positives = 94/166 (56%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ RS +A A+ACL A R+ PRT +EI + + +KEIG+ K+ +
Sbjct: 140 LFKQVHDGKNLKGRSNDAKASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCFKLTLK 199
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + + M RFC L L Q ATHI + + R+PIS++AAAI
Sbjct: 200 ALETS--VDLITTADFMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAI 257
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q + +++Q +I I G+ +VT+R+ YK + + L P ++
Sbjct: 258 YMASQASEHKRSQKDIGDIAGVADVTIRQSYKLMYPHAAKLFPEDF 303
[67][TOP]
>UniRef100_B4JPZ0 GH13607 n=1 Tax=Drosophila grimshawi RepID=B4JPZ0_DROGR
Length = 315
Score = 101 bits (251), Expect = 3e-20
Identities = 58/166 (34%), Positives = 94/166 (56%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ RS +A ++ACL A R+ PRT +EI + + +KEIG+ K+ +
Sbjct: 140 LFKQVHDGKNLKGRSNDAKSSACLYIACRQEGVPRTFKEICAVSKISKKEIGRCFKLTLK 199
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + + M RFC L L Q ATHI + + R+PIS++AAAI
Sbjct: 200 ALETS--VDLITTADFMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAI 257
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q + +++Q EI I G+ +VT+R+ YK + + L P ++
Sbjct: 258 YMASQASEHKRSQKEIGDIAGVADVTIRQSYKLMYPHAAKLFPEDF 303
[68][TOP]
>UniRef100_Q5V5V1 Transcription initiation factor IIB n=1 Tax=Haloarcula marismortui
RepID=Q5V5V1_HALMA
Length = 319
Score = 101 bits (251), Expect = 3e-20
Identities = 54/157 (34%), Positives = 95/157 (60%), Gaps = 1/157 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R + +R RS+E +ATACL A R+ PR+L+E+S + V+QKEIG+ + + +
Sbjct: 161 IYRRALNEDLIRGRSIEGVATACLYAACRQEGIPRSLEEVSDVSRVEQKEIGRTYRYVAQ 220
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L+L +P++ ++PRF + L+L++ Q A I + + + ++P +AAA
Sbjct: 221 ELELKMEPVDPKQ---YVPRFASELELSEEVQSKANEIIDTTAEQGLLSGKSPTGYAAAA 277
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
IY A L +++KTQ E+ + +TEVT+R Y+E +E
Sbjct: 278 IYAASLLCNEKKTQREVADVAQVTEVTIRNRYQEQIE 314
[69][TOP]
>UniRef100_Q0W302 Transcription initiation factor IIB n=1 Tax=uncultured methanogenic
archaeon RC-I RepID=Q0W302_UNCMA
Length = 337
Score = 101 bits (251), Expect = 3e-20
Identities = 59/159 (37%), Positives = 86/159 (54%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R S +R RS+E +A A L A R+ PRTL EI+ + V +KEIG+ + +
Sbjct: 176 VYRKAVSKNLIRGRSIEGVAAAALYAACRQNGVPRTLDEIAEVSRVSRKEIGRTYRFISR 235
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L + S ++PRFC+ L L Q A I K + R P ++AAAI
Sbjct: 236 ELGLK--LMPTSPIDYVPRFCSGLSLKGEVQSKAVEILRQAAEKELTSGRGPTGVAAAAI 293
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
Y++ L +R+TQ E+ + G+TEVT+R YKEL E D
Sbjct: 294 YISSILCGERRTQREVANVAGVTEVTIRNRYKELAEELD 332
[70][TOP]
>UniRef100_C7DHA4 Transcription factor TFIIB cyclin-related n=1 Tax=Candidatus
Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHA4_9EURY
Length = 380
Score = 101 bits (251), Expect = 3e-20
Identities = 55/156 (35%), Positives = 88/156 (56%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
L+R C +R R +E + A + A R+A PRTL EI+ + + +KEIG+ + +
Sbjct: 219 LYRKCVQNNLIRGRPIETVVQAVIYAACRKAGMPRTLDEIATISGLPKKEIGRAYRAISH 278
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L P+ ++PR+ L+L+ AQE A + + K + R+P +SAAA+
Sbjct: 279 ELGLKIPLTDPI--AYVPRYVNALKLSGEAQEKAVELLNDAMAKGLVSGRSPTGVSAAAV 336
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
Y+A L +R+TQ E+ + G+TEVT+R Y+EL E
Sbjct: 337 YIAGALAGERRTQKEVADVAGVTEVTIRNRYRELKE 372
[71][TOP]
>UniRef100_C7NZL7 Transcription factor TFIIB cyclin-related n=1 Tax=Halomicrobium
mukohataei DSM 12286 RepID=C7NZL7_HALMD
Length = 317
Score = 100 bits (250), Expect = 4e-20
Identities = 54/157 (34%), Positives = 95/157 (60%), Gaps = 1/157 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E +AT+CL A R+ PR+L+E+S + V+QKEIG+ + + +
Sbjct: 159 IYRRALDEDLIRGRSIEGVATSCLYAACRQEGIPRSLEEVSDVSRVEQKEIGRTYRYVAQ 218
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L+L +P++ ++PRF + L+L++ Q A I +V + + ++P +AAA
Sbjct: 219 ELKLKMEPVDPKQ---YVPRFASELELSEEVQSKANEIIDVTAEQGLLSGKSPTGYAAAA 275
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
IY A L +++KTQ E+ + +TEVT+R Y+E +E
Sbjct: 276 IYAASLLCNEKKTQREVADVAQVTEVTIRNRYQEQIE 312
[72][TOP]
>UniRef100_A8X282 C. briggsae CBR-TTB-1 protein n=1 Tax=Caenorhabditis briggsae AF16
RepID=A8X282_CAEBR
Length = 306
Score = 100 bits (249), Expect = 5e-20
Identities = 59/167 (35%), Positives = 92/167 (55%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
++F+D + LR ++ EA A ACL A R+ PRT +EI + V +KEIG+ KI+
Sbjct: 130 RIFKDVLDSRALRGKNNEAQAAACLYIACRKDGVPRTFKEICAVSRVSKKEIGRCFKIII 189
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L+ + + + + M RFC L L S Q AT I + ++ R PISI+AAA
Sbjct: 190 RNLETN--LEQITSADFMSRFCGNLYLPNSIQAAATRIAKRAVDMDLVAGRTPISIAAAA 247
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
IY+A Q ++++ EI + G E+T+R+ YK L +L P ++
Sbjct: 248 IYMASQASGEKRSAKEIGDVAGAAEITVRQTYKLLYPKAAELFPEDF 294
[73][TOP]
>UniRef100_Q46CN8 Transcription initiation factor IIB (TFIIB) n=1 Tax=Methanosarcina
barkeri str. Fusaro RepID=Q46CN8_METBF
Length = 337
Score = 100 bits (249), Expect = 5e-20
Identities = 58/159 (36%), Positives = 84/159 (52%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E +A A L A R+ PRTL EI + V +KEIG+ + +
Sbjct: 176 VYRKAVDKNLIRGRSIEGVAAAALYAACRQCSVPRTLDEIEEVSRVSRKEIGRTYRFISR 235
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L + S ++PRFC+ L L Q + I K + R P ++AAAI
Sbjct: 236 ELALK--LMPTSPIDYVPRFCSGLNLKGEVQSKSVEILRQASEKELTSGRGPTGVAAAAI 293
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
Y+A L +R+TQ E+ + G+TEVT+R YKEL E D
Sbjct: 294 YIASILCGERRTQREVADVAGVTEVTIRNRYKELAEELD 332
[74][TOP]
>UniRef100_Q3IMH4 Transcription initiation factor TFB 8 n=1 Tax=Natronomonas
pharaonis DSM 2160 RepID=Q3IMH4_NATPD
Length = 325
Score = 100 bits (249), Expect = 5e-20
Identities = 56/157 (35%), Positives = 94/157 (59%), Gaps = 1/157 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E +ATA L A R+ PR+L+EIS + V++KEIG+ + + +
Sbjct: 166 IYRRALDDDLIRGRSIEGVATAALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQ 225
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L +P++ ++PRFC+ L+L++ Q A I E K + ++P +AAA
Sbjct: 226 ELGLEMEPVDPQK---YVPRFCSELELSEEVQSKAKDIIETTAEKGLLSGKSPTGYAAAA 282
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
IY A L +++KTQ E+ ++ +TEVT+R Y+E +E
Sbjct: 283 IYAASLLCNEKKTQREVAEVAQVTEVTIRNRYQEQIE 319
[75][TOP]
>UniRef100_Q12XC2 Transcription initiation factor IIB n=1 Tax=Methanococcoides
burtonii DSM 6242 RepID=Q12XC2_METBU
Length = 337
Score = 100 bits (249), Expect = 5e-20
Identities = 58/159 (36%), Positives = 83/159 (52%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E +A A L A R+ PRTL EI + V +KEIG+ + +
Sbjct: 176 VYRKAVDKNLIRGRSIEGVAAAALYAACRQCSVPRTLDEIGEVSRVSRKEIGRTYRFISR 235
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L + S ++PRFC+ L L Q I K + R P ++AAAI
Sbjct: 236 ELSLK--LMPTSPIDYVPRFCSGLNLKGEVQSRGVEILRQASEKELTSGRGPTGVAAAAI 293
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
Y+A L +R+TQ E+ + G+TEVT+R YKEL E D
Sbjct: 294 YIASILCGERRTQREVADVAGVTEVTIRNRYKELAEELD 332
[76][TOP]
>UniRef100_Q977U3 Transcription initiation factor IIB n=1 Tax=Methanosarcina mazei
RepID=TF2B_METMA
Length = 337
Score = 100 bits (249), Expect = 5e-20
Identities = 58/159 (36%), Positives = 84/159 (52%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E +A A L A R+ PRTL EI + V +KEIG+ + +
Sbjct: 176 VYRKAVDKNLIRGRSIEGVAAAALYAACRQCSVPRTLDEIEEVSRVSRKEIGRTYRFISR 235
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L + S ++PRFC+ L L Q + I K + R P ++AAAI
Sbjct: 236 ELALK--LMPTSPIDYVPRFCSGLNLKGEVQSKSVEILRQASEKELTSGRGPTGVAAAAI 293
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
Y+A L +R+TQ E+ + G+TEVT+R YKEL E D
Sbjct: 294 YIASILCGERRTQREVADVAGVTEVTIRNRYKELAEELD 332
[77][TOP]
>UniRef100_Q8TT29 Transcription initiation factor IIB n=1 Tax=Methanosarcina
acetivorans RepID=TF2B_METAC
Length = 337
Score = 100 bits (249), Expect = 5e-20
Identities = 58/159 (36%), Positives = 84/159 (52%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E +A A L A R+ PRTL EI + V +KEIG+ + +
Sbjct: 176 VYRKAVDKNLIRGRSIEGVAAAALYAACRQCSVPRTLDEIEEVSRVSRKEIGRTYRFISR 235
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L + S ++PRFC+ L L Q + I K + R P ++AAAI
Sbjct: 236 ELALK--LMPTSPIDYVPRFCSGLNLKGEVQSKSVEILRQASEKELTSGRGPTGVAAAAI 293
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
Y+A L +R+TQ E+ + G+TEVT+R YKEL E D
Sbjct: 294 YIASILCGERRTQREVADVAGVTEVTIRNRYKELAEELD 332
[78][TOP]
>UniRef100_A5UKA1 Transcription initiation factor IIB n=2 Tax=Methanobrevibacter
smithii RepID=TF2B_METS3
Length = 310
Score = 99.8 bits (247), Expect = 9e-20
Identities = 58/156 (37%), Positives = 85/156 (54%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E + A L A R PRTL EI+ + V +KE+G+ + L
Sbjct: 149 VYRSAVDNKLIRGRSIEGVVAASLYAACRRCNVPRTLDEIAEVSRVTKKEVGRTYRFLTR 208
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L + P S ++PRF + L L+ AQ A I E + K + R P ++AAA+
Sbjct: 209 ELNIKLP--PTSPVDYVPRFASELGLSGEAQSRAIEIIEKAMEKGLTSGRGPTGVAAAAL 266
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
Y+A L +RKTQ ++ I G+TEVT+R YKEL E
Sbjct: 267 YIASVLLGERKTQRDVADIAGVTEVTIRNRYKELTE 302
[79][TOP]
>UniRef100_Q3ISF4 Transcription initiation factor TFB 1 n=1 Tax=Natronomonas
pharaonis DSM 2160 RepID=Q3ISF4_NATPD
Length = 322
Score = 99.4 bits (246), Expect = 1e-19
Identities = 55/157 (35%), Positives = 93/157 (59%), Gaps = 1/157 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E +ATA L A R+ PR+L E++ A V+QKEIG+ + + +
Sbjct: 164 IYRRALDDDLIRGRSIEGVATAALYAACRQEGIPRSLDEVADVARVEQKEIGRTYRYIAQ 223
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L +P++ ++PRFC+ L L++ ++ I EV K + ++P +AAA
Sbjct: 224 ELSLGLEPVDPVQ---YVPRFCSELGLSEEVEQKTREIIEVTAEKGMLSGKSPTGYAAAA 280
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
IY A L +++KTQ E+ ++ +TEVT+R Y+E +E
Sbjct: 281 IYAASLLCNEKKTQREVAEVAQVTEVTIRNRYQEQIE 317
[80][TOP]
>UniRef100_C7NMT2 Transcription factor TFIIB cyclin-related n=1 Tax=Halorhabdus
utahensis DSM 12940 RepID=C7NMT2_HALUD
Length = 321
Score = 99.4 bits (246), Expect = 1e-19
Identities = 55/157 (35%), Positives = 93/157 (59%), Gaps = 1/157 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E +AT+ L A R+ PR+L+EIS + V++KEIG+ + + +
Sbjct: 162 IYRRALDDDLIRGRSIEGVATSALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQ 221
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L +P++ ++PRFC+ L+L++ Q A I E K + ++P +AAA
Sbjct: 222 ELGLEMEPVDPKK---YVPRFCSELELSEEVQSKANEIIETTAEKGLLSGKSPTGYAAAA 278
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
IY A L +++KTQ E+ + +TEVT+R Y+E +E
Sbjct: 279 IYAASLLCNEKKTQREVADVAQVTEVTIRNRYQEQIE 315
[81][TOP]
>UniRef100_B5IV88 TFIIB zinc-binding family n=1 Tax=Thermococcus barophilus MP
RepID=B5IV88_9EURY
Length = 306
Score = 99.4 bits (246), Expect = 1e-19
Identities = 57/156 (36%), Positives = 87/156 (55%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
L+R +R RS+E + ACL A R A+ PRTL EI A V +KEIG+ + +
Sbjct: 145 LYRKAVMERLIRGRSIEGVTAACLYAACRMAKVPRTLDEIEEVARVDKKEIGRSYRFIAR 204
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L + S ++ RF L L++ + A I + I + R P+ ++AAA+
Sbjct: 205 ELHLR--LTPTSPIDYVSRFADQLGLSERTKNRAVKILQKAIKLGLTSGRGPMGVAAAAL 262
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
Y+A LE ++KTQ E+ ++ +TEVT+R YKEL+E
Sbjct: 263 YIASVLEGEKKTQREVAEVAHVTEVTVRNRYKELVE 298
[82][TOP]
>UniRef100_A6UW60 Transcription initiation factor IIB n=1 Tax=Methanococcus aeolicus
Nankai-3 RepID=TF2B_META3
Length = 334
Score = 99.4 bits (246), Expect = 1e-19
Identities = 58/159 (36%), Positives = 88/159 (55%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
L+R +R RS+E +A A L A R + PRTL EI+ + V +KEIG+ + +
Sbjct: 173 LYRGAVEKGLIRGRSIEGVAAAALYAACRRCKVPRTLDEIAEMSRVDRKEIGRTYRFISR 232
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L++ + S ++PRF + L+L + A I + +K + R P ++AAAI
Sbjct: 233 ELKIR--LAPTSPIDYVPRFASELKLPGEVESKAISILQKAGDKGLTSGRGPTGVAAAAI 290
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
Y+A L RKTQ E+ + G+TEVT+R YKEL E+ D
Sbjct: 291 YIASVLHGTRKTQREVADVAGVTEVTIRNRYKELTEHLD 329
[83][TOP]
>UniRef100_Q8SRP3 Transcription initiation factor IIB n=1 Tax=Encephalitozoon
cuniculi RepID=TF2B_ENCCU
Length = 312
Score = 99.4 bits (246), Expect = 1e-19
Identities = 56/166 (33%), Positives = 97/166 (58%), Gaps = 1/166 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
+F++ L+ ++VE + AC+ A R+ + PRT +EIS+ VQ++EIG+ K++
Sbjct: 137 IFKNIEERKLLKGKNVEGIVAACIYIACRQEECPRTFKEISVMTAVQKREIGRCFKLISP 196
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L+ +++ +I + RFC+ L LN Q++AT I + ++P SI+AA I
Sbjct: 197 HLERMATMSTENI---IARFCSDLNLNIKIQKIATEIAKAAHELGCLAGKSPDSIAAAVI 253
Query: 365 YLACQL-EDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSN 499
Y+ L +++K Q +I +T +TEVT++ YKELL D++P N
Sbjct: 254 YMVTNLFPEEKKIQKDIQFVTNVTEVTIKNTYKELLTFKYDIIPEN 299
[84][TOP]
>UniRef100_O28970 Transcription initiation factor IIB n=1 Tax=Archaeoglobus fulgidus
RepID=TF2B_ARCFU
Length = 326
Score = 99.4 bits (246), Expect = 1e-19
Identities = 56/156 (35%), Positives = 88/156 (56%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E + A L A R+A PRTL EI+ + V +KEIG+ + +
Sbjct: 165 IYRKAVEKNLIRGRSIEGVVAAALYAACRQAGVPRTLDEIATYSRVDRKEIGRTYRFITR 224
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L + S + ++PRFC L L+ Q+ A I + + + R P ++AAA+
Sbjct: 225 ELGLK--LMPTSPADYIPRFCAALGLSGEVQKKAIEIIKKAEERELTSGRGPTGVAAAAL 282
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
Y+A L +R+TQ E+ ++ G+TEVT+R YKEL E
Sbjct: 283 YVASILLGERRTQREVAEVAGVTEVTIRNRYKELAE 318
[85][TOP]
>UniRef100_Q18KT7 Transcription initiation factor TFB n=1 Tax=Haloquadratum walsbyi
DSM 16790 RepID=Q18KT7_HALWD
Length = 329
Score = 98.6 bits (244), Expect = 2e-19
Identities = 55/157 (35%), Positives = 93/157 (59%), Gaps = 1/157 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R S +R RS+E ++T+ L A R+ PR+L+EIS + V++KEIG+ + + +
Sbjct: 170 IYRRALSEDLIRGRSIEGVSTSALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQ 229
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L +P++ ++PRFC+ L L+K Q A I E + + ++P +AAA
Sbjct: 230 ELGLEMRPVDPKK---YVPRFCSELDLSKEVQSKADEIIETTAEQGLLSGKSPTGYAAAA 286
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
IY A L +++KTQ E+ + +TEVT+R Y+E +E
Sbjct: 287 IYAASLLCNEKKTQREVADVAQVTEVTIRNRYQEQIE 323
[86][TOP]
>UniRef100_B5IA78 TFIIB zinc-binding family n=1 Tax=Aciduliprofundum boonei T469
RepID=B5IA78_9EURY
Length = 312
Score = 98.6 bits (244), Expect = 2e-19
Identities = 53/156 (33%), Positives = 90/156 (57%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E + A + A R PRTL+EIS ++++EIG+ +I+
Sbjct: 151 IYRKAVKENMIRGRSIEGVVAASIYAACRMLGIPRTLEEISTVTRIKKREIGRVYRIMSR 210
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L+L+ I ++ RFC+ L+L+ ++ A I ++ + + R P ++AAAI
Sbjct: 211 TLKLN--IYPTKPEDYIDRFCSKLKLSGEVKKKAYEIIKMARERDIISGRGPTGVAAAAI 268
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
Y+A L +R+TQ E+ ++ G+TEVT+R YKEL E
Sbjct: 269 YIAAILMGERRTQREVAEVAGVTEVTIRNRYKELAE 304
[87][TOP]
>UniRef100_A0B5T8 Transcription initiation factor IIB n=1 Tax=Methanosaeta
thermophila PT RepID=TF2B_METTP
Length = 337
Score = 98.6 bits (244), Expect = 2e-19
Identities = 57/156 (36%), Positives = 83/156 (53%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E +A A L A R+ PRTL EI+ + V +KEIG+ + +
Sbjct: 176 IYRRAVEKNLIRGRSIEGVAAAALYAACRQCNVPRTLDEIAEVSRVSRKEIGRTYRFVSR 235
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L + S ++PRFC+ L L Q I K + R P ++AAAI
Sbjct: 236 ELSLK--LMPTSPIDYIPRFCSGLNLKGDVQAKGIEILRQAAEKELTSGRGPTGVAAAAI 293
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
Y+A L + R+TQ E+ + G+TEVT+R YKEL E
Sbjct: 294 YIASILCNDRRTQREVADVAGVTEVTIRNRYKELAE 329
[88][TOP]
>UniRef100_A4G0F2 Transcription initiation factor IIB n=1 Tax=Methanococcus
maripaludis C5 RepID=TF2B_METM5
Length = 339
Score = 98.6 bits (244), Expect = 2e-19
Identities = 58/160 (36%), Positives = 87/160 (54%), Gaps = 1/160 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
L+R +R RS+E +A A L A R + PRTL EI+ + V +KEIG+ + +
Sbjct: 178 LYRGAVEKGLIRGRSIEGVAAAALYAACRRCKVPRTLDEIAEVSRVDRKEIGRTYRFISR 237
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L + P N ++PRF + L+L + A I + K + R P ++AAA
Sbjct: 238 ELNIRLAPTNPVD---YVPRFASELKLPGEVESKAISILQKAGEKGLTSSRGPTGVAAAA 294
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
IY+A L+ R+TQ E+ + G+TEVT+R YKEL E+ D
Sbjct: 295 IYIASVLQGTRRTQREVADVAGVTEVTIRNRYKELTEHLD 334
[89][TOP]
>UniRef100_UPI000155D43D PREDICTED: similar to general transcription factor IIB, partial n=1
Tax=Ornithorhynchus anatinus RepID=UPI000155D43D
Length = 544
Score = 98.2 bits (243), Expect = 3e-19
Identities = 54/156 (34%), Positives = 91/156 (58%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ R +A+A+ACL A R+ PRT +EI + + +KEIG+ K++ +
Sbjct: 275 LFKQVYEQKSLKGRCNDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILK 334
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + M RFC+ L L K Q ATHI + R+PIS++AAAI
Sbjct: 335 ALETS--VDLITTGDFMSRFCSNLGLPKQVQMAATHIARKAVEIDLVPGRSPISVAAAAI 392
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
Y+A Q +++TQ EIC ++ +++ + + +K +L+
Sbjct: 393 YMASQASTEKRTQKEICAVSRISKKEIGRCFKLILK 428
Score = 95.1 bits (235), Expect = 2e-18
Identities = 54/153 (35%), Positives = 89/153 (58%)
Frame = +2
Query: 44 RSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGEALQLSQPINSNSI 223
RS ++A A + A + + E RT +EI + + +KEIG+ K++ +AL+ S ++ +
Sbjct: 382 RSPISVAAAAIYMASQASTEKRTQKEICAVSRISKKEIGRCFKLILKALETS--VDLITT 439
Query: 224 SVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQ 403
M RFC+ L L K Q ATHI + R+PIS++AAAIY+A Q +++TQ
Sbjct: 440 GDFMSRFCSNLGLPKQVQMAATHIARKAVEIDLVPGRSPISVAAAAIYMASQASTEKRTQ 499
Query: 404 AEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
EI I G+ +VT+R+ Y+ + DL P+++
Sbjct: 500 KEIGDIAGVADVTIRQSYRLIYPRAPDLFPADF 532
[90][TOP]
>UniRef100_Q9P9I7 Transcription initiation factor IIB n=1 Tax=Methanothermococcus
thermolithotrophicus RepID=TF2B_METTL
Length = 339
Score = 98.2 bits (243), Expect = 3e-19
Identities = 58/159 (36%), Positives = 88/159 (55%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
L+R +R RS+E +A A L A R + PRTL EI+ + V +KEIG+ + +
Sbjct: 178 LYRGAVEKGLIRGRSIEGVAAAALYAACRRCKVPRTLDEIAEGSRVDRKEIGRTYRFISR 237
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L + + +N I ++PRF + L+L + A I + K + R P ++AAAI
Sbjct: 238 ELNI-RLTPTNPID-YVPRFASELKLPGEVESKAISILQKANEKGLTSGRGPTGVAAAAI 295
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
Y+A L R+TQ E+ + G+TEVT+R YKEL E+ D
Sbjct: 296 YIASVLHGTRRTQREVADVAGVTEVTIRNRYKELTEHLD 334
[91][TOP]
>UniRef100_A6VI28 Transcription initiation factor IIB n=1 Tax=Methanococcus
maripaludis C7 RepID=TF2B_METM7
Length = 339
Score = 98.2 bits (243), Expect = 3e-19
Identities = 58/160 (36%), Positives = 87/160 (54%), Gaps = 1/160 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
L+R +R RS+E +A A L A R + PRTL EI+ + V +KEIG+ + +
Sbjct: 178 LYRGAVEKGLIRGRSIEGVAAAALYAACRRCKVPRTLDEIAEVSRVDRKEIGRTYRFISR 237
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L + P N ++PRF + L+L + A I + K + R P ++AAA
Sbjct: 238 ELNIRLAPTNPVD---YVPRFASELKLPGEVESKAISILQKAGEKGLTSGRGPTGVAAAA 294
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
IY+A L+ R+TQ E+ + G+TEVT+R YKEL E+ D
Sbjct: 295 IYIASVLQGTRRTQREVADVAGVTEVTIRNRYKELTEHLD 334
[92][TOP]
>UniRef100_A9A8Q0 Transcription initiation factor IIB n=1 Tax=Methanococcus
maripaludis C6 RepID=TF2B_METM6
Length = 339
Score = 98.2 bits (243), Expect = 3e-19
Identities = 58/160 (36%), Positives = 87/160 (54%), Gaps = 1/160 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
L+R +R RS+E +A A L A R + PRTL EI+ + V +KEIG+ + +
Sbjct: 178 LYRGAVEKGLIRGRSIEGVAAAALYAACRRCKVPRTLDEIAEVSRVDRKEIGRTYRFISR 237
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L + P N ++PRF + L+L + A I + K + R P ++AAA
Sbjct: 238 ELNIRLAPTNPVD---YVPRFASELKLPGEVESKAISILQKAGEKGLTSGRGPTGVAAAA 294
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
IY+A L+ R+TQ E+ + G+TEVT+R YKEL E+ D
Sbjct: 295 IYIASVLQGTRRTQREVADVAGVTEVTIRNRYKELTEHLD 334
[93][TOP]
>UniRef100_A6UR19 Transcription factor TFIIB cyclin-related n=1 Tax=Methanococcus
vannielii SB RepID=A6UR19_METVS
Length = 339
Score = 97.4 bits (241), Expect = 5e-19
Identities = 57/159 (35%), Positives = 89/159 (55%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
L+R +R RS+E +A A L A R + PRTL EI+ + V +KEIG+ + +
Sbjct: 178 LYRGAVEKGLIRGRSIEGVAAAALYAACRRCKVPRTLDEIAEVSRVDRKEIGRTYRFISR 237
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L + + +N I ++PRF + L+L + A I + + + R P ++AAAI
Sbjct: 238 ELNI-RLAPTNPID-YVPRFASELKLPGEVESKAISILQKAGERGLTSGRGPTGVAAAAI 295
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
Y+A L+ R+TQ E+ + G+TEVT+R YKEL E+ D
Sbjct: 296 YIASVLQGTRRTQREVADVAGVTEVTIRNRYKELTEHLD 334
[94][TOP]
>UniRef100_A8TD60 Transcription factor TFIIB cyclin-related n=1 Tax=Methanococcus
voltae A3 RepID=A8TD60_METVO
Length = 337
Score = 97.4 bits (241), Expect = 5e-19
Identities = 58/160 (36%), Positives = 87/160 (54%), Gaps = 1/160 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
L+R +R RS+E +A A L A R + PRTL EI+ + V +KEIG+ + +
Sbjct: 176 LYRGAVEKGLIRGRSIEGVAAAALYAACRRCKVPRTLDEIAEVSRVDRKEIGRTYRFISR 235
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L + P N ++PRF + L+L + A I + K + R P ++AAA
Sbjct: 236 ELNIRLAPTNPVD---YVPRFASELKLPGEVESKAISILKDAGKKGLTSGRGPTGVAAAA 292
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
IY+A L+ R+TQ E+ + G+TEVT+R YKEL E+ D
Sbjct: 293 IYIASVLQGTRRTQREVADVAGVTEVTIRNRYKELTEHLD 332
[95][TOP]
>UniRef100_O26971 Transcription initiation factor IIB n=1 Tax=Methanothermobacter
thermautotrophicus str. Delta H RepID=TF2B_METTH
Length = 310
Score = 97.4 bits (241), Expect = 5e-19
Identities = 55/159 (34%), Positives = 86/159 (54%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E + A L A R+ PRTL EI+ + V +KE+G+ + L
Sbjct: 149 VYRRAVENKLIRGRSIEGVVAASLYAACRKCNVPRTLDEIAEVSRVSKKEVGRTYRFLTR 208
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L + P S ++PRF + L L+ Q A I E+ + + R P ++AAA+
Sbjct: 209 ELNIKLP--PTSPVDYVPRFASELGLSGEVQSKAIEIIEMAMENGLTSGRGPTGVAAAAL 266
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
Y+A L + KTQ ++ ++ G+TEVT+R YKEL E D
Sbjct: 267 YIASVLLGEHKTQRDVAEVAGVTEVTIRNRYKELTEQLD 305
[96][TOP]
>UniRef100_Q9HSF7 Transcription initiation factor IIB 7 n=2 Tax=Halobacterium
salinarum RepID=TF2B7_HALSA
Length = 323
Score = 97.4 bits (241), Expect = 5e-19
Identities = 54/157 (34%), Positives = 92/157 (58%), Gaps = 1/157 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E +AT+ L A R+ PR+L+EIS + V++KEIG+ + + +
Sbjct: 164 IYRRALKEDLIRGRSIEGVATSALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQ 223
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L +P++ ++PRFC+ L+L + Q A I E + + ++P +AAA
Sbjct: 224 ELGLEMKPVDPKK---YVPRFCSELELTEEVQSKANEIIETTAEEGLLSGKSPTGYAAAA 280
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
IY A L +++KTQ E+ + +TEVT+R Y+E +E
Sbjct: 281 IYAASLLCNEKKTQREVADVAQVTEVTIRNRYQEQIE 317
[97][TOP]
>UniRef100_UPI000038E008 transcription initiation factor IIB n=1 Tax=Ferroplasma acidarmanus
fer1 RepID=UPI000038E008
Length = 311
Score = 97.1 bits (240), Expect = 6e-19
Identities = 53/156 (33%), Positives = 90/156 (57%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E + + A R PRTL EI+ V++KEIG+ +I+
Sbjct: 150 IYRKAVKQNMIRGRSIEGVVAGSIYAACRITNVPRTLDEIASVTRVKKKEIGRTYRIMAR 209
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L+L+ I + ++ RFC+ L+L+ A++ A I ++ I+ + + P ++AAAI
Sbjct: 210 YLKLN--ILPSKPDDYVNRFCSKLRLSMEARKRAEEILKMAIDNDLTSGKGPTGVAAAAI 267
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
Y+A + +R+TQ I ++ G+TEVT+R YKEL E
Sbjct: 268 YIASLITGERRTQRAIAEVAGVTEVTIRNRYKELTE 303
[98][TOP]
>UniRef100_Q6KZC9 Transcription initiation factor IIB n=1 Tax=Picrophilus torridus
RepID=Q6KZC9_PICTO
Length = 310
Score = 97.1 bits (240), Expect = 6e-19
Identities = 52/156 (33%), Positives = 90/156 (57%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E + + A R PRTL EI+ V++KEIG+ +I+
Sbjct: 149 IYRKAVKQNMIRGRSIEGVVAGSIYAACRITNVPRTLDEIASVTRVKKKEIGRTYRIMAR 208
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L+L+ I + ++ RFC+ L+L+ A++ A I ++ ++ + + P ++AAAI
Sbjct: 209 YLKLN--IMPSKPEDYVNRFCSKLRLSMEARKRAEEILKMAVDNDLTSGKGPTGVAAAAI 266
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
Y+A + +R+TQ I ++ G+TEVT+R YKEL E
Sbjct: 267 YIASLITGERRTQRAIAEVAGVTEVTIRNRYKELTE 302
[99][TOP]
>UniRef100_C9REA0 Transcription factor TFIIB cyclin-releated protein n=1
Tax=Methanocaldococcus vulcanius M7 RepID=C9REA0_9EURY
Length = 666
Score = 97.1 bits (240), Expect = 6e-19
Identities = 57/159 (35%), Positives = 88/159 (55%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R+ +R RS+E + A + A R + PRTL EI+ A+ V +KEIG+ + L
Sbjct: 505 IYRNAVEKGLIRGRSIEGVVAAAIYAACRRCRVPRTLDEIAEASRVDRKEIGRTYRFLAR 564
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L + +N I ++PRF + L L + A I + K + R P ++AAAI
Sbjct: 565 ELNIKLT-PTNPID-YVPRFASELGLPGEVESKAIQILQQATEKGLTSGRGPTGVAAAAI 622
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
Y+A L R+TQ E+ ++ G+TEVT+R YKEL E+ D
Sbjct: 623 YIASVLLGCRRTQREVAEVAGVTEVTIRNRYKELTEHLD 661
[100][TOP]
>UniRef100_Q2NEL6 Transcription initiation factor IIB n=1 Tax=Methanosphaera
stadtmanae DSM 3091 RepID=TF2B_METST
Length = 311
Score = 97.1 bits (240), Expect = 6e-19
Identities = 56/159 (35%), Positives = 86/159 (54%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R+ +R RS+E + A L A R + PRTL EI+ + V +KE+G+ + L
Sbjct: 150 VYRNAVENKLIRGRSIEGVVAASLYAACRRCKVPRTLDEIADVSRVSKKEVGRTYRFLTR 209
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L + P S ++PRF + L L+ Q A I ++ + R P ++AAA+
Sbjct: 210 ELHIRLP--PTSPIDYVPRFASELNLSGVVQSKAIEIINQAMDNGLTSGRGPTGVAAAAL 267
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
Y+A L +RKTQ ++ I G+TEVT+R YKEL E D
Sbjct: 268 YIASVLLGERKTQRDVADIAGVTEVTIRNRYKELTEQLD 306
[101][TOP]
>UniRef100_Q6M176 Transcription initiation factor IIB n=1 Tax=Methanococcus
maripaludis RepID=TF2B_METMP
Length = 339
Score = 97.1 bits (240), Expect = 6e-19
Identities = 57/160 (35%), Positives = 87/160 (54%), Gaps = 1/160 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
L+R +R RS+E +A A L A R + PRTL EI+ + V +KEIG+ + +
Sbjct: 178 LYRGAVEKGLIRGRSIEGVAAAALYAACRRCKVPRTLDEIAEVSRVDRKEIGRTYRFISR 237
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L + P N ++PRF + L+L + A I + + + R P ++AAA
Sbjct: 238 ELNIRLAPTNPVD---YVPRFASELKLPGEVESKAISILQKAGERGLTSGRGPTGVAAAA 294
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
IY+A L+ R+TQ E+ + G+TEVT+R YKEL E+ D
Sbjct: 295 IYIASVLQGTRRTQREVADVAGVTEVTIRNRYKELTEHLD 334
[102][TOP]
>UniRef100_Q3IN04 Transcription initiation factor TFB 6 n=1 Tax=Natronomonas
pharaonis DSM 2160 RepID=Q3IN04_NATPD
Length = 329
Score = 96.7 bits (239), Expect = 8e-19
Identities = 54/155 (34%), Positives = 89/155 (57%)
Frame = +2
Query: 8 FRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGEA 187
+R +R RS+E ATA L A R+ PR+L E++ A V+QKEIG+ + L +
Sbjct: 172 YRRALDEDLIRGRSIEGAATATLYAACRQESIPRSLDEVAEVARVEQKEIGRTYRYLSQE 231
Query: 188 LQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIY 367
L L I ++PRFC+ L L+++ ++ I +V + + ++P +AAAIY
Sbjct: 232 LGLE--IKPADPKEYVPRFCSELALSEAVEQKTREIIDVTAEEGMLSGKSPTGYAAAAIY 289
Query: 368 LACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
A L +++KTQ E+ ++ +TEVT+R Y+E +E
Sbjct: 290 AASLLCNEKKTQREVAEVAQVTEVTIRNRYQEQIE 324
[103][TOP]
>UniRef100_C1V5C9 Transcription initiation factor IIB (TFIIB) n=1 Tax=Halogeometricum
borinquense DSM 11551 RepID=C1V5C9_9EURY
Length = 327
Score = 96.7 bits (239), Expect = 8e-19
Identities = 55/157 (35%), Positives = 92/157 (58%), Gaps = 1/157 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R + +R RS+E +AT+ L A R+ PR+L+EIS + V++KEIG+ + + +
Sbjct: 168 IYRRALNEDLIRGRSIEGVATSALYAACRKEGIPRSLEEISDVSRVERKEIGRTYRYISQ 227
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L +P++ ++PRF + L L+K Q A I E K + ++P +AAA
Sbjct: 228 ELGLEMKPVDPKK---YVPRFSSELDLSKEVQSKANEIIETTAEKGLLSGKSPTGYAAAA 284
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
IY A L +++KTQ E+ + +TEVT+R Y+E +E
Sbjct: 285 IYAASLLCNEKKTQREVADVAQVTEVTIRNRYQEQIE 321
[104][TOP]
>UniRef100_B9ZEE4 Transcription factor TFIIB cyclin-related n=1 Tax=Natrialba magadii
ATCC 43099 RepID=B9ZEE4_NATMA
Length = 320
Score = 96.7 bits (239), Expect = 8e-19
Identities = 54/157 (34%), Positives = 93/157 (59%), Gaps = 1/157 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E +AT+ L A R+ PR+L+EIS + V++KEIG+ + + +
Sbjct: 161 IYRRALKEDLIRGRSIEGVATSALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQ 220
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L +P++ ++PRFC+ L+L++ Q A I E + + ++P +AAA
Sbjct: 221 ELGLEMRPVDPKK---YVPRFCSELELSEEVQTKANEIIEKTAEEGLLSGKSPTGYAAAA 277
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
IY A L +++KTQ E+ + +TEVT+R Y+E +E
Sbjct: 278 IYAASLLCNEKKTQREVADVAQVTEVTIRNRYQEQIE 314
[105][TOP]
>UniRef100_Q9HHK5 Transcription initiation factor IIB 3 n=2 Tax=Halobacterium
salinarum RepID=TF2B3_HALSA
Length = 317
Score = 96.7 bits (239), Expect = 8e-19
Identities = 53/156 (33%), Positives = 88/156 (56%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E +ATACL A R+ PRTL+E++ A + QKEIG+ + + +
Sbjct: 158 IYRRALKEDLIRGRSIEGVATACLYAACRQEGIPRTLEEVTEVARIDQKEIGRTYRYVAQ 217
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L I ++PRF + L+L++ A I + + + ++P +AAAI
Sbjct: 218 ELSLE--IQPTDPKEYLPRFASDLELSEEVIAKAREIIDTSAEQGLLSGKSPSGFAAAAI 275
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
Y A L +++KTQ E+ + +TEVT+R Y+E +E
Sbjct: 276 YAASLLCNEKKTQREVANVANVTEVTIRNRYQEQIE 311
[106][TOP]
>UniRef100_Q6KZC7 Transcription initiation factor IIB n=1 Tax=Picrophilus torridus
RepID=Q6KZC7_PICTO
Length = 304
Score = 96.3 bits (238), Expect = 1e-18
Identities = 55/158 (34%), Positives = 92/158 (58%), Gaps = 4/158 (2%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E++ A + A R+ PRTL EIS AA++ +K+IGK + L +
Sbjct: 144 IYRKAVERNLIRGRSIESIVCAAIYAACRQVNIPRTLDEISKAADINKKKIGKAYRHLAK 203
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKS----AQELATHIGEVVINKCFCTRRNPISIS 352
L+L+ + + ++ +FC L L+K ++E+ + E I+ + P ++
Sbjct: 204 ELKLN--LKPTTPYSYVSQFCNKLNLDKDVIIKSEEIIRRVNETGIS----AGKGPTGVA 257
Query: 353 AAAIYLACQLEDKRKTQAEICKITGLTEVTLRKVYKEL 466
AAAIY+A + K KTQ EI K++G+TEVT+R YKE+
Sbjct: 258 AAAIYIAAIISGKPKTQKEISKVSGVTEVTIRNRYKEI 295
[107][TOP]
>UniRef100_B9LNZ5 Transcription factor TFIIB cyclin-related n=1 Tax=Halorubrum
lacusprofundi ATCC 49239 RepID=B9LNZ5_HALLT
Length = 317
Score = 96.3 bits (238), Expect = 1e-18
Identities = 54/157 (34%), Positives = 92/157 (58%), Gaps = 1/157 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R + +R RS+E ++TA L A R+ PR+L E++ + V QKEIG+ + + +
Sbjct: 159 IYRRALNEDLIRGRSIEGVSTAALYAACRQEGIPRSLDEVADVSRVPQKEIGRTYRYISQ 218
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L +P++ +PRF + LQL++ Q AT I +V + + ++P +AAA
Sbjct: 219 ELGLELKPVDPKQF---VPRFASALQLSEEVQSKATEIIDVSAEQGLLSGKSPTGFAAAA 275
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
IY A L +++KTQ E+ + +TEVT+R Y+E +E
Sbjct: 276 IYAASLLCNEKKTQREVADVAQVTEVTIRNRYQEQIE 312
[108][TOP]
>UniRef100_C5U6X1 Transcription factor TFIIB cyclin-related protein n=1
Tax=Methanocaldococcus infernus ME RepID=C5U6X1_9EURY
Length = 320
Score = 96.3 bits (238), Expect = 1e-18
Identities = 57/159 (35%), Positives = 89/159 (55%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
L+R+ +R RS+E + A + A R+ + PRTL EI+ + V +KEIG+ + L
Sbjct: 159 LYREAVRKGLIRGRSIEGVVAATIYAACRKYRVPRTLDEIAEVSRVDKKEIGRTYRFLAR 218
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L++ +N I ++PRF + L L + A I + K + R P ++AAAI
Sbjct: 219 ELKIKLA-PTNPID-YVPRFASELGLPGEVESKAIQILKKAAEKGLTSGRGPTGVAAAAI 276
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
Y+A L R+TQ E+ ++ G+TEVT+R YKEL E+ D
Sbjct: 277 YIASVLLGHRRTQREVAEVAGVTEVTIRNRYKELTEHLD 315
[109][TOP]
>UniRef100_Q58192 Endonuclease Mja Tfb n=1 Tax=Methanocaldococcus jannaschii
RepID=TF2B_METJA
Length = 673
Score = 96.3 bits (238), Expect = 1e-18
Identities = 57/159 (35%), Positives = 87/159 (54%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E + A + A R + PRTL EI+ A+ V +KEIG+ + L
Sbjct: 512 IYRGAVEKGLIRGRSIEGVVAAAIYAACRRCRVPRTLDEIAEASRVDRKEIGRTYRFLAR 571
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L + +N I ++PRF + L L + A I + K + R P ++AAAI
Sbjct: 572 ELNIKLT-PTNPID-YVPRFASELGLPGEVESKAIQILQQAAEKGLTSGRGPTGVAAAAI 629
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
Y+A L R+TQ E+ ++ G+TEVT+R YKEL E+ D
Sbjct: 630 YIASVLLGCRRTQREVAEVAGVTEVTIRNRYKELTEHLD 668
[110][TOP]
>UniRef100_B9LS68 Transcription factor TFIIB cyclin-related n=1 Tax=Halorubrum
lacusprofundi ATCC 49239 RepID=B9LS68_HALLT
Length = 333
Score = 95.9 bits (237), Expect = 1e-18
Identities = 54/157 (34%), Positives = 93/157 (59%), Gaps = 1/157 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R + +R RS+E ++TA L A R+ PR+L+EIS + V++KEIG+ + + +
Sbjct: 174 IYRRALNEDLIRGRSIEGVSTAALYAACRKEGIPRSLEEISDVSRVERKEIGRTYRYISQ 233
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L +P++ ++PRF + L+L++ Q A I E K + ++P +AAA
Sbjct: 234 ELGLEMRPVDPKK---YVPRFSSELELSEEVQSKANEIIETTAEKGLLSGKSPTGYAAAA 290
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
IY A L +++KTQ E+ + +TEVT+R Y+E +E
Sbjct: 291 IYAASLLCNEKKTQREVADVAQVTEVTIRNRYQEQIE 327
[111][TOP]
>UniRef100_C7P8F9 Transcription factor TFIIB cyclin-related n=1
Tax=Methanocaldococcus fervens AG86 RepID=C7P8F9_METFA
Length = 331
Score = 95.9 bits (237), Expect = 1e-18
Identities = 56/159 (35%), Positives = 87/159 (54%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E + A + A R + PRTL EI+ A+ V +KEIG+ + L
Sbjct: 170 IYRGAVEKGLIRGRSIEGVVAAAIYAACRRCRVPRTLDEIAEASRVDRKEIGRTYRFL-- 227
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
A +L + + ++PRF + L L + A I + K + R P ++AAAI
Sbjct: 228 ARELGIKLTPTNPIDYVPRFASELGLPGEVESKAIQILQQAAEKGLTSGRGPTGVAAAAI 287
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
Y+A L R+TQ E+ ++ G+TEVT+R YKEL E+ D
Sbjct: 288 YIASVLLGCRRTQREVAEVAGVTEVTIRNRYKELTEHLD 326
[112][TOP]
>UniRef100_Q3SBA6 Archaeal transcriptional initiation factor TFB n=1 Tax=uncultured
euryarchaeote Alv-FOS5 RepID=Q3SBA6_9EURY
Length = 474
Score = 95.5 bits (236), Expect = 2e-18
Identities = 53/154 (34%), Positives = 88/154 (57%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
L+R +R R +E++ A + R+ PRTL EIS + + +KEIG+ + L +
Sbjct: 312 LYRKAVEKGLIRGRLIESVVAAVIYMICRQYGIPRTLDEISEVSGITKKEIGRTYRFLKK 371
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L + P+ +N I ++PRF + L L+ QE A I + K + R P ++AAA+
Sbjct: 372 ELYVDVPL-TNPI-YYVPRFASALGLSGKVQEKAKEILNEAVEKGLISGRGPTGVAAAAV 429
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKEL 466
Y+A + +R+TQ E+ ++ G+TEVT+R Y+EL
Sbjct: 430 YIASVMMGERRTQKEVAEVAGVTEVTIRNRYREL 463
[113][TOP]
>UniRef100_C4QEJ3 Transcription initiation factor iib, putative n=2 Tax=Schistosoma
mansoni RepID=C4QEJ3_SCHMA
Length = 308
Score = 95.1 bits (235), Expect = 2e-18
Identities = 55/165 (33%), Positives = 87/165 (52%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ LR RS +A++TACL A R+ PRT +E+ + V +KEIGK K + +
Sbjct: 134 LFKQVHETKNLRGRSNDAVSTACLYMACRQEGVPRTFKEVCAVSRVSKKEIGKVFKKILK 193
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L+ + + S ++ M RFC L LN + Q +A + +N R+P+S++AAAI
Sbjct: 194 ILETN--VQSVTVEDFMSRFCGNLNLNIAVQRVANVVARRALNLNLVAGRSPVSVAAAAI 251
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSN 499
Y+A RK + EI + G E T+ Y+ + +L P +
Sbjct: 252 YMAAYALGYRKEKREIGDVAGCAEATITCTYRAMHSRASELFPED 296
[114][TOP]
>UniRef100_B6YWX5 Transcription initiation factor IIB n=1 Tax=Thermococcus onnurineus
NA1 RepID=B6YWX5_THEON
Length = 299
Score = 94.0 bits (232), Expect = 5e-18
Identities = 53/164 (32%), Positives = 93/164 (56%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
+L+R+ +R RS+E++ AC+ A R + PRTL EI+ + V +KEIG+ + +
Sbjct: 135 RLYREAVRKGLIRGRSIESVIAACVYAACRLLKVPRTLDEIADISRVDKKEIGRSFRFIA 194
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L+ + ++ +F L L++ + A I E K + ++P + AAA
Sbjct: 195 RNLNLTPKKLFVKPTDYVNKFADELGLSEKVRRRAIAILEEAYEKGLTSGKSPAGLVAAA 254
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLP 493
+Y+A LED+++TQ E+ ++ +TEVT+R YKEL+E + +P
Sbjct: 255 LYIAGLLEDEKRTQREVAEVARVTEVTVRNRYKELVEKLNLKIP 298
[115][TOP]
>UniRef100_Q9HJM2 Transcription initiation factor IIB 2 n=1 Tax=Thermoplasma
acidophilum RepID=TF2B2_THEAC
Length = 307
Score = 94.0 bits (232), Expect = 5e-18
Identities = 54/154 (35%), Positives = 88/154 (57%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E++ A + A R+ PRTL EIS A+ V +K+IGK + L +
Sbjct: 146 IYRKAVEKNLIRGRSIESIVCASIYAACRKVNIPRTLDEISKASEVNKKKIGKAYRHLAK 205
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L+ + + ++ +FC L L+K A ++ I ++ + + P I+AAAI
Sbjct: 206 ELDLN--LKPTTPFSYISQFCNKLDLDKQAIVISEDIVRQAMSMGISSGKGPTGIAAAAI 263
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKEL 466
Y+A K +TQ EI +I+G+TEVT+R YKE+
Sbjct: 264 YIASVKVGKPRTQKEIARISGVTEVTIRNRYKEI 297
[116][TOP]
>UniRef100_Q9HJM7 Transcription initiation factor IIB 1 n=1 Tax=Thermoplasma
acidophilum RepID=TF2B1_THEAC
Length = 312
Score = 94.0 bits (232), Expect = 5e-18
Identities = 52/156 (33%), Positives = 85/156 (54%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E + L A R PRTL EI+ V++KEIG+ +I+
Sbjct: 151 IYRKAVKQNMIRGRSIEGVVAGALYAACRITNVPRTLGEIASVTRVKKKEIGRTYRIMSR 210
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L+L+ I + ++ RFC+ L+L+ + A I N + + P ++AAAI
Sbjct: 211 YLKLN--IMPSKAEDYISRFCSKLKLSMDTRNKALEILRSAENAGLTSGKGPTGVAAAAI 268
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
Y+A + +R+TQ + ++ G+TEVT+R YKEL E
Sbjct: 269 YIASLMTGERRTQRAVAEVAGVTEVTIRNRYKELTE 304
[117][TOP]
>UniRef100_Q18J17 Transcription initiation factor TFB n=1 Tax=Haloquadratum walsbyi
DSM 16790 RepID=Q18J17_HALWD
Length = 317
Score = 93.6 bits (231), Expect = 7e-18
Identities = 53/157 (33%), Positives = 91/157 (57%), Gaps = 1/157 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R + +R RS+E +AT+ L A R+ PR+L E++ + V QKEIG+ + + +
Sbjct: 159 IYRRALNEDLIRGRSIEGVATSALYAACRQEGIPRSLDEVAEVSRVPQKEIGRTYRYISQ 218
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L +P++ +PRF + L L++ Q AT I +V + + ++P +AAA
Sbjct: 219 ELGLELRPVDPKQF---VPRFSSSLHLSEEVQSKATEIIDVSAEQGLLSGKSPTGFAAAA 275
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
IY A L +++KTQ E+ + +TEVT+R Y+E +E
Sbjct: 276 IYAASLLCNEKKTQREVADVAQVTEVTIRNRYQEQIE 312
[118][TOP]
>UniRef100_O59151 Transcription initiation factor IIB n=1 Tax=Pyrococcus horikoshii
RepID=TF2B_PYRHO
Length = 300
Score = 93.6 bits (231), Expect = 7e-18
Identities = 52/157 (33%), Positives = 90/157 (57%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
+L+R+ +R RS+E++ AC+ A R + PRTL EIS A V++KEIG+ + +
Sbjct: 135 RLYREAVRKGLIRGRSIESVIAACVYAACRLLKVPRTLDEISDIARVEKKEIGRSYRFIA 194
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L+ + ++ +F L L++ + A I E + + ++P + AAA
Sbjct: 195 RNLNLTPKKLFVKPTDYVNKFADELGLSEKVRRRAIEILEEAYRRGLTSGKSPAGLVAAA 254
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
+Y+A LE +++TQ E+ ++ +TEVT+R YKEL+E
Sbjct: 255 LYIASLLEGEKRTQREVAEVARVTEVTVRNRYKELVE 291
[119][TOP]
>UniRef100_Q9V0V5 Transcription initiation factor IIB n=1 Tax=Pyrococcus abyssi
RepID=TF2B_PYRAB
Length = 300
Score = 93.6 bits (231), Expect = 7e-18
Identities = 52/157 (33%), Positives = 90/157 (57%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
+L+R+ +R RS+E++ AC+ A R + PRTL EIS A V++KEIG+ + +
Sbjct: 135 RLYREAVRKGLIRGRSIESVIAACVYAACRLLKVPRTLDEISDIARVEKKEIGRSYRFIA 194
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L+ + ++ +F L L++ + A I E + + ++P + AAA
Sbjct: 195 RNLNLTPKKLFVKPTDYVNKFADELGLSEKVRRRAIEILEEAYKRGLTSGKSPAGLVAAA 254
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
+Y+A LE +++TQ E+ ++ +TEVT+R YKEL+E
Sbjct: 255 LYIASLLEGEKRTQREVAEVARVTEVTVRNRYKELVE 291
[120][TOP]
>UniRef100_C1V8T9 Transcription initiation factor IIB (TFIIB) n=1 Tax=Halogeometricum
borinquense DSM 11551 RepID=C1V8T9_9EURY
Length = 317
Score = 93.2 bits (230), Expect = 9e-18
Identities = 53/157 (33%), Positives = 91/157 (57%), Gaps = 1/157 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R + +R RS+E +AT+ L A R+ PR+L E++ + V QKEIG+ + + +
Sbjct: 159 IYRRALNEDLIRGRSIEGVATSALYAACRQEGIPRSLDEVAEVSRVPQKEIGRTYRYISQ 218
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L +P++ +PRF + L L++ Q AT I +V + + ++P +AAA
Sbjct: 219 ELGLELKPVDPKQF---VPRFASALGLSEEVQAKATEIIDVSAEQGLLSGKSPTGFAAAA 275
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
IY A L +++KTQ E+ + +TEVT+R Y+E +E
Sbjct: 276 IYAASLLCNEKKTQREVADVAQVTEVTIRNRYQEQIE 312
[121][TOP]
>UniRef100_B9ZI51 Transcription factor TFIIB cyclin-related n=1 Tax=Natrialba magadii
ATCC 43099 RepID=B9ZI51_NATMA
Length = 321
Score = 93.2 bits (230), Expect = 9e-18
Identities = 54/154 (35%), Positives = 86/154 (55%), Gaps = 1/154 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
L+R +R RS+E +AT+ L A R PR+L EI+ + V++ EIG+ + + +
Sbjct: 162 LYRRALEEDLIRGRSIEGVATSTLYAACRMEGIPRSLDEIAAVSRVERMEIGRTYRYISK 221
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L QP++ ++PRFC+ L+L Q A I + K + ++P +AAA
Sbjct: 222 ELGLEMQPVDPKK---YVPRFCSELELPDEVQSKANEIIDTTAEKGMLSGKSPTGYAAAA 278
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKE 463
IY A L +K+KTQ E+ + +TEVT+R Y+E
Sbjct: 279 IYAAALLCNKKKTQREVADVAQVTEVTIRNRYQE 312
[122][TOP]
>UniRef100_B5IT42 TFIIB zinc-binding family n=1 Tax=Thermococcus barophilus MP
RepID=B5IT42_9EURY
Length = 299
Score = 93.2 bits (230), Expect = 9e-18
Identities = 51/157 (32%), Positives = 90/157 (57%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
+L+R+ +R RS+E++ AC+ A R + PRTL EI+ A V +KEIG+ + +
Sbjct: 135 RLYREAVRRGLIRGRSIESVIAACVYAACRLLKIPRTLDEIADIARVDKKEIGRSFRFIA 194
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L+ + ++ +F L L++ + A + E N+ + ++P + AAA
Sbjct: 195 RNLNLTPKKLFVKPTDYVNKFADELGLSEKVRRRAIELLEEAYNRGLTSGKSPAGLVAAA 254
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
+Y+A LE +++TQ E+ ++ +TEVT+R YKEL+E
Sbjct: 255 LYIASLLEGEKRTQREVAEVARVTEVTVRNRYKELVE 291
[123][TOP]
>UniRef100_Q979Q3 Transcription initiation factor IIB 1 n=1 Tax=Thermoplasma
volcanium RepID=TF2B1_THEVO
Length = 312
Score = 93.2 bits (230), Expect = 9e-18
Identities = 52/156 (33%), Positives = 85/156 (54%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E + L A R PRTL EI+ V++KEIG+ +I+
Sbjct: 151 IYRKAVKQNMIRGRSIEGVVAGALYAACRITNVPRTLGEIASVTRVKKKEIGRTYRIMSR 210
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L+L+ I + ++ RFC+ L+L+ + A I N + + P ++AAAI
Sbjct: 211 YLKLN--IMPSKAEDYISRFCSKLKLSMDTRNKALEILRDAENVGLTSGKGPTGVAAAAI 268
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
Y+A + +R+TQ + ++ G+TEVT+R YKEL E
Sbjct: 269 YIASLITGERRTQRAVAEVAGVTEVTIRNRYKELTE 304
[124][TOP]
>UniRef100_B5I9V2 TFIIB zinc-binding family n=1 Tax=Aciduliprofundum boonei T469
RepID=B5I9V2_9EURY
Length = 313
Score = 92.8 bits (229), Expect = 1e-17
Identities = 47/154 (30%), Positives = 90/154 (58%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E++ A + A R+ PRTL E++ A+ + +K+IG+ + L +
Sbjct: 152 IYRKAVEKNLIRGRSIESIVAASIYAACRKVGMPRTLDEVAKASELNKKKIGRAYRHLTK 211
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L+ + + + ++ +FC+ L L+K+ A I + + + + P ++AAAI
Sbjct: 212 ELNLN--LKPTTATSYITQFCSKLHLDKNVVNKAEEIVQQATERGITSGKGPTGVAAAAI 269
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKEL 466
Y+A + ++ +TQ EI ++ G+TEVT+R YKE+
Sbjct: 270 YIAANMMNEPRTQKEIAEVAGVTEVTIRNRYKEI 303
[125][TOP]
>UniRef100_Q979P7 Transcription initiation factor IIB 2 n=1 Tax=Thermoplasma
volcanium RepID=TF2B2_THEVO
Length = 313
Score = 92.8 bits (229), Expect = 1e-17
Identities = 53/154 (34%), Positives = 88/154 (57%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E++ A + A R+ PRTL EI+ A+ V +K+IGK + L +
Sbjct: 152 IYRKAVEKNLIRGRSIESIVCASIYAACRKVNIPRTLDEIAKASEVNKKKIGKAYRHLAK 211
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L+ + + ++ +FC L L+K A ++ I ++ + + P I+AAAI
Sbjct: 212 ELDLN--LRPTTPFSYIAQFCNKLDLDKQAIVISEDIVRQAMSMGISSGKGPTGIAAAAI 269
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKEL 466
Y+A K +TQ EI +I+G+TEVT+R YKE+
Sbjct: 270 YIASVKVGKPRTQKEIARISGVTEVTIRNRYKEI 303
[126][TOP]
>UniRef100_UPI00003C83D7 transcription initiation factor IIB n=1 Tax=Ferroplasma acidarmanus
fer1 RepID=UPI00003C83D7
Length = 305
Score = 92.0 bits (227), Expect = 2e-17
Identities = 53/155 (34%), Positives = 86/155 (55%), Gaps = 1/155 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E++ A + + R PRTL EIS + V +K+IGK + L +
Sbjct: 144 IYRKAVEKNLIRGRSIESIVCASIYASCRMINIPRTLDEISKVSEVNKKKIGKAYRHLAK 203
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L+ QP S ++ +FC L L+K + HI + T + P I+AAA
Sbjct: 204 ELALNLQPTTPYS---YVSQFCNKLDLDKQVIMDSEHIIRLAGESGLSTGKGPTGIAAAA 260
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKEL 466
IY+A K++TQ ++ +++G+TEVT+R YKE+
Sbjct: 261 IYIAAMKNGKQRTQKDVARVSGVTEVTIRNRYKEI 295
[127][TOP]
>UniRef100_B6YXB2 Transcription initiation factor IIB n=1 Tax=Thermococcus onnurineus
NA1 RepID=B6YXB2_THEON
Length = 303
Score = 92.0 bits (227), Expect = 2e-17
Identities = 53/156 (33%), Positives = 88/156 (56%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
L+R +R RS+E + +A L A R PRTL EI+ + V +KEIG+ + L
Sbjct: 142 LYRKAVMKKLIRGRSIEGMVSAALYAACRMEGIPRTLDEIAAVSKVTKKEIGRSYRFLAR 201
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L+ + S ++ RF L +++ ++ A I + I + + + P ++AAA+
Sbjct: 202 GLGLN--LRPTSPIEYIDRFGDSLDVSQRTKKRAKEILQEAIKRGITSGKGPTGLAAAAL 259
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
Y+A LE ++KTQ E+ ++ +TEVT+R YKEL+E
Sbjct: 260 YVASLLEGEKKTQREVAEVAHVTEVTVRNRYKELVE 295
[128][TOP]
>UniRef100_Q5JGN1 Transcription initiation factor IIB 1 n=1 Tax=Thermococcus
kodakarensis RepID=TF2B1_PYRKO
Length = 300
Score = 92.0 bits (227), Expect = 2e-17
Identities = 51/164 (31%), Positives = 92/164 (56%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
+L+R+ +R RS+EA+ AC+ A R + PRTL EI+ + V +KEIG+ + +
Sbjct: 135 RLYREAVRKGLIRGRSIEAVIAACVYAACRLLKVPRTLDEIADVSRVDKKEIGRSFRFIA 194
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L+ + ++ +F L L++ + A I E + + ++P + AAA
Sbjct: 195 RHLNLTPKKLFVKPTDYVNKFADELGLSEKVRRRAIEILEEAYQRGLTSGKSPAGLVAAA 254
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLP 493
+Y+A +E +++TQ E+ ++ +TEVT+R YKEL+E + +P
Sbjct: 255 LYIASLMEGEKRTQREVAEVARVTEVTVRNRYKELVEKLNLKVP 298
[129][TOP]
>UniRef100_Q7QG90 AGAP009559-PA n=1 Tax=Anopheles gambiae RepID=Q7QG90_ANOGA
Length = 315
Score = 91.7 bits (226), Expect = 3e-17
Identities = 52/166 (31%), Positives = 89/166 (53%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
+F+ L +RS+EA++ ACL A R+ PRT +E+ + +KEIG+ K++ +
Sbjct: 136 IFKQALEPAALTHRSLEAVSVACLYIACRQEGVPRTFKEMCAVCSASKKEIGRCFKLITK 195
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L S ++ + M RFC+ L L Q+ ATHI + R+PIS++AAAI
Sbjct: 196 VLATS--LDHITSEDFMQRFCSKLFLPHEVQKAATHIAQKAFEADLVPDRSPISVAAAAI 253
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+A Q+ + + I G+ E+T+++ YK + + +L P +
Sbjct: 254 YMASQVSATAMSLKAVAAIAGVAELTIKQSYKLMHPHAWELFPRTH 299
[130][TOP]
>UniRef100_C6A1U8 Transcription initiation factor IIB n=1 Tax=Thermococcus sibiricus
MM 739 RepID=C6A1U8_THESM
Length = 299
Score = 91.7 bits (226), Expect = 3e-17
Identities = 53/164 (32%), Positives = 91/164 (55%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
+L+RD +R RS+E++ AC+ A R + PRTL EI+ A V +KEIG+ + +
Sbjct: 135 RLYRDAVKKGLIRGRSIESVIAACVYAACRLLKIPRTLDEIADMAKVDKKEIGRSFRFIA 194
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L+ + ++ +F L L++ + A + + V N + ++P + AAA
Sbjct: 195 RNLNLTPKKLFVKPTDYVNKFADELGLSERTRRRAIELLDQVYNMGLTSGKSPAGLVAAA 254
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLP 493
+Y+A LE +++TQ E+ + +TEVT+R YKE++E LP
Sbjct: 255 LYIAGLLEGEKRTQREVAEAARVTEVTVRNRYKEMVEKLGLKLP 298
[131][TOP]
>UniRef100_C5A638 Transcription initiation factor TFIIB (Tfb) n=1 Tax=Thermococcus
gammatolerans EJ3 RepID=C5A638_THEGJ
Length = 300
Score = 91.7 bits (226), Expect = 3e-17
Identities = 51/164 (31%), Positives = 92/164 (56%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
+L+R+ +R RS+E++ AC+ A R + PRTL EI+ + V +KEIG+ + +
Sbjct: 135 RLYREAVRKGLIRGRSIESVIAACVYAACRLLKIPRTLDEIAEVSRVDKKEIGRSFRFIA 194
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L+ + ++ +F L L++ + A + E K + ++P + AAA
Sbjct: 195 RHLNLTPKKLFVKPTDYVSKFADELGLSEKVRRRAIELLEEAYEKGLTSGKSPAGLVAAA 254
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLP 493
+Y+A +E +R+TQ E+ ++ +TEVT+R YKEL+E + +P
Sbjct: 255 LYIAGIMEGERRTQREVAEVARVTEVTVRNRYKELIEKLNLKVP 298
[132][TOP]
>UniRef100_Q18JQ1 Transcription initiation factor TFB n=1 Tax=Haloquadratum walsbyi
DSM 16790 RepID=Q18JQ1_HALWD
Length = 369
Score = 90.9 bits (224), Expect = 4e-17
Identities = 49/160 (30%), Positives = 91/160 (56%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E ++TA L A R AQ PR++ E++ + V + E + + +
Sbjct: 200 IYRRALDEDLLPGRSIEGISTAALHAAARMAQVPRSIDEVARVSRVDEDEFERAYRYI-- 257
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
+LS I + ++PRF + L++ K + A + E + + ++P+ ++AAA+
Sbjct: 258 VRELSLEIQPADPAEYVPRFASDLEVPKETERTARELLESAKRQNVHSGKSPVGLAAAAL 317
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDD 484
Y + QL + TQA++ ++T ++EVT+R Y+ELLE WD+
Sbjct: 318 YASAQLTNDELTQADVSEVTDISEVTIRNRYQELLEAWDN 357
[133][TOP]
>UniRef100_C5A415 Transcription initiation factor TFIIB (Tfb) n=1 Tax=Thermococcus
gammatolerans EJ3 RepID=C5A415_THEGJ
Length = 303
Score = 90.9 bits (224), Expect = 4e-17
Identities = 53/163 (32%), Positives = 90/163 (55%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
L+R +R RS+E + +A L A R PRTL EI+ + V +KEIG+ + +
Sbjct: 142 LYRKAVMKKLIRGRSIEGMVSAALYAACRMEGIPRTLDEIARVSKVTKKEIGRSYRFMAR 201
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L+ + S ++ RF L ++ ++ A I + I + + + P ++AAA+
Sbjct: 202 GLGLN--LRPTSPIDYVDRFGDALGVSSKTKQRAKEILQEAIKRGITSGKGPTGLAAAAL 259
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLP 493
Y+A LE ++KTQ E+ ++ +TEVT+R YKEL+E + +P
Sbjct: 260 YVASLLEGEKKTQREVAEVAHVTEVTVRNRYKELVEKLNIKVP 302
[134][TOP]
>UniRef100_C7NST0 Transcription factor TFIIB cyclin-related n=1 Tax=Halorhabdus
utahensis DSM 12940 RepID=C7NST0_HALUD
Length = 330
Score = 90.9 bits (224), Expect = 4e-17
Identities = 54/157 (34%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E +ATA L A R+A PR+L EI + + + E+ + + +
Sbjct: 167 IYRRALDENLLPGRSIEGVATASLYAAARQAGNPRSLDEIERVSRIGRMELTRTYRYVVR 226
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L QP + S ++PRF + L+LN+ A + + + + ++P+ I+AAA
Sbjct: 227 ELNLEVQPADPES---YVPRFVSDLELNEEVSRRARELVDSARKEGVLSGKSPVGIAAAA 283
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
IY A L ++R TQ EI ++ ++EVT+R YKELLE
Sbjct: 284 IYAAALLSNERVTQGEISEVADISEVTIRNRYKELLE 320
[135][TOP]
>UniRef100_C1V4B2 Transcription initiation factor IIB (TFIIB) n=1 Tax=Halogeometricum
borinquense DSM 11551 RepID=C1V4B2_9EURY
Length = 343
Score = 90.9 bits (224), Expect = 4e-17
Identities = 50/159 (31%), Positives = 90/159 (56%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E +ATA L A R AQ PR+L E++ + V ++E + + +
Sbjct: 173 IYRRALEDDLLPGRSIEGIATASLHAAARMAQVPRSLDEVAHVSRVDEEEFERAYRYI-- 230
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
+LS I + ++PRF + + + K + A + E + ++P+ ++AAA+
Sbjct: 231 VRELSLEIKPADPTEYLPRFASDIDVPKETERTARELLENAKTVGIHSGKSPVGLAAAAL 290
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
Y A QL +++ TQ+++ +T ++EVT+R Y+ELLE WD
Sbjct: 291 YAAAQLTNEKVTQSDVSDVTDISEVTIRNRYQELLEAWD 329
[136][TOP]
>UniRef100_B7R0Z5 Transcription initiation factor iib (Tfiib) n=1 Tax=Thermococcus
sp. AM4 RepID=B7R0Z5_9EURY
Length = 303
Score = 90.9 bits (224), Expect = 4e-17
Identities = 53/163 (32%), Positives = 90/163 (55%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
L+R +R RS+E + +A L A R PRTL EI+ + V +KEIG+ + +
Sbjct: 142 LYRKAVMKKLIRGRSIEGMVSAALYAACRMEGIPRTLDEIARVSKVTKKEIGRSYRFMAR 201
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L+ + S ++ RF L ++ ++ A I + I + + + P ++AAA+
Sbjct: 202 GLGLN--LRPTSPIDYVDRFGDALGVSSKTKQRAKEILQEAIKRGITSGKGPTGLAAAAL 259
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLP 493
Y+A LE ++KTQ E+ ++ +TEVT+R YKEL+E + +P
Sbjct: 260 YVASLLEGEKKTQREVAEVAHVTEVTVRNRYKELVEKLNIKVP 302
[137][TOP]
>UniRef100_B5IWJ7 TFIIB zinc-binding family n=1 Tax=Thermococcus barophilus MP
RepID=B5IWJ7_9EURY
Length = 301
Score = 90.9 bits (224), Expect = 4e-17
Identities = 50/157 (31%), Positives = 89/157 (56%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
+L+R+ +R RS+E++ AC+ A R + PRTL EI+ A V +KEI + + +
Sbjct: 138 RLYREAIRKGLIRGRSIESVIAACVYAACRLLKIPRTLDEIADIARVDKKEIARSFRFIA 197
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L+ + ++ +F L L++ + A + E N+ + ++P + AAA
Sbjct: 198 RNLNLTPKKLFVKPTDYVNKFADELGLSEKVRRRAIELLEEAYNRGLTSGKSPAGLVAAA 257
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
+Y+A LE +++TQ E+ ++ +TEVT+R YKEL+E
Sbjct: 258 LYIASLLEGEKRTQREVAEVARVTEVTVRNRYKELVE 294
[138][TOP]
>UniRef100_B9T8A1 Transcription initiation factor iib, putative n=1 Tax=Ricinus
communis RepID=B9T8A1_RICCO
Length = 312
Score = 90.5 bits (223), Expect = 6e-17
Identities = 62/162 (38%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Frame = +2
Query: 38 RNRSVEALATACLVQAIREAQEPRTLQEI-SIAANVQQKEIGK----YIKILGEALQLSQ 202
R R+ +AL ACL A R+ +PRT++EI S+A +KEIG+ +K LG L+ Q
Sbjct: 143 RGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLG--LETGQ 200
Query: 203 PINSNSISV--HMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLAC 376
+ +I M RFC+ L +N A + A V ++ F RR+PISI+AA IY+
Sbjct: 201 SVEMGTIHAGDFMRRFCSNLGMNNQAMKAAQEA--VQKSEEFDIRRSPISIAAAVIYIIS 258
Query: 377 QLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
QL D +K +I TG+ E T+R YK+L + ++PS Y
Sbjct: 259 QLSDDKKLLRDISHATGVAEGTIRNSYKDLYPHVSKIIPSWY 300
[139][TOP]
>UniRef100_C6A4U9 Transcription initiation factor IIB 2 n=1 Tax=Thermococcus
sibiricus MM 739 RepID=C6A4U9_THESM
Length = 272
Score = 90.5 bits (223), Expect = 6e-17
Identities = 58/165 (35%), Positives = 87/165 (52%), Gaps = 1/165 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
L+R +R RS+E + +ACL A R A PRTL EI + V +KEIG+ + L
Sbjct: 111 LYRKAVINRLVRGRSIEGMVSACLYAACRIANAPRTLDEIEDFSKVDKKEIGRSYRYLVR 170
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L +P N V RF L + + + A I I + + P I+AAA
Sbjct: 171 ELNLKLRPTNPVDYVV---RFGDQLGVTEKTKRRAMRIVNQAIKMGLTSGKGPTGIAAAA 227
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPS 496
IY+A LE ++ TQ E+ ++ +TEVT+R YKEL++ + +P+
Sbjct: 228 IYIASLLEGEKMTQREVAEVARVTEVTVRNRYKELVDKLNIRIPT 272
[140][TOP]
>UniRef100_P61998 Transcription initiation factor IIB n=2 Tax=Pyrococcus
RepID=TF2B_PYRFU
Length = 300
Score = 90.5 bits (223), Expect = 6e-17
Identities = 50/157 (31%), Positives = 89/157 (56%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
+L+R+ +R RS+E++ AC+ A R + PRTL EI+ A V +KEIG+ + +
Sbjct: 135 RLYREAVRKGLIRGRSIESVMAACVYAACRLLKVPRTLDEIADIARVDKKEIGRSYRFIA 194
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L+ + ++ +F L L++ + A I + + + ++P + AAA
Sbjct: 195 RNLNLTPKKLFVKPTDYVNKFADELGLSEKVRRRAIEILDEAYKRGLTSGKSPAGLVAAA 254
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
+Y+A LE +++TQ E+ ++ +TEVT+R YKEL+E
Sbjct: 255 LYIASLLEGEKRTQREVAEVARVTEVTVRNRYKELVE 291
[141][TOP]
>UniRef100_B9LP13 Zinc finger TFIIB-type domain protein n=1 Tax=Halorubrum
lacusprofundi ATCC 49239 RepID=B9LP13_HALLT
Length = 333
Score = 90.1 bits (222), Expect = 7e-17
Identities = 50/157 (31%), Positives = 92/157 (58%), Gaps = 1/157 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R S L RS+E +ATA L A R+A PR+L EIS + V + E+ + + +
Sbjct: 173 IYRRALSENLLPGRSIEGVATAALYAAARQAGNPRSLDEISAVSRVDKMELTRTYRYVIR 232
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L+L QP + S ++PRF + L L++ Q +A + + + ++P+ ++A+A
Sbjct: 233 ELKLEIQPADPGS---YVPRFVSRLGLSEETQRVARELLDSAKRAGITSGKSPVGLAASA 289
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
+Y A L +++ TQ+++ ++ ++EVT+R YKELL+
Sbjct: 290 VYAAALLSNEKVTQSQVSEVADISEVTIRNRYKELLD 326
[142][TOP]
>UniRef100_Q9UWN6 Transcription initiation factor IIB n=1 Tax=Sulfolobus
acidocaldarius RepID=TF2B_SULAC
Length = 307
Score = 90.1 bits (222), Expect = 7e-17
Identities = 52/164 (31%), Positives = 87/164 (53%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E++ A + A R + RTL EI+ +KE+ + +++
Sbjct: 145 IYRKAVEKGLVRGRSIESVVAASIYAACRRMKMARTLDEIAQFTKANRKEVARCYRLILR 204
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L + P++ ++ R TLL L+ + A I E N ++P ++AAAI
Sbjct: 205 ELDIEVPVSDPKD--YVTRIGTLLSLSGITMKHAAEIIEKAKNSGLTAGKDPAGLAAAAI 262
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPS 496
Y+A L D+R+TQ EI ++ G+TEVT+R YKEL + +PS
Sbjct: 263 YIAALLNDERRTQKEIAQVAGVTEVTVRNRYKELTQELKIQIPS 306
[143][TOP]
>UniRef100_P58109 Transcription initiation factor IIB 2 n=1 Tax=Thermococcus
kodakarensis RepID=TF2B2_PYRKO
Length = 306
Score = 90.1 bits (222), Expect = 7e-17
Identities = 52/156 (33%), Positives = 86/156 (55%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
L+R +R RS+E + +A L A R PRTL EI+ + V +KEIG+ + +
Sbjct: 145 LYRKAVMKKLIRGRSIEGMVSAALYAACRMEGIPRTLDEIASVSKVSKKEIGRSYRFMAR 204
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L+ + S ++ RF L ++ ++ A I I + + + P ++AAA+
Sbjct: 205 GLGLN--LRPTSPIEYVDRFGDALGVSARTKKRAKEILNEAIKRGITSGKGPTGLAAAAL 262
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
Y+A LE ++KTQ E+ ++ +TEVT+R YKEL+E
Sbjct: 263 YIAALLEGEKKTQREVAEVAHVTEVTVRNRYKELVE 298
[144][TOP]
>UniRef100_Q8TX21 Transcription initiation factor IIB n=1 Tax=Methanopyrus kandleri
RepID=TF2B_METKA
Length = 307
Score = 89.4 bits (220), Expect = 1e-16
Identities = 54/157 (34%), Positives = 87/157 (55%), Gaps = 1/157 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQ-QKEIGKYIKILG 181
++R +R R +E++ A + A +EA+ PRT +EI+ A V + EI + ++L
Sbjct: 145 IYRKAYKEGIVRGRGIESVLGAAVFAACKEARVPRTAREIAEALGVSDENEILRAYRVLQ 204
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L Q S H+PRF + L ++++ Q A I E K + P ++AAA
Sbjct: 205 RRLNLKQ--KPTEPSDHLPRFASKLGVSENVQAKAQEIIEKAKEKGITVGKGPAGVAAAA 262
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
+Y+A LE +R+TQ EI ++ +TEVT+R YKE+ E
Sbjct: 263 LYIASILEGERRTQKEIAEVARVTEVTIRNRYKEICE 299
[145][TOP]
>UniRef100_A8AC96 Transcription initiation factor IIB n=1 Tax=Ignicoccus hospitalis
KIN4/I RepID=TF2B_IGNH4
Length = 316
Score = 89.4 bits (220), Expect = 1e-16
Identities = 51/156 (32%), Positives = 84/156 (53%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E++ A + A R +PRTL EI+ V +KE+ + +++ +
Sbjct: 146 IYRKAVEKGLVRGRSIESVVAAVIYAACRIHHQPRTLDEIAKKLEVNRKEVARCYRLITK 205
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L+L PI H+PR L+L E A I E + ++P I+AA I
Sbjct: 206 ELKLKVPIAD--AMDHIPRIGEALKLRGDIIEYAMKIMEKIKGHPITAGKDPAGIAAAVI 263
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
Y+A + +R+TQ EI + G+TEVT+R YKE+++
Sbjct: 264 YIAVMQKGERRTQKEIANVAGVTEVTVRNRYKEIMK 299
[146][TOP]
>UniRef100_B9II90 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9II90_POPTR
Length = 312
Score = 89.0 bits (219), Expect = 2e-16
Identities = 61/162 (37%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Frame = +2
Query: 38 RNRSVEALATACLVQAIREAQEPRTLQEI-SIAANVQQKEIGK----YIKILGEALQLSQ 202
R R+ +AL ACL A R+ +PRT++EI S+A +KEIG+ +K LG L+ Q
Sbjct: 143 RGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLG--LETGQ 200
Query: 203 PINSNSISV--HMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLAC 376
+ +I M RFC+ L ++ + AT V ++ F RR+PISI+AA IY+
Sbjct: 201 SVEMGTIHAGDFMRRFCSNLGMSNHTVKAATEA--VKTSEQFDIRRSPISIAAAVIYIIT 258
Query: 377 QLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
QL D +K +I TG+ E T+R YK+L + ++PS Y
Sbjct: 259 QLSDDKKPLRDISLATGVAEGTIRNSYKDLYPHVSKIIPSWY 300
[147][TOP]
>UniRef100_Q975S1 Transcription initiation factor IIB n=1 Tax=Sulfolobus tokodaii
RepID=TF2B_SULTO
Length = 308
Score = 88.6 bits (218), Expect = 2e-16
Identities = 51/164 (31%), Positives = 89/164 (54%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E++ A + A R + RTL EI+ +KE+ + +++
Sbjct: 146 IYRKAVEKGLVRGRSIESVVAASIYAACRRMKMARTLDEIAQFTKANRKEVARCYRLILR 205
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L ++ P++ ++ R +LL L+ S ++A I E ++P ++AAAI
Sbjct: 206 ELDINVPVSDPKD--YVTRIGSLLGLSGSTMKMAIDIIEKAKESGLTAGKDPAGLAAAAI 263
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPS 496
Y+A L D+R+TQ EI +I G+TEVT+R YKEL + +P+
Sbjct: 264 YIAALLNDERRTQKEIAQIAGVTEVTVRNRYKELTQELKIQIPN 307
[148][TOP]
>UniRef100_Q8W0W3 Transcription initiation factor IIB n=3 Tax=Oryza sativa
RepID=TF2B_ORYSJ
Length = 312
Score = 88.6 bits (218), Expect = 2e-16
Identities = 58/165 (35%), Positives = 91/165 (55%), Gaps = 9/165 (5%)
Frame = +2
Query: 35 LRNRSVEALATACLVQAIREAQEPRTLQEI-SIAANVQQKEIGKYIKILGEALQLSQPIN 211
+R R+ +A+ ACL A R+ PRT++EI S+A +KEIG+ + + + L++ +
Sbjct: 142 IRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATKKEIGRAKEFIVKQLEVEMGQS 201
Query: 212 SNSISVH----MPRFCTLLQLN----KSAQELATHIGEVVINKCFCTRRNPISISAAAIY 367
++H + RFC+ L +N K+AQE E+ I RR+PISI+AA IY
Sbjct: 202 MEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEELDI------RRSPISIAAAVIY 255
Query: 368 LACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
+ QL D +K +I TG+ E T+R YK+L L+P+ Y
Sbjct: 256 MITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIPNTY 300
[149][TOP]
>UniRef100_P48512 Transcription initiation factor IIB-1 n=2 Tax=Arabidopsis thaliana
RepID=TF2B1_ARATH
Length = 312
Score = 88.6 bits (218), Expect = 2e-16
Identities = 61/162 (37%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Frame = +2
Query: 38 RNRSVEALATACLVQAIREAQEPRTLQEISIAAN-VQQKEIGK----YIKILGEALQLSQ 202
R R+ +AL ACL A R+ +PRT++EI + AN +KEIG+ +K LG L+ Q
Sbjct: 143 RGRNQDALYAACLYIACRQEDKPRTIKEICVIANGATKKEIGRAKDYIVKTLG--LEPGQ 200
Query: 203 PINSNSISV--HMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLAC 376
++ +I M RFC+ L ++ A + A V ++ F RR+PISI+A IY+
Sbjct: 201 SVDLGTIHAGDFMRRFCSNLAMSNHAVKAAQEA--VQKSEEFDIRRSPISIAAVVIYIIT 258
Query: 377 QLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
QL D +KT +I TG+ E T+R YK+L + + PS Y
Sbjct: 259 QLSDDKKTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWY 300
[150][TOP]
>UniRef100_A4YIU5 Transcription initiation factor IIB (TFIIB) n=1 Tax=Metallosphaera
sedula DSM 5348 RepID=A4YIU5_METS5
Length = 305
Score = 88.2 bits (217), Expect = 3e-16
Identities = 49/156 (31%), Positives = 88/156 (56%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E++ A + + R + RTL EI+ +KE+ + ++L
Sbjct: 143 IYRKAVEKGLVRGRSIESVVAAAIYASCRRMKIARTLDEIAQYTKANRKEVARCYRLLLR 202
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L + P++ ++ R +LL L+ ++ +LA I E N ++P ++AAAI
Sbjct: 203 ELNVDVPVSDPKD--YVTRIGSLLGLSGASMKLAAEILEKAKNVGLTAGKDPAGLAAAAI 260
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
Y+A L ++R+TQ EI ++ G+TEVT+R YKEL++
Sbjct: 261 YIAALLNEERRTQKEIAQVAGVTEVTVRNRYKELIQ 296
[151][TOP]
>UniRef100_B9H9K1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9H9K1_POPTR
Length = 312
Score = 87.8 bits (216), Expect = 4e-16
Identities = 60/162 (37%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Frame = +2
Query: 38 RNRSVEALATACLVQAIREAQEPRTLQEI-SIAANVQQKEIGK----YIKILGEALQLSQ 202
R R+ +AL ACL A R+ +PRT++EI S+A +KEIG+ +K LG L+ Q
Sbjct: 143 RGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLG--LEAGQ 200
Query: 203 PINSNSISV--HMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLAC 376
+ +I M RFC+ L ++ + AT V ++ F RR+PISI+AA IY+
Sbjct: 201 SVEMGTIHAGDFMRRFCSNLGMSNHTVKAATEA--VKTSEQFDIRRSPISIAAAVIYIIT 258
Query: 377 QLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
QL D +K +I TG+ E T+R YK+L + ++P+ Y
Sbjct: 259 QLSDDKKPLRDISLATGVAEGTIRNSYKDLYPHVSKIIPAWY 300
[152][TOP]
>UniRef100_B4FHS1 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FHS1_MAIZE
Length = 312
Score = 87.8 bits (216), Expect = 4e-16
Identities = 56/165 (33%), Positives = 92/165 (55%), Gaps = 9/165 (5%)
Frame = +2
Query: 35 LRNRSVEALATACLVQAIREAQEPRTLQEI-SIAANVQQKEIGKYIKILGEALQLSQPIN 211
+R R+ +A+ ACL A R+ PRT++EI S+A +KEIG+ + + + L++ +
Sbjct: 142 IRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATKKEIGRAKEFIVKQLEVEMGQS 201
Query: 212 SNSISVH----MPRFCTLLQLN----KSAQELATHIGEVVINKCFCTRRNPISISAAAIY 367
++H + RFC+ L +N ++AQ+ H E+ I RR+PISI+AA IY
Sbjct: 202 MEMGTIHAGNFLRRFCSTLGMNNQAVRAAQDAVKHSEELDI------RRSPISIAAAVIY 255
Query: 368 LACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
+ QL + +K +I TG+ E T+R YK+L L+P+ Y
Sbjct: 256 MITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIPNTY 300
[153][TOP]
>UniRef100_C3MQW9 Transcription factor TFIIB cyclin-related n=5 Tax=Sulfolobus
islandicus RepID=C3MQW9_SULIL
Length = 309
Score = 87.4 bits (215), Expect = 5e-16
Identities = 50/164 (30%), Positives = 87/164 (53%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E++ A + A R + RTL EI+ +KE+ + ++L
Sbjct: 147 IYRKAVEKGLVRGRSIESVVAAAIYAACRRMKLARTLDEIAQYTKANRKEVARCYRLLLR 206
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L +S P++ ++ R LL L+ + + A I + ++P ++AAAI
Sbjct: 207 ELDVSVPVSDPKD--YVTRIANLLGLSGAVMKTAAEIIDKAKGSGLTAGKDPAGLAAAAI 264
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPS 496
Y+A L D+R+TQ EI ++ G+TEVT+R YKEL + +P+
Sbjct: 265 YIASLLHDERRTQKEIAQVAGVTEVTVRNRYKELTQELKISIPT 308
[154][TOP]
>UniRef100_C7NNY1 Transcription factor TFIIB cyclin-related n=1 Tax=Halorhabdus
utahensis DSM 12940 RepID=C7NNY1_HALUD
Length = 323
Score = 87.4 bits (215), Expect = 5e-16
Identities = 52/162 (32%), Positives = 92/162 (56%), Gaps = 1/162 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E +ATA L A R+A PR+L EI + V++ E+ + + +
Sbjct: 162 IYRRALDENLLPGRSIEGVATASLYAAARQAGNPRSLDEIDNVSRVEKDEVARTYRYVVR 221
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L+L +P + S ++PRF + L+L + A+ A + E + + ++P+ ++AAA
Sbjct: 222 ELKLEVKPADPTS---YVPRFASDLELTEEAERHARDLLENAKQEGVHSGKSPVGLAAAA 278
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDL 487
IY A L +++ TQ E+ ++ ++EVT+R Y ELLE D+
Sbjct: 279 IYAASLLANEKVTQNEVSEVANISEVTIRNRYHELLEAKQDI 320
[155][TOP]
>UniRef100_P58111 Transcription initiation factor IIB 1 n=2 Tax=Sulfolobus
solfataricus RepID=TF2B1_SULSO
Length = 309
Score = 87.4 bits (215), Expect = 5e-16
Identities = 50/164 (30%), Positives = 87/164 (53%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E++ A + A R + RTL EI+ +KE+ + ++L
Sbjct: 147 IYRKAVEKGLVRGRSIESVVAAAIYAACRRMKLARTLDEIAQYTKANRKEVARCYRLLLR 206
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L +S P++ ++ R LL L+ + + A I + ++P ++AAAI
Sbjct: 207 ELDVSVPVSDPKD--YVTRIANLLGLSGAVMKTAAEIIDKAKGSGLTAGKDPAGLAAAAI 264
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPS 496
Y+A L D+R+TQ EI ++ G+TEVT+R YKEL + +P+
Sbjct: 265 YIASLLHDERRTQKEIAQVAGVTEVTVRNRYKELTQELKISIPT 308
[156][TOP]
>UniRef100_A7PWI7 Chromosome chr8 scaffold_34, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PWI7_VITVI
Length = 312
Score = 87.0 bits (214), Expect = 6e-16
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Frame = +2
Query: 38 RNRSVEALATACLVQAIREAQEPRTLQEI-SIAANVQQKEIGKYIKILGEALQLSQPINS 214
R R+ +AL ACL A R+ +PRT++EI S+A +KEIG+ + + + L+ + +
Sbjct: 143 RGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLEAEKGQSV 202
Query: 215 NSISVH----MPRFCTLL----QLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYL 370
++H M RFC+ L Q+ K+AQE E F RR+P+SI+AA IY+
Sbjct: 203 EMGTIHAGDFMRRFCSNLGMTNQVVKAAQEAVQKSEE------FDIRRSPVSIAAAVIYI 256
Query: 371 ACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
QL D++K +I TG+ E T+R YK+L + ++PS Y
Sbjct: 257 ITQLSDEKKLLRDISIATGVAEGTIRNSYKDLYPHISKIIPSWY 300
[157][TOP]
>UniRef100_C4V7B4 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01
RepID=C4V7B4_NOSCE
Length = 333
Score = 87.0 bits (214), Expect = 6e-16
Identities = 53/156 (33%), Positives = 89/156 (57%), Gaps = 1/156 (0%)
Frame = +2
Query: 35 LRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGEALQLSQPINS 214
L+ +++E + AC+ A R PRT +E+S+ +VQ+KEIGK K++ ++ +++
Sbjct: 168 LKGKNIEGVVGACIYIACRLENCPRTFKEVSLITSVQKKEIGKSFKLISPHVENLTVVST 227
Query: 215 NSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQL-EDK 391
I + RFC+ L+LN Q LA I V ++P SI+AA IY+ L +
Sbjct: 228 KDI---VARFCSDLRLNIKIQRLAFAISAKVQEAGILAGKSPDSIAAAIIYMVTYLVPEG 284
Query: 392 RKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSN 499
RK Q +I +T +TEVT++ YKEL + ++P++
Sbjct: 285 RKVQKDIQYVTNVTEVTIKNTYKELAIFKNVIIPTD 320
[158][TOP]
>UniRef100_Q3L5A4 Hypothetical transcription initiation factor IIB-like protein
variant #1 (Fragment) n=1 Tax=Sulfolobus islandicus
RepID=Q3L5A4_SULIS
Length = 187
Score = 87.0 bits (214), Expect = 6e-16
Identities = 50/163 (30%), Positives = 86/163 (52%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E++ A + A R + RTL EI+ +KE+ + ++L
Sbjct: 27 IYRKAVEKGLVRGRSIESVVAAAIYAACRRMKLARTLDEIAQYTKANRKEVARCYRLLLR 86
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L +S P++ ++ R LL L+ + + A I + ++P ++AAAI
Sbjct: 87 ELDVSVPVSDPKD--YVTRIANLLGLSGAVMKTAAEIIDKAKGSGLTAGKDPAGLAAAAI 144
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLP 493
Y+A L D+R+TQ EI ++ G+TEVT+R YKEL + +P
Sbjct: 145 YIASLLHDERRTQKEIAQVAGVTEVTVRNRYKELTQELKISIP 187
[159][TOP]
>UniRef100_P48513 Transcription initiation factor IIB n=1 Tax=Glycine max
RepID=TF2B_SOYBN
Length = 313
Score = 87.0 bits (214), Expect = 6e-16
Identities = 60/163 (36%), Positives = 93/163 (57%), Gaps = 8/163 (4%)
Frame = +2
Query: 38 RNRSVEALATACLVQAIREAQEPRTLQEI-SIAANVQQKEIGKYIKILGEALQLSQPINS 214
R R+ +AL ACL A R+ +PRT++EI S+A +KEIG+ + + + L L N
Sbjct: 144 RGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLE---NG 200
Query: 215 NSI---SVH----MPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLA 373
N++ ++H M RFC+ L +N A + A V ++ F RR+PISI+AA IY+
Sbjct: 201 NAVEMGTIHAGDFMRRFCSNLCMNNQAVKAAQEA--VQKSEEFDIRRSPISIAAAVIYII 258
Query: 374 CQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
QL D +K +I TG+ E T+R YK+L + ++P+ Y
Sbjct: 259 TQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPNWY 301
[160][TOP]
>UniRef100_A7QJY1 Chromosome undetermined scaffold_109, whole genome shotgun sequence
n=1 Tax=Vitis vinifera RepID=A7QJY1_VITVI
Length = 312
Score = 86.7 bits (213), Expect = 8e-16
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Frame = +2
Query: 38 RNRSVEALATACLVQAIREAQEPRTLQEI-SIAANVQQKEIGKYIKILGEALQLSQPINS 214
R R+ +AL ACL A R+ +PRT++EI S+A +KEIG+ + + + L+ + +
Sbjct: 143 RGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLEAEKGQSV 202
Query: 215 NSISVH----MPRFCTLL----QLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYL 370
++H M RFC+ L Q+ K+AQE E F RR+P+SI+AA IY+
Sbjct: 203 EMGTIHAGDFMRRFCSNLGMTNQVVKAAQEAVQKSEE------FDIRRSPVSIAAAVIYI 256
Query: 371 ACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
QL D++K +I TG+ E T+R YK+L + ++PS Y
Sbjct: 257 ITQLSDEKKLLRDISIATGVAEGTIRNSYKDLYPHISRIIPSWY 300
[161][TOP]
>UniRef100_A5BBG2 Putative uncharacterized protein (Fragment) n=1 Tax=Vitis vinifera
RepID=A5BBG2_VITVI
Length = 312
Score = 86.7 bits (213), Expect = 8e-16
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Frame = +2
Query: 38 RNRSVEALATACLVQAIREAQEPRTLQEI-SIAANVQQKEIGKYIKILGEALQLSQPINS 214
R R+ +AL ACL A R+ +PRT++EI S+A +KEIG+ + + + L+ + +
Sbjct: 143 RGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLEAEKGQSV 202
Query: 215 NSISVH----MPRFCTLL----QLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYL 370
++H M RFC+ L Q+ K+AQE E F RR+P+SI+AA IY+
Sbjct: 203 EMGTIHAGDFMRRFCSNLGMTNQVVKAAQEAVQKSEE------FDIRRSPVSIAAAVIYI 256
Query: 371 ACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
QL D++K +I TG+ E T+R YK+L + ++PS Y
Sbjct: 257 ITQLSDEKKLLRDISIATGVAEGTIRNSYKDLYPHISRIIPSWY 300
[162][TOP]
>UniRef100_B7XLT0 Transcription initiation factor IIB n=1 Tax=Enterocytozoon bieneusi
H348 RepID=B7XLT0_ENTBH
Length = 213
Score = 86.7 bits (213), Expect = 8e-16
Identities = 54/168 (32%), Positives = 92/168 (54%), Gaps = 1/168 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
+F+D S L+ +++E AC+ A + PRT +EIS+ V ++EIGK K++ +
Sbjct: 39 IFKDVESKKLLKGKNLEGCIGACIYIACKTEGCPRTFKEISVITVVPKREIGKCYKLISK 98
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
+ ++ + + I + RFC+ L LN Q A +I + V + R+P SI++A I
Sbjct: 99 EIDTTRIMATADI---VGRFCSDLNLNAKIQNTARYIAKKVQDIGCLAGRSPDSIASAII 155
Query: 365 YLA-CQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNYT 505
YL C D Q +I +T +T+VT+R YK+LL +++P +T
Sbjct: 156 YLTLCLYPDFLFLQKDIQYVTNVTDVTIRNTYKDLLPYKKEIIPEEFT 203
[163][TOP]
>UniRef100_O58594 208aa long hypothetical transcription initiation factor IIB n=1
Tax=Pyrococcus horikoshii RepID=O58594_PYRHO
Length = 208
Score = 86.7 bits (213), Expect = 8e-16
Identities = 46/157 (29%), Positives = 90/157 (57%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
+++R + + RS+E++A AC+ + R + PRTL EI+ A +K I + +++
Sbjct: 46 RIYRKLIKSGVTKGRSIESVAAACIYISCRLYKVPRTLDEIAKVAKEDKKVIARVYRLVV 105
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
+ L LS ++ +F L++++ + A + +K + +NP+ ++A+
Sbjct: 106 KKLGLSSKDMLIRPEYYIDKFADELEVSERVKRRALRLLNEAKDKGITSGKNPLGLAASI 165
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
+Y+A LE +R+TQ EI ++ G+TEVT+R YKEL++
Sbjct: 166 LYIASLLEGERRTQKEIARVAGITEVTIRNRYKELVK 202
[164][TOP]
>UniRef100_C7NY62 Transcription factor TFIIB cyclin-related n=1 Tax=Halomicrobium
mukohataei DSM 12286 RepID=C7NY62_HALMD
Length = 324
Score = 86.7 bits (213), Expect = 8e-16
Identities = 49/157 (31%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E +AT+ L A R+A PR+L E++ + V++ E+ + + +
Sbjct: 165 IYRRALDEDLLPGRSIEGVATSALYAAARQANNPRSLDEMTHVSRVERMELTRTYRYIIR 224
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L P S ++PRFC+ L L+ + A + E + + ++P+ I+AAA
Sbjct: 225 ELGLEVAPAKPES---YVPRFCSELSLSDETERRARELIEAARDGGILSGKSPVGIAAAA 281
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
+Y A L +++ TQ+E+ + ++EVT+R YKELL+
Sbjct: 282 VYAAALLTNEKVTQSEVSGVADISEVTIRNRYKELLD 318
[165][TOP]
>UniRef100_B9ZB69 Transcription factor TFIIB cyclin-related n=1 Tax=Natrialba magadii
ATCC 43099 RepID=B9ZB69_NATMA
Length = 326
Score = 86.7 bits (213), Expect = 8e-16
Identities = 51/157 (32%), Positives = 89/157 (56%), Gaps = 1/157 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E ++TAC+ A R+A PR+L EI+ + V++ EI + + +
Sbjct: 165 IYRRALDEDLLPGRSIEGVSTACVYAAARQAGVPRSLDEIADVSRVEKNEIARTYRYVVR 224
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L QP + S ++PRF + L L+ A+ A + + K + ++P+ ++AAA
Sbjct: 225 ELGLEVQPADPES---YVPRFASGLDLSDEAEHRARALLQNAKEKGVHSGKSPVGLAAAA 281
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
+Y A L +++ TQA + + ++EVT+R Y ELLE
Sbjct: 282 VYAAALLTNEKTTQAAVSDVADISEVTIRNRYHELLE 318
[166][TOP]
>UniRef100_P50387 Transcription initiation factor IIB n=1 Tax=Sulfolobus shibatae
RepID=TF2B_SULSH
Length = 309
Score = 86.7 bits (213), Expect = 8e-16
Identities = 50/164 (30%), Positives = 86/164 (52%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E++ A + A R + RTL EI+ +KE+ + ++L
Sbjct: 147 IYRKAVEKGLVRGRSIESVVAAAIYAACRRMKLARTLDEIAQYTKANRKEVARCYRLLLR 206
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L +S P++ ++ R LL L+ + A I + ++P ++AAAI
Sbjct: 207 ELDVSVPVSDPKD--YVTRIANLLGLSGRVMKTAAEIIDKAKGSGLTAGKDPAGLAAAAI 264
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPS 496
Y+A L D+R+TQ EI ++ G+TEVT+R YKEL + +P+
Sbjct: 265 YIASLLHDERRTQKEIAQVAGVTEVTVRNRYKELTQELKISIPT 308
[167][TOP]
>UniRef100_UPI0000EBC715 PREDICTED: similar to Transcription initiation factor IIB (General
transcription factor TFIIB) (S300-II) n=1 Tax=Bos taurus
RepID=UPI0000EBC715
Length = 149
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/134 (35%), Positives = 78/134 (58%)
Frame = +2
Query: 101 EPRTLQEISIAANVQQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQE 280
+P + EI + + +KEIG+ K++ +AL+ S ++ + M RFC+ L L K Q
Sbjct: 6 DPSLIPEICAVSRISKKEIGRCFKLILKALETS--VDLITTGDFMSRFCSNLCLPKQVQM 63
Query: 281 LATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKITGLTEVTLRKVYK 460
ATHI + R+PIS++AAAIY+A Q +++TQ EI I G+ +VT+R+ Y+
Sbjct: 64 AATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYR 123
Query: 461 ELLENWDDLLPSNY 502
+ DL P+++
Sbjct: 124 LIYPRAPDLFPTDF 137
[168][TOP]
>UniRef100_UPI00005A11DE PREDICTED: similar to general transcription factor IIB isoform 2
n=1 Tax=Canis lupus familiaris RepID=UPI00005A11DE
Length = 273
Score = 86.3 bits (212), Expect = 1e-15
Identities = 49/133 (36%), Positives = 77/133 (57%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LF+ L+ R+ +A+A+ACL A R+ PRT +EI + + +KEIG+ K++ +
Sbjct: 141 LFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILK 200
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
AL+ S ++ + M RFC+ L L K Q ATHI + R+PIS++AAAI
Sbjct: 201 ALETS--VDLITTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAI 258
Query: 365 YLACQLEDKRKTQ 403
Y+A Q +++TQ
Sbjct: 259 YMASQASAEKRTQ 271
[169][TOP]
>UniRef100_C5X694 Putative uncharacterized protein Sb02g031020 n=1 Tax=Sorghum
bicolor RepID=C5X694_SORBI
Length = 312
Score = 86.3 bits (212), Expect = 1e-15
Identities = 57/165 (34%), Positives = 91/165 (55%), Gaps = 9/165 (5%)
Frame = +2
Query: 35 LRNRSVEALATACLVQAIREAQEPRTLQEI-SIAANVQQKEIGKYIKILGEALQLSQPIN 211
+R R+ +A+ ACL A R+ PRT++EI S+A +KEIG+ + + + L++ +
Sbjct: 142 IRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATKKEIGRAKEFIVKQLEVEMGQS 201
Query: 212 SNSISVH----MPRFCTLLQLN----KSAQELATHIGEVVINKCFCTRRNPISISAAAIY 367
++H + RFC+ L +N K+AQE E+ I RR+PISI+AA IY
Sbjct: 202 MEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEELDI------RRSPISIAAAVIY 255
Query: 368 LACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
+ QL + +K +I TG+ E T+R YK+L L+P+ Y
Sbjct: 256 MITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPYAARLIPNTY 300
[170][TOP]
>UniRef100_B8LMH3 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LMH3_PICSI
Length = 313
Score = 86.3 bits (212), Expect = 1e-15
Identities = 55/169 (32%), Positives = 95/169 (56%), Gaps = 5/169 (2%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEI-SIAANVQQKEIGK----Y 166
++++ + +R R+ +A+ ACL A R+ +PRT++EI S+A +KE+G+
Sbjct: 132 EIYKKVEDSKSIRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGASKKEVGRAKEFI 191
Query: 167 IKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPIS 346
+K L E + S + + + RFC+ L + A + AT V ++ RR+PIS
Sbjct: 192 VKQLEEEMGKSMEMGTIHAGDFLRRFCSHLGMGHQAVKAATEA--VKKSEELDIRRSPIS 249
Query: 347 ISAAAIYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLP 493
I+AAAIY+ QL +++K +I + TG+ E T+R YK+L + L+P
Sbjct: 250 IAAAAIYMISQLSEEKKLLRDISRATGVAEGTIRNSYKDLYPHAARLIP 298
[171][TOP]
>UniRef100_Q5V2G4 Transcription initiation factor IIB n=1 Tax=Haloarcula marismortui
RepID=Q5V2G4_HALMA
Length = 324
Score = 86.3 bits (212), Expect = 1e-15
Identities = 50/164 (30%), Positives = 94/164 (57%), Gaps = 1/164 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E ++TA L A R+A PR+L EI+ + V++ EI + + +
Sbjct: 164 IYRRALDEDLLPGRSIEGVSTASLYAAARQAGTPRSLDEIAGVSRVEKDEIARTYRYVVR 223
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L QP + S ++PRF + L L++ + A + + + + ++P+ ++AAA
Sbjct: 224 ELSLEIQPADPES---YVPRFASDLDLSEEVERRARQLLQNAKQEGVHSGKSPVGLAAAA 280
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLP 493
+Y A L +++ TQ+++ ++ ++EVT+R Y ELLE D++ P
Sbjct: 281 VYAASLLTNEKVTQSQVSEVANISEVTIRNRYHELLEAEDNIHP 324
[172][TOP]
>UniRef100_C3NGJ8 Transcription factor TFIIB cyclin-related n=1 Tax=Sulfolobus
islandicus Y.N.15.51 RepID=C3NGJ8_SULIN
Length = 309
Score = 86.3 bits (212), Expect = 1e-15
Identities = 49/164 (29%), Positives = 87/164 (53%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E++ A + A R + RTL EI+ +KE+ + ++L
Sbjct: 147 IYRKAVEKGLVRGRSIESVVAAAIYAACRRMKLARTLDEIAQYTKANRKEVARCYRLLLR 206
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L +S P++ ++ R LL L+ + + A I + ++P ++AAAI
Sbjct: 207 ELDVSVPVSDPKD--YVTRIANLLGLSGAVMKTAAEIIDKAKGSGLTAGKDPAGLAAAAI 264
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPS 496
Y+A L D+R+TQ EI ++ G+TEVT+R YKE+ + +P+
Sbjct: 265 YIASLLHDERRTQKEIAQVAGVTEVTVRNRYKEVTQELKISIPT 308
[173][TOP]
>UniRef100_Q9HSB3 Transcription initiation factor IIB 6 n=2 Tax=Halobacterium
salinarum RepID=TF2B6_HALSA
Length = 319
Score = 86.3 bits (212), Expect = 1e-15
Identities = 51/162 (31%), Positives = 92/162 (56%), Gaps = 1/162 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E +AT+C+ A R+A PR+L EI+ + V++ EI + + +
Sbjct: 159 IYRRALEDDLLPGRSIEGVATSCVYAAARQAGVPRSLDEIADVSRVEKAEIARTYRYVVR 218
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L P + S ++PRF + L L+ A A + + +K + ++P+ ++AAA
Sbjct: 219 ELGLEVAPADPES---YVPRFASDLGLSDEASHRARELLKTAKDKGVHSGKSPVGLAAAA 275
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDL 487
+Y A L +++ TQA++ ++ ++EVT+R Y ELLE D +
Sbjct: 276 VYAAALLTNEKTTQAKVSEVADISEVTIRNRYHELLEAEDTI 317
[174][TOP]
>UniRef100_A7PQV4 Chromosome chr6 scaffold_25, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PQV4_VITVI
Length = 314
Score = 85.9 bits (211), Expect = 1e-15
Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 9/165 (5%)
Frame = +2
Query: 35 LRNRSVEALATACLVQAIREAQEPRTLQEI-SIAANVQQKEIGKYIKILGEALQLSQPIN 211
LR R+ +A+ AC+ A R+ +PRT++EI S+A +KEIG+ + + + L++ +
Sbjct: 144 LRGRNQDAILAACIYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLEVEMGQS 203
Query: 212 SNSISVH----MPRFCTLL----QLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIY 367
++H + RFC+ L Q K+AQE E+ I RR+PIS++AA IY
Sbjct: 204 MEMGTIHAGDFLRRFCSHLGMTNQAVKAAQEAVQKSEELDI------RRSPISVAAAVIY 257
Query: 368 LACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
+ QL D +K +I TG+ E T+R YK+L ++PS+Y
Sbjct: 258 MITQLSDDKKLLKDISLATGVAEGTIRNSYKDLYPYASRIIPSSY 302
[175][TOP]
>UniRef100_Q3IRM9 Transcription initiation factor TFB 3 n=1 Tax=Natronomonas
pharaonis DSM 2160 RepID=Q3IRM9_NATPD
Length = 319
Score = 85.9 bits (211), Expect = 1e-15
Identities = 50/162 (30%), Positives = 93/162 (57%), Gaps = 1/162 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E ++TA + A R+A PR+L E++ + V++ EI + + +
Sbjct: 158 IYRRALDENLLPGRSIEGVSTASVYAAARQAGVPRSLDEVAGVSRVEKSEIARTYRYVVR 217
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L QP + S ++PRF + L+L++ A+ A + + + + ++P+ ++AAA
Sbjct: 218 ELGLEVQPADPES---YVPRFASELELSEEAENRARQLLQNAKEQGVHSGKSPVGLAAAA 274
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDL 487
+Y A L +++ TQA + ++ ++EVT+R Y ELLE DL
Sbjct: 275 VYAASLLTNEKTTQAAVSEVADISEVTIRNRYHELLEAEQDL 316
[176][TOP]
>UniRef100_Q3L5A6 Hypothetical transcription initiation factor IIB-like protein
variant #2 (Fragment) n=1 Tax=Sulfolobus islandicus
RepID=Q3L5A6_SULIS
Length = 187
Score = 85.9 bits (211), Expect = 1e-15
Identities = 50/163 (30%), Positives = 85/163 (52%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E++ A + A R + RTL EI+ +KE+ ++L
Sbjct: 27 IYRKAVEKGLVRGRSIESVVAAAIYAACRRMKLARTLDEIAQYTKANRKEVAXCYRLLLR 86
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L +S P++ ++ R LL L+ + + A I + ++P ++AAAI
Sbjct: 87 ELDVSVPVSDPKD--YVTRIANLLGLSGAVMKTAAEIIDKAKGSGLTAGKDPAGLAAAAI 144
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLP 493
Y+A L D+R+TQ EI ++ G+TEVT+R YKEL + +P
Sbjct: 145 YIASLLHDERRTQKEIAQVAGVTEVTVRNRYKELTQELKISIP 187
[177][TOP]
>UniRef100_B7XLJ0 Transcription initiation factor IIB n=1 Tax=Enterocytozoon bieneusi
H348 RepID=B7XLJ0_ENTBH
Length = 311
Score = 85.5 bits (210), Expect = 2e-15
Identities = 54/168 (32%), Positives = 91/168 (54%), Gaps = 1/168 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
+F+D S L+ +++E AC+ A + PRT +EIS+ V ++EIGK K++ +
Sbjct: 137 IFKDVESKKLLKGKNLEGCIGACIYIACKTEGCPRTFKEISVITVVPKREIGKCYKLISK 196
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
+ + + + I + RFC+ L LN Q A +I + V + R+P SI++A I
Sbjct: 197 EIDTTGIMATADI---VGRFCSDLNLNAKIQNTARYIAKKVQDIGCLAGRSPDSIASAII 253
Query: 365 YLA-CQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNYT 505
YL C D Q +I +T +T+VT+R YK+LL +++P +T
Sbjct: 254 YLTLCLYPDFLFLQKDIQYVTNVTDVTIRNTYKDLLPYKKEIIPEEFT 301
[178][TOP]
>UniRef100_Q5V147 Transcription initiation factor IIB n=1 Tax=Haloarcula marismortui
RepID=Q5V147_HALMA
Length = 321
Score = 85.5 bits (210), Expect = 2e-15
Identities = 50/162 (30%), Positives = 92/162 (56%), Gaps = 1/162 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E ++TA + A R+A PR+L EI+ + V++ EI + + +
Sbjct: 160 IYRRALDEDLLPGRSIEGVSTASVYAAARQAGVPRSLDEITEVSRVEKSEIARTYRYVVR 219
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L +P + S ++PRF + L+L+ A+ A + + + + ++P+ ++AAA
Sbjct: 220 ELSLEVRPADPES---YVPRFASSLELSDEAEHRARQLLQNAKEQGVHSGKSPVGLAAAA 276
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDL 487
+Y A L +++ TQA + ++ ++EVT+R Y ELLE DL
Sbjct: 277 VYAAALLTNEKTTQAAVSEVADISEVTIRNRYHELLEAEQDL 318
[179][TOP]
>UniRef100_Q9SS44 Transcription initiation factor IIB-2 n=2 Tax=Arabidopsis thaliana
RepID=TF2B2_ARATH
Length = 312
Score = 85.5 bits (210), Expect = 2e-15
Identities = 63/166 (37%), Positives = 91/166 (54%), Gaps = 11/166 (6%)
Frame = +2
Query: 38 RNRSVEALATACLVQAIREAQEPRTLQEI-SIAANVQQKEIGK----YIKILGEALQLSQ 202
R R+ +AL ACL A R+ +PRT++EI S+A +KEIG+ +K LG L+ Q
Sbjct: 143 RGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLG--LETGQ 200
Query: 203 PINSNSISV--HMPRFCTLL----QLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
+ +I M RFC+ L Q K+AQE E F RR+PISI+AA I
Sbjct: 201 LVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEE------FDIRRSPISIAAAVI 254
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
Y+ QL D++K +I TG+ E T+R YK+L + ++P+ Y
Sbjct: 255 YIITQLSDEKKPLRDISVATGVAEGTIRNSYKDLYPHLSKIIPAWY 300
[180][TOP]
>UniRef100_Q5V321 Transcription initiation factor IIB n=1 Tax=Haloarcula marismortui
RepID=Q5V321_HALMA
Length = 322
Score = 85.1 bits (209), Expect = 2e-15
Identities = 51/160 (31%), Positives = 88/160 (55%), Gaps = 1/160 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E +ATA L A R A PR+L E++ + V++ E+ + + +
Sbjct: 163 IYRRALGDDLLPGRSIEGVATAALYAAARMAGNPRSLDEMARVSRVEKMELTRTYRYIVR 222
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L QP + ++PRF + L L++ Q A + E + ++P+ I+AAA
Sbjct: 223 ELSLEVQPADPEH---YLPRFISDLDLSEETQRQARDLVEGARQSGMLSGKSPVGIAAAA 279
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
+Y A L +++ TQ+++ + ++EVT+R YKELLE D
Sbjct: 280 VYAAALLTNEKVTQSQVSDVADISEVTIRNRYKELLEAED 319
[181][TOP]
>UniRef100_A9A391 Transcription factor TFIIB cyclin-related n=1 Tax=Nitrosopumilus
maritimus SCM1 RepID=A9A391_NITMS
Length = 302
Score = 85.1 bits (209), Expect = 2e-15
Identities = 46/154 (29%), Positives = 83/154 (53%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+ AL + L A R+ + PRTL++I A+N+++K+I + ++L
Sbjct: 145 IYRKALEKGLVRGRSISALIASALYAACRDTETPRTLKDIGQASNIKRKDIARCYRLLLR 204
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L P+ + R + L++ + AT I + ++P+ ++AAA+
Sbjct: 205 ELNLKMPVVDPIKCIS--RIASKAGLSEKTKRKATKILQTAEENKISAGKDPMGLAAAAL 262
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKEL 466
Y+AC + KTQ ++ + G+TEVT+R YK L
Sbjct: 263 YVACVTNGENKTQRDVAEAAGVTEVTIRNRYKGL 296
[182][TOP]
>UniRef100_A3DNM2 Transcription initiation factor IIB (TFIIB) n=1 Tax=Staphylothermus
marinus F1 RepID=A3DNM2_STAMF
Length = 309
Score = 84.7 bits (208), Expect = 3e-15
Identities = 55/169 (32%), Positives = 88/169 (52%), Gaps = 4/169 (2%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
+++R +R RS+E++ A + A RE + PRTL EI+ +K+I + ++L
Sbjct: 146 RIYRRAVEKGLVRGRSIESVIAAAIYAACRELKIPRTLDEIAKHTKSSRKDIARCYRLLL 205
Query: 182 EAL----QLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISI 349
+ L Q S PI+ +PR L L+ S + A I + +P +
Sbjct: 206 KELDIKVQTSDPID------FIPRIAHALNLSGSVMKKAAEILHRARSLGVTAGNDPAGL 259
Query: 350 SAAAIYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPS 496
+AAA+Y+A QL +R+TQ EI + G+TEVT+R YKEL + LP+
Sbjct: 260 AAAAVYIAAQLSGERRTQKEIAHVAGVTEVTVRNRYKELAKELGIDLPT 308
[183][TOP]
>UniRef100_C8S977 Transcription factor TFIIB cyclin-related protein n=1
Tax=Ferroglobus placidus DSM 10642 RepID=C8S977_FERPL
Length = 346
Score = 84.7 bits (208), Expect = 3e-15
Identities = 50/159 (31%), Positives = 86/159 (54%), Gaps = 3/159 (1%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R S R R ++++ A + A REA PRTL E++ ++V ++ +G+ + L
Sbjct: 187 IYRRVVSNNLTRGRCIDSIVAAAVYAACREAGLPRTLDEVAAHSSVDKRSVGRAYRFLAR 246
Query: 185 ALQLSQ-PINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKC--FCTRRNPISISA 355
L L PI S ++P+ C L ++ QE A I +N+ R+P ++A
Sbjct: 247 TLGLKPAPITSTD---YVPKICAALGVSGEVQERALEI----VNEAEKSMVSRSPAGVAA 299
Query: 356 AAIYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
AA+Y+A L +R+TQ E+ + G+TEVT+R YK + +
Sbjct: 300 AAVYIASILLGERRTQREVAGVAGVTEVTIRNCYKMITD 338
[184][TOP]
>UniRef100_B9ZDS1 Zinc finger TFIIB-type domain protein n=1 Tax=Natrialba magadii
ATCC 43099 RepID=B9ZDS1_NATMA
Length = 329
Score = 84.7 bits (208), Expect = 3e-15
Identities = 49/164 (29%), Positives = 88/164 (53%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E +AT+ L A R+A PR+L EIS + V + E+ + + +
Sbjct: 168 IYRRALEEDLLPGRSIEGVATSSLYAAARQAGTPRSLDEISAVSRVDKMELTRTYRYIIR 227
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L + ++PRF + L L+ + +A + E + + ++P+ ++AA +
Sbjct: 228 ELGLE--VKPADPEHYVPRFVSDLDLSDETERMARELLESARQEGVHSGKSPVGLAAAGV 285
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPS 496
Y A L +++ TQ E+ ++ ++EVT+R YKELLE D P+
Sbjct: 286 YAAALLTNEKVTQNEVSEVASISEVTIRNRYKELLEASDTAAPA 329
[185][TOP]
>UniRef100_Q9HR45 Transcription initiation factor IIB 4 n=2 Tax=Halobacterium
salinarum RepID=TF2B4_HALSA
Length = 328
Score = 84.7 bits (208), Expect = 3e-15
Identities = 45/156 (28%), Positives = 87/156 (55%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E +AT+ L A R+A PR+L E++ + V + EI + + +
Sbjct: 166 IYRRALGEDLLPGRSIEGVATSALYAAARQANTPRSLDEVASVSRVDRGEIARTYRYV-- 223
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
A +LS + + ++PRFC+ L+L+ + A + + + ++P+ ++AA++
Sbjct: 224 ARELSLEVAPTDPASYVPRFCSDLELSGDVERRARDLLAAAADAGITSGKSPVGLAAASV 283
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
Y A L ++R TQ E+ + ++EVT+R Y E+L+
Sbjct: 284 YAAALLTNERVTQNEVSTVANVSEVTIRNRYHEILD 319
[186][TOP]
>UniRef100_B9RIF2 Transcription initiation factor iib, putative n=1 Tax=Ricinus
communis RepID=B9RIF2_RICCO
Length = 312
Score = 84.3 bits (207), Expect = 4e-15
Identities = 58/165 (35%), Positives = 93/165 (56%), Gaps = 9/165 (5%)
Frame = +2
Query: 35 LRNRSVEALATACLVQAIREAQEPRTLQEI-SIAANVQQKEIGKYIKILGEALQLSQPIN 211
LR R+ +A+ ACL A R+ +PRT++EI S+A +KEIG+ + + + L++ +
Sbjct: 142 LRGRNQDAVLAACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLEVELGQS 201
Query: 212 SNSISVH----MPRFCTLLQLN----KSAQELATHIGEVVINKCFCTRRNPISISAAAIY 367
++H + RFC+ L +N K+AQE E+ I RR+PISI+AA IY
Sbjct: 202 MEMGTIHAGDFLRRFCSHLGMNNQAVKAAQEAVKKSEELDI------RRSPISIAAAIIY 255
Query: 368 LACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
+ QL +++K +I TG+ E T+R YK+L ++PS Y
Sbjct: 256 MITQLSEEKKLLKDISTSTGVAEGTIRNSYKDLYPYASRIVPSWY 300
[187][TOP]
>UniRef100_B9LNI1 Transcription factor TFIIB cyclin-related n=1 Tax=Halorubrum
lacusprofundi ATCC 49239 RepID=B9LNI1_HALLT
Length = 326
Score = 84.3 bits (207), Expect = 4e-15
Identities = 50/160 (31%), Positives = 90/160 (56%), Gaps = 1/160 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E ++T+ L A R+A PR+L EI+ + V++ EI + + +
Sbjct: 165 IYRRALDEDLLPGRSIEGVSTSSLYAAARQAGTPRSLDEIAAVSRVEKDEIARTYRYVVR 224
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L+L QP + S ++PRF + L L+ A+ A + + + ++P+ ++AAA
Sbjct: 225 ELKLEIQPADPES---YVPRFASDLGLSDEAERRARSLLNTAKEQGLHSGKSPVGLAAAA 281
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
+Y A L +++ TQ+E+ + ++EVT+R Y ELLE D
Sbjct: 282 VYAASLLVNEKVTQSEVSDVANISEVTIRNRYHELLEAED 321
[188][TOP]
>UniRef100_A1RY12 Transcription initiation factor IIB (TFIIB) n=1 Tax=Thermofilum
pendens Hrk 5 RepID=A1RY12_THEPD
Length = 327
Score = 84.3 bits (207), Expect = 4e-15
Identities = 49/163 (30%), Positives = 89/163 (54%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
+++ + +R RS+E++ A + A RE + PRTL EI++ +K++ + ++L
Sbjct: 163 IYKSALDSNLVRGRSIESVMAAAVYAACREMRLPRTLDEIALYTRAGRKDVARCYRLLLR 222
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L P+ + + V PR +LL+L+ + + A I + N ++P ++AAAI
Sbjct: 223 EASLKVPLPNAADFV--PRIGSLLRLSGATIKRAMEIIDQARNAGLTAGKDPAGLAAAAI 280
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLP 493
Y+A + +TQ E+ + +TEVT+R YKEL++ D LP
Sbjct: 281 YIAALQNGEMRTQKEVARAAKVTEVTVRNRYKELVKKLDIKLP 323
[189][TOP]
>UniRef100_C1VBJ5 Transcription initiation factor IIB (TFIIB) n=1 Tax=Halogeometricum
borinquense DSM 11551 RepID=C1VBJ5_9EURY
Length = 327
Score = 84.3 bits (207), Expect = 4e-15
Identities = 49/162 (30%), Positives = 87/162 (53%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E +AT+ L A R+A PR+L E+ + V + EI + + +
Sbjct: 167 IYRRALDDDLLPGRSIEGVATSALYAAARQAGTPRSLDELETVSRVDKDEISRTYRYVVR 226
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L I ++PRF + L LN ++ A + + + ++P+ ++AAAI
Sbjct: 227 ELNLE--IEPADPEQYVPRFASELGLNDESERHARQLLRTAKEQGIHSGKSPVGLAAAAI 284
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLL 490
Y A L +++ TQ+E+ ++ ++EVT+R Y ELLE + L+
Sbjct: 285 YAASLLANEKVTQSEVSEVANISEVTIRNRYHELLEAEEQLM 326
[190][TOP]
>UniRef100_B9LTR9 Transcription factor TFIIB cyclin-related n=1 Tax=Halorubrum
lacusprofundi ATCC 49239 RepID=B9LTR9_HALLT
Length = 324
Score = 84.0 bits (206), Expect = 5e-15
Identities = 48/162 (29%), Positives = 91/162 (56%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E ++T+C+ A R A PR+L EI+ + V++ EI + + +
Sbjct: 164 IYRRALDEDLLPGRSIEGVSTSCVYAAARMAGVPRSLDEIADVSRVEKAEIARTYRYVVR 223
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L+L + ++PRF + L+L++ ++ A + K + ++P+ ++AAA+
Sbjct: 224 ELKLE--VKPADPEQYVPRFASDLELSEESEMRAKSLLRNAKEKGVHSGKSPVGLAAAAV 281
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLL 490
Y A L +++ TQA + ++ ++EVT+R Y ELLE D L+
Sbjct: 282 YAAALLTNEKTTQAAVSEVADISEVTIRNRYHELLEAEDGLV 323
[191][TOP]
>UniRef100_A7U0X6 Transcription initiation factor TFB n=1 Tax=Halorubrum sp. TP009
RepID=A7U0X6_9EURY
Length = 324
Score = 84.0 bits (206), Expect = 5e-15
Identities = 48/162 (29%), Positives = 91/162 (56%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E ++T+C+ A R A PR+L EI+ + V++ EI + + +
Sbjct: 164 IYRRALDEDLLPGRSIEGVSTSCVYAAARMAGVPRSLDEIADVSRVEKAEIARTYRYVVR 223
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L+L + ++PRF + L+L++ ++ A + K + ++P+ ++AAA+
Sbjct: 224 ELKLE--VKPADPEQYVPRFASDLELSEESEMRAKSLLRNAKEKGVHSGKSPVGLAAAAV 281
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLL 490
Y A L +++ TQA + ++ ++EVT+R Y ELLE D L+
Sbjct: 282 YAAALLTNEKTTQAAVSEVADISEVTIRNRYHELLEAEDGLV 323
[192][TOP]
>UniRef100_B6THD9 Transcription initiation factor IIB n=1 Tax=Zea mays
RepID=B6THD9_MAIZE
Length = 312
Score = 83.6 bits (205), Expect = 7e-15
Identities = 54/172 (31%), Positives = 91/172 (52%), Gaps = 5/172 (2%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEI-SIAANVQQKEIGKYIKIL 178
++F+ +R R+ +A+ ACL A R+ PRT++EI S+A +KEIG+ + +
Sbjct: 131 EIFKKIEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATKKEIGRAKEFI 190
Query: 179 GEALQLSQPINSNSISVH----MPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPIS 346
+ L++ + ++H + RFC+ L + A A V ++ RR+PIS
Sbjct: 191 VKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMTNQAVNAAKEA--VQRSEELDIRRSPIS 248
Query: 347 ISAAAIYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
I+AA IY+ QL + +K +I TG+ E T+R YK+L L+P+ Y
Sbjct: 249 IAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIPNTY 300
[193][TOP]
>UniRef100_B4FRH0 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FRH0_MAIZE
Length = 198
Score = 83.6 bits (205), Expect = 7e-15
Identities = 54/172 (31%), Positives = 91/172 (52%), Gaps = 5/172 (2%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEI-SIAANVQQKEIGKYIKIL 178
++F+ +R R+ +A+ ACL A R+ PRT++EI S+A +KEIG+ + +
Sbjct: 17 EIFKKIEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATKKEIGRAKEFI 76
Query: 179 GEALQLSQPINSNSISVH----MPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPIS 346
+ L++ + ++H + RFC+ L + A A V ++ RR+PIS
Sbjct: 77 VKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMTNQAVNAAKEA--VQRSEELDIRRSPIS 134
Query: 347 ISAAAIYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
I+AA IY+ QL + +K +I TG+ E T+R YK+L L+P+ Y
Sbjct: 135 IAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIPNTY 186
[194][TOP]
>UniRef100_Q3IRP2 Transcription initiation factor TFB 2 n=1 Tax=Natronomonas
pharaonis DSM 2160 RepID=Q3IRP2_NATPD
Length = 322
Score = 83.6 bits (205), Expect = 7e-15
Identities = 48/157 (30%), Positives = 90/157 (57%), Gaps = 1/157 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E +ATA L A ++A+ PR+L E++ + V++ EI + + +
Sbjct: 161 IYRRALDEDLLPGRSIEGVATASLYAAAKQARTPRSLDEVAKVSRVEKSEIARTYRYVVR 220
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L QP + S ++PRF + ++L+ A+ A + + + ++P+ ++AAA
Sbjct: 221 ELGLEIQPADPKS---YVPRFASDIELSDEAERRARQLLDNAQEAGVVSGKSPVGLAAAA 277
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
+Y A L +++ TQ E+ ++ ++EVT+R Y ELLE
Sbjct: 278 VYAASLLCNEKVTQKEVSEVADISEVTIRNRYHELLE 314
[195][TOP]
>UniRef100_Q701V6 Putative transcription initiation factor TFIIB n=1 Tax=uncultured
crenarchaeote RepID=Q701V6_9CREN
Length = 304
Score = 83.6 bits (205), Expect = 7e-15
Identities = 46/154 (29%), Positives = 84/154 (54%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+ AL A L A R+ + PRTL++I+ A+N+++K++ + ++L
Sbjct: 147 VYRKALEKGLVRGRSISALVAAALYAACRDTETPRTLKDIAHASNIKKKDVARCYRLLIR 206
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L P+ V R + L++ + A I + ++P+ ++AAA+
Sbjct: 207 ELDLKMPVVDPVKCV--ARIASKSGLSEKTKRKALEILKKAEQGKISAGKDPMGLAAAAL 264
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKEL 466
Y+AC + + KTQ ++ + G+TEVT+R YK L
Sbjct: 265 YVACVMNGENKTQKDVAEAAGVTEVTIRNRYKGL 298
[196][TOP]
>UniRef100_C7NVX5 Transcription factor TFIIB cyclin-related n=1 Tax=Halomicrobium
mukohataei DSM 12286 RepID=C7NVX5_HALMD
Length = 322
Score = 83.6 bits (205), Expect = 7e-15
Identities = 49/157 (31%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E +AT+ L A R+A PR+L EIS + V++ EI + + +
Sbjct: 161 IYRRALDEDLLPGRSIEGVATSSLYAAARQAGTPRSLDEISAVSRVEKDEIARTYRYVVR 220
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L QP + S ++PRF + L L+ + A + + + + ++P+ ++AA
Sbjct: 221 ELGLEIQPADPES---YVPRFASDLDLSDEVERRARQLLQNAKQQGVHSGKSPVGLAAAG 277
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
+Y A L +++ TQ+E+ ++ ++EVT+R Y ELLE
Sbjct: 278 VYAASLLTNEKVTQSEVSEVANISEVTIRNRYHELLE 314
[197][TOP]
>UniRef100_A9T0Q7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9T0Q7_PHYPA
Length = 312
Score = 83.2 bits (204), Expect = 9e-15
Identities = 52/160 (32%), Positives = 89/160 (55%), Gaps = 7/160 (4%)
Frame = +2
Query: 35 LRNRSVEALATACLVQAIREAQEPRTLQE--ISIAANVQQKEIGKYIKILGEALQLSQPI 208
+R RS +A+ ACL A R+ +PRT + S+A +K+IG+ K + + L+ I
Sbjct: 140 IRGRSQDAILAACLYIACRQEDKPRTFKAEICSVANGASKKDIGRATKFIVKQLEEDMGI 199
Query: 209 NSNSISVH----MPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLAC 376
+ ++H + RFC+ L + + AT V ++ R++PIS++AAAIY+
Sbjct: 200 SMEMGTIHAGDFLRRFCSHLNMENNEVRAATET--VKKSEMLDIRKSPISVAAAAIYMIS 257
Query: 377 QLEDK-RKTQAEICKITGLTEVTLRKVYKELLENWDDLLP 493
QL +K +K +I ++ G+ EVT+R YK+L + L+P
Sbjct: 258 QLNEKDKKALKDISRVAGVAEVTIRNSYKDLYPHAAKLIP 297
[198][TOP]
>UniRef100_Q8U2Z1 Transcription initiation factor IIB chain b homolog n=1
Tax=Pyrococcus furiosus RepID=Q8U2Z1_PYRFU
Length = 283
Score = 83.2 bits (204), Expect = 9e-15
Identities = 46/155 (29%), Positives = 85/155 (54%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
L+R+ R +E AC+ R + PRTL EI+ + ++KEI K +++
Sbjct: 119 LYREAAKRGLTRRIPIETTVAACIYATCRLFKVPRTLNEIASYSKTEKKEIMKAFRVIVR 178
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L+ + + ++ +F L+L++ + I + + +NP+S+ AAA+
Sbjct: 179 NLNLTPKMLLARPTDYVDKFADELELSERVRRRTVDILRRANEEGITSGKNPLSLVAAAL 238
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELL 469
Y+A LE +R++Q EI ++TG++E+T+R YKEL+
Sbjct: 239 YIASLLEGERRSQKEIARVTGVSEMTVRNRYKELV 273
[199][TOP]
>UniRef100_Q18H61 Transcription initiation factor TFB n=1 Tax=Haloquadratum walsbyi
DSM 16790 RepID=Q18H61_HALWD
Length = 346
Score = 83.2 bits (204), Expect = 9e-15
Identities = 48/156 (30%), Positives = 85/156 (54%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E +ATA L A R+A PR+L EI + V + E+ + + +
Sbjct: 185 IYRRALDEDLLPGRSIEGVATAALYAAARQAGTPRSLDEIERVSRVDRMELTRTYRYVVR 244
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L+L I ++PRF + L L+ ++ A + + + ++P+ ++AAA+
Sbjct: 245 ELKLE--IEPADPEQYVPRFASDLDLSDESERQARELLRNAKEEAIHSGKSPVGLAAAAV 302
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
Y A L +++ TQ E+ ++ ++EVT+R YKELLE
Sbjct: 303 YAAALLTNEKVTQNEVSEVANVSEVTIRNRYKELLE 338
[200][TOP]
>UniRef100_B3TAY3 Putative transcription factor TFIIB repeat n=1 Tax=uncultured
marine crenarchaeote HF4000_APKG8I13 RepID=B3TAY3_9ARCH
Length = 304
Score = 83.2 bits (204), Expect = 9e-15
Identities = 45/158 (28%), Positives = 85/158 (53%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+ AL + L A R+ PR L+++ AAN+++K+I + ++L +
Sbjct: 147 IYRKALDKGLVRGRSISALMASALYAACRDTSTPRNLKDVEQAANIKRKDIARCYRLLVK 206
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L P+ + V R + + + + + AT + + ++P+ ++AAA+
Sbjct: 207 ELDLHMPVTDSVQCV--ARIASKIGIQEKTKRFATKVLKRAQENEVSAGKDPMGLAAAAL 264
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENW 478
YLAC + KTQ +I + +TEVT+R YK L +++
Sbjct: 265 YLACVKNGEDKTQRDIAEAANVTEVTIRNRYKGLKDSF 302
[201][TOP]
>UniRef100_A5YS76 Transcription initiation factor TFB n=1 Tax=uncultured haloarchaeon
RepID=A5YS76_9EURY
Length = 331
Score = 83.2 bits (204), Expect = 9e-15
Identities = 47/156 (30%), Positives = 87/156 (55%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R + L RS+E +ATA L + R+A PR+L EI + V++ E+ + + +
Sbjct: 170 IYRRALAEDLLPGRSIEGVATAALYASARQAGTPRSLDEIERVSRVEKMELTRTYRYVVR 229
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L+L I ++PRF + L L+ A+ A + + + ++P+ ++AA++
Sbjct: 230 ELKLE--IEPADPEQYVPRFASDLDLSDEAERQARQLLKNAKEAAIHSGKSPVGLAAASV 287
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
Y A L +++ TQ+E+ + ++EVT+R YKELLE
Sbjct: 288 YAAALLTNEKVTQSEVSDVANVSEVTIRNRYKELLE 323
[202][TOP]
>UniRef100_C1V506 Transcription initiation factor IIB (TFIIB) n=1 Tax=Halogeometricum
borinquense DSM 11551 RepID=C1V506_9EURY
Length = 321
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/161 (30%), Positives = 89/161 (55%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E +AT+C+ A R A PR+L EIS + V++ E+ + + +
Sbjct: 160 IYRRALDDDLLPGRSIEGVATSCVYAAARMAGVPRSLDEISEVSRVEKSEVARTYRYI-- 217
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
A +LS + ++PRF + L L+ ++ A + + K + ++P+ ++AAA+
Sbjct: 218 ARELSLEVKPADPEQYVPRFGSELGLSDESKMRARQLLKNAKEKGVHSGKSPVGLAAAAV 277
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDL 487
Y A L +++ TQA + + ++EVT+R Y ELLE + L
Sbjct: 278 YAAALLTNEKTTQAAVSDVADISEVTIRNRYHELLEAEESL 318
[203][TOP]
>UniRef100_C1VD49 Transcription initiation factor IIB (TFIIB) n=1 Tax=Halogeometricum
borinquense DSM 11551 RepID=C1VD49_9EURY
Length = 338
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/156 (30%), Positives = 85/156 (54%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E +AT+ L A R+A PR+L E+ + V + E+ + + +
Sbjct: 177 IYRRALDDDLLPGRSIEGVATSALYAAARQAGTPRSLDELETVSRVDKMELTRTYRYVVR 236
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L+L I ++PRF + L L+ A+ A + + ++P+ ++AAA+
Sbjct: 237 ELKLE--IEPADPEQYVPRFASELDLSDEAERQARDLLRNAKKAGIHSGKSPVGLAAAAV 294
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
Y A L +++ TQ+E+ ++ ++EVT+R YKELLE
Sbjct: 295 YAAALLTNEKVTQSEVSEVASISEVTIRNRYKELLE 330
[204][TOP]
>UniRef100_C7P1P5 Transcription factor TFIIB cyclin-related n=1 Tax=Halomicrobium
mukohataei DSM 12286 RepID=C7P1P5_HALMD
Length = 327
Score = 82.0 bits (201), Expect = 2e-14
Identities = 48/157 (30%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E ++TA + A R+A PR+L EI + V++ EI + + +
Sbjct: 166 IYRRALDENLLPGRSIEGVSTASVYAAARQAGVPRSLDEIDEVSRVEKSEIARTYRYVVR 225
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L P + S ++PRF + L+L+ A+ A + + + + ++P+ ++AAA
Sbjct: 226 ELGLEVAPADPES---YVPRFASSLELSDEAEHRARQLLQNAKEQGVHSGKSPVGLAAAA 282
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
+Y A L +++ TQA + ++ ++EVT+R Y ELLE
Sbjct: 283 VYAAALLTNEKTTQAAVSEVADISEVTIRNRYHELLE 319
[205][TOP]
>UniRef100_Q3INP8 Transcription initiation factor TFB 5 n=1 Tax=Natronomonas
pharaonis DSM 2160 RepID=Q3INP8_NATPD
Length = 327
Score = 81.6 bits (200), Expect = 3e-14
Identities = 49/157 (31%), Positives = 86/157 (54%), Gaps = 1/157 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R S L RS+E +ATA L A R+A PR+L E+ + V + E+ + + +
Sbjct: 167 IYRRALSEDLLPGRSIEGVATAALYAAARQANVPRSLDEVEHVSRVDRMELTRTYRYIIR 226
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L QP + S ++PRF + L + + A + + + ++P+ ++AAA
Sbjct: 227 ELNLEVQPADPES---YIPRFVSDLDRSDEVERRARQLIDNAREAGVISGKSPVGLAAAA 283
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
+Y A L +++ TQ E+ ++ ++EVT+R YKELLE
Sbjct: 284 VYAASLLCNEKVTQTEVSEVAEISEVTIRNRYKELLE 320
[206][TOP]
>UniRef100_Q18JI9 Transcription initiation factor TFB n=1 Tax=Haloquadratum walsbyi
DSM 16790 RepID=Q18JI9_HALWD
Length = 346
Score = 81.3 bits (199), Expect = 3e-14
Identities = 50/161 (31%), Positives = 86/161 (53%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E +ATA L A R+A PR+L EI+ + V + EI + + +
Sbjct: 185 IYRRALDEELLPGRSIEGVATASLYAAARQAGTPRSLDEITNVSRVGRDEIARTYRYVVR 244
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L+L I ++PRF + L L+ A+ A + + + ++P+ ++AAA+
Sbjct: 245 ELKLQ--IKPADPEQYVPRFASDLDLSDEAERRARQLLRSAKEQGVHSGKSPVGLAAAAV 302
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDL 487
Y A L +++ TQ E+ + ++EVT+R Y ELLE + L
Sbjct: 303 YAASLLINEKVTQKEVSSVANISEVTIRNRYHELLEAEEQL 343
[207][TOP]
>UniRef100_A9A511 Transcription factor TFIIB cyclin-related n=1 Tax=Nitrosopumilus
maritimus SCM1 RepID=A9A511_NITMS
Length = 301
Score = 81.3 bits (199), Expect = 3e-14
Identities = 45/157 (28%), Positives = 87/157 (55%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+ AL + L A R+ + PR L+++ AAN+++K+I + ++L +
Sbjct: 144 IYRKALDKGLVRGRSISALMASALYAACRDTETPRNLKDVEQAANIKRKDIARCYRLLVK 203
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L P+ ++SI + R + + + + + A + + ++P+ ++AAA+
Sbjct: 204 ELDLKMPV-TDSIQC-VARIASRIGIAEKTKRYAVKVLKKAQENEVSAGKDPMGLAAAAL 261
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLEN 475
YL+C + KTQ +I + +TEVT+R YK L E+
Sbjct: 262 YLSCVKNGEDKTQRDIAEAANVTEVTIRNRYKGLKES 298
[208][TOP]
>UniRef100_B3TAU2 Putative transcription factor TFIIB repeat n=1 Tax=uncultured
marine crenarchaeote HF4000_APKG8G15 RepID=B3TAU2_9ARCH
Length = 300
Score = 81.3 bits (199), Expect = 3e-14
Identities = 44/157 (28%), Positives = 87/157 (55%), Gaps = 1/157 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R + ++ R++ AL + L A RE PRTL++IS N++++++ ++L
Sbjct: 145 IYRKAINKKLVKGRTISALMASALYAACREVGTPRTLKDISDTTNIKKRDLAANYRLLVN 204
Query: 185 ALQLSQPINSNSISVH-MPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L P+ + SVH + R + + +++ + +AT I +NP+S++A A
Sbjct: 205 ELDLKIPVVN---SVHNVARIASKIGISEKTKRIATEILRKAEESEISAGKNPMSLAATA 261
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
+Y++C+ + +Q ++ + +TEVT+R YK LLE
Sbjct: 262 LYISCRKTGENYSQRDLAEAASVTEVTIRNRYKGLLE 298
[209][TOP]
>UniRef100_B7XLP2 Transcription initiation factor IIB n=1 Tax=Enterocytozoon bieneusi
H348 RepID=B7XLP2_ENTBH
Length = 310
Score = 80.9 bits (198), Expect = 4e-14
Identities = 53/168 (31%), Positives = 87/168 (51%), Gaps = 1/168 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
+F+D S L+ +++E AC+ A + PRT QEIS+ V ++EIGK K++ +
Sbjct: 137 IFKDVESKKLLKGKNLEGCIGACIYIACKTEGCPRTFQEISVITVVPKREIGKCYKLISK 196
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
+ + ++SV L LN Q A +I + V + R+P SI++A I
Sbjct: 197 EMTRPESWAPQTLSVDF----APLNLNAKIQNTARYIAKKVQDIGCLAGRSPDSIASAII 252
Query: 365 YLA-CQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNYT 505
YL C D Q +I +T +T+VT+R YK+LL +++P +T
Sbjct: 253 YLTLCLYPDFLFLQKDIQYVTNVTDVTIRNTYKDLLPYKKEIIPEEFT 300
[210][TOP]
>UniRef100_Q18DU4 Transcription initiation factor TFB n=1 Tax=Haloquadratum walsbyi
DSM 16790 RepID=Q18DU4_HALWD
Length = 366
Score = 80.9 bits (198), Expect = 4e-14
Identities = 47/159 (29%), Positives = 87/159 (54%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E ++T+C+ A R A PR+L EI+ + V + E+ + + +
Sbjct: 205 IYRRALDEDLLPGRSIEGVSTSCVYAAARMAGVPRSLDEIAEVSRVPKSEVARTYRYI-- 262
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
A +LS + ++PRF + L L+ + A + + K + ++P+ ++AAA+
Sbjct: 263 ARELSLEVKPADPEQYVPRFASELGLSDESTLRARQLLQNAKEKGVHSGKSPVGLAAAAV 322
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
Y A L +++ TQA + ++ ++EVT+R Y ELLE D
Sbjct: 323 YAAALLTNEKTTQAAVSEVADISEVTIRNRYHELLEAKD 361
[211][TOP]
>UniRef100_B9ZFI9 Transcription factor TFIIB cyclin-related n=1 Tax=Natrialba magadii
ATCC 43099 RepID=B9ZFI9_NATMA
Length = 349
Score = 80.9 bits (198), Expect = 4e-14
Identities = 47/160 (29%), Positives = 88/160 (55%), Gaps = 4/160 (2%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGK----YIK 172
++R L RS+E ++TA L + R+A PR+L EI+ + V++ EI + I+
Sbjct: 189 IYRRALEEDLLPGRSIEGVSTASLYASARQAGTPRSLDEIAGVSRVEKDEIARTYRYVIR 248
Query: 173 ILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISIS 352
LG +Q + P++ ++PRF + L L+ + A + E + ++P+ ++
Sbjct: 249 ELGLEVQPADPVS------YVPRFASDLDLSDETERRARQLLETAKESGIHSGKSPVGLA 302
Query: 353 AAAIYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
AAA+Y L +++ TQ ++ ++ ++EVT+R Y ELLE
Sbjct: 303 AAAVYAGALLTNEKVTQNDVSEVASISEVTIRNRYHELLE 342
[212][TOP]
>UniRef100_O13749 Transcription initiation factor IIB n=1 Tax=Schizosaccharomyces
pombe RepID=TF2B_SCHPO
Length = 340
Score = 80.9 bits (198), Expect = 4e-14
Identities = 56/170 (32%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
QL++ L+ +S +++ AC+ A R+ + PRT EI NV +KEIG+ K L
Sbjct: 144 QLYKRVDDHKALKGKSSQSIIAACIYIACRQGKVPRTFMEICTLTNVPKKEIGRVYKTLQ 203
Query: 182 -------------EALQLSQPINSNSISVH--MPRFCTLLQLNKSAQELATHIGEVVINK 316
+AL+ + I S+S S M RFC L L S Q A + +
Sbjct: 204 RMLTEGGALHNSVDALKGHEYIQSSSTSAEDLMVRFCNRLMLPMSVQSAAAELARRAGLQ 263
Query: 317 CFCTRRNPISISAAAIYLACQLEDKRKTQAEICKITGLTEVTLRKVYKEL 466
R+PISI+A+ IY+ L KT EI ++TG+++ T+R YK L
Sbjct: 264 GTLAGRSPISIAASGIYMISALMGYPKTPKEISEVTGVSDSTIRIAYKLL 313
[213][TOP]
>UniRef100_A8MCX6 Transcription initiation factor IIB n=1 Tax=Caldivirga
maquilingensis IC-167 RepID=TF2B_CALMQ
Length = 336
Score = 80.9 bits (198), Expect = 4e-14
Identities = 48/163 (29%), Positives = 87/163 (53%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
+++ + ++ RSVEA+ ACL A R PR+L EIS +KEI + +++
Sbjct: 174 VYKQVLKSGLVKGRSVEAIIAACLHMACRMQGMPRSLDEISQYTRAPRKEIARCFRLIAR 233
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L++ P++ ++P+ L+L + A + E +K ++P ++AAA+
Sbjct: 234 ELRIRLPLSDPR--QYVPKIVEQLKLPGDIAKEAIRVLEEAKDKGLTAGKDPAGLAAAAV 291
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLP 493
Y+A L+ + +TQ EI + +TEVT+R YKEL + + +P
Sbjct: 292 YIASLLKGEVRTQKEIAQAAQVTEVTVRNRYKELAKELNIKIP 334
[214][TOP]
>UniRef100_A0RX88 Transcription initiation factor TFIIB n=1 Tax=Cenarchaeum symbiosum
RepID=A0RX88_CENSY
Length = 328
Score = 80.5 bits (197), Expect = 6e-14
Identities = 44/148 (29%), Positives = 79/148 (53%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+ L ACL A R + PRTL +I+ N+++K++ + +++
Sbjct: 172 IYRKAMEKKLVRGRSIHGLVAACLYAACRNTETPRTLDDIAKGINIRRKDVARCYRLIFR 231
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L+L P+ V R ++ +LN+ + A I + ++P+ I+AAA+
Sbjct: 232 ELELKMPVVDPVKGV--SRIASIAELNERTKRRAITILDQAKKLGMVAGKDPMGIAAAAL 289
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLR 448
YLAC + K+Q +I +G+TEVT+R
Sbjct: 290 YLACIGSGEAKSQKDISLASGVTEVTIR 317
[215][TOP]
>UniRef100_Q977R7 Transcription factor TFIIB n=1 Tax=uncultured crenarchaeote 4B7
RepID=Q977R7_9ARCH
Length = 211
Score = 80.5 bits (197), Expect = 6e-14
Identities = 43/148 (29%), Positives = 82/148 (55%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R ++ RS++ L AC+ A R+ + PRTL +++ N+++K++ + +++
Sbjct: 52 IYRKAIEKKLVKGRSIQGLVAACVYAACRDTETPRTLGDVANGINIRRKDVARCYRLIFR 111
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L P+ ++ I+ +PR + + L + + A I ++P ++AAA+
Sbjct: 112 ELDLKVPV-ADPIN-GIPRIASSIGLGEKTKRKAVEILRKAKKIGVVAGKDPTGLAAAAL 169
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLR 448
YLAC E KTQ EI + +G+TEVT+R
Sbjct: 170 YLACITEGGNKTQKEISEASGVTEVTIR 197
[216][TOP]
>UniRef100_B3T3N6 Putative transcription factor TFIIB repeat n=1 Tax=uncultured
marine crenarchaeote HF4000_ANIW133C7 RepID=B3T3N6_9ARCH
Length = 304
Score = 80.5 bits (197), Expect = 6e-14
Identities = 44/154 (28%), Positives = 83/154 (53%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+ AL + L A R+ + PR L+++ AAN+++K+I + ++L +
Sbjct: 149 IYRKALDKGLVRGRSISALMASALYAACRDTETPRNLKDVEQAANIKRKDIARCYRLLIK 208
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L P+ + V R + + + + + A + ++ ++P+ ++AAA+
Sbjct: 209 ELDLHLPVTDSVQCV--ARIASQIGIQEKTKRHAIKVLKLAQKNEISAGKDPMGLAAAAL 266
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKEL 466
YLAC + KTQ +I + +TEVT+R YK L
Sbjct: 267 YLACVKNGEDKTQRDIAEAANVTEVTIRNRYKGL 300
[217][TOP]
>UniRef100_B6JY64 Transcription factor TFIIB n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6JY64_SCHJY
Length = 339
Score = 80.1 bits (196), Expect = 8e-14
Identities = 58/170 (34%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKIL- 178
QLF+ L+ +S +++ AC+ A R+ + PRT EI NV +KEIG+ K L
Sbjct: 144 QLFKRVDDHKALKGKSSQSIIAACIYIACRQGKVPRTFMEICTLTNVAKKEIGRVYKTLQ 203
Query: 179 -----GEALQLS-------QPINSNSISVH--MPRFCTLLQLNKSAQELATHIGEVVINK 316
G AL S + I ++S S M RFC LQL Q A + +
Sbjct: 204 RMLTEGGALHNSVDAFKGQEYIQNSSTSAEDLMVRFCNRLQLPTFVQLAAAELARRAGQE 263
Query: 317 CFCTRRNPISISAAAIYLACQLEDKRKTQAEICKITGLTEVTLRKVYKEL 466
R+PISI+A+ IY+ L KT EI ++TG+++ T+R YK L
Sbjct: 264 GTLAGRSPISIAASGIYMISSLMGYPKTPKEISEVTGVSDSTIRIAYKLL 313
[218][TOP]
>UniRef100_C7NMQ0 Transcription factor TFIIB cyclin-related n=1 Tax=Halorhabdus
utahensis DSM 12940 RepID=C7NMQ0_HALUD
Length = 323
Score = 80.1 bits (196), Expect = 8e-14
Identities = 48/157 (30%), Positives = 90/157 (57%), Gaps = 1/157 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R L RS+E ++TA + A R+A PR+L E++ + V++ EI + + +
Sbjct: 162 IYRRALDEDLLPGRSIEGVSTASVYAAARQAGVPRSLDELTDVSRVEKDEIARTYRYVVR 221
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L +P + S ++PRF + L+L++ A+ A + + + ++P+ ++AAA
Sbjct: 222 ELGLEVRPADPES---YVPRFTSDLELSEEAERRARELLANAKEEGVHSGKSPVGLAAAA 278
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
IY A L +++ TQA + ++ ++EVT+R Y ELLE
Sbjct: 279 IYAASLLTNEKTTQAAVSEVADISEVTIRNRYHELLE 315
[219][TOP]
>UniRef100_B3T5K7 Putative transcription factor TFIIB repeat n=1 Tax=uncultured
marine crenarchaeote HF4000_ANIW141J13
RepID=B3T5K7_9ARCH
Length = 305
Score = 80.1 bits (196), Expect = 8e-14
Identities = 43/157 (27%), Positives = 86/157 (54%), Gaps = 1/157 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R + ++ R++ +L + L A RE PRTL++IS N++++++ ++L
Sbjct: 148 IYRKAINKKLVKGRTISSLMASALYAACREVGTPRTLKDISDTTNIKKRDLASNYRLLVN 207
Query: 185 ALQLSQPINSNSISVH-MPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L L P+ SVH + R + + +++ + LAT + +NP+S++A A
Sbjct: 208 ELDLKIPVVD---SVHNVARIASKIGISEKTKRLATELLRKAEESELTAGKNPMSLAATA 264
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
+Y++C+ + +Q ++ + +TEVT+R YK LLE
Sbjct: 265 LYISCRKTGENYSQRDLAEAASVTEVTIRNRYKGLLE 301
[220][TOP]
>UniRef100_A8NYV2 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8NYV2_COPC7
Length = 662
Score = 79.7 bits (195), Expect = 1e-13
Identities = 52/160 (32%), Positives = 79/160 (49%), Gaps = 7/160 (4%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
QL++ LR + VEA+ AC+ A R+A PRT +EI V +K +G+ K L
Sbjct: 472 QLYKRADEEKLLRGKPVEAVIAACIFIACRKAHVPRTFREICNLTRVSKKMLGQCYKALE 531
Query: 182 EALQLSQPIN-------SNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNP 340
++L LS P + + + R+C L L + Q + + I N R+P
Sbjct: 532 QSLNLSGPESMPLANTPTTGPEKLLVRYCNHLDLPANVQAICSEIIVNARNHGIADGRSP 591
Query: 341 ISISAAAIYLACQLEDKRKTQAEICKITGLTEVTLRKVYK 460
ISI+ AIY C L K K EI + G++E T++ VY+
Sbjct: 592 ISIAGGAIYFTCLLLGKPKPIREISAVAGVSEGTIKLVYR 631
[221][TOP]
>UniRef100_B1L6Y1 Transcription factor TFIIB cyclin-related n=1 Tax=Candidatus
Korarchaeum cryptofilum OPF8 RepID=B1L6Y1_KORCO
Length = 356
Score = 79.3 bits (194), Expect = 1e-13
Identities = 48/155 (30%), Positives = 80/155 (51%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
L+R A ++ RS++A+ A + A R P+TL+EIS +++KEIG+ + L
Sbjct: 167 LYRMAARAGLVKGRSMDAMVAAVIYAACRRTDVPKTLEEISKFFALEEKEIGRSFRFLFR 226
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L + P V++ + L L + A I ++ R P+ ++AAA+
Sbjct: 227 KLGIQIPPPKPENFVYL--IASKLSLPEEVATQAIRIIKIAKRNGATMGREPVGVAAAAV 284
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELL 469
Y+ACQ +TQ E+ + +TEVT+R YKEL+
Sbjct: 285 YMACQELGLHRTQRELAQAANVTEVTVRNRYKELI 319
[222][TOP]
>UniRef100_Q9YGA5 Transcription initiation factor IIB 2 n=1 Tax=Haloferax volcanii
RepID=TFB2_HALVO
Length = 332
Score = 79.3 bits (194), Expect = 1e-13
Identities = 48/162 (29%), Positives = 86/162 (53%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R + L RS+E +AT+ L + R A PR+L E+ + V + E+ + + +
Sbjct: 171 IYRRALNDDLLPGRSIEGVATSALYASARMAGTPRSLDELEKVSRVDKMELTRTYRYIVR 230
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L+L I ++PRF + L L+ A+ A + + ++P+ ++AAA+
Sbjct: 231 ELKLE--IKPADPEQYVPRFASELGLSDEAERQARQLLRDAKETGIHSGKSPVGLAAAAV 288
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLL 490
Y A L +++ TQ+E+ + ++EVT+R YKELLE D L
Sbjct: 289 YAAALLTNEKVTQSEVSTVADISEVTIRNRYKELLEVQDGTL 330
[223][TOP]
>UniRef100_A8P2D9 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8P2D9_COPC7
Length = 340
Score = 79.0 bits (193), Expect = 2e-13
Identities = 44/153 (28%), Positives = 75/153 (49%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
QL++ LR + +EA+ AC+ A R+A PR+ ++I +V +K +G+ K+L
Sbjct: 158 QLYKRTDEEKLLRGKPLEAVIAACIFIACRQAHVPRSFKDICSLTHVSKKMLGQCYKVLE 217
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
A S+ + R+C L L + Q + + R+P+SI+ A
Sbjct: 218 RAFTQVGAAPSSGPEGFLVRYCNYLDLPPNVQGICRDVIVAAREHGIADSRSPLSIAGGA 277
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYK 460
IY C L +T EI ++ G+TE T++ VY+
Sbjct: 278 IYFCCMLLGHTRTLREISQVAGVTETTIQSVYR 310
[224][TOP]
>UniRef100_B8D3B4 Transcription initiation factor IIB (TFIIB) n=1 Tax=Desulfurococcus
kamchatkensis 1221n RepID=B8D3B4_DESK1
Length = 319
Score = 79.0 bits (193), Expect = 2e-13
Identities = 47/155 (30%), Positives = 84/155 (54%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
+++R+ +R RS+E++ A + A RE + PR+L EI+ V +KEI + ++L
Sbjct: 158 RIYRNAVEKGIVRGRSIESIIAATIYLACREMKVPRSLDEITRHTRVNRKEIARCYRLLL 217
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L + + + ++PR L L A ++A I + ++P ++AAA
Sbjct: 218 RELHIK--VTTTDPVDYVPRIVHGLGLPGQAVKIAIEIINKAKEQGVTGGKDPAGLAAAA 275
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKEL 466
+Y+A + +++TQ EI + G+TEVT+R YKEL
Sbjct: 276 VYIAAEQLGEKRTQKEIAHVAGVTEVTVRNRYKEL 310
[225][TOP]
>UniRef100_B9ZG34 Transcription factor TFIIB cyclin-related n=1 Tax=Natrialba magadii
ATCC 43099 RepID=B9ZG34_NATMA
Length = 317
Score = 79.0 bits (193), Expect = 2e-13
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 1/160 (0%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E +AT+ L A R+ PR+L+E++ + V Q+EIG+ + + +
Sbjct: 156 IYRRALEQDLIRGRSIEGVATSALYTACRKEGIPRSLEEVTSVSRVDQREIGRTYRYIAD 215
Query: 185 ALQLS-QPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L ++ +P N +PRFC+ L ++K + A I + + + ++P +AAA
Sbjct: 216 ELDINLEPTNPRQF---VPRFCSELDVSKEVETRAVEIIDQTTDLGLHSGKSPTGFAAAA 272
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWD 481
IY A L D+ Q + T VT+R Y+E L+ D
Sbjct: 273 IYAAGLLCDETIPQRAVADTAQTTVVTVRNRYREQLDAID 312
[226][TOP]
>UniRef100_B0CXM4 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0CXM4_LACBS
Length = 349
Score = 77.8 bits (190), Expect = 4e-13
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 8/161 (4%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
QL++ LR + +EA+ AC+ A R+A PRT +EI +V +K +G+ K L
Sbjct: 158 QLYKRSDEEKLLRGKPLEAVIAACIFIACRQAHVPRTFREICDLTHVSKKILGQCYKALE 217
Query: 182 EALQLSQPINSNSISVH--------MPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRN 337
+A L+ ++ S + + R+C L L + Q + + I R+
Sbjct: 218 QAFNLTPGASAAHASNNPATGPENLLVRYCNHLDLPPNVQSICSDIIVAARKHGIADGRS 277
Query: 338 PISISAAAIYLACQLEDKRKTQAEICKITGLTEVTLRKVYK 460
P+SI+ AIY C L K K+ +I + G++E T+R VY+
Sbjct: 278 PVSIAGGAIYFTCYLLGKNKSPRDISAVAGVSEGTIRLVYR 318
[227][TOP]
>UniRef100_Q6E6D9 Transcription initiation factor TFIIB n=1 Tax=Antonospora locustae
RepID=Q6E6D9_ANTLO
Length = 306
Score = 77.4 bits (189), Expect = 5e-13
Identities = 48/154 (31%), Positives = 87/154 (56%), Gaps = 1/154 (0%)
Frame = +2
Query: 38 RNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGEALQLSQPINSN 217
+++S + AC+ A R+ PRT +EIS+ V +K+IG+ KI+ L+ ++
Sbjct: 142 KSKSHKGTVAACIYIACRQEGCPRTFKEISVLTAVPRKDIGRAYKIIYPHLEKFVAVSVK 201
Query: 218 SISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRK 397
I + RFC+ L L A++LA I + V T ++ SI+AA +YL + + K
Sbjct: 202 DI---VSRFCSNLDLGHDAEKLAVAIAQNVQRLDILTGKSTDSIAAAIVYLVTNVFSQHK 258
Query: 398 TQAEICKIT-GLTEVTLRKVYKELLENWDDLLPS 496
+ + + T +T+VT++ VYKEL+ + ++++PS
Sbjct: 259 SMQKFLQNTSNVTDVTIKNVYKELVLHKEEVIPS 292
[228][TOP]
>UniRef100_Q8TXP2 Transcription initiation factor IIB n=1 Tax=Methanopyrus kandleri
RepID=Q8TXP2_METKA
Length = 341
Score = 77.0 bits (188), Expect = 6e-13
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 33/190 (17%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
+++R +R RS+E A A L A ++ + PRT++EI+ + K+I + ++L
Sbjct: 138 RIYRKAVEKDLVRGRSIENTAAAALFMACKKRKHPRTIKEIAKLFGITPKDINRTHRVL- 196
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L++ + + ++ RF T L +++ + LA I E K RNP ++ AA
Sbjct: 197 -LRHLNERMPAPDPKQYLSRFATELGVSEDVEMLAREILEKAEKKGLTVSRNPAGLAGAA 255
Query: 362 IYLACQLEDK---------------------------------RKTQAEICKITGLTEVT 442
+YLA L+ K R+TQ E+ KI+G+TEVT
Sbjct: 256 LYLAGLLKAKEYIEEYREKMKEAESEEEKEKLERELNEKLRTCRRTQPEVAKISGVTEVT 315
Query: 443 LRKVYKELLE 472
+R YKEL E
Sbjct: 316 IRNRYKELAE 325
[229][TOP]
>UniRef100_A9A3F1 Transcription factor TFIIB cyclin-related n=1 Tax=Nitrosopumilus
maritimus SCM1 RepID=A9A3F1_NITMS
Length = 315
Score = 77.0 bits (188), Expect = 6e-13
Identities = 41/148 (27%), Positives = 80/148 (54%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS++ L ACL + R + PRTL +++ N+++K++ + +++
Sbjct: 158 IYRKAMEKKLVRGRSIQGLVAACLYASCRNTETPRTLDDVAKGINIRRKDVARCYRLIFR 217
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L+L P+ V R ++ +L++ ++ A I ++P+ I+AAA+
Sbjct: 218 ELELKMPVVDPVKGV--SRIASIAELSEKSKRKAIAILNEAKKMGVVAGKDPMGIAAAAL 275
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLR 448
YLAC + K+Q +I +G+TEVT+R
Sbjct: 276 YLACISTGEVKSQKDISIASGVTEVTIR 303
[230][TOP]
>UniRef100_A3MTP4 Transcription initiation factor IIB (TFIIB) n=1 Tax=Pyrobaculum
calidifontis JCM 11548 RepID=A3MTP4_PYRCJ
Length = 331
Score = 77.0 bits (188), Expect = 6e-13
Identities = 47/155 (30%), Positives = 79/155 (50%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
+++R +R RSVEA+A A L A R + PR L E+ ++E+ + ++L
Sbjct: 168 EIYRQALEKELVRGRSVEAMAAAALYMACRMLKMPRPLDELVRYTKASRREVARCYRLLL 227
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L + PI+ + ++ R L+L+ A +LA I + ++P ++AAA
Sbjct: 228 RELNVKVPISDPVL--YISRIAEQLKLSGEAIKLAIDILQKAKKAGITAGKDPAGLAAAA 285
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKEL 466
+Y+A + KTQ + G+TEVT+R YKEL
Sbjct: 286 VYIASLMLGDNKTQKDFAVAAGVTEVTVRNRYKEL 320
[231][TOP]
>UniRef100_A0RYS6 Transcription initiation factor TFIIB n=1 Tax=Cenarchaeum symbiosum
RepID=A0RYS6_CENSY
Length = 303
Score = 77.0 bits (188), Expect = 6e-13
Identities = 45/156 (28%), Positives = 80/156 (51%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+ AL A L A R + PRTL +++ N+++K++ + ++L
Sbjct: 146 IYRKALDKGLVRGRSILALIAAALYAACRNTETPRTLTDVANGINIKRKDVARCYRLLLR 205
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L P+ M R + L++ + A + ++P+ ++AAA+
Sbjct: 206 ELDLKMPVIDPIKG--MSRIASKAGLSEKTKRKAHEYLKEANRIEVSAGKDPMGLAAAAL 263
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
YLAC + + KTQ ++ + G+TEVT+R YK L E
Sbjct: 264 YLACVIIGENKTQKDVAQAAGVTEVTIRNRYKGLKE 299
[232][TOP]
>UniRef100_A9A2J7 Transcription factor TFIIB cyclin-related n=1 Tax=Nitrosopumilus
maritimus SCM1 RepID=A9A2J7_NITMS
Length = 306
Score = 76.6 bits (187), Expect = 8e-13
Identities = 44/154 (28%), Positives = 87/154 (56%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R ++ RS+ +L ACL A RE++ PRTL+E++ + +++KEI +++ +
Sbjct: 151 IYRKALEKKLVKGRSIASLVAACLYAACRESEAPRTLREVAASIGIKRKEISATYRLIFK 210
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L P+ +S+S + + + +L++ + A I + + ++P+ ++A+A+
Sbjct: 211 ELDLKMPV-IDSVSC-IAKIASNAELSEKTKRYAIKILKKAEKQNMSAGKHPMGLAASAL 268
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKEL 466
YLA ++ +TQ EI G+TEVT+R K L
Sbjct: 269 YLASIDLEEFRTQKEIADAAGITEVTVRNRCKGL 302
[233][TOP]
>UniRef100_Q649S4 Transcription initiation factor IIB n=1 Tax=uncultured archaeon
GZfos34G5 RepID=Q649S4_9ARCH
Length = 306
Score = 76.3 bits (186), Expect = 1e-12
Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 2/166 (1%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
L+R ++ RS+E L +A L R+ PRTL+E++ + K+I + L
Sbjct: 132 LYRKAMKRGLIKGRSIEELVSAMLYITCRQYGVPRTLKEMAEVSRSPLKKIRRAYIFLLR 191
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L++ + + ++PRFC+ L L+ +E A I + PI +AAAI
Sbjct: 192 RLEIK--LAPADPARYIPRFCSKLGLSAEIREKAMVILQDDDGTGMAKGWGPIGTAAAAI 249
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE--NWDDLLPS 496
Y+A L + +T+ EI K+ G TE+T+R YKEL++ N D L PS
Sbjct: 250 YIATVLSGEYRTEKEIAKVAGTTEITIRDRYKELVKRLNIDVLSPS 295
[234][TOP]
>UniRef100_Q2Y4T6 Probable transcription initiation factor IIB n=1 Tax=uncultured
archaeon RepID=Q2Y4T6_9ARCH
Length = 306
Score = 76.3 bits (186), Expect = 1e-12
Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 2/166 (1%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
L+R ++ RS+E L +A L R+ PRTL+E++ + K+I + L
Sbjct: 132 LYRKAMKRGLIKGRSIEELVSAMLYITCRQYGVPRTLKEMAEVSRSPLKKIRRAYIFLLR 191
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L++ + + ++PRFC+ L L+ +E A I + PI +AAAI
Sbjct: 192 RLEIK--LAPADPARYIPRFCSKLGLSAEIREKAMVILQDDDGTGMAKGWGPIGTAAAAI 249
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE--NWDDLLPS 496
Y+A L + +T+ EI K+ G TE+T+R YKEL++ N D L PS
Sbjct: 250 YIATVLSGEYRTEKEIAKVAGTTEITIRDRYKELVKRLNIDVLSPS 295
[235][TOP]
>UniRef100_A0RYR8 Transcription initiation factor TFIIB n=1 Tax=Cenarchaeum symbiosum
RepID=A0RYR8_CENSY
Length = 303
Score = 75.9 bits (185), Expect = 1e-12
Identities = 44/157 (28%), Positives = 85/157 (54%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+ AL + L A R+ PR L+++ AAN+++K+I + ++L +
Sbjct: 146 IYRKALDKGLVRGRSISALMASALYAACRDTATPRNLKDVEEAANIKRKDIARCYRLLVK 205
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L L P+ ++SI + R + + + + + A + + ++P+ ++AAA+
Sbjct: 206 ELDLRMPV-TDSIQC-VARISSHIGIAEKTKRYAVVVLKEAQKHEVSAGKDPMGLAAAAL 263
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLEN 475
YL+C + KTQ +I +TEVT+R YK L ++
Sbjct: 264 YLSCVKNGEDKTQRDIADAANVTEVTIRNRYKGLKDS 300
[236][TOP]
>UniRef100_A1RV37 Transcription initiation factor IIB n=1 Tax=Pyrobaculum islandicum
DSM 4184 RepID=TF2B_PYRIL
Length = 333
Score = 75.9 bits (185), Expect = 1e-12
Identities = 46/164 (28%), Positives = 81/164 (49%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
+++R +R RSVEA+A A L A R + PR L E+ ++E+ + ++L
Sbjct: 170 EIYRQALEKELVRGRSVEAMAAAALYMACRMMKMPRPLDELVRYTKASRREVARCYRLLL 229
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L + PI+ + ++ R L+L+ + A I + ++P ++AAA
Sbjct: 230 RELNVKVPISDPVL--YISRIAEQLKLSGEVVKTAIEILQKAKKAGITAGKDPAGLAAAA 287
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLP 493
+Y+A L +TQ + G+TEVT+R YKEL + + +P
Sbjct: 288 VYIASLLHGDNRTQKDFAVAAGVTEVTVRNRYKELAKTLNIKVP 331
[237][TOP]
>UniRef100_B9IEI3 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IEI3_POPTR
Length = 311
Score = 75.5 bits (184), Expect = 2e-12
Identities = 52/163 (31%), Positives = 88/163 (53%), Gaps = 9/163 (5%)
Frame = +2
Query: 35 LRNRSVEALATACLVQAIREAQEPRTLQEI-SIAANVQQKEIGKYIKILGEALQLSQPIN 211
L+ R+ +A+ ACL A R+ + RT++EI S+ +KEIG+ + + + L++ +
Sbjct: 142 LKGRNQDAILAACLYIACRQENKARTVKEICSVVNGTTKKEIGRAKEFIVKHLEVEMGHS 201
Query: 212 SNSISVH----MPRFCTLL----QLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIY 367
++H + RFC+ L Q K+A E E+ I RR+PISI+AA IY
Sbjct: 202 MEMGTIHAADYLRRFCSNLGMTNQAVKAAHEAVQKSEELDI------RRSPISIAAAVIY 255
Query: 368 LACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPS 496
+ QL D +K +I +T + E T++ YK+L + ++PS
Sbjct: 256 IIIQLSDDKKPLKDISVVTQVAEGTIKNSYKDLSPHLSQIIPS 298
[238][TOP]
>UniRef100_B3V5X6 Intein-containing transcription factor TFIIB cyclin-related protein
n=1 Tax=uncultured marine crenarchaeote AD1000-202-A2
RepID=B3V5X6_9ARCH
Length = 307
Score = 75.1 bits (183), Expect = 2e-12
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 4/152 (2%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R ++ RS+ L AC+ A R + PRTL +I+ N+++K++ + +I+
Sbjct: 152 IYRKAIERKLVKGRSIHGLVAACIYAACRITETPRTLDDIAEGINIKRKDVARSYRIIFR 211
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKC----FCTRRNPISIS 352
L L P+ V R +L L ++ + A +++NK ++P+ I+
Sbjct: 212 ELDLKIPVADPVKGV--SRIASLAGLGEATKRKAL----ILLNKAKKIGMVAGKDPMGIA 265
Query: 353 AAAIYLACQLEDKRKTQAEICKITGLTEVTLR 448
AAA+YLAC KTQ EI +G+TEVT+R
Sbjct: 266 AAALYLACISTGGNKTQKEISIASGVTEVTIR 297
[239][TOP]
>UniRef100_B1YCX0 Transcription initiation factor IIB n=1 Tax=Thermoproteus
neutrophilus V24Sta RepID=TF2B_THENV
Length = 333
Score = 75.1 bits (183), Expect = 2e-12
Identities = 44/155 (28%), Positives = 78/155 (50%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
+++R +R RSVEA+A A L A R + PR L E+ ++E+ + ++L
Sbjct: 170 EIYRQALEKELVRGRSVEAMAAAALYMACRMMKMPRPLDELVRYTKASRREVARCYRLLL 229
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L + PI+ ++ ++ R L+L+ + A I + ++P ++AAA
Sbjct: 230 RELNVKVPISDPTL--YISRIAEQLKLSGEVVKTAIDILQKAKKAGITAGKDPAGLAAAA 287
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKEL 466
+Y+A + +TQ + G+TEVT+R YKEL
Sbjct: 288 VYIASLMHGDNRTQKDFAVAAGVTEVTVRNRYKEL 322
[240][TOP]
>UniRef100_A9RXM3 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RXM3_PHYPA
Length = 312
Score = 74.7 bits (182), Expect = 3e-12
Identities = 47/171 (27%), Positives = 91/171 (53%), Gaps = 7/171 (4%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQE--ISIAANVQQKEIGKYIKI 175
+++++ RNRS EA+ +CL A R+ +PRT +E S++ + + G+ K
Sbjct: 129 EIYKNVVDLKLTRNRSHEAILASCLYIACRQEDKPRTFKEEICSVSNGASKTDTGRITKK 188
Query: 176 LGEALQLSQPINSNSISVH----MPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPI 343
L + ++ I+ ++H RFC+ L + K+ T V ++ R+P+
Sbjct: 189 LVKQIEKGMGISMEMGTIHAGDFSRRFCSHLDMEKNEVRAITE--TVKKSEMLVIGRSPL 246
Query: 344 SISAAAIYLACQLEDK-RKTQAEICKITGLTEVTLRKVYKELLENWDDLLP 493
S++AAAI++ QL +K +K +I ++ G+ E ++R +Y+EL + L+P
Sbjct: 247 SVAAAAIFMISQLNEKDKKELKDISRVAGVNEESIRFMYRELYPHASKLIP 297
[241][TOP]
>UniRef100_Q5KFF3 Transcription initiation factor iib, putative n=1
Tax=Filobasidiella neoformans RepID=Q5KFF3_CRYNE
Length = 447
Score = 74.7 bits (182), Expect = 3e-12
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 12/167 (7%)
Frame = +2
Query: 26 ATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGEALQLSQP 205
A ++ ++ A+ AC+V A R+A+ RT QE+ A + +KE+G+ + +Q S
Sbjct: 245 ARAIKGKNEPAVIAACIVYACRDAKVHRTFQEVCKALKISKKELGQVFNHVKSVVQ-SSS 303
Query: 206 INSNSISVH------------MPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISI 349
+ +SVH + RF L L + ++ HI + K R+P+SI
Sbjct: 304 AQGSMVSVHGSNNAQESAEGLLGRFANYLDLGNAVFNVSKHIAGEAVAKSAIDGRSPVSI 363
Query: 350 SAAAIYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLL 490
+A +Y C L K T +I + G++E T + + K + DD++
Sbjct: 364 AAGVLYFTCVLLGKSTTAKDISAMGGVSESTTKLITKMVASKLDDVI 410
[242][TOP]
>UniRef100_Q5KFF2 Transcription initiation factor iib, putative n=1
Tax=Filobasidiella neoformans RepID=Q5KFF2_CRYNE
Length = 371
Score = 74.7 bits (182), Expect = 3e-12
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 12/167 (7%)
Frame = +2
Query: 26 ATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGEALQLSQP 205
A ++ ++ A+ AC+V A R+A+ RT QE+ A + +KE+G+ + +Q S
Sbjct: 169 ARAIKGKNEPAVIAACIVYACRDAKVHRTFQEVCKALKISKKELGQVFNHVKSVVQ-SSS 227
Query: 206 INSNSISVH------------MPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISI 349
+ +SVH + RF L L + ++ HI + K R+P+SI
Sbjct: 228 AQGSMVSVHGSNNAQESAEGLLGRFANYLDLGNAVFNVSKHIAGEAVAKSAIDGRSPVSI 287
Query: 350 SAAAIYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLL 490
+A +Y C L K T +I + G++E T + + K + DD++
Sbjct: 288 AAGVLYFTCVLLGKSTTAKDISAMGGVSESTTKLITKMVASKLDDVI 334
[243][TOP]
>UniRef100_Q55QR3 Putative uncharacterized protein n=1 Tax=Filobasidiella neoformans
RepID=Q55QR3_CRYNE
Length = 371
Score = 74.7 bits (182), Expect = 3e-12
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 12/167 (7%)
Frame = +2
Query: 26 ATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGEALQLSQP 205
A ++ ++ A+ AC+V A R+A+ RT QE+ A + +KE+G+ + +Q S
Sbjct: 169 ARAIKGKNEPAVIAACIVYACRDAKVHRTFQEVCKALKISKKELGQVFNHVKSVVQ-SSS 227
Query: 206 INSNSISVH------------MPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISI 349
+ +SVH + RF L L + ++ HI + K R+P+SI
Sbjct: 228 AQGSMVSVHGSNNAQESAEGLLGRFANYLDLGNAVFNVSKHIAGEAVAKSAIDGRSPVSI 287
Query: 350 SAAAIYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLL 490
+A +Y C L K T +I + G++E T + + K + DD++
Sbjct: 288 AAGVLYFTCVLLGKSTTAKDISAMGGVSESTTKLITKMVASKLDDVI 334
[244][TOP]
>UniRef100_Q9HRE6 Transcription initiation factor IIB 2 n=2 Tax=Halobacterium
salinarum RepID=TF2B2_HALSA
Length = 325
Score = 74.7 bits (182), Expect = 3e-12
Identities = 42/156 (26%), Positives = 84/156 (53%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R S L RS+E +ATA L + R+ PR++ E++ + + + E + + +
Sbjct: 166 IYRRALSEDLLPGRSIEGVATAALYASARQLSTPRSIDEVANVSRIDEMEFKRTYRYI-- 223
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
+LS + + ++PRF + L L + + + + ++P+ ++AAAI
Sbjct: 224 VRELSLEVAPADPAQYVPRFASDLDLPDEVERRSRELISNAQADGVTSGKSPVGLAAAAI 283
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
Y + L + + TQ+E+ ++T ++EVT+R Y+ELLE
Sbjct: 284 YASSLLTNHKVTQSEVSEVTDVSEVTIRNRYQELLE 319
[245][TOP]
>UniRef100_A9A3E3 Transcription factor TFIIB cyclin-related n=1 Tax=Nitrosopumilus
maritimus SCM1 RepID=A9A3E3_NITMS
Length = 303
Score = 74.3 bits (181), Expect = 4e-12
Identities = 46/156 (29%), Positives = 80/156 (51%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
LFR + L RS + A + R PRTLQ+++ A NV +K I + + L
Sbjct: 142 LFRKIAAKKILAGRSTAGILCAAIYITCRMTNTPRTLQDVANAGNVNKKNIQRTYRFLAR 201
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L ++ I + V R + +++ + LA I ++ +NP++++AAA
Sbjct: 202 ELDITPEIYHPTEFV--TRIAKAVDISEKTERLAFRILDLSARNGVLESKNPMAMAAAAT 259
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLE 472
YLA D+R +Q +I K++G++ VT+R KE+L+
Sbjct: 260 YLASVKNDERISQLKISKVSGISAVTIRDRTKEILK 295
[246][TOP]
>UniRef100_A2BIX1 Transcription initiation factor IIB n=1 Tax=Hyperthermus butylicus
DSM 5456 RepID=A2BIX1_HYPBU
Length = 318
Score = 74.3 bits (181), Expect = 4e-12
Identities = 47/164 (28%), Positives = 86/164 (52%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E++A A + A R PR++ +I+ +KE+ + +++
Sbjct: 156 IYRQAAEKGLVRGRSLESMAAAAVYAACRIRGIPRSIDDIAELVKGGRKEVARCYRLIVR 215
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L+L PI ++ R + L+L+ + ++ A I ++P ++AAAI
Sbjct: 216 ELRLRMPIVDPVR--YVSRITSALRLSPAVEKRAAEILIRARKMGLTAGKDPAGLAAAAI 273
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPS 496
Y+A +R+TQ EI G+TEVT+R YKEL++ + LP+
Sbjct: 274 YIAALELGERRTQKEIAAAAGVTEVTVRNRYKELVQKLNITLPA 317
[247][TOP]
>UniRef100_Q977X4 Transcription initiation factor IIB n=1 Tax=Pyrodictium occultum
RepID=TF2B_PYROC
Length = 310
Score = 74.3 bits (181), Expect = 4e-12
Identities = 47/164 (28%), Positives = 85/164 (51%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R +R RS+E++A A + A R PR++ +I+ +KE+ + +++
Sbjct: 148 IYRQAAEKGLVRGRSLESMAAAAVYAACRIRGIPRSIDDIAEVVKGGRKEVARCYRLIVR 207
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAI 364
L+L PI ++ R + L+L+ + + A I ++P ++AAAI
Sbjct: 208 ELKLRMPIVDPVR--YVSRIVSALRLSPAVERRAAEILVQARKMGLTAGKDPAGLAAAAI 265
Query: 365 YLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPS 496
Y+A +R+TQ EI G+TEVT+R YKEL++ + LP+
Sbjct: 266 YIAALELGERRTQKEIAAAAGVTEVTVRNRYKELVQKLNIPLPA 309
[248][TOP]
>UniRef100_B6KL20 Transcription initiation factor IIB, putative n=3 Tax=Toxoplasma
gondii RepID=B6KL20_TOXGO
Length = 464
Score = 73.9 bits (180), Expect = 5e-12
Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 12/168 (7%)
Frame = +2
Query: 35 LRNRSVEALATACLVQAIREAQEPRTLQEISIAAN-VQQKEIGKYIKILGEALQLSQPIN 211
LR RS A A REA RT++E+ + + +KE+GK I + + L +N
Sbjct: 270 LRTRSNTTTMLAITYLACREAGVTRTVKELVVYDRAISEKELGKAINRIKKLLPQRGGVN 329
Query: 212 S-NSISVHMPRFCTLLQLNKSAQELATHIGE-----VVINKCFCTRRNPISISAAAIYLA 373
S S + +PR+C+ LQL+ ++A H+ + ++ + R P S++AAAI+L
Sbjct: 330 SAESATQLLPRYCSRLQLSMHVADVAEHVAKRATQVIISSHRHVLARRPNSVAAAAIWLV 389
Query: 374 CQLEDKRKTQ-----AEICKITGLTEVTLRKVYKELLENWDDLLPSNY 502
+L + +EI +TG E TLR +YK++L+ + LLP +
Sbjct: 390 VKLLNSSTNPNLPKASEIASVTGAGEHTLRSIYKDMLDVAEHLLPREF 437
[249][TOP]
>UniRef100_B3V5M5 Intein-containing transcription factor TFIIB cyclin-related protein
n=1 Tax=uncultured marine crenarchaeote KM3-34-D9
RepID=B3V5M5_9ARCH
Length = 307
Score = 73.9 bits (180), Expect = 5e-12
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 4/152 (2%)
Frame = +2
Query: 5 LFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGE 184
++R ++ RS+ L AC+ + R + PRTL +I+ N+++K++ + +I+
Sbjct: 152 IYRKAIERKLVKGRSIHGLVAACIYASCRMTETPRTLDDIAEGINIKRKDVARSYRIIFR 211
Query: 185 ALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKC----FCTRRNPISIS 352
L L P+ V R +L L ++ + A +++NK ++P+ I+
Sbjct: 212 ELDLKIPVADPVKGV--SRIASLAGLGEATKRKAL----ILLNKAKKIGMVAGKDPMGIA 265
Query: 353 AAAIYLACQLEDKRKTQAEICKITGLTEVTLR 448
AAA+YLAC KTQ EI +G+TEVT+R
Sbjct: 266 AAALYLACISTGGSKTQKEISIASGVTEVTIR 297
[250][TOP]
>UniRef100_Q8ZWS3 Transcription initiation factor IIB n=1 Tax=Pyrobaculum aerophilum
RepID=TF2B_PYRAE
Length = 333
Score = 73.9 bits (180), Expect = 5e-12
Identities = 44/155 (28%), Positives = 77/155 (49%)
Frame = +2
Query: 2 QLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILG 181
+++R +R RSVEA+A A L A R + PR L E+ ++E+ + ++L
Sbjct: 170 EIYRQALEKELVRGRSVEAMAAAALYMACRMMKMPRPLDELVRYTKASRREVARCYRLLL 229
Query: 182 EALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAA 361
L + PI+ + ++ R L+L+ + A I + ++P ++AAA
Sbjct: 230 RELNVKVPISDPIL--YISRIAEQLKLSGEVVKTAIDILQKAKKAGITAGKDPAGLAAAA 287
Query: 362 IYLACQLEDKRKTQAEICKITGLTEVTLRKVYKEL 466
+Y+A + +TQ + G+TEVT+R YKEL
Sbjct: 288 VYIASLMHGDNRTQKDFAVAAGVTEVTVRNRYKEL 322